Search to RefSeqBP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-012619
(1035 letters)
Database: RefSeq49_BP.fasta
33,088 sequences; 17,681,374 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001069710.1| GA-binding protein subunit beta-2 [Bos tauru... 434 e-122
Alignment gi|NP_001069272.1| GA-binding protein subunit beta-1 [Bos tauru... 372 e-103
Alignment gi|XP_002691018.1| PREDICTED: GA binding protein transcription ... 303 2e-82
Alignment gi|NP_001192406.1| ankyrin repeat domain-containing protein 6 [... 96 7e-20
Alignment gi|XP_002690227.1| PREDICTED: ankyrin repeat domain 6 [Bos taur... 96 7e-20
Alignment gi|XP_002698771.1| PREDICTED: ankyrin 1, erythrocytic [Bos taur... 91 2e-18
Alignment gi|XP_002703365.1| PREDICTED: ankyrin 1, erythrocytic [Bos taur... 91 2e-18
Alignment gi|NP_001193089.1| tankyrase-1 [Bos taurus]. 88 1e-17
Alignment gi|XP_002698732.1| PREDICTED: TRF1-interacting ankyrin-related ... 88 1e-17
Alignment gi|XP_001787700.1| PREDICTED: ankyrin 2 [Bos taurus]. 87 3e-17
>ref|NP_001069710.1| GA-binding protein subunit beta-2 [Bos taurus].
Length = 418
Score = 434 bits (1115), Expect = e-122
Identities = 229/277 (82%), Positives = 235/277 (84%), Gaps = 39/277 (14%)
Frame = +2
Query: 320 LGTSPLHLAAQYGHYSTAEVLLRAGVSRDARTKVDRTPLHMAAADGHAHIVELLVRNGAD 499
LGTSPLHLAAQYGHYSTAEVLLRAGVSRDARTKVDRTPLHMAAADGHAHIVELLVRNGAD
Sbjct: 8 LGTSPLHLAAQYGHYSTAEVLLRAGVSRDARTKVDRTPLHMAAADGHAHIVELLVRNGAD 67
Query: 500 VNAKDMLKMTALHWATEHHHRDVVELLIKYGADVHAFSKFDKSAFDIALEKNNAEILVIL 679
VNAKDMLKMTALHWATEHHHRDVVELLIKYGADVHAFSKFDKSAFDIALEKNNAEILVIL
Sbjct: 68 VNAKDMLKMTALHWATEHHHRDVVELLIKYGADVHAFSKFDKSAFDIALEKNNAEILVIL 127
Query: 680 QEAMQNQVNANPERANSVTMATPFIFTSGEVVNLASLVNSANTKTTSG------------ 823
QEAMQNQVNANPERAN VTMATPFIFTSGEVVNLASLV+SA+TKTTSG
Sbjct: 128 QEAMQNQVNANPERANPVTMATPFIFTSGEVVNLASLVSSASTKTTSGDPHASSTVHFSN 187
Query: 824 ---------------------------NSEEIIDGNSVDSSIQQVVGSGGQRVITIVTDG 922
NSEEII+GNSVDSSIQQVVGSGGQRVITIVTDG
Sbjct: 188 STTSVLATLAALAEASAPLSNSHRATANSEEIIEGNSVDSSIQQVVGSGGQRVITIVTDG 247
Query: 923 VPLGNIQAAVPTGGIGQPFIVTMQDGQQVLTVPAGQV 1033
+PLGNIQ A+P GGIGQPFIVT+QDGQQVLTVPAGQV
Sbjct: 248 IPLGNIQTAIPAGGIGQPFIVTVQDGQQVLTVPAGQV 284
>ref|NP_001069272.1| GA-binding protein subunit beta-1 [Bos taurus].
Length = 383
Score = 372 bits (956), Expect = e-103
Identities = 201/306 (65%), Positives = 233/306 (76%), Gaps = 32/306 (10%)
Frame = +2
Query: 212 MSLVDLGKRLLEAARKGQDDEVRTLMANGAPFTTDWLGTSPLHLAAQYGHYSTAEVLLRA 391
MSLVDLGK+LLEAAR GQDDEVR LMANGAPFTTDWLGTSPLHLAAQYGHYST EVLLRA
Sbjct: 1 MSLVDLGKKLLEAARAGQDDEVRILMANGAPFTTDWLGTSPLHLAAQYGHYSTTEVLLRA 60
Query: 392 GVSRDARTKVDRTPLHMAAADGHAHIVELLVRNGADVNAKDMLKMTALHWATEHHHRDVV 571
GVSRDARTKVDRTPLHMAA++GHA IVE+L+++GADVNAKDMLKMTALHWATEH+H++VV
Sbjct: 61 GVSRDARTKVDRTPLHMAASEGHASIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVV 120
Query: 572 ELLIKYGADVHAFSKFDKSAFDIALEKNNAEILVILQEAMQNQVNANPERANSVTM--AT 745
ELLIKYGADVH SKF K+AFDI+++ N ++ ILQ AMQNQ+N NPE ++VT+ AT
Sbjct: 121 ELLIKYGADVHTQSKFCKTAFDISIDNGNEDLAEILQIAMQNQINTNPESPDTVTIHAAT 180
Query: 746 P-FIFTSGEVVNL-----------------------------ASLVNSANTKTTSGNSEE 835
P FI G VVNL A L NS+ T + +EE
Sbjct: 181 PQFIIGPGGVVNLTDETGVSAVQFGNSSTSVLATLAALAEASAPLSNSSETPVVA--TEE 238
Query: 836 IIDGNSVDSSIQQVVGSGGQRVITIVTDGVPLGNIQAAVPTGGIGQPFIVTMQDGQQVLT 1015
++ SVD +IQQVV SGGQ+VITIVTDG+ LGN+ ++PT GIGQP IVTM DGQQVLT
Sbjct: 239 VVTAESVDGAIQQVVSSGGQQVITIVTDGIQLGNLH-SIPTSGIGQPIIVTMPDGQQVLT 297
Query: 1016 VPAGQV 1033
VPA +
Sbjct: 298 VPATDI 303
>ref|XP_002691018.1| PREDICTED: GA binding protein transcription factor, beta subunit 1
isoform beta 1-like [Bos taurus].
Length = 245
Score = 303 bits (775), Expect = 2e-82
Identities = 160/222 (72%), Positives = 183/222 (82%), Gaps = 5/222 (2%)
Frame = +2
Query: 212 MSLVDLGKRLLEAARKGQDDEVRTLMANGAPFTTDWLGTSPLHLAAQYGHYSTAEVLLRA 391
MSLVDLGK+LLEAAR GQDDEVR LMANGAPFTTDWLGTSPLHLAAQYGHYST EVLLRA
Sbjct: 1 MSLVDLGKKLLEAARAGQDDEVRILMANGAPFTTDWLGTSPLHLAAQYGHYSTTEVLLRA 60
Query: 392 GVSRDARTKVDRTPLHMAAADGHAHIVELLVRNGADVNAKDMLKMTALHWATEHHHRDVV 571
GVSRDARTKVDRTPLHMAA++GHA IVE+L+++GADVNAKDMLKMTALHWATEH+H++VV
Sbjct: 61 GVSRDARTKVDRTPLHMAASEGHASIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVV 120
Query: 572 ELLIKYGADVHAFSKFDKSAFDIALEKNNAEILVILQEAMQNQVNANPERANSVTM--AT 745
ELLIKYGADVH SKF K+AFDI+++ N ++ ILQ AMQNQ+N NPE ++VT+ AT
Sbjct: 121 ELLIKYGADVHTQSKFCKTAFDISIDNGNEDLAEILQIAMQNQINTNPESPDTVTIHAAT 180
Query: 746 P-FIFTSGEVVNLASLVNSAN-TKTTSGNSEEIID-GNSVDS 862
P FI G VVNL LV+S N +K T + GNS S
Sbjct: 181 PQFIIGPGGVVNLTGLVSSENSSKATDETGVSAVQFGNSSTS 222
>ref|NP_001192406.1| ankyrin repeat domain-containing protein 6 [Bos taurus].
Length = 724
Score = 95.5 bits (236), Expect = 7e-20
Identities = 55/151 (36%), Positives = 84/151 (55%)
Frame = +2
Query: 227 LGKRLLEAARKGQDDEVRTLMANGAPFTTDWLGTSPLHLAAQYGHYSTAEVLLRAGVSRD 406
L +RLL AA KGQ + V L+ GA G +PLHLAA GH S ++LL+AG D
Sbjct: 10 LSERLLIAAYKGQTENVVQLINKGAKVAVTKHGRTPLHLAANKGHLSVVQILLKAGCDLD 69
Query: 407 ARTKVDRTPLHMAAADGHAHIVELLVRNGADVNAKDMLKMTALHWATEHHHRDVVELLIK 586
+ D+T LH A G+ ++ L++ G ++ +D TALH A+ H +LL+K
Sbjct: 70 VQDDGDQTALHRATVVGNTEVIAALIQEGCALDRQDKDGNTALHEASWHGFSQSAKLLVK 129
Query: 587 YGADVHAFSKFDKSAFDIALEKNNAEILVIL 679
GA+V A +K +A +A + ++A+ +L
Sbjct: 130 AGANVLAKNKAGNTALHLACQNSHAQSTRVL 160
Score = 74.7 bits (182), Expect = 1e-13
Identities = 49/153 (32%), Positives = 76/153 (49%), Gaps = 1/153 (0%)
Frame = +2
Query: 239 LLEAARKGQDDEVRTLMANGAP-FTTDWLGTSPLHLAAQYGHYSTAEVLLRAGVSRDART 415
L EA+ G + L+ GA + G + LHLA Q H + VLL G D +
Sbjct: 112 LHEASWHGFSQSAKLLVKAGANVLAKNKAGNTALHLACQNSHAQSTRVLLLGGSRADLKN 171
Query: 416 KVDRTPLHMAAADGHAHIVELLVRNGADVNAKDMLKMTALHWATEHHHRDVVELLIKYGA 595
T LH+AA H I++LL+ V+ K+ TALH A +H+ VV++L++ GA
Sbjct: 172 NAGDTCLHVAARYNHLSIIKLLLSAFCSVHEKNQAGDTALHIAAALNHKKVVKILLEAGA 231
Query: 596 DVHAFSKFDKSAFDIALEKNNAEILVILQEAMQ 694
D + ++ + A NN E+ ++L +A Q
Sbjct: 232 DGTIVNNAGRTPLETARYHNNPEVALLLTKAPQ 264
Score = 69.3 bits (168), Expect = 5e-12
Identities = 41/144 (28%), Positives = 74/144 (51%), Gaps = 1/144 (0%)
Frame = +2
Query: 260 GQDDEVRTLMANGAPFTT-DWLGTSPLHLAAQYGHYSTAEVLLRAGVSRDARTKVDRTPL 436
G + + L+ G D G + LH A+ +G +A++L++AG + A+ K T L
Sbjct: 86 GNTEVIAALIQEGCALDRQDKDGNTALHEASWHGFSQSAKLLVKAGANVLAKNKAGNTAL 145
Query: 437 HMAAADGHAHIVELLVRNGADVNAKDMLKMTALHWATEHHHRDVVELLIKYGADVHAFSK 616
H+A + HA +L+ G+ + K+ T LH A ++H +++LL+ VH ++
Sbjct: 146 HLACQNSHAQSTRVLLLGGSRADLKNNAGDTCLHVAARYNHLSIIKLLLSAFCSVHEKNQ 205
Query: 617 FDKSAFDIALEKNNAEILVILQEA 688
+A IA N+ +++ IL EA
Sbjct: 206 AGDTALHIAAALNHKKVVKILLEA 229
Score = 55.8 bits (133), Expect = 6e-08
Identities = 40/126 (31%), Positives = 64/126 (50%)
Frame = +2
Query: 335 LHLAAQYGHYSTAEVLLRAGVSRDARTKVDRTPLHMAAADGHAHIVELLVRNGADVNAKD 514
L +AA G L+ G ++ A TK RTPLH+AA GH +V++L++ G D++ +D
Sbjct: 14 LLIAAYKGQTENVVQLINKG-AKVAVTKHGRTPLHLAANKGHLSVVQILLKAGCDLDVQD 72
Query: 515 MLKMTALHWATEHHHRDVVELLIKYGADVHAFSKFDKSAFDIALEKNNAEILVILQEAMQ 694
TALH AT + +V+ LI+ G + K +A A ++ +L +A
Sbjct: 73 DGDQTALHRATVVGNTEVIAALIQEGCALDRQDKDGNTALHEASWHGFSQSAKLLVKAGA 132
Query: 695 NQVNAN 712
N + N
Sbjct: 133 NVLAKN 138
>ref|XP_002690227.1| PREDICTED: ankyrin repeat domain 6 [Bos taurus].
Length = 724
Score = 95.5 bits (236), Expect = 7e-20
Identities = 55/151 (36%), Positives = 84/151 (55%)
Frame = +2
Query: 227 LGKRLLEAARKGQDDEVRTLMANGAPFTTDWLGTSPLHLAAQYGHYSTAEVLLRAGVSRD 406
L +RLL AA KGQ + V L+ GA G +PLHLAA GH S ++LL+AG D
Sbjct: 10 LSERLLIAAYKGQTENVVQLINKGAKVAVTKHGRTPLHLAANKGHLSVVQILLKAGCDLD 69
Query: 407 ARTKVDRTPLHMAAADGHAHIVELLVRNGADVNAKDMLKMTALHWATEHHHRDVVELLIK 586
+ D+T LH A G+ ++ L++ G ++ +D TALH A+ H +LL+K
Sbjct: 70 VQDDGDQTALHRATVVGNTEVIAALIQEGCALDRQDKDGNTALHEASWHGFSQSAKLLVK 129
Query: 587 YGADVHAFSKFDKSAFDIALEKNNAEILVIL 679
GA+V A +K +A +A + ++A+ +L
Sbjct: 130 AGANVLAKNKAGNTALHLACQNSHAQSTRVL 160
Score = 74.7 bits (182), Expect = 1e-13
Identities = 49/153 (32%), Positives = 76/153 (49%), Gaps = 1/153 (0%)
Frame = +2
Query: 239 LLEAARKGQDDEVRTLMANGAP-FTTDWLGTSPLHLAAQYGHYSTAEVLLRAGVSRDART 415
L EA+ G + L+ GA + G + LHLA Q H + VLL G D +
Sbjct: 112 LHEASWHGFSQSAKLLVKAGANVLAKNKAGNTALHLACQNSHAQSTRVLLLGGSRADLKN 171
Query: 416 KVDRTPLHMAAADGHAHIVELLVRNGADVNAKDMLKMTALHWATEHHHRDVVELLIKYGA 595
T LH+AA H I++LL+ V+ K+ TALH A +H+ VV++L++ GA
Sbjct: 172 NAGDTCLHVAARYNHLSIIKLLLSAFCSVHEKNQAGDTALHIAAALNHKKVVKILLEAGA 231
Query: 596 DVHAFSKFDKSAFDIALEKNNAEILVILQEAMQ 694
D + ++ + A NN E+ ++L +A Q
Sbjct: 232 DGTIVNNAGRTPLETARYHNNPEVALLLTKAPQ 264
Score = 69.3 bits (168), Expect = 5e-12
Identities = 41/144 (28%), Positives = 74/144 (51%), Gaps = 1/144 (0%)
Frame = +2
Query: 260 GQDDEVRTLMANGAPFTT-DWLGTSPLHLAAQYGHYSTAEVLLRAGVSRDARTKVDRTPL 436
G + + L+ G D G + LH A+ +G +A++L++AG + A+ K T L
Sbjct: 86 GNTEVIAALIQEGCALDRQDKDGNTALHEASWHGFSQSAKLLVKAGANVLAKNKAGNTAL 145
Query: 437 HMAAADGHAHIVELLVRNGADVNAKDMLKMTALHWATEHHHRDVVELLIKYGADVHAFSK 616
H+A + HA +L+ G+ + K+ T LH A ++H +++LL+ VH ++
Sbjct: 146 HLACQNSHAQSTRVLLLGGSRADLKNNAGDTCLHVAARYNHLSIIKLLLSAFCSVHEKNQ 205
Query: 617 FDKSAFDIALEKNNAEILVILQEA 688
+A IA N+ +++ IL EA
Sbjct: 206 AGDTALHIAAALNHKKVVKILLEA 229
Score = 55.8 bits (133), Expect = 6e-08
Identities = 40/126 (31%), Positives = 64/126 (50%)
Frame = +2
Query: 335 LHLAAQYGHYSTAEVLLRAGVSRDARTKVDRTPLHMAAADGHAHIVELLVRNGADVNAKD 514
L +AA G L+ G ++ A TK RTPLH+AA GH +V++L++ G D++ +D
Sbjct: 14 LLIAAYKGQTENVVQLINKG-AKVAVTKHGRTPLHLAANKGHLSVVQILLKAGCDLDVQD 72
Query: 515 MLKMTALHWATEHHHRDVVELLIKYGADVHAFSKFDKSAFDIALEKNNAEILVILQEAMQ 694
TALH AT + +V+ LI+ G + K +A A ++ +L +A
Sbjct: 73 DGDQTALHRATVVGNTEVIAALIQEGCALDRQDKDGNTALHEASWHGFSQSAKLLVKAGA 132
Query: 695 NQVNAN 712
N + N
Sbjct: 133 NVLAKN 138
>ref|XP_002698771.1| PREDICTED: ankyrin 1, erythrocytic [Bos taurus].
Length = 1964
Score = 90.9 bits (224), Expect = 2e-18
Identities = 60/164 (36%), Positives = 83/164 (50%), Gaps = 1/164 (0%)
Frame = +2
Query: 248 AARKGQDDEVRTLMANGA-PFTTDWLGTSPLHLAAQYGHYSTAEVLLRAGVSRDARTKVD 424
AAR G + V+ L+ N A P G +PLH+AA+ GH TA LL S+ TK
Sbjct: 477 AARIGHTNMVKLLLENNANPNLATTAGHTPLHIAAREGHVETALALLEKEASQTCMTKKG 536
Query: 425 RTPLHMAAADGHAHIVELLVRNGADVNAKDMLKMTALHWATEHHHRDVVELLIKYGADVH 604
TPLH+AA G + ELL+ + A NA +T LH A H+H DVV LL+ G H
Sbjct: 537 FTPLHVAAKYGKVRMAELLLEHDAHPNAAGKSGLTPLHVAVHHNHLDVVRLLLPRGGSPH 596
Query: 605 AFSKFDKSAFDIALEKNNAEILVILQEAMQNQVNANPERANSVT 736
+ + + IA ++N E + + +Q +AN E VT
Sbjct: 597 SPALNGYTPLHIAAKQNQLE---VARSLLQYGGSANAESVQGVT 637
Score = 89.7 bits (221), Expect = 4e-18
Identities = 52/133 (39%), Positives = 80/133 (60%), Gaps = 1/133 (0%)
Frame = +2
Query: 248 AARKGQDDEVRTLMANGAPFTT-DWLGTSPLHLAAQYGHYSTAEVLLRAGVSRDARTKVD 424
AA++G + V L++ A + G +PLHL AQ GH A+VL++ GV+ DA T++
Sbjct: 642 AAQEGHAEMVALLLSKQANGNLGNKSGLTPLHLVAQEGHIPVADVLIKHGVTVDATTRMG 701
Query: 425 RTPLHMAAADGHAHIVELLVRNGADVNAKDMLKMTALHWATEHHHRDVVELLIKYGADVH 604
TPLH+A+ G+ +V+ L+++ ADVNAK L + LH A + H D+V LL+K+GA +
Sbjct: 702 YTPLHVASHYGNIKLVKFLLQHKADVNAKTKLGYSPLHQAAQQGHTDIVTLLLKHGASPN 761
Query: 605 AFSKFDKSAFDIA 643
S + IA
Sbjct: 762 EVSSNGTTPLAIA 774
Score = 84.3 bits (207), Expect = 2e-16
Identities = 49/158 (31%), Positives = 90/158 (56%), Gaps = 3/158 (1%)
Frame = +2
Query: 248 AARKGQDDEVRTLMANGAPFTTDWL-GTSPLHLAAQYGHYSTAEVLLRAGVSRDARTKVD 424
AA++ Q + R+L+ G + + G +PLHLAAQ GH +LL + + K
Sbjct: 609 AAKQNQLEVARSLLQYGGSANAESVQGVTPLHLAAQEGHAEMVALLLSKQANGNLGNKSG 668
Query: 425 RTPLHMAAADGHAHIVELLVRNGADVNAKDMLKMTALHWATEHHHRDVVELLIKYGADVH 604
TPLH+ A +GH + ++L+++G V+A + T LH A+ + + +V+ L+++ ADV+
Sbjct: 669 LTPLHLVAQEGHIPVADVLIKHGVTVDATTRMGYTPLHVASHYGNIKLVKFLLQHKADVN 728
Query: 605 AFSKFDKSAFDIALEKNNAEILVILQE--AMQNQVNAN 712
A +K S A ++ + +I+ +L + A N+V++N
Sbjct: 729 AKTKLGYSPLHQAAQQGHTDIVTLLLKHGASPNEVSSN 766
Score = 77.0 bits (188), Expect = 2e-14
Identities = 53/162 (32%), Positives = 82/162 (50%), Gaps = 1/162 (0%)
Frame = +2
Query: 248 AARKGQDDEVRTLMANGA-PFTTDWLGTSPLHLAAQYGHYSTAEVLLRAGVSRDARTKVD 424
AA G + L+ GA P + G +PLH+A + H E+LL+ G S DA T+
Sbjct: 345 AAHCGHHRVAKVLLDKGAKPNSRALNGFTPLHIACKKNHIRVMELLLKMGASIDAVTESG 404
Query: 425 RTPLHMAAADGHAHIVELLVRNGADVNAKDMLKMTALHWATEHHHRDVVELLIKYGADVH 604
TPLH+A+ GH IV+ L++ A N ++ T LH A H +V + L++ A V+
Sbjct: 405 LTPLHVASFMGHLPIVKSLLQREASPNVSNVKVETPLHMAARAGHTEVAKYLLQNKAKVN 464
Query: 605 AFSKFDKSAFDIALEKNNAEILVILQEAMQNQVNANPERANS 730
A +K D++ A + ++ +L E NANP A +
Sbjct: 465 AKAKDDQTPLHCAARIGHTNMVKLLLEN-----NANPNLATT 501
Score = 77.0 bits (188), Expect = 2e-14
Identities = 48/149 (32%), Positives = 79/149 (53%), Gaps = 1/149 (0%)
Frame = +2
Query: 269 DEVRTLMANG-APFTTDWLGTSPLHLAAQYGHYSTAEVLLRAGVSRDARTKVDRTPLHMA 445
D VR L+ G +P + G +PLH+AA+ A LL+ G S +A + TPLH+A
Sbjct: 583 DVVRLLLPRGGSPHSPALNGYTPLHIAAKQNQLEVARSLLQYGGSANAESVQGVTPLHLA 642
Query: 446 AADGHAHIVELLVRNGADVNAKDMLKMTALHWATEHHHRDVVELLIKYGADVHAFSKFDK 625
A +GHA +V LL+ A+ N + +T LH + H V ++LIK+G V A ++
Sbjct: 643 AQEGHAEMVALLLSKQANGNLGNKSGLTPLHLVAQEGHIPVADVLIKHGVTVDATTRMGY 702
Query: 626 SAFDIALEKNNAEILVILQEAMQNQVNAN 712
+ +A N +++ L +Q++ + N
Sbjct: 703 TPLHVASHYGNIKLVKFL---LQHKADVN 728
Score = 75.5 bits (184), Expect = 7e-14
Identities = 47/153 (30%), Positives = 77/153 (50%), Gaps = 1/153 (0%)
Frame = +2
Query: 224 DLGKRLLEAARKGQDDEVRTLMANGAPFTT-DWLGTSPLHLAAQYGHYSTAEVLLRAGVS 400
D L AAR G D+ + NG T + G + LHLA++ GH LL +
Sbjct: 11 DAATSFLRAARSGNLDKALDHLRNGVDINTCNQNGLNGLHLASKEGHVKMVVELLHKEII 70
Query: 401 RDARTKVDRTPLHMAAADGHAHIVELLVRNGADVNAKDMLKMTALHWATEHHHRDVVELL 580
+ TK T LH+AA G +V LV GA+VNA+ T L+ A + +H +VV+ L
Sbjct: 71 LETTTKKGNTALHIAALAGQDEVVRELVNYGANVNAQSQKGFTPLYMAAQENHLEVVKFL 130
Query: 581 IKYGADVHAFSKFDKSAFDIALEKNNAEILVIL 679
++ GA+ + ++ + +AL++ + ++ L
Sbjct: 131 LENGANQNVATEDGFTPLAVALQQGHENVVAHL 163
Score = 75.5 bits (184), Expect = 7e-14
Identities = 36/93 (38%), Positives = 57/93 (61%)
Frame = +2
Query: 323 GTSPLHLAAQYGHYSTAEVLLRAGVSRDARTKVDRTPLHMAAADGHAHIVELLVRNGADV 502
G +PLH+A++ G+ +LL G + RTK + TPLH AA +GH I E+L+ +GA +
Sbjct: 239 GITPLHIASRRGNVIMVRLLLDRGAQIETRTKDELTPLHCAARNGHLRISEILLDHGAPI 298
Query: 503 NAKDMLKMTALHWATEHHHRDVVELLIKYGADV 601
AK ++ +H A + H D V LL++Y A++
Sbjct: 299 QAKTKNGLSPIHMAAQGDHLDCVRLLLQYNAEI 331
Score = 75.5 bits (184), Expect = 7e-14
Identities = 53/168 (31%), Positives = 85/168 (50%), Gaps = 1/168 (0%)
Frame = +2
Query: 248 AARKGQDDEVRTLMANGAPFTTDWL-GTSPLHLAAQYGHYSTAEVLLRAGVSRDARTKVD 424
AAR G L+ +GAP G SP+H+AAQ H +LL+ D T
Sbjct: 279 AARNGHLRISEILLDHGAPIQAKTKNGLSPIHMAAQGDHLDCVRLLLQYNAEIDDITLDH 338
Query: 425 RTPLHMAAADGHAHIVELLVRNGADVNAKDMLKMTALHWATEHHHRDVVELLIKYGADVH 604
TPLH+AA GH + ++L+ GA N++ + T LH A + +H V+ELL+K GA +
Sbjct: 339 LTPLHVAAHCGHHRVAKVLLDKGAKPNSRALNGFTPLHIACKKNHIRVMELLLKMGASID 398
Query: 605 AFSKFDKSAFDIALEKNNAEILVILQEAMQNQVNANPERANSVTMATP 748
A ++ + +A + L I++ +Q + + N ++V + TP
Sbjct: 399 AVTESGLTPLHVASFMGH---LPIVKSLLQREASPN---VSNVKVETP 440
Score = 72.8 bits (177), Expect = 5e-13
Identities = 47/145 (32%), Positives = 76/145 (52%), Gaps = 1/145 (0%)
Frame = +2
Query: 248 AARKGQDDEVRTLMANGAPFTTDWLGT-SPLHLAAQYGHYSTAEVLLRAGVSRDARTKVD 424
A+R+G VR L+ GA T +PLH AA+ GH +E+LL G A+TK
Sbjct: 246 ASRRGNVIMVRLLLDRGAQIETRTKDELTPLHCAARNGHLRISEILLDHGAPIQAKTKNG 305
Query: 425 RTPLHMAAADGHAHIVELLVRNGADVNAKDMLKMTALHWATEHHHRDVVELLIKYGADVH 604
+P+HMAA H V LL++ A+++ + +T LH A H V ++L+ GA +
Sbjct: 306 LSPIHMAAQGDHLDCVRLLLQYNAEIDDITLDHLTPLHVAAHCGHHRVAKVLLDKGAKPN 365
Query: 605 AFSKFDKSAFDIALEKNNAEILVIL 679
+ + + IA +KN+ ++ +L
Sbjct: 366 SRALNGFTPLHIACKKNHIRVMELL 390
Score = 72.8 bits (177), Expect = 5e-13
Identities = 49/164 (29%), Positives = 80/164 (48%), Gaps = 1/164 (0%)
Frame = +2
Query: 248 AARKGQDDEVRTLMANGAPFTT-DWLGTSPLHLAAQYGHYSTAEVLLRAGVSRDARTKVD 424
AAR+G + L+ A T G +PLH+AA+YG AE+LL +A K
Sbjct: 510 AAREGHVETALALLEKEASQTCMTKKGFTPLHVAAKYGKVRMAELLLEHDAHPNAAGKSG 569
Query: 425 RTPLHMAAADGHAHIVELLVRNGADVNAKDMLKMTALHWATEHHHRDVVELLIKYGADVH 604
TPLH+A H +V LL+ G ++ + T LH A + + +V L++YG +
Sbjct: 570 LTPLHVAVHHNHLDVVRLLLPRGGSPHSPALNGYTPLHIAAKQNQLEVARSLLQYGGSAN 629
Query: 605 AFSKFDKSAFDIALEKNNAEILVILQEAMQNQVNANPERANSVT 736
A S + +A ++ +AE++ +L + Q N N + +T
Sbjct: 630 AESVQGVTPLHLAAQEGHAEMVALL---LSKQANGNLGNKSGLT 670
Score = 70.5 bits (171), Expect = 2e-12
Identities = 42/143 (29%), Positives = 77/143 (53%), Gaps = 4/143 (2%)
Frame = +2
Query: 263 QDDEVRT----LMANGAPFTTDWLGTSPLHLAAQYGHYSTAEVLLRAGVSRDARTKVDRT 430
++D+ RT L + P G +PLH+AA Y + + A++LL G S + + T
Sbjct: 182 RNDDTRTAAVLLQNDPNPDVLSKTGFTPLHIAAHYENLNVAQLLLNRGASVNFTPQNGIT 241
Query: 431 PLHMAAADGHAHIVELLVRNGADVNAKDMLKMTALHWATEHHHRDVVELLIKYGADVHAF 610
PLH+A+ G+ +V LL+ GA + + ++T LH A + H + E+L+ +GA + A
Sbjct: 242 PLHIASRRGNVIMVRLLLDRGAQIETRTKDELTPLHCAARNGHLRISEILLDHGAPIQAK 301
Query: 611 SKFDKSAFDIALEKNNAEILVIL 679
+K S +A + ++ + + +L
Sbjct: 302 TKNGLSPIHMAAQGDHLDCVRLL 324
Score = 68.6 bits (166), Expect = 9e-12
Identities = 41/126 (32%), Positives = 64/126 (50%)
Frame = +2
Query: 323 GTSPLHLAAQYGHYSTAEVLLRAGVSRDARTKVDRTPLHMAAADGHAHIVELLVRNGADV 502
G +PLH+A+ GH + LL+ S + TPLHMAA GH + + L++N A V
Sbjct: 404 GLTPLHVASFMGHLPIVKSLLQREASPNVSNVKVETPLHMAARAGHTEVAKYLLQNKAKV 463
Query: 503 NAKDMLKMTALHWATEHHHRDVVELLIKYGADVHAFSKFDKSAFDIALEKNNAEILVILQ 682
NAK T LH A H ++V+LL++ A+ + + + IA + + E + L
Sbjct: 464 NAKAKDDQTPLHCAARIGHTNMVKLLLENNANPNLATTAGHTPLHIAAREGHVETALALL 523
Query: 683 EAMQNQ 700
E +Q
Sbjct: 524 EKEASQ 529
Score = 67.4 bits (163), Expect = 2e-11
Identities = 50/166 (30%), Positives = 82/166 (49%), Gaps = 3/166 (1%)
Frame = +2
Query: 248 AARKGQDDEVRTLMANGAPF---TTDWLGTSPLHLAAQYGHYSTAEVLLRAGVSRDARTK 418
AA+ D VR L+ A T D L +PLH+AA GH+ A+VLL G ++R
Sbjct: 312 AAQGDHLDCVRLLLQYNAEIDDITLDHL--TPLHVAAHCGHHRVAKVLLDKGAKPNSRAL 369
Query: 419 VDRTPLHMAAADGHAHIVELLVRNGADVNAKDMLKMTALHWATEHHHRDVVELLIKYGAD 598
TPLH+A H ++ELL++ GA ++A +T LH A+ H +V+ L++ A
Sbjct: 370 NGFTPLHIACKKNHIRVMELLLKMGASIDAVTESGLTPLHVASFMGHLPIVKSLLQREAS 429
Query: 599 VHAFSKFDKSAFDIALEKNNAEILVILQEAMQNQVNANPERANSVT 736
+ + ++ +A + E+ L +QN+ N + + T
Sbjct: 430 PNVSNVKVETPLHMAARAGHTEVAKYL---LQNKAKVNAKAKDDQT 472
Score = 65.5 bits (158), Expect = 7e-11
Identities = 40/134 (29%), Positives = 65/134 (48%)
Frame = +2
Query: 284 LMANGAPFTTDWLGTSPLHLAAQYGHYSTAEVLLRAGVSRDARTKVDRTPLHMAAADGHA 463
L +P ++ +PLH+AA+ GH A+ LL+ +A+ K D+TPLH AA GH
Sbjct: 424 LQREASPNVSNVKVETPLHMAARAGHTEVAKYLLQNKAKVNAKAKDDQTPLHCAARIGHT 483
Query: 464 HIVELLVRNGADVNAKDMLKMTALHWATEHHHRDVVELLIKYGADVHAFSKFDKSAFDIA 643
++V+LL+ N A+ N T LH A H + L++ A +K + +A
Sbjct: 484 NMVKLLLENNANPNLATTAGHTPLHIAAREGHVETALALLEKEASQTCMTKKGFTPLHVA 543
Query: 644 LEKNNAEILVILQE 685
+ + +L E
Sbjct: 544 AKYGKVRMAELLLE 557
Score = 62.0 bits (149), Expect = 8e-10
Identities = 48/162 (29%), Positives = 74/162 (45%)
Frame = +2
Query: 308 TTDWLGTSPLHLAAQYGHYSTAEVLLRAGVSRDARTKVDRTPLHMAAADGHAHIVELLVR 487
TT G + LH+AA G L+ G + +A+++ TPL+MAA + H +V+ L+
Sbjct: 73 TTTKKGNTALHIAALAGQDEVVRELVNYGANVNAQSQKGFTPLYMAAQENHLEVVKFLLE 132
Query: 488 NGADVNAKDMLKMTALHWATEHHHRDVVELLIKYGADVHAFSKFDKSAFDIALEKNNAEI 667
NGA+ N T L A + H +VV LI YG K A IA ++
Sbjct: 133 NGANQNVATEDGFTPLAVALQQGHENVVAHLINYGTK----GKVRLPALHIAARNDDTRT 188
Query: 668 LVILQEAMQNQVNANPERANSVTMATPFIFTSGEVVNLASLV 793
+L +QN + NP+ + I E +N+A L+
Sbjct: 189 AAVL---LQN--DPNPDVLSKTGFTPLHIAAHYENLNVAQLL 225
Score = 57.8 bits (138), Expect = 2e-08
Identities = 44/147 (29%), Positives = 71/147 (48%)
Frame = +2
Query: 239 LLEAARKGQDDEVRTLMANGAPFTTDWLGTSPLHLAAQYGHYSTAEVLLRAGVSRDARTK 418
L A ++G ++ V L+ G T + LH+AA+ TA VLL+ + D +K
Sbjct: 148 LAVALQQGHENVVAHLINYG---TKGKVRLPALHIAARNDDTRTAAVLLQNDPNPDVLSK 204
Query: 419 VDRTPLHMAAADGHAHIVELLVRNGADVNAKDMLKMTALHWATEHHHRDVVELLIKYGAD 598
TPLH+AA + ++ +LL+ GA VN +T LH A+ + +V LL+ GA
Sbjct: 205 TGFTPLHIAAHYENLNVAQLLLNRGASVNFTPQNGITPLHIASRRGNVIMVRLLLDRGAQ 264
Query: 599 VHAFSKFDKSAFDIALEKNNAEILVIL 679
+ +K + + A + I IL
Sbjct: 265 IETRTKDELTPLHCAARNGHLRISEIL 291
Score = 57.4 bits (137), Expect = 2e-08
Identities = 36/111 (32%), Positives = 57/111 (51%), Gaps = 1/111 (0%)
Frame = +2
Query: 251 ARKGQDDEVRTLMANGAPF-TTDWLGTSPLHLAAQYGHYSTAEVLLRAGVSRDARTKVDR 427
A++G L+ +G T +G +PLH+A+ YG+ + LL+ +A+TK+
Sbjct: 676 AQEGHIPVADVLIKHGVTVDATTRMGYTPLHVASHYGNIKLVKFLLQHKADVNAKTKLGY 735
Query: 428 TPLHMAAADGHAHIVELLVRNGADVNAKDMLKMTALHWATEHHHRDVVELL 580
+PLH AA GH IV LL+++GA N T L A + V ++L
Sbjct: 736 SPLHQAAQQGHTDIVTLLLKHGASPNEVSSNGTTPLAIAKRLGYISVTDVL 786
Score = 48.5 bits (114), Expect = 9e-06
Identities = 36/119 (30%), Positives = 58/119 (48%)
Frame = +2
Query: 344 AAQYGHYSTAEVLLRAGVSRDARTKVDRTPLHMAAADGHAHIVELLVRNGADVNAKDMLK 523
AA+ G+ A LR GV + + LH+A+ +GH +V L+ +
Sbjct: 19 AARSGNLDKALDHLRNGVDINTCNQNGLNGLHLASKEGHVKMVVELLHKEIILETTTKKG 78
Query: 524 MTALHWATEHHHRDVVELLIKYGADVHAFSKFDKSAFDIALEKNNAEILVILQEAMQNQ 700
TALH A +VV L+ YGA+V+A S+ + +A ++N+ E++ L E NQ
Sbjct: 79 NTALHIAALAGQDEVVRELVNYGANVNAQSQKGFTPLYMAAQENHLEVVKFLLENGANQ 137
>ref|XP_002703365.1| PREDICTED: ankyrin 1, erythrocytic [Bos taurus].
Length = 1963
Score = 90.9 bits (224), Expect = 2e-18
Identities = 60/164 (36%), Positives = 83/164 (50%), Gaps = 1/164 (0%)
Frame = +2
Query: 248 AARKGQDDEVRTLMANGA-PFTTDWLGTSPLHLAAQYGHYSTAEVLLRAGVSRDARTKVD 424
AAR G + V+ L+ N A P G +PLH+AA+ GH TA LL S+ TK
Sbjct: 476 AARIGHTNMVKLLLENNANPNLATTAGHTPLHIAAREGHVETALALLEKEASQTCMTKKG 535
Query: 425 RTPLHMAAADGHAHIVELLVRNGADVNAKDMLKMTALHWATEHHHRDVVELLIKYGADVH 604
TPLH+AA G + ELL+ + A NA +T LH A H+H DVV LL+ G H
Sbjct: 536 FTPLHVAAKYGKVRMAELLLEHDAHPNAAGKSGLTPLHVAVHHNHLDVVRLLLPRGGSPH 595
Query: 605 AFSKFDKSAFDIALEKNNAEILVILQEAMQNQVNANPERANSVT 736
+ + + IA ++N E + + +Q +AN E VT
Sbjct: 596 SPALNGYTPLHIAAKQNQLE---VARSLLQYGGSANAESVQGVT 636
Score = 89.7 bits (221), Expect = 4e-18
Identities = 52/133 (39%), Positives = 80/133 (60%), Gaps = 1/133 (0%)
Frame = +2
Query: 248 AARKGQDDEVRTLMANGAPFTT-DWLGTSPLHLAAQYGHYSTAEVLLRAGVSRDARTKVD 424
AA++G + V L++ A + G +PLHL AQ GH A+VL++ GV+ DA T++
Sbjct: 641 AAQEGHAEMVALLLSKQANGNLGNKSGLTPLHLVAQEGHIPVADVLIKHGVTVDATTRMG 700
Query: 425 RTPLHMAAADGHAHIVELLVRNGADVNAKDMLKMTALHWATEHHHRDVVELLIKYGADVH 604
TPLH+A+ G+ +V+ L+++ ADVNAK L + LH A + H D+V LL+K+GA +
Sbjct: 701 YTPLHVASHYGNIKLVKFLLQHKADVNAKTKLGYSPLHQAAQQGHTDIVTLLLKHGASPN 760
Query: 605 AFSKFDKSAFDIA 643
S + IA
Sbjct: 761 EVSSNGTTPLAIA 773
Score = 84.3 bits (207), Expect = 2e-16
Identities = 49/158 (31%), Positives = 90/158 (56%), Gaps = 3/158 (1%)
Frame = +2
Query: 248 AARKGQDDEVRTLMANGAPFTTDWL-GTSPLHLAAQYGHYSTAEVLLRAGVSRDARTKVD 424
AA++ Q + R+L+ G + + G +PLHLAAQ GH +LL + + K
Sbjct: 608 AAKQNQLEVARSLLQYGGSANAESVQGVTPLHLAAQEGHAEMVALLLSKQANGNLGNKSG 667
Query: 425 RTPLHMAAADGHAHIVELLVRNGADVNAKDMLKMTALHWATEHHHRDVVELLIKYGADVH 604
TPLH+ A +GH + ++L+++G V+A + T LH A+ + + +V+ L+++ ADV+
Sbjct: 668 LTPLHLVAQEGHIPVADVLIKHGVTVDATTRMGYTPLHVASHYGNIKLVKFLLQHKADVN 727
Query: 605 AFSKFDKSAFDIALEKNNAEILVILQE--AMQNQVNAN 712
A +K S A ++ + +I+ +L + A N+V++N
Sbjct: 728 AKTKLGYSPLHQAAQQGHTDIVTLLLKHGASPNEVSSN 765
Score = 77.0 bits (188), Expect = 2e-14
Identities = 53/162 (32%), Positives = 82/162 (50%), Gaps = 1/162 (0%)
Frame = +2
Query: 248 AARKGQDDEVRTLMANGA-PFTTDWLGTSPLHLAAQYGHYSTAEVLLRAGVSRDARTKVD 424
AA G + L+ GA P + G +PLH+A + H E+LL+ G S DA T+
Sbjct: 344 AAHCGHHRVAKVLLDKGAKPNSRALNGFTPLHIACKKNHIRVMELLLKMGASIDAVTESG 403
Query: 425 RTPLHMAAADGHAHIVELLVRNGADVNAKDMLKMTALHWATEHHHRDVVELLIKYGADVH 604
TPLH+A+ GH IV+ L++ A N ++ T LH A H +V + L++ A V+
Sbjct: 404 LTPLHVASFMGHLPIVKSLLQREASPNVSNVKVETPLHMAARAGHTEVAKYLLQNKAKVN 463
Query: 605 AFSKFDKSAFDIALEKNNAEILVILQEAMQNQVNANPERANS 730
A +K D++ A + ++ +L E NANP A +
Sbjct: 464 AKAKDDQTPLHCAARIGHTNMVKLLLEN-----NANPNLATT 500
Score = 77.0 bits (188), Expect = 2e-14
Identities = 48/149 (32%), Positives = 79/149 (53%), Gaps = 1/149 (0%)
Frame = +2
Query: 269 DEVRTLMANG-APFTTDWLGTSPLHLAAQYGHYSTAEVLLRAGVSRDARTKVDRTPLHMA 445
D VR L+ G +P + G +PLH+AA+ A LL+ G S +A + TPLH+A
Sbjct: 582 DVVRLLLPRGGSPHSPALNGYTPLHIAAKQNQLEVARSLLQYGGSANAESVQGVTPLHLA 641
Query: 446 AADGHAHIVELLVRNGADVNAKDMLKMTALHWATEHHHRDVVELLIKYGADVHAFSKFDK 625
A +GHA +V LL+ A+ N + +T LH + H V ++LIK+G V A ++
Sbjct: 642 AQEGHAEMVALLLSKQANGNLGNKSGLTPLHLVAQEGHIPVADVLIKHGVTVDATTRMGY 701
Query: 626 SAFDIALEKNNAEILVILQEAMQNQVNAN 712
+ +A N +++ L +Q++ + N
Sbjct: 702 TPLHVASHYGNIKLVKFL---LQHKADVN 727
Score = 75.5 bits (184), Expect = 7e-14
Identities = 47/153 (30%), Positives = 77/153 (50%), Gaps = 1/153 (0%)
Frame = +2
Query: 224 DLGKRLLEAARKGQDDEVRTLMANGAPFTT-DWLGTSPLHLAAQYGHYSTAEVLLRAGVS 400
D L AAR G D+ + NG T + G + LHLA++ GH LL +
Sbjct: 10 DAATSFLRAARSGNLDKALDHLRNGVDINTCNQNGLNGLHLASKEGHVKMVVELLHKEII 69
Query: 401 RDARTKVDRTPLHMAAADGHAHIVELLVRNGADVNAKDMLKMTALHWATEHHHRDVVELL 580
+ TK T LH+AA G +V LV GA+VNA+ T L+ A + +H +VV+ L
Sbjct: 70 LETTTKKGNTALHIAALAGQDEVVRELVNYGANVNAQSQKGFTPLYMAAQENHLEVVKFL 129
Query: 581 IKYGADVHAFSKFDKSAFDIALEKNNAEILVIL 679
++ GA+ + ++ + +AL++ + ++ L
Sbjct: 130 LENGANQNVATEDGFTPLAVALQQGHENVVAHL 162
Score = 75.5 bits (184), Expect = 7e-14
Identities = 36/93 (38%), Positives = 57/93 (61%)
Frame = +2
Query: 323 GTSPLHLAAQYGHYSTAEVLLRAGVSRDARTKVDRTPLHMAAADGHAHIVELLVRNGADV 502
G +PLH+A++ G+ +LL G + RTK + TPLH AA +GH I E+L+ +GA +
Sbjct: 238 GITPLHIASRRGNVIMVRLLLDRGAQIETRTKDELTPLHCAARNGHLRISEILLDHGAPI 297
Query: 503 NAKDMLKMTALHWATEHHHRDVVELLIKYGADV 601
AK ++ +H A + H D V LL++Y A++
Sbjct: 298 QAKTKNGLSPIHMAAQGDHLDCVRLLLQYNAEI 330
Score = 75.5 bits (184), Expect = 7e-14
Identities = 53/168 (31%), Positives = 85/168 (50%), Gaps = 1/168 (0%)
Frame = +2
Query: 248 AARKGQDDEVRTLMANGAPFTTDWL-GTSPLHLAAQYGHYSTAEVLLRAGVSRDARTKVD 424
AAR G L+ +GAP G SP+H+AAQ H +LL+ D T
Sbjct: 278 AARNGHLRISEILLDHGAPIQAKTKNGLSPIHMAAQGDHLDCVRLLLQYNAEIDDITLDH 337
Query: 425 RTPLHMAAADGHAHIVELLVRNGADVNAKDMLKMTALHWATEHHHRDVVELLIKYGADVH 604
TPLH+AA GH + ++L+ GA N++ + T LH A + +H V+ELL+K GA +
Sbjct: 338 LTPLHVAAHCGHHRVAKVLLDKGAKPNSRALNGFTPLHIACKKNHIRVMELLLKMGASID 397
Query: 605 AFSKFDKSAFDIALEKNNAEILVILQEAMQNQVNANPERANSVTMATP 748
A ++ + +A + L I++ +Q + + N ++V + TP
Sbjct: 398 AVTESGLTPLHVASFMGH---LPIVKSLLQREASPN---VSNVKVETP 439
Score = 72.8 bits (177), Expect = 5e-13
Identities = 47/145 (32%), Positives = 76/145 (52%), Gaps = 1/145 (0%)
Frame = +2
Query: 248 AARKGQDDEVRTLMANGAPFTTDWLGT-SPLHLAAQYGHYSTAEVLLRAGVSRDARTKVD 424
A+R+G VR L+ GA T +PLH AA+ GH +E+LL G A+TK
Sbjct: 245 ASRRGNVIMVRLLLDRGAQIETRTKDELTPLHCAARNGHLRISEILLDHGAPIQAKTKNG 304
Query: 425 RTPLHMAAADGHAHIVELLVRNGADVNAKDMLKMTALHWATEHHHRDVVELLIKYGADVH 604
+P+HMAA H V LL++ A+++ + +T LH A H V ++L+ GA +
Sbjct: 305 LSPIHMAAQGDHLDCVRLLLQYNAEIDDITLDHLTPLHVAAHCGHHRVAKVLLDKGAKPN 364
Query: 605 AFSKFDKSAFDIALEKNNAEILVIL 679
+ + + IA +KN+ ++ +L
Sbjct: 365 SRALNGFTPLHIACKKNHIRVMELL 389
Score = 72.8 bits (177), Expect = 5e-13
Identities = 49/164 (29%), Positives = 80/164 (48%), Gaps = 1/164 (0%)
Frame = +2
Query: 248 AARKGQDDEVRTLMANGAPFTT-DWLGTSPLHLAAQYGHYSTAEVLLRAGVSRDARTKVD 424
AAR+G + L+ A T G +PLH+AA+YG AE+LL +A K
Sbjct: 509 AAREGHVETALALLEKEASQTCMTKKGFTPLHVAAKYGKVRMAELLLEHDAHPNAAGKSG 568
Query: 425 RTPLHMAAADGHAHIVELLVRNGADVNAKDMLKMTALHWATEHHHRDVVELLIKYGADVH 604
TPLH+A H +V LL+ G ++ + T LH A + + +V L++YG +
Sbjct: 569 LTPLHVAVHHNHLDVVRLLLPRGGSPHSPALNGYTPLHIAAKQNQLEVARSLLQYGGSAN 628
Query: 605 AFSKFDKSAFDIALEKNNAEILVILQEAMQNQVNANPERANSVT 736
A S + +A ++ +AE++ +L + Q N N + +T
Sbjct: 629 AESVQGVTPLHLAAQEGHAEMVALL---LSKQANGNLGNKSGLT 669
Score = 70.5 bits (171), Expect = 2e-12
Identities = 42/143 (29%), Positives = 77/143 (53%), Gaps = 4/143 (2%)
Frame = +2
Query: 263 QDDEVRT----LMANGAPFTTDWLGTSPLHLAAQYGHYSTAEVLLRAGVSRDARTKVDRT 430
++D+ RT L + P G +PLH+AA Y + + A++LL G S + + T
Sbjct: 181 RNDDTRTAAVLLQNDPNPDVLSKTGFTPLHIAAHYENLNVAQLLLNRGASVNFTPQNGIT 240
Query: 431 PLHMAAADGHAHIVELLVRNGADVNAKDMLKMTALHWATEHHHRDVVELLIKYGADVHAF 610
PLH+A+ G+ +V LL+ GA + + ++T LH A + H + E+L+ +GA + A
Sbjct: 241 PLHIASRRGNVIMVRLLLDRGAQIETRTKDELTPLHCAARNGHLRISEILLDHGAPIQAK 300
Query: 611 SKFDKSAFDIALEKNNAEILVIL 679
+K S +A + ++ + + +L
Sbjct: 301 TKNGLSPIHMAAQGDHLDCVRLL 323
Score = 68.6 bits (166), Expect = 9e-12
Identities = 41/126 (32%), Positives = 64/126 (50%)
Frame = +2
Query: 323 GTSPLHLAAQYGHYSTAEVLLRAGVSRDARTKVDRTPLHMAAADGHAHIVELLVRNGADV 502
G +PLH+A+ GH + LL+ S + TPLHMAA GH + + L++N A V
Sbjct: 403 GLTPLHVASFMGHLPIVKSLLQREASPNVSNVKVETPLHMAARAGHTEVAKYLLQNKAKV 462
Query: 503 NAKDMLKMTALHWATEHHHRDVVELLIKYGADVHAFSKFDKSAFDIALEKNNAEILVILQ 682
NAK T LH A H ++V+LL++ A+ + + + IA + + E + L
Sbjct: 463 NAKAKDDQTPLHCAARIGHTNMVKLLLENNANPNLATTAGHTPLHIAAREGHVETALALL 522
Query: 683 EAMQNQ 700
E +Q
Sbjct: 523 EKEASQ 528
Score = 67.4 bits (163), Expect = 2e-11
Identities = 50/166 (30%), Positives = 82/166 (49%), Gaps = 3/166 (1%)
Frame = +2
Query: 248 AARKGQDDEVRTLMANGAPF---TTDWLGTSPLHLAAQYGHYSTAEVLLRAGVSRDARTK 418
AA+ D VR L+ A T D L +PLH+AA GH+ A+VLL G ++R
Sbjct: 311 AAQGDHLDCVRLLLQYNAEIDDITLDHL--TPLHVAAHCGHHRVAKVLLDKGAKPNSRAL 368
Query: 419 VDRTPLHMAAADGHAHIVELLVRNGADVNAKDMLKMTALHWATEHHHRDVVELLIKYGAD 598
TPLH+A H ++ELL++ GA ++A +T LH A+ H +V+ L++ A
Sbjct: 369 NGFTPLHIACKKNHIRVMELLLKMGASIDAVTESGLTPLHVASFMGHLPIVKSLLQREAS 428
Query: 599 VHAFSKFDKSAFDIALEKNNAEILVILQEAMQNQVNANPERANSVT 736
+ + ++ +A + E+ L +QN+ N + + T
Sbjct: 429 PNVSNVKVETPLHMAARAGHTEVAKYL---LQNKAKVNAKAKDDQT 471
Score = 65.5 bits (158), Expect = 7e-11
Identities = 40/134 (29%), Positives = 65/134 (48%)
Frame = +2
Query: 284 LMANGAPFTTDWLGTSPLHLAAQYGHYSTAEVLLRAGVSRDARTKVDRTPLHMAAADGHA 463
L +P ++ +PLH+AA+ GH A+ LL+ +A+ K D+TPLH AA GH
Sbjct: 423 LQREASPNVSNVKVETPLHMAARAGHTEVAKYLLQNKAKVNAKAKDDQTPLHCAARIGHT 482
Query: 464 HIVELLVRNGADVNAKDMLKMTALHWATEHHHRDVVELLIKYGADVHAFSKFDKSAFDIA 643
++V+LL+ N A+ N T LH A H + L++ A +K + +A
Sbjct: 483 NMVKLLLENNANPNLATTAGHTPLHIAAREGHVETALALLEKEASQTCMTKKGFTPLHVA 542
Query: 644 LEKNNAEILVILQE 685
+ + +L E
Sbjct: 543 AKYGKVRMAELLLE 556
Score = 62.0 bits (149), Expect = 8e-10
Identities = 48/162 (29%), Positives = 74/162 (45%)
Frame = +2
Query: 308 TTDWLGTSPLHLAAQYGHYSTAEVLLRAGVSRDARTKVDRTPLHMAAADGHAHIVELLVR 487
TT G + LH+AA G L+ G + +A+++ TPL+MAA + H +V+ L+
Sbjct: 72 TTTKKGNTALHIAALAGQDEVVRELVNYGANVNAQSQKGFTPLYMAAQENHLEVVKFLLE 131
Query: 488 NGADVNAKDMLKMTALHWATEHHHRDVVELLIKYGADVHAFSKFDKSAFDIALEKNNAEI 667
NGA+ N T L A + H +VV LI YG K A IA ++
Sbjct: 132 NGANQNVATEDGFTPLAVALQQGHENVVAHLINYGTK----GKVRLPALHIAARNDDTRT 187
Query: 668 LVILQEAMQNQVNANPERANSVTMATPFIFTSGEVVNLASLV 793
+L +QN + NP+ + I E +N+A L+
Sbjct: 188 AAVL---LQN--DPNPDVLSKTGFTPLHIAAHYENLNVAQLL 224
Score = 57.8 bits (138), Expect = 2e-08
Identities = 44/147 (29%), Positives = 71/147 (48%)
Frame = +2
Query: 239 LLEAARKGQDDEVRTLMANGAPFTTDWLGTSPLHLAAQYGHYSTAEVLLRAGVSRDARTK 418
L A ++G ++ V L+ G T + LH+AA+ TA VLL+ + D +K
Sbjct: 147 LAVALQQGHENVVAHLINYG---TKGKVRLPALHIAARNDDTRTAAVLLQNDPNPDVLSK 203
Query: 419 VDRTPLHMAAADGHAHIVELLVRNGADVNAKDMLKMTALHWATEHHHRDVVELLIKYGAD 598
TPLH+AA + ++ +LL+ GA VN +T LH A+ + +V LL+ GA
Sbjct: 204 TGFTPLHIAAHYENLNVAQLLLNRGASVNFTPQNGITPLHIASRRGNVIMVRLLLDRGAQ 263
Query: 599 VHAFSKFDKSAFDIALEKNNAEILVIL 679
+ +K + + A + I IL
Sbjct: 264 IETRTKDELTPLHCAARNGHLRISEIL 290
Score = 57.4 bits (137), Expect = 2e-08
Identities = 36/111 (32%), Positives = 57/111 (51%), Gaps = 1/111 (0%)
Frame = +2
Query: 251 ARKGQDDEVRTLMANGAPF-TTDWLGTSPLHLAAQYGHYSTAEVLLRAGVSRDARTKVDR 427
A++G L+ +G T +G +PLH+A+ YG+ + LL+ +A+TK+
Sbjct: 675 AQEGHIPVADVLIKHGVTVDATTRMGYTPLHVASHYGNIKLVKFLLQHKADVNAKTKLGY 734
Query: 428 TPLHMAAADGHAHIVELLVRNGADVNAKDMLKMTALHWATEHHHRDVVELL 580
+PLH AA GH IV LL+++GA N T L A + V ++L
Sbjct: 735 SPLHQAAQQGHTDIVTLLLKHGASPNEVSSNGTTPLAIAKRLGYISVTDVL 785
Score = 48.5 bits (114), Expect = 9e-06
Identities = 36/119 (30%), Positives = 58/119 (48%)
Frame = +2
Query: 344 AAQYGHYSTAEVLLRAGVSRDARTKVDRTPLHMAAADGHAHIVELLVRNGADVNAKDMLK 523
AA+ G+ A LR GV + + LH+A+ +GH +V L+ +
Sbjct: 18 AARSGNLDKALDHLRNGVDINTCNQNGLNGLHLASKEGHVKMVVELLHKEIILETTTKKG 77
Query: 524 MTALHWATEHHHRDVVELLIKYGADVHAFSKFDKSAFDIALEKNNAEILVILQEAMQNQ 700
TALH A +VV L+ YGA+V+A S+ + +A ++N+ E++ L E NQ
Sbjct: 78 NTALHIAALAGQDEVVRELVNYGANVNAQSQKGFTPLYMAAQENHLEVVKFLLENGANQ 136
>ref|NP_001193089.1| tankyrase-1 [Bos taurus].
Length = 1327
Score = 88.2 bits (217), Expect = 1e-17
Identities = 52/137 (37%), Positives = 77/137 (56%), Gaps = 2/137 (1%)
Frame = +2
Query: 239 LLEAARKGQDDEVRTLMA--NGAPFTTDWLGTSPLHLAAQYGHYSTAEVLLRAGVSRDAR 412
LLEAAR G ++++ L+ N +D ++PLHLAA Y ++LL+ G A+
Sbjct: 339 LLEAARSGNEEKLMALLTPLNVNCHASDGRKSTPLHLAAGYNRVRIVQLLLQHGADVHAK 398
Query: 413 TKVDRTPLHMAAADGHAHIVELLVRNGADVNAKDMLKMTALHWATEHHHRDVVELLIKYG 592
K PLH A + GH + ELL+++GA VNA D+ + T LH A + +V LL+ +G
Sbjct: 399 DKGGLVPLHNACSYGHYEVTELLLKHGACVNAMDLWQFTPLHEAASKNRVEVCSLLLSHG 458
Query: 593 ADVHAFSKFDKSAFDIA 643
AD + KSA D+A
Sbjct: 459 ADPTLVNCHGKSAVDMA 475
Score = 85.9 bits (211), Expect = 5e-17
Identities = 53/144 (36%), Positives = 75/144 (52%), Gaps = 2/144 (1%)
Frame = +2
Query: 224 DLGKRLLEAARKGQDDEVRTLMANGAPFTTDWLG--TSPLHLAAQYGHYSTAEVLLRAGV 397
D+ RLLEA++ G + V+ L + D G ++PLH AA Y S E LL G
Sbjct: 649 DVDYRLLEASKAGDLETVKQLCSPQNVNCRDLEGRHSTPLHFAAGYNRVSVVEYLLHHGA 708
Query: 398 SRDARTKVDRTPLHMAAADGHAHIVELLVRNGADVNAKDMLKMTALHWATEHHHRDVVEL 577
A+ K PLH A + GH + ELLVR+GA VN D+ K T LH A ++ +L
Sbjct: 709 DVHAKDKGGLVPLHNACSYGHYEVAELLVRHGASVNVADLWKFTPLHEAAAKGKYEICKL 768
Query: 578 LIKYGADVHAFSKFDKSAFDIALE 649
L+K+GAD ++ + D+ E
Sbjct: 769 LLKHGADPTKKNRDGNTPLDLVKE 792
Score = 83.2 bits (204), Expect = 3e-16
Identities = 54/139 (38%), Positives = 72/139 (51%), Gaps = 2/139 (1%)
Frame = +2
Query: 233 KRLLEAARKGQDDEVRTLMANGAPFTTDWLG--TSPLHLAAQYGHYSTAEVLLRAGVSRD 406
+ LLEA R G V+ L+ D G +SPLH AA +G E LL+ G +
Sbjct: 184 RELLEACRNGDVSRVKRLVDAANVNAKDMAGRKSSPLHFAAGFGRKDVVEHLLQMGANVH 243
Query: 407 ARTKVDRTPLHMAAADGHAHIVELLVRNGADVNAKDMLKMTALHWATEHHHRDVVELLIK 586
AR PLH A + GHA +V LL+ GAD NA+D T LH A DV +L++
Sbjct: 244 ARDDGGLIPLHNACSFGHAEVVSLLLCQGADPNARDNWNYTPLHEAAIKGKIDVCIVLLQ 303
Query: 587 YGADVHAFSKFDKSAFDIA 643
+GAD + + KSA D+A
Sbjct: 304 HGADPNIRNTDGKSALDLA 322
Score = 75.1 bits (183), Expect = 9e-14
Identities = 64/192 (33%), Positives = 90/192 (46%), Gaps = 2/192 (1%)
Frame = +2
Query: 239 LLEAARKGQDDEVRTLMANGAPFTTDWLG--TSPLHLAAQYGHYSTAEVLLRAGVSRDAR 412
LL+AA+KG V+ L D G ++PLHLAA Y + AE LL G +A+
Sbjct: 807 LLDAAKKGCLARVQKLCTPENINCRDTQGRNSTPLHLAAGYNNLEVAEYLLEHGADVNAQ 866
Query: 413 TKVDRTPLHMAAADGHAHIVELLVRNGADVNAKDMLKMTALHWATEHHHRDVVELLIKYG 592
K PLH AA+ GH I LL++ VNA D T LH A + + LL+ +G
Sbjct: 867 DKGGLIPLHNAASYGHVDIAALLIKYNTCVNATDKWAFTPLHEAAQKGRTQLCALLLAHG 926
Query: 593 ADVHAFSKFDKSAFDIALEKNNAEILVILQEAMQNQVNANPERANSVTMATPFIFTSGEV 772
AD ++ ++ D+A +I +L +AM PE A P F
Sbjct: 927 ADPTMKNQEGQTPLDLATAD---DIRALLIDAMP------PE-------ALPTCFKPQAT 970
Query: 773 VNLASLVNSANT 808
V ASL++ A+T
Sbjct: 971 VVSASLISPAST 982
Score = 70.9 bits (172), Expect = 2e-12
Identities = 62/190 (32%), Positives = 87/190 (45%), Gaps = 22/190 (11%)
Frame = +2
Query: 239 LLEAARKGQDDEVRTLMANGA-PFTTDWLGTSPLHLA------AQYGHYSTAEVLLRA-- 391
L EAA KG+ D L+ +GA P + G S L LA G Y E+L A
Sbjct: 286 LHEAAIKGKIDVCIVLLQHGADPNIRNTDGKSALDLADPSAKAVLTGEYKKDELLEAARS 345
Query: 392 -------------GVSRDARTKVDRTPLHMAAADGHAHIVELLVRNGADVNAKDMLKMTA 532
V+ A TPLH+AA IV+LL+++GADV+AKD +
Sbjct: 346 GNEEKLMALLTPLNVNCHASDGRKSTPLHLAAGYNRVRIVQLLLQHGADVHAKDKGGLVP 405
Query: 533 LHWATEHHHRDVVELLIKYGADVHAFSKFDKSAFDIALEKNNAEILVILQEAMQNQVNAN 712
LH A + H +V ELL+K+GA V+A + + A KN E+ +L + N
Sbjct: 406 LHNACSYGHYEVTELLLKHGACVNAMDLWQFTPLHEAASKNRVEVCSLLLSHGADPTLVN 465
Query: 713 PERANSVTMA 742
++V MA
Sbjct: 466 CHGKSAVDMA 475
Score = 65.9 bits (159), Expect = 6e-11
Identities = 46/127 (36%), Positives = 64/127 (50%), Gaps = 4/127 (3%)
Frame = +2
Query: 230 GKRLLEAARKGQDDEVR-TLMANGAPFTTDWLGTSPLHLAAQYGH---YSTAEVLLRAGV 397
G LL+AAR+ +V+ TL F + LH A H E+LLR G
Sbjct: 490 GHSLLQAAREADLAKVKKTLALEIINFKQPQSHETALHCAVASLHPKRKQVTELLLRKGA 549
Query: 398 SRDARTKVDRTPLHMAAADGHAHIVELLVRNGADVNAKDMLKMTALHWATEHHHRDVVEL 577
+ + + K TPLH+AA H ++E+L ++GA +NA D L TALH A H L
Sbjct: 550 NVNEKNKDFMTPLHVAAERAHNDVMEVLHKHGAKMNALDTLGQTALHRAALAGHLQTCRL 609
Query: 578 LIKYGAD 598
L+ YG+D
Sbjct: 610 LLSYGSD 616
Score = 58.2 bits (139), Expect = 1e-08
Identities = 32/84 (38%), Positives = 46/84 (54%)
Frame = +2
Query: 428 TPLHMAAADGHAHIVELLVRNGADVNAKDMLKMTALHWATEHHHRDVVELLIKYGADVHA 607
TPLH AA +VE L+ +GADV+AKD + LH A + H +V ELL+++GA V+
Sbjct: 686 TPLHFAAGYNRVSVVEYLLHHGADVHAKDKGGLVPLHNACSYGHYEVAELLVRHGASVNV 745
Query: 608 FSKFDKSAFDIALEKNNAEILVIL 679
+ + A K EI +L
Sbjct: 746 ADLWKFTPLHEAAAKGKYEICKLL 769
Score = 54.7 bits (130), Expect = 1e-07
Identities = 46/156 (29%), Positives = 74/156 (47%), Gaps = 25/156 (16%)
Frame = +2
Query: 239 LLEAARKGQDDEVRTLMANGA-PFTTDWLGTSPLHLAA----------QYGHYSTAEVLL 385
L EAA K + + L+++GA P + G S + +A ++ +S +
Sbjct: 439 LHEAASKNRVEVCSLLLSHGADPTLVNCHGKSAVDMAPTPELRERLTYEFKGHSLLQAAR 498
Query: 386 RAGVSRDART-----------KVDRTPLHMAAADGHA---HIVELLVRNGADVNAKDMLK 523
A +++ +T + T LH A A H + ELL+R GA+VN K+
Sbjct: 499 EADLAKVKKTLALEIINFKQPQSHETALHCAVASLHPKRKQVTELLLRKGANVNEKNKDF 558
Query: 524 MTALHWATEHHHRDVVELLIKYGADVHAFSKFDKSA 631
MT LH A E H DV+E+L K+GA ++A ++A
Sbjct: 559 MTPLHVAAERAHNDVMEVLHKHGAKMNALDTLGQTA 594
Score = 53.5 bits (127), Expect = 3e-07
Identities = 32/107 (29%), Positives = 57/107 (53%)
Frame = +2
Query: 428 TPLHMAAADGHAHIVELLVRNGADVNAKDMLKMTALHWATEHHHRDVVELLIKYGADVHA 607
+PLH AA G +VE L++ GA+V+A+D + LH A H +VV LL+ GAD +A
Sbjct: 218 SPLHFAAGFGRKDVVEHLLQMGANVHARDDGGLIPLHNACSFGHAEVVSLLLCQGADPNA 277
Query: 608 FSKFDKSAFDIALEKNNAEILVILQEAMQNQVNANPERANSVTMATP 748
++ + A K ++ ++L + + N + +++ +A P
Sbjct: 278 RDNWNYTPLHEAAIKGKIDVCIVLLQHGADPNIRNTDGKSALDLADP 324
>ref|XP_002698732.1| PREDICTED: TRF1-interacting ankyrin-related ADP-ribose
polymerase-like [Bos taurus].
Length = 1327
Score = 88.2 bits (217), Expect = 1e-17
Identities = 52/137 (37%), Positives = 77/137 (56%), Gaps = 2/137 (1%)
Frame = +2
Query: 239 LLEAARKGQDDEVRTLMA--NGAPFTTDWLGTSPLHLAAQYGHYSTAEVLLRAGVSRDAR 412
LLEAAR G ++++ L+ N +D ++PLHLAA Y ++LL+ G A+
Sbjct: 339 LLEAARSGNEEKLMALLTPLNVNCHASDGRKSTPLHLAAGYNRVRIVQLLLQHGADVHAK 398
Query: 413 TKVDRTPLHMAAADGHAHIVELLVRNGADVNAKDMLKMTALHWATEHHHRDVVELLIKYG 592
K PLH A + GH + ELL+++GA VNA D+ + T LH A + +V LL+ +G
Sbjct: 399 DKGGLVPLHNACSYGHYEVTELLLKHGACVNAMDLWQFTPLHEAASKNRVEVCSLLLSHG 458
Query: 593 ADVHAFSKFDKSAFDIA 643
AD + KSA D+A
Sbjct: 459 ADPTLVNCHGKSAVDMA 475
Score = 85.9 bits (211), Expect = 5e-17
Identities = 53/144 (36%), Positives = 75/144 (52%), Gaps = 2/144 (1%)
Frame = +2
Query: 224 DLGKRLLEAARKGQDDEVRTLMANGAPFTTDWLG--TSPLHLAAQYGHYSTAEVLLRAGV 397
D+ RLLEA++ G + V+ L + D G ++PLH AA Y S E LL G
Sbjct: 649 DVDYRLLEASKAGDLETVKQLCSPQNVNCRDLEGRHSTPLHFAAGYNRVSVVEYLLHHGA 708
Query: 398 SRDARTKVDRTPLHMAAADGHAHIVELLVRNGADVNAKDMLKMTALHWATEHHHRDVVEL 577
A+ K PLH A + GH + ELLVR+GA VN D+ K T LH A ++ +L
Sbjct: 709 DVHAKDKGGLVPLHNACSYGHYEVAELLVRHGASVNVADLWKFTPLHEAAAKGKYEICKL 768
Query: 578 LIKYGADVHAFSKFDKSAFDIALE 649
L+K+GAD ++ + D+ E
Sbjct: 769 LLKHGADPTKKNRDGNTPLDLVKE 792
Score = 83.2 bits (204), Expect = 3e-16
Identities = 54/139 (38%), Positives = 72/139 (51%), Gaps = 2/139 (1%)
Frame = +2
Query: 233 KRLLEAARKGQDDEVRTLMANGAPFTTDWLG--TSPLHLAAQYGHYSTAEVLLRAGVSRD 406
+ LLEA R G V+ L+ D G +SPLH AA +G E LL+ G +
Sbjct: 184 RELLEACRNGDVSRVKRLVDAANVNAKDMAGRKSSPLHFAAGFGRKDVVEHLLQMGANVH 243
Query: 407 ARTKVDRTPLHMAAADGHAHIVELLVRNGADVNAKDMLKMTALHWATEHHHRDVVELLIK 586
AR PLH A + GHA +V LL+ GAD NA+D T LH A DV +L++
Sbjct: 244 ARDDGGLIPLHNACSFGHAEVVSLLLCQGADPNARDNWNYTPLHEAAIKGKIDVCIVLLQ 303
Query: 587 YGADVHAFSKFDKSAFDIA 643
+GAD + + KSA D+A
Sbjct: 304 HGADPNIRNTDGKSALDLA 322
Score = 75.1 bits (183), Expect = 9e-14
Identities = 64/192 (33%), Positives = 90/192 (46%), Gaps = 2/192 (1%)
Frame = +2
Query: 239 LLEAARKGQDDEVRTLMANGAPFTTDWLG--TSPLHLAAQYGHYSTAEVLLRAGVSRDAR 412
LL+AA+KG V+ L D G ++PLHLAA Y + AE LL G +A+
Sbjct: 807 LLDAAKKGCLARVQKLCTPENINCRDTQGRNSTPLHLAAGYNNLEVAEYLLEHGADVNAQ 866
Query: 413 TKVDRTPLHMAAADGHAHIVELLVRNGADVNAKDMLKMTALHWATEHHHRDVVELLIKYG 592
K PLH AA+ GH I LL++ VNA D T LH A + + LL+ +G
Sbjct: 867 DKGGLIPLHNAASYGHVDIAALLIKYNTCVNATDKWAFTPLHEAAQKGRTQLCALLLAHG 926
Query: 593 ADVHAFSKFDKSAFDIALEKNNAEILVILQEAMQNQVNANPERANSVTMATPFIFTSGEV 772
AD ++ ++ D+A +I +L +AM PE A P F
Sbjct: 927 ADPTMKNQEGQTPLDLATAD---DIRALLIDAMP------PE-------ALPTCFKPQAT 970
Query: 773 VNLASLVNSANT 808
V ASL++ A+T
Sbjct: 971 VVSASLISPAST 982
Score = 70.9 bits (172), Expect = 2e-12
Identities = 62/190 (32%), Positives = 87/190 (45%), Gaps = 22/190 (11%)
Frame = +2
Query: 239 LLEAARKGQDDEVRTLMANGA-PFTTDWLGTSPLHLA------AQYGHYSTAEVLLRA-- 391
L EAA KG+ D L+ +GA P + G S L LA G Y E+L A
Sbjct: 286 LHEAAIKGKIDVCIVLLQHGADPNIRNTDGKSALDLADPSAKAVLTGEYKKDELLEAARS 345
Query: 392 -------------GVSRDARTKVDRTPLHMAAADGHAHIVELLVRNGADVNAKDMLKMTA 532
V+ A TPLH+AA IV+LL+++GADV+AKD +
Sbjct: 346 GNEEKLMALLTPLNVNCHASDGRKSTPLHLAAGYNRVRIVQLLLQHGADVHAKDKGGLVP 405
Query: 533 LHWATEHHHRDVVELLIKYGADVHAFSKFDKSAFDIALEKNNAEILVILQEAMQNQVNAN 712
LH A + H +V ELL+K+GA V+A + + A KN E+ +L + N
Sbjct: 406 LHNACSYGHYEVTELLLKHGACVNAMDLWQFTPLHEAASKNRVEVCSLLLSHGADPTLVN 465
Query: 713 PERANSVTMA 742
++V MA
Sbjct: 466 CHGKSAVDMA 475
Score = 65.9 bits (159), Expect = 6e-11
Identities = 46/127 (36%), Positives = 64/127 (50%), Gaps = 4/127 (3%)
Frame = +2
Query: 230 GKRLLEAARKGQDDEVR-TLMANGAPFTTDWLGTSPLHLAAQYGH---YSTAEVLLRAGV 397
G LL+AAR+ +V+ TL F + LH A H E+LLR G
Sbjct: 490 GHSLLQAAREADLAKVKKTLALEIINFKQPQSHETALHCAVASLHPKRKQVTELLLRKGA 549
Query: 398 SRDARTKVDRTPLHMAAADGHAHIVELLVRNGADVNAKDMLKMTALHWATEHHHRDVVEL 577
+ + + K TPLH+AA H ++E+L ++GA +NA D L TALH A H L
Sbjct: 550 NVNEKNKDFMTPLHVAAERAHNDVMEVLHKHGAKMNALDTLGQTALHRAALAGHLQTCRL 609
Query: 578 LIKYGAD 598
L+ YG+D
Sbjct: 610 LLSYGSD 616
Score = 58.2 bits (139), Expect = 1e-08
Identities = 32/84 (38%), Positives = 46/84 (54%)
Frame = +2
Query: 428 TPLHMAAADGHAHIVELLVRNGADVNAKDMLKMTALHWATEHHHRDVVELLIKYGADVHA 607
TPLH AA +VE L+ +GADV+AKD + LH A + H +V ELL+++GA V+
Sbjct: 686 TPLHFAAGYNRVSVVEYLLHHGADVHAKDKGGLVPLHNACSYGHYEVAELLVRHGASVNV 745
Query: 608 FSKFDKSAFDIALEKNNAEILVIL 679
+ + A K EI +L
Sbjct: 746 ADLWKFTPLHEAAAKGKYEICKLL 769
Score = 54.7 bits (130), Expect = 1e-07
Identities = 46/156 (29%), Positives = 74/156 (47%), Gaps = 25/156 (16%)
Animal-Genome cDNA 20110601C-012619
Animal-Genome cDNA 20110601C-012619
Search to RefSeqCP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-012619
(1035 letters)
Database: RefSeq49_CP.fasta
33,336 sequences; 18,874,504 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_861489.1| PREDICTED: similar to GA repeat binding protein... 516 e-146
Alignment gi|XP_861390.1| PREDICTED: similar to GA repeat binding protein... 516 e-146
Alignment gi|XP_850473.1| PREDICTED: similar to GA repeat binding protein... 483 e-136
Alignment gi|XP_861458.1| PREDICTED: similar to GA repeat binding protein... 436 e-122
Alignment gi|XP_862360.1| PREDICTED: similar to GA binding protein beta c... 390 e-108
Alignment gi|XP_850867.1| PREDICTED: similar to GA binding protein beta c... 374 e-104
Alignment gi|XP_862447.1| PREDICTED: similar to GA binding protein transc... 374 e-104
Alignment gi|XP_862499.1| PREDICTED: similar to GA binding protein transc... 372 e-103
Alignment gi|XP_862473.1| PREDICTED: similar to GA binding protein transc... 372 e-103
Alignment gi|XP_862421.1| PREDICTED: similar to GA binding protein transc... 372 e-103
>ref|XP_861489.1| PREDICTED: similar to GA repeat binding protein, beta 2 isoform 7
[Canis familiaris].
Length = 407
Score = 516 bits (1330), Expect = e-146
Identities = 262/274 (95%), Positives = 267/274 (97%)
Frame = +2
Query: 212 MSLVDLGKRLLEAARKGQDDEVRTLMANGAPFTTDWLGTSPLHLAAQYGHYSTAEVLLRA 391
MSLVDLGKRLLEAARKGQDDEVRTLMANGAPFTTDWLGTSPLHLAAQYGHYSTAEVLLRA
Sbjct: 1 MSLVDLGKRLLEAARKGQDDEVRTLMANGAPFTTDWLGTSPLHLAAQYGHYSTAEVLLRA 60
Query: 392 GVSRDARTKVDRTPLHMAAADGHAHIVELLVRNGADVNAKDMLKMTALHWATEHHHRDVV 571
GVSRDARTKVDRTPLHMAAADGHAHIVELLVRNGADVNAKDMLKMTALHWATEHHHRDVV
Sbjct: 61 GVSRDARTKVDRTPLHMAAADGHAHIVELLVRNGADVNAKDMLKMTALHWATEHHHRDVV 120
Query: 572 ELLIKYGADVHAFSKFDKSAFDIALEKNNAEILVILQEAMQNQVNANPERANSVTMATPF 751
ELLIKYGADVHAFSKFDKSAFDIALEK NAEILVILQEAM+NQVNANPERAN VT+ PF
Sbjct: 121 ELLIKYGADVHAFSKFDKSAFDIALEKKNAEILVILQEAMRNQVNANPERANPVTVTAPF 180
Query: 752 IFTSGEVVNLASLVNSANTKTTSGNSEEIIDGNSVDSSIQQVVGSGGQRVITIVTDGVPL 931
IFTSGEVVNLASLV+SANTKTTS NSEEII+GNSVDSSIQQVVGSGGQRVITIVTDGVPL
Sbjct: 181 IFTSGEVVNLASLVSSANTKTTSANSEEIIEGNSVDSSIQQVVGSGGQRVITIVTDGVPL 240
Query: 932 GNIQAAVPTGGIGQPFIVTMQDGQQVLTVPAGQV 1033
GNIQ A+PTG IGQPFIVTMQDGQQVLTVPAGQV
Sbjct: 241 GNIQTAIPTGSIGQPFIVTMQDGQQVLTVPAGQV 274
>ref|XP_861390.1| PREDICTED: similar to GA repeat binding protein, beta 2 isoform 4
[Canis familiaris].
Length = 407
Score = 516 bits (1330), Expect = e-146
Identities = 262/274 (95%), Positives = 267/274 (97%)
Frame = +2
Query: 212 MSLVDLGKRLLEAARKGQDDEVRTLMANGAPFTTDWLGTSPLHLAAQYGHYSTAEVLLRA 391
MSLVDLGKRLLEAARKGQDDEVRTLMANGAPFTTDWLGTSPLHLAAQYGHYSTAEVLLRA
Sbjct: 1 MSLVDLGKRLLEAARKGQDDEVRTLMANGAPFTTDWLGTSPLHLAAQYGHYSTAEVLLRA 60
Query: 392 GVSRDARTKVDRTPLHMAAADGHAHIVELLVRNGADVNAKDMLKMTALHWATEHHHRDVV 571
GVSRDARTKVDRTPLHMAAADGHAHIVELLVRNGADVNAKDMLKMTALHWATEHHHRDVV
Sbjct: 61 GVSRDARTKVDRTPLHMAAADGHAHIVELLVRNGADVNAKDMLKMTALHWATEHHHRDVV 120
Query: 572 ELLIKYGADVHAFSKFDKSAFDIALEKNNAEILVILQEAMQNQVNANPERANSVTMATPF 751
ELLIKYGADVHAFSKFDKSAFDIALEK NAEILVILQEAM+NQVNANPERAN VT+ PF
Sbjct: 121 ELLIKYGADVHAFSKFDKSAFDIALEKKNAEILVILQEAMRNQVNANPERANPVTVTAPF 180
Query: 752 IFTSGEVVNLASLVNSANTKTTSGNSEEIIDGNSVDSSIQQVVGSGGQRVITIVTDGVPL 931
IFTSGEVVNLASLV+SANTKTTS NSEEII+GNSVDSSIQQVVGSGGQRVITIVTDGVPL
Sbjct: 181 IFTSGEVVNLASLVSSANTKTTSANSEEIIEGNSVDSSIQQVVGSGGQRVITIVTDGVPL 240
Query: 932 GNIQAAVPTGGIGQPFIVTMQDGQQVLTVPAGQV 1033
GNIQ A+PTG IGQPFIVTMQDGQQVLTVPAGQV
Sbjct: 241 GNIQTAIPTGSIGQPFIVTMQDGQQVLTVPAGQV 274
>ref|XP_850473.1| PREDICTED: similar to GA repeat binding protein, beta 2 isoform 3
[Canis familiaris].
Length = 436
Score = 483 bits (1243), Expect = e-136
Identities = 252/303 (83%), Positives = 261/303 (86%), Gaps = 29/303 (9%)
Frame = +2
Query: 212 MSLVDLGKRLLEAARKGQDDEVRTLMANGAPFTTDWLGTSPLHLAAQYGHYSTAEVLLRA 391
MSLVDLGKRLLEAARKGQDDEVRTLMANGAPFTTDWLGTSPLHLAAQYGHYSTAEVLLRA
Sbjct: 1 MSLVDLGKRLLEAARKGQDDEVRTLMANGAPFTTDWLGTSPLHLAAQYGHYSTAEVLLRA 60
Query: 392 GVSRDARTKVDRTPLHMAAADGHAHIVELLVRNGADVNAKDMLKMTALHWATEHHHRDVV 571
GVSRDARTKVDRTPLHMAAADGHAHIVELLVRNGADVNAKDMLKMTALHWATEHHHRDVV
Sbjct: 61 GVSRDARTKVDRTPLHMAAADGHAHIVELLVRNGADVNAKDMLKMTALHWATEHHHRDVV 120
Query: 572 ELLIKYGADVHAFSKFDKSAFDIALEKNNAEILVILQEAMQNQVNANPERANSVTMATPF 751
ELLIKYGADVHAFSKFDKSAFDIALEK NAEILVILQEAM+NQVNANPERAN VT+ PF
Sbjct: 121 ELLIKYGADVHAFSKFDKSAFDIALEKKNAEILVILQEAMRNQVNANPERANPVTVTAPF 180
Query: 752 IFTSGEVVNLASLVN-----------------------------SANTKTTSGNSEEIID 844
IFTSGEVVNLASL+ +N+ + +EEII+
Sbjct: 181 IFTSGEVVNLASLIGVSIRVQSGGKTTWRYCLATLAALAEASVPLSNSHRATVRAEEIIE 240
Query: 845 GNSVDSSIQQVVGSGGQRVITIVTDGVPLGNIQAAVPTGGIGQPFIVTMQDGQQVLTVPA 1024
GNSVDSSIQQVVGSGGQRVITIVTDGVPLGNIQ A+PTG IGQPFIVTMQDGQQVLTVPA
Sbjct: 241 GNSVDSSIQQVVGSGGQRVITIVTDGVPLGNIQTAIPTGSIGQPFIVTMQDGQQVLTVPA 300
Query: 1025 GQV 1033
GQV
Sbjct: 301 GQV 303
>ref|XP_861458.1| PREDICTED: similar to GA repeat binding protein, beta 2 isoform 6
[Canis familiaris].
Length = 391
Score = 436 bits (1121), Expect = e-122
Identities = 230/275 (83%), Positives = 240/275 (87%), Gaps = 1/275 (0%)
Frame = +2
Query: 212 MSLVDLGKRLLEAARKGQDDEVRTLMANGAPFTTDWLGTSPLHLAAQYGHYSTAEVLLRA 391
MSLVDLGKRLLEAARKGQDDEVRTLMANGAPFTTDWLGTSPLHLAAQYGHYSTAEVLLRA
Sbjct: 1 MSLVDLGKRLLEAARKGQDDEVRTLMANGAPFTTDWLGTSPLHLAAQYGHYSTAEVLLRA 60
Query: 392 GVSRDARTKVDRTPLHMAAADGHAHIVELLVRNGADVNAKDMLKMTALHWATEHHHRDVV 571
GVSRDARTKVDRTPLHMAAADGHAHIVELLVRNGADVNAKDMLKMTALHWATEHHHRDVV
Sbjct: 61 GVSRDARTKVDRTPLHMAAADGHAHIVELLVRNGADVNAKDMLKMTALHWATEHHHRDVV 120
Query: 572 ELLIKYGADVHAFSKFDKSAFDIALEKNNAEILVILQEAMQN-QVNANPERANSVTMATP 748
ELLIKYGADVHAFSKFDKSAFDIALEK NAEILVILQ+A+Q+ Q N N
Sbjct: 121 ELLIKYGADVHAFSKFDKSAFDIALEKKNAEILVILQDALQSLQSNIN------------ 168
Query: 749 FIFTSGEVVNLASLVNSANTKTTSGNSEEIIDGNSVDSSIQQVVGSGGQRVITIVTDGVP 928
S + +L S + ++ NSEEII+GNSVDSSIQQVVGSGGQRVITIVTDGVP
Sbjct: 169 ----SFSIPHLVQTEISNSFLSSLANSEEIIEGNSVDSSIQQVVGSGGQRVITIVTDGVP 224
Query: 929 LGNIQAAVPTGGIGQPFIVTMQDGQQVLTVPAGQV 1033
LGNIQ A+PTG IGQPFIVTMQDGQQVLTVPAGQV
Sbjct: 225 LGNIQTAIPTGSIGQPFIVTMQDGQQVLTVPAGQV 259
>ref|XP_862360.1| PREDICTED: similar to GA binding protein beta chain (GABP-beta-2
subunit) (GABP-2) (GABP-beta-1 subunit) (GABPB-1)
(Transcription factor E4TF1-53) (Transcription factor
E4TF1-47) (Nuclear respiratory factor-2) isoform 5 [Canis
familiaris].
Length = 356
Score = 390 bits (1002), Expect = e-108
Identities = 200/277 (72%), Positives = 233/277 (84%), Gaps = 3/277 (1%)
Frame = +2
Query: 212 MSLVDLGKRLLEAARKGQDDEVRTLMANGAPFTTDWLGTSPLHLAAQYGHYSTAEVLLRA 391
MSLVDLGK+LLEAAR GQDDEVR LMANGAPFTTDWLGTSPLHLAAQYGHYST EVLLRA
Sbjct: 1 MSLVDLGKKLLEAARAGQDDEVRILMANGAPFTTDWLGTSPLHLAAQYGHYSTTEVLLRA 60
Query: 392 GVSRDARTKVDRTPLHMAAADGHAHIVELLVRNGADVNAKDMLKMTALHWATEHHHRDVV 571
GVSRDARTKVDRTPLHMAA++GHA IVE+L+++GADVNAKDMLKMTALHWATEH+H++VV
Sbjct: 61 GVSRDARTKVDRTPLHMAASEGHASIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVV 120
Query: 572 ELLIKYGADVHAFSKFDKSAFDIALEKNNAEILVILQEAMQNQVNANPERANSVTM--AT 745
ELLIKYGADVH SKF K+AFDI+++ N ++ ILQ AMQNQ+N NPE ++VT+ AT
Sbjct: 121 ELLIKYGADVHTQSKFCKTAFDISIDNGNEDLAEILQIAMQNQINTNPESPDTVTIHAAT 180
Query: 746 P-FIFTSGEVVNLASLVNSANTKTTSGNSEEIIDGNSVDSSIQQVVGSGGQRVITIVTDG 922
P FI G VVNL LV+S N+ + +EE++ SVD +IQQVV SGGQ+VITIVTDG
Sbjct: 181 PQFIIGPGGVVNLTGLVSSENSSKATVATEEVVTAESVDGAIQQVVSSGGQQVITIVTDG 240
Query: 923 VPLGNIQAAVPTGGIGQPFIVTMQDGQQVLTVPAGQV 1033
+ LGN+ ++PT GIGQP IVTM DGQQVLTVPA +
Sbjct: 241 IQLGNLH-SIPTSGIGQPIIVTMPDGQQVLTVPATDI 276
>ref|XP_850867.1| PREDICTED: similar to GA binding protein beta chain (GABP-beta-2
subunit) (GABP-2) (GABP-beta-1 subunit) (GABPB-1)
(Transcription factor E4TF1-53) (Transcription factor
E4TF1-47) (Nuclear respiratory factor-2) isoform 1 [Canis
familiaris].
Length = 395
Score = 374 bits (961), Expect = e-104
Identities = 203/316 (64%), Positives = 235/316 (74%), Gaps = 42/316 (13%)
Frame = +2
Query: 212 MSLVDLGKRLLEAARKGQDDEVRTLMANGAPFTTDWLGTSPLHLAAQYGHYSTAEVLLRA 391
MSLVDLGK+LLEAAR GQDDEVR LMANGAPFTTDWLGTSPLHLAAQYGHYST EVLLRA
Sbjct: 1 MSLVDLGKKLLEAARAGQDDEVRILMANGAPFTTDWLGTSPLHLAAQYGHYSTTEVLLRA 60
Query: 392 GVSRDARTKVDRTPLHMAAADGHAHIVELLVRNGADVNAKDMLKMTALHWATEHHHRDVV 571
GVSRDARTKVDRTPLHMAA++GHA IVE+L+++GADVNAKDMLKMTALHWATEH+H++VV
Sbjct: 61 GVSRDARTKVDRTPLHMAASEGHASIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVV 120
Query: 572 ELLIKYGADVHAFSKFDKSAFDIALEKNNAEILVILQEAMQNQVNANPERANSVTM--AT 745
ELLIKYGADVH SKF K+AFDI+++ N ++ ILQ AMQNQ+N NPE ++VT+ AT
Sbjct: 121 ELLIKYGADVHTQSKFCKTAFDISIDNGNEDLAEILQIAMQNQINTNPESPDTVTIHAAT 180
Query: 746 P-FIFTSGEVVNLASLVNSANTKTTS----------GNS--------------------- 829
P FI G VVNL LV+S N+ + GNS
Sbjct: 181 PQFIIGPGGVVNLTGLVSSENSSKATDETGVSAVQFGNSSTSVLATLAALAEASAPLSNS 240
Query: 830 --------EEIIDGNSVDSSIQQVVGSGGQRVITIVTDGVPLGNIQAAVPTGGIGQPFIV 985
EE++ SVD +IQQVV SGGQ+VITIVTDG+ LGN+ ++PT GIGQP IV
Sbjct: 241 SETPVVATEEVVTAESVDGAIQQVVSSGGQQVITIVTDGIQLGNLH-SIPTSGIGQPIIV 299
Query: 986 TMQDGQQVLTVPAGQV 1033
TM DGQQVLTVPA +
Sbjct: 300 TMPDGQQVLTVPATDI 315
>ref|XP_862447.1| PREDICTED: similar to GA binding protein transcription factor, beta
subunit 2 isoform gamma 1 isoform 8 [Canis familiaris].
Length = 360
Score = 374 bits (961), Expect = e-104
Identities = 203/316 (64%), Positives = 235/316 (74%), Gaps = 42/316 (13%)
Frame = +2
Query: 212 MSLVDLGKRLLEAARKGQDDEVRTLMANGAPFTTDWLGTSPLHLAAQYGHYSTAEVLLRA 391
MSLVDLGK+LLEAAR GQDDEVR LMANGAPFTTDWLGTSPLHLAAQYGHYST EVLLRA
Sbjct: 1 MSLVDLGKKLLEAARAGQDDEVRILMANGAPFTTDWLGTSPLHLAAQYGHYSTTEVLLRA 60
Query: 392 GVSRDARTKVDRTPLHMAAADGHAHIVELLVRNGADVNAKDMLKMTALHWATEHHHRDVV 571
GVSRDARTKVDRTPLHMAA++GHA IVE+L+++GADVNAKDMLKMTALHWATEH+H++VV
Sbjct: 61 GVSRDARTKVDRTPLHMAASEGHASIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVV 120
Query: 572 ELLIKYGADVHAFSKFDKSAFDIALEKNNAEILVILQEAMQNQVNANPERANSVTM--AT 745
ELLIKYGADVH SKF K+AFDI+++ N ++ ILQ AMQNQ+N NPE ++VT+ AT
Sbjct: 121 ELLIKYGADVHTQSKFCKTAFDISIDNGNEDLAEILQIAMQNQINTNPESPDTVTIHAAT 180
Query: 746 P-FIFTSGEVVNLASLVNSANTKTTS----------GNS--------------------- 829
P FI G VVNL LV+S N+ + GNS
Sbjct: 181 PQFIIGPGGVVNLTGLVSSENSSKATDETGVSAVQFGNSSTSVLATLAALAEASAPLSNS 240
Query: 830 --------EEIIDGNSVDSSIQQVVGSGGQRVITIVTDGVPLGNIQAAVPTGGIGQPFIV 985
EE++ SVD +IQQVV SGGQ+VITIVTDG+ LGN+ ++PT GIGQP IV
Sbjct: 241 SETPVVATEEVVTAESVDGAIQQVVSSGGQQVITIVTDGIQLGNLH-SIPTSGIGQPIIV 299
Query: 986 TMQDGQQVLTVPAGQV 1033
TM DGQQVLTVPA +
Sbjct: 300 TMPDGQQVLTVPATDI 315
>ref|XP_862499.1| PREDICTED: similar to GA binding protein transcription factor, beta
subunit 2 isoform gamma 2 isoform 10 [Canis familiaris].
Length = 348
Score = 372 bits (956), Expect = e-103
Identities = 201/306 (65%), Positives = 233/306 (76%), Gaps = 32/306 (10%)
Frame = +2
Query: 212 MSLVDLGKRLLEAARKGQDDEVRTLMANGAPFTTDWLGTSPLHLAAQYGHYSTAEVLLRA 391
MSLVDLGK+LLEAAR GQDDEVR LMANGAPFTTDWLGTSPLHLAAQYGHYST EVLLRA
Sbjct: 1 MSLVDLGKKLLEAARAGQDDEVRILMANGAPFTTDWLGTSPLHLAAQYGHYSTTEVLLRA 60
Query: 392 GVSRDARTKVDRTPLHMAAADGHAHIVELLVRNGADVNAKDMLKMTALHWATEHHHRDVV 571
GVSRDARTKVDRTPLHMAA++GHA IVE+L+++GADVNAKDMLKMTALHWATEH+H++VV
Sbjct: 61 GVSRDARTKVDRTPLHMAASEGHASIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVV 120
Query: 572 ELLIKYGADVHAFSKFDKSAFDIALEKNNAEILVILQEAMQNQVNANPERANSVTM--AT 745
ELLIKYGADVH SKF K+AFDI+++ N ++ ILQ AMQNQ+N NPE ++VT+ AT
Sbjct: 121 ELLIKYGADVHTQSKFCKTAFDISIDNGNEDLAEILQIAMQNQINTNPESPDTVTIHAAT 180
Query: 746 P-FIFTSGEVVNL-----------------------------ASLVNSANTKTTSGNSEE 835
P FI G VVNL A L NS+ T + +EE
Sbjct: 181 PQFIIGPGGVVNLTDETGVSAVQFGNSSTSVLATLAALAEASAPLSNSSETPVVA--TEE 238
Query: 836 IIDGNSVDSSIQQVVGSGGQRVITIVTDGVPLGNIQAAVPTGGIGQPFIVTMQDGQQVLT 1015
++ SVD +IQQVV SGGQ+VITIVTDG+ LGN+ ++PT GIGQP IVTM DGQQVLT
Sbjct: 239 VVTAESVDGAIQQVVSSGGQQVITIVTDGIQLGNLH-SIPTSGIGQPIIVTMPDGQQVLT 297
Query: 1016 VPAGQV 1033
VPA +
Sbjct: 298 VPATDI 303
>ref|XP_862473.1| PREDICTED: similar to GA binding protein transcription factor, beta
subunit 2 isoform beta 2 isoform 9 [Canis familiaris].
Length = 402
Score = 372 bits (956), Expect = e-103
Identities = 201/306 (65%), Positives = 233/306 (76%), Gaps = 32/306 (10%)
Frame = +2
Query: 212 MSLVDLGKRLLEAARKGQDDEVRTLMANGAPFTTDWLGTSPLHLAAQYGHYSTAEVLLRA 391
MSLVDLGK+LLEAAR GQDDEVR LMANGAPFTTDWLGTSPLHLAAQYGHYST EVLLRA
Sbjct: 1 MSLVDLGKKLLEAARAGQDDEVRILMANGAPFTTDWLGTSPLHLAAQYGHYSTTEVLLRA 60
Query: 392 GVSRDARTKVDRTPLHMAAADGHAHIVELLVRNGADVNAKDMLKMTALHWATEHHHRDVV 571
GVSRDARTKVDRTPLHMAA++GHA IVE+L+++GADVNAKDMLKMTALHWATEH+H++VV
Sbjct: 61 GVSRDARTKVDRTPLHMAASEGHASIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVV 120
Query: 572 ELLIKYGADVHAFSKFDKSAFDIALEKNNAEILVILQEAMQNQVNANPERANSVTM--AT 745
ELLIKYGADVH SKF K+AFDI+++ N ++ ILQ AMQNQ+N NPE ++VT+ AT
Sbjct: 121 ELLIKYGADVHTQSKFCKTAFDISIDNGNEDLAEILQIAMQNQINTNPESPDTVTIHAAT 180
Query: 746 P-FIFTSGEVVNL-----------------------------ASLVNSANTKTTSGNSEE 835
P FI G VVNL A L NS+ T + +EE
Sbjct: 181 PQFIIGPGGVVNLTDETGVSAVQFGNSSTSVLATLAALAEASAPLSNSSETPVVA--TEE 238
Query: 836 IIDGNSVDSSIQQVVGSGGQRVITIVTDGVPLGNIQAAVPTGGIGQPFIVTMQDGQQVLT 1015
++ SVD +IQQVV SGGQ+VITIVTDG+ LGN+ ++PT GIGQP IVTM DGQQVLT
Sbjct: 239 VVTAESVDGAIQQVVSSGGQQVITIVTDGIQLGNLH-SIPTSGIGQPIIVTMPDGQQVLT 297
Query: 1016 VPAGQV 1033
VPA +
Sbjct: 298 VPATDI 303
>ref|XP_862421.1| PREDICTED: similar to GA binding protein transcription factor, beta
subunit 2 isoform beta 2 isoform 7 [Canis familiaris].
Length = 383
Score = 372 bits (956), Expect = e-103
Identities = 201/306 (65%), Positives = 233/306 (76%), Gaps = 32/306 (10%)
Frame = +2
Query: 212 MSLVDLGKRLLEAARKGQDDEVRTLMANGAPFTTDWLGTSPLHLAAQYGHYSTAEVLLRA 391
MSLVDLGK+LLEAAR GQDDEVR LMANGAPFTTDWLGTSPLHLAAQYGHYST EVLLRA
Sbjct: 1 MSLVDLGKKLLEAARAGQDDEVRILMANGAPFTTDWLGTSPLHLAAQYGHYSTTEVLLRA 60
Query: 392 GVSRDARTKVDRTPLHMAAADGHAHIVELLVRNGADVNAKDMLKMTALHWATEHHHRDVV 571
GVSRDARTKVDRTPLHMAA++GHA IVE+L+++GADVNAKDMLKMTALHWATEH+H++VV
Sbjct: 61 GVSRDARTKVDRTPLHMAASEGHASIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVV 120
Query: 572 ELLIKYGADVHAFSKFDKSAFDIALEKNNAEILVILQEAMQNQVNANPERANSVTM--AT 745
ELLIKYGADVH SKF K+AFDI+++ N ++ ILQ AMQNQ+N NPE ++VT+ AT
Sbjct: 121 ELLIKYGADVHTQSKFCKTAFDISIDNGNEDLAEILQIAMQNQINTNPESPDTVTIHAAT 180
Query: 746 P-FIFTSGEVVNL-----------------------------ASLVNSANTKTTSGNSEE 835
P FI G VVNL A L NS+ T + +EE
Sbjct: 181 PQFIIGPGGVVNLTDETGVSAVQFGNSSTSVLATLAALAEASAPLSNSSETPVVA--TEE 238
Query: 836 IIDGNSVDSSIQQVVGSGGQRVITIVTDGVPLGNIQAAVPTGGIGQPFIVTMQDGQQVLT 1015
++ SVD +IQQVV SGGQ+VITIVTDG+ LGN+ ++PT GIGQP IVTM DGQQVLT
Sbjct: 239 VVTAESVDGAIQQVVSSGGQQVITIVTDGIQLGNLH-SIPTSGIGQPIIVTMPDGQQVLT 297
Query: 1016 VPAGQV 1033
VPA +
Sbjct: 298 VPATDI 303
Database: RefSeq49_CP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,874,504
Number of sequences in database: 33,336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33336
Number of Hits to DB: 44,436,165
Number of extensions: 1232649
Number of successful extensions: 6239
Number of sequences better than 1.0e-05: 252
Number of HSP's gapped: 5215
Number of HSP's successfully gapped: 1240
Length of query: 345
Length of database: 18,874,504
Length adjustment: 104
Effective length of query: 241
Effective length of database: 15,407,560
Effective search space: 3713221960
Effective search space used: 3713221960
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Frame = +2
Query: 239 LLEAARKGQDDEVRTLMANGA-PFTTDWLGTSPLHLAA----------QYGHYSTAEVLL 385
L EAA K + + L+++GA P + G S + +A ++ +S +
Sbjct: 439 LHEAASKNRVEVCSLLLSHGADPTLVNCHGKSAVDMAPTPELRERLTYEFKGHSLLQAAR 498
Query: 386 RAGVSRDART-----------KVDRTPLHMAAADGHA---HIVELLVRNGADVNAKDMLK 523
A +++ +T + T LH A A H + ELL+R GA+VN K+
Sbjct: 499 EADLAKVKKTLALEIINFKQPQSHETALHCAVASLHPKRKQVTELLLRKGANVNEKNKDF 558
Query: 524 MTALHWATEHHHRDVVELLIKYGADVHAFSKFDKSA 631
MT LH A E H DV+E+L K+GA ++A ++A
Sbjct: 559 MTPLHVAAERAHNDVMEVLHKHGAKMNALDTLGQTA 594
Score = 53.5 bits (127), Expect = 3e-07
Identities = 32/107 (29%), Positives = 57/107 (53%)
Frame = +2
Query: 428 TPLHMAAADGHAHIVELLVRNGADVNAKDMLKMTALHWATEHHHRDVVELLIKYGADVHA 607
+PLH AA G +VE L++ GA+V+A+D + LH A H +VV LL+ GAD +A
Sbjct: 218 SPLHFAAGFGRKDVVEHLLQMGANVHARDDGGLIPLHNACSFGHAEVVSLLLCQGADPNA 277
Query: 608 FSKFDKSAFDIALEKNNAEILVILQEAMQNQVNANPERANSVTMATP 748
++ + A K ++ ++L + + N + +++ +A P
Sbjct: 278 RDNWNYTPLHEAAIKGKIDVCIVLLQHGADPNIRNTDGKSALDLADP 324
>ref|XP_001787700.1| PREDICTED: ankyrin 2 [Bos taurus].
Length = 3984
Score = 86.7 bits (213), Expect = 3e-17
Identities = 52/155 (33%), Positives = 85/155 (54%), Gaps = 1/155 (0%)
Frame = +2
Query: 224 DLGKRLLEAARKGQDDEVRTLMANGAPFTT-DWLGTSPLHLAAQYGHYSTAEVLLRAGVS 400
D L AAR G D+V + G T + G + LHLAA+ GH + LL G +
Sbjct: 30 DSNASFLRAARAGNLDKVVEYLKGGIDINTCNQNGLNALHLAAKEGHVGLVQELLGRGSA 89
Query: 401 RDARTKVDRTPLHMAAADGHAHIVELLVRNGADVNAKDMLKMTALHWATEHHHRDVVELL 580
D+ TK T LH+A+ G A +V++LV+ GA++NA+ T L+ A + +H DVV+ L
Sbjct: 90 VDSATKKGNTALHIASLAGQAEVVKVLVKEGANINAQSQNGFTPLYMAAQENHIDVVKYL 149
Query: 581 IKYGADVHAFSKFDKSAFDIALEKNNAEILVILQE 685
++ GA+ ++ + +AL++ + + + IL E
Sbjct: 150 LENGANQSTATEDGFTPLAVALQQGHNQAVAILLE 184
Score = 80.1 bits (196), Expect = 3e-15
Identities = 56/161 (34%), Positives = 83/161 (51%), Gaps = 1/161 (0%)
Frame = +2
Query: 248 AARKGQDDEVRTLMANGAPFTTDWL-GTSPLHLAAQYGHYSTAEVLLRAGVSRDARTKVD 424
AAR G D V L+ GAP G SPLH+AAQ H + LL+ D T
Sbjct: 306 AARSGHDQVVELLLERGAPLLARTKNGLSPLHMAAQGDHVECVKHLLQHKAPVDDVTLDY 365
Query: 425 RTPLHMAAADGHAHIVELLVRNGADVNAKDMLKMTALHWATEHHHRDVVELLIKYGADVH 604
T LH+AA GH + +LL+ A+ NA+ + T LH A + + V+ELL+KYGA +
Sbjct: 366 LTALHVAAHCGHYRVTKLLLDKRANPNARALNGFTPLHIACKKNRIKVMELLVKYGASIQ 425
Query: 605 AFSKFDKSAFDIALEKNNAEILVILQEAMQNQVNANPERAN 727
A ++ + +A + I+++L +QN A+P+ N
Sbjct: 426 AITESGLTPIHVAAFMGHLNIVLLL---LQN--GASPDVTN 461
Score = 79.3 bits (194), Expect = 5e-15
Identities = 60/199 (30%), Positives = 98/199 (49%), Gaps = 3/199 (1%)
Frame = +2
Query: 248 AARKGQDDEVRTLMANGAPFT-TDWLGTSPLHLAAQYGHYSTAEVLLRAGVSRDARTKVD 424
AA+K Q TL++ GA G +PLHLA+Q GH +LL G + TK
Sbjct: 636 AAKKNQMQIASTLLSYGAETNIVTKQGVTPLHLASQEGHTDMVTLLLDKGANIHMSTKSG 695
Query: 425 RTPLHMAAADGHAHIVELLVRNGADVNAKDMLKMTALHWATEHHHRDVVELLIKYGADVH 604
T LH+AA + ++ ++L ++GAD +A L T L A + + +V L+K GA+V+
Sbjct: 696 LTSLHLAAQEDKVNVADILTKHGADQDAHTKLGYTPLIVACHYGNVKMVNFLLKQGANVN 755
Query: 605 AFSKFDKSAFDIALEKNNAEILVILQE--AMQNQVNANPERANSVTMATPFIFTSGEVVN 778
A +K + A ++ + I+ +L + A N AN A ++ +I VV+
Sbjct: 756 AKTKNGYTPLHQAAQQGHTHIINVLLQHGAKPNATTANGNTALAIAKRLGYI----SVVD 811
Query: 779 LASLVNSANTKTTSGNSEE 835
+V T TT+ +E+
Sbjct: 812 TLKVVTEEVTTTTTTITEK 830
Score = 77.0 bits (188), Expect = 2e-14
Identities = 48/141 (34%), Positives = 76/141 (53%), Gaps = 1/141 (0%)
Frame = +2
Query: 248 AARKGQDDEVRTLMANGA-PFTTDWLGTSPLHLAAQYGHYSTAEVLLRAGVSRDARTKVD 424
A+R G+ + V+ L+ + A P G +PLH++A+ G A VLL AG + TK
Sbjct: 504 ASRLGKTEIVQLLLQHMAHPDAATTNGYTPLHISAREGQVDVASVLLEAGAAHSLATKKG 563
Query: 425 RTPLHMAAADGHAHIVELLVRNGADVNAKDMLKMTALHWATEHHHRDVVELLIKYGADVH 604
TPLH+AA G + +LL++ A ++ +T LH A + ++ V LL++ GA H
Sbjct: 564 FTPLHVAAKYGSLDVAKLLLQRRAAADSAGKNGLTPLHVAAHYDNQKVALLLLEKGASPH 623
Query: 605 AFSKFDKSAFDIALEKNNAEI 667
A +K + IA +KN +I
Sbjct: 624 AMAKNGYTPLHIAAKKNQMQI 644
Score = 76.3 bits (186), Expect = 4e-14
Identities = 42/114 (36%), Positives = 67/114 (58%)
Frame = +2
Query: 323 GTSPLHLAAQYGHYSTAEVLLRAGVSRDARTKVDRTPLHMAAADGHAHIVELLVRNGADV 502
G +PLH+AA YG+ + A +LL G + D + TPLH+A+ G+ ++V+LL+ G +
Sbjct: 233 GFTPLHIAAHYGNVNVATLLLNRGAAVDFTARNGITPLHVASKRGNTNMVKLLLDRGGQI 292
Query: 503 NAKDMLKMTALHWATEHHHRDVVELLIKYGADVHAFSKFDKSAFDIALEKNNAE 664
+AK +T LH A H VVELL++ GA + A +K S +A + ++ E
Sbjct: 293 DAKTRDGLTPLHCAARSGHDQVVELLLERGAPLLARTKNGLSPLHMAAQGDHVE 346
Score = 75.9 bits (185), Expect = 6e-14
Identities = 47/145 (32%), Positives = 73/145 (50%), Gaps = 1/145 (0%)
Frame = +2
Query: 248 AARKGQDDEVRTLMAN-GAPFTTDWLGTSPLHLAAQYGHYSTAEVLLRAGVSRDARTKVD 424
AA+ G D + L+ A + G +PLH+AA Y + A +LL G S A K
Sbjct: 570 AAKYGSLDVAKLLLQRRAAADSAGKNGLTPLHVAAHYDNQKVALLLLEKGASPHAMAKNG 629
Query: 425 RTPLHMAAADGHAHIVELLVRNGADVNAKDMLKMTALHWATEHHHRDVVELLIKYGADVH 604
TPLH+AA I L+ GA+ N +T LH A++ H D+V LL+ GA++H
Sbjct: 630 YTPLHIAAKKNQMQIASTLLSYGAETNIVTKQGVTPLHLASQEGHTDMVTLLLDKGANIH 689
Query: 605 AFSKFDKSAFDIALEKNNAEILVIL 679
+K ++ +A +++ + IL
Sbjct: 690 MSTKSGLTSLHLAAQEDKVNVADIL 714
Score = 75.9 bits (185), Expect = 6e-14
Identities = 43/138 (31%), Positives = 71/138 (51%)
Frame = +2
Query: 323 GTSPLHLAAQYGHYSTAEVLLRAGVSRDARTKVDRTPLHMAAADGHAHIVELLVRNGADV 502
G +PLH+AA+ A LL G + TK TPLH+A+ +GH +V LL+ GA++
Sbjct: 629 GYTPLHIAAKKNQMQIASTLLSYGAETNIVTKQGVTPLHLASQEGHTDMVTLLLDKGANI 688
Query: 503 NAKDMLKMTALHWATEHHHRDVVELLIKYGADVHAFSKFDKSAFDIALEKNNAEILVILQ 682
+ +T+LH A + +V ++L K+GAD A +K + +A N +++ L
Sbjct: 689 HMSTKSGLTSLHLAAQEDKVNVADILTKHGADQDAHTKLGYTPLIVACHYGNVKMVNFL- 747
Query: 683 EAMQNQVNANPERANSVT 736
++ N N + N T
Sbjct: 748 --LKQGANVNAKTKNGYT 763
Score = 73.9 bits (180), Expect = 2e-13
Identities = 51/160 (31%), Positives = 84/160 (52%)
Frame = +2
Query: 323 GTSPLHLAAQYGHYSTAEVLLRAGVSRDARTKVDRTPLHMAAADGHAHIVELLVRNGADV 502
G +PLH+A + E+L++ G S A T+ TP+H+AA GH +IV LL++NGA
Sbjct: 398 GFTPLHIACKKNRIKVMELLVKYGASIQAITESGLTPIHVAAFMGHLNIVLLLLQNGASP 457
Query: 503 NAKDMLKMTALHWATEHHHRDVVELLIKYGADVHAFSKFDKSAFDIALEKNNAEILVILQ 682
+ ++ TALH A +VV L++ GA V A ++ +++ IA EI+ +L
Sbjct: 458 DVTNIRGETALHMAARAGQVEVVRCLLRNGALVDARAREEQTPLHIASRLGKTEIVQLLL 517
Query: 683 EAMQNQVNANPERANSVTMATPFIFTSGEVVNLASLVNSA 802
+ M A+P+ A + I V++AS++ A
Sbjct: 518 QHM-----AHPDAATTNGYTPLHISAREGQVDVASVLLEA 552
Score = 73.2 bits (178), Expect = 4e-13
Identities = 52/197 (26%), Positives = 94/197 (47%), Gaps = 1/197 (0%)
Frame = +2
Query: 248 AARKGQDDEVRTLMANGAPFT-TDWLGTSPLHLAAQYGHYSTAEVLLRAGVSRDARTKVD 424
+AR+GQ D L+ GA + G +PLH+AA+YG A++LL+ + D+ K
Sbjct: 537 SAREGQVDVASVLLEAGAAHSLATKKGFTPLHVAAKYGSLDVAKLLLQRRAAADSAGKNG 596
Query: 425 RTPLHMAAADGHAHIVELLVRNGADVNAKDMLKMTALHWATEHHHRDVVELLIKYGADVH 604
TPLH+AA + + LL+ GA +A T LH A + + + L+ YGA+ +
Sbjct: 597 LTPLHVAAHYDNQKVALLLLEKGASPHAMAKNGYTPLHIAAKKNQMQIASTLLSYGAETN 656
Query: 605 AFSKFDKSAFDIALEKNNAEILVILQEAMQNQVNANPERANSVTMATPFIFTSGEVVNLA 784
+K + +A ++ + +++ +L ++ ++ M+T TS +
Sbjct: 657 IVTKQGVTPLHLASQEGHTDMVTLLL-----------DKGANIHMSTKSGLTSLHLAAQE 705
Query: 785 SLVNSANTKTTSGNSEE 835
VN A+ T G ++
Sbjct: 706 DKVNVADILTKHGADQD 722
Score = 72.8 bits (177), Expect = 5e-13
Identities = 50/147 (34%), Positives = 78/147 (53%), Gaps = 3/147 (2%)
Frame = +2
Query: 248 AARKGQDDEVRTLMANGAPF---TTDWLGTSPLHLAAQYGHYSTAEVLLRAGVSRDARTK 418
A+++G + V+ L+ G T D G +PLH AA+ GH E+LL G ARTK
Sbjct: 273 ASKRGNTNMVKLLLDRGGQIDAKTRD--GLTPLHCAARSGHDQVVELLLERGAPLLARTK 330
Query: 419 VDRTPLHMAAADGHAHIVELLVRNGADVNAKDMLKMTALHWATEHHHRDVVELLIKYGAD 598
+PLHMAA H V+ L+++ A V+ + +TALH A H V +LL+ A+
Sbjct: 331 NGLSPLHMAAQGDHVECVKHLLQHKAPVDDVTLDYLTALHVAAHCGHYRVTKLLLDKRAN 390
Query: 599 VHAFSKFDKSAFDIALEKNNAEILVIL 679
+A + + IA +KN +++ +L
Sbjct: 391 PNARALNGFTPLHIACKKNRIKVMELL 417
Score = 70.1 bits (170), Expect = 3e-12
Identities = 49/164 (29%), Positives = 81/164 (49%), Gaps = 1/164 (0%)
Frame = +2
Query: 248 AARKGQDDEVRTLMANGAPFT-TDWLGTSPLHLAAQYGHYSTAEVLLRAGVSRDARTKVD 424
AA G + L+ GA T G +PLH+A++ G+ + ++LL G DA+T+
Sbjct: 240 AAHYGNVNVATLLLNRGAAVDFTARNGITPLHVASKRGNTNMVKLLLDRGGQIDAKTRDG 299
Query: 425 RTPLHMAAADGHAHIVELLVRNGADVNAKDMLKMTALHWATEHHHRDVVELLIKYGADVH 604
TPLH AA GH +VELL+ GA + A+ ++ LH A + H + V+ L+++ A V
Sbjct: 300 LTPLHCAARSGHDQVVELLLERGAPLLARTKNGLSPLHMAAQGDHVECVKHLLQHKAPVD 359
Query: 605 AFSKFDKSAFDIALEKNNAEILVILQEAMQNQVNANPERANSVT 736
+ +A +A + + +L + + N N N T
Sbjct: 360 DVTLDYLTALHVAAHCGHYRVTKLL---LDKRANPNARALNGFT 400
Score = 68.2 bits (165), Expect = 1e-11
Identities = 50/164 (30%), Positives = 82/164 (50%), Gaps = 1/164 (0%)
Frame = +2
Query: 248 AARKGQDDEVRTLMANGA-PFTTDWLGTSPLHLAAQYGHYSTAEVLLRAGVSRDARTKVD 424
AA G + V L+ NGA P T+ G + LH+AA+ G LLR G DAR + +
Sbjct: 438 AAFMGHLNIVLLLLQNGASPDVTNIRGETALHMAARAGQVEVVRCLLRNGALVDARAREE 497
Query: 425 RTPLHMAAADGHAHIVELLVRNGADVNAKDMLKMTALHWATEHHHRDVVELLIKYGADVH 604
+TPLH+A+ G IV+LL+++ A +A T LH + DV +L++ GA
Sbjct: 498 QTPLHIASRLGKTEIVQLLLQHMAHPDAATTNGYTPLHISAREGQVDVASVLLEAGAAHS 557
Query: 605 AFSKFDKSAFDIALEKNNAEILVILQEAMQNQVNANPERANSVT 736
+K + +A + + ++ +L +Q + A+ N +T
Sbjct: 558 LATKKGFTPLHVAAKYGSLDVAKLL---LQRRAAADSAGKNGLT 598
Score = 65.1 bits (157), Expect = 1e-10
Identities = 44/147 (29%), Positives = 73/147 (49%), Gaps = 1/147 (0%)
Frame = +2
Query: 248 AARKGQDDEVRTLMANGAPFTTDWLGT-SPLHLAAQYGHYSTAEVLLRAGVSRDARTKVD 424
AAR GQ + VR L+ NGA +PLH+A++ G ++LL+ DA T
Sbjct: 471 AARAGQVEVVRCLLRNGALVDARAREEQTPLHIASRLGKTEIVQLLLQHMAHPDAATTNG 530
Query: 425 RTPLHMAAADGHAHIVELLVRNGADVNAKDMLKMTALHWATEHHHRDVVELLIKYGADVH 604
TPLH++A +G + +L+ GA + T LH A ++ DV +LL++ A
Sbjct: 531 YTPLHISAREGQVDVASVLLEAGAAHSLATKKGFTPLHVAAKYGSLDVAKLLLQRRAAAD 590
Query: 605 AFSKFDKSAFDIALEKNNAEILVILQE 685
+ K + +A +N ++ ++L E
Sbjct: 591 SAGKNGLTPLHVAAHYDNQKVALLLLE 617
Score = 57.0 bits (136), Expect = 3e-08
Identities = 36/133 (27%), Positives = 70/133 (52%)
Frame = +2
Query: 344 AAQYGHYSTAEVLLRAGVSRDARTKVDRTPLHMAAADGHAHIVELLVRNGADVNAKDMLK 523
AA+ G+ L+ G+ + + LH+AA +GH +V+ L+ G+ V++
Sbjct: 38 AARAGNLDKVVEYLKGGIDINTCNQNGLNALHLAAKEGHVGLVQELLGRGSAVDSATKKG 97
Query: 524 MTALHWATEHHHRDVVELLIKYGADVHAFSKFDKSAFDIALEKNNAEILVILQEAMQNQV 703
TALH A+ +VV++L+K GA+++A S+ + +A ++N+ +++ L E NQ
Sbjct: 98 NTALHIASLAGQAEVVKVLVKEGANINAQSQNGFTPLYMAAQENHIDVVKYLLENGANQS 157
Query: 704 NANPERANSVTMA 742
A + + +A
Sbjct: 158 TATEDGFTPLAVA 170
Score = 52.4 bits (124), Expect = 7e-07
Identities = 42/157 (26%), Positives = 79/157 (50%), Gaps = 8/157 (5%)
Frame = +2
Query: 239 LLEAARKGQDDEVRTLMANGAPFTTDWLGTSPLHLAAQYGHYSTAEVLLRAGVSRDARTK 418
L A ++G + V L+ N T + LH+AA+ +A +LL+ + D ++K
Sbjct: 167 LAVALQQGHNQAVAILLEND---TKGKVRLPALHIAARKDDTKSAALLLQNDHNADVQSK 223
Query: 419 --VDRT------PLHMAAADGHAHIVELLVRNGADVNAKDMLKMTALHWATEHHHRDVVE 574
V+RT PLH+AA G+ ++ LL+ GA V+ +T LH A++ + ++V+
Sbjct: 224 MMVNRTTESGFTPLHIAAHYGNVNVATLLLNRGAAVDFTARNGITPLHVASKRGNTNMVK 283
Query: 575 LLIKYGADVHAFSKFDKSAFDIALEKNNAEILVILQE 685
LL+ G + A ++ + A + +++ +L E
Sbjct: 284 LLLDRGGQIDAKTRDGLTPLHCAARSGHDQVVELLLE 320
Score = 52.0 bits (123), Expect = 9e-07
Identities = 37/123 (30%), Positives = 59/123 (47%), Gaps = 3/123 (2%)
Frame = +2
Query: 248 AARKGQDDEVRTLMANGAPFTTDWL-GTSPLHLAAQYGHYSTAEVLLRAGVSRDARTKVD 424
A+ GQ + V+ L+ GA G +PL++AAQ H + LL G ++ T+
Sbjct: 104 ASLAGQAEVVKVLVKEGANINAQSQNGFTPLYMAAQENHIDVVKYLLENGANQSTATEDG 163
Query: 425 RTPLHMAAADGHAHIVELLVRNGADVNAKDMLKMTALHWATEHHHRDVVELLIK--YGAD 598
TPL +A GH V +L+ N + K +++ ALH A LL++ + AD
Sbjct: 164 FTPLAVALQQGHNQAVAILLEN----DTKGKVRLPALHIAARKDDTKSAALLLQNDHNAD 219
Query: 599 VHA 607
V +
Sbjct: 220 VQS 222
Database: RefSeq49_BP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 17,681,374
Number of sequences in database: 33,088
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33088
Number of Hits to DB: 42,630,032
Number of extensions: 1201628
Number of successful extensions: 5324
Number of sequences better than 1.0e-05: 177
Number of HSP's gapped: 4622
Number of HSP's successfully gapped: 623
Length of query: 345
Length of database: 17,681,374
Length adjustment: 103
Effective length of query: 242
Effective length of database: 14,273,310
Effective search space: 3454141020
Effective search space used: 3454141020
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)
Search to RefSeqSP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-012619
(1035 letters)
Database: RefSeq49_SP.fasta
24,897 sequences; 11,343,932 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_003353409.1| PREDICTED: GA-binding protein subunit beta-1... 374 e-104
Alignment gi|XP_001928253.3| PREDICTED: GA-binding protein subunit beta-1... 374 e-104
Alignment gi|XP_003353408.1| PREDICTED: GA-binding protein subunit beta-1... 372 e-103
Alignment gi|XP_003353407.1| PREDICTED: GA-binding protein subunit beta-1... 372 e-103
Alignment gi|XP_003355240.1| PREDICTED: protein prune homolog [Sus scrofa]. 314 4e-86
Alignment gi|XP_003353416.1| PREDICTED: GA-binding protein subunit beta-1... 238 5e-63
Alignment gi|XP_003355241.1| PREDICTED: GA-binding protein subunit beta-2... 143 2e-34
Alignment gi|XP_003125819.2| PREDICTED: GA-binding protein subunit beta-2... 138 4e-33
Alignment gi|XP_001926591.2| PREDICTED: LOW QUALITY PROTEIN: tankyrase-2 ... 95 6e-20
Alignment gi|XP_003134273.2| PREDICTED: ankyrin-1-like, partial [Sus scro... 94 2e-19
>ref|XP_003353409.1| PREDICTED: GA-binding protein subunit beta-1 [Sus scrofa].
Length = 360
Score = 374 bits (961), Expect = e-104
Identities = 203/316 (64%), Positives = 235/316 (74%), Gaps = 42/316 (13%)
Frame = +2
Query: 212 MSLVDLGKRLLEAARKGQDDEVRTLMANGAPFTTDWLGTSPLHLAAQYGHYSTAEVLLRA 391
MSLVDLGK+LLEAAR GQDDEVR LMANGAPFTTDWLGTSPLHLAAQYGHYST EVLLRA
Sbjct: 1 MSLVDLGKKLLEAARAGQDDEVRILMANGAPFTTDWLGTSPLHLAAQYGHYSTTEVLLRA 60
Query: 392 GVSRDARTKVDRTPLHMAAADGHAHIVELLVRNGADVNAKDMLKMTALHWATEHHHRDVV 571
GVSRDARTKVDRTPLHMAA++GHA IVE+L+++GADVNAKDMLKMTALHWATEH+H++VV
Sbjct: 61 GVSRDARTKVDRTPLHMAASEGHASIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVV 120
Query: 572 ELLIKYGADVHAFSKFDKSAFDIALEKNNAEILVILQEAMQNQVNANPERANSVTM--AT 745
ELLIKYGADVH SKF K+AFDI+++ N ++ ILQ AMQNQ+N NPE ++VT+ AT
Sbjct: 121 ELLIKYGADVHTQSKFCKTAFDISIDNGNEDLAEILQIAMQNQINTNPESPDTVTIHAAT 180
Query: 746 P-FIFTSGEVVNLASLVNSANTKTTS----------GNS--------------------- 829
P FI G VVNL LV+S N+ + GNS
Sbjct: 181 PQFIIGPGGVVNLTGLVSSENSSKATDETGVSAVQFGNSSTSVLATLAALAEASAPLSNS 240
Query: 830 --------EEIIDGNSVDSSIQQVVGSGGQRVITIVTDGVPLGNIQAAVPTGGIGQPFIV 985
EE++ SVD +IQQVV SGGQ+VITIVTDG+ LGN+ ++PT GIGQP IV
Sbjct: 241 SETPVVATEEVVTAESVDGAIQQVVSSGGQQVITIVTDGIQLGNLH-SIPTSGIGQPIIV 299
Query: 986 TMQDGQQVLTVPAGQV 1033
TM DGQQVLTVPA +
Sbjct: 300 TMPDGQQVLTVPATDI 315
>ref|XP_001928253.3| PREDICTED: GA-binding protein subunit beta-1 isoform 2 [Sus scrofa].
Length = 395
Score = 374 bits (961), Expect = e-104
Identities = 203/316 (64%), Positives = 235/316 (74%), Gaps = 42/316 (13%)
Frame = +2
Query: 212 MSLVDLGKRLLEAARKGQDDEVRTLMANGAPFTTDWLGTSPLHLAAQYGHYSTAEVLLRA 391
MSLVDLGK+LLEAAR GQDDEVR LMANGAPFTTDWLGTSPLHLAAQYGHYST EVLLRA
Sbjct: 1 MSLVDLGKKLLEAARAGQDDEVRILMANGAPFTTDWLGTSPLHLAAQYGHYSTTEVLLRA 60
Query: 392 GVSRDARTKVDRTPLHMAAADGHAHIVELLVRNGADVNAKDMLKMTALHWATEHHHRDVV 571
GVSRDARTKVDRTPLHMAA++GHA IVE+L+++GADVNAKDMLKMTALHWATEH+H++VV
Sbjct: 61 GVSRDARTKVDRTPLHMAASEGHASIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVV 120
Query: 572 ELLIKYGADVHAFSKFDKSAFDIALEKNNAEILVILQEAMQNQVNANPERANSVTM--AT 745
ELLIKYGADVH SKF K+AFDI+++ N ++ ILQ AMQNQ+N NPE ++VT+ AT
Sbjct: 121 ELLIKYGADVHTQSKFCKTAFDISIDNGNEDLAEILQIAMQNQINTNPESPDTVTIHAAT 180
Query: 746 P-FIFTSGEVVNLASLVNSANTKTTS----------GNS--------------------- 829
P FI G VVNL LV+S N+ + GNS
Sbjct: 181 PQFIIGPGGVVNLTGLVSSENSSKATDETGVSAVQFGNSSTSVLATLAALAEASAPLSNS 240
Query: 830 --------EEIIDGNSVDSSIQQVVGSGGQRVITIVTDGVPLGNIQAAVPTGGIGQPFIV 985
EE++ SVD +IQQVV SGGQ+VITIVTDG+ LGN+ ++PT GIGQP IV
Sbjct: 241 SETPVVATEEVVTAESVDGAIQQVVSSGGQQVITIVTDGIQLGNLH-SIPTSGIGQPIIV 299
Query: 986 TMQDGQQVLTVPAGQV 1033
TM DGQQVLTVPA +
Sbjct: 300 TMPDGQQVLTVPATDI 315
>ref|XP_003353408.1| PREDICTED: GA-binding protein subunit beta-1 [Sus scrofa].
Length = 348
Score = 372 bits (956), Expect = e-103
Identities = 201/306 (65%), Positives = 233/306 (76%), Gaps = 32/306 (10%)
Frame = +2
Query: 212 MSLVDLGKRLLEAARKGQDDEVRTLMANGAPFTTDWLGTSPLHLAAQYGHYSTAEVLLRA 391
MSLVDLGK+LLEAAR GQDDEVR LMANGAPFTTDWLGTSPLHLAAQYGHYST EVLLRA
Sbjct: 1 MSLVDLGKKLLEAARAGQDDEVRILMANGAPFTTDWLGTSPLHLAAQYGHYSTTEVLLRA 60
Query: 392 GVSRDARTKVDRTPLHMAAADGHAHIVELLVRNGADVNAKDMLKMTALHWATEHHHRDVV 571
GVSRDARTKVDRTPLHMAA++GHA IVE+L+++GADVNAKDMLKMTALHWATEH+H++VV
Sbjct: 61 GVSRDARTKVDRTPLHMAASEGHASIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVV 120
Query: 572 ELLIKYGADVHAFSKFDKSAFDIALEKNNAEILVILQEAMQNQVNANPERANSVTM--AT 745
ELLIKYGADVH SKF K+AFDI+++ N ++ ILQ AMQNQ+N NPE ++VT+ AT
Sbjct: 121 ELLIKYGADVHTQSKFCKTAFDISIDNGNEDLAEILQIAMQNQINTNPESPDTVTIHAAT 180
Query: 746 P-FIFTSGEVVNL-----------------------------ASLVNSANTKTTSGNSEE 835
P FI G VVNL A L NS+ T + +EE
Sbjct: 181 PQFIIGPGGVVNLTDETGVSAVQFGNSSTSVLATLAALAEASAPLSNSSETPVVA--TEE 238
Query: 836 IIDGNSVDSSIQQVVGSGGQRVITIVTDGVPLGNIQAAVPTGGIGQPFIVTMQDGQQVLT 1015
++ SVD +IQQVV SGGQ+VITIVTDG+ LGN+ ++PT GIGQP IVTM DGQQVLT
Sbjct: 239 VVTAESVDGAIQQVVSSGGQQVITIVTDGIQLGNLH-SIPTSGIGQPIIVTMPDGQQVLT 297
Query: 1016 VPAGQV 1033
VPA +
Sbjct: 298 VPATDI 303
>ref|XP_003353407.1| PREDICTED: GA-binding protein subunit beta-1 [Sus scrofa].
Length = 383
Score = 372 bits (956), Expect = e-103
Identities = 201/306 (65%), Positives = 233/306 (76%), Gaps = 32/306 (10%)
Frame = +2
Query: 212 MSLVDLGKRLLEAARKGQDDEVRTLMANGAPFTTDWLGTSPLHLAAQYGHYSTAEVLLRA 391
MSLVDLGK+LLEAAR GQDDEVR LMANGAPFTTDWLGTSPLHLAAQYGHYST EVLLRA
Sbjct: 1 MSLVDLGKKLLEAARAGQDDEVRILMANGAPFTTDWLGTSPLHLAAQYGHYSTTEVLLRA 60
Query: 392 GVSRDARTKVDRTPLHMAAADGHAHIVELLVRNGADVNAKDMLKMTALHWATEHHHRDVV 571
GVSRDARTKVDRTPLHMAA++GHA IVE+L+++GADVNAKDMLKMTALHWATEH+H++VV
Sbjct: 61 GVSRDARTKVDRTPLHMAASEGHASIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVV 120
Query: 572 ELLIKYGADVHAFSKFDKSAFDIALEKNNAEILVILQEAMQNQVNANPERANSVTM--AT 745
ELLIKYGADVH SKF K+AFDI+++ N ++ ILQ AMQNQ+N NPE ++VT+ AT
Sbjct: 121 ELLIKYGADVHTQSKFCKTAFDISIDNGNEDLAEILQIAMQNQINTNPESPDTVTIHAAT 180
Query: 746 P-FIFTSGEVVNL-----------------------------ASLVNSANTKTTSGNSEE 835
P FI G VVNL A L NS+ T + +EE
Sbjct: 181 PQFIIGPGGVVNLTDETGVSAVQFGNSSTSVLATLAALAEASAPLSNSSETPVVA--TEE 238
Query: 836 IIDGNSVDSSIQQVVGSGGQRVITIVTDGVPLGNIQAAVPTGGIGQPFIVTMQDGQQVLT 1015
++ SVD +IQQVV SGGQ+VITIVTDG+ LGN+ ++PT GIGQP IVTM DGQQVLT
Sbjct: 239 VVTAESVDGAIQQVVSSGGQQVITIVTDGIQLGNLH-SIPTSGIGQPIIVTMPDGQQVLT 297
Query: 1016 VPAGQV 1033
VPA +
Sbjct: 298 VPATDI 303
>ref|XP_003355240.1| PREDICTED: protein prune homolog [Sus scrofa].
Length = 392
Score = 314 bits (805), Expect = 4e-86
Identities = 157/157 (100%), Positives = 157/157 (100%)
Frame = +2
Query: 212 MSLVDLGKRLLEAARKGQDDEVRTLMANGAPFTTDWLGTSPLHLAAQYGHYSTAEVLLRA 391
MSLVDLGKRLLEAARKGQDDEVRTLMANGAPFTTDWLGTSPLHLAAQYGHYSTAEVLLRA
Sbjct: 1 MSLVDLGKRLLEAARKGQDDEVRTLMANGAPFTTDWLGTSPLHLAAQYGHYSTAEVLLRA 60
Query: 392 GVSRDARTKVDRTPLHMAAADGHAHIVELLVRNGADVNAKDMLKMTALHWATEHHHRDVV 571
GVSRDARTKVDRTPLHMAAADGHAHIVELLVRNGADVNAKDMLKMTALHWATEHHHRDVV
Sbjct: 61 GVSRDARTKVDRTPLHMAAADGHAHIVELLVRNGADVNAKDMLKMTALHWATEHHHRDVV 120
Query: 572 ELLIKYGADVHAFSKFDKSAFDIALEKNNAEILVILQ 682
ELLIKYGADVHAFSKFDKSAFDIALEKNNAEILVILQ
Sbjct: 121 ELLIKYGADVHAFSKFDKSAFDIALEKNNAEILVILQ 157
>ref|XP_003353416.1| PREDICTED: GA-binding protein subunit beta-1-like [Sus scrofa].
Length = 287
Score = 238 bits (606), Expect = 5e-63
Identities = 130/215 (60%), Positives = 160/215 (74%), Gaps = 14/215 (6%)
Frame = +2
Query: 320 LGTSPLHLAAQYGHYSTAEVLLRAGVSRDARTKVDRTPLHMAAADGHAHIVELLVRNGAD 499
LGTSPLHLAAQYGHYST EVLLRAGVSRDARTKVDRTPLHMAA++GHA IVE+L+++GAD
Sbjct: 35 LGTSPLHLAAQYGHYSTTEVLLRAGVSRDARTKVDRTPLHMAASEGHASIVEVLLKHGAD 94
Query: 500 VNAKDMLKMTALHWATEHHHRDVVELLIKYGADVHAFSKFDKSAFDIALEKNNAEILVIL 679
VNAKDMLKMTALHWATEH+H++VVELLIKYGADVH SKF K+AFDI+++ N ++ IL
Sbjct: 95 VNAKDMLKMTALHWATEHNHQEVVELLIKYGADVHTQSKFCKTAFDISIDNGNEDLAEIL 154
Query: 680 QEAMQNQVNANPERANSVTM--ATP-FIFTSGEVVNLASLVNSAN-TKTTSGNSEEIID- 844
Q AMQNQ+N NPE ++VT+ ATP FI G VVNL LV+S N +K T +
Sbjct: 155 QIAMQNQINTNPESPDTVTIHAATPQFIIGPGGVVNLTGLVSSENSSKATDETGVSAVQF 214
Query: 845 GNSVDSSIQQV---------VGSGGQRVITIVTDG 922
GNS S + + + + + +T+V +G
Sbjct: 215 GNSSTSVLATLAALAEASAPLSNSSETPVTLVEEG 249
>ref|XP_003355241.1| PREDICTED: GA-binding protein subunit beta-2-like, partial [Sus
scrofa].
Length = 243
Score = 143 bits (360), Expect = 2e-34
Identities = 76/96 (79%), Positives = 83/96 (86%), Gaps = 4/96 (4%)
Frame = +2
Query: 758 TSGEVVNLASLVNSANTKTTS----GNSEEIIDGNSVDSSIQQVVGSGGQRVITIVTDGV 925
T+ + LA+L ++ ++S GNSEEIIDGNSVDSSIQQVVGSGGQRVITIVTDGV
Sbjct: 14 TTSVLATLAALAEASAPLSSSHRATGNSEEIIDGNSVDSSIQQVVGSGGQRVITIVTDGV 73
Query: 926 PLGNIQAAVPTGGIGQPFIVTMQDGQQVLTVPAGQV 1033
PLGNIQAAVPTGGIGQPFIVTMQDGQQVLTVPAGQV
Sbjct: 74 PLGNIQAAVPTGGIGQPFIVTMQDGQQVLTVPAGQV 109
>ref|XP_003125819.2| PREDICTED: GA-binding protein subunit beta-2 isoform 3 [Sus scrofa].
Length = 357
Score = 138 bits (348), Expect = 4e-33
Identities = 70/70 (100%), Positives = 70/70 (100%)
Frame = +2
Query: 824 NSEEIIDGNSVDSSIQQVVGSGGQRVITIVTDGVPLGNIQAAVPTGGIGQPFIVTMQDGQ 1003
NSEEIIDGNSVDSSIQQVVGSGGQRVITIVTDGVPLGNIQAAVPTGGIGQPFIVTMQDGQ
Sbjct: 154 NSEEIIDGNSVDSSIQQVVGSGGQRVITIVTDGVPLGNIQAAVPTGGIGQPFIVTMQDGQ 213
Query: 1004 QVLTVPAGQV 1033
QVLTVPAGQV
Sbjct: 214 QVLTVPAGQV 223
>ref|XP_001926591.2| PREDICTED: LOW QUALITY PROTEIN: tankyrase-2 [Sus scrofa].
Length = 1338
Score = 95.1 bits (235), Expect = 6e-20
Identities = 54/137 (39%), Positives = 79/137 (57%), Gaps = 2/137 (1%)
Frame = +2
Query: 239 LLEAARKGQDDEVRTLMA--NGAPFTTDWLGTSPLHLAAQYGHYSTAEVLLRAGVSRDAR 412
LLE+AR G ++++ L+ N +D ++PLHLAA Y ++LL+ G A+
Sbjct: 353 LLESARSGNEEKMMALLTPLNVNCHASDGRKSTPLHLAAGYNRVKIVQLLLQHGADVHAK 412
Query: 413 TKVDRTPLHMAAADGHAHIVELLVRNGADVNAKDMLKMTALHWATEHHHRDVVELLIKYG 592
K D PLH A + GH + ELLV++GA VNA D+ + T LH A + +V LL+ YG
Sbjct: 413 DKGDLVPLHNACSYGHYEVTELLVKHGACVNAMDLWQFTPLHEAASKNRVEVCSLLLSYG 472
Query: 593 ADVHAFSKFDKSAFDIA 643
AD + +KSA D+A
Sbjct: 473 ADPTLLNCHNKSAIDLA 489
Score = 84.3 bits (207), Expect = 1e-16
Identities = 69/240 (28%), Positives = 112/240 (46%), Gaps = 22/240 (9%)
Frame = +2
Query: 239 LLEAARKGQDDEVRTLMANGAPFTTDWLG--TSPLHLAAQYGHYSTAEVLLRAGVSRDAR 412
LL+AA+KG V+ L + D G ++PLHLAA Y + AE LL+ G +A+
Sbjct: 821 LLDAAKKGCLARVKKLSSPDNVNCRDTQGRHSTPLHLAAGYNNLEVAEYLLQHGADVNAQ 880
Query: 413 TKVDRTPLHMAAADGHAHIVELLVRNGADVNAKDMLKMTALHWATEHHHRDVVELLIKYG 592
K PLH AA+ GH + LL++ A VNA D T LH A + + LL+ +G
Sbjct: 881 DKGGLIPLHNAASYGHVDVAALLIKYNACVNATDKWAFTPLHEAAQKGRTQLCALLLAHG 940
Query: 593 ADVHAFSKFDKSAFDIALEKNNAEILVILQE--------------------AMQNQVNAN 712
AD ++ ++ D+ + + +L A + +++
Sbjct: 941 ADPTLKNQEGQTPLDLVSADDVSALLTAAMPPSALPSCYKPQVLNGVRSPGATADALSSG 1000
Query: 713 PERANSVTMATPFIFTSGEVVNLASLVNSANTKTTSGNSEEIIDGNSVDSSIQQVVGSGG 892
P +S++ A+ SG L+S+V+S+ T+ S ++ + G VD SI Q V + G
Sbjct: 1001 PSSPSSLSAASSLDNLSGSFSELSSVVSSSGTEGASSLEKKEVPG--VDFSITQFVRNLG 1058
Score = 80.9 bits (198), Expect = 1e-15
Identities = 50/139 (35%), Positives = 74/139 (53%), Gaps = 2/139 (1%)
Frame = +2
Query: 233 KRLLEAARKGQDDEVRTLMANGAPFTTDWLG--TSPLHLAAQYGHYSTAEVLLRAGVSRD 406
+ L EA R G + V+ L+ + D G ++PLH AA +G E LL+ G +
Sbjct: 198 RELFEACRNGDVERVKRLVTPEKVNSRDTAGRKSTPLHFAAGFGRKDVVEYLLQNGANVQ 257
Query: 407 ARTKVDRTPLHMAAADGHAHIVELLVRNGADVNAKDMLKMTALHWATEHHHRDVVELLIK 586
AR PLH A + GHA +V LL+R+GAD NA+D T LH A DV +L++
Sbjct: 258 ARDDGGLIPLHNACSFGHAEVVNLLLRHGADPNARDNWNYTPLHEAAIKGKIDVCIVLLQ 317
Query: 587 YGADVHAFSKFDKSAFDIA 643
+GA+ + ++A D+A
Sbjct: 318 HGAEPTIRNTDGRTALDLA 336
Score = 80.9 bits (198), Expect = 1e-15
Identities = 48/124 (38%), Positives = 69/124 (55%), Gaps = 2/124 (1%)
Frame = +2
Query: 233 KRLLEAARKGQDDEVRTLMANGAPFTTDWLG--TSPLHLAAQYGHYSTAEVLLRAGVSRD 406
++LLEAA+ G + V+ L + D G ++PLH AA Y S E LL+ G
Sbjct: 666 RQLLEAAKAGDVETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGADVH 725
Query: 407 ARTKVDRTPLHMAAADGHAHIVELLVRNGADVNAKDMLKMTALHWATEHHHRDVVELLIK 586
A+ K PLH A + GH + ELLV++GA VN D+ K T LH A ++ +LL++
Sbjct: 726 AKDKGGLVPLHNACSYGHYEVAELLVKHGAVVNVADLWKFTPLHEAAAKGKYEICKLLLQ 785
Query: 587 YGAD 598
+GAD
Sbjct: 786 HGAD 789
Score = 69.3 bits (168), Expect = 3e-12
Identities = 57/169 (33%), Positives = 80/169 (47%), Gaps = 22/169 (13%)
Frame = +2
Query: 239 LLEAARKGQDDEVRTLMANGA-PFTTDWLGTSPLHLA------AQYGHYSTAEVLLRA-- 391
L EAA KG+ D L+ +GA P + G + L LA G Y E+L A
Sbjct: 300 LHEAAIKGKIDVCIVLLQHGAEPTIRNTDGRTALDLADPSAKAVLTGEYKKDELLESARS 359
Query: 392 -------------GVSRDARTKVDRTPLHMAAADGHAHIVELLVRNGADVNAKDMLKMTA 532
V+ A TPLH+AA IV+LL+++GADV+AKD +
Sbjct: 360 GNEEKMMALLTPLNVNCHASDGRKSTPLHLAAGYNRVKIVQLLLQHGADVHAKDKGDLVP 419
Query: 533 LHWATEHHHRDVVELLIKYGADVHAFSKFDKSAFDIALEKNNAEILVIL 679
LH A + H +V ELL+K+GA V+A + + A KN E+ +L
Sbjct: 420 LHNACSYGHYEVTELLVKHGACVNAMDLWQFTPLHEAASKNRVEVCSLL 468
Score = 68.2 bits (165), Expect = 7e-12
Identities = 52/158 (32%), Positives = 76/158 (48%), Gaps = 4/158 (2%)
Frame = +2
Query: 230 GKRLLEAARKGQDDEVRT-LMANGAPFTTDWLGTSPLHLAAQYGH---YSTAEVLLRAGV 397
G LL+AAR+ ++ L F + LH AA + E+LLR G
Sbjct: 504 GHSLLQAAREADVTRIKKHLSLEMVNFKHPQTHETALHCAAASPYPKRKQICELLLRKGA 563
Query: 398 SRDARTKVDRTPLHMAAADGHAHIVELLVRNGADVNAKDMLKMTALHWATEHHHRDVVEL 577
+ + +TK TPLH+A+ H +VE++V++ A VNA D L T+LH A H L
Sbjct: 564 NINEKTKEFLTPLHVASEKAHNDVVEVVVKHEAKVNALDNLGQTSLHRAAHCGHLQTCRL 623
Query: 578 LIKYGADVHAFSKFDKSAFDIALEKNNAEILVILQEAM 691
L+ YG D + S F AL+ N + +LQE +
Sbjct: 624 LLSYGCDPNIIS---LQGF-TALQMGNENVQQLLQEGI 657
Score = 62.0 bits (149), Expect = 5e-10
Identities = 34/107 (31%), Positives = 57/107 (53%)
Frame = +2
Query: 428 TPLHMAAADGHAHIVELLVRNGADVNAKDMLKMTALHWATEHHHRDVVELLIKYGADVHA 607
TPLH AA G +VE L++NGA+V A+D + LH A H +VV LL+++GAD +A
Sbjct: 232 TPLHFAAGFGRKDVVEYLLQNGANVQARDDGGLIPLHNACSFGHAEVVNLLLRHGADPNA 291
Query: 608 FSKFDKSAFDIALEKNNAEILVILQEAMQNQVNANPERANSVTMATP 748
++ + A K ++ ++L + N + ++ +A P
Sbjct: 292 RDNWNYTPLHEAAIKGKIDVCIVLLQHGAEPTIRNTDGRTALDLADP 338
Score = 60.8 bits (146), Expect = 1e-09
Identities = 49/156 (31%), Positives = 75/156 (48%), Gaps = 2/156 (1%)
Frame = +2
Query: 266 DDEVRTLMANGAPFTTDWLGTSPLHLAAQYGHYSTAEVL--LRAGVSRDARTKVDRTPLH 439
++ V+ L+ G P L AA+ G T + L +++ RD + TPLH
Sbjct: 646 NENVQQLLQEGIPLGNSEADRQLLE-AAKAGDVETVKKLCTVQSVNCRDIEGR-QSTPLH 703
Query: 440 MAAADGHAHIVELLVRNGADVNAKDMLKMTALHWATEHHHRDVVELLIKYGADVHAFSKF 619
AA +VE L+++GADV+AKD + LH A + H +V ELL+K+GA V+ +
Sbjct: 704 FAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNACSYGHYEVAELLVKHGAVVNVADLW 763
Query: 620 DKSAFDIALEKNNAEILVILQEAMQNQVNANPERAN 727
+ A K EI +L Q A+P + N
Sbjct: 764 KFTPLHEAAAKGKYEICKLLL-----QHGADPTKKN 794
>ref|XP_003134273.2| PREDICTED: ankyrin-1-like, partial [Sus scrofa].
Length = 1419
Score = 93.6 bits (231), Expect = 2e-19
Identities = 60/164 (36%), Positives = 85/164 (51%), Gaps = 1/164 (0%)
Frame = +2
Query: 248 AARKGQDDEVRTLMANGA-PFTTDWLGTSPLHLAAQYGHYSTAEVLLRAGVSRDARTKVD 424
AAR G + V+ L+ N A P G +PLH+AA+ GH TA LL G S+ TK
Sbjct: 471 AARIGHTNMVKLLLENNANPNLATTAGHTPLHIAAREGHVETALALLEKGASQACMTKKG 530
Query: 425 RTPLHMAAADGHAHIVELLVRNGADVNAKDMLKMTALHWATEHHHRDVVELLIKYGADVH 604
TPLH+AA G + ELL+ + A NA +T LH A H+H D+V+LL+ G H
Sbjct: 531 FTPLHVAAKYGKVRVAELLLEHDAHPNAAGKNGLTPLHVAVHHNHLDIVKLLLPRGGSPH 590
Query: 605 AFSKFDKSAFDIALEKNNAEILVILQEAMQNQVNANPERANSVT 736
+ + + IA ++N E + + +Q +AN E VT
Sbjct: 591 SPAWNGYTPLHIAAKQNQME---VARSLLQYGGSANAESVQGVT 631
Score = 88.2 bits (217), Expect = 7e-18
Identities = 52/133 (39%), Positives = 79/133 (59%), Gaps = 1/133 (0%)
Frame = +2
Query: 248 AARKGQDDEVRTLMANGAPFTT-DWLGTSPLHLAAQYGHYSTAEVLLRAGVSRDARTKVD 424
AA++G + V L++ A + G +PLHL AQ GH A+VL++ GV+ DA T++
Sbjct: 636 AAQEGHAEMVALLLSKQANGNLGNKSGLTPLHLVAQEGHVPVADVLIKHGVTVDATTRMG 695
Query: 425 RTPLHMAAADGHAHIVELLVRNGADVNAKDMLKMTALHWATEHHHRDVVELLIKYGADVH 604
TPLH+A+ G+ +V+ L+++ ADVNAK L + LH A + H D+V LL+K GA +
Sbjct: 696 YTPLHVASHYGNIKLVKFLLQHQADVNAKTKLGYSPLHQAAQQGHTDIVTLLLKNGASPN 755
Query: 605 AFSKFDKSAFDIA 643
S + IA
Sbjct: 756 EVSSNGTTPLAIA 768
Score = 85.1 bits (209), Expect = 6e-17
Identities = 49/158 (31%), Positives = 90/158 (56%), Gaps = 3/158 (1%)
Frame = +2
Query: 248 AARKGQDDEVRTLMANGAPFTTDWL-GTSPLHLAAQYGHYSTAEVLLRAGVSRDARTKVD 424
AA++ Q + R+L+ G + + G +PLHLAAQ GH +LL + + K
Sbjct: 603 AAKQNQMEVARSLLQYGGSANAESVQGVTPLHLAAQEGHAEMVALLLSKQANGNLGNKSG 662
Query: 425 RTPLHMAAADGHAHIVELLVRNGADVNAKDMLKMTALHWATEHHHRDVVELLIKYGADVH 604
TPLH+ A +GH + ++L+++G V+A + T LH A+ + + +V+ L+++ ADV+
Sbjct: 663 LTPLHLVAQEGHVPVADVLIKHGVTVDATTRMGYTPLHVASHYGNIKLVKFLLQHQADVN 722
Query: 605 AFSKFDKSAFDIALEKNNAEILVILQE--AMQNQVNAN 712
A +K S A ++ + +I+ +L + A N+V++N
Sbjct: 723 AKTKLGYSPLHQAAQQGHTDIVTLLLKNGASPNEVSSN 760
Score = 82.0 bits (201), Expect = 5e-16
Identities = 47/143 (32%), Positives = 76/143 (53%)
Frame = +2
Query: 284 LMANGAPFTTDWLGTSPLHLAAQYGHYSTAEVLLRAGVSRDARTKVDRTPLHMAAADGHA 463
L G+P + W G +PLH+AA+ A LL+ G S +A + TPLH+AA +GHA
Sbjct: 583 LPRGGSPHSPAWNGYTPLHIAAKQNQMEVARSLLQYGGSANAESVQGVTPLHLAAQEGHA 642
Query: 464 HIVELLVRNGADVNAKDMLKMTALHWATEHHHRDVVELLIKYGADVHAFSKFDKSAFDIA 643
+V LL+ A+ N + +T LH + H V ++LIK+G V A ++ + +A
Sbjct: 643 EMVALLLSKQANGNLGNKSGLTPLHLVAQEGHVPVADVLIKHGVTVDATTRMGYTPLHVA 702
Query: 644 LEKNNAEILVILQEAMQNQVNAN 712
N +++ L +Q+Q + N
Sbjct: 703 SHYGNIKLVKFL---LQHQADVN 722
Score = 77.4 bits (189), Expect = 1e-14
Identities = 53/162 (32%), Positives = 82/162 (50%), Gaps = 1/162 (0%)
Frame = +2
Query: 248 AARKGQDDEVRTLMANGA-PFTTDWLGTSPLHLAAQYGHYSTAEVLLRAGVSRDARTKVD 424
AA G + L+ GA P + G +PLH+A + H E+LL+ G S DA T+
Sbjct: 339 AAHCGHHRVAKVLLDKGAKPNSRALNGFTPLHIACKKNHIRVMELLLKTGASIDAVTESG 398
Query: 425 RTPLHMAAADGHAHIVELLVRNGADVNAKDMLKMTALHWATEHHHRDVVELLIKYGADVH 604
TPLH+A+ GH IV+ L++ A N ++ T LH A H +V + L++ A V+
Sbjct: 399 LTPLHVASFMGHLPIVKNLLQRDASPNVSNVKVETPLHMAARAGHTEVAKYLLQNKAKVN 458
Query: 605 AFSKFDKSAFDIALEKNNAEILVILQEAMQNQVNANPERANS 730
A +K D++ A + ++ +L E NANP A +
Sbjct: 459 AKAKDDQTPLHCAARIGHTNMVKLLLEN-----NANPNLATT 495
Score = 76.3 bits (186), Expect = 3e-14
Identities = 48/157 (30%), Positives = 78/157 (49%), Gaps = 1/157 (0%)
Frame = +2
Query: 212 MSLVDLGKRLLEAARKGQDDEVRTLMANGAPFTT-DWLGTSPLHLAAQYGHYSTAEVLLR 388
M D L AAR G D+ + NG T + G + LHLA++ GH LL
Sbjct: 1 MCWADAATSFLRAARSGNLDKALDHLRNGVDINTCNQNGLNGLHLASKEGHVKMVVELLH 60
Query: 389 AGVSRDARTKVDRTPLHMAAADGHAHIVELLVRNGADVNAKDMLKMTALHWATEHHHRDV 568
+ + TK T LH+AA G +V LV GA+VNA+ T L+ A + +H +V
Sbjct: 61 KEIILETTTKKGNTALHIAALAGQDEVVRELVNYGANVNAQSQKGFTPLYMAAQENHLEV 120
Query: 569 VELLIKYGADVHAFSKFDKSAFDIALEKNNAEILVIL 679
V+ L++ GA+ + ++ + +AL++ + ++ L
Sbjct: 121 VKFLLENGANQNVATEDGFTPLAVALQQGHENVVAHL 157
Score = 75.5 bits (184), Expect = 5e-14
Identities = 36/93 (38%), Positives = 57/93 (61%)
Frame = +2
Query: 323 GTSPLHLAAQYGHYSTAEVLLRAGVSRDARTKVDRTPLHMAAADGHAHIVELLVRNGADV 502
G +PLH+A++ G+ +LL G + RTK + TPLH AA +GH I E+L+ +GA +
Sbjct: 233 GITPLHIASRRGNVIMVRLLLDRGAQIETRTKDELTPLHCAARNGHLRISEILLDHGAPI 292
Query: 503 NAKDMLKMTALHWATEHHHRDVVELLIKYGADV 601
AK ++ +H A + H D V LL++Y A++
Sbjct: 293 QAKTKNGLSPIHMAAQGDHLDCVRLLLQYNAEI 325
Score = 74.3 bits (181), Expect = 1e-13
Identities = 53/168 (31%), Positives = 84/168 (50%), Gaps = 1/168 (0%)
Frame = +2
Query: 248 AARKGQDDEVRTLMANGAPFTTDWL-GTSPLHLAAQYGHYSTAEVLLRAGVSRDARTKVD 424
AAR G L+ +GAP G SP+H+AAQ H +LL+ D T
Sbjct: 273 AARNGHLRISEILLDHGAPIQAKTKNGLSPIHMAAQGDHLDCVRLLLQYNAEIDDITLDH 332
Query: 425 RTPLHMAAADGHAHIVELLVRNGADVNAKDMLKMTALHWATEHHHRDVVELLIKYGADVH 604
TPLH+AA GH + ++L+ GA N++ + T LH A + +H V+ELL+K GA +
Sbjct: 333 LTPLHVAAHCGHHRVAKVLLDKGAKPNSRALNGFTPLHIACKKNHIRVMELLLKTGASID 392
Query: 605 AFSKFDKSAFDIALEKNNAEILVILQEAMQNQVNANPERANSVTMATP 748
A ++ + +A + L I++ +Q + N ++V + TP
Sbjct: 393 AVTESGLTPLHVASFMGH---LPIVKNLLQRDASPN---VSNVKVETP 434
Score = 73.9 bits (180), Expect = 1e-13
Identities = 50/164 (30%), Positives = 80/164 (48%), Gaps = 1/164 (0%)
Frame = +2
Query: 248 AARKGQDDEVRTLMANGAPFTT-DWLGTSPLHLAAQYGHYSTAEVLLRAGVSRDARTKVD 424
AAR+G + L+ GA G +PLH+AA+YG AE+LL +A K
Sbjct: 504 AAREGHVETALALLEKGASQACMTKKGFTPLHVAAKYGKVRVAELLLEHDAHPNAAGKNG 563
Query: 425 RTPLHMAAADGHAHIVELLVRNGADVNAKDMLKMTALHWATEHHHRDVVELLIKYGADVH 604
TPLH+A H IV+LL+ G ++ T LH A + + +V L++YG +
Sbjct: 564 LTPLHVAVHHNHLDIVKLLLPRGGSPHSPAWNGYTPLHIAAKQNQMEVARSLLQYGGSAN 623
Query: 605 AFSKFDKSAFDIALEKNNAEILVILQEAMQNQVNANPERANSVT 736
A S + +A ++ +AE++ +L + Q N N + +T
Sbjct: 624 AESVQGVTPLHLAAQEGHAEMVALL---LSKQANGNLGNKSGLT 664
Score = 72.8 bits (177), Expect = 3e-13
Identities = 47/145 (32%), Positives = 76/145 (52%), Gaps = 1/145 (0%)
Frame = +2
Query: 248 AARKGQDDEVRTLMANGAPFTTDWLGT-SPLHLAAQYGHYSTAEVLLRAGVSRDARTKVD 424
A+R+G VR L+ GA T +PLH AA+ GH +E+LL G A+TK
Sbjct: 240 ASRRGNVIMVRLLLDRGAQIETRTKDELTPLHCAARNGHLRISEILLDHGAPIQAKTKNG 299
Query: 425 RTPLHMAAADGHAHIVELLVRNGADVNAKDMLKMTALHWATEHHHRDVVELLIKYGADVH 604
+P+HMAA H V LL++ A+++ + +T LH A H V ++L+ GA +
Sbjct: 300 LSPIHMAAQGDHLDCVRLLLQYNAEIDDITLDHLTPLHVAAHCGHHRVAKVLLDKGAKPN 359
Query: 605 AFSKFDKSAFDIALEKNNAEILVIL 679
+ + + IA +KN+ ++ +L
Sbjct: 360 SRALNGFTPLHIACKKNHIRVMELL 384
Score = 70.5 bits (171), Expect = 1e-12
Identities = 42/143 (29%), Positives = 77/143 (53%), Gaps = 4/143 (2%)
Frame = +2
Query: 263 QDDEVRT----LMANGAPFTTDWLGTSPLHLAAQYGHYSTAEVLLRAGVSRDARTKVDRT 430
++D+ RT L + P G +PLH+AA Y + + A++LL G S + + T
Sbjct: 176 RNDDTRTAAVLLQNDPNPDVLSKTGFTPLHIAAHYENLNVAQLLLNRGASVNFTPQNGIT 235
Query: 431 PLHMAAADGHAHIVELLVRNGADVNAKDMLKMTALHWATEHHHRDVVELLIKYGADVHAF 610
PLH+A+ G+ +V LL+ GA + + ++T LH A + H + E+L+ +GA + A
Sbjct: 236 PLHIASRRGNVIMVRLLLDRGAQIETRTKDELTPLHCAARNGHLRISEILLDHGAPIQAK 295
Query: 611 SKFDKSAFDIALEKNNAEILVIL 679
+K S +A + ++ + + +L
Sbjct: 296 TKNGLSPIHMAAQGDHLDCVRLL 318
Score = 70.1 bits (170), Expect = 2e-12
Identities = 43/151 (28%), Positives = 74/151 (49%)
Frame = +2
Query: 284 LMANGAPFTTDWLGTSPLHLAAQYGHYSTAEVLLRAGVSRDARTKVDRTPLHMAAADGHA 463
L + +P ++ +PLH+AA+ GH A+ LL+ +A+ K D+TPLH AA GH
Sbjct: 418 LQRDASPNVSNVKVETPLHMAARAGHTEVAKYLLQNKAKVNAKAKDDQTPLHCAARIGHT 477
Query: 464 HIVELLVRNGADVNAKDMLKMTALHWATEHHHRDVVELLIKYGADVHAFSKFDKSAFDIA 643
++V+LL+ N A+ N T LH A H + L++ GA +K + +A
Sbjct: 478 NMVKLLLENNANPNLATTAGHTPLHIAAREGHVETALALLEKGASQACMTKKGFTPLHVA 537
Query: 644 LEKNNAEILVILQEAMQNQVNANPERANSVT 736
+ + +L +++ + N N +T
Sbjct: 538 AKYGKVRVAELL---LEHDAHPNAAGKNGLT 565
Score = 68.2 bits (165), Expect = 7e-12
Identities = 50/166 (30%), Positives = 82/166 (49%), Gaps = 3/166 (1%)
Frame = +2
Query: 248 AARKGQDDEVRTLMANGAPF---TTDWLGTSPLHLAAQYGHYSTAEVLLRAGVSRDARTK 418
AA+ D VR L+ A T D L +PLH+AA GH+ A+VLL G ++R
Sbjct: 306 AAQGDHLDCVRLLLQYNAEIDDITLDHL--TPLHVAAHCGHHRVAKVLLDKGAKPNSRAL 363
Query: 419 VDRTPLHMAAADGHAHIVELLVRNGADVNAKDMLKMTALHWATEHHHRDVVELLIKYGAD 598
TPLH+A H ++ELL++ GA ++A +T LH A+ H +V+ L++ A
Sbjct: 364 NGFTPLHIACKKNHIRVMELLLKTGASIDAVTESGLTPLHVASFMGHLPIVKNLLQRDAS 423
Query: 599 VHAFSKFDKSAFDIALEKNNAEILVILQEAMQNQVNANPERANSVT 736
+ + ++ +A + E+ L +QN+ N + + T
Sbjct: 424 PNVSNVKVETPLHMAARAGHTEVAKYL---LQNKAKVNAKAKDDQT 466
Score = 68.2 bits (165), Expect = 7e-12
Identities = 41/126 (32%), Positives = 64/126 (50%)
Frame = +2
Query: 323 GTSPLHLAAQYGHYSTAEVLLRAGVSRDARTKVDRTPLHMAAADGHAHIVELLVRNGADV 502
G +PLH+A+ GH + LL+ S + TPLHMAA GH + + L++N A V
Sbjct: 398 GLTPLHVASFMGHLPIVKNLLQRDASPNVSNVKVETPLHMAARAGHTEVAKYLLQNKAKV 457
Query: 503 NAKDMLKMTALHWATEHHHRDVVELLIKYGADVHAFSKFDKSAFDIALEKNNAEILVILQ 682
NAK T LH A H ++V+LL++ A+ + + + IA + + E + L
Sbjct: 458 NAKAKDDQTPLHCAARIGHTNMVKLLLENNANPNLATTAGHTPLHIAAREGHVETALALL 517
Query: 683 EAMQNQ 700
E +Q
Sbjct: 518 EKGASQ 523
Score = 62.0 bits (149), Expect = 5e-10
Identities = 48/162 (29%), Positives = 74/162 (45%)
Frame = +2
Query: 308 TTDWLGTSPLHLAAQYGHYSTAEVLLRAGVSRDARTKVDRTPLHMAAADGHAHIVELLVR 487
TT G + LH+AA G L+ G + +A+++ TPL+MAA + H +V+ L+
Sbjct: 67 TTTKKGNTALHIAALAGQDEVVRELVNYGANVNAQSQKGFTPLYMAAQENHLEVVKFLLE 126
Query: 488 NGADVNAKDMLKMTALHWATEHHHRDVVELLIKYGADVHAFSKFDKSAFDIALEKNNAEI 667
NGA+ N T L A + H +VV LI YG K A IA ++
Sbjct: 127 NGANQNVATEDGFTPLAVALQQGHENVVAHLINYGTK----GKVRLPALHIAARNDDTRT 182
Query: 668 LVILQEAMQNQVNANPERANSVTMATPFIFTSGEVVNLASLV 793
+L +QN + NP+ + I E +N+A L+
Sbjct: 183 AAVL---LQN--DPNPDVLSKTGFTPLHIAAHYENLNVAQLL 219
Score = 59.3 bits (142), Expect = 3e-09
Identities = 37/111 (33%), Positives = 57/111 (51%), Gaps = 1/111 (0%)
Frame = +2
Query: 251 ARKGQDDEVRTLMANGAPF-TTDWLGTSPLHLAAQYGHYSTAEVLLRAGVSRDARTKVDR 427
A++G L+ +G T +G +PLH+A+ YG+ + LL+ +A+TK+
Sbjct: 670 AQEGHVPVADVLIKHGVTVDATTRMGYTPLHVASHYGNIKLVKFLLQHQADVNAKTKLGY 729
Query: 428 TPLHMAAADGHAHIVELLVRNGADVNAKDMLKMTALHWATEHHHRDVVELL 580
+PLH AA GH IV LL++NGA N T L A + V ++L
Sbjct: 730 SPLHQAAQQGHTDIVTLLLKNGASPNEVSSNGTTPLAIAKRLGYISVTDVL 780
Score = 57.8 bits (138), Expect = 1e-08
Identities = 44/147 (29%), Positives = 71/147 (48%)
Frame = +2
Query: 239 LLEAARKGQDDEVRTLMANGAPFTTDWLGTSPLHLAAQYGHYSTAEVLLRAGVSRDARTK 418
L A ++G ++ V L+ G T + LH+AA+ TA VLL+ + D +K
Sbjct: 142 LAVALQQGHENVVAHLINYG---TKGKVRLPALHIAARNDDTRTAAVLLQNDPNPDVLSK 198
Query: 419 VDRTPLHMAAADGHAHIVELLVRNGADVNAKDMLKMTALHWATEHHHRDVVELLIKYGAD 598
TPLH+AA + ++ +LL+ GA VN +T LH A+ + +V LL+ GA
Sbjct: 199 TGFTPLHIAAHYENLNVAQLLLNRGASVNFTPQNGITPLHIASRRGNVIMVRLLLDRGAQ 258
Query: 599 VHAFSKFDKSAFDIALEKNNAEILVIL 679
+ +K + + A + I IL
Sbjct: 259 IETRTKDELTPLHCAARNGHLRISEIL 285
Score = 48.5 bits (114), Expect = 6e-06
Identities = 36/119 (30%), Positives = 58/119 (48%)
Frame = +2
Query: 344 AAQYGHYSTAEVLLRAGVSRDARTKVDRTPLHMAAADGHAHIVELLVRNGADVNAKDMLK 523
AA+ G+ A LR GV + + LH+A+ +GH +V L+ +
Sbjct: 13 AARSGNLDKALDHLRNGVDINTCNQNGLNGLHLASKEGHVKMVVELLHKEIILETTTKKG 72
Query: 524 MTALHWATEHHHRDVVELLIKYGADVHAFSKFDKSAFDIALEKNNAEILVILQEAMQNQ 700
TALH A +VV L+ YGA+V+A S+ + +A ++N+ E++ L E NQ
Sbjct: 73 NTALHIAALAGQDEVVRELVNYGANVNAQSQKGFTPLYMAAQENHLEVVKFLLENGANQ 131
Database: RefSeq49_SP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 11,343,932
Number of sequences in database: 24,897
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 24897
Number of Hits to DB: 27,452,798
Number of extensions: 768350
Number of successful extensions: 3308
Number of sequences better than 1.0e-05: 118
Number of HSP's gapped: 2866
Number of HSP's successfully gapped: 389
Length of query: 345
Length of database: 11,343,932
Length adjustment: 100
Effective length of query: 245
Effective length of database: 8,854,232
Effective search space: 2169286840
Effective search space used: 2169286840
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)
Search to RefSeqMP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-012619
(1035 letters)
Database: RefSeq49_MP.fasta
30,036 sequences; 15,617,559 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_084161.1| GA-binding protein subunit beta-2 [Mus musculus]. 482 e-136
Alignment gi|NP_766100.1| GA-binding protein subunit beta-2 [Mus musculus]. 482 e-136
Alignment gi|NP_997552.1| GA-binding protein subunit beta-1 isoform a [Mu... 370 e-103
Alignment gi|NP_034379.1| GA-binding protein subunit beta-1 isoform b [Mu... 370 e-103
Alignment gi|NP_001012454.1| ankyrin repeat domain-containing protein 6 [... 96 6e-20
Alignment gi|NP_001012453.1| ankyrin repeat domain-containing protein 6 [... 96 6e-20
Alignment gi|NP_536719.2| ankyrin repeat domain-containing protein 6 [Mus... 96 6e-20
Alignment gi|NP_001157107.1| tankyrase-2 [Mus musculus]. 95 1e-19
Alignment gi|NP_780300.2| tankyrase-1 [Mus musculus]. 88 1e-17
Alignment gi|NP_001104253.1| ankyrin-1 isoform 1 [Mus musculus]. 88 1e-17
>ref|NP_084161.1| GA-binding protein subunit beta-2 [Mus musculus].
Length = 414
Score = 482 bits (1241), Expect = e-136
Identities = 245/278 (88%), Positives = 259/278 (93%), Gaps = 4/278 (1%)
Frame = +2
Query: 212 MSLVDLGKRLLEAARKGQDDEVRTLMANGAPFTTDWLGTSPLHLAAQYGHYSTAEVLLRA 391
MSLVDLGKRLLEAARKGQDDEVRTLMANGAPFTTDWLGTSPLHLAAQYGHYSTAEVLLRA
Sbjct: 1 MSLVDLGKRLLEAARKGQDDEVRTLMANGAPFTTDWLGTSPLHLAAQYGHYSTAEVLLRA 60
Query: 392 GVSRDARTKVDRTPLHMAAADGHAHIVELLVRNGADVNAKDMLKMTALHWATEHHHRDVV 571
GVSRDARTKVDRTPLHMAAADGH HIVELLVR+GADVNAKDML+MTALHWATEHHHRDVV
Sbjct: 61 GVSRDARTKVDRTPLHMAAADGHVHIVELLVRSGADVNAKDMLQMTALHWATEHHHRDVV 120
Query: 572 ELLIKYGADVHAFSKFDKSAFDIALEKNNAEILVILQEAMQNQVNANPER----ANSVTM 739
ELLIKYGADV+AFSKFDKSAFDIA+EKNN EILV+LQEAMQNQVN N ER AN VT+
Sbjct: 121 ELLIKYGADVYAFSKFDKSAFDIAMEKNNTEILVMLQEAMQNQVNTNHERANPVANPVTV 180
Query: 740 ATPFIFTSGEVVNLASLVNSANTKTTSGNSEEIIDGNSVDSSIQQVVGSGGQRVITIVTD 919
PFIFTSGEV+NLAS V+SANTK TS + EE+ +GNS+DSS QQVVGSGGQRVITIVTD
Sbjct: 181 TAPFIFTSGEVINLASFVSSANTKATSAHLEEMEEGNSLDSSTQQVVGSGGQRVITIVTD 240
Query: 920 GVPLGNIQAAVPTGGIGQPFIVTMQDGQQVLTVPAGQV 1033
GVPLGNIQ ++P GGIGQPFIVTMQDGQQVLTVPAGQV
Sbjct: 241 GVPLGNIQTSLPAGGIGQPFIVTMQDGQQVLTVPAGQV 278
>ref|NP_766100.1| GA-binding protein subunit beta-2 [Mus musculus].
Length = 414
Score = 482 bits (1241), Expect = e-136
Identities = 245/278 (88%), Positives = 259/278 (93%), Gaps = 4/278 (1%)
Frame = +2
Query: 212 MSLVDLGKRLLEAARKGQDDEVRTLMANGAPFTTDWLGTSPLHLAAQYGHYSTAEVLLRA 391
MSLVDLGKRLLEAARKGQDDEVRTLMANGAPFTTDWLGTSPLHLAAQYGHYSTAEVLLRA
Sbjct: 1 MSLVDLGKRLLEAARKGQDDEVRTLMANGAPFTTDWLGTSPLHLAAQYGHYSTAEVLLRA 60
Query: 392 GVSRDARTKVDRTPLHMAAADGHAHIVELLVRNGADVNAKDMLKMTALHWATEHHHRDVV 571
GVSRDARTKVDRTPLHMAAADGH HIVELLVR+GADVNAKDML+MTALHWATEHHHRDVV
Sbjct: 61 GVSRDARTKVDRTPLHMAAADGHVHIVELLVRSGADVNAKDMLQMTALHWATEHHHRDVV 120
Query: 572 ELLIKYGADVHAFSKFDKSAFDIALEKNNAEILVILQEAMQNQVNANPER----ANSVTM 739
ELLIKYGADV+AFSKFDKSAFDIA+EKNN EILV+LQEAMQNQVN N ER AN VT+
Sbjct: 121 ELLIKYGADVYAFSKFDKSAFDIAMEKNNTEILVMLQEAMQNQVNTNHERANPVANPVTV 180
Query: 740 ATPFIFTSGEVVNLASLVNSANTKTTSGNSEEIIDGNSVDSSIQQVVGSGGQRVITIVTD 919
PFIFTSGEV+NLAS V+SANTK TS + EE+ +GNS+DSS QQVVGSGGQRVITIVTD
Sbjct: 181 TAPFIFTSGEVINLASFVSSANTKATSAHLEEMEEGNSLDSSTQQVVGSGGQRVITIVTD 240
Query: 920 GVPLGNIQAAVPTGGIGQPFIVTMQDGQQVLTVPAGQV 1033
GVPLGNIQ ++P GGIGQPFIVTMQDGQQVLTVPAGQV
Sbjct: 241 GVPLGNIQTSLPAGGIGQPFIVTMQDGQQVLTVPAGQV 278
>ref|NP_997552.1| GA-binding protein subunit beta-1 isoform a [Mus musculus].
Length = 382
Score = 370 bits (951), Expect = e-103
Identities = 198/303 (65%), Positives = 235/303 (77%), Gaps = 29/303 (9%)
Frame = +2
Query: 212 MSLVDLGKRLLEAARKGQDDEVRTLMANGAPFTTDWLGTSPLHLAAQYGHYSTAEVLLRA 391
MSLVDLGK+LLEAAR GQDDEVR LMANGAPFTTDWLGTSPLHLAAQYGH+ST EVLLRA
Sbjct: 1 MSLVDLGKKLLEAARAGQDDEVRILMANGAPFTTDWLGTSPLHLAAQYGHFSTTEVLLRA 60
Query: 392 GVSRDARTKVDRTPLHMAAADGHAHIVELLVRNGADVNAKDMLKMTALHWATEHHHRDVV 571
GVSRDARTKVDRTPLHMAA++GHA+IVE+L+++GADVNAKDMLKMTALHWATEH+H++VV
Sbjct: 61 GVSRDARTKVDRTPLHMAASEGHANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVV 120
Query: 572 ELLIKYGADVHAFSKFDKSAFDIALEKNNAEILVILQEAMQNQVNANPERANSVTM--AT 745
ELLIKYGADVH SKF K+AFDI+++ N ++ ILQ AMQNQ+N NPE ++VT+ AT
Sbjct: 121 ELLIKYGADVHTQSKFCKTAFDISIDNGNEDLAEILQIAMQNQINTNPESPDTVTIHAAT 180
Query: 746 P-FIFTSGEVVN----------------------LASLVNS----ANTKTTSGNSEEIID 844
P FI G VVN LA+L + +N+ T +EE++
Sbjct: 181 PQFIIGPGGVVNLTDETGVSAVQFGNSSTSVLATLAALAEASAPLSNSSETPVATEEVVT 240
Query: 845 GNSVDSSIQQVVGSGGQRVITIVTDGVPLGNIQAAVPTGGIGQPFIVTMQDGQQVLTVPA 1024
SVD +IQQVV SGGQ+VITIVTDG+ LGN+ ++PT G+GQP IVTM DGQQVLTVPA
Sbjct: 241 AESVDGAIQQVVSSGGQQVITIVTDGIQLGNLH-SIPTSGMGQPIIVTMPDGQQVLTVPA 299
Query: 1025 GQV 1033
+
Sbjct: 300 TDI 302
>ref|NP_034379.1| GA-binding protein subunit beta-1 isoform b [Mus musculus].
Length = 348
Score = 370 bits (951), Expect = e-103
Identities = 199/306 (65%), Positives = 234/306 (76%), Gaps = 32/306 (10%)
Frame = +2
Query: 212 MSLVDLGKRLLEAARKGQDDEVRTLMANGAPFTTDWLGTSPLHLAAQYGHYSTAEVLLRA 391
MSLVDLGK+LLEAAR GQDDEVR LMANGAPFTTDWLGTSPLHLAAQYGH+ST EVLLRA
Sbjct: 1 MSLVDLGKKLLEAARAGQDDEVRILMANGAPFTTDWLGTSPLHLAAQYGHFSTTEVLLRA 60
Query: 392 GVSRDARTKVDRTPLHMAAADGHAHIVELLVRNGADVNAKDMLKMTALHWATEHHHRDVV 571
GVSRDARTKVDRTPLHMAA++GHA+IVE+L+++GADVNAKDMLKMTALHWATEH+H++VV
Sbjct: 61 GVSRDARTKVDRTPLHMAASEGHANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVV 120
Query: 572 ELLIKYGADVHAFSKFDKSAFDIALEKNNAEILVILQEAMQNQVNANPERANSVTM--AT 745
ELLIKYGADVH SKF K+AFDI+++ N ++ ILQ AMQNQ+N NPE ++VT+ AT
Sbjct: 121 ELLIKYGADVHTQSKFCKTAFDISIDNGNEDLAEILQIAMQNQINTNPESPDTVTIHAAT 180
Query: 746 P-FIFTSGEVVNL-----------------------------ASLVNSANTKTTSGNSEE 835
P FI G VVNL A L NS+ T + +EE
Sbjct: 181 PQFIIGPGGVVNLTDETGVSAVQFGNSSTSVLATLAALAEASAPLSNSSETPVVA--TEE 238
Query: 836 IIDGNSVDSSIQQVVGSGGQRVITIVTDGVPLGNIQAAVPTGGIGQPFIVTMQDGQQVLT 1015
++ SVD +IQQVV SGGQ+VITIVTDG+ LGN+ ++PT G+GQP IVTM DGQQVLT
Sbjct: 239 VVTAESVDGAIQQVVSSGGQQVITIVTDGIQLGNLH-SIPTSGMGQPIIVTMPDGQQVLT 297
Query: 1016 VPAGQV 1033
VPA +
Sbjct: 298 VPATDI 303
>ref|NP_001012454.1| ankyrin repeat domain-containing protein 6 [Mus musculus].
Length = 712
Score = 95.5 bits (236), Expect = 6e-20
Identities = 57/151 (37%), Positives = 83/151 (54%)
Frame = +2
Query: 227 LGKRLLEAARKGQDDEVRTLMANGAPFTTDWLGTSPLHLAAQYGHYSTAEVLLRAGVSRD 406
L +RLL AA KGQ + V L+ GA G +PLHLAA GH S ++LL+AG D
Sbjct: 10 LSERLLIAAYKGQTENVVQLINKGAKVAVTKHGRTPLHLAANKGHLSVVQILLKAGCDLD 69
Query: 407 ARTKVDRTPLHMAAADGHAHIVELLVRNGADVNAKDMLKMTALHWATEHHHRDVVELLIK 586
+ D+T LH A G+ I+ L+R G ++ +D TALH A H +LL+K
Sbjct: 70 VQDDGDQTALHRATVVGNTEILTALIREGCALDRQDKDGNTALHEAAWHGFSQSAKLLVK 129
Query: 587 YGADVHAFSKFDKSAFDIALEKNNAEILVIL 679
GA+V A +K +A +A + ++++ IL
Sbjct: 130 AGANVLARNKAGNTALHLACQNSHSQSTRIL 160
Score = 75.9 bits (185), Expect = 5e-14
Identities = 49/153 (32%), Positives = 75/153 (49%), Gaps = 1/153 (0%)
Frame = +2
Query: 239 LLEAARKGQDDEVRTLMANGAP-FTTDWLGTSPLHLAAQYGHYSTAEVLLRAGVSRDART 415
L EAA G + L+ GA + G + LHLA Q H + +LL G D +
Sbjct: 112 LHEAAWHGFSQSAKLLVKAGANVLARNKAGNTALHLACQNSHSQSTRILLLGGSRADLKN 171
Query: 416 KVDRTPLHMAAADGHAHIVELLVRNGADVNAKDMLKMTALHWATEHHHRDVVELLIKYGA 595
T LH+AA H +V LL+ V+ K+ TALH A +H+ VV++L++ GA
Sbjct: 172 NAGDTCLHVAARYNHLSVVRLLLNAFCSVHEKNQAGDTALHVAAALNHKKVVKVLLEAGA 231
Query: 596 DVHAFSKFDKSAFDIALEKNNAEILVILQEAMQ 694
D + ++ + A NN E+ ++L +A Q
Sbjct: 232 DTTIVNNAGQTPLETARYHNNPEVALLLTKAPQ 264
Score = 70.1 bits (170), Expect = 3e-12
Identities = 38/122 (31%), Positives = 66/122 (54%)
Frame = +2
Query: 323 GTSPLHLAAQYGHYSTAEVLLRAGVSRDARTKVDRTPLHMAAADGHAHIVELLVRNGADV 502
G + LH AA +G +A++L++AG + AR K T LH+A + H+ +L+ G+
Sbjct: 108 GNTALHEAAWHGFSQSAKLLVKAGANVLARNKAGNTALHLACQNSHSQSTRILLLGGSRA 167
Query: 503 NAKDMLKMTALHWATEHHHRDVVELLIKYGADVHAFSKFDKSAFDIALEKNNAEILVILQ 682
+ K+ T LH A ++H VV LL+ VH ++ +A +A N+ +++ +L
Sbjct: 168 DLKNNAGDTCLHVAARYNHLSVVRLLLNAFCSVHEKNQAGDTALHVAAALNHKKVVKVLL 227
Query: 683 EA 688
EA
Sbjct: 228 EA 229
Score = 55.5 bits (132), Expect = 7e-08
Identities = 39/126 (30%), Positives = 64/126 (50%)
Frame = +2
Query: 335 LHLAAQYGHYSTAEVLLRAGVSRDARTKVDRTPLHMAAADGHAHIVELLVRNGADVNAKD 514
L +AA G L+ G ++ A TK RTPLH+AA GH +V++L++ G D++ +D
Sbjct: 14 LLIAAYKGQTENVVQLINKG-AKVAVTKHGRTPLHLAANKGHLSVVQILLKAGCDLDVQD 72
Query: 515 MLKMTALHWATEHHHRDVVELLIKYGADVHAFSKFDKSAFDIALEKNNAEILVILQEAMQ 694
TALH AT + +++ LI+ G + K +A A ++ +L +A
Sbjct: 73 DGDQTALHRATVVGNTEILTALIREGCALDRQDKDGNTALHEAAWHGFSQSAKLLVKAGA 132
Query: 695 NQVNAN 712
N + N
Sbjct: 133 NVLARN 138
>ref|NP_001012453.1| ankyrin repeat domain-containing protein 6 [Mus musculus].
Length = 712
Score = 95.5 bits (236), Expect = 6e-20
Identities = 57/151 (37%), Positives = 83/151 (54%)
Frame = +2
Query: 227 LGKRLLEAARKGQDDEVRTLMANGAPFTTDWLGTSPLHLAAQYGHYSTAEVLLRAGVSRD 406
L +RLL AA KGQ + V L+ GA G +PLHLAA GH S ++LL+AG D
Sbjct: 10 LSERLLIAAYKGQTENVVQLINKGAKVAVTKHGRTPLHLAANKGHLSVVQILLKAGCDLD 69
Query: 407 ARTKVDRTPLHMAAADGHAHIVELLVRNGADVNAKDMLKMTALHWATEHHHRDVVELLIK 586
+ D+T LH A G+ I+ L+R G ++ +D TALH A H +LL+K
Sbjct: 70 VQDDGDQTALHRATVVGNTEILTALIREGCALDRQDKDGNTALHEAAWHGFSQSAKLLVK 129
Query: 587 YGADVHAFSKFDKSAFDIALEKNNAEILVIL 679
GA+V A +K +A +A + ++++ IL
Sbjct: 130 AGANVLARNKAGNTALHLACQNSHSQSTRIL 160
Score = 75.9 bits (185), Expect = 5e-14
Identities = 49/153 (32%), Positives = 75/153 (49%), Gaps = 1/153 (0%)
Frame = +2
Query: 239 LLEAARKGQDDEVRTLMANGAP-FTTDWLGTSPLHLAAQYGHYSTAEVLLRAGVSRDART 415
L EAA G + L+ GA + G + LHLA Q H + +LL G D +
Sbjct: 112 LHEAAWHGFSQSAKLLVKAGANVLARNKAGNTALHLACQNSHSQSTRILLLGGSRADLKN 171
Query: 416 KVDRTPLHMAAADGHAHIVELLVRNGADVNAKDMLKMTALHWATEHHHRDVVELLIKYGA 595
T LH+AA H +V LL+ V+ K+ TALH A +H+ VV++L++ GA
Sbjct: 172 NAGDTCLHVAARYNHLSVVRLLLNAFCSVHEKNQAGDTALHVAAALNHKKVVKVLLEAGA 231
Query: 596 DVHAFSKFDKSAFDIALEKNNAEILVILQEAMQ 694
D + ++ + A NN E+ ++L +A Q
Sbjct: 232 DTTIVNNAGQTPLETARYHNNPEVALLLTKAPQ 264
Score = 70.1 bits (170), Expect = 3e-12
Identities = 38/122 (31%), Positives = 66/122 (54%)
Frame = +2
Query: 323 GTSPLHLAAQYGHYSTAEVLLRAGVSRDARTKVDRTPLHMAAADGHAHIVELLVRNGADV 502
G + LH AA +G +A++L++AG + AR K T LH+A + H+ +L+ G+
Sbjct: 108 GNTALHEAAWHGFSQSAKLLVKAGANVLARNKAGNTALHLACQNSHSQSTRILLLGGSRA 167
Query: 503 NAKDMLKMTALHWATEHHHRDVVELLIKYGADVHAFSKFDKSAFDIALEKNNAEILVILQ 682
+ K+ T LH A ++H VV LL+ VH ++ +A +A N+ +++ +L
Sbjct: 168 DLKNNAGDTCLHVAARYNHLSVVRLLLNAFCSVHEKNQAGDTALHVAAALNHKKVVKVLL 227
Query: 683 EA 688
EA
Sbjct: 228 EA 229
Score = 55.5 bits (132), Expect = 7e-08
Identities = 39/126 (30%), Positives = 64/126 (50%)
Frame = +2
Query: 335 LHLAAQYGHYSTAEVLLRAGVSRDARTKVDRTPLHMAAADGHAHIVELLVRNGADVNAKD 514
L +AA G L+ G ++ A TK RTPLH+AA GH +V++L++ G D++ +D
Sbjct: 14 LLIAAYKGQTENVVQLINKG-AKVAVTKHGRTPLHLAANKGHLSVVQILLKAGCDLDVQD 72
Query: 515 MLKMTALHWATEHHHRDVVELLIKYGADVHAFSKFDKSAFDIALEKNNAEILVILQEAMQ 694
TALH AT + +++ LI+ G + K +A A ++ +L +A
Sbjct: 73 DGDQTALHRATVVGNTEILTALIREGCALDRQDKDGNTALHEAAWHGFSQSAKLLVKAGA 132
Query: 695 NQVNAN 712
N + N
Sbjct: 133 NVLARN 138
>ref|NP_536719.2| ankyrin repeat domain-containing protein 6 [Mus musculus].
Length = 712
Score = 95.5 bits (236), Expect = 6e-20
Identities = 57/151 (37%), Positives = 83/151 (54%)
Frame = +2
Query: 227 LGKRLLEAARKGQDDEVRTLMANGAPFTTDWLGTSPLHLAAQYGHYSTAEVLLRAGVSRD 406
L +RLL AA KGQ + V L+ GA G +PLHLAA GH S ++LL+AG D
Sbjct: 10 LSERLLIAAYKGQTENVVQLINKGAKVAVTKHGRTPLHLAANKGHLSVVQILLKAGCDLD 69
Query: 407 ARTKVDRTPLHMAAADGHAHIVELLVRNGADVNAKDMLKMTALHWATEHHHRDVVELLIK 586
+ D+T LH A G+ I+ L+R G ++ +D TALH A H +LL+K
Sbjct: 70 VQDDGDQTALHRATVVGNTEILTALIREGCALDRQDKDGNTALHEAAWHGFSQSAKLLVK 129
Query: 587 YGADVHAFSKFDKSAFDIALEKNNAEILVIL 679
GA+V A +K +A +A + ++++ IL
Sbjct: 130 AGANVLARNKAGNTALHLACQNSHSQSTRIL 160
Score = 75.9 bits (185), Expect = 5e-14
Identities = 49/153 (32%), Positives = 75/153 (49%), Gaps = 1/153 (0%)
Frame = +2
Query: 239 LLEAARKGQDDEVRTLMANGAP-FTTDWLGTSPLHLAAQYGHYSTAEVLLRAGVSRDART 415
L EAA G + L+ GA + G + LHLA Q H + +LL G D +
Sbjct: 112 LHEAAWHGFSQSAKLLVKAGANVLARNKAGNTALHLACQNSHSQSTRILLLGGSRADLKN 171
Query: 416 KVDRTPLHMAAADGHAHIVELLVRNGADVNAKDMLKMTALHWATEHHHRDVVELLIKYGA 595
T LH+AA H +V LL+ V+ K+ TALH A +H+ VV++L++ GA
Sbjct: 172 NAGDTCLHVAARYNHLSVVRLLLNAFCSVHEKNQAGDTALHVAAALNHKKVVKVLLEAGA 231
Query: 596 DVHAFSKFDKSAFDIALEKNNAEILVILQEAMQ 694
D + ++ + A NN E+ ++L +A Q
Sbjct: 232 DTTIVNNAGQTPLETARYHNNPEVALLLTKAPQ 264
Score = 70.1 bits (170), Expect = 3e-12
Identities = 38/122 (31%), Positives = 66/122 (54%)
Frame = +2
Query: 323 GTSPLHLAAQYGHYSTAEVLLRAGVSRDARTKVDRTPLHMAAADGHAHIVELLVRNGADV 502
G + LH AA +G +A++L++AG + AR K T LH+A + H+ +L+ G+
Sbjct: 108 GNTALHEAAWHGFSQSAKLLVKAGANVLARNKAGNTALHLACQNSHSQSTRILLLGGSRA 167
Query: 503 NAKDMLKMTALHWATEHHHRDVVELLIKYGADVHAFSKFDKSAFDIALEKNNAEILVILQ 682
+ K+ T LH A ++H VV LL+ VH ++ +A +A N+ +++ +L
Sbjct: 168 DLKNNAGDTCLHVAARYNHLSVVRLLLNAFCSVHEKNQAGDTALHVAAALNHKKVVKVLL 227
Query: 683 EA 688
EA
Sbjct: 228 EA 229
Score = 55.5 bits (132), Expect = 7e-08
Identities = 39/126 (30%), Positives = 64/126 (50%)
Frame = +2
Query: 335 LHLAAQYGHYSTAEVLLRAGVSRDARTKVDRTPLHMAAADGHAHIVELLVRNGADVNAKD 514
L +AA G L+ G ++ A TK RTPLH+AA GH +V++L++ G D++ +D
Sbjct: 14 LLIAAYKGQTENVVQLINKG-AKVAVTKHGRTPLHLAANKGHLSVVQILLKAGCDLDVQD 72
Query: 515 MLKMTALHWATEHHHRDVVELLIKYGADVHAFSKFDKSAFDIALEKNNAEILVILQEAMQ 694
TALH AT + +++ LI+ G + K +A A ++ +L +A
Sbjct: 73 DGDQTALHRATVVGNTEILTALIREGCALDRQDKDGNTALHEAAWHGFSQSAKLLVKAGA 132
Query: 695 NQVNAN 712
N + N
Sbjct: 133 NVLARN 138
>ref|NP_001157107.1| tankyrase-2 [Mus musculus].
Length = 1166
Score = 94.7 bits (234), Expect = 1e-19
Identities = 54/137 (39%), Positives = 78/137 (56%), Gaps = 2/137 (1%)
Frame = +2
Query: 239 LLEAARKGQDDEVRTLMA--NGAPFTTDWLGTSPLHLAAQYGHYSTAEVLLRAGVSRDAR 412
LLE+AR G ++++ L+ N +D ++PLHLAA Y ++LL G A+
Sbjct: 181 LLESARSGNEEKMMALLTPLNVNCHASDGRKSTPLHLAAGYNRVKIVQLLLHHGADVHAK 240
Query: 413 TKVDRTPLHMAAADGHAHIVELLVRNGADVNAKDMLKMTALHWATEHHHRDVVELLIKYG 592
K D PLH A + GH + ELLV++GA VNA D+ + T LH A + +V LL+ YG
Sbjct: 241 DKGDLVPLHNACSYGHYEVTELLVKHGACVNAMDLWQFTPLHEAASKNRIEVCSLLLSYG 300
Query: 593 ADVHAFSKFDKSAFDIA 643
AD + +KSA D+A
Sbjct: 301 ADPTLLNCHNKSAIDLA 317
Score = 80.9 bits (198), Expect = 2e-15
Identities = 48/124 (38%), Positives = 69/124 (55%), Gaps = 2/124 (1%)
Frame = +2
Query: 233 KRLLEAARKGQDDEVRTLMANGAPFTTDWLG--TSPLHLAAQYGHYSTAEVLLRAGVSRD 406
++LLEAA+ G + V+ L + D G ++PLH AA Y S E LL+ G
Sbjct: 494 RQLLEAAKAGDVETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGADVH 553
Query: 407 ARTKVDRTPLHMAAADGHAHIVELLVRNGADVNAKDMLKMTALHWATEHHHRDVVELLIK 586
A+ K PLH A + GH + ELLV++GA VN D+ K T LH A ++ +LL++
Sbjct: 554 AKDKGGLVPLHNACSYGHYEVAELLVKHGAVVNVADLWKFTPLHEAAAKGKYEICKLLLQ 613
Query: 587 YGAD 598
+GAD
Sbjct: 614 HGAD 617
Score = 79.3 bits (194), Expect = 4e-15
Identities = 49/139 (35%), Positives = 74/139 (53%), Gaps = 2/139 (1%)
Frame = +2
Query: 233 KRLLEAARKGQDDEVRTLMANGAPFTTDWLG--TSPLHLAAQYGHYSTAEVLLRAGVSRD 406
+ L EA R G + V+ L+ + D G ++PLH AA +G E LL+ G +
Sbjct: 26 RELFEACRNGDVERVKRLVTPEKVNSRDTAGRKSTPLHFAAGFGRKDVVEYLLQNGANVQ 85
Query: 407 ARTKVDRTPLHMAAADGHAHIVELLVRNGADVNAKDMLKMTALHWATEHHHRDVVELLIK 586
AR PLH A + GHA +V LL+++GAD NA+D T LH A DV +L++
Sbjct: 86 ARDDGGLIPLHNACSFGHAEVVNLLLQHGADPNARDNWNYTPLHEAAIKGKIDVCIVLLQ 145
Query: 587 YGADVHAFSKFDKSAFDIA 643
+GA+ + ++A D+A
Sbjct: 146 HGAEPTIRNTDGRTALDLA 164
Score = 79.3 bits (194), Expect = 4e-15
Identities = 64/240 (26%), Positives = 111/240 (46%), Gaps = 22/240 (9%)
Frame = +2
Query: 239 LLEAARKGQDDEVRTLMANGAPFTTDWLG--TSPLHLAAQYGHYSTAEVLLRAGVSRDAR 412
LL+AA+KG V+ L + D G ++PLHLAA Y + AE LL+ G +A+
Sbjct: 649 LLDAAKKGCLARVKKLSSPDNVNCRDTQGRHSTPLHLAAGYNNLEVAEYLLQHGADVNAQ 708
Query: 413 TKVDRTPLHMAAADGHAHIVELLVRNGADVNAKDMLKMTALHWATEHHHRDVVELLIKYG 592
K PLH AA+ GH + LL++ A VNA D T LH A + + LL+ +G
Sbjct: 709 DKGGLIPLHNAASYGHVDVAALLIKYNACVNATDKWAFTPLHEAAQKGRTQLCALLLAHG 768
Query: 593 ADVHAFSKFDKSAFDIALEKNNAEILVILQE--------------------AMQNQVNAN 712
AD ++ ++ D+ + + +L A + +++
Sbjct: 769 ADPTLKNQEGQTPLDLVSADDVSALLTAAMPPSALPTCYKPQVLSGVRGPGATADALSSG 828
Query: 713 PERANSVTMATPFIFTSGEVVNLASLVNSANTKTTSGNSEEIIDGNSVDSSIQQVVGSGG 892
P +S++ A+ SG L+++V+S+ + +G + + + +D SI Q + + G
Sbjct: 829 PSSPSSLSAASSLDNLSGSFSELSAVVSSSAAEGATGLQRK--EDSGIDFSITQFIRNLG 886
Score = 69.7 bits (169), Expect = 4e-12
Identities = 52/156 (33%), Positives = 76/156 (48%), Gaps = 4/156 (2%)
Frame = +2
Query: 230 GKRLLEAARKGQDDEVRT-LMANGAPFTTDWLGTSPLHLAAQYGH---YSTAEVLLRAGV 397
G LL+AAR+ ++ L F + LH AA + E+LLR G
Sbjct: 332 GHSLLQAAREADVTRIKKHLSLEMVNFKHPQTHETALHCAAASPYPKRKQICELLLRKGA 391
Query: 398 SRDARTKVDRTPLHMAAADGHAHIVELLVRNGADVNAKDMLKMTALHWATEHHHRDVVEL 577
+ + +TK TPLH+A+ + H +VE++V++ A VNA D L T+LH A H L
Sbjct: 392 NTNEKTKEFLTPLHVASENAHNDVVEVVVKHEAKVNALDSLGQTSLHRAAHCGHLQTCRL 451
Query: 578 LIKYGADVHAFSKFDKSAFDIALEKNNAEILVILQE 685
L+ YG D + S F AL+ N + +LQE
Sbjct: 452 LLSYGCDPNIIS---LQGF-TALQMGNENVQQLLQE 483
Score = 68.2 bits (165), Expect = 1e-11
Identities = 57/169 (33%), Positives = 79/169 (46%), Gaps = 22/169 (13%)
Frame = +2
Query: 239 LLEAARKGQDDEVRTLMANGA-PFTTDWLGTSPLHLA------AQYGHYSTAEVLLRA-- 391
L EAA KG+ D L+ +GA P + G + L LA G Y E+L A
Sbjct: 128 LHEAAIKGKIDVCIVLLQHGAEPTIRNTDGRTALDLADPSAKAVLTGDYKKDELLESARS 187
Query: 392 -------------GVSRDARTKVDRTPLHMAAADGHAHIVELLVRNGADVNAKDMLKMTA 532
V+ A TPLH+AA IV+LL+ +GADV+AKD +
Sbjct: 188 GNEEKMMALLTPLNVNCHASDGRKSTPLHLAAGYNRVKIVQLLLHHGADVHAKDKGDLVP 247
Query: 533 LHWATEHHHRDVVELLIKYGADVHAFSKFDKSAFDIALEKNNAEILVIL 679
LH A + H +V ELL+K+GA V+A + + A KN E+ +L
Sbjct: 248 LHNACSYGHYEVTELLVKHGACVNAMDLWQFTPLHEAASKNRIEVCSLL 296
Score = 61.6 bits (148), Expect = 1e-09
Identities = 34/107 (31%), Positives = 57/107 (53%)
Frame = +2
Query: 428 TPLHMAAADGHAHIVELLVRNGADVNAKDMLKMTALHWATEHHHRDVVELLIKYGADVHA 607
TPLH AA G +VE L++NGA+V A+D + LH A H +VV LL+++GAD +A
Sbjct: 60 TPLHFAAGFGRKDVVEYLLQNGANVQARDDGGLIPLHNACSFGHAEVVNLLLQHGADPNA 119
Query: 608 FSKFDKSAFDIALEKNNAEILVILQEAMQNQVNANPERANSVTMATP 748
++ + A K ++ ++L + N + ++ +A P
Sbjct: 120 RDNWNYTPLHEAAIKGKIDVCIVLLQHGAEPTIRNTDGRTALDLADP 166
Score = 59.3 bits (142), Expect = 5e-09
Identities = 37/100 (37%), Positives = 53/100 (53%)
Frame = +2
Query: 428 TPLHMAAADGHAHIVELLVRNGADVNAKDMLKMTALHWATEHHHRDVVELLIKYGADVHA 607
TPLH AA +VE L+++GADV+AKD + LH A + H +V ELL+K+GA V+
Sbjct: 528 TPLHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNACSYGHYEVAELLVKHGAVVNV 587
Query: 608 FSKFDKSAFDIALEKNNAEILVILQEAMQNQVNANPERAN 727
+ + A K EI +L Q A+P + N
Sbjct: 588 ADLWKFTPLHEAAAKGKYEICKLLL-----QHGADPTKKN 622
Score = 54.3 bits (129), Expect = 2e-07
Identities = 33/81 (40%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Frame = +2
Query: 275 VRTLMANGAPF-TTDWLGTSPLHLAAQYGHYSTAEVLLRAGVSRDARTKVDRTPLHMAAA 451
V L+ +GA D G PLH A YGHY AE+L++ G + TPLH AAA
Sbjct: 542 VEYLLQHGADVHAKDKGGLVPLHNACSYGHYEVAELLVKHGAVVNVADLWKFTPLHEAAA 601
Query: 452 DGHAHIVELLVRNGADVNAKD 514
G I +LL+++GAD K+
Sbjct: 602 KGKYEICKLLLQHGADPTKKN 622
>ref|NP_780300.2| tankyrase-1 [Mus musculus].
Length = 1320
Score = 88.2 bits (217), Expect = 1e-17
Identities = 52/137 (37%), Positives = 77/137 (56%), Gaps = 2/137 (1%)
Frame = +2
Query: 239 LLEAARKGQDDEVRTLMA--NGAPFTTDWLGTSPLHLAAQYGHYSTAEVLLRAGVSRDAR 412
LLEAAR G ++++ L+ N +D ++PLHLAA Y ++LL+ G A+
Sbjct: 332 LLEAARSGNEEKLMALLTPLNVNCHASDGRKSTPLHLAAGYNRVRIVQLLLQHGADVHAK 391
Query: 413 TKVDRTPLHMAAADGHAHIVELLVRNGADVNAKDMLKMTALHWATEHHHRDVVELLIKYG 592
K PLH A + GH + ELL+++GA VNA D+ + T LH A + +V LL+ +G
Sbjct: 392 DKGGLVPLHNACSYGHYEVTELLLKHGACVNAMDLWQFTPLHEAASKNRVEVCSLLLSHG 451
Query: 593 ADVHAFSKFDKSAFDIA 643
AD + KSA D+A
Sbjct: 452 ADPTLVNCHGKSAVDMA 468
Score = 86.3 bits (212), Expect = 4e-17
Identities = 54/148 (36%), Positives = 76/148 (51%), Gaps = 2/148 (1%)
Frame = +2
Query: 212 MSLVDLGKRLLEAARKGQDDEVRTLMANGAPFTTDWLG--TSPLHLAAQYGHYSTAEVLL 385
M D+ RLLEA++ G + V+ L + D G ++PLH AA Y S E LL
Sbjct: 638 MRTSDVDYRLLEASKAGDLETVKQLCSPQNVNCRDLEGRHSTPLHFAAGYNRVSVVEYLL 697
Query: 386 RAGVSRDARTKVDRTPLHMAAADGHAHIVELLVRNGADVNAKDMLKMTALHWATEHHHRD 565
G A+ K PLH A + GH + ELLVR+GA VN D+ K T LH A +
Sbjct: 698 HHGADVHAKDKGGLVPLHNACSYGHYEVAELLVRHGASVNVADLWKFTPLHEAAAKGKYE 757
Query: 566 VVELLIKYGADVHAFSKFDKSAFDIALE 649
+ +LL+K+GAD ++ + D+ E
Sbjct: 758 ICKLLLKHGADPTKKNRDGNTPLDLVKE 785
Score = 83.2 bits (204), Expect = 3e-16
Identities = 54/139 (38%), Positives = 72/139 (51%), Gaps = 2/139 (1%)
Frame = +2
Query: 233 KRLLEAARKGQDDEVRTLMANGAPFTTDWLG--TSPLHLAAQYGHYSTAEVLLRAGVSRD 406
+ LLEA R G V+ L+ D G +SPLH AA +G E LL+ G +
Sbjct: 177 RELLEACRNGDVSRVKRLVDAANVNAKDMAGRKSSPLHFAAGFGRKDVVEHLLQMGANVH 236
Query: 407 ARTKVDRTPLHMAAADGHAHIVELLVRNGADVNAKDMLKMTALHWATEHHHRDVVELLIK 586
AR PLH A + GHA +V LL+ GAD NA+D T LH A DV +L++
Sbjct: 237 ARDDGGLIPLHNACSFGHAEVVSLLLCQGADPNARDNWNYTPLHEAAIKGKIDVCIVLLQ 296
Query: 587 YGADVHAFSKFDKSAFDIA 643
+GAD + + KSA D+A
Sbjct: 297 HGADPNIRNTDGKSALDLA 315
Score = 75.9 bits (185), Expect = 5e-14
Identities = 68/221 (30%), Positives = 103/221 (46%), Gaps = 4/221 (1%)
Frame = +2
Query: 239 LLEAARKGQDDEVRTLMANGAPFTTDWLG--TSPLHLAAQYGHYSTAEVLLRAGVSRDAR 412
LL+AA+KG V+ L D G ++PLHLAA Y + AE LL G +A+
Sbjct: 800 LLDAAKKGCLARVQKLCTPENINCRDTQGRNSTPLHLAAGYNNLEVAEYLLEHGADVNAQ 859
Query: 413 TKVDRTPLHMAAADGHAHIVELLVRNGADVNAKDMLKMTALHWATEHHHRDVVELLIKYG 592
K PLH AA+ GH I LL++ VNA D T LH A + + LL+ +G
Sbjct: 860 DKGGLIPLHNAASYGHVDIAALLIKYNTCVNATDKWAFTPLHEAAQKGRTQLCALLLAHG 919
Query: 593 ADVHAFSKFDKSAFDIALEKNNAEILVILQEAMQNQVNANPERANSVTMATPFIFTSGEV 772
AD ++ ++ D+A +I +L +AM PE A P F
Sbjct: 920 ADPTMKNQEGQTPLDLATAD---DIRALLIDAMP------PE-------ALPTCFKPQAT 963
Query: 773 VNLASLVNSANTKT--TSGNSEEIIDGNSVDSSIQQVVGSG 889
V ASL++ A+T + ++ +S + + G D ++ +G
Sbjct: 964 VVSASLISPASTPSCLSAASSIDNLTGPLTDLAVGGASNAG 1004
Score = 70.9 bits (172), Expect = 2e-12
Identities = 62/190 (32%), Positives = 87/190 (45%), Gaps = 22/190 (11%)
Frame = +2
Query: 239 LLEAARKGQDDEVRTLMANGA-PFTTDWLGTSPLHLA------AQYGHYSTAEVLLRA-- 391
L EAA KG+ D L+ +GA P + G S L LA G Y E+L A
Sbjct: 279 LHEAAIKGKIDVCIVLLQHGADPNIRNTDGKSALDLADPSAKAVLTGEYKKDELLEAARS 338
Query: 392 -------------GVSRDARTKVDRTPLHMAAADGHAHIVELLVRNGADVNAKDMLKMTA 532
V+ A TPLH+AA IV+LL+++GADV+AKD +
Sbjct: 339 GNEEKLMALLTPLNVNCHASDGRKSTPLHLAAGYNRVRIVQLLLQHGADVHAKDKGGLVP 398
Query: 533 LHWATEHHHRDVVELLIKYGADVHAFSKFDKSAFDIALEKNNAEILVILQEAMQNQVNAN 712
LH A + H +V ELL+K+GA V+A + + A KN E+ +L + N
Sbjct: 399 LHNACSYGHYEVTELLLKHGACVNAMDLWQFTPLHEAASKNRVEVCSLLLSHGADPTLVN 458
Query: 713 PERANSVTMA 742
++V MA
Sbjct: 459 CHGKSAVDMA 468
Score = 67.4 bits (163), Expect = 2e-11
Identities = 47/127 (37%), Positives = 65/127 (51%), Gaps = 4/127 (3%)
Frame = +2
Query: 230 GKRLLEAARKGQDDEVR-TLMANGAPFTTDWLGTSPLHLAAQYGH---YSTAEVLLRAGV 397
G LL+AAR+ +V+ TL F + LH A H AE+LLR G
Sbjct: 483 GHSLLQAAREADLAKVKKTLALEIINFKQPQSHETALHCAVASLHPKRKQVAELLLRKGA 542
Query: 398 SRDARTKVDRTPLHMAAADGHAHIVELLVRNGADVNAKDMLKMTALHWATEHHHRDVVEL 577
+ + + K TPLH+AA H ++E+L ++GA +NA D L TALH A H L
Sbjct: 543 NVNEKNKDFMTPLHVAAERAHNDVMEVLHKHGAKMNALDSLGQTALHRAALAGHLQTCRL 602
Query: 578 LIKYGAD 598
L+ YG+D
Sbjct: 603 LLSYGSD 609
Score = 58.2 bits (139), Expect = 1e-08
Identities = 32/84 (38%), Positives = 46/84 (54%)
Frame = +2
Query: 428 TPLHMAAADGHAHIVELLVRNGADVNAKDMLKMTALHWATEHHHRDVVELLIKYGADVHA 607
TPLH AA +VE L+ +GADV+AKD + LH A + H +V ELL+++GA V+
Sbjct: 679 TPLHFAAGYNRVSVVEYLLHHGADVHAKDKGGLVPLHNACSYGHYEVAELLVRHGASVNV 738
Query: 608 FSKFDKSAFDIALEKNNAEILVIL 679
+ + A K EI +L
Sbjct: 739 ADLWKFTPLHEAAAKGKYEICKLL 762
Score = 55.1 bits (131), Expect = 9e-08
Identities = 46/156 (29%), Positives = 74/156 (47%), Gaps = 25/156 (16%)
Frame = +2
Query: 239 LLEAARKGQDDEVRTLMANGA-PFTTDWLGTSPLHLAA----------QYGHYSTAEVLL 385
L EAA K + + L+++GA P + G S + +A ++ +S +
Sbjct: 432 LHEAASKNRVEVCSLLLSHGADPTLVNCHGKSAVDMAPTPELRERLTYEFKGHSLLQAAR 491
Query: 386 RAGVSRDART-----------KVDRTPLHMAAADGHA---HIVELLVRNGADVNAKDMLK 523
A +++ +T + T LH A A H + ELL+R GA+VN K+
Sbjct: 492 EADLAKVKKTLALEIINFKQPQSHETALHCAVASLHPKRKQVAELLLRKGANVNEKNKDF 551
Query: 524 MTALHWATEHHHRDVVELLIKYGADVHAFSKFDKSA 631
MT LH A E H DV+E+L K+GA ++A ++A
Sbjct: 552 MTPLHVAAERAHNDVMEVLHKHGAKMNALDSLGQTA 587
Score = 53.5 bits (127), Expect = 3e-07
Identities = 32/107 (29%), Positives = 57/107 (53%)
Frame = +2
Query: 428 TPLHMAAADGHAHIVELLVRNGADVNAKDMLKMTALHWATEHHHRDVVELLIKYGADVHA 607
+PLH AA G +VE L++ GA+V+A+D + LH A H +VV LL+ GAD +A
Sbjct: 211 SPLHFAAGFGRKDVVEHLLQMGANVHARDDGGLIPLHNACSFGHAEVVSLLLCQGADPNA 270
Query: 608 FSKFDKSAFDIALEKNNAEILVILQEAMQNQVNANPERANSVTMATP 748
++ + A K ++ ++L + + N + +++ +A P
Sbjct: 271 RDNWNYTPLHEAAIKGKIDVCIVLLQHGADPNIRNTDGKSALDLADP 317
>ref|NP_001104253.1| ankyrin-1 isoform 1 [Mus musculus].
Length = 1907
Score = 87.8 bits (216), Expect = 1e-17
Identities = 59/164 (35%), Positives = 83/164 (50%), Gaps = 1/164 (0%)
Frame = +2
Query: 248 AARKGQDDEVRTLMANGA-PFTTDWLGTSPLHLAAQYGHYSTAEVLLRAGVSRDARTKVD 424
AAR G V+ L+ NGA P G +PLH AA+ GH TA LL S+ TK
Sbjct: 510 AARIGHTGMVKLLLENGASPNLATTAGHTPLHTAAREGHVDTALALLEKEASQACMTKKG 569
Query: 425 RTPLHMAAADGHAHIVELLVRNGADVNAKDMLKMTALHWATEHHHRDVVELLIKYGADVH 604
TPLH+AA G + ELL+ + A NA +T LH A H++ D+V+LL+ G H
Sbjct: 570 FTPLHVAAKYGKVRLAELLLEHDAHPNAAGKNGLTPLHVAVHHNNLDIVKLLLPRGGSPH 629
Query: 605 AFSKFDKSAFDIALEKNNAEILVILQEAMQNQVNANPERANSVT 736
+ + + IA ++N E + + +Q +AN E VT
Sbjct: 630 SPAWNGYTPLHIAAKQNQIE---VARSLLQYGGSANAESVQGVT 670
Score = 87.4 bits (215), Expect = 2e-17
Identities = 51/133 (38%), Positives = 79/133 (59%), Gaps = 1/133 (0%)
Frame = +2
Query: 248 AARKGQDDEVRTLMANGAPFTT-DWLGTSPLHLAAQYGHYSTAEVLLRAGVSRDARTKVD 424
AA++G + V L++ A + G +PLHL +Q GH A+VL++ GV+ DA T++
Sbjct: 675 AAQEGHTEMVALLLSKQANGNLGNKSGLTPLHLVSQEGHVPVADVLIKHGVTVDATTRMG 734
Query: 425 RTPLHMAAADGHAHIVELLVRNGADVNAKDMLKMTALHWATEHHHRDVVELLIKYGADVH 604
TPLH+A+ G+ +V+ L+++ ADVNAK L + LH A + H D+V LL+K GA +
Sbjct: 735 YTPLHVASHYGNIKLVKFLLQHQADVNAKTKLGYSPLHQAAQQGHTDIVTLLLKNGASPN 794
Query: 605 AFSKFDKSAFDIA 643
S + IA
Sbjct: 795 EVSSNGTTPLAIA 807
Score = 84.0 bits (206), Expect = 2e-16
Identities = 48/158 (30%), Positives = 90/158 (56%), Gaps = 3/158 (1%)
Frame = +2
Query: 248 AARKGQDDEVRTLMANGAPFTTDWL-GTSPLHLAAQYGHYSTAEVLLRAGVSRDARTKVD 424
AA++ Q + R+L+ G + + G +PLHLAAQ GH +LL + + K
Sbjct: 642 AAKQNQIEVARSLLQYGGSANAESVQGVTPLHLAAQEGHTEMVALLLSKQANGNLGNKSG 701
Query: 425 RTPLHMAAADGHAHIVELLVRNGADVNAKDMLKMTALHWATEHHHRDVVELLIKYGADVH 604
TPLH+ + +GH + ++L+++G V+A + T LH A+ + + +V+ L+++ ADV+
Sbjct: 702 LTPLHLVSQEGHVPVADVLIKHGVTVDATTRMGYTPLHVASHYGNIKLVKFLLQHQADVN 761
Query: 605 AFSKFDKSAFDIALEKNNAEILVILQE--AMQNQVNAN 712
A +K S A ++ + +I+ +L + A N+V++N
Sbjct: 762 AKTKLGYSPLHQAAQQGHTDIVTLLLKNGASPNEVSSN 799
Score = 80.9 bits (198), Expect = 2e-15
Identities = 46/143 (32%), Positives = 76/143 (53%)
Frame = +2
Query: 284 LMANGAPFTTDWLGTSPLHLAAQYGHYSTAEVLLRAGVSRDARTKVDRTPLHMAAADGHA 463
L G+P + W G +PLH+AA+ A LL+ G S +A + TPLH+AA +GH
Sbjct: 622 LPRGGSPHSPAWNGYTPLHIAAKQNQIEVARSLLQYGGSANAESVQGVTPLHLAAQEGHT 681
Query: 464 HIVELLVRNGADVNAKDMLKMTALHWATEHHHRDVVELLIKYGADVHAFSKFDKSAFDIA 643
+V LL+ A+ N + +T LH ++ H V ++LIK+G V A ++ + +A
Sbjct: 682 EMVALLLSKQANGNLGNKSGLTPLHLVSQEGHVPVADVLIKHGVTVDATTRMGYTPLHVA 741
Query: 644 LEKNNAEILVILQEAMQNQVNAN 712
N +++ L +Q+Q + N
Sbjct: 742 SHYGNIKLVKFL---LQHQADVN 761
Score = 77.0 bits (188), Expect = 2e-14
Identities = 55/192 (28%), Positives = 88/192 (45%), Gaps = 1/192 (0%)
Frame = +2
Query: 107 EKETGPNWRARRKHSRQRPGRGVIASHKLVFLCIKMSLVDLGKRLLEAARKGQDDEVRTL 286
+KE + R RR SR R + D L AAR G D+
Sbjct: 22 QKEKEESNRKRRNRSRDRKKKA-----------------DAATSFLRAARSGNLDKALDH 64
Query: 287 MANGAPFTT-DWLGTSPLHLAAQYGHYSTAEVLLRAGVSRDARTKVDRTPLHMAAADGHA 463
+ NG T + G + LHLA++ GH LL + + TK T LH+AA G
Sbjct: 65 LRNGVDINTCNQNGLNGLHLASKEGHVKMVVELLHKEIILETTTKKGNTALHIAALAGQD 124
Query: 464 HIVELLVRNGADVNAKDMLKMTALHWATEHHHRDVVELLIKYGADVHAFSKFDKSAFDIA 643
+V LV GA+VNA+ T L+ A + +H +VV+ L++ GA+ + ++ + +A
Sbjct: 125 EVVRELVNYGANVNAQSQKGFTPLYMAAQENHLEVVKFLLENGANQNVATEDGFTPLAVA 184
Query: 644 LEKNNAEILVIL 679
L++ + ++ L
Sbjct: 185 LQQGHENVVAHL 196
Score = 75.9 bits (185), Expect = 5e-14
Identities = 36/93 (38%), Positives = 57/93 (61%)
Frame = +2
Query: 323 GTSPLHLAAQYGHYSTAEVLLRAGVSRDARTKVDRTPLHMAAADGHAHIVELLVRNGADV 502
G +PLH+A++ G+ +LL G + RTK + TPLH AA +GH I E+L+ +GA +
Sbjct: 272 GITPLHIASRRGNVIMVRLLLDRGAQIETRTKDELTPLHCAARNGHVRISEILLDHGAPI 331
Query: 503 NAKDMLKMTALHWATEHHHRDVVELLIKYGADV 601
AK ++ +H A + H D V LL++Y A++
Sbjct: 332 QAKTKNGLSPIHMAAQGDHLDCVRLLLQYNAEI 364
Score = 74.7 bits (182), Expect = 1e-13
Identities = 48/147 (32%), Positives = 76/147 (51%), Gaps = 1/147 (0%)
Frame = +2
Query: 248 AARKGQDDEVRTLMANGA-PFTTDWLGTSPLHLAAQYGHYSTAEVLLRAGVSRDARTKVD 424
AA G + L+ GA P + G +PLH+A + H E+LL+ G S DA T+
Sbjct: 378 AAHCGHHRVAKVLLDKGAKPNSRALNGFTPLHIACKKNHIRVMELLLKTGASIDAVTESG 437
Query: 425 RTPLHMAAADGHAHIVELLVRNGADVNAKDMLKMTALHWATEHHHRDVVELLIKYGADVH 604
TPLH+A+ GH IV+ L++ GA N ++ T LH A H +V + L++ A +
Sbjct: 438 LTPLHVASFMGHLPIVKNLLQRGASPNVSNVKVETPLHMAARAGHTEVAKYLLQNKAKAN 497
Query: 605 AFSKFDKSAFDIALEKNNAEILVILQE 685
A +K D++ A + ++ +L E
Sbjct: 498 AKAKDDQTPLHCAARIGHTGMVKLLLE 524
Score = 74.3 bits (181), Expect = 1e-13
Identities = 61/199 (30%), Positives = 97/199 (48%), Gaps = 5/199 (2%)
Frame = +2
Query: 248 AARKGQDDEVRTLMANGAPF---TTDWLGTSPLHLAAQYGHYSTAEVLLRAGVSRDARTK 418
AA+ D VR L+ A T D L +PLH+AA GH+ A+VLL G ++R
Sbjct: 345 AAQGDHLDCVRLLLQYNAEIDDITLDHL--TPLHVAAHCGHHRVAKVLLDKGAKPNSRAL 402
Query: 419 VDRTPLHMAAADGHAHIVELLVRNGADVNAKDMLKMTALHWATEHHHRDVVELLIKYGAD 598
TPLH+A H ++ELL++ GA ++A +T LH A+ H +V+ L++ GA
Sbjct: 403 NGFTPLHIACKKNHIRVMELLLKTGASIDAVTESGLTPLHVASFMGHLPIVKNLLQRGAS 462
Query: 599 VHAFSKFDKSAFDIALEKNNAEILVILQEAMQNQVNANPERANSVT--MATPFIFTSGEV 772
+ + ++ +A + E+ L +QN+ AN + + T I +G V
Sbjct: 463 PNVSNVKVETPLHMAARAGHTEVAKYL---LQNKAKANAKAKDDQTPLHCAARIGHTGMV 519
Query: 773 VNLASLVNSANTKTTSGNS 829
L S N TT+G++
Sbjct: 520 KLLLENGASPNLATTAGHT 538
Score = 73.9 bits (180), Expect = 2e-13
Identities = 53/168 (31%), Positives = 84/168 (50%), Gaps = 1/168 (0%)
Frame = +2
Query: 248 AARKGQDDEVRTLMANGAPFTTDWL-GTSPLHLAAQYGHYSTAEVLLRAGVSRDARTKVD 424
AAR G L+ +GAP G SP+H+AAQ H +LL+ D T
Sbjct: 312 AARNGHVRISEILLDHGAPIQAKTKNGLSPIHMAAQGDHLDCVRLLLQYNAEIDDITLDH 371
Query: 425 RTPLHMAAADGHAHIVELLVRNGADVNAKDMLKMTALHWATEHHHRDVVELLIKYGADVH 604
TPLH+AA GH + ++L+ GA N++ + T LH A + +H V+ELL+K GA +
Sbjct: 372 LTPLHVAAHCGHHRVAKVLLDKGAKPNSRALNGFTPLHIACKKNHIRVMELLLKTGASID 431
Query: 605 AFSKFDKSAFDIALEKNNAEILVILQEAMQNQVNANPERANSVTMATP 748
A ++ + +A + L I++ +Q + N ++V + TP
Sbjct: 432 AVTESGLTPLHVASFMGH---LPIVKNLLQRGASPN---VSNVKVETP 473
Score = 72.8 bits (177), Expect = 4e-13
Identities = 47/145 (32%), Positives = 76/145 (52%), Gaps = 1/145 (0%)
Frame = +2
Query: 248 AARKGQDDEVRTLMANGAPFTTDWLGT-SPLHLAAQYGHYSTAEVLLRAGVSRDARTKVD 424
A+R+G VR L+ GA T +PLH AA+ GH +E+LL G A+TK
Sbjct: 279 ASRRGNVIMVRLLLDRGAQIETRTKDELTPLHCAARNGHVRISEILLDHGAPIQAKTKNG 338
Query: 425 RTPLHMAAADGHAHIVELLVRNGADVNAKDMLKMTALHWATEHHHRDVVELLIKYGADVH 604
+P+HMAA H V LL++ A+++ + +T LH A H V ++L+ GA +
Sbjct: 339 LSPIHMAAQGDHLDCVRLLLQYNAEIDDITLDHLTPLHVAAHCGHHRVAKVLLDKGAKPN 398
Query: 605 AFSKFDKSAFDIALEKNNAEILVIL 679
+ + + IA +KN+ ++ +L
Sbjct: 399 SRALNGFTPLHIACKKNHIRVMELL 423
Score = 71.6 bits (174), Expect = 9e-13
Identities = 47/155 (30%), Positives = 75/155 (48%), Gaps = 1/155 (0%)
Frame = +2
Query: 275 VRTLMANGA-PFTTDWLGTSPLHLAAQYGHYSTAEVLLRAGVSRDARTKVDRTPLHMAAA 451
V+ L+ GA P ++ +PLH+AA+ GH A+ LL+ +A+ K D+TPLH AA
Sbjct: 453 VKNLLQRGASPNVSNVKVETPLHMAARAGHTEVAKYLLQNKAKANAKAKDDQTPLHCAAR 512
Query: 452 DGHAHIVELLVRNGADVNAKDMLKMTALHWATEHHHRDVVELLIKYGADVHAFSKFDKSA 631
GH +V+LL+ NGA N T LH A H D L++ A +K +
Sbjct: 513 IGHTGMVKLLLENGASPNLATTAGHTPLHTAAREGHVDTALALLEKEASQACMTKKGFTP 572
Query: 632 FDIALEKNNAEILVILQEAMQNQVNANPERANSVT 736
+A + + +L +++ + N N +T
Sbjct: 573 LHVAAKYGKVRLAELL---LEHDAHPNAAGKNGLT 604
Score = 70.1 bits (170), Expect = 3e-12
Identities = 42/143 (29%), Positives = 77/143 (53%), Gaps = 4/143 (2%)
Frame = +2
Query: 263 QDDEVRT----LMANGAPFTTDWLGTSPLHLAAQYGHYSTAEVLLRAGVSRDARTKVDRT 430
++D+ RT L + P G +PLH+AA Y + + A++LL G S + + T
Sbjct: 215 RNDDTRTAAVLLQNDPNPDVLSKTGFTPLHIAAHYENLNVAQLLLNRGASVNFTPQNGIT 274
Query: 431 PLHMAAADGHAHIVELLVRNGADVNAKDMLKMTALHWATEHHHRDVVELLIKYGADVHAF 610
PLH+A+ G+ +V LL+ GA + + ++T LH A + H + E+L+ +GA + A
Sbjct: 275 PLHIASRRGNVIMVRLLLDRGAQIETRTKDELTPLHCAARNGHVRISEILLDHGAPIQAK 334
Query: 611 SKFDKSAFDIALEKNNAEILVIL 679
+K S +A + ++ + + +L
Sbjct: 335 TKNGLSPIHMAAQGDHLDCVRLL 357
Score = 67.8 bits (164), Expect = 1e-11
Identities = 40/126 (31%), Positives = 62/126 (49%)
Frame = +2
Query: 323 GTSPLHLAAQYGHYSTAEVLLRAGVSRDARTKVDRTPLHMAAADGHAHIVELLVRNGADV 502
G +PLH+A+ GH + LL+ G S + TPLHMAA GH + + L++N A
Sbjct: 437 GLTPLHVASFMGHLPIVKNLLQRGASPNVSNVKVETPLHMAARAGHTEVAKYLLQNKAKA 496
Query: 503 NAKDMLKMTALHWATEHHHRDVVELLIKYGADVHAFSKFDKSAFDIALEKNNAEILVILQ 682
NAK T LH A H +V+LL++ GA + + + A + + + + L
Sbjct: 497 NAKAKDDQTPLHCAARIGHTGMVKLLLENGASPNLATTAGHTPLHTAAREGHVDTALALL 556
Query: 683 EAMQNQ 700
E +Q
Sbjct: 557 EKEASQ 562
Score = 67.8 bits (164), Expect = 1e-11
Identities = 50/166 (30%), Positives = 81/166 (48%), Gaps = 3/166 (1%)
Frame = +2
Query: 248 AARKGQDDEVRTLM---ANGAPFTTDWLGTSPLHLAAQYGHYSTAEVLLRAGVSRDARTK 418
AAR+G D L+ A+ A T G +PLH+AA+YG AE+LL +A K
Sbjct: 543 AAREGHVDTALALLEKEASQACMTKK--GFTPLHVAAKYGKVRLAELLLEHDAHPNAAGK 600
Query: 419 VDRTPLHMAAADGHAHIVELLVRNGADVNAKDMLKMTALHWATEHHHRDVVELLIKYGAD 598
TPLH+A + IV+LL+ G ++ T LH A + + +V L++YG
Sbjct: 601 NGLTPLHVAVHHNNLDIVKLLLPRGGSPHSPAWNGYTPLHIAAKQNQIEVARSLLQYGGS 660
Query: 599 VHAFSKFDKSAFDIALEKNNAEILVILQEAMQNQVNANPERANSVT 736
+A S + +A ++ + E++ +L + Q N N + +T
Sbjct: 661 ANAESVQGVTPLHLAAQEGHTEMVALL---LSKQANGNLGNKSGLT 703
Score = 62.0 bits (149), Expect = 7e-10
Identities = 48/162 (29%), Positives = 74/162 (45%)
Frame = +2
Query: 308 TTDWLGTSPLHLAAQYGHYSTAEVLLRAGVSRDARTKVDRTPLHMAAADGHAHIVELLVR 487
TT G + LH+AA G L+ G + +A+++ TPL+MAA + H +V+ L+
Sbjct: 106 TTTKKGNTALHIAALAGQDEVVRELVNYGANVNAQSQKGFTPLYMAAQENHLEVVKFLLE 165
Query: 488 NGADVNAKDMLKMTALHWATEHHHRDVVELLIKYGADVHAFSKFDKSAFDIALEKNNAEI 667
NGA+ N T L A + H +VV LI YG K A IA ++
Sbjct: 166 NGANQNVATEDGFTPLAVALQQGHENVVAHLINYGTK----GKVRLPALHIAARNDDTRT 221
Query: 668 LVILQEAMQNQVNANPERANSVTMATPFIFTSGEVVNLASLV 793
+L +QN + NP+ + I E +N+A L+
Sbjct: 222 AAVL---LQN--DPNPDVLSKTGFTPLHIAAHYENLNVAQLL 258
Score = 58.9 bits (141), Expect = 6e-09
Identities = 33/90 (36%), Positives = 49/90 (54%)
Frame = +2
Query: 311 TDWLGTSPLHLAAQYGHYSTAEVLLRAGVSRDARTKVDRTPLHMAAADGHAHIVELLVRN 490
T +G +PLH+A+ YG+ + LL+ +A+TK+ +PLH AA GH IV LL++N
Sbjct: 730 TTRMGYTPLHVASHYGNIKLVKFLLQHQADVNAKTKLGYSPLHQAAQQGHTDIVTLLLKN 789
Query: 491 GADVNAKDMLKMTALHWATEHHHRDVVELL 580
GA N T L A + V ++L
Sbjct: 790 GASPNEVSSNGTTPLAIAKRLGYISVTDVL 819
Score = 58.2 bits (139), Expect = 1e-08
Identities = 44/147 (29%), Positives = 71/147 (48%)
Frame = +2
Query: 239 LLEAARKGQDDEVRTLMANGAPFTTDWLGTSPLHLAAQYGHYSTAEVLLRAGVSRDARTK 418
L A ++G ++ V L+ G T + LH+AA+ TA VLL+ + D +K
Sbjct: 181 LAVALQQGHENVVAHLINYG---TKGKVRLPALHIAARNDDTRTAAVLLQNDPNPDVLSK 237
Query: 419 VDRTPLHMAAADGHAHIVELLVRNGADVNAKDMLKMTALHWATEHHHRDVVELLIKYGAD 598
TPLH+AA + ++ +LL+ GA VN +T LH A+ + +V LL+ GA
Sbjct: 238 TGFTPLHIAAHYENLNVAQLLLNRGASVNFTPQNGITPLHIASRRGNVIMVRLLLDRGAQ 297
Query: 599 VHAFSKFDKSAFDIALEKNNAEILVIL 679
+ +K + + A + I IL
Sbjct: 298 IETRTKDELTPLHCAARNGHVRISEIL 324
Score = 48.5 bits (114), Expect = 8e-06
Identities = 36/119 (30%), Positives = 58/119 (48%)
Frame = +2
Query: 344 AAQYGHYSTAEVLLRAGVSRDARTKVDRTPLHMAAADGHAHIVELLVRNGADVNAKDMLK 523
AA+ G+ A LR GV + + LH+A+ +GH +V L+ +
Sbjct: 52 AARSGNLDKALDHLRNGVDINTCNQNGLNGLHLASKEGHVKMVVELLHKEIILETTTKKG 111
Query: 524 MTALHWATEHHHRDVVELLIKYGADVHAFSKFDKSAFDIALEKNNAEILVILQEAMQNQ 700
TALH A +VV L+ YGA+V+A S+ + +A ++N+ E++ L E NQ
Sbjct: 112 NTALHIAALAGQDEVVRELVNYGANVNAQSQKGFTPLYMAAQENHLEVVKFLLENGANQ 170
Database: RefSeq49_MP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 15,617,559
Number of sequences in database: 30,036
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 30036
Number of Hits to DB: 37,138,006
Number of extensions: 1033451
Number of successful extensions: 4588
Number of sequences better than 1.0e-05: 162
Number of HSP's gapped: 3949
Number of HSP's successfully gapped: 626
Length of query: 345
Length of database: 15,617,559
Length adjustment: 102
Effective length of query: 243
Effective length of database: 12,553,887
Effective search space: 3050594541
Effective search space used: 3050594541
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)
Search to RefSeqHP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-012619
(1035 letters)
Database: RefSeq49_HP.fasta
32,964 sequences; 18,297,164 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_653219.1| GA-binding protein subunit beta-2 [Homo sapiens]. 490 e-139
Alignment gi|NP_005245.2| GA-binding protein subunit beta-1 isoform beta ... 374 e-104
Alignment gi|NP_002032.2| GA-binding protein subunit beta-1 isoform gamma... 374 e-104
Alignment gi|NP_057738.1| GA-binding protein subunit beta-1 isoform beta ... 372 e-103
Alignment gi|NP_852092.1| GA-binding protein subunit beta-1 isoform gamma... 372 e-103
Alignment gi|NP_057739.1| GA-binding protein subunit beta-1 isoform gamma... 372 e-103
Alignment gi|NP_079511.1| tankyrase-2 [Homo sapiens]. 95 9e-20
Alignment gi|NP_001229742.1| ankyrin repeat domain-containing protein 6 i... 93 5e-19
Alignment gi|NP_055757.3| ankyrin repeat domain-containing protein 6 isof... 93 5e-19
Alignment gi|NP_001229740.1| ankyrin repeat domain-containing protein 6 i... 93 5e-19
>ref|NP_653219.1| GA-binding protein subunit beta-2 [Homo sapiens].
Length = 448
Score = 490 bits (1262), Expect = e-139
Identities = 259/316 (81%), Positives = 268/316 (84%), Gaps = 42/316 (13%)
Frame = +2
Query: 212 MSLVDLGKRLLEAARKGQDDEVRTLMANGAPFTTDWLGTSPLHLAAQYGHYSTAEVLLRA 391
MSLVDLGKRLLEAARKGQDDEVRTLMANGAPFTTDWLGTSPLHLAAQYGHYSTAEVLLRA
Sbjct: 1 MSLVDLGKRLLEAARKGQDDEVRTLMANGAPFTTDWLGTSPLHLAAQYGHYSTAEVLLRA 60
Query: 392 GVSRDARTKVDRTPLHMAAADGHAHIVELLVRNGADVNAKDMLKMTALHWATEHHHRDVV 571
GVSRDARTKVDRTPLHMAAADGHAHIVELLVRNGADVNAKDMLKMTALHWATE HHRDVV
Sbjct: 61 GVSRDARTKVDRTPLHMAAADGHAHIVELLVRNGADVNAKDMLKMTALHWATERHHRDVV 120
Query: 572 ELLIKYGADVHAFSKFDKSAFDIALEKNNAEILVILQEAMQNQVNANPERANSVT----M 739
ELLIKYGADVHAFSKFDKSAFDIALEKNNAEILVILQEAMQNQVN NPERAN VT M
Sbjct: 121 ELLIKYGADVHAFSKFDKSAFDIALEKNNAEILVILQEAMQNQVNVNPERANPVTDPVSM 180
Query: 740 ATPFIFTSGEVVNLASLVNSANTKTTSG-------------------------------- 823
A PFIFTSGEVVNLASL++S NTKTTSG
Sbjct: 181 AAPFIFTSGEVVNLASLISSTNTKTTSGDPHASTVQFSNSTTSVLATLAALAEASVPLSN 240
Query: 824 ------NSEEIIDGNSVDSSIQQVVGSGGQRVITIVTDGVPLGNIQAAVPTGGIGQPFIV 985
N+EEII+GNSVDSSIQQV+GSGGQRVITIVTDGVPLGNIQ ++PTGGIGQPFIV
Sbjct: 241 SHRATANTEEIIEGNSVDSSIQQVMGSGGQRVITIVTDGVPLGNIQTSIPTGGIGQPFIV 300
Query: 986 TMQDGQQVLTVPAGQV 1033
T+QDGQQVLTVPAG+V
Sbjct: 301 TVQDGQQVLTVPAGKV 316
>ref|NP_005245.2| GA-binding protein subunit beta-1 isoform beta 1 [Homo sapiens].
Length = 395
Score = 374 bits (961), Expect = e-104
Identities = 203/316 (64%), Positives = 235/316 (74%), Gaps = 42/316 (13%)
Frame = +2
Query: 212 MSLVDLGKRLLEAARKGQDDEVRTLMANGAPFTTDWLGTSPLHLAAQYGHYSTAEVLLRA 391
MSLVDLGK+LLEAAR GQDDEVR LMANGAPFTTDWLGTSPLHLAAQYGHYST EVLLRA
Sbjct: 1 MSLVDLGKKLLEAARAGQDDEVRILMANGAPFTTDWLGTSPLHLAAQYGHYSTTEVLLRA 60
Query: 392 GVSRDARTKVDRTPLHMAAADGHAHIVELLVRNGADVNAKDMLKMTALHWATEHHHRDVV 571
GVSRDARTKVDRTPLHMAA++GHA IVE+L+++GADVNAKDMLKMTALHWATEH+H++VV
Sbjct: 61 GVSRDARTKVDRTPLHMAASEGHASIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVV 120
Query: 572 ELLIKYGADVHAFSKFDKSAFDIALEKNNAEILVILQEAMQNQVNANPERANSVTM--AT 745
ELLIKYGADVH SKF K+AFDI+++ N ++ ILQ AMQNQ+N NPE ++VT+ AT
Sbjct: 121 ELLIKYGADVHTQSKFCKTAFDISIDNGNEDLAEILQIAMQNQINTNPESPDTVTIHAAT 180
Query: 746 P-FIFTSGEVVNLASLVNSANTKTTS----------GNS--------------------- 829
P FI G VVNL LV+S N+ + GNS
Sbjct: 181 PQFIIGPGGVVNLTGLVSSENSSKATDETGVSAVQFGNSSTSVLATLAALAEASAPLSNS 240
Query: 830 --------EEIIDGNSVDSSIQQVVGSGGQRVITIVTDGVPLGNIQAAVPTGGIGQPFIV 985
EE++ SVD +IQQVV SGGQ+VITIVTDG+ LGN+ ++PT GIGQP IV
Sbjct: 241 SETPVVATEEVVTAESVDGAIQQVVSSGGQQVITIVTDGIQLGNLH-SIPTSGIGQPIIV 299
Query: 986 TMQDGQQVLTVPAGQV 1033
TM DGQQVLTVPA +
Sbjct: 300 TMPDGQQVLTVPATDI 315
>ref|NP_002032.2| GA-binding protein subunit beta-1 isoform gamma 1 [Homo sapiens].
Length = 360
Score = 374 bits (961), Expect = e-104
Identities = 203/316 (64%), Positives = 235/316 (74%), Gaps = 42/316 (13%)
Frame = +2
Query: 212 MSLVDLGKRLLEAARKGQDDEVRTLMANGAPFTTDWLGTSPLHLAAQYGHYSTAEVLLRA 391
MSLVDLGK+LLEAAR GQDDEVR LMANGAPFTTDWLGTSPLHLAAQYGHYST EVLLRA
Sbjct: 1 MSLVDLGKKLLEAARAGQDDEVRILMANGAPFTTDWLGTSPLHLAAQYGHYSTTEVLLRA 60
Query: 392 GVSRDARTKVDRTPLHMAAADGHAHIVELLVRNGADVNAKDMLKMTALHWATEHHHRDVV 571
GVSRDARTKVDRTPLHMAA++GHA IVE+L+++GADVNAKDMLKMTALHWATEH+H++VV
Sbjct: 61 GVSRDARTKVDRTPLHMAASEGHASIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVV 120
Query: 572 ELLIKYGADVHAFSKFDKSAFDIALEKNNAEILVILQEAMQNQVNANPERANSVTM--AT 745
ELLIKYGADVH SKF K+AFDI+++ N ++ ILQ AMQNQ+N NPE ++VT+ AT
Sbjct: 121 ELLIKYGADVHTQSKFCKTAFDISIDNGNEDLAEILQIAMQNQINTNPESPDTVTIHAAT 180
Query: 746 P-FIFTSGEVVNLASLVNSANTKTTS----------GNS--------------------- 829
P FI G VVNL LV+S N+ + GNS
Sbjct: 181 PQFIIGPGGVVNLTGLVSSENSSKATDETGVSAVQFGNSSTSVLATLAALAEASAPLSNS 240
Query: 830 --------EEIIDGNSVDSSIQQVVGSGGQRVITIVTDGVPLGNIQAAVPTGGIGQPFIV 985
EE++ SVD +IQQVV SGGQ+VITIVTDG+ LGN+ ++PT GIGQP IV
Sbjct: 241 SETPVVATEEVVTAESVDGAIQQVVSSGGQQVITIVTDGIQLGNLH-SIPTSGIGQPIIV 299
Query: 986 TMQDGQQVLTVPAGQV 1033
TM DGQQVLTVPA +
Sbjct: 300 TMPDGQQVLTVPATDI 315
>ref|NP_057738.1| GA-binding protein subunit beta-1 isoform beta 2 [Homo sapiens].
Length = 383
Score = 372 bits (956), Expect = e-103
Identities = 201/306 (65%), Positives = 233/306 (76%), Gaps = 32/306 (10%)
Frame = +2
Query: 212 MSLVDLGKRLLEAARKGQDDEVRTLMANGAPFTTDWLGTSPLHLAAQYGHYSTAEVLLRA 391
MSLVDLGK+LLEAAR GQDDEVR LMANGAPFTTDWLGTSPLHLAAQYGHYST EVLLRA
Sbjct: 1 MSLVDLGKKLLEAARAGQDDEVRILMANGAPFTTDWLGTSPLHLAAQYGHYSTTEVLLRA 60
Query: 392 GVSRDARTKVDRTPLHMAAADGHAHIVELLVRNGADVNAKDMLKMTALHWATEHHHRDVV 571
GVSRDARTKVDRTPLHMAA++GHA IVE+L+++GADVNAKDMLKMTALHWATEH+H++VV
Sbjct: 61 GVSRDARTKVDRTPLHMAASEGHASIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVV 120
Query: 572 ELLIKYGADVHAFSKFDKSAFDIALEKNNAEILVILQEAMQNQVNANPERANSVTM--AT 745
ELLIKYGADVH SKF K+AFDI+++ N ++ ILQ AMQNQ+N NPE ++VT+ AT
Sbjct: 121 ELLIKYGADVHTQSKFCKTAFDISIDNGNEDLAEILQIAMQNQINTNPESPDTVTIHAAT 180
Query: 746 P-FIFTSGEVVNL-----------------------------ASLVNSANTKTTSGNSEE 835
P FI G VVNL A L NS+ T + +EE
Sbjct: 181 PQFIIGPGGVVNLTDETGVSAVQFGNSSTSVLATLAALAEASAPLSNSSETPVVA--TEE 238
Query: 836 IIDGNSVDSSIQQVVGSGGQRVITIVTDGVPLGNIQAAVPTGGIGQPFIVTMQDGQQVLT 1015
++ SVD +IQQVV SGGQ+VITIVTDG+ LGN+ ++PT GIGQP IVTM DGQQVLT
Sbjct: 239 VVTAESVDGAIQQVVSSGGQQVITIVTDGIQLGNLH-SIPTSGIGQPIIVTMPDGQQVLT 297
Query: 1016 VPAGQV 1033
VPA +
Sbjct: 298 VPATDI 303
>ref|NP_852092.1| GA-binding protein subunit beta-1 isoform gamma 2 [Homo sapiens].
Length = 348
Score = 372 bits (956), Expect = e-103
Identities = 201/306 (65%), Positives = 233/306 (76%), Gaps = 32/306 (10%)
Frame = +2
Query: 212 MSLVDLGKRLLEAARKGQDDEVRTLMANGAPFTTDWLGTSPLHLAAQYGHYSTAEVLLRA 391
MSLVDLGK+LLEAAR GQDDEVR LMANGAPFTTDWLGTSPLHLAAQYGHYST EVLLRA
Sbjct: 1 MSLVDLGKKLLEAARAGQDDEVRILMANGAPFTTDWLGTSPLHLAAQYGHYSTTEVLLRA 60
Query: 392 GVSRDARTKVDRTPLHMAAADGHAHIVELLVRNGADVNAKDMLKMTALHWATEHHHRDVV 571
GVSRDARTKVDRTPLHMAA++GHA IVE+L+++GADVNAKDMLKMTALHWATEH+H++VV
Sbjct: 61 GVSRDARTKVDRTPLHMAASEGHASIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVV 120
Query: 572 ELLIKYGADVHAFSKFDKSAFDIALEKNNAEILVILQEAMQNQVNANPERANSVTM--AT 745
ELLIKYGADVH SKF K+AFDI+++ N ++ ILQ AMQNQ+N NPE ++VT+ AT
Sbjct: 121 ELLIKYGADVHTQSKFCKTAFDISIDNGNEDLAEILQIAMQNQINTNPESPDTVTIHAAT 180
Query: 746 P-FIFTSGEVVNL-----------------------------ASLVNSANTKTTSGNSEE 835
P FI G VVNL A L NS+ T + +EE
Sbjct: 181 PQFIIGPGGVVNLTDETGVSAVQFGNSSTSVLATLAALAEASAPLSNSSETPVVA--TEE 238
Query: 836 IIDGNSVDSSIQQVVGSGGQRVITIVTDGVPLGNIQAAVPTGGIGQPFIVTMQDGQQVLT 1015
++ SVD +IQQVV SGGQ+VITIVTDG+ LGN+ ++PT GIGQP IVTM DGQQVLT
Sbjct: 239 VVTAESVDGAIQQVVSSGGQQVITIVTDGIQLGNLH-SIPTSGIGQPIIVTMPDGQQVLT 297
Query: 1016 VPAGQV 1033
VPA +
Sbjct: 298 VPATDI 303
>ref|NP_057739.1| GA-binding protein subunit beta-1 isoform gamma 2 [Homo sapiens].
Length = 348
Score = 372 bits (956), Expect = e-103
Identities = 201/306 (65%), Positives = 233/306 (76%), Gaps = 32/306 (10%)
Frame = +2
Query: 212 MSLVDLGKRLLEAARKGQDDEVRTLMANGAPFTTDWLGTSPLHLAAQYGHYSTAEVLLRA 391
MSLVDLGK+LLEAAR GQDDEVR LMANGAPFTTDWLGTSPLHLAAQYGHYST EVLLRA
Sbjct: 1 MSLVDLGKKLLEAARAGQDDEVRILMANGAPFTTDWLGTSPLHLAAQYGHYSTTEVLLRA 60
Query: 392 GVSRDARTKVDRTPLHMAAADGHAHIVELLVRNGADVNAKDMLKMTALHWATEHHHRDVV 571
GVSRDARTKVDRTPLHMAA++GHA IVE+L+++GADVNAKDMLKMTALHWATEH+H++VV
Sbjct: 61 GVSRDARTKVDRTPLHMAASEGHASIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVV 120
Query: 572 ELLIKYGADVHAFSKFDKSAFDIALEKNNAEILVILQEAMQNQVNANPERANSVTM--AT 745
ELLIKYGADVH SKF K+AFDI+++ N ++ ILQ AMQNQ+N NPE ++VT+ AT
Sbjct: 121 ELLIKYGADVHTQSKFCKTAFDISIDNGNEDLAEILQIAMQNQINTNPESPDTVTIHAAT 180
Query: 746 P-FIFTSGEVVNL-----------------------------ASLVNSANTKTTSGNSEE 835
P FI G VVNL A L NS+ T + +EE
Sbjct: 181 PQFIIGPGGVVNLTDETGVSAVQFGNSSTSVLATLAALAEASAPLSNSSETPVVA--TEE 238
Query: 836 IIDGNSVDSSIQQVVGSGGQRVITIVTDGVPLGNIQAAVPTGGIGQPFIVTMQDGQQVLT 1015
++ SVD +IQQVV SGGQ+VITIVTDG+ LGN+ ++PT GIGQP IVTM DGQQVLT
Sbjct: 239 VVTAESVDGAIQQVVSSGGQQVITIVTDGIQLGNLH-SIPTSGIGQPIIVTMPDGQQVLT 297
Query: 1016 VPAGQV 1033
VPA +
Sbjct: 298 VPATDI 303
>ref|NP_079511.1| tankyrase-2 [Homo sapiens].
Length = 1166
Score = 95.1 bits (235), Expect = 9e-20
Identities = 54/137 (39%), Positives = 79/137 (57%), Gaps = 2/137 (1%)
Frame = +2
Query: 239 LLEAARKGQDDEVRTLMA--NGAPFTTDWLGTSPLHLAAQYGHYSTAEVLLRAGVSRDAR 412
LLE+AR G ++++ L+ N +D ++PLHLAA Y ++LL+ G A+
Sbjct: 181 LLESARSGNEEKMMALLTPLNVNCHASDGRKSTPLHLAAGYNRVKIVQLLLQHGADVHAK 240
Query: 413 TKVDRTPLHMAAADGHAHIVELLVRNGADVNAKDMLKMTALHWATEHHHRDVVELLIKYG 592
K D PLH A + GH + ELLV++GA VNA D+ + T LH A + +V LL+ YG
Sbjct: 241 DKGDLVPLHNACSYGHYEVTELLVKHGACVNAMDLWQFTPLHEAASKNRVEVCSLLLSYG 300
Query: 593 ADVHAFSKFDKSAFDIA 643
AD + +KSA D+A
Sbjct: 301 ADPTLLNCHNKSAIDLA 317
Score = 84.3 bits (207), Expect = 2e-16
Identities = 69/240 (28%), Positives = 112/240 (46%), Gaps = 22/240 (9%)
Frame = +2
Query: 239 LLEAARKGQDDEVRTLMANGAPFTTDWLG--TSPLHLAAQYGHYSTAEVLLRAGVSRDAR 412
LL+AA+KG V+ L + D G ++PLHLAA Y + AE LL+ G +A+
Sbjct: 649 LLDAAKKGCLARVKKLSSPDNVNCRDTQGRHSTPLHLAAGYNNLEVAEYLLQHGADVNAQ 708
Query: 413 TKVDRTPLHMAAADGHAHIVELLVRNGADVNAKDMLKMTALHWATEHHHRDVVELLIKYG 592
K PLH AA+ GH + LL++ A VNA D T LH A + + LL+ +G
Sbjct: 709 DKGGLIPLHNAASYGHVDVAALLIKYNACVNATDKWAFTPLHEAAQKGRTQLCALLLAHG 768
Query: 593 ADVHAFSKFDKSAFDIALEKNNAEILVILQE--------------------AMQNQVNAN 712
AD ++ ++ D+ + + +L A + +++
Sbjct: 769 ADPTLKNQEGQTPLDLVSADDVSALLTAAMPPSALPSCYKPQVLNGVRSPGATADALSSG 828
Query: 713 PERANSVTMATPFIFTSGEVVNLASLVNSANTKTTSGNSEEIIDGNSVDSSIQQVVGSGG 892
P +S++ A+ SG L+S+V+S+ T+ S ++ + G VD SI Q V + G
Sbjct: 829 PSSPSSLSAASSLDNLSGSFSELSSVVSSSGTEGASSLEKKEVPG--VDFSITQFVRNLG 886
Score = 81.3 bits (199), Expect = 1e-15
Identities = 49/133 (36%), Positives = 72/133 (54%), Gaps = 2/133 (1%)
Frame = +2
Query: 206 IKMSLVDLGKRLLEAARKGQDDEVRTLMANGAPFTTDWLG--TSPLHLAAQYGHYSTAEV 379
I + + ++LLEAA+ G + V+ L + D G ++PLH AA Y S E
Sbjct: 485 ISLGNSEADRQLLEAAKAGDVETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSVVEY 544
Query: 380 LLRAGVSRDARTKVDRTPLHMAAADGHAHIVELLVRNGADVNAKDMLKMTALHWATEHHH 559
LL+ G A+ K PLH A + GH + ELLV++GA VN D+ K T LH A
Sbjct: 545 LLQHGADVHAKDKGGLVPLHNACSYGHYEVAELLVKHGAVVNVADLWKFTPLHEAAAKGK 604
Query: 560 RDVVELLIKYGAD 598
++ +LL+++GAD
Sbjct: 605 YEICKLLLQHGAD 617
Score = 80.9 bits (198), Expect = 2e-15
Identities = 50/139 (35%), Positives = 74/139 (53%), Gaps = 2/139 (1%)
Frame = +2
Query: 233 KRLLEAARKGQDDEVRTLMANGAPFTTDWLG--TSPLHLAAQYGHYSTAEVLLRAGVSRD 406
+ L EA R G + V+ L+ + D G ++PLH AA +G E LL+ G +
Sbjct: 26 RELFEACRNGDVERVKRLVTPEKVNSRDTAGRKSTPLHFAAGFGRKDVVEYLLQNGANVQ 85
Query: 407 ARTKVDRTPLHMAAADGHAHIVELLVRNGADVNAKDMLKMTALHWATEHHHRDVVELLIK 586
AR PLH A + GHA +V LL+R+GAD NA+D T LH A DV +L++
Sbjct: 86 ARDDGGLIPLHNACSFGHAEVVNLLLRHGADPNARDNWNYTPLHEAAIKGKIDVCIVLLQ 145
Query: 587 YGADVHAFSKFDKSAFDIA 643
+GA+ + ++A D+A
Sbjct: 146 HGAEPTIRNTDGRTALDLA 164
Score = 69.3 bits (168), Expect = 5e-12
Identities = 57/169 (33%), Positives = 80/169 (47%), Gaps = 22/169 (13%)
Frame = +2
Query: 239 LLEAARKGQDDEVRTLMANGA-PFTTDWLGTSPLHLA------AQYGHYSTAEVLLRA-- 391
L EAA KG+ D L+ +GA P + G + L LA G Y E+L A
Sbjct: 128 LHEAAIKGKIDVCIVLLQHGAEPTIRNTDGRTALDLADPSAKAVLTGEYKKDELLESARS 187
Query: 392 -------------GVSRDARTKVDRTPLHMAAADGHAHIVELLVRNGADVNAKDMLKMTA 532
V+ A TPLH+AA IV+LL+++GADV+AKD +
Sbjct: 188 GNEEKMMALLTPLNVNCHASDGRKSTPLHLAAGYNRVKIVQLLLQHGADVHAKDKGDLVP 247
Query: 533 LHWATEHHHRDVVELLIKYGADVHAFSKFDKSAFDIALEKNNAEILVIL 679
LH A + H +V ELL+K+GA V+A + + A KN E+ +L
Sbjct: 248 LHNACSYGHYEVTELLVKHGACVNAMDLWQFTPLHEAASKNRVEVCSLL 296
Score = 67.4 bits (163), Expect = 2e-11
Identities = 52/158 (32%), Positives = 76/158 (48%), Gaps = 4/158 (2%)
Frame = +2
Query: 230 GKRLLEAARKGQDDEVRT-LMANGAPFTTDWLGTSPLHLAAQYGH---YSTAEVLLRAGV 397
G LL+AAR+ ++ L F + LH AA + E+LLR G
Sbjct: 332 GHSLLQAAREADVTRIKKHLSLEMVNFKHPQTHETALHCAAASPYPKRKQICELLLRKGA 391
Query: 398 SRDARTKVDRTPLHMAAADGHAHIVELLVRNGADVNAKDMLKMTALHWATEHHHRDVVEL 577
+ + +TK TPLH+A+ H +VE++V++ A VNA D L T+LH A H L
Sbjct: 392 NINEKTKEFLTPLHVASEKAHNDVVEVVVKHEAKVNALDNLGQTSLHRAAYCGHLQTCRL 451
Query: 578 LIKYGADVHAFSKFDKSAFDIALEKNNAEILVILQEAM 691
L+ YG D + S F AL+ N + +LQE +
Sbjct: 452 LLSYGCDPNIIS---LQGF-TALQMGNENVQQLLQEGI 485
Score = 62.0 bits (149), Expect = 9e-10
Identities = 34/107 (31%), Positives = 57/107 (53%)
Frame = +2
Query: 428 TPLHMAAADGHAHIVELLVRNGADVNAKDMLKMTALHWATEHHHRDVVELLIKYGADVHA 607
TPLH AA G +VE L++NGA+V A+D + LH A H +VV LL+++GAD +A
Sbjct: 60 TPLHFAAGFGRKDVVEYLLQNGANVQARDDGGLIPLHNACSFGHAEVVNLLLRHGADPNA 119
Query: 608 FSKFDKSAFDIALEKNNAEILVILQEAMQNQVNANPERANSVTMATP 748
++ + A K ++ ++L + N + ++ +A P
Sbjct: 120 RDNWNYTPLHEAAIKGKIDVCIVLLQHGAEPTIRNTDGRTALDLADP 166
Score = 59.3 bits (142), Expect = 6e-09
Identities = 37/100 (37%), Positives = 53/100 (53%)
Frame = +2
Query: 428 TPLHMAAADGHAHIVELLVRNGADVNAKDMLKMTALHWATEHHHRDVVELLIKYGADVHA 607
TPLH AA +VE L+++GADV+AKD + LH A + H +V ELL+K+GA V+
Sbjct: 528 TPLHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNACSYGHYEVAELLVKHGAVVNV 587
Query: 608 FSKFDKSAFDIALEKNNAEILVILQEAMQNQVNANPERAN 727
+ + A K EI +L Q A+P + N
Sbjct: 588 ADLWKFTPLHEAAAKGKYEICKLLL-----QHGADPTKKN 622
Score = 54.3 bits (129), Expect = 2e-07
Identities = 33/81 (40%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Frame = +2
Query: 275 VRTLMANGAPF-TTDWLGTSPLHLAAQYGHYSTAEVLLRAGVSRDARTKVDRTPLHMAAA 451
V L+ +GA D G PLH A YGHY AE+L++ G + TPLH AAA
Sbjct: 542 VEYLLQHGADVHAKDKGGLVPLHNACSYGHYEVAELLVKHGAVVNVADLWKFTPLHEAAA 601
Query: 452 DGHAHIVELLVRNGADVNAKD 514
G I +LL+++GAD K+
Sbjct: 602 KGKYEICKLLLQHGADPTKKN 622
>ref|NP_001229742.1| ankyrin repeat domain-containing protein 6 isoform c [Homo
sapiens].
Length = 692
Score = 92.8 bits (229), Expect = 5e-19
Identities = 55/151 (36%), Positives = 82/151 (54%)
Frame = +2
Query: 227 LGKRLLEAARKGQDDEVRTLMANGAPFTTDWLGTSPLHLAAQYGHYSTAEVLLRAGVSRD 406
L +RLL AA KGQ + V L+ GA G +PLHLAA GH ++LL+AG D
Sbjct: 10 LSERLLVAAYKGQTENVVQLINKGARVAVTKHGRTPLHLAANKGHLPVVQILLKAGCDLD 69
Query: 407 ARTKVDRTPLHMAAADGHAHIVELLVRNGADVNAKDMLKMTALHWATEHHHRDVVELLIK 586
+ D+T LH A G+ I+ L+ G ++ +D TALH A+ H +LLIK
Sbjct: 70 VQDDGDQTALHRATVVGNTEIIAALIHEGCALDRQDKDGNTALHEASWHGFSQSAKLLIK 129
Query: 587 YGADVHAFSKFDKSAFDIALEKNNAEILVIL 679
GA+V A +K +A +A + ++++ +L
Sbjct: 130 AGANVLAKNKAGNTALHLACQNSHSQSTRVL 160
Score = 79.0 bits (193), Expect = 7e-15
Identities = 52/169 (30%), Positives = 82/169 (48%), Gaps = 1/169 (0%)
Frame = +2
Query: 239 LLEAARKGQDDEVRTLMANGAP-FTTDWLGTSPLHLAAQYGHYSTAEVLLRAGVSRDART 415
L EA+ G + L+ GA + G + LHLA Q H + VLL AG D +
Sbjct: 112 LHEASWHGFSQSAKLLIKAGANVLAKNKAGNTALHLACQNSHSQSTRVLLLAGSRADLKN 171
Query: 416 KVDRTPLHMAAADGHAHIVELLVRNGADVNAKDMLKMTALHWATEHHHRDVVELLIKYGA 595
T LH+AA H I+ LL+ V+ K+ TALH A +H+ V ++L++ GA
Sbjct: 172 NAGDTCLHVAARYNHLSIIRLLLTAFCSVHEKNQAGDTALHVAAALNHKKVAKILLEAGA 231
Query: 596 DVHAFSKFDKSAFDIALEKNNAEILVILQEAMQNQVNANPERANSVTMA 742
D + ++ + A NN E+ ++L +A Q V+A ++ +A
Sbjct: 232 DTTIVNNAGQTPLETARYHNNPEVALLLTKAPQGSVSAGDTPSSEQAVA 280
Score = 65.5 bits (158), Expect = 8e-11
Identities = 35/122 (28%), Positives = 65/122 (53%)
Frame = +2
Query: 323 GTSPLHLAAQYGHYSTAEVLLRAGVSRDARTKVDRTPLHMAAADGHAHIVELLVRNGADV 502
G + LH A+ +G +A++L++AG + A+ K T LH+A + H+ +L+ G+
Sbjct: 108 GNTALHEASWHGFSQSAKLLIKAGANVLAKNKAGNTALHLACQNSHSQSTRVLLLAGSRA 167
Query: 503 NAKDMLKMTALHWATEHHHRDVVELLIKYGADVHAFSKFDKSAFDIALEKNNAEILVILQ 682
+ K+ T LH A ++H ++ LL+ VH ++ +A +A N+ ++ IL
Sbjct: 168 DLKNNAGDTCLHVAARYNHLSIIRLLLTAFCSVHEKNQAGDTALHVAAALNHKKVAKILL 227
Query: 683 EA 688
EA
Sbjct: 228 EA 229
>ref|NP_055757.3| ankyrin repeat domain-containing protein 6 isoform b [Homo
sapiens].
Length = 722
Score = 92.8 bits (229), Expect = 5e-19
Identities = 55/151 (36%), Positives = 82/151 (54%)
Frame = +2
Query: 227 LGKRLLEAARKGQDDEVRTLMANGAPFTTDWLGTSPLHLAAQYGHYSTAEVLLRAGVSRD 406
L +RLL AA KGQ + V L+ GA G +PLHLAA GH ++LL+AG D
Sbjct: 10 LSERLLVAAYKGQTENVVQLINKGARVAVTKHGRTPLHLAANKGHLPVVQILLKAGCDLD 69
Query: 407 ARTKVDRTPLHMAAADGHAHIVELLVRNGADVNAKDMLKMTALHWATEHHHRDVVELLIK 586
+ D+T LH A G+ I+ L+ G ++ +D TALH A+ H +LLIK
Sbjct: 70 VQDDGDQTALHRATVVGNTEIIAALIHEGCALDRQDKDGNTALHEASWHGFSQSAKLLIK 129
Query: 587 YGADVHAFSKFDKSAFDIALEKNNAEILVIL 679
GA+V A +K +A +A + ++++ +L
Sbjct: 130 AGANVLAKNKAGNTALHLACQNSHSQSTRVL 160
Score = 75.1 bits (183), Expect = 1e-13
Identities = 49/153 (32%), Positives = 75/153 (49%), Gaps = 1/153 (0%)
Frame = +2
Query: 239 LLEAARKGQDDEVRTLMANGAP-FTTDWLGTSPLHLAAQYGHYSTAEVLLRAGVSRDART 415
L EA+ G + L+ GA + G + LHLA Q H + VLL AG D +
Sbjct: 112 LHEASWHGFSQSAKLLIKAGANVLAKNKAGNTALHLACQNSHSQSTRVLLLAGSRADLKN 171
Query: 416 KVDRTPLHMAAADGHAHIVELLVRNGADVNAKDMLKMTALHWATEHHHRDVVELLIKYGA 595
T LH+AA H I+ LL+ V+ K+ TALH A +H+ V ++L++ GA
Sbjct: 172 NAGDTCLHVAARYNHLSIIRLLLTAFCSVHEKNQAGDTALHVAAALNHKKVAKILLEAGA 231
Query: 596 DVHAFSKFDKSAFDIALEKNNAEILVILQEAMQ 694
D + ++ + A NN E+ ++L +A Q
Sbjct: 232 DTTIVNNAGQTPLETARYHNNPEVALLLTKAPQ 264
Score = 65.5 bits (158), Expect = 8e-11
Identities = 35/122 (28%), Positives = 65/122 (53%)
Frame = +2
Query: 323 GTSPLHLAAQYGHYSTAEVLLRAGVSRDARTKVDRTPLHMAAADGHAHIVELLVRNGADV 502
G + LH A+ +G +A++L++AG + A+ K T LH+A + H+ +L+ G+
Sbjct: 108 GNTALHEASWHGFSQSAKLLIKAGANVLAKNKAGNTALHLACQNSHSQSTRVLLLAGSRA 167
Query: 503 NAKDMLKMTALHWATEHHHRDVVELLIKYGADVHAFSKFDKSAFDIALEKNNAEILVILQ 682
+ K+ T LH A ++H ++ LL+ VH ++ +A +A N+ ++ IL
Sbjct: 168 DLKNNAGDTCLHVAARYNHLSIIRLLLTAFCSVHEKNQAGDTALHVAAALNHKKVAKILL 227
Query: 683 EA 688
EA
Sbjct: 228 EA 229
>ref|NP_001229740.1| ankyrin repeat domain-containing protein 6 isoform a [Homo
sapiens].
Length = 727
Score = 92.8 bits (229), Expect = 5e-19
Identities = 55/151 (36%), Positives = 82/151 (54%)
Frame = +2
Query: 227 LGKRLLEAARKGQDDEVRTLMANGAPFTTDWLGTSPLHLAAQYGHYSTAEVLLRAGVSRD 406
L +RLL AA KGQ + V L+ GA G +PLHLAA GH ++LL+AG D
Sbjct: 10 LSERLLVAAYKGQTENVVQLINKGARVAVTKHGRTPLHLAANKGHLPVVQILLKAGCDLD 69
Query: 407 ARTKVDRTPLHMAAADGHAHIVELLVRNGADVNAKDMLKMTALHWATEHHHRDVVELLIK 586
+ D+T LH A G+ I+ L+ G ++ +D TALH A+ H +LLIK
Sbjct: 70 VQDDGDQTALHRATVVGNTEIIAALIHEGCALDRQDKDGNTALHEASWHGFSQSAKLLIK 129
Query: 587 YGADVHAFSKFDKSAFDIALEKNNAEILVIL 679
GA+V A +K +A +A + ++++ +L
Sbjct: 130 AGANVLAKNKAGNTALHLACQNSHSQSTRVL 160
Score = 75.1 bits (183), Expect = 1e-13
Identities = 49/153 (32%), Positives = 75/153 (49%), Gaps = 1/153 (0%)
Frame = +2
Query: 239 LLEAARKGQDDEVRTLMANGAP-FTTDWLGTSPLHLAAQYGHYSTAEVLLRAGVSRDART 415
L EA+ G + L+ GA + G + LHLA Q H + VLL AG D +
Sbjct: 112 LHEASWHGFSQSAKLLIKAGANVLAKNKAGNTALHLACQNSHSQSTRVLLLAGSRADLKN 171
Query: 416 KVDRTPLHMAAADGHAHIVELLVRNGADVNAKDMLKMTALHWATEHHHRDVVELLIKYGA 595
T LH+AA H I+ LL+ V+ K+ TALH A +H+ V ++L++ GA
Sbjct: 172 NAGDTCLHVAARYNHLSIIRLLLTAFCSVHEKNQAGDTALHVAAALNHKKVAKILLEAGA 231
Query: 596 DVHAFSKFDKSAFDIALEKNNAEILVILQEAMQ 694
D + ++ + A NN E+ ++L +A Q
Sbjct: 232 DTTIVNNAGQTPLETARYHNNPEVALLLTKAPQ 264
Score = 65.5 bits (158), Expect = 8e-11
Identities = 35/122 (28%), Positives = 65/122 (53%)
Frame = +2
Query: 323 GTSPLHLAAQYGHYSTAEVLLRAGVSRDARTKVDRTPLHMAAADGHAHIVELLVRNGADV 502
G + LH A+ +G +A++L++AG + A+ K T LH+A + H+ +L+ G+
Sbjct: 108 GNTALHEASWHGFSQSAKLLIKAGANVLAKNKAGNTALHLACQNSHSQSTRVLLLAGSRA 167
Query: 503 NAKDMLKMTALHWATEHHHRDVVELLIKYGADVHAFSKFDKSAFDIALEKNNAEILVILQ 682
+ K+ T LH A ++H ++ LL+ VH ++ +A +A N+ ++ IL
Sbjct: 168 DLKNNAGDTCLHVAARYNHLSIIRLLLTAFCSVHEKNQAGDTALHVAAALNHKKVAKILL 227
Query: 683 EA 688
EA
Sbjct: 228 EA 229
Database: RefSeq49_HP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,297,164
Number of sequences in database: 32,964
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 32964
Number of Hits to DB: 43,730,665
Number of extensions: 1225976
Number of successful extensions: 5823
Number of sequences better than 1.0e-05: 230
Number of HSP's gapped: 4996
Number of HSP's successfully gapped: 882
Length of query: 345
Length of database: 18,297,164
Length adjustment: 103
Effective length of query: 242
Effective length of database: 14,901,872
Effective search space: 3606253024
Effective search space used: 3606253024
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)