Search to RefSeqBP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-012612
(1865 letters)
Database: RefSeq49_BP.fasta
33,088 sequences; 17,681,374 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001193274.1| protein disulfide-isomerase A6 [Bos taurus]. 761 0.0
Alignment gi|XP_002691152.1| PREDICTED: PDIA6 protein-like [Bos taurus]. 731 0.0
Alignment gi|XP_589324.4| PREDICTED: PDIA6 protein-like [Bos taurus]. 731 0.0
Alignment gi|NP_001039344.1| protein disulfide-isomerase A4 precursor [Bo... 137 4e-32
Alignment gi|NP_001092591.1| DnaJ (Hsp40) homolog, subfamily C, member 10... 117 5e-26
Alignment gi|XP_002698560.1| PREDICTED: DnaJ (Hsp40) homolog, subfamily C... 117 5e-26
Alignment gi|XP_590020.1| PREDICTED: DnaJ (Hsp40) homolog, subfamily C, m... 117 5e-26
Alignment gi|NP_001193661.1| thioredoxin domain-containing protein 5 [Bos... 116 8e-26
Alignment gi|NP_776758.2| protein disulfide-isomerase A3 precursor [Bos t... 112 1e-24
Alignment gi|NP_001039556.1| protein disulfide-isomerase A5 precursor [Bo... 107 3e-23
>ref|NP_001193274.1| protein disulfide-isomerase A6 [Bos taurus].
Length = 440
Score = 761 bits (1965), Expect = 0.0
Identities = 375/421 (89%), Positives = 383/421 (90%)
Frame = +3
Query: 111 MARLVLGLMSCTLFVAVNGLYSSSDDVIELTPSNFNREVIQSDSLWLVEFYAPWCGHCQR 290
MARLVLGLMSCTLF+ VNGLYSSSDDVIELTPSNFNREVIQSDSLWLVEFYAPWCGHCQR
Sbjct: 1 MARLVLGLMSCTLFITVNGLYSSSDDVIELTPSNFNREVIQSDSLWLVEFYAPWCGHCQR 60
Query: 291 LTPEWKKVATXXXXXXXXXXXXXXXHQSLGGQYGVQGFPTIKIFGSNKNRPEDYQGGRTG 470
LTPEWKK AT HQSLGGQYGVQGFPTIKIFGSNKN+PEDYQGGRTG
Sbjct: 61 LTPEWKKAATALKDVVKVGAVDADKHQSLGGQYGVQGFPTIKIFGSNKNKPEDYQGGRTG 120
Query: 471 EAIVDAALSALRQLVKDXXXXXXXXXXXXXXXXXEGSGKKDVIELTDDTFDKNVLDSEDV 650
EAIVDAALSALRQLVKD + S KKDVIELTDD FDKNVLDSEDV
Sbjct: 121 EAIVDAALSALRQLVKDRLGGRGSGYSSGKQGRGDSSSKKDVIELTDDNFDKNVLDSEDV 180
Query: 651 WMVEFYAPWCGHCKNLEPEWAAAATEVKEQTKGKVKLAAVDATVNQVLASRYGIRGFPTI 830
WMVEFYAPWCGHCKNLEPEWAAAATEVKEQTKGKVKLAAVDATVNQVLASRYGIRGFPTI
Sbjct: 181 WMVEFYAPWCGHCKNLEPEWAAAATEVKEQTKGKVKLAAVDATVNQVLASRYGIRGFPTI 240
Query: 831 KIFQKGESPVDYDGGRTRSDIVTRALDLFSDNAPPPELLEIISEDVAKKSCEEHQLCVVA 1010
KIFQKGESPVDYDGGRTRSDIV+RALDLFSDNAPPPELLEII+EDVAKK+CEEHQLCVVA
Sbjct: 241 KIFQKGESPVDYDGGRTRSDIVSRALDLFSDNAPPPELLEIINEDVAKKTCEEHQLCVVA 300
Query: 1011 VLPHILDTGAAGRNSYLEVLLKLADKYKKKMWGWLWTEAGAQTELEHALGIGGFGYPAMA 1190
VLPHILDTGAAGRNSYLEVLLKLADKYKKKMWGWLWTEAGAQ+ELE+ALGIGGFGYPAMA
Sbjct: 301 VLPHILDTGAAGRNSYLEVLLKLADKYKKKMWGWLWTEAGAQSELENALGIGGFGYPAMA 360
Query: 1191 AINARKMKFALLKGSFSEQGINEFLRELSFGRGSTAPVGGGAFPAISTREPWDGKDGELP 1370
AINARKMKFALLKGSFSEQGINEFLRELSFGRGSTAPVGGGAFP ISTREPWDGKDGELP
Sbjct: 361 AINARKMKFALLKGSFSEQGINEFLRELSFGRGSTAPVGGGAFPTISTREPWDGKDGELP 420
Query: 1371 V 1373
V
Sbjct: 421 V 421
>ref|XP_002691152.1| PREDICTED: PDIA6 protein-like [Bos taurus].
Length = 440
Score = 731 bits (1888), Expect = 0.0
Identities = 362/421 (85%), Positives = 375/421 (89%)
Frame = +3
Query: 111 MARLVLGLMSCTLFVAVNGLYSSSDDVIELTPSNFNREVIQSDSLWLVEFYAPWCGHCQR 290
MARLVLGLMSCTLF+ VN LYSSSDDVIELTPSNFNREVIQS SLWLVEFYAPWCGHCQR
Sbjct: 1 MARLVLGLMSCTLFITVNRLYSSSDDVIELTPSNFNREVIQSYSLWLVEFYAPWCGHCQR 60
Query: 291 LTPEWKKVATXXXXXXXXXXXXXXXHQSLGGQYGVQGFPTIKIFGSNKNRPEDYQGGRTG 470
LTPEWKK AT HQSLGGQ+GVQGFPTIKIFGSNKN+PEDYQGG TG
Sbjct: 61 LTPEWKKAATALKDVVKVGAVDADKHQSLGGQHGVQGFPTIKIFGSNKNKPEDYQGGGTG 120
Query: 471 EAIVDAALSALRQLVKDXXXXXXXXXXXXXXXXXEGSGKKDVIELTDDTFDKNVLDSEDV 650
EAIVDAALSAL QLVK+ + S KKDVIELTDD FDKNVLDSEDV
Sbjct: 121 EAIVDAALSALCQLVKERLGGRGRGYSSGKQGRGDSSSKKDVIELTDDNFDKNVLDSEDV 180
Query: 651 WMVEFYAPWCGHCKNLEPEWAAAATEVKEQTKGKVKLAAVDATVNQVLASRYGIRGFPTI 830
WMVEFYAPWCGHCKNLEPEWAAAATEVKEQTKGKVKLAAVDA+VNQVLASRYGIRGFPTI
Sbjct: 181 WMVEFYAPWCGHCKNLEPEWAAAATEVKEQTKGKVKLAAVDASVNQVLASRYGIRGFPTI 240
Query: 831 KIFQKGESPVDYDGGRTRSDIVTRALDLFSDNAPPPELLEIISEDVAKKSCEEHQLCVVA 1010
KIFQKGESPVDYDGGR RSDIV+RALDLFSDNAPPPELLEII+EDVAKK+CEEHQLCVVA
Sbjct: 241 KIFQKGESPVDYDGGRRRSDIVSRALDLFSDNAPPPELLEIINEDVAKKTCEEHQLCVVA 300
Query: 1011 VLPHILDTGAAGRNSYLEVLLKLADKYKKKMWGWLWTEAGAQTELEHALGIGGFGYPAMA 1190
V+PHILDTGAAGRNSYLEVLLKLADKYKKKMWGWLWTEAGAQ+E E+ LGIG FGYPAMA
Sbjct: 301 VVPHILDTGAAGRNSYLEVLLKLADKYKKKMWGWLWTEAGAQSEPENTLGIGEFGYPAMA 360
Query: 1191 AINARKMKFALLKGSFSEQGINEFLRELSFGRGSTAPVGGGAFPAISTREPWDGKDGELP 1370
AINAR+MKFALLKGSFSEQGINEFLRELSFGRGSTAPVGGGAFP ISTREPWDGKDGELP
Sbjct: 361 AINAREMKFALLKGSFSEQGINEFLRELSFGRGSTAPVGGGAFPTISTREPWDGKDGELP 420
Query: 1371 V 1373
V
Sbjct: 421 V 421
>ref|XP_589324.4| PREDICTED: PDIA6 protein-like [Bos taurus].
Length = 440
Score = 731 bits (1888), Expect = 0.0
Identities = 362/421 (85%), Positives = 375/421 (89%)
Frame = +3
Query: 111 MARLVLGLMSCTLFVAVNGLYSSSDDVIELTPSNFNREVIQSDSLWLVEFYAPWCGHCQR 290
MARLVLGLMSCTLF+ VN LYSSSDDVIELTPSNFNREVIQS SLWLVEFYAPWCGHCQR
Sbjct: 1 MARLVLGLMSCTLFITVNRLYSSSDDVIELTPSNFNREVIQSYSLWLVEFYAPWCGHCQR 60
Query: 291 LTPEWKKVATXXXXXXXXXXXXXXXHQSLGGQYGVQGFPTIKIFGSNKNRPEDYQGGRTG 470
LTPEWKK AT HQSLGGQ+GVQGFPTIKIFGSNKN+PEDYQGG TG
Sbjct: 61 LTPEWKKAATALKDVVKVGAVDADKHQSLGGQHGVQGFPTIKIFGSNKNKPEDYQGGGTG 120
Query: 471 EAIVDAALSALRQLVKDXXXXXXXXXXXXXXXXXEGSGKKDVIELTDDTFDKNVLDSEDV 650
EAIVDAALSAL QLVK+ + S KKDVIELTDD FDKNVLDSEDV
Sbjct: 121 EAIVDAALSALCQLVKERLGGRGRGYSSGKQGRGDSSSKKDVIELTDDNFDKNVLDSEDV 180
Query: 651 WMVEFYAPWCGHCKNLEPEWAAAATEVKEQTKGKVKLAAVDATVNQVLASRYGIRGFPTI 830
WMVEFYAPWCGHCKNLEPEWAAAATEVKEQTKGKVKLAAVDA+VNQVLASRYGIRGFPTI
Sbjct: 181 WMVEFYAPWCGHCKNLEPEWAAAATEVKEQTKGKVKLAAVDASVNQVLASRYGIRGFPTI 240
Query: 831 KIFQKGESPVDYDGGRTRSDIVTRALDLFSDNAPPPELLEIISEDVAKKSCEEHQLCVVA 1010
KIFQKGESPVDYDGGR RSDIV+RALDLFSDNAPPPELLEII+EDVAKK+CEEHQLCVVA
Sbjct: 241 KIFQKGESPVDYDGGRRRSDIVSRALDLFSDNAPPPELLEIINEDVAKKTCEEHQLCVVA 300
Query: 1011 VLPHILDTGAAGRNSYLEVLLKLADKYKKKMWGWLWTEAGAQTELEHALGIGGFGYPAMA 1190
V+PHILDTGAAGRNSYLEVLLKLADKYKKKMWGWLWTEAGAQ+E E+ LGIG FGYPAMA
Sbjct: 301 VVPHILDTGAAGRNSYLEVLLKLADKYKKKMWGWLWTEAGAQSEPENTLGIGEFGYPAMA 360
Query: 1191 AINARKMKFALLKGSFSEQGINEFLRELSFGRGSTAPVGGGAFPAISTREPWDGKDGELP 1370
AINAR+MKFALLKGSFSEQGINEFLRELSFGRGSTAPVGGGAFP ISTREPWDGKDGELP
Sbjct: 361 AINAREMKFALLKGSFSEQGINEFLRELSFGRGSTAPVGGGAFPTISTREPWDGKDGELP 420
Query: 1371 V 1373
V
Sbjct: 421 V 421
>ref|NP_001039344.1| protein disulfide-isomerase A4 precursor [Bos taurus].
Length = 643
Score = 137 bits (344), Expect = 4e-32
Identities = 90/253 (35%), Positives = 128/253 (50%), Gaps = 3/253 (1%)
Frame = +3
Query: 189 VIELTPSNFNREVIQSDSLWLVEFYAPWCGHCQRLTPEWKKVATXXXXXXXXXXXXXXXH 368
V+ L +NF+ V D++ L+EFYAPWCGHC++ PE++K+A
Sbjct: 63 VLILNDANFDNFVADKDTV-LLEFYAPWCGHCKQFAPEYEKIAATLKENDPPIPVAKIDA 121
Query: 369 QS---LGGQYGVQGFPTIKIFGSNKNRPEDYQGGRTGEAIVDAALSALRQLVKDXXXXXX 539
S L ++ V G+PTIKI K + DY+G RT E IV VK+
Sbjct: 122 TSESALASRFDVSGYPTIKIL--KKGQEVDYEGSRTQEEIVAK--------VKEVSQPNW 171
Query: 540 XXXXXXXXXXXEGSGKKDVIELTDDTFDKNVLDSEDVWMVEFYAPWCGHCKNLEPEWAAA 719
+ LT D FD+ V D+ D+ +VEFYAPWCGHCK L PE+ A
Sbjct: 172 TPPPEV------------TLVLTKDNFDEVVNDA-DIILVEFYAPWCGHCKKLAPEYEKA 218
Query: 720 ATEVKEQTKGKVKLAAVDATVNQVLASRYGIRGFPTIKIFQKGESPVDYDGGRTRSDIVT 899
A E+ + + + LA VDA LA R+ + +PT+KIF+KG++ Y+G R + IV
Sbjct: 219 AKELSKSSP-PIPLAKVDAIAETDLAKRFDVSSYPTLKIFRKGKA-FSYNGPREKYGIV- 275
Query: 900 RALDLFSDNAPPP 938
D + + PP
Sbjct: 276 ---DYMMEQSGPP 285
Score = 107 bits (266), Expect = 5e-23
Identities = 54/125 (43%), Positives = 79/125 (63%), Gaps = 1/125 (0%)
Frame = +3
Query: 594 VIELTDDTFDKNVLDSEDVWMVEFYAPWCGHCKNLEPEWAAAATEVKEQTKGKVKLAAVD 773
V+ L D FD V D + V ++EFYAPWCGHCK PE+ A +KE + +A +D
Sbjct: 63 VLILNDANFDNFVADKDTV-LLEFYAPWCGHCKQFAPEYEKIAATLKENDP-PIPVAKID 120
Query: 774 ATVNQVLASRYGIRGFPTIKIFQKGESPVDYDGGRTRSDIVTRALDLFSDN-APPPELLE 950
AT LASR+ + G+PTIKI +KG+ VDY+G RT+ +IV + ++ N PPPE+
Sbjct: 121 ATSESALASRFDVSGYPTIKILKKGQE-VDYEGSRTQEEIVAKVKEVSQPNWTPPPEVTL 179
Query: 951 IISED 965
++++D
Sbjct: 180 VLTKD 184
Score = 76.3 bits (186), Expect = 9e-14
Identities = 38/101 (37%), Positives = 56/101 (55%), Gaps = 2/101 (1%)
Frame = +3
Query: 579 SGKKDVIELTDDTFDKNVLDSEDVWMVEFYAPWCGHCKNLEPEWAAAATEVKEQTKGKVK 758
+ K V + TFD V+D + ++EFYAPWCGHCK LEP + + + K +
Sbjct: 520 NNKGPVKVVVGKTFDSIVMDPKKDVLIEFYAPWCGHCKQLEPVYTSLGKKYKGHK--NLV 577
Query: 759 LAAVDATVNQVLASRYGIRGFPTIKIFQKGE--SPVDYDGG 875
+A +DAT N V + RY + GFPTI G+ P+ ++ G
Sbjct: 578 IAKMDATANDVTSDRYKVEGFPTIYFAPSGDKKKPIKFEDG 618
>ref|NP_001092591.1| DnaJ (Hsp40) homolog, subfamily C, member 10 [Bos taurus].
Length = 793
Score = 117 bits (292), Expect = 5e-26
Identities = 70/223 (31%), Positives = 101/223 (45%), Gaps = 6/223 (2%)
Frame = +3
Query: 189 VIELTPSNFNREVIQS--DSLWLVEFYAPWCGHCQRLTPEWKKVATXXXXXXXXXXXXXX 362
VI LTP+ FN V Q D +W+V+FY+PWC CQ L PEWK++A
Sbjct: 558 VISLTPTTFNELVKQRKHDGVWMVDFYSPWCHPCQVLMPEWKRMARTLIGLINVGSIDCQ 617
Query: 363 XHQSLGGQYGVQGFPTIKIFGSNKNRPEDYQG----GRTGEAIVDAALSALRQLVKDXXX 530
+ S Q V+ +P I+ F N+ +Y R ++ L L Q
Sbjct: 618 QYHSFCAQENVRRYPEIRFFPQKSNKAYEYHSYNGWNRDAYSLRIWGLGFLPQAS----- 672
Query: 531 XXXXXXXXXXXXXXEGSGKKDVIELTDDTFDKNVLDSEDVWMVEFYAPWCGHCKNLEPEW 710
I+LT TF++ VL ++ W+V+FYAPWCG C+N PE+
Sbjct: 673 ----------------------IDLTPQTFNEKVLQGKNHWVVDFYAPWCGPCQNFAPEF 710
Query: 711 AAAATEVKEQTKGKVKLAAVDATVNQVLASRYGIRGFPTIKIF 839
A + KGKVK VD + GIR +PT++++
Sbjct: 711 ELLARTL----KGKVKAGKVDCQAYAQTCQKAGIRAYPTVRLY 749
Score = 96.3 bits (238), Expect = 8e-20
Identities = 65/234 (27%), Positives = 100/234 (42%), Gaps = 3/234 (1%)
Frame = +3
Query: 174 SSSDDVIELTPSNFNREVIQSDSLWLVEFYAPWCGHCQRLTPEWKKVATXXXXXXXXXXX 353
S + V L P NF + WLV+F+APWC CQ L PE +K +
Sbjct: 450 SVNSHVTTLGPQNFPANEKEP---WLVDFFAPWCPPCQALLPELRKASKHLYGQLKFGTL 506
Query: 354 XXXXHQSLGGQYGVQGFPTIKIFGSNKNRPEDYQGGRTGEAIVDAALSALRQLVKDXXXX 533
H+ L Y +Q +PT +F N++ +Y+G + E I+ + V+D
Sbjct: 507 DCTVHEGLCNMYNIQAYPTTVVF--NQSNIHEYEGHHSAEQIL--------EFVEDLM-- 554
Query: 534 XXXXXXXXXXXXXEGSGKKDVIELTDDTFDKNVLD--SEDVWMVEFYAPWCGHCKNLEPE 707
VI LT TF++ V + VWMV+FY+PWC C+ L PE
Sbjct: 555 -----------------NPSVISLTPTTFNELVKQRKHDGVWMVDFYSPWCHPCQVLMPE 597
Query: 708 WAAAATEVKEQTKGKVKLAAVDATVNQVLASRYGIRGFPTIKIF-QKGESPVDY 866
W A + G + + ++D ++ +R +P I+ F QK +Y
Sbjct: 598 WKRMARTL----IGLINVGSIDCQQYHSFCAQENVRRYPEIRFFPQKSNKAYEY 647
Score = 67.0 bits (162), Expect = 5e-11
Identities = 34/106 (32%), Positives = 59/106 (55%)
Frame = +3
Query: 591 DVIELTDDTFDKNVLDSEDVWMVEFYAPWCGHCKNLEPEWAAAATEVKEQTKGKVKLAAV 770
++I L FD V +S ++W V FY+P C HC +L P W A EV G +++ AV
Sbjct: 130 EIITLDRREFDAAV-NSGELWFVNFYSPGCSHCHDLAPTWRDFAKEV----DGLLRIGAV 184
Query: 771 DATVNQVLASRYGIRGFPTIKIFQKGESPVDYDGGRTRSDIVTRAL 908
+ +++L G+ +P++ IF+ G + V Y G R++ ++ A+
Sbjct: 185 NCGDDRMLCRMKGVNSYPSLFIFRSGMAAVKYHGDRSKESLMNFAM 230
Score = 59.3 bits (142), Expect = 1e-08
Identities = 34/119 (28%), Positives = 53/119 (44%)
Frame = +3
Query: 165 GLYSSSDDVIELTPSNFNREVIQSDSLWLVEFYAPWCGHCQRLTPEWKKVATXXXXXXXX 344
G+Y ++I L F+ V S LW V FY+P C HC L P W+ A
Sbjct: 123 GIYDDDPEIITLDRREFDAAV-NSGELWFVNFYSPGCSHCHDLAPTWRDFAKEVDGLLRI 181
Query: 345 XXXXXXXHQSLGGQYGVQGFPTIKIFGSNKNRPEDYQGGRTGEAIVDAALSALRQLVKD 521
+ L GV +P++ IF S + Y G R+ E++++ A+ +R V +
Sbjct: 182 GAVNCGDDRMLCRMKGVNSYPSLFIFRSGMAAVK-YHGDRSKESLMNFAMQHVRSTVTE 239
Score = 57.4 bits (137), Expect = 4e-08
Identities = 28/95 (29%), Positives = 52/95 (54%)
Frame = +3
Query: 636 DSEDVWMVEFYAPWCGHCKNLEPEWAAAATEVKEQTKGKVKLAAVDATVNQVLASRYGIR 815
+ ++ W+V+F+APWC C+ L PE A+ + G++K +D TV++ L + Y I+
Sbjct: 466 NEKEPWLVDFFAPWCPPCQALLPELRKAS----KHLYGQLKFGTLDCTVHEGLCNMYNIQ 521
Query: 816 GFPTIKIFQKGESPVDYDGGRTRSDIVTRALDLFS 920
+PT +F + +Y+G + I+ DL +
Sbjct: 522 AYPTTVVFNQSNIH-EYEGHHSAEQILEFVEDLMN 555
>ref|XP_002698560.1| PREDICTED: DnaJ (Hsp40) homolog, subfamily C, member 10-like [Bos
taurus].
Length = 793
Score = 117 bits (292), Expect = 5e-26
Identities = 70/223 (31%), Positives = 101/223 (45%), Gaps = 6/223 (2%)
Frame = +3
Query: 189 VIELTPSNFNREVIQS--DSLWLVEFYAPWCGHCQRLTPEWKKVATXXXXXXXXXXXXXX 362
VI LTP+ FN V Q D +W+V+FY+PWC CQ L PEWK++A
Sbjct: 558 VISLTPTTFNELVKQRKHDEVWMVDFYSPWCHPCQILMPEWKRMARTLIGLINVGSIDCQ 617
Query: 363 XHQSLGGQYGVQGFPTIKIFGSNKNRPEDYQG----GRTGEAIVDAALSALRQLVKDXXX 530
+ S Q V+ +P I+ F N+ +Y R ++ L L Q
Sbjct: 618 QYHSFCAQENVRRYPEIRFFPQKSNKAYEYHSYNGWNRDAYSLRIWGLGFLPQAS----- 672
Query: 531 XXXXXXXXXXXXXXEGSGKKDVIELTDDTFDKNVLDSEDVWMVEFYAPWCGHCKNLEPEW 710
I+LT TF++ VL ++ W+V+FYAPWCG C+N PE+
Sbjct: 673 ----------------------IDLTPQTFNEKVLQGKNHWVVDFYAPWCGPCQNFAPEF 710
Query: 711 AAAATEVKEQTKGKVKLAAVDATVNQVLASRYGIRGFPTIKIF 839
A + KGKVK VD + GIR +PT++++
Sbjct: 711 ELLARTL----KGKVKAGKVDCQAYAQTCQKAGIRAYPTVRLY 749
Score = 95.9 bits (237), Expect = 1e-19
Identities = 64/234 (27%), Positives = 101/234 (43%), Gaps = 3/234 (1%)
Frame = +3
Query: 174 SSSDDVIELTPSNFNREVIQSDSLWLVEFYAPWCGHCQRLTPEWKKVATXXXXXXXXXXX 353
S + V L P NF + WLV+F+APWC C+ L PE +K +
Sbjct: 450 SVNSHVTTLGPQNFPANEKEP---WLVDFFAPWCPPCRALLPELRKASKHLYGQLKFGTL 506
Query: 354 XXXXHQSLGGQYGVQGFPTIKIFGSNKNRPEDYQGGRTGEAIVDAALSALRQLVKDXXXX 533
H+ L Y +Q +PT +F N++ +Y+G + E I+ + V+D
Sbjct: 507 DCTIHEGLCNMYNIQAYPTTVVF--NQSNIHEYEGHHSAEQIL--------EFVEDLM-- 554
Query: 534 XXXXXXXXXXXXXEGSGKKDVIELTDDTFDKNVLD--SEDVWMVEFYAPWCGHCKNLEPE 707
VI LT TF++ V ++VWMV+FY+PWC C+ L PE
Sbjct: 555 -----------------NPSVISLTPTTFNELVKQRKHDEVWMVDFYSPWCHPCQILMPE 597
Query: 708 WAAAATEVKEQTKGKVKLAAVDATVNQVLASRYGIRGFPTIKIF-QKGESPVDY 866
W A + G + + ++D ++ +R +P I+ F QK +Y
Sbjct: 598 WKRMARTL----IGLINVGSIDCQQYHSFCAQENVRRYPEIRFFPQKSNKAYEY 647
Score = 64.3 bits (155), Expect = 4e-10
Identities = 33/106 (31%), Positives = 58/106 (54%)
Frame = +3
Query: 591 DVIELTDDTFDKNVLDSEDVWMVEFYAPWCGHCKNLEPEWAAAATEVKEQTKGKVKLAAV 770
++I L FD V +S ++W V FY+P C HC +L P W A V G +++ AV
Sbjct: 130 EIITLDRREFDAAV-NSGELWFVNFYSPGCSHCHDLAPTWRDFAKVV----DGLLRIGAV 184
Query: 771 DATVNQVLASRYGIRGFPTIKIFQKGESPVDYDGGRTRSDIVTRAL 908
+ +++L G+ +P++ IF+ G + V Y G R++ ++ A+
Sbjct: 185 NCGDDRMLCRMKGVNSYPSLFIFRSGMAAVKYHGDRSKESLMNFAM 230
Score = 59.3 bits (142), Expect = 1e-08
Identities = 34/119 (28%), Positives = 53/119 (44%)
Frame = +3
Query: 165 GLYSSSDDVIELTPSNFNREVIQSDSLWLVEFYAPWCGHCQRLTPEWKKVATXXXXXXXX 344
G+Y ++I L F+ V S LW V FY+P C HC L P W+ A
Sbjct: 123 GIYDDDPEIITLDRREFDAAV-NSGELWFVNFYSPGCSHCHDLAPTWRDFAKVVDGLLRI 181
Query: 345 XXXXXXXHQSLGGQYGVQGFPTIKIFGSNKNRPEDYQGGRTGEAIVDAALSALRQLVKD 521
+ L GV +P++ IF S + Y G R+ E++++ A+ +R V +
Sbjct: 182 GAVNCGDDRMLCRMKGVNSYPSLFIFRSGMAAVK-YHGDRSKESLMNFAMQHVRSTVTE 239
Score = 58.2 bits (139), Expect = 3e-08
Identities = 33/125 (26%), Positives = 64/125 (51%), Gaps = 12/125 (9%)
Frame = +3
Query: 582 GKK---DVIELTDDTFDKNVL---------DSEDVWMVEFYAPWCGHCKNLEPEWAAAAT 725
GKK D++ L ++ + +V + ++ W+V+F+APWC C+ L PE A+
Sbjct: 436 GKKILYDILALAKESVNSHVTTLGPQNFPANEKEPWLVDFFAPWCPPCRALLPELRKAS- 494
Query: 726 EVKEQTKGKVKLAAVDATVNQVLASRYGIRGFPTIKIFQKGESPVDYDGGRTRSDIVTRA 905
+ G++K +D T+++ L + Y I+ +PT +F + +Y+G + I+
Sbjct: 495 ---KHLYGQLKFGTLDCTIHEGLCNMYNIQAYPTTVVFNQSNIH-EYEGHHSAEQILEFV 550
Query: 906 LDLFS 920
DL +
Sbjct: 551 EDLMN 555
>ref|XP_590020.1| PREDICTED: DnaJ (Hsp40) homolog, subfamily C, member 10-like isoform
2 [Bos taurus].
Length = 793
Score = 117 bits (292), Expect = 5e-26
Identities = 70/223 (31%), Positives = 101/223 (45%), Gaps = 6/223 (2%)
Frame = +3
Query: 189 VIELTPSNFNREVIQS--DSLWLVEFYAPWCGHCQRLTPEWKKVATXXXXXXXXXXXXXX 362
VI LTP+ FN V Q D +W+V+FY+PWC CQ L PEWK++A
Sbjct: 558 VISLTPTTFNELVKQRKHDEVWMVDFYSPWCHPCQILMPEWKRMARTLIGLINVGSIDCQ 617
Query: 363 XHQSLGGQYGVQGFPTIKIFGSNKNRPEDYQG----GRTGEAIVDAALSALRQLVKDXXX 530
+ S Q V+ +P I+ F N+ +Y R ++ L L Q
Sbjct: 618 QYHSFCAQENVRRYPEIRFFPQKSNKAYEYHSYNGWNRDAYSLRIWGLGFLPQAS----- 672
Query: 531 XXXXXXXXXXXXXXEGSGKKDVIELTDDTFDKNVLDSEDVWMVEFYAPWCGHCKNLEPEW 710
I+LT TF++ VL ++ W+V+FYAPWCG C+N PE+
Sbjct: 673 ----------------------IDLTPQTFNEKVLQGKNHWVVDFYAPWCGPCQNFAPEF 710
Query: 711 AAAATEVKEQTKGKVKLAAVDATVNQVLASRYGIRGFPTIKIF 839
A + KGKVK VD + GIR +PT++++
Sbjct: 711 ELLARTL----KGKVKAGKVDCQAYAQTCQKAGIRAYPTVRLY 749
Score = 95.9 bits (237), Expect = 1e-19
Identities = 64/234 (27%), Positives = 101/234 (43%), Gaps = 3/234 (1%)
Frame = +3
Query: 174 SSSDDVIELTPSNFNREVIQSDSLWLVEFYAPWCGHCQRLTPEWKKVATXXXXXXXXXXX 353
S + V L P NF + WLV+F+APWC C+ L PE +K +
Sbjct: 450 SVNSHVTTLGPQNFPANEKEP---WLVDFFAPWCPPCRALLPELRKASKHLYGQLKFGTL 506
Query: 354 XXXXHQSLGGQYGVQGFPTIKIFGSNKNRPEDYQGGRTGEAIVDAALSALRQLVKDXXXX 533
H+ L Y +Q +PT +F N++ +Y+G + E I+ + V+D
Sbjct: 507 DCTIHEGLCNMYNIQAYPTTVVF--NQSNIHEYEGHHSAEQIL--------EFVEDLM-- 554
Query: 534 XXXXXXXXXXXXXEGSGKKDVIELTDDTFDKNVLD--SEDVWMVEFYAPWCGHCKNLEPE 707
VI LT TF++ V ++VWMV+FY+PWC C+ L PE
Sbjct: 555 -----------------NPSVISLTPTTFNELVKQRKHDEVWMVDFYSPWCHPCQILMPE 597
Query: 708 WAAAATEVKEQTKGKVKLAAVDATVNQVLASRYGIRGFPTIKIF-QKGESPVDY 866
W A + G + + ++D ++ +R +P I+ F QK +Y
Sbjct: 598 WKRMARTL----IGLINVGSIDCQQYHSFCAQENVRRYPEIRFFPQKSNKAYEY 647
Score = 64.3 bits (155), Expect = 4e-10
Identities = 33/106 (31%), Positives = 58/106 (54%)
Frame = +3
Query: 591 DVIELTDDTFDKNVLDSEDVWMVEFYAPWCGHCKNLEPEWAAAATEVKEQTKGKVKLAAV 770
++I L FD V +S ++W V FY+P C HC +L P W A V G +++ AV
Sbjct: 130 EIITLDRREFDAAV-NSGELWFVNFYSPGCSHCHDLAPTWRDFAKVV----DGLLRIGAV 184
Query: 771 DATVNQVLASRYGIRGFPTIKIFQKGESPVDYDGGRTRSDIVTRAL 908
+ +++L G+ +P++ IF+ G + V Y G R++ ++ A+
Sbjct: 185 NCGDDRMLCRMKGVNSYPSLFIFRSGMAAVKYHGDRSKESLMNFAM 230
Score = 59.3 bits (142), Expect = 1e-08
Identities = 34/119 (28%), Positives = 53/119 (44%)
Frame = +3
Query: 165 GLYSSSDDVIELTPSNFNREVIQSDSLWLVEFYAPWCGHCQRLTPEWKKVATXXXXXXXX 344
G+Y ++I L F+ V S LW V FY+P C HC L P W+ A
Sbjct: 123 GIYDDDPEIITLDRREFDAAV-NSGELWFVNFYSPGCSHCHDLAPTWRDFAKVVDGLLRI 181
Query: 345 XXXXXXXHQSLGGQYGVQGFPTIKIFGSNKNRPEDYQGGRTGEAIVDAALSALRQLVKD 521
+ L GV +P++ IF S + Y G R+ E++++ A+ +R V +
Sbjct: 182 GAVNCGDDRMLCRMKGVNSYPSLFIFRSGMAAVK-YHGDRSKESLMNFAMQHVRSTVTE 239
Score = 58.2 bits (139), Expect = 3e-08
Identities = 33/125 (26%), Positives = 64/125 (51%), Gaps = 12/125 (9%)
Frame = +3
Query: 582 GKK---DVIELTDDTFDKNVL---------DSEDVWMVEFYAPWCGHCKNLEPEWAAAAT 725
GKK D++ L ++ + +V + ++ W+V+F+APWC C+ L PE A+
Sbjct: 436 GKKILYDILALAKESVNSHVTTLGPQNFPANEKEPWLVDFFAPWCPPCRALLPELRKAS- 494
Query: 726 EVKEQTKGKVKLAAVDATVNQVLASRYGIRGFPTIKIFQKGESPVDYDGGRTRSDIVTRA 905
+ G++K +D T+++ L + Y I+ +PT +F + +Y+G + I+
Sbjct: 495 ---KHLYGQLKFGTLDCTIHEGLCNMYNIQAYPTTVVFNQSNIH-EYEGHHSAEQILEFV 550
Query: 906 LDLFS 920
DL +
Sbjct: 551 EDLMN 555
>ref|NP_001193661.1| thioredoxin domain-containing protein 5 [Bos taurus].
Length = 437
Score = 116 bits (290), Expect = 8e-26
Identities = 72/232 (31%), Positives = 113/232 (48%), Gaps = 4/232 (1%)
Frame = +3
Query: 195 ELTPSNFNREVIQSDSLWLVEFYAPWCGHCQRLTPEWKKVATXXXXXXXXXXXXXXX--H 368
EL+ NF V Q D ++F+APWCGHC+ L P W+++A H
Sbjct: 198 ELSAGNFELHVAQGDHF--IKFFAPWCGHCKALAPTWEQLALGLEHSETVKIGKVDCTQH 255
Query: 369 QSLGGQYGVQGFPTIKIFGSNKNRPEDYQGGRTGEAIVDAALSALRQLVKDXXXXXXXXX 548
L V+G+PT+ F K + + Y+G R +++ + S L Q
Sbjct: 256 YELCSGNQVRGYPTLLWFRDGK-KVDQYKGKRDLDSLREYVQSQL-QSAGPAAPEPTQPS 313
Query: 549 XXXXXXXXEGSGKKDVIELTDDTFDKNVLDSEDVWMVEFYAPWCGHCKNLEPEWAAAATE 728
+ + V+ LT+ FD + +E V ++FYAPWCGHCK+L P W +
Sbjct: 314 EAPALAAEPAADQGTVLALTERNFDDAI--AEGVTFIKFYAPWCGHCKDLAPTWEDLS-- 369
Query: 729 VKEQTKG--KVKLAAVDATVNQVLASRYGIRGFPTIKIFQKGESPVDYDGGR 878
K++ G +V +A VD T + L S+Y +RG+PT+ +F+ GE ++ G R
Sbjct: 370 -KKEFPGLAEVTIAEVDCTAERNLCSKYSVRGYPTLLLFRGGEKVGEHSGSR 420
Score = 97.1 bits (240), Expect = 5e-20
Identities = 63/213 (29%), Positives = 93/213 (43%), Gaps = 4/213 (1%)
Frame = +3
Query: 252 VEFYAPWCGHCQRLTPEWKKVA----TXXXXXXXXXXXXXXXHQSLGGQYGVQGFPTIKI 419
V F+APWCGHCQRL P W +A + + GV+G+PT+K
Sbjct: 87 VMFFAPWCGHCQRLQPTWNDLADKYNSLEDAKVYVAKVDCTADSEVCSAQGVRGYPTLKF 146
Query: 420 FGSNKNRPEDYQGGRTGEAIVDAALSALRQLVKDXXXXXXXXXXXXXXXXXEGSGKKDVI 599
F + + YQG R +A+ L L + K+ +
Sbjct: 147 FKPGQEAVK-YQGPRDFQALEKWMLQTLNE--------EPPTPEPAVEPPRTPELKQGLY 197
Query: 600 ELTDDTFDKNVLDSEDVWMVEFYAPWCGHCKNLEPEWAAAATEVKEQTKGKVKLAAVDAT 779
EL+ F+ +V + ++F+APWCGHCK L P W A ++ VK+ VD T
Sbjct: 198 ELSAGNFELHVAQGDH--FIKFFAPWCGHCKALAPTWEQLALGLEHSE--TVKIGKVDCT 253
Query: 780 VNQVLASRYGIRGFPTIKIFQKGESPVDYDGGR 878
+ L S +RG+PT+ F+ G+ Y G R
Sbjct: 254 QHYELCSGNQVRGYPTLLWFRDGKKVDQYKGKR 286
Score = 80.5 bits (197), Expect = 5e-15
Identities = 36/95 (37%), Positives = 51/95 (53%)
Frame = +3
Query: 657 VEFYAPWCGHCKNLEPEWAAAATEVKEQTKGKVKLAAVDATVNQVLASRYGIRGFPTIKI 836
V F+APWCGHC+ L+P W A + KV +A VD T + + S G+RG+PT+K
Sbjct: 87 VMFFAPWCGHCQRLQPTWNDLADKYNSLEDAKVYVAKVDCTADSEVCSAQGVRGYPTLKF 146
Query: 837 FQKGESPVDYDGGRTRSDIVTRALDLFSDNAPPPE 941
F+ G+ V Y G R + L ++ P PE
Sbjct: 147 FKPGQEAVKYQGPRDFQALEKWMLQTLNEEPPTPE 181
>ref|NP_776758.2| protein disulfide-isomerase A3 precursor [Bos taurus].
Length = 505
Score = 112 bits (279), Expect = 1e-24
Identities = 65/170 (38%), Positives = 90/170 (52%), Gaps = 2/170 (1%)
Frame = +3
Query: 591 DVIELTDDTFDKNVLD--SEDVWMVEFYAPWCGHCKNLEPEWAAAATEVKEQTKGKVKLA 764
DV+ELTDD F+ + D S + +VEF+APWCGHCK L PE+ AAAT +K G V LA
Sbjct: 26 DVLELTDDNFESRITDTGSSGLMLVEFFAPWCGHCKKLAPEYEAAATRLK----GIVPLA 81
Query: 765 AVDATVNQVLASRYGIRGFPTIKIFQKGESPVDYDGGRTRSDIVTRALDLFSDNAPPPEL 944
VD T N ++YG+ G+PT+KIF+ GE YDG RT IV+ P
Sbjct: 82 KVDCTANTNTCNKYGVSGYPTLKIFRDGEESGAYDGPRTADGIVSHL-----KKQAGPAS 136
Query: 945 LEIISEDVAKKSCEEHQLCVVAVLPHILDTGAAGRNSYLEVLLKLADKYK 1094
+ + SE+ +K + VV D + + +L+ L D Y+
Sbjct: 137 VPLKSEEEFEKFISDKDASVVGFFK---DLFSEAHSEFLKAASNLRDNYR 183
Score = 79.7 bits (195), Expect = 8e-15
Identities = 47/124 (37%), Positives = 70/124 (56%), Gaps = 2/124 (1%)
Frame = +3
Query: 612 DTFDKNVLDSEDVWMVEFYAPWCGHCKNLEPEWAAAATEVKEQTKGKVKLAAVDATVNQV 791
+ FD+ V + ++EFYAPWCGHCKNLEP++ ++++ + +A +DAT N V
Sbjct: 384 ENFDEIVNNENKDVLIEFYAPWCGHCKNLEPKYKELGEKLRKDP--NIVIAKMDATANDV 441
Query: 792 LASRYGIRGFPTIKI--FQKGESPVDYDGGRTRSDIVTRALDLFSDNAPPPELLEIISED 965
S Y +RGFPTI K ++P Y+GGR SD ++ L + PP +I E+
Sbjct: 442 -PSPYEVRGFPTIYFSPANKKQNPKKYEGGRELSDFISY---LKREATNPP----VIQEE 493
Query: 966 VAKK 977
KK
Sbjct: 494 KPKK 497
Score = 79.0 bits (193), Expect = 1e-14
Identities = 40/105 (38%), Positives = 58/105 (55%), Gaps = 2/105 (1%)
Frame = +3
Query: 174 SSSDDVIELTPSNFNREVIQSDS--LWLVEFYAPWCGHCQRLTPEWKKVATXXXXXXXXX 347
+++ DV+ELT NF + + S L LVEF+APWCGHC++L PE++ AT
Sbjct: 22 AAASDVLELTDDNFESRITDTGSSGLMLVEFFAPWCGHCKKLAPEYEAAATRLKGIVPLA 81
Query: 348 XXXXXXHQSLGGQYGVQGFPTIKIFGSNKNRPEDYQGGRTGEAIV 482
+ + +YGV G+PT+KIF + Y G RT + IV
Sbjct: 82 KVDCTANTNTCNKYGVSGYPTLKIFRDGEESGA-YDGPRTADGIV 125
Score = 58.9 bits (141), Expect = 1e-08
Identities = 33/99 (33%), Positives = 49/99 (49%), Gaps = 2/99 (2%)
Frame = +3
Query: 174 SSSDDVIELTPSNFNREVIQSDSLWLVEFYAPWCGHCQRLTPEWKKVA-TXXXXXXXXXX 350
S+ V + NF+ V + L+EFYAPWCGHC+ L P++K++
Sbjct: 373 SNDGPVKVVVAENFDEIVNNENKDVLIEFYAPWCGHCKNLEPKYKELGEKLRKDPNIVIA 432
Query: 351 XXXXXHQSLGGQYGVQGFPTIKIFGSNKNR-PEDYQGGR 464
+ Y V+GFPTI +NK + P+ Y+GGR
Sbjct: 433 KMDATANDVPSPYEVRGFPTIYFSPANKKQNPKKYEGGR 471
>ref|NP_001039556.1| protein disulfide-isomerase A5 precursor [Bos taurus].
Length = 521
Score = 107 bits (268), Expect = 3e-23
Identities = 72/225 (32%), Positives = 109/225 (48%), Gaps = 3/225 (1%)
Frame = +3
Query: 186 DVIEL-TPSNFNREVIQSDSLWLVEFYAPWCGHCQRLTPEWKKVATXXXXXXXXXXXXXX 362
DV+ + +F R + + + L+ FYAPWC C+R+ P ++K AT
Sbjct: 154 DVVHIDNEKDFRRLLKKEEKPILMMFYAPWCSVCKRIMPHFQKAATQLRGQFVLAGMNVY 213
Query: 363 XHQ--SLGGQYGVQGFPTIKIFGSNKNRPEDYQGGRTGEAIVDAALSALRQLVKDXXXXX 536
+ ++ +Y V+G+PTI F + + G T E IV+ +
Sbjct: 214 PSEFENIKEEYSVRGYPTICYFEKGRFLFQYDSYGSTAEDIVEWLKNP----------QP 263
Query: 537 XXXXXXXXXXXXEGSGKKDVIELTDDTFDKNVLDSEDVWMVEFYAPWCGHCKNLEPEWAA 716
EG V L+D+ FD+ V + V +V F+APWCGHCK ++PE+ +
Sbjct: 264 PQPQVPETPWADEGGS---VYHLSDEDFDQFVKEHSSV-LVMFHAPWCGHCKKMKPEFES 319
Query: 717 AATEVKEQTKGKVKLAAVDATVNQVLASRYGIRGFPTIKIFQKGE 851
AA + + LAAVDATVN+ LA R+ I FPT+K F+ GE
Sbjct: 320 AAEVLHGEGDSSGVLAAVDATVNKALAERFHIAEFPTLKYFKNGE 364
Score = 80.1 bits (196), Expect = 6e-15
Identities = 61/237 (25%), Positives = 101/237 (42%), Gaps = 6/237 (2%)
Frame = +3
Query: 189 VIELTPSNFNREVIQSDSLWLVEFYAPWCGHCQRLTPEWKKVAT----XXXXXXXXXXXX 356
V L+ +F++ V + S+ LV F+APWCGHC+++ PE++ A
Sbjct: 280 VYHLSDEDFDQFVKEHSSV-LVMFHAPWCGHCKKMKPEFESAAEVLHGEGDSSGVLAAVD 338
Query: 357 XXXHQSLGGQYGVQGFPTIKIFGSNKNRPEDYQGGRTGEAIVDAALSALRQLVKDXXXXX 536
+++L ++ + FPT+K F + GE AL + ++
Sbjct: 339 ATVNKALAERFHIAEFPTLKYF-------------KNGEKYAVPALRTKKSFIEWMRNPE 385
Query: 537 XXXXXXXXXXXXEGSGKKDVIELTDDTFDKNVLDSEDVWMVEFYAPWCGHCKNLEPEWAA 716
+ S V+ L+ D F + L + +V FYAPWC HCK P + A
Sbjct: 386 SPPPPDPAWEEQQTS----VLHLSGDNF-RETLKRKKHALVMFYAPWCPHCKKAIPHFTA 440
Query: 717 AATEVKEQTKGKVKLAAVDATV--NQVLASRYGIRGFPTIKIFQKGESPVDYDGGRT 881
AA K+ K+ AA+D N+ L + ++ +PT + G+ YD T
Sbjct: 441 AADAFKDDR--KIACAAIDCVKENNKDLCQQEAVKAYPTFHYYHYGKFVEKYDTNPT 495
Score = 65.9 bits (159), Expect = 1e-10
Identities = 42/127 (33%), Positives = 65/127 (51%), Gaps = 4/127 (3%)
Frame = +3
Query: 573 EGSGKKDVIELTDDTFDKNVLDSEDV-WMVEFYAPWCGHCKNLEPEWAAAATEVKEQTKG 749
E G KDV+ + ++ + +L E+ ++ FYAPWC CK + P + AAT Q +G
Sbjct: 148 EDPGAKDVVHIDNEKDFRRLLKKEEKPILMMFYAPWCSVCKRIMPHFQKAAT----QLRG 203
Query: 750 KVKLAAVDATVNQV--LASRYGIRGFPTIKIFQKGESPVDYDG-GRTRSDIVTRALDLFS 920
+ LA ++ ++ + Y +RG+PTI F+KG YD G T DIV +
Sbjct: 204 QFVLAGMNVYPSEFENIKEEYSVRGYPTICYFEKGRFLFQYDSYGSTAEDIVE-----WL 258
Query: 921 DNAPPPE 941
N PP+
Sbjct: 259 KNPQPPQ 265
Database: RefSeq49_BP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 17,681,374
Number of sequences in database: 33,088
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33088
Number of Hits to DB: 64,850,350
Number of extensions: 1663986
Number of successful extensions: 6493
Number of sequences better than 1.0e-05: 18
Number of HSP's gapped: 6432
Number of HSP's successfully gapped: 59
Length of query: 621
Length of database: 17,681,374
Length adjustment: 108
Effective length of query: 513
Effective length of database: 14,107,870
Effective search space: 7237337310
Effective search space used: 7237337310
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Animal-Genome cDNA 20110601C-012612
Search to RefSeqCP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-012612
(1865 letters)
Database: RefSeq49_CP.fasta
33,336 sequences; 18,874,504 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_532876.2| PREDICTED: similar to Protein disulfide-isomera... 748 0.0
Alignment gi|XP_848238.1| PREDICTED: similar to Protein disulfide-isomera... 146 8e-35
Alignment gi|XP_539831.2| PREDICTED: similar to Protein disulfide-isomera... 146 8e-35
Alignment gi|XP_535988.2| PREDICTED: similar to DnaJ (Hsp40) homolog, sub... 115 1e-25
Alignment gi|XP_862766.1| PREDICTED: similar to DnaJ (Hsp40) homolog, sub... 115 1e-25
Alignment gi|XP_862743.1| PREDICTED: similar to DnaJ (Hsp40) homolog, sub... 115 1e-25
Alignment gi|XP_862695.1| PREDICTED: similar to DnaJ (Hsp40) homolog, sub... 115 1e-25
Alignment gi|XP_850921.1| PREDICTED: similar to DnaJ (Hsp40) homolog, sub... 115 1e-25
Alignment gi|XP_535765.2| PREDICTED: similar to Protein disulfide-isomera... 110 6e-24
Alignment gi|XP_535453.2| PREDICTED: similar to protein disulfide isomera... 110 6e-24
>ref|XP_532876.2| PREDICTED: similar to Protein disulfide-isomerase A6 precursor
(Thioredoxin domain containing protein 7) [Canis
familiaris].
Length = 440
Score = 748 bits (1931), Expect = 0.0
Identities = 366/421 (86%), Positives = 382/421 (90%)
Frame = +3
Query: 111 MARLVLGLMSCTLFVAVNGLYSSSDDVIELTPSNFNREVIQSDSLWLVEFYAPWCGHCQR 290
MARLVLGL+SCT F+A NGLYSSSDDVIELTPSNFNREVIQSD+LWLVEFYAPWCGHCQR
Sbjct: 1 MARLVLGLVSCTFFLAANGLYSSSDDVIELTPSNFNREVIQSDNLWLVEFYAPWCGHCQR 60
Query: 291 LTPEWKKVATXXXXXXXXXXXXXXXHQSLGGQYGVQGFPTIKIFGSNKNRPEDYQGGRTG 470
LTPEWKKVAT HQSLGGQYGVQGFPTIKIFGSNKNRPEDYQG RTG
Sbjct: 61 LTPEWKKVATALKDVVKVGAVDADKHQSLGGQYGVQGFPTIKIFGSNKNRPEDYQGSRTG 120
Query: 471 EAIVDAALSALRQLVKDXXXXXXXXXXXXXXXXXEGSGKKDVIELTDDTFDKNVLDSEDV 650
EAIVDAAL ALRQLVKD E S KKDVIELTDD+FDKNVLDS+DV
Sbjct: 121 EAIVDAALGALRQLVKDRLGGRGGGYSSGKQGRSESSNKKDVIELTDDSFDKNVLDSDDV 180
Query: 651 WMVEFYAPWCGHCKNLEPEWAAAATEVKEQTKGKVKLAAVDATVNQVLASRYGIRGFPTI 830
WMVEFYAPWCGHCKNLEPEWAAAATEVKEQTKGKVKLAAVDATVNQ+LASRYGIRGFPTI
Sbjct: 181 WMVEFYAPWCGHCKNLEPEWAAAATEVKEQTKGKVKLAAVDATVNQLLASRYGIRGFPTI 240
Query: 831 KIFQKGESPVDYDGGRTRSDIVTRALDLFSDNAPPPELLEIISEDVAKKSCEEHQLCVVA 1010
KIFQKGESP++Y+GGRTRSDIV+RALDLFS+NAPPPELLEII+ED+AKK+CEEHQLCVVA
Sbjct: 241 KIFQKGESPMEYEGGRTRSDIVSRALDLFSENAPPPELLEIINEDIAKKTCEEHQLCVVA 300
Query: 1011 VLPHILDTGAAGRNSYLEVLLKLADKYKKKMWGWLWTEAGAQTELEHALGIGGFGYPAMA 1190
VLPHILDTGAAGRNSYLEVLLKLADKYKKKMWGWLWTEAGAQ+ELE+ALGIGGFGYPAMA
Sbjct: 301 VLPHILDTGAAGRNSYLEVLLKLADKYKKKMWGWLWTEAGAQSELENALGIGGFGYPAMA 360
Query: 1191 AINARKMKFALLKGSFSEQGINEFLRELSFGRGSTAPVGGGAFPAISTREPWDGKDGELP 1370
AINARKMKFALLKGSFSEQGINEFLRELSFGRGSTAPVGGGAFP ISTREPWDGKDGELP
Sbjct: 361 AINARKMKFALLKGSFSEQGINEFLRELSFGRGSTAPVGGGAFPTISTREPWDGKDGELP 420
Query: 1371 V 1373
V
Sbjct: 421 V 421
>ref|XP_848238.1| PREDICTED: similar to Protein disulfide-isomerase A4 precursor
(Protein ERp-72) (ERp72) isoform 3 [Canis familiaris].
Length = 643
Score = 146 bits (368), Expect = 8e-35
Identities = 93/253 (36%), Positives = 132/253 (52%), Gaps = 3/253 (1%)
Frame = +3
Query: 189 VIELTPSNFNREVIQSDSLWLVEFYAPWCGHCQRLTPEWKKVATXXXXXXXXXXXXXXXH 368
V+ L NF+ V D++ L+EFYAPWCGHC++ PE++K+A+
Sbjct: 61 VLVLNDINFDNFVADKDTV-LLEFYAPWCGHCKQFAPEYEKIASTLKENDPPIPVAKIDA 119
Query: 369 QS---LGGQYGVQGFPTIKIFGSNKNRPEDYQGGRTGEAIVDAALSALRQLVKDXXXXXX 539
S L G++GV G+PTIKI K DY+G RT E IV VK+
Sbjct: 120 TSESALAGRFGVSGYPTIKIL--KKGEAVDYEGSRTQEEIVAK--------VKEVSQPNW 169
Query: 540 XXXXXXXXXXXEGSGKKDVIELTDDTFDKNVLDSEDVWMVEFYAPWCGHCKNLEPEWAAA 719
+ LT + FD +V++ D+ +VEFYAPWCGHCK L PE+ A
Sbjct: 170 TPPPEV------------TLVLTKENFD-DVVNGADIILVEFYAPWCGHCKKLAPEYEKA 216
Query: 720 ATEVKEQTKGKVKLAAVDATVNQVLASRYGIRGFPTIKIFQKGESPVDYDGGRTRSDIVT 899
A E+ +++ + LA VDAT LA R+ + +PT+KIF+KG+ P DY+G R + IV
Sbjct: 217 AKELSKRSP-PIPLAKVDATAETDLAKRFEVSSYPTLKIFRKGK-PFDYNGPREKYGIV- 273
Query: 900 RALDLFSDNAPPP 938
D + + PP
Sbjct: 274 ---DYMIEQSGPP 283
Score = 108 bits (270), Expect = 2e-23
Identities = 54/125 (43%), Positives = 81/125 (64%), Gaps = 1/125 (0%)
Frame = +3
Query: 594 VIELTDDTFDKNVLDSEDVWMVEFYAPWCGHCKNLEPEWAAAATEVKEQTKGKVKLAAVD 773
V+ L D FD V D + V ++EFYAPWCGHCK PE+ A+ +KE + +A +D
Sbjct: 61 VLVLNDINFDNFVADKDTV-LLEFYAPWCGHCKQFAPEYEKIASTLKENDP-PIPVAKID 118
Query: 774 ATVNQVLASRYGIRGFPTIKIFQKGESPVDYDGGRTRSDIVTRALDLFSDN-APPPELLE 950
AT LA R+G+ G+PTIKI +KGE+ VDY+G RT+ +IV + ++ N PPPE+
Sbjct: 119 ATSESALAGRFGVSGYPTIKILKKGEA-VDYEGSRTQEEIVAKVKEVSQPNWTPPPEVTL 177
Query: 951 IISED 965
+++++
Sbjct: 178 VLTKE 182
Score = 82.8 bits (203), Expect = 1e-15
Identities = 40/101 (39%), Positives = 61/101 (60%), Gaps = 2/101 (1%)
Frame = +3
Query: 579 SGKKDVIELTDDTFDKNVLDSEDVWMVEFYAPWCGHCKNLEPEWAAAATEVKEQTKGKVK 758
+ K V + TFD V+D + ++EFYAPWCGHCK LEPE+AA + K + +
Sbjct: 520 NNKGPVKVVVGKTFDSVVMDPKKDVLIEFYAPWCGHCKQLEPEYAALGKKYK--NRKNLV 577
Query: 759 LAAVDATVNQVLASRYGIRGFPTIKIFQKGE--SPVDYDGG 875
+A +DAT N + + RY + GFPTI +G+ +P+ ++ G
Sbjct: 578 IAKMDATANDITSDRYRVDGFPTIYFAPRGDKKNPIKFEDG 618
>ref|XP_539831.2| PREDICTED: similar to Protein disulfide-isomerase A4 precursor
(Protein ERp-72) (ERp72) isoform 1 [Canis familiaris].
Length = 628
Score = 146 bits (368), Expect = 8e-35
Identities = 93/253 (36%), Positives = 132/253 (52%), Gaps = 3/253 (1%)
Frame = +3
Query: 189 VIELTPSNFNREVIQSDSLWLVEFYAPWCGHCQRLTPEWKKVATXXXXXXXXXXXXXXXH 368
V+ L NF+ V D++ L+EFYAPWCGHC++ PE++K+A+
Sbjct: 61 VLVLNDINFDNFVADKDTV-LLEFYAPWCGHCKQFAPEYEKIASTLKENDPPIPVAKIDA 119
Query: 369 QS---LGGQYGVQGFPTIKIFGSNKNRPEDYQGGRTGEAIVDAALSALRQLVKDXXXXXX 539
S L G++GV G+PTIKI K DY+G RT E IV VK+
Sbjct: 120 TSESALAGRFGVSGYPTIKIL--KKGEAVDYEGSRTQEEIVAK--------VKEVSQPNW 169
Query: 540 XXXXXXXXXXXEGSGKKDVIELTDDTFDKNVLDSEDVWMVEFYAPWCGHCKNLEPEWAAA 719
+ LT + FD +V++ D+ +VEFYAPWCGHCK L PE+ A
Sbjct: 170 TPPPEV------------TLVLTKENFD-DVVNGADIILVEFYAPWCGHCKKLAPEYEKA 216
Query: 720 ATEVKEQTKGKVKLAAVDATVNQVLASRYGIRGFPTIKIFQKGESPVDYDGGRTRSDIVT 899
A E+ +++ + LA VDAT LA R+ + +PT+KIF+KG+ P DY+G R + IV
Sbjct: 217 AKELSKRSP-PIPLAKVDATAETDLAKRFEVSSYPTLKIFRKGK-PFDYNGPREKYGIV- 273
Query: 900 RALDLFSDNAPPP 938
D + + PP
Sbjct: 274 ---DYMIEQSGPP 283
Score = 108 bits (270), Expect = 2e-23
Identities = 54/125 (43%), Positives = 81/125 (64%), Gaps = 1/125 (0%)
Frame = +3
Query: 594 VIELTDDTFDKNVLDSEDVWMVEFYAPWCGHCKNLEPEWAAAATEVKEQTKGKVKLAAVD 773
V+ L D FD V D + V ++EFYAPWCGHCK PE+ A+ +KE + +A +D
Sbjct: 61 VLVLNDINFDNFVADKDTV-LLEFYAPWCGHCKQFAPEYEKIASTLKENDP-PIPVAKID 118
Query: 774 ATVNQVLASRYGIRGFPTIKIFQKGESPVDYDGGRTRSDIVTRALDLFSDN-APPPELLE 950
AT LA R+G+ G+PTIKI +KGE+ VDY+G RT+ +IV + ++ N PPPE+
Sbjct: 119 ATSESALAGRFGVSGYPTIKILKKGEA-VDYEGSRTQEEIVAKVKEVSQPNWTPPPEVTL 177
Query: 951 IISED 965
+++++
Sbjct: 178 VLTKE 182
Score = 82.8 bits (203), Expect = 1e-15
Identities = 40/101 (39%), Positives = 61/101 (60%), Gaps = 2/101 (1%)
Frame = +3
Query: 579 SGKKDVIELTDDTFDKNVLDSEDVWMVEFYAPWCGHCKNLEPEWAAAATEVKEQTKGKVK 758
+ K V + TFD V+D + ++EFYAPWCGHCK LEPE+AA + K + +
Sbjct: 505 NNKGPVKVVVGKTFDSVVMDPKKDVLIEFYAPWCGHCKQLEPEYAALGKKYK--NRKNLV 562
Query: 759 LAAVDATVNQVLASRYGIRGFPTIKIFQKGE--SPVDYDGG 875
+A +DAT N + + RY + GFPTI +G+ +P+ ++ G
Sbjct: 563 IAKMDATANDITSDRYRVDGFPTIYFAPRGDKKNPIKFEDG 603
>ref|XP_535988.2| PREDICTED: similar to DnaJ (Hsp40) homolog, subfamily C, member 10
isoform 1 [Canis familiaris].
Length = 794
Score = 115 bits (288), Expect = 1e-25
Identities = 70/223 (31%), Positives = 99/223 (44%), Gaps = 6/223 (2%)
Frame = +3
Query: 189 VIELTPSNFNREVIQS--DSLWLVEFYAPWCGHCQRLTPEWKKVATXXXXXXXXXXXXXX 362
VI LTP+ FN V Q D +W+V+FY+PWC CQ L PEWK++A
Sbjct: 559 VISLTPTTFNELVKQRKHDEVWMVDFYSPWCHPCQVLMPEWKRMARTLTGLINVGSIDCQ 618
Query: 363 XHQSLGGQYGVQGFPTIKIFGSNKNRPEDYQG----GRTGEAIVDAALSALRQLVKDXXX 530
+ S Q V+ +P I+ + N+ Y R ++ L L Q
Sbjct: 619 QYHSFCAQENVRRYPEIRFYPQKSNKAYQYHSYNGWNRDAYSLRIWGLGFLPQAS----- 673
Query: 531 XXXXXXXXXXXXXXEGSGKKDVIELTDDTFDKNVLDSEDVWMVEFYAPWCGHCKNLEPEW 710
I+LT TF++ VL ++ W+V+FYAPWCG C+N PE+
Sbjct: 674 ----------------------IDLTPQTFNEKVLQGKNHWVVDFYAPWCGPCQNFAPEF 711
Query: 711 AAAATEVKEQTKGKVKLAAVDATVNQVLASRYGIRGFPTIKIF 839
A + KGKVK VD + GIR +PT+K +
Sbjct: 712 ELLARMI----KGKVKAGKVDCQAYGQTCQKAGIRAYPTVKFY 750
Score = 94.7 bits (234), Expect = 3e-19
Identities = 62/234 (26%), Positives = 97/234 (41%), Gaps = 3/234 (1%)
Frame = +3
Query: 174 SSSDDVIELTPSNFNREVIQSDSLWLVEFYAPWCGHCQRLTPEWKKVATXXXXXXXXXXX 353
S + V L P NF WLV+F+APWC C+ L PE +K +
Sbjct: 451 SVNSHVTTLGPQNFPAN---DKEPWLVDFFAPWCPPCRALLPELRKASKHLYGQLKFGTL 507
Query: 354 XXXXHQSLGGQYGVQGFPTIKIFGSNKNRPEDYQGGRTGEAIVDAALSALRQLVKDXXXX 533
H+ L Y +Q +PT +F N++ +Y+G + E I++
Sbjct: 508 DCTIHEGLCNMYNIQAYPTTVVF--NQSNVHEYEGHHSAEQILE---------------- 549
Query: 534 XXXXXXXXXXXXXEGSGKKDVIELTDDTFDKNVLD--SEDVWMVEFYAPWCGHCKNLEPE 707
E VI LT TF++ V ++VWMV+FY+PWC C+ L PE
Sbjct: 550 -----------FIEDLMNPSVISLTPTTFNELVKQRKHDEVWMVDFYSPWCHPCQVLMPE 598
Query: 708 WAAAATEVKEQTKGKVKLAAVDATVNQVLASRYGIRGFPTIKIF-QKGESPVDY 866
W A + G + + ++D ++ +R +P I+ + QK Y
Sbjct: 599 WKRMARTL----TGLINVGSIDCQQYHSFCAQENVRRYPEIRFYPQKSNKAYQY 648
Score = 68.6 bits (166), Expect = 2e-11
Identities = 35/106 (33%), Positives = 60/106 (56%)
Frame = +3
Query: 591 DVIELTDDTFDKNVLDSEDVWMVEFYAPWCGHCKNLEPEWAAAATEVKEQTKGKVKLAAV 770
++I L FD V +S ++W V FY+P C HC +L P W A EV G +++ AV
Sbjct: 131 EIITLDRREFDAAV-NSGELWFVNFYSPGCSHCHDLAPTWRDFAKEV----DGLLRIGAV 185
Query: 771 DATVNQVLASRYGIRGFPTIKIFQKGESPVDYDGGRTRSDIVTRAL 908
+ +++L G+ +P++ IF+ G + V Y G R++ +V+ A+
Sbjct: 186 NCGDDRMLCRMKGVNSYPSLFIFRSGMAAVKYHGDRSKESLVSFAM 231
Score = 60.5 bits (145), Expect = 5e-09
Identities = 35/119 (29%), Positives = 53/119 (44%)
Frame = +3
Query: 165 GLYSSSDDVIELTPSNFNREVIQSDSLWLVEFYAPWCGHCQRLTPEWKKVATXXXXXXXX 344
G+Y ++I L F+ V S LW V FY+P C HC L P W+ A
Sbjct: 124 GIYDDDPEIITLDRREFDAAV-NSGELWFVNFYSPGCSHCHDLAPTWRDFAKEVDGLLRI 182
Query: 345 XXXXXXXHQSLGGQYGVQGFPTIKIFGSNKNRPEDYQGGRTGEAIVDAALSALRQLVKD 521
+ L GV +P++ IF S + Y G R+ E++V A+ +R+ V +
Sbjct: 183 GAVNCGDDRMLCRMKGVNSYPSLFIFRSGMAAVK-YHGDRSKESLVSFAMQHVRRTVTE 240
Score = 57.0 bits (136), Expect = 6e-08
Identities = 27/95 (28%), Positives = 53/95 (55%)
Frame = +3
Query: 636 DSEDVWMVEFYAPWCGHCKNLEPEWAAAATEVKEQTKGKVKLAAVDATVNQVLASRYGIR 815
+ ++ W+V+F+APWC C+ L PE A+ + G++K +D T+++ L + Y I+
Sbjct: 467 NDKEPWLVDFFAPWCPPCRALLPELRKAS----KHLYGQLKFGTLDCTIHEGLCNMYNIQ 522
Query: 816 GFPTIKIFQKGESPVDYDGGRTRSDIVTRALDLFS 920
+PT +F + + +Y+G + I+ DL +
Sbjct: 523 AYPTTVVFNQ-SNVHEYEGHHSAEQILEFIEDLMN 556
>ref|XP_862766.1| PREDICTED: similar to DnaJ (Hsp40) homolog, subfamily C, member 10
isoform 6 [Canis familiaris].
Length = 748
Score = 115 bits (288), Expect = 1e-25
Identities = 70/223 (31%), Positives = 99/223 (44%), Gaps = 6/223 (2%)
Frame = +3
Query: 189 VIELTPSNFNREVIQS--DSLWLVEFYAPWCGHCQRLTPEWKKVATXXXXXXXXXXXXXX 362
VI LTP+ FN V Q D +W+V+FY+PWC CQ L PEWK++A
Sbjct: 513 VISLTPTTFNELVKQRKHDEVWMVDFYSPWCHPCQVLMPEWKRMARTLTGLINVGSIDCQ 572
Query: 363 XHQSLGGQYGVQGFPTIKIFGSNKNRPEDYQG----GRTGEAIVDAALSALRQLVKDXXX 530
+ S Q V+ +P I+ + N+ Y R ++ L L Q
Sbjct: 573 QYHSFCAQENVRRYPEIRFYPQKSNKAYQYHSYNGWNRDAYSLRIWGLGFLPQAS----- 627
Query: 531 XXXXXXXXXXXXXXEGSGKKDVIELTDDTFDKNVLDSEDVWMVEFYAPWCGHCKNLEPEW 710
I+LT TF++ VL ++ W+V+FYAPWCG C+N PE+
Sbjct: 628 ----------------------IDLTPQTFNEKVLQGKNHWVVDFYAPWCGPCQNFAPEF 665
Query: 711 AAAATEVKEQTKGKVKLAAVDATVNQVLASRYGIRGFPTIKIF 839
A + KGKVK VD + GIR +PT+K +
Sbjct: 666 ELLARMI----KGKVKAGKVDCQAYGQTCQKAGIRAYPTVKFY 704
Score = 94.7 bits (234), Expect = 3e-19
Identities = 62/234 (26%), Positives = 97/234 (41%), Gaps = 3/234 (1%)
Frame = +3
Query: 174 SSSDDVIELTPSNFNREVIQSDSLWLVEFYAPWCGHCQRLTPEWKKVATXXXXXXXXXXX 353
S + V L P NF WLV+F+APWC C+ L PE +K +
Sbjct: 405 SVNSHVTTLGPQNFPAN---DKEPWLVDFFAPWCPPCRALLPELRKASKHLYGQLKFGTL 461
Query: 354 XXXXHQSLGGQYGVQGFPTIKIFGSNKNRPEDYQGGRTGEAIVDAALSALRQLVKDXXXX 533
H+ L Y +Q +PT +F N++ +Y+G + E I++
Sbjct: 462 DCTIHEGLCNMYNIQAYPTTVVF--NQSNVHEYEGHHSAEQILE---------------- 503
Query: 534 XXXXXXXXXXXXXEGSGKKDVIELTDDTFDKNVLD--SEDVWMVEFYAPWCGHCKNLEPE 707
E VI LT TF++ V ++VWMV+FY+PWC C+ L PE
Sbjct: 504 -----------FIEDLMNPSVISLTPTTFNELVKQRKHDEVWMVDFYSPWCHPCQVLMPE 552
Query: 708 WAAAATEVKEQTKGKVKLAAVDATVNQVLASRYGIRGFPTIKIF-QKGESPVDY 866
W A + G + + ++D ++ +R +P I+ + QK Y
Sbjct: 553 WKRMARTL----TGLINVGSIDCQQYHSFCAQENVRRYPEIRFYPQKSNKAYQY 602
Score = 68.6 bits (166), Expect = 2e-11
Identities = 35/106 (33%), Positives = 60/106 (56%)
Frame = +3
Query: 591 DVIELTDDTFDKNVLDSEDVWMVEFYAPWCGHCKNLEPEWAAAATEVKEQTKGKVKLAAV 770
++I L FD V +S ++W V FY+P C HC +L P W A EV G +++ AV
Sbjct: 131 EIITLDRREFDAAV-NSGELWFVNFYSPGCSHCHDLAPTWRDFAKEV----DGLLRIGAV 185
Query: 771 DATVNQVLASRYGIRGFPTIKIFQKGESPVDYDGGRTRSDIVTRAL 908
+ +++L G+ +P++ IF+ G + V Y G R++ +V+ A+
Sbjct: 186 NCGDDRMLCRMKGVNSYPSLFIFRSGMAAVKYHGDRSKESLVSFAM 231
Score = 60.5 bits (145), Expect = 5e-09
Identities = 35/119 (29%), Positives = 53/119 (44%)
Frame = +3
Query: 165 GLYSSSDDVIELTPSNFNREVIQSDSLWLVEFYAPWCGHCQRLTPEWKKVATXXXXXXXX 344
G+Y ++I L F+ V S LW V FY+P C HC L P W+ A
Sbjct: 124 GIYDDDPEIITLDRREFDAAV-NSGELWFVNFYSPGCSHCHDLAPTWRDFAKEVDGLLRI 182
Query: 345 XXXXXXXHQSLGGQYGVQGFPTIKIFGSNKNRPEDYQGGRTGEAIVDAALSALRQLVKD 521
+ L GV +P++ IF S + Y G R+ E++V A+ +R+ V +
Sbjct: 183 GAVNCGDDRMLCRMKGVNSYPSLFIFRSGMAAVK-YHGDRSKESLVSFAMQHVRRTVTE 240
Score = 57.0 bits (136), Expect = 6e-08
Identities = 27/95 (28%), Positives = 53/95 (55%)
Frame = +3
Query: 636 DSEDVWMVEFYAPWCGHCKNLEPEWAAAATEVKEQTKGKVKLAAVDATVNQVLASRYGIR 815
+ ++ W+V+F+APWC C+ L PE A+ + G++K +D T+++ L + Y I+
Sbjct: 421 NDKEPWLVDFFAPWCPPCRALLPELRKAS----KHLYGQLKFGTLDCTIHEGLCNMYNIQ 476
Query: 816 GFPTIKIFQKGESPVDYDGGRTRSDIVTRALDLFS 920
+PT +F + + +Y+G + I+ DL +
Sbjct: 477 AYPTTVVFNQ-SNVHEYEGHHSAEQILEFIEDLMN 510
>ref|XP_862743.1| PREDICTED: similar to DnaJ (Hsp40) homolog, subfamily C, member 10
isoform 5 [Canis familiaris].
Length = 525
Score = 115 bits (288), Expect = 1e-25
Identities = 70/223 (31%), Positives = 99/223 (44%), Gaps = 6/223 (2%)
Frame = +3
Query: 189 VIELTPSNFNREVIQS--DSLWLVEFYAPWCGHCQRLTPEWKKVATXXXXXXXXXXXXXX 362
VI LTP+ FN V Q D +W+V+FY+PWC CQ L PEWK++A
Sbjct: 290 VISLTPTTFNELVKQRKHDEVWMVDFYSPWCHPCQVLMPEWKRMARTLTGLINVGSIDCQ 349
Query: 363 XHQSLGGQYGVQGFPTIKIFGSNKNRPEDYQG----GRTGEAIVDAALSALRQLVKDXXX 530
+ S Q V+ +P I+ + N+ Y R ++ L L Q
Sbjct: 350 QYHSFCAQENVRRYPEIRFYPQKSNKAYQYHSYNGWNRDAYSLRIWGLGFLPQAS----- 404
Query: 531 XXXXXXXXXXXXXXEGSGKKDVIELTDDTFDKNVLDSEDVWMVEFYAPWCGHCKNLEPEW 710
I+LT TF++ VL ++ W+V+FYAPWCG C+N PE+
Sbjct: 405 ----------------------IDLTPQTFNEKVLQGKNHWVVDFYAPWCGPCQNFAPEF 442
Query: 711 AAAATEVKEQTKGKVKLAAVDATVNQVLASRYGIRGFPTIKIF 839
A + KGKVK VD + GIR +PT+K +
Sbjct: 443 ELLARMI----KGKVKAGKVDCQAYGQTCQKAGIRAYPTVKFY 481
Score = 63.5 bits (153), Expect = 6e-10
Identities = 42/164 (25%), Positives = 70/164 (42%), Gaps = 3/164 (1%)
Frame = +3
Query: 384 QYGVQGFPTIKIFGSNKNRPEDYQGGRTGEAIVDAALSALRQLVKDXXXXXXXXXXXXXX 563
QY +Q +PT +F N++ +Y+G + E I++
Sbjct: 249 QYNIQAYPTTVVF--NQSNVHEYEGHHSAEQILE-------------------------- 280
Query: 564 XXXEGSGKKDVIELTDDTFDKNVLDS--EDVWMVEFYAPWCGHCKNLEPEWAAAATEVKE 737
E VI LT TF++ V ++VWMV+FY+PWC C+ L PEW A +
Sbjct: 281 -FIEDLMNPSVISLTPTTFNELVKQRKHDEVWMVDFYSPWCHPCQVLMPEWKRMARTL-- 337
Query: 738 QTKGKVKLAAVDATVNQVLASRYGIRGFPTIKIF-QKGESPVDY 866
G + + ++D ++ +R +P I+ + QK Y
Sbjct: 338 --TGLINVGSIDCQQYHSFCAQENVRRYPEIRFYPQKSNKAYQY 379
>ref|XP_862695.1| PREDICTED: similar to DnaJ (Hsp40) homolog, subfamily C, member 10
isoform 3 [Canis familiaris].
Length = 794
Score = 115 bits (288), Expect = 1e-25
Identities = 70/223 (31%), Positives = 99/223 (44%), Gaps = 6/223 (2%)
Frame = +3
Query: 189 VIELTPSNFNREVIQS--DSLWLVEFYAPWCGHCQRLTPEWKKVATXXXXXXXXXXXXXX 362
VI LTP+ FN V Q D +W+V+FY+PWC CQ L PEWK++A
Sbjct: 559 VISLTPTTFNELVKQRKHDEVWMVDFYSPWCHPCQVLMPEWKRMARTLTGLINVGSIDCQ 618
Query: 363 XHQSLGGQYGVQGFPTIKIFGSNKNRPEDYQG----GRTGEAIVDAALSALRQLVKDXXX 530
+ S Q V+ +P I+ + N+ Y R ++ L L Q
Sbjct: 619 QYHSFCAQENVRRYPEIRFYPQKSNKAYQYHSYNGWNRDAYSLRIWGLGFLPQAS----- 673
Query: 531 XXXXXXXXXXXXXXEGSGKKDVIELTDDTFDKNVLDSEDVWMVEFYAPWCGHCKNLEPEW 710
I+LT TF++ VL ++ W+V+FYAPWCG C+N PE+
Sbjct: 674 ----------------------IDLTPQTFNEKVLQGKNHWVVDFYAPWCGPCQNFAPEF 711
Query: 711 AAAATEVKEQTKGKVKLAAVDATVNQVLASRYGIRGFPTIKIF 839
A + KGKVK VD + GIR +PT+K +
Sbjct: 712 ELLARMI----KGKVKAGKVDCQAYGQTCQKAGIRAYPTVKFY 750
Score = 94.7 bits (234), Expect = 3e-19
Identities = 62/234 (26%), Positives = 97/234 (41%), Gaps = 3/234 (1%)
Frame = +3
Query: 174 SSSDDVIELTPSNFNREVIQSDSLWLVEFYAPWCGHCQRLTPEWKKVATXXXXXXXXXXX 353
S + V L P NF WLV+F+APWC C+ L PE +K +
Sbjct: 451 SVNSHVTTLGPQNFPAN---DKEPWLVDFFAPWCPPCRALLPELRKASKHLYGQLKFGTL 507
Query: 354 XXXXHQSLGGQYGVQGFPTIKIFGSNKNRPEDYQGGRTGEAIVDAALSALRQLVKDXXXX 533
H+ L Y +Q +PT +F N++ +Y+G + E I++
Sbjct: 508 DCTIHEGLCNMYNIQAYPTTVVF--NQSNVHEYEGHHSAEQILE---------------- 549
Query: 534 XXXXXXXXXXXXXEGSGKKDVIELTDDTFDKNVLD--SEDVWMVEFYAPWCGHCKNLEPE 707
E VI LT TF++ V ++VWMV+FY+PWC C+ L PE
Sbjct: 550 -----------FIEDLMNPSVISLTPTTFNELVKQRKHDEVWMVDFYSPWCHPCQVLMPE 598
Query: 708 WAAAATEVKEQTKGKVKLAAVDATVNQVLASRYGIRGFPTIKIF-QKGESPVDY 866
W A + G + + ++D ++ +R +P I+ + QK Y
Sbjct: 599 WKRMARTL----TGLINVGSIDCQQYHSFCAQENVRRYPEIRFYPQKSNKAYQY 648
Score = 68.6 bits (166), Expect = 2e-11
Identities = 35/106 (33%), Positives = 60/106 (56%)
Frame = +3
Query: 591 DVIELTDDTFDKNVLDSEDVWMVEFYAPWCGHCKNLEPEWAAAATEVKEQTKGKVKLAAV 770
++I L FD V +S ++W V FY+P C HC +L P W A EV G +++ AV
Sbjct: 131 EIITLDRREFDAAV-NSGELWFVNFYSPGCSHCHDLAPTWRDFAKEV----DGLLRIGAV 185
Query: 771 DATVNQVLASRYGIRGFPTIKIFQKGESPVDYDGGRTRSDIVTRAL 908
+ +++L G+ +P++ IF+ G + V Y G R++ +V+ A+
Sbjct: 186 NCGDDRMLCRMKGVNSYPSLFIFRSGMAAVKYHGDRSKESLVSFAM 231
Score = 60.5 bits (145), Expect = 5e-09
Identities = 35/119 (29%), Positives = 53/119 (44%)
Frame = +3
Query: 165 GLYSSSDDVIELTPSNFNREVIQSDSLWLVEFYAPWCGHCQRLTPEWKKVATXXXXXXXX 344
G+Y ++I L F+ V S LW V FY+P C HC L P W+ A
Sbjct: 124 GIYDDDPEIITLDRREFDAAV-NSGELWFVNFYSPGCSHCHDLAPTWRDFAKEVDGLLRI 182
Query: 345 XXXXXXXHQSLGGQYGVQGFPTIKIFGSNKNRPEDYQGGRTGEAIVDAALSALRQLVKD 521
+ L GV +P++ IF S + Y G R+ E++V A+ +R+ V +
Sbjct: 183 GAVNCGDDRMLCRMKGVNSYPSLFIFRSGMAAVK-YHGDRSKESLVSFAMQHVRRTVTE 240
Score = 57.0 bits (136), Expect = 6e-08
Identities = 27/95 (28%), Positives = 53/95 (55%)
Frame = +3
Query: 636 DSEDVWMVEFYAPWCGHCKNLEPEWAAAATEVKEQTKGKVKLAAVDATVNQVLASRYGIR 815
+ ++ W+V+F+APWC C+ L PE A+ + G++K +D T+++ L + Y I+
Sbjct: 467 NDKEPWLVDFFAPWCPPCRALLPELRKAS----KHLYGQLKFGTLDCTIHEGLCNMYNIQ 522
Query: 816 GFPTIKIFQKGESPVDYDGGRTRSDIVTRALDLFS 920
+PT +F + + +Y+G + I+ DL +
Sbjct: 523 AYPTTVVFNQ-SNVHEYEGHHSAEQILEFIEDLMN 556
>ref|XP_850921.1| PREDICTED: similar to DnaJ (Hsp40) homolog, subfamily C, member 10
isoform 2 [Canis familiaris].
Length = 794
Score = 115 bits (288), Expect = 1e-25
Identities = 70/223 (31%), Positives = 99/223 (44%), Gaps = 6/223 (2%)
Frame = +3
Query: 189 VIELTPSNFNREVIQS--DSLWLVEFYAPWCGHCQRLTPEWKKVATXXXXXXXXXXXXXX 362
VI LTP+ FN V Q D +W+V+FY+PWC CQ L PEWK++A
Sbjct: 559 VISLTPTTFNELVKQRKHDEVWMVDFYSPWCHPCQVLMPEWKRMARTLTGLINVGSIDCQ 618
Query: 363 XHQSLGGQYGVQGFPTIKIFGSNKNRPEDYQG----GRTGEAIVDAALSALRQLVKDXXX 530
+ S Q V+ +P I+ + N+ Y R ++ L L Q
Sbjct: 619 QYHSFCAQENVRRYPEIRFYPQKSNKAYQYHSYNGWNRDAYSLRIWGLGFLPQAS----- 673
Query: 531 XXXXXXXXXXXXXXEGSGKKDVIELTDDTFDKNVLDSEDVWMVEFYAPWCGHCKNLEPEW 710
I+LT TF++ VL ++ W+V+FYAPWCG C+N PE+
Sbjct: 674 ----------------------IDLTPQTFNEKVLQGKNHWVVDFYAPWCGPCQNFAPEF 711
Query: 711 AAAATEVKEQTKGKVKLAAVDATVNQVLASRYGIRGFPTIKIF 839
A + KGKVK VD + GIR +PT+K +
Sbjct: 712 ELLARMI----KGKVKAGKVDCQAYGQTCQKAGIRAYPTVKFY 750
Score = 94.7 bits (234), Expect = 3e-19
Identities = 62/234 (26%), Positives = 97/234 (41%), Gaps = 3/234 (1%)
Frame = +3
Query: 174 SSSDDVIELTPSNFNREVIQSDSLWLVEFYAPWCGHCQRLTPEWKKVATXXXXXXXXXXX 353
S + V L P NF WLV+F+APWC C+ L PE +K +
Sbjct: 451 SVNSHVTTLGPQNFPAN---DKEPWLVDFFAPWCPPCRALLPELRKASKHLYGQLKFGTL 507
Query: 354 XXXXHQSLGGQYGVQGFPTIKIFGSNKNRPEDYQGGRTGEAIVDAALSALRQLVKDXXXX 533
H+ L Y +Q +PT +F N++ +Y+G + E I++
Sbjct: 508 DCTIHEGLCNMYNIQAYPTTVVF--NQSNVHEYEGHHSAEQILE---------------- 549
Query: 534 XXXXXXXXXXXXXEGSGKKDVIELTDDTFDKNVLD--SEDVWMVEFYAPWCGHCKNLEPE 707
E VI LT TF++ V ++VWMV+FY+PWC C+ L PE
Sbjct: 550 -----------FIEDLMNPSVISLTPTTFNELVKQRKHDEVWMVDFYSPWCHPCQVLMPE 598
Query: 708 WAAAATEVKEQTKGKVKLAAVDATVNQVLASRYGIRGFPTIKIF-QKGESPVDY 866
W A + G + + ++D ++ +R +P I+ + QK Y
Sbjct: 599 WKRMARTL----TGLINVGSIDCQQYHSFCAQENVRRYPEIRFYPQKSNKAYQY 648
Score = 68.6 bits (166), Expect = 2e-11
Identities = 35/106 (33%), Positives = 60/106 (56%)
Frame = +3
Query: 591 DVIELTDDTFDKNVLDSEDVWMVEFYAPWCGHCKNLEPEWAAAATEVKEQTKGKVKLAAV 770
++I L FD V +S ++W V FY+P C HC +L P W A EV G +++ AV
Sbjct: 131 EIITLDRREFDAAV-NSGELWFVNFYSPGCSHCHDLAPTWRDFAKEV----DGLLRIGAV 185
Query: 771 DATVNQVLASRYGIRGFPTIKIFQKGESPVDYDGGRTRSDIVTRAL 908
+ +++L G+ +P++ IF+ G + V Y G R++ +V+ A+
Sbjct: 186 NCGDDRMLCRMKGVNSYPSLFIFRSGMAAVKYHGDRSKESLVSFAM 231
Score = 60.5 bits (145), Expect = 5e-09
Identities = 35/119 (29%), Positives = 53/119 (44%)
Frame = +3
Query: 165 GLYSSSDDVIELTPSNFNREVIQSDSLWLVEFYAPWCGHCQRLTPEWKKVATXXXXXXXX 344
G+Y ++I L F+ V S LW V FY+P C HC L P W+ A
Sbjct: 124 GIYDDDPEIITLDRREFDAAV-NSGELWFVNFYSPGCSHCHDLAPTWRDFAKEVDGLLRI 182
Query: 345 XXXXXXXHQSLGGQYGVQGFPTIKIFGSNKNRPEDYQGGRTGEAIVDAALSALRQLVKD 521
+ L GV +P++ IF S + Y G R+ E++V A+ +R+ V +
Sbjct: 183 GAVNCGDDRMLCRMKGVNSYPSLFIFRSGMAAVK-YHGDRSKESLVSFAMQHVRRTVTE 240
Score = 57.0 bits (136), Expect = 6e-08
Identities = 27/95 (28%), Positives = 53/95 (55%)
Frame = +3
Query: 636 DSEDVWMVEFYAPWCGHCKNLEPEWAAAATEVKEQTKGKVKLAAVDATVNQVLASRYGIR 815
+ ++ W+V+F+APWC C+ L PE A+ + G++K +D T+++ L + Y I+
Sbjct: 467 NDKEPWLVDFFAPWCPPCRALLPELRKAS----KHLYGQLKFGTLDCTIHEGLCNMYNIQ 522
Query: 816 GFPTIKIFQKGESPVDYDGGRTRSDIVTRALDLFS 920
+PT +F + + +Y+G + I+ DL +
Sbjct: 523 AYPTTVVFNQ-SNVHEYEGHHSAEQILEFIEDLMN 556
>ref|XP_535765.2| PREDICTED: similar to Protein disulfide-isomerase A5 precursor
(Protein disulfide isomerase-related protein) [Canis
familiaris].
Length = 658
Score = 110 bits (274), Expect = 6e-24
Identities = 79/254 (31%), Positives = 120/254 (47%), Gaps = 3/254 (1%)
Frame = +3
Query: 186 DVIEL-TPSNFNREVIQSDSLWLVEFYAPWCGHCQRLTPEWKKVATXXXXXXXXXXXXXX 362
DV+ + + +F R + + + L+ FYAPWC C+R+ P ++K AT
Sbjct: 291 DVVHIDSEKDFRRLLKKEEKPLLMMFYAPWCSMCKRIMPHFQKAATQLRGHFVLAGMNIY 350
Query: 363 XHQ--SLGGQYGVQGFPTIKIFGSNKNRPEDYQGGRTGEAIVDAALSALRQLVKDXXXXX 536
+ ++ +Y V+G+PTI F + + G T E IV+ +
Sbjct: 351 PSEFENVKEEYNVRGYPTICYFEKGRFLFQYDNYGSTAEDIVEWLKNP----------QP 400
Query: 537 XXXXXXXXXXXXEGSGKKDVIELTDDTFDKNVLDSEDVWMVEFYAPWCGHCKNLEPEWAA 716
EG V LTD+ FD+ V + V +V F+APWCGHCK ++PE+
Sbjct: 401 PQPQVPETPWADEGGS---VYHLTDEDFDQFVKEHSSV-LVMFHAPWCGHCKKMKPEFEN 456
Query: 717 AATEVKEQTKGKVKLAAVDATVNQVLASRYGIRGFPTIKIFQKGESPVDYDGGRTRSDIV 896
AA + + LAAVDATVN+ LA R+ I FPT+K F+ GE RT+ + +
Sbjct: 457 AAEVLHGEADSSGVLAAVDATVNKALAERFHISEFPTLKYFKNGEK-YAVPALRTKKNFI 515
Query: 897 TRALDLFSDNAPPP 938
+ + APPP
Sbjct: 516 EW---MRNPEAPPP 526
Score = 88.6 bits (218), Expect = 2e-17
Identities = 65/239 (27%), Positives = 103/239 (43%), Gaps = 6/239 (2%)
Frame = +3
Query: 189 VIELTPSNFNREVIQSDSLWLVEFYAPWCGHCQRLTPEWKKVAT----XXXXXXXXXXXX 356
V LT +F++ V + S+ LV F+APWCGHC+++ PE++ A
Sbjct: 417 VYHLTDEDFDQFVKEHSSV-LVMFHAPWCGHCKKMKPEFENAAEVLHGEADSSGVLAAVD 475
Query: 357 XXXHQSLGGQYGVQGFPTIKIFGSNKNRPEDYQGGRTGEAIVDAALSALRQLVKDXXXXX 536
+++L ++ + FPT+K F + GE AL + ++
Sbjct: 476 ATVNKALAERFHISEFPTLKYF-------------KNGEKYAVPALRTKKNFIEWMRNPE 522
Query: 537 XXXXXXXXXXXXEGSGKKDVIELTDDTFDKNVLDSEDVWMVEFYAPWCGHCKNLEPEWAA 716
+ S V+ L D+F + L + +V FYAPWC HCK + P + A
Sbjct: 523 APPPPEPTWEEQQTS----VLHLAGDSF-RETLKKKKHTLVMFYAPWCPHCKKVIPHFTA 577
Query: 717 AATEVKEQTKGKVKLAAVDAT--VNQVLASRYGIRGFPTIKIFQKGESPVDYDGGRTRS 887
A K+ K+ AAVD NQ L + ++ +PT + G+ YD RT S
Sbjct: 578 TADVFKDDR--KIACAAVDCVKEKNQDLCQQEAVKAYPTFHYYHYGKFAEKYDSDRTES 634
Score = 64.7 bits (156), Expect = 3e-10
Identities = 42/127 (33%), Positives = 63/127 (49%), Gaps = 4/127 (3%)
Frame = +3
Query: 573 EGSGKKDVIELTDDTFDKNVLDSEDV-WMVEFYAPWCGHCKNLEPEWAAAATEVKEQTKG 749
E G KDV+ + + + +L E+ ++ FYAPWC CK + P + AAT Q +G
Sbjct: 285 EDPGAKDVVHIDSEKDFRRLLKKEEKPLLMMFYAPWCSMCKRIMPHFQKAAT----QLRG 340
Query: 750 KVKLAAVDATVNQV--LASRYGIRGFPTIKIFQKGESPVDYDG-GRTRSDIVTRALDLFS 920
LA ++ ++ + Y +RG+PTI F+KG YD G T DIV +
Sbjct: 341 HFVLAGMNIYPSEFENVKEEYNVRGYPTICYFEKGRFLFQYDNYGSTAEDIVE-----WL 395
Query: 921 DNAPPPE 941
N PP+
Sbjct: 396 KNPQPPQ 402
>ref|XP_535453.2| PREDICTED: similar to protein disulfide isomerase-associated 3
precursor [Canis familiaris].
Length = 687
Score = 110 bits (274), Expect = 6e-24
Identities = 64/170 (37%), Positives = 90/170 (52%), Gaps = 2/170 (1%)
Frame = +3
Query: 591 DVIELTDDTFDKNVLD--SEDVWMVEFYAPWCGHCKNLEPEWAAAATEVKEQTKGKVKLA 764
DV+ELTDD F+ + D S + +VEF+APWCGHCK L PE+ AAAT +K G V LA
Sbjct: 208 DVLELTDDNFESRISDTGSAGLMLVEFFAPWCGHCKRLAPEYEAAATRLK----GIVPLA 263
Query: 765 AVDATVNQVLASRYGIRGFPTIKIFQKGESPVDYDGGRTRSDIVTRALDLFSDNAPPPEL 944
VD T N ++YG+ G+PT+KIF+ GE YDG RT IV+ P
Sbjct: 264 KVDCTANTNTCNKYGVSGYPTLKIFRDGEEAGAYDGPRTADGIVSHL-----KKQAGPAS 318
Query: 945 LEIISEDVAKKSCEEHQLCVVAVLPHILDTGAAGRNSYLEVLLKLADKYK 1094
+ + +E+ +K + VV D + + +L+ L D Y+
Sbjct: 319 VPLRTEEEFEKFISDKDASVVGFFQ---DLFSEAHSEFLKAASNLRDNYR 365
Score = 82.8 bits (203), Expect = 1e-15
Identities = 48/119 (40%), Positives = 63/119 (52%), Gaps = 2/119 (1%)
Frame = +3
Query: 132 LMSCTLFVAVNGLYSSSDDVIELTPSNFNREVIQSDS--LWLVEFYAPWCGHCQRLTPEW 305
L L A GL S+SD V+ELT NF + + S L LVEF+APWCGHC+RL PE+
Sbjct: 191 LPGVALLFAAAGLASASD-VLELTDDNFESRISDTGSAGLMLVEFFAPWCGHCKRLAPEY 249
Query: 306 KKVATXXXXXXXXXXXXXXXHQSLGGQYGVQGFPTIKIFGSNKNRPEDYQGGRTGEAIV 482
+ AT + + +YGV G+PT+KIF + Y G RT + IV
Sbjct: 250 EAAATRLKGIVPLAKVDCTANTNTCNKYGVSGYPTLKIFRDGEEAGA-YDGPRTADGIV 307
Score = 81.3 bits (199), Expect = 3e-15
Identities = 49/124 (39%), Positives = 70/124 (56%), Gaps = 2/124 (1%)
Frame = +3
Query: 612 DTFDKNVLDSEDVWMVEFYAPWCGHCKNLEPEWAAAATEVKEQTKGKVKLAAVDATVNQV 791
+ FD+ V D ++EFYAPWCGHCKNLEP++ ++++ + +A +DAT N V
Sbjct: 566 ENFDEIVNDENKDVLIEFYAPWCGHCKNLEPKYKELGEKLRKDP--NIIIAKMDATANDV 623
Query: 792 LASRYGIRGFPTIKI--FQKGESPVDYDGGRTRSDIVTRALDLFSDNAPPPELLEIISED 965
S Y +RGFPTI K +P Y+GGR SD ++ L + PP +I E+
Sbjct: 624 -PSPYEVRGFPTIYFSPANKKLNPKKYEGGRELSDFISY---LQREATNPP----VIQEE 675
Query: 966 VAKK 977
AKK
Sbjct: 676 KAKK 679
Score = 58.5 bits (140), Expect = 2e-08
Identities = 33/99 (33%), Positives = 48/99 (48%), Gaps = 2/99 (2%)
Frame = +3
Query: 174 SSSDDVIELTPSNFNREVIQSDSLWLVEFYAPWCGHCQRLTPEWKKVA-TXXXXXXXXXX 350
S+ V + NF+ V + L+EFYAPWCGHC+ L P++K++
Sbjct: 555 SNDGPVKVVVAENFDEIVNDENKDVLIEFYAPWCGHCKNLEPKYKELGEKLRKDPNIIIA 614
Query: 351 XXXXXHQSLGGQYGVQGFPTIKIFGSNKN-RPEDYQGGR 464
+ Y V+GFPTI +NK P+ Y+GGR
Sbjct: 615 KMDATANDVPSPYEVRGFPTIYFSPANKKLNPKKYEGGR 653
Database: RefSeq49_CP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,874,504
Number of sequences in database: 33,336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33336
Number of Hits to DB: 67,571,730
Number of extensions: 1670414
Number of successful extensions: 6935
Number of sequences better than 1.0e-05: 16
Number of HSP's gapped: 6882
Number of HSP's successfully gapped: 67
Length of query: 621
Length of database: 18,874,504
Length adjustment: 109
Effective length of query: 512
Effective length of database: 15,240,880
Effective search space: 7803330560
Effective search space used: 7803330560
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to RefSeqSP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-012612
(1865 letters)
Database: RefSeq49_SP.fasta
24,897 sequences; 11,343,932 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001182048.1| protein disulfide-isomerase A6 [Sus scrofa]. 783 0.0
Alignment gi|XP_003354971.1| PREDICTED: potassium voltage-gated channel s... 259 5e-69
Alignment gi|XP_003130326.1| PREDICTED: protein disulfide-isomerase A4-li... 149 4e-36
Alignment gi|XP_003133574.2| PREDICTED: dnaJ homolog subfamily C member 1... 115 6e-26
Alignment gi|NP_001182041.1| protein disulfide-isomerase A3 [Sus scrofa]. 110 3e-24
Alignment gi|XP_003121742.2| PREDICTED: protein disulfide-isomerase TMX3 ... 96 5e-20
Alignment gi|XP_003132681.2| PREDICTED: protein disulfide-isomerase A5-li... 89 6e-18
Alignment gi|XP_003356566.1| PREDICTED: thioredoxin domain-containing pro... 88 2e-17
Alignment gi|XP_003128223.2| PREDICTED: thioredoxin domain-containing pro... 83 5e-16
Alignment gi|XP_001928284.1| PREDICTED: thioredoxin-related transmembrane... 70 5e-12
>ref|NP_001182048.1| protein disulfide-isomerase A6 [Sus scrofa].
Length = 440
Score = 783 bits (2022), Expect = 0.0
Identities = 389/421 (92%), Positives = 389/421 (92%)
Frame = +3
Query: 111 MARLVLGLMSCTLFVAVNGLYSSSDDVIELTPSNFNREVIQSDSLWLVEFYAPWCGHCQR 290
MARLVLGLMSCTLFVAVNGLYSSSDDVIELTPSNFNREVIQSDSLWLVEFYAPWCGHCQR
Sbjct: 1 MARLVLGLMSCTLFVAVNGLYSSSDDVIELTPSNFNREVIQSDSLWLVEFYAPWCGHCQR 60
Query: 291 LTPEWKKVATXXXXXXXXXXXXXXXHQSLGGQYGVQGFPTIKIFGSNKNRPEDYQGGRTG 470
LTPEWKKVAT HQSLGGQYGVQGFPTIKIFGSNKNRPEDYQGGRTG
Sbjct: 61 LTPEWKKVATALKDVVKVGAVDADKHQSLGGQYGVQGFPTIKIFGSNKNRPEDYQGGRTG 120
Query: 471 EAIVDAALSALRQLVKDXXXXXXXXXXXXXXXXXEGSGKKDVIELTDDTFDKNVLDSEDV 650
EAIVDAALSALRQLVKD EGSGKKDVIELTDDTFDKNVLDSEDV
Sbjct: 121 EAIVDAALSALRQLVKDRLGGRGGGYSSGKQGRSEGSGKKDVIELTDDTFDKNVLDSEDV 180
Query: 651 WMVEFYAPWCGHCKNLEPEWAAAATEVKEQTKGKVKLAAVDATVNQVLASRYGIRGFPTI 830
WMVEFYAPWCGHCKNLEPEWAAAATEVKEQTKGKVKLAAVDATVNQVLASRYGIRGFPTI
Sbjct: 181 WMVEFYAPWCGHCKNLEPEWAAAATEVKEQTKGKVKLAAVDATVNQVLASRYGIRGFPTI 240
Query: 831 KIFQKGESPVDYDGGRTRSDIVTRALDLFSDNAPPPELLEIISEDVAKKSCEEHQLCVVA 1010
KIFQKGESPVDYDGGRTRSDIVTRALDLFSDNAPPPELLEIISEDVAKKSCEEHQLCVVA
Sbjct: 241 KIFQKGESPVDYDGGRTRSDIVTRALDLFSDNAPPPELLEIISEDVAKKSCEEHQLCVVA 300
Query: 1011 VLPHILDTGAAGRNSYLEVLLKLADKYKKKMWGWLWTEAGAQTELEHALGIGGFGYPAMA 1190
VLPHILDTGAAGRNSYLEVLLKLADKYKKKMWGWLWTEAGAQTELEHALGIGGFGYPAMA
Sbjct: 301 VLPHILDTGAAGRNSYLEVLLKLADKYKKKMWGWLWTEAGAQTELEHALGIGGFGYPAMA 360
Query: 1191 AINARKMKFALLKGSFSEQGINEFLRELSFGRGSTAPVGGGAFPAISTREPWDGKDGELP 1370
AINARKMKFALLKGSFSEQGINEFLRELSFGRGSTAPVGGGAFPAISTREPWDGKDGELP
Sbjct: 361 AINARKMKFALLKGSFSEQGINEFLRELSFGRGSTAPVGGGAFPAISTREPWDGKDGELP 420
Query: 1371 V 1373
V
Sbjct: 421 V 421
>ref|XP_003354971.1| PREDICTED: potassium voltage-gated channel subfamily F member
1-like [Sus scrofa].
Length = 651
Score = 259 bits (661), Expect = 5e-69
Identities = 125/152 (82%), Positives = 125/152 (82%)
Frame = +3
Query: 3 PPSGCLEGRXXXXXXXXXXXXEVRWWLDCTTAEVLGMARLVLGLMSCTLFVAVNGLYSSS 182
PPSGCLEGR EVRWWLDCTTAEVLGMARLVLGLMSCTLFVAVNGLYSSS
Sbjct: 115 PPSGCLEGRGRDAGRRGRGAAEVRWWLDCTTAEVLGMARLVLGLMSCTLFVAVNGLYSSS 174
Query: 183 DDVIELTPSNFNREVIQSDSLWLVEFYAPWCGHCQRLTPEWKKVATXXXXXXXXXXXXXX 362
DDVIELTPSNFNREVIQSDSLWLVEFYAPWCGHCQRLTPEWKKVAT
Sbjct: 175 DDVIELTPSNFNREVIQSDSLWLVEFYAPWCGHCQRLTPEWKKVATALKDVVKVGAVDAD 234
Query: 363 XHQSLGGQYGVQGFPTIKIFGSNKNRPEDYQG 458
HQSLGGQYGVQGFPTIKIFGSNKNRPEDYQG
Sbjct: 235 KHQSLGGQYGVQGFPTIKIFGSNKNRPEDYQG 266
Score = 108 bits (271), Expect = 8e-24
Identities = 51/99 (51%), Positives = 67/99 (67%), Gaps = 1/99 (1%)
Frame = +3
Query: 579 SGKKDVIELTDDTFDKNVLDSEDVWMVEFYAPWCGHCKNLEPEWAAAATEVKEQTKGKVK 758
S DVIELT F++ V+ S+ +W+VEFYAPWCGHC+ L PEW AT +K+ VK
Sbjct: 172 SSSDDVIELTPSNFNREVIQSDSLWLVEFYAPWCGHCQRLTPEWKKVATALKD----VVK 227
Query: 759 LAAVDATVNQVLASRYGIRGFPTIKIFQKGES-PVDYDG 872
+ AVDA +Q L +YG++GFPTIKIF ++ P DY G
Sbjct: 228 VGAVDADKHQSLGGQYGVQGFPTIKIFGSNKNRPEDYQG 266
>ref|XP_003130326.1| PREDICTED: protein disulfide-isomerase A4-like [Sus scrofa].
Length = 646
Score = 149 bits (377), Expect = 4e-36
Identities = 94/253 (37%), Positives = 136/253 (53%), Gaps = 3/253 (1%)
Frame = +3
Query: 189 VIELTPSNFNREVIQSDSLWLVEFYAPWCGHCQRLTPEWKKVATXXXXXXXXXXXXXXXH 368
V+ L SNF+ V D++ L+EFYAPWCGHC++ PE++K+AT
Sbjct: 65 VLVLKDSNFDNFVADKDTV-LLEFYAPWCGHCKQFAPEYEKIATTLKENDPPIPVAKIDA 123
Query: 369 QS---LGGQYGVQGFPTIKIFGSNKNRPEDYQGGRTGEAIVDAALSALRQLVKDXXXXXX 539
S L ++ V G+PTIKI K + DY+G RT E IV + ++++ +
Sbjct: 124 TSESELASRFDVSGYPTIKIL--KKGQAVDYEGSRTQEEIV----AKVKEISQPNWIPPP 177
Query: 540 XXXXXXXXXXXEGSGKKDVIELTDDTFDKNVLDSEDVWMVEFYAPWCGHCKNLEPEWAAA 719
+ LT D FD+ V D+ D+ +VEFYAPWCGHCK L PE+ A
Sbjct: 178 EV----------------TLVLTKDNFDEVVNDA-DIILVEFYAPWCGHCKKLAPEYERA 220
Query: 720 ATEVKEQTKGKVKLAAVDATVNQVLASRYGIRGFPTIKIFQKGESPVDYDGGRTRSDIVT 899
A E+ +++ + LA VDAT LA R+ + G+PT+KIF+KG+ P DY+G R + IV
Sbjct: 221 AKELSKRSP-PIPLAKVDATAETDLAKRFDVSGYPTLKIFRKGK-PFDYNGPREKYGIV- 277
Query: 900 RALDLFSDNAPPP 938
D + + PP
Sbjct: 278 ---DYMIEQSGPP 287
Score = 109 bits (272), Expect = 6e-24
Identities = 55/125 (44%), Positives = 81/125 (64%), Gaps = 1/125 (0%)
Frame = +3
Query: 594 VIELTDDTFDKNVLDSEDVWMVEFYAPWCGHCKNLEPEWAAAATEVKEQTKGKVKLAAVD 773
V+ L D FD V D + V ++EFYAPWCGHCK PE+ AT +KE + +A +D
Sbjct: 65 VLVLKDSNFDNFVADKDTV-LLEFYAPWCGHCKQFAPEYEKIATTLKENDP-PIPVAKID 122
Query: 774 ATVNQVLASRYGIRGFPTIKIFQKGESPVDYDGGRTRSDIVTRALDLFSDN-APPPELLE 950
AT LASR+ + G+PTIKI +KG++ VDY+G RT+ +IV + ++ N PPPE+
Sbjct: 123 ATSESELASRFDVSGYPTIKILKKGQA-VDYEGSRTQEEIVAKVKEISQPNWIPPPEVTL 181
Query: 951 IISED 965
++++D
Sbjct: 182 VLTKD 186
Score = 73.9 bits (180), Expect = 3e-13
Identities = 35/89 (39%), Positives = 52/89 (58%), Gaps = 2/89 (2%)
Frame = +3
Query: 615 TFDKNVLDSEDVWMVEFYAPWCGHCKNLEPEWAAAATEVKEQTKGKVKLAAVDATVNQVL 794
TFD V+D + ++EFYAPWCGHCK LEP + + + K + +A +DAT N +
Sbjct: 535 TFDSIVMDPKKDVLIEFYAPWCGHCKQLEPVYTSLGKKYKGHK--NLVIAKMDATSNDIT 592
Query: 795 ASRYGIRGFPTIKIFQKGE--SPVDYDGG 875
RY + GFPTI G+ +P+ ++ G
Sbjct: 593 NDRYKVEGFPTIYFAPSGDKKNPIKFEDG 621
>ref|XP_003133574.2| PREDICTED: dnaJ homolog subfamily C member 10, partial [Sus
scrofa].
Length = 653
Score = 115 bits (289), Expect = 6e-26
Identities = 71/223 (31%), Positives = 99/223 (44%), Gaps = 6/223 (2%)
Frame = +3
Query: 189 VIELTPSNFNREVIQS--DSLWLVEFYAPWCGHCQRLTPEWKKVATXXXXXXXXXXXXXX 362
V+ LTP+ F+ V Q D +W+V+FY+PWC CQ L PEWK++A
Sbjct: 418 VVSLTPTTFDELVRQRKPDEVWMVDFYSPWCHPCQVLMPEWKRMARTLTGLINVGSIDCQ 477
Query: 363 XHQSLGGQYGVQGFPTIKIFGSNKNRPEDYQG----GRTGEAIVDAALSALRQLVKDXXX 530
+ SL Q V+ +P I+ F N+ Y R ++ L L Q
Sbjct: 478 QYHSLCAQENVRRYPEIRFFPQKSNKAYQYHSYNGWNRDAYSLRIWGLGFLPQAS----- 532
Query: 531 XXXXXXXXXXXXXXEGSGKKDVIELTDDTFDKNVLDSEDVWMVEFYAPWCGHCKNLEPEW 710
I+LT TF++ VL + W+V+FYAPWCG C+N PE+
Sbjct: 533 ----------------------IDLTPQTFNEKVLQGKSHWVVDFYAPWCGPCQNFAPEF 570
Query: 711 AAAATEVKEQTKGKVKLAAVDATVNQVLASRYGIRGFPTIKIF 839
A VKE KVK VD + GIR +PT+K +
Sbjct: 571 ELLARMVKE----KVKAGKVDCQAYAQTCQKAGIRAYPTVKFY 609
Score = 99.0 bits (245), Expect = 8e-21
Identities = 65/234 (27%), Positives = 100/234 (42%), Gaps = 3/234 (1%)
Frame = +3
Query: 174 SSSDDVIELTPSNFNREVIQSDSLWLVEFYAPWCGHCQRLTPEWKKVATXXXXXXXXXXX 353
S + V L P NF WLV+F+APWC C+ L PE +K +
Sbjct: 310 SVNSHVTTLGPQNFPTS---DKEPWLVDFFAPWCPPCRALLPELRKASKHLYGQLKFGTL 366
Query: 354 XXXXHQSLGGQYGVQGFPTIKIFGSNKNRPEDYQGGRTGEAIVDAALSALRQLVKDXXXX 533
H+ L Y +Q +PT +F N++ +Y+G + E I++ V+D
Sbjct: 367 DCTVHEGLCNMYNIQAYPTTVVF--NQSNIHEYEGHHSAEQILE--------FVEDLM-- 414
Query: 534 XXXXXXXXXXXXXEGSGKKDVIELTDDTFDKNVLDS--EDVWMVEFYAPWCGHCKNLEPE 707
V+ LT TFD+ V ++VWMV+FY+PWC C+ L PE
Sbjct: 415 -----------------NPSVVSLTPTTFDELVRQRKPDEVWMVDFYSPWCHPCQVLMPE 457
Query: 708 WAAAATEVKEQTKGKVKLAAVDATVNQVLASRYGIRGFPTIKIF-QKGESPVDY 866
W A + G + + ++D L ++ +R +P I+ F QK Y
Sbjct: 458 WKRMARTL----TGLINVGSIDCQQYHSLCAQENVRRYPEIRFFPQKSNKAYQY 507
Score = 65.5 bits (158), Expect = 1e-10
Identities = 29/85 (34%), Positives = 46/85 (54%), Gaps = 3/85 (3%)
Frame = +3
Query: 192 IELTPSNFNREVIQSDSLWLVEFYAPWCGHCQRLTPEWKKVATXXXXXXXXXXXXXXXHQ 371
I+LTP FN +V+Q S W+V+FYAPWCG CQ PE++ +A +
Sbjct: 533 IDLTPQTFNEKVLQGKSHWVVDFYAPWCGPCQNFAPEFELLARMVKEKVKAGKVDCQAYA 592
Query: 372 SLGGQYGVQGFPTIKIF---GSNKN 437
+ G++ +PT+K + G+ +N
Sbjct: 593 QTCQKAGIRAYPTVKFYPYEGTRRN 617
Score = 62.4 bits (150), Expect = 8e-10
Identities = 29/92 (31%), Positives = 52/92 (56%)
Frame = +3
Query: 633 LDSEDVWMVEFYAPWCGHCKNLEPEWAAAATEVKEQTKGKVKLAAVDATVNQVLASRYGI 812
++S ++W V FY+ C HC +L P W A EV G +++ AV+ +++L G+
Sbjct: 3 VNSGELWFVNFYSSGCSHCHDLAPTWRDFAREV----DGLLRIGAVNCGDDRMLCRMKGV 58
Query: 813 RGFPTIKIFQKGESPVDYDGGRTRSDIVTRAL 908
+P++ IF+ G + V Y G R++ +V A+
Sbjct: 59 SSYPSLFIFRSGMAAVKYHGDRSKESLVNFAM 90
Score = 57.4 bits (137), Expect = 3e-08
Identities = 28/93 (30%), Positives = 51/93 (54%)
Frame = +3
Query: 642 EDVWMVEFYAPWCGHCKNLEPEWAAAATEVKEQTKGKVKLAAVDATVNQVLASRYGIRGF 821
++ W+V+F+APWC C+ L PE A+ + G++K +D TV++ L + Y I+ +
Sbjct: 328 KEPWLVDFFAPWCPPCRALLPELRKAS----KHLYGQLKFGTLDCTVHEGLCNMYNIQAY 383
Query: 822 PTIKIFQKGESPVDYDGGRTRSDIVTRALDLFS 920
PT +F + +Y+G + I+ DL +
Sbjct: 384 PTTVVFNQSNIH-EYEGHHSAEQILEFVEDLMN 415
Score = 51.2 bits (121), Expect = 2e-06
Identities = 28/98 (28%), Positives = 43/98 (43%)
Frame = +3
Query: 228 IQSDSLWLVEFYAPWCGHCQRLTPEWKKVATXXXXXXXXXXXXXXXHQSLGGQYGVQGFP 407
+ S LW V FY+ C HC L P W+ A + L GV +P
Sbjct: 3 VNSGELWFVNFYSSGCSHCHDLAPTWRDFAREVDGLLRIGAVNCGDDRMLCRMKGVSSYP 62
Query: 408 TIKIFGSNKNRPEDYQGGRTGEAIVDAALSALRQLVKD 521
++ IF S + Y G R+ E++V+ A+ +R V +
Sbjct: 63 SLFIFRSGMAAVK-YHGDRSKESLVNFAMQYVRSTVTE 99
>ref|NP_001182041.1| protein disulfide-isomerase A3 [Sus scrofa].
Length = 505
Score = 110 bits (274), Expect = 3e-24
Identities = 64/170 (37%), Positives = 90/170 (52%), Gaps = 2/170 (1%)
Frame = +3
Query: 591 DVIELTDDTFDKNVLD--SEDVWMVEFYAPWCGHCKNLEPEWAAAATEVKEQTKGKVKLA 764
DV+ELTDD F+ + D S + +VEF+APWCGHCK L PE+ AAAT +K G V LA
Sbjct: 26 DVLELTDDNFESRISDTGSAGLMLVEFFAPWCGHCKRLAPEYEAAATRLK----GIVPLA 81
Query: 765 AVDATVNQVLASRYGIRGFPTIKIFQKGESPVDYDGGRTRSDIVTRALDLFSDNAPPPEL 944
VD T N ++YG+ G+PT+KIF+ GE YDG RT IV+ P
Sbjct: 82 KVDCTANTNTCNKYGVSGYPTLKIFRDGEEAGAYDGPRTADGIVSHL-----KKQAGPAS 136
Query: 945 LEIISEDVAKKSCEEHQLCVVAVLPHILDTGAAGRNSYLEVLLKLADKYK 1094
+ + +E+ +K + VV D + + +L+ L D Y+
Sbjct: 137 VPLRTEEEFEKFISDKDASVVGFFK---DLFSEAHSEFLKAASNLRDNYR 183
Score = 79.7 bits (195), Expect = 5e-15
Identities = 41/105 (39%), Positives = 58/105 (55%), Gaps = 2/105 (1%)
Frame = +3
Query: 174 SSSDDVIELTPSNFNREVIQSDS--LWLVEFYAPWCGHCQRLTPEWKKVATXXXXXXXXX 347
+++ DV+ELT NF + + S L LVEF+APWCGHC+RL PE++ AT
Sbjct: 22 AAASDVLELTDDNFESRISDTGSAGLMLVEFFAPWCGHCKRLAPEYEAAATRLKGIVPLA 81
Query: 348 XXXXXXHQSLGGQYGVQGFPTIKIFGSNKNRPEDYQGGRTGEAIV 482
+ + +YGV G+PT+KIF + Y G RT + IV
Sbjct: 82 KVDCTANTNTCNKYGVSGYPTLKIFRDGEEAGA-YDGPRTADGIV 125
Score = 79.7 bits (195), Expect = 5e-15
Identities = 49/124 (39%), Positives = 69/124 (55%), Gaps = 2/124 (1%)
Frame = +3
Query: 612 DTFDKNVLDSEDVWMVEFYAPWCGHCKNLEPEWAAAATEVKEQTKGKVKLAAVDATVNQV 791
+ FD+ V D ++EFYAPWCGHCKNLEP++ ++++ + +A +DAT N V
Sbjct: 384 ENFDEIVNDENKDVLIEFYAPWCGHCKNLEPKYKELGEKLRKDP--NIIIAKMDATANDV 441
Query: 792 LASRYGIRGFPTIKI--FQKGESPVDYDGGRTRSDIVTRALDLFSDNAPPPELLEIISED 965
S Y +RGFPTI K +P Y+GGR SD ++ L + PP II E+
Sbjct: 442 -PSPYEVRGFPTIYFSPANKKLNPKKYEGGRELSDFISY---LQREATNPP----IIQEE 493
Query: 966 VAKK 977
KK
Sbjct: 494 KPKK 497
Score = 58.5 bits (140), Expect = 1e-08
Identities = 33/99 (33%), Positives = 48/99 (48%), Gaps = 2/99 (2%)
Frame = +3
Query: 174 SSSDDVIELTPSNFNREVIQSDSLWLVEFYAPWCGHCQRLTPEWKKVA-TXXXXXXXXXX 350
S+ V + NF+ V + L+EFYAPWCGHC+ L P++K++
Sbjct: 373 SNDGPVKVVVAENFDEIVNDENKDVLIEFYAPWCGHCKNLEPKYKELGEKLRKDPNIIIA 432
Query: 351 XXXXXHQSLGGQYGVQGFPTIKIFGSNKN-RPEDYQGGR 464
+ Y V+GFPTI +NK P+ Y+GGR
Sbjct: 433 KMDATANDVPSPYEVRGFPTIYFSPANKKLNPKKYEGGR 471
>ref|XP_003121742.2| PREDICTED: protein disulfide-isomerase TMX3 [Sus scrofa].
Length = 444
Score = 96.3 bits (238), Expect = 5e-20
Identities = 47/103 (45%), Positives = 65/103 (63%)
Frame = +3
Query: 588 KDVIELTDDTFDKNVLDSEDVWMVEFYAPWCGHCKNLEPEWAAAATEVKEQTKGKVKLAA 767
K +E D++F N D D+W+V+FYAPWCGHCK LEP W E+K VK+
Sbjct: 15 KGFVEDLDESFKDNRKD--DIWLVDFYAPWCGHCKKLEPIWNEVGLEMK-SIGSPVKVGK 71
Query: 768 VDATVNQVLASRYGIRGFPTIKIFQKGESPVDYDGGRTRSDIV 896
+DAT +AS +G+RG+PTIK+ KG+ +Y G RT+ DI+
Sbjct: 72 MDATSYSSIASEFGVRGYPTIKLL-KGDLAYNYRGPRTKDDII 113
Score = 67.0 bits (162), Expect = 3e-11
Identities = 31/90 (34%), Positives = 50/90 (55%), Gaps = 3/90 (3%)
Frame = +3
Query: 231 QSDSLWLVEFYAPWCGHCQRLTPEWKKVA---TXXXXXXXXXXXXXXXHQSLGGQYGVQG 401
+ D +WLV+FYAPWCGHC++L P W +V + S+ ++GV+G
Sbjct: 29 RKDDIWLVDFYAPWCGHCKKLEPIWNEVGLEMKSIGSPVKVGKMDATSYSSIASEFGVRG 88
Query: 402 FPTIKIFGSNKNRPEDYQGGRTGEAIVDAA 491
+PTIK+ + +Y+G RT + I++ A
Sbjct: 89 YPTIKLL--KGDLAYNYRGPRTKDDIIEFA 116
>ref|XP_003132681.2| PREDICTED: protein disulfide-isomerase A5-like isoform 2 [Sus
scrofa].
Length = 312
Score = 89.4 bits (220), Expect = 6e-18
Identities = 66/237 (27%), Positives = 102/237 (43%), Gaps = 6/237 (2%)
Frame = +3
Query: 189 VIELTPSNFNREVIQSDSLWLVEFYAPWCGHCQRLTPEWKKVAT----XXXXXXXXXXXX 356
V LT +F++ V + S+ LV F+APWCGHC+++ PE++ A
Sbjct: 71 VYHLTDEDFDQFVKEHSSV-LVMFHAPWCGHCKKMKPEFENAAEVLHGEADSSGVLAAVD 129
Query: 357 XXXHQSLGGQYGVQGFPTIKIFGSNKNRPEDYQGGRTGEAIVDAALSALRQLVKDXXXXX 536
H++L ++ + FPT+K F + GE AL + V+
Sbjct: 130 ATVHKALAERFHISEFPTLKYF-------------KNGEKYAVPALRTKKNFVEWMRNPE 176
Query: 537 XXXXXXXXXXXXEGSGKKDVIELTDDTFDKNVLDSEDVWMVEFYAPWCGHCKNLEPEWAA 716
+ S V+ L+ D F + L + +V FYAPWC HCK + P + A
Sbjct: 177 APPPPDPTWEEQQTS----VLHLSGDNF-RETLKRKKHTLVMFYAPWCPHCKKVIPHFTA 231
Query: 717 AATEVKEQTKGKVKLAAVDA--TVNQVLASRYGIRGFPTIKIFQKGESPVDYDGGRT 881
A K+ K+ AAVD NQ L + ++ +PT + G+ YD RT
Sbjct: 232 TADVFKDDR--KIACAAVDCIKEKNQDLCQQEAVKAYPTFHYYHYGKLAEKYDSDRT 286
Score = 87.0 bits (214), Expect = 3e-17
Identities = 63/190 (33%), Positives = 92/190 (48%)
Frame = +3
Query: 369 QSLGGQYGVQGFPTIKIFGSNKNRPEDYQGGRTGEAIVDAALSALRQLVKDXXXXXXXXX 548
+++ +YGV+G+PTI F + + G T E IV+ +
Sbjct: 9 ENIKEEYGVRGYPTICYFEKGRFLFQYDSYGSTAEDIVEWLKNP----------QPPQPQ 58
Query: 549 XXXXXXXXEGSGKKDVIELTDDTFDKNVLDSEDVWMVEFYAPWCGHCKNLEPEWAAAATE 728
EG V LTD+ FD+ V + V +V F+APWCGHCK ++PE+ AA
Sbjct: 59 VPETPWADEGGS---VYHLTDEDFDQFVKEHSSV-LVMFHAPWCGHCKKMKPEFENAAEV 114
Query: 729 VKEQTKGKVKLAAVDATVNQVLASRYGIRGFPTIKIFQKGESPVDYDGGRTRSDIVTRAL 908
+ + LAAVDATV++ LA R+ I FPT+K F+ GE RT+ + V
Sbjct: 115 LHGEADSSGVLAAVDATVHKALAERFHISEFPTLKYFKNGEK-YAVPALRTKKNFVEW-- 171
Query: 909 DLFSDNAPPP 938
+ + APPP
Sbjct: 172 -MRNPEAPPP 180
>ref|XP_003356566.1| PREDICTED: thioredoxin domain-containing protein 5-like [Sus
scrofa].
Length = 204
Score = 87.8 bits (216), Expect = 2e-17
Identities = 42/95 (44%), Positives = 60/95 (63%)
Frame = +3
Query: 594 VIELTDDTFDKNVLDSEDVWMVEFYAPWCGHCKNLEPEWAAAATEVKEQTKGKVKLAAVD 773
V+ LT+D FD V +E V ++FYAPWCGHCKNL P W + + G VK+A VD
Sbjct: 96 VLALTEDNFDDTV--AEGVTFIKFYAPWCGHCKNLAPIWEQLSRKEFPGLAG-VKIAEVD 152
Query: 774 ATVNQVLASRYGIRGFPTIKIFQKGESPVDYDGGR 878
T + L S+Y +RG+PT+ +F+ G+ ++ GGR
Sbjct: 153 CTAERDLCSKYSVRGYPTLLLFRGGKKVGEHSGGR 187
Score = 56.6 bits (135), Expect = 5e-08
Identities = 29/95 (30%), Positives = 50/95 (52%), Gaps = 3/95 (3%)
Frame = +3
Query: 189 VIELTPSNFNREVIQSDSLWLVEFYAPWCGHCQRLTPEWKKVAT---XXXXXXXXXXXXX 359
V+ LT NF+ V ++ + ++FYAPWCGHC+ L P W++++
Sbjct: 96 VLALTEDNFDDTV--AEGVTFIKFYAPWCGHCKNLAPIWEQLSRKEFPGLAGVKIAEVDC 153
Query: 360 XXHQSLGGQYGVQGFPTIKIFGSNKNRPEDYQGGR 464
+ L +Y V+G+PT+ +F K + ++ GGR
Sbjct: 154 TAERDLCSKYSVRGYPTLLLFRGGK-KVGEHSGGR 187
>ref|XP_003128223.2| PREDICTED: thioredoxin domain-containing protein 5-like [Sus
scrofa].
Length = 315
Score = 83.2 bits (204), Expect = 5e-16
Identities = 56/212 (26%), Positives = 91/212 (42%), Gaps = 3/212 (1%)
Frame = +3
Query: 252 VEFYAPWCGHCQRLTPEWKKVATXXXXXXXXXXXXXXX--HQSLGGQYGVQGFPTIKIFG 425
++F+APWCGHC+ L P W+++A H L V+G+PT+ F
Sbjct: 97 IKFFAPWCGHCKALAPTWEQLALGLEHSATVKIGKVDCTQHYELCSGNQVRGYPTLLWFR 156
Query: 426 SNKNRPEDYQGGRTGEAIVDAALSALRQLVK-DXXXXXXXXXXXXXXXXXEGSGKKDVIE 602
K + + Y+G R L +LR+ V+ + E
Sbjct: 157 DGK-KVDQYKGKRD--------LDSLREYVQAQLQSAGPGTPETAQPSEAPAPATEPAAE 207
Query: 603 LTDDTFDKNVLDSEDVWMVEFYAPWCGHCKNLEPEWAAAATEVKEQTKGKVKLAAVDATV 782
++ + + + CGHCKNL P W + + G VK+A VD T
Sbjct: 208 QPTPSYPRGAVQPGADEVRAHTRDECGHCKNLAPIWEQLSRKEFPGLAG-VKIAEVDCTA 266
Query: 783 NQVLASRYGIRGFPTIKIFQKGESPVDYDGGR 878
+ L S+Y +RG+PT+ +F+ G+ ++ GGR
Sbjct: 267 ERDLCSKYSVRGYPTLLLFRGGKKVGEHSGGR 298
>ref|XP_001928284.1| PREDICTED: thioredoxin-related transmembrane protein 1-like [Sus
scrofa].
Length = 278
Score = 69.7 bits (169), Expect = 5e-12
Identities = 41/104 (39%), Positives = 60/104 (57%)
Frame = +3
Query: 585 KKDVIELTDDTFDKNVLDSEDVWMVEFYAPWCGHCKNLEPEWAAAATEVKEQTKGKVKLA 764
+ DV +TD+ + K +L+ E WM+EFYAPWC C+NL+PEW + A ++ +V +A
Sbjct: 28 RSDVRIITDENW-KELLEGE--WMIEFYAPWCPACQNLQPEWESFAEWGEDL---EVNVA 81
Query: 765 AVDATVNQVLASRYGIRGFPTIKIFQKGESPVDYDGGRTRSDIV 896
VD T L+ R+ I PTI + GE Y G RT+ D +
Sbjct: 82 KVDVTEQPGLSGRFIITALPTIYHCKDGEFR-RYQGPRTKKDFI 124
Score = 52.0 bits (123), Expect = 1e-06
Identities = 31/101 (30%), Positives = 48/101 (47%), Gaps = 1/101 (0%)
Frame = +3
Query: 186 DVIELTPSNFNREVIQSDSLWLVEFYAPWCGHCQRLTPEWKKVATXXXXXXXXXXXXXXX 365
DV +T N+ +E+++ + W++EFYAPWC CQ L PEW+ A
Sbjct: 30 DVRIITDENW-KELLEGE--WMIEFYAPWCPACQNLQPEWESFAEWGEDLEVNVAKVDVT 86
Query: 366 HQ-SLGGQYGVQGFPTIKIFGSNKNRPEDYQGGRTGEAIVD 485
Q L G++ + PT I+ YQG RT + ++
Sbjct: 87 EQPGLSGRFIITALPT--IYHCKDGEFRRYQGPRTKKDFIN 125
Database: RefSeq49_SP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 11,343,932
Number of sequences in database: 24,897
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 24897
Number of Hits to DB: 42,371,681
Number of extensions: 1155690
Number of successful extensions: 4166
Number of sequences better than 1.0e-05: 13
Number of HSP's gapped: 4116
Number of HSP's successfully gapped: 36
Length of query: 621
Length of database: 11,343,932
Length adjustment: 105
Effective length of query: 516
Effective length of database: 8,729,747
Effective search space: 4504549452
Effective search space used: 4504549452
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to RefSeqMP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-012612
(1865 letters)
Database: RefSeq49_MP.fasta
30,036 sequences; 15,617,559 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_082235.1| protein disulfide-isomerase A6 [Mus musculus]. 752 0.0
Alignment gi|XP_003085845.1| PREDICTED: protein disulfide-isomerase A6-li... 749 0.0
Alignment gi|XP_001476035.1| PREDICTED: protein disulfide-isomerase A6-li... 686 0.0
Alignment gi|NP_033917.2| protein disulfide-isomerase A4 [Mus musculus]. 145 1e-34
Alignment gi|NP_663342.3| thioredoxin domain-containing protein 5 precurs... 122 7e-28
Alignment gi|NP_077143.2| dnaJ homolog subfamily C member 10 [Mus musculu... 114 2e-25
Alignment gi|NP_082571.1| protein disulfide-isomerase A5 precursor [Mus m... 114 3e-25
Alignment gi|NP_031978.2| protein disulfide-isomerase A3 precursor [Mus m... 112 1e-24
Alignment gi|NP_035162.1| protein disulfide-isomerase precursor [Mus musc... 95 2e-19
Alignment gi|NP_938037.2| protein disulfide-isomerase TMX3 precursor [Mus... 94 3e-19
>ref|NP_082235.1| protein disulfide-isomerase A6 [Mus musculus].
Length = 445
Score = 752 bits (1941), Expect = 0.0
Identities = 367/424 (86%), Positives = 384/424 (90%)
Frame = +3
Query: 102 VLGMARLVLGLMSCTLFVAVNGLYSSSDDVIELTPSNFNREVIQSDSLWLVEFYAPWCGH 281
V+GMARLVLGL+SCT F+AV+GLYSSSDDVIELTPSNFNREVIQSD LWLVEFYAPWCGH
Sbjct: 3 VIGMARLVLGLVSCTFFLAVSGLYSSSDDVIELTPSNFNREVIQSDGLWLVEFYAPWCGH 62
Query: 282 CQRLTPEWKKVATXXXXXXXXXXXXXXXHQSLGGQYGVQGFPTIKIFGSNKNRPEDYQGG 461
CQRLTPEWKK AT HQSLGGQYGVQGFPTIKIFG+NKN+PEDYQGG
Sbjct: 63 CQRLTPEWKKAATALKDVVKVGAVNADKHQSLGGQYGVQGFPTIKIFGANKNKPEDYQGG 122
Query: 462 RTGEAIVDAALSALRQLVKDXXXXXXXXXXXXXXXXXEGSGKKDVIELTDDTFDKNVLDS 641
RTGEAIVDAALSALRQLVKD + S KKDV+ELTDDTFDKNVLDS
Sbjct: 123 RTGEAIVDAALSALRQLVKDRLGGRSGGYSSGKQGRGDSSSKKDVVELTDDTFDKNVLDS 182
Query: 642 EDVWMVEFYAPWCGHCKNLEPEWAAAATEVKEQTKGKVKLAAVDATVNQVLASRYGIRGF 821
EDVWMVEFYAPWCGHCKNLEPEWAAAATEVKEQTKGKVKLAAVDAT+NQVLASRYGI+GF
Sbjct: 183 EDVWMVEFYAPWCGHCKNLEPEWAAAATEVKEQTKGKVKLAAVDATMNQVLASRYGIKGF 242
Query: 822 PTIKIFQKGESPVDYDGGRTRSDIVTRALDLFSDNAPPPELLEIISEDVAKKSCEEHQLC 1001
PTIKIFQKGESPVDYDGGRTRSDIV+RALDLFSDNAPPPELLEII+ED+AKK+CEEHQLC
Sbjct: 243 PTIKIFQKGESPVDYDGGRTRSDIVSRALDLFSDNAPPPELLEIINEDIAKKTCEEHQLC 302
Query: 1002 VVAVLPHILDTGAAGRNSYLEVLLKLADKYKKKMWGWLWTEAGAQTELEHALGIGGFGYP 1181
VVAVLPHILDTGAAGRNSYLEVLLKLADKYKKKMWGWLWTEAGAQ ELE+ALGIGGFGYP
Sbjct: 303 VVAVLPHILDTGAAGRNSYLEVLLKLADKYKKKMWGWLWTEAGAQYELENALGIGGFGYP 362
Query: 1182 AMAAINARKMKFALLKGSFSEQGINEFLRELSFGRGSTAPVGGGAFPAISTREPWDGKDG 1361
AMAAINARKMKFALLKGSFSEQGINEFLRELSFGRGSTAPVGGG+FP I+ REPWDGKDG
Sbjct: 363 AMAAINARKMKFALLKGSFSEQGINEFLRELSFGRGSTAPVGGGSFPTITPREPWDGKDG 422
Query: 1362 ELPV 1373
ELPV
Sbjct: 423 ELPV 426
>ref|XP_003085845.1| PREDICTED: protein disulfide-isomerase A6-like [Mus musculus].
Length = 432
Score = 749 bits (1934), Expect = 0.0
Identities = 367/424 (86%), Positives = 383/424 (90%)
Frame = +3
Query: 102 VLGMARLVLGLMSCTLFVAVNGLYSSSDDVIELTPSNFNREVIQSDSLWLVEFYAPWCGH 281
V+GMARLVLGL+SCT F+AV+GLYSSSDDVIELTPSNFNREVIQSD LWLVEFYAPWCGH
Sbjct: 3 VIGMARLVLGLVSCTFFLAVSGLYSSSDDVIELTPSNFNREVIQSDGLWLVEFYAPWCGH 62
Query: 282 CQRLTPEWKKVATXXXXXXXXXXXXXXXHQSLGGQYGVQGFPTIKIFGSNKNRPEDYQGG 461
CQRLTPEWKK AT HQSLGGQYGVQGFPTIKIFG+NKN+PEDYQGG
Sbjct: 63 CQRLTPEWKKAATALKDVVKVGAVNADKHQSLGGQYGVQGFPTIKIFGANKNKPEDYQGG 122
Query: 462 RTGEAIVDAALSALRQLVKDXXXXXXXXXXXXXXXXXEGSGKKDVIELTDDTFDKNVLDS 641
RTGEAIVDAALSALRQLVKD + S KKDV+ELTDDTFDKNVLDS
Sbjct: 123 RTGEAIVDAALSALRQLVKDRLGGRSGGYSSGKQGRGDSSSKKDVVELTDDTFDKNVLDS 182
Query: 642 EDVWMVEFYAPWCGHCKNLEPEWAAAATEVKEQTKGKVKLAAVDATVNQVLASRYGIRGF 821
EDVWMVEFYAPWCGHCKNLEPEWAAAATEVKEQTKGKVKLAAVDATVNQVLASRYGI+GF
Sbjct: 183 EDVWMVEFYAPWCGHCKNLEPEWAAAATEVKEQTKGKVKLAAVDATVNQVLASRYGIKGF 242
Query: 822 PTIKIFQKGESPVDYDGGRTRSDIVTRALDLFSDNAPPPELLEIISEDVAKKSCEEHQLC 1001
PTIKIFQKGESPVDYDGGRTRSDIV+RALDLFSDNAPPPELLEII+ED+AKK+CEEHQLC
Sbjct: 243 PTIKIFQKGESPVDYDGGRTRSDIVSRALDLFSDNAPPPELLEIINEDIAKKTCEEHQLC 302
Query: 1002 VVAVLPHILDTGAAGRNSYLEVLLKLADKYKKKMWGWLWTEAGAQTELEHALGIGGFGYP 1181
VVAVLPHILDTGAAGRNSYLEVLLKLADKYKKKMWGWLWTEAGAQ ELE+ALGIGGFGYP
Sbjct: 303 VVAVLPHILDTGAAGRNSYLEVLLKLADKYKKKMWGWLWTEAGAQYELENALGIGGFGYP 362
Query: 1182 AMAAINARKMKFALLKGSFSEQGINEFLRELSFGRGSTAPVGGGAFPAISTREPWDGKDG 1361
AMAAINARKMKFALLKGSFSEQGINEFLRELSFGRGSTAPVGGG+FP I+ REPWDGKDG
Sbjct: 363 AMAAINARKMKFALLKGSFSEQGINEFLRELSFGRGSTAPVGGGSFPTITPREPWDGKDG 422
Query: 1362 ELPV 1373
EL V
Sbjct: 423 ELLV 426
>ref|XP_001476035.1| PREDICTED: protein disulfide-isomerase A6-like [Mus musculus].
Length = 391
Score = 686 bits (1771), Expect = 0.0
Identities = 337/389 (86%), Positives = 351/389 (90%)
Frame = +3
Query: 102 VLGMARLVLGLMSCTLFVAVNGLYSSSDDVIELTPSNFNREVIQSDSLWLVEFYAPWCGH 281
V+GMARLVLGL+SCT F+AV+GLYSSSDDVIELTPSNFNREVIQSD LWLVEFYAPWCGH
Sbjct: 3 VIGMARLVLGLVSCTFFLAVSGLYSSSDDVIELTPSNFNREVIQSDGLWLVEFYAPWCGH 62
Query: 282 CQRLTPEWKKVATXXXXXXXXXXXXXXXHQSLGGQYGVQGFPTIKIFGSNKNRPEDYQGG 461
CQRLTPEWKK AT HQSLGGQYGVQGFPTIKIFG+NKN+PEDYQGG
Sbjct: 63 CQRLTPEWKKAATALKDVVKVGAVNADKHQSLGGQYGVQGFPTIKIFGANKNKPEDYQGG 122
Query: 462 RTGEAIVDAALSALRQLVKDXXXXXXXXXXXXXXXXXEGSGKKDVIELTDDTFDKNVLDS 641
RTGEAIVDAALSALRQLVKD + S KKDV+ELTDDTFDKNVLDS
Sbjct: 123 RTGEAIVDAALSALRQLVKDRLGGRSGGYSSGKQGRGDSSSKKDVVELTDDTFDKNVLDS 182
Query: 642 EDVWMVEFYAPWCGHCKNLEPEWAAAATEVKEQTKGKVKLAAVDATVNQVLASRYGIRGF 821
EDVWMVEFYAPWCGHCKNLEPEWAAAATEVKEQTKGKVKLAAVDATVNQVLASRYGI+GF
Sbjct: 183 EDVWMVEFYAPWCGHCKNLEPEWAAAATEVKEQTKGKVKLAAVDATVNQVLASRYGIKGF 242
Query: 822 PTIKIFQKGESPVDYDGGRTRSDIVTRALDLFSDNAPPPELLEIISEDVAKKSCEEHQLC 1001
PTIKIFQKGESPVDYDGGRTRSDIV+RALDLFSDNAPPPELLEII+ED+AKK+CEEHQLC
Sbjct: 243 PTIKIFQKGESPVDYDGGRTRSDIVSRALDLFSDNAPPPELLEIINEDIAKKTCEEHQLC 302
Query: 1002 VVAVLPHILDTGAAGRNSYLEVLLKLADKYKKKMWGWLWTEAGAQTELEHALGIGGFGYP 1181
VVAVLPHILDTGAAGRNSYLEVLLKLADKYKKKMWGWLWTEAGAQ ELE+ALGIGGFGYP
Sbjct: 303 VVAVLPHILDTGAAGRNSYLEVLLKLADKYKKKMWGWLWTEAGAQYELENALGIGGFGYP 362
Query: 1182 AMAAINARKMKFALLKGSFSEQGINEFLR 1268
AMAAINARKMKFALLKGSFSEQGINEFLR
Sbjct: 363 AMAAINARKMKFALLKGSFSEQGINEFLR 391
>ref|NP_033917.2| protein disulfide-isomerase A4 [Mus musculus].
Length = 641
Score = 145 bits (366), Expect = 1e-34
Identities = 91/250 (36%), Positives = 132/250 (52%), Gaps = 3/250 (1%)
Frame = +3
Query: 198 LTPSNFNREVIQSDSLWLVEFYAPWCGHCQRLTPEWKKVATXXXXXXXXXXXXXXXHQS- 374
L NF+ V D++ L+EFYAPWCGHC++ PE++K+A+ S
Sbjct: 63 LNDGNFDNFVADKDTV-LLEFYAPWCGHCKQFAPEYEKIASTLKDNDPPIAVAKIDATSA 121
Query: 375 --LGGQYGVQGFPTIKIFGSNKNRPEDYQGGRTGEAIVDAALSALRQLVKDXXXXXXXXX 548
L ++ V G+PTIKI K + DY G RT E IV + +R++ +
Sbjct: 122 SMLASKFDVSGYPTIKIL--KKGQAVDYDGSRTQEEIV----AKVREVSQPDWTPPPEV- 174
Query: 549 XXXXXXXXEGSGKKDVIELTDDTFDKNVLDSEDVWMVEFYAPWCGHCKNLEPEWAAAATE 728
+ LT D FD +V+++ D+ +VEFYAPWCGHCK L PE+ AA E
Sbjct: 175 ---------------TLSLTKDNFD-DVVNNADIILVEFYAPWCGHCKKLAPEYEKAAKE 218
Query: 729 VKEQTKGKVKLAAVDATVNQVLASRYGIRGFPTIKIFQKGESPVDYDGGRTRSDIVTRAL 908
+ +++ + LA VDAT LA R+ + G+PT+KIF+KG P DY+G R + IV
Sbjct: 219 LSKRSP-PIPLAKVDATEQTDLAKRFDVSGYPTLKIFRKGR-PFDYNGPREKYGIV---- 272
Query: 909 DLFSDNAPPP 938
D + + PP
Sbjct: 273 DYMIEQSGPP 282
Score = 102 bits (255), Expect = 8e-22
Identities = 52/122 (42%), Positives = 79/122 (64%), Gaps = 1/122 (0%)
Frame = +3
Query: 603 LTDDTFDKNVLDSEDVWMVEFYAPWCGHCKNLEPEWAAAATEVKEQTKGKVKLAAVDATV 782
L D FD V D + V ++EFYAPWCGHCK PE+ A+ +K+ + +A +DAT
Sbjct: 63 LNDGNFDNFVADKDTV-LLEFYAPWCGHCKQFAPEYEKIASTLKDNDP-PIAVAKIDATS 120
Query: 783 NQVLASRYGIRGFPTIKIFQKGESPVDYDGGRTRSDIVTRALDLFS-DNAPPPELLEIIS 959
+LAS++ + G+PTIKI +KG++ VDYDG RT+ +IV + ++ D PPPE+ ++
Sbjct: 121 ASMLASKFDVSGYPTIKILKKGQA-VDYDGSRTQEEIVAKVREVSQPDWTPPPEVTLSLT 179
Query: 960 ED 965
+D
Sbjct: 180 KD 181
Score = 78.6 bits (192), Expect = 2e-14
Identities = 39/113 (34%), Positives = 64/113 (56%), Gaps = 2/113 (1%)
Frame = +3
Query: 579 SGKKDVIELTDDTFDKNVLDSEDVWMVEFYAPWCGHCKNLEPEWAAAATEVKEQTKGKVK 758
+ K V + TFD V+D + ++EFYAPWCGHCK LEP + + + K Q +
Sbjct: 518 NNKGPVKVVVGKTFDAIVMDPKKDVLIEFYAPWCGHCKQLEPIYTSLGKKYKGQK--DLV 575
Query: 759 LAAVDATVNQVLASRYGIRGFPTIKIFQKGE--SPVDYDGGRTRSDIVTRALD 911
+A +DAT N + +Y + GFPTI G+ +P+ ++GG + +++ +D
Sbjct: 576 IAKMDATANDITNDQYKVEGFPTIYFAPSGDKKNPIKFEGGNRDLEHLSKFID 628
Score = 73.6 bits (179), Expect = 5e-13
Identities = 40/101 (39%), Positives = 55/101 (54%), Gaps = 3/101 (2%)
Frame = +3
Query: 192 IELTPSNFNREVIQSDSLWLVEFYAPWCGHCQRLTPEWKKVA---TXXXXXXXXXXXXXX 362
+ LT NF+ +V+ + + LVEFYAPWCGHC++L PE++K A +
Sbjct: 176 LSLTKDNFD-DVVNNADIILVEFYAPWCGHCKKLAPEYEKAAKELSKRSPPIPLAKVDAT 234
Query: 363 XHQSLGGQYGVQGFPTIKIFGSNKNRPEDYQGGRTGEAIVD 485
L ++ V G+PT+KIF K RP DY G R IVD
Sbjct: 235 EQTDLAKRFDVSGYPTLKIF--RKGRPFDYNGPREKYGIVD 273
>ref|NP_663342.3| thioredoxin domain-containing protein 5 precursor [Mus musculus].
Length = 417
Score = 122 bits (307), Expect = 7e-28
Identities = 74/233 (31%), Positives = 121/233 (51%), Gaps = 5/233 (2%)
Frame = +3
Query: 195 ELTPSNFNREVIQSDSLWLVEFYAPWCGHCQRLTPEWKKVATXXXXXXXXXXXXXXX--H 368
EL+ +NF V Q + ++F+APWCGHC+ L P W+++A H
Sbjct: 179 ELSANNFELHVSQGNHF--IKFFAPWCGHCKALAPTWEQLALGLEHSETVKIGKVDCTQH 236
Query: 369 QSLGGQYGVQGFPTIKIFGSNKNRPEDYQGGRTGEAIVDAALSALRQLVKDXXXXXXXXX 548
++ ++ V+G+PT+ F K + + Y+G R E++ D S QL
Sbjct: 237 YAVCSEHQVRGYPTLLWFRDGK-KVDQYKGKRDLESLRDYVQS---QLQGSEAAPETVEP 292
Query: 549 XXXXXXXXEGSGKKD-VIELTDDTFDKNVLDSEDVWMVEFYAPWCGHCKNLEPEWAAAAT 725
E +G K V+ LT+ +F+ + ++ + V+FYAPWCGHCKNL P W +
Sbjct: 293 SEAPVMAAEPTGDKGTVLALTEKSFEDTI--AQGITFVKFYAPWCGHCKNLAPTWEELS- 349
Query: 726 EVKEQTKG--KVKLAAVDATVNQVLASRYGIRGFPTIKIFQKGESPVDYDGGR 878
K++ G V +A VD T + + S+Y +RG+PT+ +F+ GE +++GGR
Sbjct: 350 --KKEFPGLSDVTIAEVDCTAERNVCSKYSVRGYPTLLLFRGGEKVGEHNGGR 400
Score = 100 bits (249), Expect = 4e-21
Identities = 66/237 (27%), Positives = 101/237 (42%), Gaps = 4/237 (1%)
Frame = +3
Query: 252 VEFYAPWCGHCQRLTPEWK----KVATXXXXXXXXXXXXXXXHQSLGGQYGVQGFPTIKI 419
V F+APWCGHCQRL P W K + + GV+G+PT+K
Sbjct: 68 VMFFAPWCGHCQRLQPTWNDLGDKYNSMEDAKVYVAKVDCTADSDVCSAQGVRGYPTLKF 127
Query: 420 FGSNKNRPEDYQGGRTGEAIVDAALSALRQLVKDXXXXXXXXXXXXXXXXXEGSGKKDVI 599
F + + YQG R E + + L L + K+ +
Sbjct: 128 FKPGQEAVK-YQGPRDFETLENWMLQTLNE--------EPATPEPEAEPPRAPELKQGLY 178
Query: 600 ELTDDTFDKNVLDSEDVWMVEFYAPWCGHCKNLEPEWAAAATEVKEQTKGKVKLAAVDAT 779
EL+ + F+ +V S+ ++F+APWCGHCK L P W A ++ VK+ VD T
Sbjct: 179 ELSANNFELHV--SQGNHFIKFFAPWCGHCKALAPTWEQLALGLEHSE--TVKIGKVDCT 234
Query: 780 VNQVLASRYGIRGFPTIKIFQKGESPVDYDGGRTRSDIVTRALDLFSDNAPPPELLE 950
+ + S + +RG+PT+ F+ G+ Y G R + + PE +E
Sbjct: 235 QHYAVCSEHQVRGYPTLLWFRDGKKVDQYKGKRDLESLRDYVQSQLQGSEAAPETVE 291
>ref|NP_077143.2| dnaJ homolog subfamily C member 10 [Mus musculus].
Length = 793
Score = 114 bits (286), Expect = 2e-25
Identities = 68/224 (30%), Positives = 100/224 (44%), Gaps = 6/224 (2%)
Frame = +3
Query: 189 VIELTPSNFNREVIQS--DSLWLVEFYAPWCGHCQRLTPEWKKVATXXXXXXXXXXXXXX 362
V+ LTPS FN V Q D +W+V+FY+PWC CQ L PEWK++A
Sbjct: 558 VVSLTPSTFNELVKQRKHDEVWMVDFYSPWCHPCQVLMPEWKRMARTLTGLINVGSVDCQ 617
Query: 363 XHQSLGGQYGVQGFPTIKIFGSNKNRPEDYQG----GRTGEAIVDAALSALRQLVKDXXX 530
+ S Q VQ +P I+ + ++ Y R ++ L L Q
Sbjct: 618 QYHSFCTQENVQRYPEIRFYPQKSSKAYQYHSYNGWNRDAYSLRSWGLGFLPQAS----- 672
Query: 531 XXXXXXXXXXXXXXEGSGKKDVIELTDDTFDKNVLDSEDVWMVEFYAPWCGHCKNLEPEW 710
I+LT TF++ VL + W+V+FYAPWCG C+N PE+
Sbjct: 673 ----------------------IDLTPQTFNEKVLQGKTHWVVDFYAPWCGPCQNFAPEF 710
Query: 711 AAAATEVKEQTKGKVKLAAVDATVNQVLASRYGIRGFPTIKIFQ 842
A + KGKV+ VD + GI+ +P++K++Q
Sbjct: 711 ELLARMI----KGKVRAGKVDCQAYPQTCQKAGIKAYPSVKLYQ 750
Score = 95.5 bits (236), Expect = 1e-19
Identities = 62/234 (26%), Positives = 98/234 (41%), Gaps = 3/234 (1%)
Frame = +3
Query: 174 SSSDDVIELTPSNFNREVIQSDSLWLVEFYAPWCGHCQRLTPEWKKVATXXXXXXXXXXX 353
S + V L P NF WLV+F+APWC C+ L PE +K +T
Sbjct: 450 SVNSHVTTLGPQNFPAS---DKEPWLVDFFAPWCPPCRALLPELRKASTLLYGQLKVGTL 506
Query: 354 XXXXHQSLGGQYGVQGFPTIKIFGSNKNRPEDYQGGRTGEAIVDAALSALRQLVKDXXXX 533
H+ L Y +Q +PT +F N++ +Y+G + E I++
Sbjct: 507 DCTIHEGLCNMYNIQAYPTTVVF--NQSSIHEYEGHHSAEQILE---------------- 548
Query: 534 XXXXXXXXXXXXXEGSGKKDVIELTDDTFDKNVLD--SEDVWMVEFYAPWCGHCKNLEPE 707
E V+ LT TF++ V ++VWMV+FY+PWC C+ L PE
Sbjct: 549 -----------FIEDLRNPSVVSLTPSTFNELVKQRKHDEVWMVDFYSPWCHPCQVLMPE 597
Query: 708 WAAAATEVKEQTKGKVKLAAVDATVNQVLASRYGIRGFPTIKIF-QKGESPVDY 866
W A + G + + +VD ++ ++ +P I+ + QK Y
Sbjct: 598 WKRMARTL----TGLINVGSVDCQQYHSFCTQENVQRYPEIRFYPQKSSKAYQY 647
Score = 69.3 bits (168), Expect = 1e-11
Identities = 35/106 (33%), Positives = 60/106 (56%)
Frame = +3
Query: 591 DVIELTDDTFDKNVLDSEDVWMVEFYAPWCGHCKNLEPEWAAAATEVKEQTKGKVKLAAV 770
++I L FD V +S ++W V FY+P C HC +L P W A EV G +++ AV
Sbjct: 130 EIITLERREFDAAV-NSGELWFVNFYSPGCSHCHDLAPTWREFAKEV----DGLLRIGAV 184
Query: 771 DATVNQVLASRYGIRGFPTIKIFQKGESPVDYDGGRTRSDIVTRAL 908
+ +++L G+ +P++ IF+ G + V Y+G R++ +V A+
Sbjct: 185 NCGDDRMLCRMKGVNSYPSLFIFRSGMAAVKYNGDRSKESLVAFAM 230
Score = 64.3 bits (155), Expect = 3e-10
Identities = 31/115 (26%), Positives = 57/115 (49%), Gaps = 6/115 (5%)
Frame = +3
Query: 192 IELTPSNFNREVIQSDSLWLVEFYAPWCGHCQRLTPEWKKVATXXXXXXXXXXXXXXXHQ 371
I+LTP FN +V+Q + W+V+FYAPWCG CQ PE++ +A +
Sbjct: 673 IDLTPQTFNEKVLQGKTHWVVDFYAPWCGPCQNFAPEFELLARMIKGKVRAGKVDCQAYP 732
Query: 372 SLGGQYGVQGFPTIKIFGSNKNRPEDYQ------GGRTGEAIVDAALSALRQLVK 518
+ G++ +P++K++ + + ++ +T A++ L L+ VK
Sbjct: 733 QTCQKAGIKAYPSVKLYQYERAKKSIWEEQINSRDAKTIAALIYGKLETLQSQVK 787
Score = 60.1 bits (144), Expect = 6e-09
Identities = 35/119 (29%), Positives = 53/119 (44%)
Frame = +3
Query: 165 GLYSSSDDVIELTPSNFNREVIQSDSLWLVEFYAPWCGHCQRLTPEWKKVATXXXXXXXX 344
G+Y ++I L F+ V S LW V FY+P C HC L P W++ A
Sbjct: 123 GIYDDDPEIITLERREFDAAV-NSGELWFVNFYSPGCSHCHDLAPTWREFAKEVDGLLRI 181
Query: 345 XXXXXXXHQSLGGQYGVQGFPTIKIFGSNKNRPEDYQGGRTGEAIVDAALSALRQLVKD 521
+ L GV +P++ IF S + Y G R+ E++V A+ +R V +
Sbjct: 182 GAVNCGDDRMLCRMKGVNSYPSLFIFRSGMAAVK-YNGDRSKESLVAFAMQHVRSTVTE 239
Score = 58.5 bits (140), Expect = 2e-08
Identities = 29/91 (31%), Positives = 53/91 (58%)
Frame = +3
Query: 642 EDVWMVEFYAPWCGHCKNLEPEWAAAATEVKEQTKGKVKLAAVDATVNQVLASRYGIRGF 821
++ W+V+F+APWC C+ L PE A+T + G++K+ +D T+++ L + Y I+ +
Sbjct: 468 KEPWLVDFFAPWCPPCRALLPELRKASTLL----YGQLKVGTLDCTIHEGLCNMYNIQAY 523
Query: 822 PTIKIFQKGESPVDYDGGRTRSDIVTRALDL 914
PT +F + S +Y+G + I+ DL
Sbjct: 524 PTTVVFNQ-SSIHEYEGHHSAEQILEFIEDL 553
>ref|NP_082571.1| protein disulfide-isomerase A5 precursor [Mus musculus].
Length = 517
Score = 114 bits (284), Expect = 3e-25
Identities = 80/254 (31%), Positives = 120/254 (47%), Gaps = 3/254 (1%)
Frame = +3
Query: 186 DVIEL-TPSNFNREVIQSDSLWLVEFYAPWCGHCQRLTPEWKKVATXXXXXXXXXXXXXX 362
DV+ + + +F R + + + L+ FYAPWC C+R+ P ++K AT
Sbjct: 150 DVVHIDSEKDFRRLLKREEKPLLMMFYAPWCSMCKRIMPHFQKAATQVRGHIVLAGMNVY 209
Query: 363 XHQ--SLGGQYGVQGFPTIKIFGSNKNRPEDYQGGRTGEAIVDAALSALRQLVKDXXXXX 536
+ ++ +Y V+G+PTI F + G T E IV+ + L
Sbjct: 210 PSEFENIKEEYNVRGYPTICYFEKGRFLFPYENYGSTAEDIVEWLKNPL----------P 259
Query: 537 XXXXXXXXXXXXEGSGKKDVIELTDDTFDKNVLDSEDVWMVEFYAPWCGHCKNLEPEWAA 716
EG V LTD+ FD+ V + V +V F+APWCGHCK ++PE+ +
Sbjct: 260 PQPQVPETPWADEGGS---VYHLTDEDFDQFVKEHSSV-LVMFHAPWCGHCKKMKPEFES 315
Query: 717 AATEVKEQTKGKVKLAAVDATVNQVLASRYGIRGFPTIKIFQKGESPVDYDGGRTRSDIV 896
AA + + LAAVDATVN+ LA R+ I FPT+K F+ GE RT+ +
Sbjct: 316 AAEVLHGDAESSGVLAAVDATVNEALAGRFHISAFPTLKYFKNGEQQA-VPALRTKKKFI 374
Query: 897 TRALDLFSDNAPPP 938
+ + APPP
Sbjct: 375 EW---MQNPEAPPP 385
Score = 90.9 bits (224), Expect = 3e-18
Identities = 66/237 (27%), Positives = 104/237 (43%), Gaps = 6/237 (2%)
Frame = +3
Query: 189 VIELTPSNFNREVIQSDSLWLVEFYAPWCGHCQRLTPEWKKVATXXXXXXXXXXXXXXX- 365
V LT +F++ V + S+ LV F+APWCGHC+++ PE++ A
Sbjct: 276 VYHLTDEDFDQFVKEHSSV-LVMFHAPWCGHCKKMKPEFESAAEVLHGDAESSGVLAAVD 334
Query: 366 ---HQSLGGQYGVQGFPTIKIFGSNKNRPEDYQGGRTGEAIVDAALSALRQLVKDXXXXX 536
+++L G++ + FPT+K F + + + A+ ALR K
Sbjct: 335 ATVNEALAGRFHISAFPTLKYFKNGEQQ----------------AVPALRTKKKFIEWMQ 378
Query: 537 XXXXXXXXXXXXEGSGKKDVIELTDDTFDKNVLDSEDVWMVEFYAPWCGHCKNLEPEWAA 716
E + V+ L D F ++ L + +V FYAPWC HCK + P + A
Sbjct: 379 NPEAPPPPEPTWEEQ-QTSVLHLVGDNF-RDTLKKKKHTLVMFYAPWCPHCKKVIPHFTA 436
Query: 717 AATEVKEQTKGKVKLAAVDAT--VNQVLASRYGIRGFPTIKIFQKGESPVDYDGGRT 881
A KE K+ AAVD NQ L + ++ +PT + G+ Y+ RT
Sbjct: 437 TADAFKEDR--KIACAAVDCVKDKNQDLCQQEAVKAYPTFHYYHYGKLVEKYESDRT 491
Score = 65.1 bits (157), Expect = 2e-10
Identities = 38/112 (33%), Positives = 60/112 (53%), Gaps = 4/112 (3%)
Frame = +3
Query: 573 EGSGKKDVIELTDDTFDKNVLDSEDV-WMVEFYAPWCGHCKNLEPEWAAAATEVKEQTKG 749
E G KDV+ + + + +L E+ ++ FYAPWC CK + P + AAT+V +G
Sbjct: 144 EDPGAKDVVHIDSEKDFRRLLKREEKPLLMMFYAPWCSMCKRIMPHFQKAATQV----RG 199
Query: 750 KVKLAAVDATVNQV--LASRYGIRGFPTIKIFQKGESPVDYDG-GRTRSDIV 896
+ LA ++ ++ + Y +RG+PTI F+KG Y+ G T DIV
Sbjct: 200 HIVLAGMNVYPSEFENIKEEYNVRGYPTICYFEKGRFLFPYENYGSTAEDIV 251
>ref|NP_031978.2| protein disulfide-isomerase A3 precursor [Mus musculus].
Length = 505
Score = 112 bits (279), Expect = 1e-24
Identities = 66/170 (38%), Positives = 91/170 (53%), Gaps = 2/170 (1%)
Frame = +3
Query: 591 DVIELTDDTFDKNVLD--SEDVWMVEFYAPWCGHCKNLEPEWAAAATEVKEQTKGKVKLA 764
DV+ELTD+ F+ V D S + +VEF+APWCGHCK L PE+ AAAT +K G V LA
Sbjct: 26 DVLELTDENFESRVSDTGSAGLMLVEFFAPWCGHCKRLAPEYEAAATRLK----GIVPLA 81
Query: 765 AVDATVNQVLASRYGIRGFPTIKIFQKGESPVDYDGGRTRSDIVTRALDLFSDNAPPPEL 944
VD T N ++YG+ G+PT+KIF+ GE YDG RT IV+ P
Sbjct: 82 KVDCTANTNTCNKYGVSGYPTLKIFRDGEEAGAYDGPRTADGIVSHL-----KKQAGPAS 136
Query: 945 LEIISEDVAKKSCEEHQLCVVAVLPHILDTGAAGRNSYLEVLLKLADKYK 1094
+ + +E+ KK + VV D + G + +L+ L D Y+
Sbjct: 137 VPLRTEEEFKKFISDKDASVVG---FFRDLFSDGHSEFLKAASNLRDNYR 183
Score = 81.3 bits (199), Expect = 2e-15
Identities = 44/121 (36%), Positives = 63/121 (52%), Gaps = 2/121 (1%)
Frame = +3
Query: 126 LGLMSCTLFVAVNGLYSSSDDVIELTPSNFNREVIQSDS--LWLVEFYAPWCGHCQRLTP 299
L L+ + + +++ DV+ELT NF V + S L LVEF+APWCGHC+RL P
Sbjct: 6 LALLPGVALLLASARLAAASDVLELTDENFESRVSDTGSAGLMLVEFFAPWCGHCKRLAP 65
Query: 300 EWKKVATXXXXXXXXXXXXXXXHQSLGGQYGVQGFPTIKIFGSNKNRPEDYQGGRTGEAI 479
E++ AT + + +YGV G+PT+KIF + Y G RT + I
Sbjct: 66 EYEAAATRLKGIVPLAKVDCTANTNTCNKYGVSGYPTLKIFRDGEEAGA-YDGPRTADGI 124
Query: 480 V 482
V
Sbjct: 125 V 125
Score = 75.9 bits (185), Expect = 1e-13
Identities = 52/137 (37%), Positives = 75/137 (54%), Gaps = 2/137 (1%)
Frame = +3
Query: 573 EGSGKKDVIELTDDTFDKNVLDSEDVWMVEFYAPWCGHCKNLEPEWAAAATEVKEQTKGK 752
EG K V E DD ++ + +DV ++EFYAPWCGHCKNLEP++ ++ +
Sbjct: 375 EGPVKVVVAENFDDIVNE---EDKDV-LIEFYAPWCGHCKNLEPKYKELGEKLSKDP--N 428
Query: 753 VKLAAVDATVNQVLASRYGIRGFPTIKI--FQKGESPVDYDGGRTRSDIVTRALDLFSDN 926
+ +A +DAT N V S Y ++GFPTI K +P Y+GGR +D ++ L +
Sbjct: 429 IVIAKMDATANDV-PSPYEVKGFPTIYFSPANKKLTPKKYEGGRELNDFISY---LQREA 484
Query: 927 APPPELLEIISEDVAKK 977
PP II E+ KK
Sbjct: 485 TNPP----IIQEEKPKK 497
Score = 60.1 bits (144), Expect = 6e-09
Identities = 34/99 (34%), Positives = 49/99 (49%), Gaps = 2/99 (2%)
Frame = +3
Query: 174 SSSDDVIELTPSNFNREVIQSDSLWLVEFYAPWCGHCQRLTPEWKKVA-TXXXXXXXXXX 350
S+ V + NF+ V + D L+EFYAPWCGHC+ L P++K++
Sbjct: 373 SNEGPVKVVVAENFDDIVNEEDKDVLIEFYAPWCGHCKNLEPKYKELGEKLSKDPNIVIA 432
Query: 351 XXXXXHQSLGGQYGVQGFPTIKIFGSNKN-RPEDYQGGR 464
+ Y V+GFPTI +NK P+ Y+GGR
Sbjct: 433 KMDATANDVPSPYEVKGFPTIYFSPANKKLTPKKYEGGR 471
>ref|NP_035162.1| protein disulfide-isomerase precursor [Mus musculus].
Length = 509
Score = 95.1 bits (235), Expect = 2e-19
Identities = 49/104 (47%), Positives = 68/104 (65%), Gaps = 2/104 (1%)
Frame = +3
Query: 591 DVIELTDDTFDKNVLDSEDVWMVEFYAPWCGHCKNLEPEWAAAATEVKEQTKGKVKLAAV 770
+V+ L F++ L + +VEFYAPWCGHCK L PE+A AA ++K + +++LA V
Sbjct: 27 NVLVLKKSNFEE-ALAAHKYLLVEFYAPWCGHCKALAPEYAKAAAKLKAE-GSEIRLAKV 84
Query: 771 DATVNQVLASRYGIRGFPTIKIFQKGE--SPVDYDGGRTRSDIV 896
DAT LA +YG+RG+PTIK F+ G+ SP +Y GR DIV
Sbjct: 85 DATEESDLAQQYGVRGYPTIKFFKNGDTASPKEYTAGREADDIV 128
Score = 73.2 bits (178), Expect = 7e-13
Identities = 41/105 (39%), Positives = 54/105 (51%), Gaps = 4/105 (3%)
Frame = +3
Query: 183 DDVIELTPSNFNREVIQSDSLWLVEFYAPWCGHCQRLTPEWKKVAT---XXXXXXXXXXX 353
D+V+ L SNF E + + LVEFYAPWCGHC+ L PE+ K A
Sbjct: 26 DNVLVLKKSNFE-EALAAHKYLLVEFYAPWCGHCKALAPEYAKAAAKLKAEGSEIRLAKV 84
Query: 354 XXXXHQSLGGQYGVQGFPTIKIF-GSNKNRPEDYQGGRTGEAIVD 485
L QYGV+G+PTIK F + P++Y GR + IV+
Sbjct: 85 DATEESDLAQQYGVRGYPTIKFFKNGDTASPKEYTAGREADDIVN 129
Score = 67.4 bits (163), Expect = 4e-11
Identities = 37/101 (36%), Positives = 53/101 (52%), Gaps = 2/101 (1%)
Frame = +3
Query: 585 KKDVIELTDDTFDKNVLDSEDVWMVEFYAPWCGHCKNLEPEWAAAATEVKEQTKGKVKLA 764
K+ V L F++ D + VEFYAPWCGHCK L P W K+ + +A
Sbjct: 368 KQPVKVLVGANFEEVAFDEKKNVFVEFYAPWCGHCKQLAPIWDKLGETYKDHE--NIIIA 425
Query: 765 AVDATVNQVLASRYGIRGFPTIKIF--QKGESPVDYDGGRT 881
+D+T N+V A + + FPT+K F + +DY+G RT
Sbjct: 426 KMDSTANEVEAVK--VHSFPTLKFFPASADRTVIDYNGERT 464
Score = 54.7 bits (130), Expect = 2e-07
Identities = 30/91 (32%), Positives = 39/91 (42%), Gaps = 1/91 (1%)
Frame = +3
Query: 198 LTPSNFNREVIQSDSLWLVEFYAPWCGHCQRLTPEWKKVATXXXXXXXXXXXXXXXHQSL 377
L +NF VEFYAPWCGHC++L P W K+ +
Sbjct: 374 LVGANFEEVAFDEKKNVFVEFYAPWCGHCKQLAPIWDKLGETYKDHENIIIAKMDSTANE 433
Query: 378 GGQYGVQGFPTIKIFGSNKNRPE-DYQGGRT 467
V FPT+K F ++ +R DY G RT
Sbjct: 434 VEAVKVHSFPTLKFFPASADRTVIDYNGERT 464
>ref|NP_938037.2| protein disulfide-isomerase TMX3 precursor [Mus musculus].
Length = 456
Score = 94.4 bits (233), Expect = 3e-19
Identities = 46/103 (44%), Positives = 65/103 (63%)
Frame = +3
Query: 588 KDVIELTDDTFDKNVLDSEDVWMVEFYAPWCGHCKNLEPEWAAAATEVKEQTKGKVKLAA 767
K +E +++F N D D+W+V+FYAPWCGHCK LEP W E+K VK+
Sbjct: 28 KGFVEDLNESFKDNRKD--DIWLVDFYAPWCGHCKKLEPIWNEVGLEMK-SIGSPVKVGK 84
Query: 768 VDATVNQVLASRYGIRGFPTIKIFQKGESPVDYDGGRTRSDIV 896
+DAT +AS +G+RG+PTIK+ KG+ +Y G RT+ DI+
Sbjct: 85 MDATSYSSIASEFGVRGYPTIKLL-KGDLAYNYRGPRTKDDII 126
Score = 67.0 bits (162), Expect = 5e-11
Identities = 31/90 (34%), Positives = 50/90 (55%), Gaps = 3/90 (3%)
Frame = +3
Query: 231 QSDSLWLVEFYAPWCGHCQRLTPEWKKVA---TXXXXXXXXXXXXXXXHQSLGGQYGVQG 401
+ D +WLV+FYAPWCGHC++L P W +V + S+ ++GV+G
Sbjct: 42 RKDDIWLVDFYAPWCGHCKKLEPIWNEVGLEMKSIGSPVKVGKMDATSYSSIASEFGVRG 101
Query: 402 FPTIKIFGSNKNRPEDYQGGRTGEAIVDAA 491
+PTIK+ + +Y+G RT + I++ A
Sbjct: 102 YPTIKLL--KGDLAYNYRGPRTKDDIIEFA 129
Database: RefSeq49_MP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 15,617,559
Number of sequences in database: 30,036
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 30036
Number of Hits to DB: 55,782,216
Number of extensions: 1357441
Number of successful extensions: 5316
Number of sequences better than 1.0e-05: 17
Number of HSP's gapped: 5243
Number of HSP's successfully gapped: 45
Length of query: 621
Length of database: 15,617,559
Length adjustment: 107
Effective length of query: 514
Effective length of database: 12,403,707
Effective search space: 6375505398
Effective search space used: 6375505398
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to RefSeqHP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-012612
(1865 letters)
Database: RefSeq49_HP.fasta
32,964 sequences; 18,297,164 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_005733.1| protein disulfide-isomerase A6 precursor [Homo ... 746 0.0
Alignment gi|NP_004902.1| protein disulfide-isomerase A4 precursor [Homo ... 145 1e-34
Alignment gi|NP_001139021.1| thioredoxin domain-containing protein 5 isof... 125 2e-28
Alignment gi|NP_110437.2| thioredoxin domain-containing protein 5 isoform... 125 2e-28
Alignment gi|NP_061854.1| dnaJ homolog subfamily C member 10 precursor [H... 115 1e-25
Alignment gi|NP_006801.1| protein disulfide-isomerase A5 precursor [Homo ... 113 5e-25
Alignment gi|NP_005304.3| protein disulfide-isomerase A3 precursor [Homo ... 112 2e-24
Alignment gi|NP_061895.3| protein disulfide-isomerase TMX3 precursor [Hom... 97 5e-20
Alignment gi|NP_000909.2| protein disulfide-isomerase precursor [Homo sap... 93 7e-19
Alignment gi|NP_006840.2| protein disulfide-isomerase A2 precursor [Homo ... 69 2e-11
>ref|NP_005733.1| protein disulfide-isomerase A6 precursor [Homo sapiens].
Length = 440
Score = 746 bits (1925), Expect = 0.0
Identities = 367/421 (87%), Positives = 379/421 (90%)
Frame = +3
Query: 111 MARLVLGLMSCTLFVAVNGLYSSSDDVIELTPSNFNREVIQSDSLWLVEFYAPWCGHCQR 290
MA LVLGL+SCT F+AVNGLYSSSDDVIELTPSNFNREVIQSDSLWLVEFYAPWCGHCQR
Sbjct: 1 MALLVLGLVSCTFFLAVNGLYSSSDDVIELTPSNFNREVIQSDSLWLVEFYAPWCGHCQR 60
Query: 291 LTPEWKKVATXXXXXXXXXXXXXXXHQSLGGQYGVQGFPTIKIFGSNKNRPEDYQGGRTG 470
LTPEWKK AT H SLGGQYGVQGFPTIKIFGSNKNRPEDYQGGRTG
Sbjct: 61 LTPEWKKAATALKDVVKVGAVDADKHHSLGGQYGVQGFPTIKIFGSNKNRPEDYQGGRTG 120
Query: 471 EAIVDAALSALRQLVKDXXXXXXXXXXXXXXXXXEGSGKKDVIELTDDTFDKNVLDSEDV 650
EAIVDAALSALRQLVKD + S KKDVIELTDD+FDKNVLDSEDV
Sbjct: 121 EAIVDAALSALRQLVKDRLGGRSGGYSSGKQGRSDSSSKKDVIELTDDSFDKNVLDSEDV 180
Query: 651 WMVEFYAPWCGHCKNLEPEWAAAATEVKEQTKGKVKLAAVDATVNQVLASRYGIRGFPTI 830
WMVEFYAPWCGHCKNLEPEWAAAA+EVKEQTKGKVKLAAVDATVNQVLASRYGIRGFPTI
Sbjct: 181 WMVEFYAPWCGHCKNLEPEWAAAASEVKEQTKGKVKLAAVDATVNQVLASRYGIRGFPTI 240
Query: 831 KIFQKGESPVDYDGGRTRSDIVTRALDLFSDNAPPPELLEIISEDVAKKSCEEHQLCVVA 1010
KIFQKGESPVDYDGGRTRSDIV+RALDLFSDNAPPPELLEII+ED+AK++CEEHQLCVVA
Sbjct: 241 KIFQKGESPVDYDGGRTRSDIVSRALDLFSDNAPPPELLEIINEDIAKRTCEEHQLCVVA 300
Query: 1011 VLPHILDTGAAGRNSYLEVLLKLADKYKKKMWGWLWTEAGAQTELEHALGIGGFGYPAMA 1190
VLPHILDTGAAGRNSYLEVLLKLADKYKKKMWGWLWTEAGAQ+ELE ALGIGGFGYPAMA
Sbjct: 301 VLPHILDTGAAGRNSYLEVLLKLADKYKKKMWGWLWTEAGAQSELETALGIGGFGYPAMA 360
Query: 1191 AINARKMKFALLKGSFSEQGINEFLRELSFGRGSTAPVGGGAFPAISTREPWDGKDGELP 1370
AINARKMKFALLKGSFSEQGINEFLRELSFGRGSTAPVGGGAFP I REPWDG+DGELP
Sbjct: 361 AINARKMKFALLKGSFSEQGINEFLRELSFGRGSTAPVGGGAFPTIVEREPWDGRDGELP 420
Query: 1371 V 1373
V
Sbjct: 421 V 421
>ref|NP_004902.1| protein disulfide-isomerase A4 precursor [Homo sapiens].
Length = 645
Score = 145 bits (367), Expect = 1e-34
Identities = 92/253 (36%), Positives = 134/253 (52%), Gaps = 3/253 (1%)
Frame = +3
Query: 189 VIELTPSNFNREVIQSDSLWLVEFYAPWCGHCQRLTPEWKKVATXXXXXXXXXXXXXXXH 368
V+ L +NF+ V D++ L+EFYAPWCGHC++ PE++K+A
Sbjct: 64 VLVLNDANFDNFVADKDTV-LLEFYAPWCGHCKQFAPEYEKIANILKDKDPPIPVAKIDA 122
Query: 369 QS---LGGQYGVQGFPTIKIFGSNKNRPEDYQGGRTGEAIVDAALSALRQLVKDXXXXXX 539
S L ++ V G+PTIKI K + DY+G RT E IV + +R++ +
Sbjct: 123 TSASVLASRFDVSGYPTIKIL--KKGQAVDYEGSRTQEEIV----AKVREVSQPDWTPPP 176
Query: 540 XXXXXXXXXXXEGSGKKDVIELTDDTFDKNVLDSEDVWMVEFYAPWCGHCKNLEPEWAAA 719
+ LT + FD+ V D+ D+ +VEFYAPWCGHCK L PE+ A
Sbjct: 177 EV----------------TLVLTKENFDEVVNDA-DIILVEFYAPWCGHCKKLAPEYEKA 219
Query: 720 ATEVKEQTKGKVKLAAVDATVNQVLASRYGIRGFPTIKIFQKGESPVDYDGGRTRSDIVT 899
A E+ +++ + LA VDAT LA R+ + G+PT+KIF+KG P DY+G R + IV
Sbjct: 220 AKELSKRSP-PIPLAKVDATAETDLAKRFDVSGYPTLKIFRKGR-PYDYNGPREKYGIV- 276
Query: 900 RALDLFSDNAPPP 938
D + + PP
Sbjct: 277 ---DYMIEQSGPP 286
Score = 104 bits (259), Expect = 3e-22
Identities = 53/125 (42%), Positives = 82/125 (65%), Gaps = 1/125 (0%)
Frame = +3
Query: 594 VIELTDDTFDKNVLDSEDVWMVEFYAPWCGHCKNLEPEWAAAATEVKEQTKGKVKLAAVD 773
V+ L D FD V D + V ++EFYAPWCGHCK PE+ A +K++ + +A +D
Sbjct: 64 VLVLNDANFDNFVADKDTV-LLEFYAPWCGHCKQFAPEYEKIANILKDKDP-PIPVAKID 121
Query: 774 ATVNQVLASRYGIRGFPTIKIFQKGESPVDYDGGRTRSDIVTRALDLFS-DNAPPPELLE 950
AT VLASR+ + G+PTIKI +KG++ VDY+G RT+ +IV + ++ D PPPE+
Sbjct: 122 ATSASVLASRFDVSGYPTIKILKKGQA-VDYEGSRTQEEIVAKVREVSQPDWTPPPEVTL 180
Query: 951 IISED 965
+++++
Sbjct: 181 VLTKE 185
Score = 83.2 bits (204), Expect = 8e-16
Identities = 45/101 (44%), Positives = 62/101 (61%), Gaps = 2/101 (1%)
Frame = +3
Query: 579 SGKKDVIELTDDTFDKNVLDSEDVWMVEFYAPWCGHCKNLEPEWAAAATEVKEQTKGKVK 758
+ K V + TFD V+D + ++EFYAPWCGHCK LEP + + A + K Q KG V
Sbjct: 522 NNKGPVKVVVGKTFDSIVMDPKKDVLIEFYAPWCGHCKQLEPVYNSLAKKYKGQ-KGLV- 579
Query: 759 LAAVDATVNQVLASRYGIRGFPTIKIFQKGE--SPVDYDGG 875
+A +DAT N V + RY + GFPTI G+ +PV ++GG
Sbjct: 580 IAKMDATANDVPSDRYKVEGFPTIYFAPSGDKKNPVKFEGG 620
>ref|NP_001139021.1| thioredoxin domain-containing protein 5 isoform 3 [Homo sapiens].
Length = 324
Score = 125 bits (313), Expect = 2e-28
Identities = 73/230 (31%), Positives = 114/230 (49%), Gaps = 2/230 (0%)
Frame = +3
Query: 195 ELTPSNFNREVIQSDSLWLVEFYAPWCGHCQRLTPEWKKVATXXXXXXXXXXXXXXX--H 368
EL+ SNF V Q D ++F+APWCGHC+ L P W+++A H
Sbjct: 85 ELSASNFELHVAQGDHF--IKFFAPWCGHCKALAPTWEQLALGLEHSETVKIGKVDCTQH 142
Query: 369 QSLGGQYGVQGFPTIKIFGSNKNRPEDYQGGRTGEAIVDAALSALRQLVKDXXXXXXXXX 548
L V+G+PT+ F K + + Y+G R E++ + S L++
Sbjct: 143 YELCSGNQVRGYPTLLWFRDGK-KVDQYKGKRDLESLREYVESQLQRTETGATETVTPSE 201
Query: 549 XXXXXXXXEGSGKKDVIELTDDTFDKNVLDSEDVWMVEFYAPWCGHCKNLEPEWAAAATE 728
E K V+ LT++ FD + +E + ++FYAPWCGHCK L P W + +
Sbjct: 202 APVLAAEPEAD-KGTVLALTENNFDDTI--AEGITFIKFYAPWCGHCKTLAPTWEELSKK 258
Query: 729 VKEQTKGKVKLAAVDATVNQVLASRYGIRGFPTIKIFQKGESPVDYDGGR 878
G VK+A VD T + + S+Y +RG+PT+ +F+ G+ ++ GGR
Sbjct: 259 EFPGLAG-VKIAEVDCTAERNICSKYSVRGYPTLLLFRGGKKVSEHSGGR 307
Score = 73.9 bits (180), Expect = 5e-13
Identities = 48/171 (28%), Positives = 77/171 (45%)
Frame = +3
Query: 366 HQSLGGQYGVQGFPTIKIFGSNKNRPEDYQGGRTGEAIVDAALSALRQLVKDXXXXXXXX 545
H + GV+G+PT+K+F + + YQG R + + + L L +
Sbjct: 16 HSDVCSAQGVRGYPTLKLFKPGQEAVK-YQGPRDFQTLENWMLQTLNE--------EPVT 66
Query: 546 XXXXXXXXXEGSGKKDVIELTDDTFDKNVLDSEDVWMVEFYAPWCGHCKNLEPEWAAAAT 725
K+ + EL+ F+ +V + ++F+APWCGHCK L P W A
Sbjct: 67 PEPEVEPPSAPELKQGLYELSASNFELHVAQGDH--FIKFFAPWCGHCKALAPTWEQLAL 124
Query: 726 EVKEQTKGKVKLAAVDATVNQVLASRYGIRGFPTIKIFQKGESPVDYDGGR 878
++ VK+ VD T + L S +RG+PT+ F+ G+ Y G R
Sbjct: 125 GLEHSE--TVKIGKVDCTQHYELCSGNQVRGYPTLLWFRDGKKVDQYKGKR 173
>ref|NP_110437.2| thioredoxin domain-containing protein 5 isoform 1 precursor [Homo
sapiens].
Length = 432
Score = 125 bits (313), Expect = 2e-28
Identities = 73/230 (31%), Positives = 114/230 (49%), Gaps = 2/230 (0%)
Frame = +3
Query: 195 ELTPSNFNREVIQSDSLWLVEFYAPWCGHCQRLTPEWKKVATXXXXXXXXXXXXXXX--H 368
EL+ SNF V Q D ++F+APWCGHC+ L P W+++A H
Sbjct: 193 ELSASNFELHVAQGDHF--IKFFAPWCGHCKALAPTWEQLALGLEHSETVKIGKVDCTQH 250
Query: 369 QSLGGQYGVQGFPTIKIFGSNKNRPEDYQGGRTGEAIVDAALSALRQLVKDXXXXXXXXX 548
L V+G+PT+ F K + + Y+G R E++ + S L++
Sbjct: 251 YELCSGNQVRGYPTLLWFRDGK-KVDQYKGKRDLESLREYVESQLQRTETGATETVTPSE 309
Query: 549 XXXXXXXXEGSGKKDVIELTDDTFDKNVLDSEDVWMVEFYAPWCGHCKNLEPEWAAAATE 728
E K V+ LT++ FD + +E + ++FYAPWCGHCK L P W + +
Sbjct: 310 APVLAAEPEAD-KGTVLALTENNFDDTI--AEGITFIKFYAPWCGHCKTLAPTWEELSKK 366
Query: 729 VKEQTKGKVKLAAVDATVNQVLASRYGIRGFPTIKIFQKGESPVDYDGGR 878
G VK+A VD T + + S+Y +RG+PT+ +F+ G+ ++ GGR
Sbjct: 367 EFPGLAG-VKIAEVDCTAERNICSKYSVRGYPTLLLFRGGKKVSEHSGGR 415
Score = 100 bits (248), Expect = 6e-21
Identities = 63/213 (29%), Positives = 94/213 (44%), Gaps = 4/213 (1%)
Frame = +3
Query: 252 VEFYAPWCGHCQRLTPEWK----KVATXXXXXXXXXXXXXXXHQSLGGQYGVQGFPTIKI 419
V F+APWCGHCQRL P W K + H + GV+G+PT+K+
Sbjct: 82 VMFFAPWCGHCQRLQPTWNDLGDKYNSMEDAKVYVAKVDCTAHSDVCSAQGVRGYPTLKL 141
Query: 420 FGSNKNRPEDYQGGRTGEAIVDAALSALRQLVKDXXXXXXXXXXXXXXXXXEGSGKKDVI 599
F + + YQG R + + + L L + K+ +
Sbjct: 142 FKPGQEAVK-YQGPRDFQTLENWMLQTLNE--------EPVTPEPEVEPPSAPELKQGLY 192
Query: 600 ELTDDTFDKNVLDSEDVWMVEFYAPWCGHCKNLEPEWAAAATEVKEQTKGKVKLAAVDAT 779
EL+ F+ +V + ++F+APWCGHCK L P W A ++ VK+ VD T
Sbjct: 193 ELSASNFELHVAQGDH--FIKFFAPWCGHCKALAPTWEQLALGLEHSE--TVKIGKVDCT 248
Query: 780 VNQVLASRYGIRGFPTIKIFQKGESPVDYDGGR 878
+ L S +RG+PT+ F+ G+ Y G R
Sbjct: 249 QHYELCSGNQVRGYPTLLWFRDGKKVDQYKGKR 281
Score = 77.4 bits (189), Expect = 4e-14
Identities = 34/95 (35%), Positives = 50/95 (52%)
Frame = +3
Query: 657 VEFYAPWCGHCKNLEPEWAAAATEVKEQTKGKVKLAAVDATVNQVLASRYGIRGFPTIKI 836
V F+APWCGHC+ L+P W + KV +A VD T + + S G+RG+PT+K+
Sbjct: 82 VMFFAPWCGHCQRLQPTWNDLGDKYNSMEDAKVYVAKVDCTAHSDVCSAQGVRGYPTLKL 141
Query: 837 FQKGESPVDYDGGRTRSDIVTRALDLFSDNAPPPE 941
F+ G+ V Y G R + L ++ PE
Sbjct: 142 FKPGQEAVKYQGPRDFQTLENWMLQTLNEEPVTPE 176
>ref|NP_061854.1| dnaJ homolog subfamily C member 10 precursor [Homo sapiens].
Length = 793
Score = 115 bits (289), Expect = 1e-25
Identities = 69/223 (30%), Positives = 98/223 (43%), Gaps = 6/223 (2%)
Frame = +3
Query: 189 VIELTPSNFNREVIQS--DSLWLVEFYAPWCGHCQRLTPEWKKVATXXXXXXXXXXXXXX 362
V+ LTP+ FN V Q + +W+V+FY+PWC CQ L PEWK++A
Sbjct: 558 VVSLTPTTFNELVTQRKHNEVWMVDFYSPWCHPCQVLMPEWKRMARTLTGLINVGSIDCQ 617
Query: 363 XHQSLGGQYGVQGFPTIKIFGSNKNRPEDYQG----GRTGEAIVDAALSALRQLVKDXXX 530
+ S Q VQ +P I+ F N+ Y R ++ L L Q+ D
Sbjct: 618 QYHSFCAQENVQRYPEIRFFPPKSNKAYHYHSYNGWNRDAYSLRIWGLGFLPQVSTD--- 674
Query: 531 XXXXXXXXXXXXXXEGSGKKDVIELTDDTFDKNVLDSEDVWMVEFYAPWCGHCKNLEPEW 710
LT TF + VL ++ W+++FYAPWCG C+N PE+
Sbjct: 675 ------------------------LTPQTFSEKVLQGKNHWVIDFYAPWCGPCQNFAPEF 710
Query: 711 AAAATEVKEQTKGKVKLAAVDATVNQVLASRYGIRGFPTIKIF 839
A + KGKVK VD + GIR +PT+K +
Sbjct: 711 ELLARMI----KGKVKAGKVDCQAYAQTCQKAGIRAYPTVKFY 749
Score = 91.7 bits (226), Expect = 2e-18
Identities = 57/224 (25%), Positives = 94/224 (41%), Gaps = 2/224 (0%)
Frame = +3
Query: 174 SSSDDVIELTPSNFNREVIQSDSLWLVEFYAPWCGHCQRLTPEWKKVATXXXXXXXXXXX 353
S + V L P NF WLV+F+APWC C+ L PE ++ +
Sbjct: 450 SVNSHVTTLGPQNFPAN---DKEPWLVDFFAPWCPPCRALLPELRRASNLLYGQLKFGTL 506
Query: 354 XXXXHQSLGGQYGVQGFPTIKIFGSNKNRPEDYQGGRTGEAIVDAALSALRQLVKDXXXX 533
H+ L Y +Q +PT +F N++ +Y+G + E I++
Sbjct: 507 DCTVHEGLCNMYNIQAYPTTVVF--NQSNIHEYEGHHSAEQILE---------------- 548
Query: 534 XXXXXXXXXXXXXEGSGKKDVIELTDDTFDKNVLDSE--DVWMVEFYAPWCGHCKNLEPE 707
E V+ LT TF++ V + +VWMV+FY+PWC C+ L PE
Sbjct: 549 -----------FIEDLMNPSVVSLTPTTFNELVTQRKHNEVWMVDFYSPWCHPCQVLMPE 597
Query: 708 WAAAATEVKEQTKGKVKLAAVDATVNQVLASRYGIRGFPTIKIF 839
W A + G + + ++D ++ ++ +P I+ F
Sbjct: 598 WKRMARTL----TGLINVGSIDCQQYHSFCAQENVQRYPEIRFF 637
Score = 71.6 bits (174), Expect = 2e-12
Identities = 36/106 (33%), Positives = 61/106 (57%)
Frame = +3
Query: 591 DVIELTDDTFDKNVLDSEDVWMVEFYAPWCGHCKNLEPEWAAAATEVKEQTKGKVKLAAV 770
++I L FD V +S ++W V FY+P C HC +L P W A EV G +++ AV
Sbjct: 130 EIITLERREFDAAV-NSGELWFVNFYSPGCSHCHDLAPTWRDFAKEV----DGLLRIGAV 184
Query: 771 DATVNQVLASRYGIRGFPTIKIFQKGESPVDYDGGRTRSDIVTRAL 908
+ +++L G+ +P++ IF+ G +PV Y G R++ +V+ A+
Sbjct: 185 NCGDDRMLCRMKGVNSYPSLFIFRSGMAPVKYHGDRSKESLVSFAM 230
Score = 62.8 bits (151), Expect = 1e-09
Identities = 36/119 (30%), Positives = 52/119 (43%)
Frame = +3
Query: 165 GLYSSSDDVIELTPSNFNREVIQSDSLWLVEFYAPWCGHCQRLTPEWKKVATXXXXXXXX 344
G+Y ++I L F+ V S LW V FY+P C HC L P W+ A
Sbjct: 123 GIYDDDPEIITLERREFDAAV-NSGELWFVNFYSPGCSHCHDLAPTWRDFAKEVDGLLRI 181
Query: 345 XXXXXXXHQSLGGQYGVQGFPTIKIFGSNKNRPEDYQGGRTGEAIVDAALSALRQLVKD 521
+ L GV +P++ IF S P Y G R+ E++V A+ +R V +
Sbjct: 182 GAVNCGDDRMLCRMKGVNSYPSLFIFRSGM-APVKYHGDRSKESLVSFAMQHVRSTVTE 239
Score = 61.2 bits (147), Expect = 3e-09
Identities = 28/98 (28%), Positives = 50/98 (51%), Gaps = 3/98 (3%)
Frame = +3
Query: 195 ELTPSNFNREVIQSDSLWLVEFYAPWCGHCQRLTPEWKKVATXXXXXXXXXXXXXXXHQS 374
+LTP F+ +V+Q + W+++FYAPWCG CQ PE++ +A +
Sbjct: 674 DLTPQTFSEKVLQGKNHWVIDFYAPWCGPCQNFAPEFELLARMIKGKVKAGKVDCQAYAQ 733
Query: 375 LGGQYGVQGFPTIKIF---GSNKNRPEDYQGGRTGEAI 479
+ G++ +PT+K + + +N E+ R +AI
Sbjct: 734 TCQKAGIRAYPTVKFYFYERAKRNFQEEQINTRDAKAI 771
Score = 56.6 bits (135), Expect = 8e-08
Identities = 28/95 (29%), Positives = 52/95 (54%)
Frame = +3
Query: 636 DSEDVWMVEFYAPWCGHCKNLEPEWAAAATEVKEQTKGKVKLAAVDATVNQVLASRYGIR 815
+ ++ W+V+F+APWC C+ L PE A+ + G++K +D TV++ L + Y I+
Sbjct: 466 NDKEPWLVDFFAPWCPPCRALLPELRRASNLL----YGQLKFGTLDCTVHEGLCNMYNIQ 521
Query: 816 GFPTIKIFQKGESPVDYDGGRTRSDIVTRALDLFS 920
+PT +F + +Y+G + I+ DL +
Sbjct: 522 AYPTTVVFNQSNIH-EYEGHHSAEQILEFIEDLMN 555
>ref|NP_006801.1| protein disulfide-isomerase A5 precursor [Homo sapiens].
Length = 519
Score = 113 bits (283), Expect = 5e-25
Identities = 75/225 (33%), Positives = 109/225 (48%), Gaps = 3/225 (1%)
Frame = +3
Query: 186 DVIEL-TPSNFNREVIQSDSLWLVEFYAPWCGHCQRLTPEWKKVATXXXXXXXXXXXXXX 362
DV+ L + +F R + + + L+ FYAPWC C+R+ P ++K AT
Sbjct: 152 DVVHLDSEKDFRRLLKKEEKPLLIMFYAPWCSMCKRMMPHFQKAATQLRGHAVLAGMNVY 211
Query: 363 XHQ--SLGGQYGVQGFPTIKIFGSNKNRPEDYQGGRTGEAIVDAALSALRQLVKDXXXXX 536
+ ++ +Y V+GFPTI F + + G T E IV+ +
Sbjct: 212 SSEFENIKEEYSVRGFPTICYFEKGRFLFQYDNYGSTAEDIVEWLKNP----------QP 261
Query: 537 XXXXXXXXXXXXEGSGKKDVIELTDDTFDKNVLDSEDVWMVEFYAPWCGHCKNLEPEWAA 716
EG V LTD+ FD+ V + V +V F+APWCGHCK ++PE+
Sbjct: 262 PQPQVPETPWADEGGS---VYHLTDEDFDQFVKEHSSV-LVMFHAPWCGHCKKMKPEFEK 317
Query: 717 AATEVKEQTKGKVKLAAVDATVNQVLASRYGIRGFPTIKIFQKGE 851
AA + + LAAVDATVN+ LA R+ I FPT+K F+ GE
Sbjct: 318 AAEALHGEADSSGVLAAVDATVNKALAERFHISEFPTLKYFKNGE 362
Score = 89.4 bits (220), Expect = 1e-17
Identities = 65/237 (27%), Positives = 103/237 (43%), Gaps = 6/237 (2%)
Frame = +3
Query: 189 VIELTPSNFNREVIQSDSLWLVEFYAPWCGHCQRLTPEWKKVATXXXXXXXXXXXXXXX- 365
V LT +F++ V + S+ LV F+APWCGHC+++ PE++K A
Sbjct: 278 VYHLTDEDFDQFVKEHSSV-LVMFHAPWCGHCKKMKPEFEKAAEALHGEADSSGVLAAVD 336
Query: 366 ---HQSLGGQYGVQGFPTIKIFGSNKNRPEDYQGGRTGEAIVDAALSALRQLVKDXXXXX 536
+++L ++ + FPT+K F + GE L ++ ++
Sbjct: 337 ATVNKALAERFHISEFPTLKYF-------------KNGEKYAVPVLRTKKKFLEWMQNPE 383
Query: 537 XXXXXXXXXXXXEGSGKKDVIELTDDTFDKNVLDSEDVWMVEFYAPWCGHCKNLEPEWAA 716
+ S V+ L D F + L + +V FYAPWC HCK + P + A
Sbjct: 384 APPPPEPTWEEQQTS----VLHLVGDNF-RETLKKKKHTLVMFYAPWCPHCKKVIPHFTA 438
Query: 717 AATEVKEQTKGKVKLAAVDAT--VNQVLASRYGIRGFPTIKIFQKGESPVDYDGGRT 881
A K+ K+ AAVD NQ L + ++G+PT + G+ YD RT
Sbjct: 439 TADAFKDDR--KIACAAVDCVKDKNQDLCQQEAVKGYPTFHYYHYGKFAEKYDSDRT 493
Score = 68.6 bits (166), Expect = 2e-11
Identities = 44/127 (34%), Positives = 63/127 (49%), Gaps = 4/127 (3%)
Frame = +3
Query: 573 EGSGKKDVIELTDDTFDKNVLDSEDV-WMVEFYAPWCGHCKNLEPEWAAAATEVKEQTKG 749
E G KDV+ L + + +L E+ ++ FYAPWC CK + P + AAT Q +G
Sbjct: 146 EDPGAKDVVHLDSEKDFRRLLKKEEKPLLIMFYAPWCSMCKRMMPHFQKAAT----QLRG 201
Query: 750 KVKLAAVDATVNQV--LASRYGIRGFPTIKIFQKGESPVDYDG-GRTRSDIVTRALDLFS 920
LA ++ ++ + Y +RGFPTI F+KG YD G T DIV +
Sbjct: 202 HAVLAGMNVYSSEFENIKEEYSVRGFPTICYFEKGRFLFQYDNYGSTAEDIVE-----WL 256
Query: 921 DNAPPPE 941
N PP+
Sbjct: 257 KNPQPPQ 263
>ref|NP_005304.3| protein disulfide-isomerase A3 precursor [Homo sapiens].
Length = 505
Score = 112 bits (279), Expect = 2e-24
Identities = 64/170 (37%), Positives = 91/170 (53%), Gaps = 2/170 (1%)
Frame = +3
Query: 591 DVIELTDDTFDKNVLD--SEDVWMVEFYAPWCGHCKNLEPEWAAAATEVKEQTKGKVKLA 764
DV+ELTDD F+ + D S + +VEF+APWCGHCK L PE+ AAAT +K G V LA
Sbjct: 26 DVLELTDDNFESRISDTGSAGLMLVEFFAPWCGHCKRLAPEYEAAATRLK----GIVPLA 81
Query: 765 AVDATVNQVLASRYGIRGFPTIKIFQKGESPVDYDGGRTRSDIVTRALDLFSDNAPPPEL 944
VD T N ++YG+ G+PT+KIF+ GE YDG RT IV+ P
Sbjct: 82 KVDCTANTNTCNKYGVSGYPTLKIFRDGEEAGAYDGPRTADGIVSHL-----KKQAGPAS 136
Query: 945 LEIISEDVAKKSCEEHQLCVVAVLPHILDTGAAGRNSYLEVLLKLADKYK 1094
+ + +E+ KK + +V D+ + + +L+ L D Y+
Sbjct: 137 VPLRTEEEFKKFISDKDASIVGFFD---DSFSEAHSEFLKAASNLRDNYR 183
Score = 79.7 bits (195), Expect = 8e-15
Identities = 41/105 (39%), Positives = 58/105 (55%), Gaps = 2/105 (1%)
Frame = +3
Query: 174 SSSDDVIELTPSNFNREVIQSDS--LWLVEFYAPWCGHCQRLTPEWKKVATXXXXXXXXX 347
+++ DV+ELT NF + + S L LVEF+APWCGHC+RL PE++ AT
Sbjct: 22 AAASDVLELTDDNFESRISDTGSAGLMLVEFFAPWCGHCKRLAPEYEAAATRLKGIVPLA 81
Query: 348 XXXXXXHQSLGGQYGVQGFPTIKIFGSNKNRPEDYQGGRTGEAIV 482
+ + +YGV G+PT+KIF + Y G RT + IV
Sbjct: 82 KVDCTANTNTCNKYGVSGYPTLKIFRDGEEAGA-YDGPRTADGIV 125
Score = 77.0 bits (188), Expect = 5e-14
Identities = 47/124 (37%), Positives = 68/124 (54%), Gaps = 2/124 (1%)
Frame = +3
Query: 612 DTFDKNVLDSEDVWMVEFYAPWCGHCKNLEPEWAAAATEVKEQTKGKVKLAAVDATVNQV 791
+ FD+ V + ++EFYAPWCGHCKNLEP++ ++ + + +A +DAT N V
Sbjct: 384 ENFDEIVNNENKDVLIEFYAPWCGHCKNLEPKYKELGEKLSKDP--NIVIAKMDATANDV 441
Query: 792 LASRYGIRGFPTIKI--FQKGESPVDYDGGRTRSDIVTRALDLFSDNAPPPELLEIISED 965
S Y +RGFPTI K +P Y+GGR SD ++ L + PP +I E+
Sbjct: 442 -PSPYEVRGFPTIYFSPANKKLNPKKYEGGRELSDFISY---LQREATNPP----VIQEE 493
Query: 966 VAKK 977
KK
Sbjct: 494 KPKK 497
Score = 58.5 bits (140), Expect = 2e-08
Identities = 33/99 (33%), Positives = 48/99 (48%), Gaps = 2/99 (2%)
Frame = +3
Query: 174 SSSDDVIELTPSNFNREVIQSDSLWLVEFYAPWCGHCQRLTPEWKKVA-TXXXXXXXXXX 350
S+ V + NF+ V + L+EFYAPWCGHC+ L P++K++
Sbjct: 373 SNDGPVKVVVAENFDEIVNNENKDVLIEFYAPWCGHCKNLEPKYKELGEKLSKDPNIVIA 432
Query: 351 XXXXXHQSLGGQYGVQGFPTIKIFGSNKN-RPEDYQGGR 464
+ Y V+GFPTI +NK P+ Y+GGR
Sbjct: 433 KMDATANDVPSPYEVRGFPTIYFSPANKKLNPKKYEGGR 471
>ref|NP_061895.3| protein disulfide-isomerase TMX3 precursor [Homo sapiens].
Length = 454
Score = 97.1 bits (240), Expect = 5e-20
Identities = 46/103 (44%), Positives = 67/103 (65%)
Frame = +3
Query: 588 KDVIELTDDTFDKNVLDSEDVWMVEFYAPWCGHCKNLEPEWAAAATEVKEQTKGKVKLAA 767
K +E D++F +N ++D+W+V+FYAPWCGHCK LEP W E+K VK+
Sbjct: 25 KGFVEDLDESFKEN--RNDDIWLVDFYAPWCGHCKKLEPIWNEVGLEMK-SIGSPVKVGK 81
Query: 768 VDATVNQVLASRYGIRGFPTIKIFQKGESPVDYDGGRTRSDIV 896
+DAT +AS +G+RG+PTIK+ KG+ +Y G RT+ DI+
Sbjct: 82 MDATSYSSIASEFGVRGYPTIKLL-KGDLAYNYRGPRTKDDII 123
Score = 67.4 bits (163), Expect = 4e-11
Identities = 31/90 (34%), Positives = 51/90 (56%), Gaps = 3/90 (3%)
Frame = +3
Query: 231 QSDSLWLVEFYAPWCGHCQRLTPEWKKVA---TXXXXXXXXXXXXXXXHQSLGGQYGVQG 401
++D +WLV+FYAPWCGHC++L P W +V + S+ ++GV+G
Sbjct: 39 RNDDIWLVDFYAPWCGHCKKLEPIWNEVGLEMKSIGSPVKVGKMDATSYSSIASEFGVRG 98
Query: 402 FPTIKIFGSNKNRPEDYQGGRTGEAIVDAA 491
+PTIK+ + +Y+G RT + I++ A
Sbjct: 99 YPTIKLL--KGDLAYNYRGPRTKDDIIEFA 126
>ref|NP_000909.2| protein disulfide-isomerase precursor [Homo sapiens].
Length = 508
Score = 93.2 bits (230), Expect = 7e-19
Identities = 45/83 (54%), Positives = 59/83 (71%), Gaps = 2/83 (2%)
Frame = +3
Query: 654 MVEFYAPWCGHCKNLEPEWAAAATEVKEQTKGKVKLAAVDATVNQVLASRYGIRGFPTIK 833
+VEFYAPWCGHCK L PE+A AA ++K + +++LA VDAT LA +YG+RG+PTIK
Sbjct: 45 LVEFYAPWCGHCKALAPEYAKAAGKLKAE-GSEIRLAKVDATEESDLAQQYGVRGYPTIK 103
Query: 834 IFQKGE--SPVDYDGGRTRSDIV 896
F+ G+ SP +Y GR DIV
Sbjct: 104 FFRNGDTASPKEYTAGREADDIV 126
Score = 71.6 bits (174), Expect = 2e-12
Identities = 41/105 (39%), Positives = 53/105 (50%), Gaps = 4/105 (3%)
Frame = +3
Query: 183 DDVIELTPSNFNREVIQSDSLWLVEFYAPWCGHCQRLTPEWKKVA---TXXXXXXXXXXX 353
D V+ L SNF E + + LVEFYAPWCGHC+ L PE+ K A
Sbjct: 24 DHVLVLRKSNF-AEALAAHKYLLVEFYAPWCGHCKALAPEYAKAAGKLKAEGSEIRLAKV 82
Query: 354 XXXXHQSLGGQYGVQGFPTIKIF-GSNKNRPEDYQGGRTGEAIVD 485
L QYGV+G+PTIK F + P++Y GR + IV+
Sbjct: 83 DATEESDLAQQYGVRGYPTIKFFRNGDTASPKEYTAGREADDIVN 127
Score = 67.4 bits (163), Expect = 4e-11
Identities = 37/101 (36%), Positives = 52/101 (51%), Gaps = 2/101 (1%)
Frame = +3
Query: 585 KKDVIELTDDTFDKNVLDSEDVWMVEFYAPWCGHCKNLEPEWAAAATEVKEQTKGKVKLA 764
K+ V L F+ D + VEFYAPWCGHCK L P W K+ + +A
Sbjct: 366 KQPVKVLVGKNFEDVAFDEKKNVFVEFYAPWCGHCKQLAPIWDKLGETYKDHE--NIVIA 423
Query: 765 AVDATVNQVLASRYGIRGFPTIKIF--QKGESPVDYDGGRT 881
+D+T N+V A + + FPT+K F + +DY+G RT
Sbjct: 424 KMDSTANEVEAVK--VHSFPTLKFFPASADRTVIDYNGERT 462
Score = 53.5 bits (127), Expect = 6e-07
Identities = 30/91 (32%), Positives = 38/91 (41%), Gaps = 1/91 (1%)
Frame = +3
Query: 198 LTPSNFNREVIQSDSLWLVEFYAPWCGHCQRLTPEWKKVATXXXXXXXXXXXXXXXHQSL 377
L NF VEFYAPWCGHC++L P W K+ +
Sbjct: 372 LVGKNFEDVAFDEKKNVFVEFYAPWCGHCKQLAPIWDKLGETYKDHENIVIAKMDSTANE 431
Query: 378 GGQYGVQGFPTIKIFGSNKNRPE-DYQGGRT 467
V FPT+K F ++ +R DY G RT
Sbjct: 432 VEAVKVHSFPTLKFFPASADRTVIDYNGERT 462
>ref|NP_006840.2| protein disulfide-isomerase A2 precursor [Homo sapiens].
Length = 525
Score = 68.6 bits (166), Expect = 2e-11
Identities = 34/82 (41%), Positives = 48/82 (58%), Gaps = 2/82 (2%)
Frame = +3
Query: 654 MVEFYAPWCGHCKNLEPEWAAAATEVKEQTKGKVKLAAVDATVNQVLASRYGIRGFPTIK 833
+VEFYAPWCGHC+ L PE++ AA + ++ V LA VD + LA +G+ +PT+K
Sbjct: 63 LVEFYAPWCGHCQALAPEYSKAAAVLAAESM-VVTLAKVDGPAQRELAEEFGVTEYPTLK 121
Query: 834 IFQKGE--SPVDYDGGRTRSDI 893
F+ G P +Y G R I
Sbjct: 122 FFRNGNRTHPEEYTGPRDAEGI 143
Score = 66.2 bits (160), Expect = 1e-10
Identities = 33/83 (39%), Positives = 42/83 (50%), Gaps = 4/83 (4%)
Frame = +3
Query: 249 LVEFYAPWCGHCQRLTPEWKKVA---TXXXXXXXXXXXXXXXHQSLGGQYGVQGFPTIKI 419
LVEFYAPWCGHCQ L PE+ K A + L ++GV +PT+K
Sbjct: 63 LVEFYAPWCGHCQALAPEYSKAAAVLAAESMVVTLAKVDGPAQRELAEEFGVTEYPTLKF 122
Query: 420 F-GSNKNRPEDYQGGRTGEAIVD 485
F N+ PE+Y G R E I +
Sbjct: 123 FRNGNRTHPEEYTGPRDAEGIAE 145
Score = 63.5 bits (153), Expect = 6e-10
Identities = 33/88 (37%), Positives = 47/88 (53%)
Frame = +3
Query: 585 KKDVIELTDDTFDKNVLDSEDVWMVEFYAPWCGHCKNLEPEWAAAATEVKEQTKGKVKLA 764
++ V L F++ D V+FYAPWC HCK + P W A A K Q + +A
Sbjct: 387 QRPVKTLVGKNFEQVAFDETKNVFVKFYAPWCTHCKEMAPAWEALAE--KYQDHEDIIIA 444
Query: 765 AVDATVNQVLASRYGIRGFPTIKIFQKG 848
+DAT N++ A + + GFPT+K F G
Sbjct: 445 ELDATANELDA--FAVHGFPTLKYFPAG 470
Database: RefSeq49_HP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,297,164
Number of sequences in database: 32,964
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 32964
Number of Hits to DB: 66,023,559
Number of extensions: 1617815
Number of successful extensions: 6410
Number of sequences better than 1.0e-05: 15
Number of HSP's gapped: 6351
Number of HSP's successfully gapped: 44
Length of query: 621
Length of database: 18,297,164
Length adjustment: 109
Effective length of query: 512
Effective length of database: 14,704,088
Effective search space: 7528493056
Effective search space used: 7528493056
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to Sscrofa10_2
BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-012612
(1865 letters)
Database: Sscrofa_10.2.fasta
4582 sequences; 2,808,509,378 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Sscrofa_Chr03 924 0.0
>Sscrofa_Chr03
|| Length = 144787322
Score = 924 bits (466), Expect = 0.0
Identities = 466/466 (100%)
Strand = Plus / Minus
Query: 1363 agcttcccgtggaagacgacatcgacctgagcgacgtggagctggacgacctggagaagg 1422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 134582175 agcttcccgtggaagacgacatcgacctgagcgacgtggagctggacgacctggagaagg 134582116
Query: 1423 atgagttgtgaggcgctcggcccagacttcagttctcttttcttgggagcagattttcca 1482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 134582115 atgagttgtgaggcgctcggcccagacttcagttctcttttcttgggagcagattttcca 134582056
Query: 1483 gcagtgaaggaacacgcttcacaaacagatgactctaccagtggcctttttaaccaagaa 1542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 134582055 gcagtgaaggaacacgcttcacaaacagatgactctaccagtggcctttttaaccaagaa 134581996
Query: 1543 gtagcactcgatccgtcatttgaaaacactgcggcagggaacgtgtgcgtctcaagaaaa 1602
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 134581995 gtagcactcgatccgtcatttgaaaacactgcggcagggaacgtgtgcgtctcaagaaaa 134581936
Query: 1603 tgatgcgacattctatgaattgtcgtagccagtgaattgggttgtattctgtcactattt 1662
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 134581935 tgatgcgacattctatgaattgtcgtagccagtgaattgggttgtattctgtcactattt 134581876
Query: 1663 tgaagaaagcggatgggctgttgaaacctttccctccctcctctgactgctgcttgagtg 1722
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 134581875 tgaagaaagcggatgggctgttgaaacctttccctccctcctctgactgctgcttgagtg 134581816
Query: 1723 ttcgcggaggctgtttcctacatccaagttttttaatgtgatcctttcatttgaatatta 1782
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 134581815 ttcgcggaggctgtttcctacatccaagttttttaatgtgatcctttcatttgaatatta 134581756
Query: 1783 atggcttttttccattaaagaataaaacggtattttggacaatgcc 1828
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 134581755 atggcttttttccattaaagaataaaacggtattttggacaatgcc 134581710
Score = 319 bits (161), Expect = 3e-84
Identities = 161/161 (100%)
Strand = Plus / Minus
Query: 1108 ggtggctgtggacagaggccggagcccagaccgaactggagcacgcgctgggcatcggag 1167
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 134586135 ggtggctgtggacagaggccggagcccagaccgaactggagcacgcgctgggcatcggag 134586076
Query: 1168 gctttggctaccctgccatggctgccatcaacgcccgcaagatgaagtttgctctgctaa 1227
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 134586075 gctttggctaccctgccatggctgccatcaacgcccgcaagatgaagtttgctctgctaa 134586016
Query: 1228 aaggatctttcagtgagcaaggcattaacgagtttctcagg 1268
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 134586015 aaggatctttcagtgagcaaggcattaacgagtttctcagg 134585975
Score = 287 bits (145), Expect = 1e-74
Identities = 145/145 (100%)
Strand = Plus / Minus
Query: 129 ggtctgatgagctgtaccctcttcgtagcagttaatggtctctattcatctagtgacgat 188
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 134599576 ggtctgatgagctgtaccctcttcgtagcagttaatggtctctattcatctagtgacgat 134599517
Query: 189 gtcatcgaattaacgccgtcaaatttcaaccgagaagtcatccaaagtgatagtttgtgg 248
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 134599516 gtcatcgaattaacgccgtcaaatttcaaccgagaagtcatccaaagtgatagtttgtgg 134599457
Query: 249 ctcgtagaattctatgctccttggt 273
|||||||||||||||||||||||||
Sbjct: 134599456 ctcgtagaattctatgctccttggt 134599432
Score = 274 bits (138), Expect = 2e-70
Identities = 141/142 (99%)
Strand = Plus / Minus
Query: 809 gatcagaggatttcctaccatcaagatctttcagaaaggcgagtcccccgtggattacga 868
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 134588521 gatcagaggatttcctaccatcaagatctttcagaagggcgagtcccccgtggattacga 134588462
Query: 869 cggggggcggacgcggtccgacatcgttacccgggctcttgatctgttttcggataacgc 928
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 134588461 cggggggcggacgcggtccgacatcgttacccgggctcttgatctgttttcggataacgc 134588402
Query: 929 cccgccccctgagctgctcgag 950
||||||||||||||||||||||
Sbjct: 134588401 cccgccccctgagctgctcgag 134588380
Score = 260 bits (131), Expect = 2e-66
Identities = 131/131 (100%)
Strand = Plus / Minus
Query: 564 ggtagaagcgaaggttcgggtaagaaggacgtgattgagctgacggacgacacctttgat 623
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 134589542 ggtagaagcgaaggttcgggtaagaaggacgtgattgagctgacggacgacacctttgat 134589483
Query: 624 aagaacgttctcgacagcgaagatgtttggatggttgagttctatgctccttggtgtgga 683
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 134589482 aagaacgttctcgacagcgaagatgtttggatggttgagttctatgctccttggtgtgga 134589423
Query: 684 cactgcaaaaa 694
|||||||||||
Sbjct: 134589422 cactgcaaaaa 134589412
Score = 256 bits (129), Expect = 4e-65
Identities = 129/129 (100%)
Strand = Plus / Minus
Query: 330 gatgtggtgaaggttggcgcggtcgacgcagacaagcatcagtccctgggcgggcagtac 389
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 134595245 gatgtggtgaaggttggcgcggtcgacgcagacaagcatcagtccctgggcgggcagtac 134595186
Query: 390 ggcgtgcagggctttcccaccatcaagatcttcggctccaacaaaaacagacccgaagat 449
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 134595185 ggcgtgcagggctttcccaccatcaagatcttcggctccaacaaaaacagacccgaagat 134595126
Query: 450 tatcagggt 458
|||||||||
Sbjct: 134595125 tatcagggt 134595117
Score = 220 bits (111), Expect = 2e-54
Identities = 114/115 (99%)
Strand = Plus / Minus
Query: 695 tctagagccagagtgggccgcggcagccacggaggtgaaggagcagaccaagggcaaggt 754
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 134589018 tctagagccagagtgggccgcggcagccacggaggtgaaggagcagaccaagggcaaggt 134588959
Query: 755 gaagctcgcggccgtggacgccactgtgaaccaggtcctcgccagccggtacggg 809
|||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 134588958 gaagctcgcggccgtggacgccaccgtgaaccaggtcctcgccagccggtacggg 134588904
Score = 216 bits (109), Expect = 3e-53
Identities = 109/109 (100%)
Strand = Plus / Minus
Query: 456 ggtggcaggacgggtgaagccatcgtggacgccgctctcagcgctctgcgccagctcgtg 515
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 134592375 ggtggcaggacgggtgaagccatcgtggacgccgctctcagcgctctgcgccagctcgtg 134592316
Query: 516 aaggatcgcctggggggccgcgggggtggctatagttctggaaaacaag 564
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 134592315 aaggatcgcctggggggccgcgggggtggctatagttctggaaaacaag 134592267
Score = 198 bits (100), Expect = 8e-48
Identities = 100/100 (100%)
Strand = Plus / Minus
Query: 1265 cagggagctgtctttcgggcgcgggtccacggcgcccgtgggaggcggggcgttcccggc 1324
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 134582952 cagggagctgtctttcgggcgcgggtccacggcgcccgtgggaggcggggcgttcccggc 134582893
Query: 1325 catcagcaccagggagccttgggacggcaaggatggcgag 1364
||||||||||||||||||||||||||||||||||||||||
Sbjct: 134582892 catcagcaccagggagccttgggacggcaaggatggcgag 134582853
Score = 174 bits (88), Expect = 1e-40
Identities = 88/88 (100%)
Strand = Plus / Minus
Query: 949 agatcatcagcgaggacgtcgccaagaagtcgtgcgaggagcaccagctctgcgtggtgg 1008
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 134587290 agatcatcagcgaggacgtcgccaagaagtcgtgcgaggagcaccagctctgcgtggtgg 134587231
Query: 1009 ccgtgctgccgcatattctcgacacggg 1036
||||||||||||||||||||||||||||
Sbjct: 134587230 ccgtgctgccgcatattctcgacacggg 134587203
Score = 151 bits (76), Expect = 2e-33
Identities = 76/76 (100%)
Strand = Plus / Minus
Query: 1035 ggagctgcaggcagaaattcttacttggaagttcttctgaagctggcagacaagtacaaa 1094
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 134587077 ggagctgcaggcagaaattcttacttggaagttcttctgaagctggcagacaagtacaaa 134587018
Query: 1095 aagaaaatgtgggggt 1110
||||||||||||||||
Sbjct: 134587017 aagaaaatgtgggggt 134587002
Score = 133 bits (67), Expect = 4e-28
Identities = 67/67 (100%)
Strand = Plus / Minus
Query: 65 agaagtgaggtggtggctggactgcacgacggcggaggtgctcggcatggctcgcctggt 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 134604305 agaagtgaggtggtggctggactgcacgacggcggaggtgctcggcatggctcgcctggt 134604246
Query: 125 cctcggt 131
|||||||
Sbjct: 134604245 cctcggt 134604239
Score = 119 bits (60), Expect = 6e-24
Identities = 60/60 (100%)
Strand = Plus / Minus
Query: 271 ggtgtggccactgccaaaggttgacaccggagtggaagaaggtagcaactgcattaaaag 330
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 134595742 ggtgtggccactgccaaaggttgacaccggagtggaagaaggtagcaactgcattaaaag 134595683
Score = 61.9 bits (31), Expect = 1e-06
Identities = 31/31 (100%)
Strand = Plus / Minus
Query: 1331 caccagggagccttgggacggcaaggatggc 1361
|||||||||||||||||||||||||||||||
Sbjct: 134582796 caccagggagccttgggacggcaaggatggc 134582766
Database: Sscrofa_10.2.fasta
Posted date: Nov 16, 2011 10:34 AM
Number of letters in database: 2,808,509,378
Number of sequences in database: 4582
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4582
Number of Hits to DB: 46,206,246
Number of extensions: 268
Number of successful extensions: 268
Number of sequences better than 1.0e-05: 1
Number of HSP's gapped: 268
Number of HSP's successfully gapped: 14
Length of query: 1865
Length of database: 2,808,509,378
Length adjustment: 22
Effective length of query: 1843
Effective length of database: 2,808,408,574
Effective search space: 5175897001882
Effective search space used: 5175897001882
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 18 (36.2 bits)
S2: 30 (60.0 bits)