Animal-Genome cDNA 20110601C-012635


Search to RefSeqBP_Rel49

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-012635
         (2366 letters)

Database: RefSeq49_BP.fasta 
           33,088 sequences; 17,681,374 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_001159956.1| mast/stem cell growth factor receptor [Bos t...  1045   0.0  
Alignment   gi|NP_001068871.2| macrophage colony-stimulating factor 1 recep...   454   e-127
Alignment   gi|NP_001179274.1| alpha-type platelet-derived growth factor re...   366   e-101
Alignment   gi|XP_002688301.1| PREDICTED: platelet-derived growth factor re...   366   e-101
Alignment   gi|NP_001069364.2| beta-type platelet-derived growth factor rec...   340   3e-93
Alignment   gi|XP_002689337.1| PREDICTED: platelet-derived growth factor re...   340   3e-93
Alignment   gi|XP_001790034.1| PREDICTED: platelet-derived growth factor re...   340   3e-93
Alignment   gi|XP_002691902.1| PREDICTED: fms-related tyrosine kinase 3-lik...   323   6e-88
Alignment   gi|XP_590263.4| PREDICTED: fms-related tyrosine kinase 3-like [...   323   6e-88
Alignment   gi|NP_001178061.2| vascular endothelial growth factor receptor ...   259   1e-68

>ref|NP_001159956.1| mast/stem cell growth factor receptor [Bos taurus].
          Length = 977

 Score = 1045 bits (2702), Expect = 0.0
 Identities = 524/597 (87%), Positives = 531/597 (88%), Gaps = 45/597 (7%)
 Frame = +2

Query: 2    LTRLKGTEGGTYTFLVSNADVNSSVTLNVYVNTKPEILTHDRLMNGMLQCVAAGFPEPTI 181
            LTRLKGTEGGTYTF VSN+DVNSSVT NVYVNTKPEILTHDRL+NGMLQCVAAGFPEPTI
Sbjct: 380  LTRLKGTEGGTYTFHVSNSDVNSSVTFNVYVNTKPEILTHDRLVNGMLQCVAAGFPEPTI 439

Query: 182  DWYFCPGTEQRCSVPVGPVDVQIQNSSVSPFGKLVIHSSIDYSAFKHNGTVECRAYNDVG 361
            DWYFCPGTEQRCSVPVGPVDVQIQNSSVSPFGKLV++S+ID S FKHNGTVECRAYNDVG
Sbjct: 440  DWYFCPGTEQRCSVPVGPVDVQIQNSSVSPFGKLVVYSTIDDSTFKHNGTVECRAYNDVG 499

Query: 362  KSSAFFNFAFK----EQIHAHTLFTPLLIGFVIAAGMMCIIVMILTYKYLQKPMYEVQWK 529
            KSSA FNFAFK    EQIHAHTLFTPLLIGFVIAAG+MCI VMILTYKYLQKPMYEVQWK
Sbjct: 500  KSSASFNFAFKGNSKEQIHAHTLFTPLLIGFVIAAGLMCIFVMILTYKYLQKPMYEVQWK 559

Query: 530  VVEEINGNNYVYIDPTQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAM 709
            VVEEINGNNYVYIDPTQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAM
Sbjct: 560  VVEEINGNNYVYIDPTQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAM 619

Query: 710  TVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDL 889
            TVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDL
Sbjct: 620  TVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDL 679

Query: 890  LNFLRRKRDSFICSKQEDHAEAALYKNLLHSKESSCSDSTNEYMDMKPGVSYVVPTKADK 1069
            LNFLRRKRDSFICSKQEDHAE ALYKNLLHSKESSC+DSTNEYMDMKPGVSYVVPTKADK
Sbjct: 680  LNFLRRKRDSFICSKQEDHAEVALYKNLLHSKESSCNDSTNEYMDMKPGVSYVVPTKADK 739

Query: 1070 RRSARIGSYIERDVTPAIMXXXXXXXXXXXXXSFSYQVAKGMAFLASK------------ 1213
            RRSARIGSYIERDVTPAIM             SFSYQVAKGMAFLASK            
Sbjct: 740  RRSARIGSYIERDVTPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNI 799

Query: 1214 -----------------------------NARLPVKWMAPESIFNCVYTFESDVWSYGIF 1306
                                         NARLPVKWMAPESIFNCVYTFESDVWSYGIF
Sbjct: 800  LLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIF 859

Query: 1307 LWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPVEMYDIMKTCWDADPLKRPTFK 1486
            LWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAP EMYDIMKTCWDADPLKRPTFK
Sbjct: 860  LWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFK 919

Query: 1487 QIVQLIEKQISESTNHIYSNLANCSPHRENPAVDHSVRINSVGSSASSTQPLLVHED 1657
            QIVQLIEKQISESTNHIYSNLANCSPHRENPAVDHSVRINSVGSSASSTQPLLVHED
Sbjct: 920  QIVQLIEKQISESTNHIYSNLANCSPHRENPAVDHSVRINSVGSSASSTQPLLVHED 976


>ref|NP_001068871.2| macrophage colony-stimulating factor 1 receptor [Bos taurus].
          Length = 964

 Score =  454 bits (1167), Expect = e-127
 Identities = 260/607 (42%), Positives = 344/607 (56%), Gaps = 59/607 (9%)
 Frame = +2

Query: 2    LTRLKGTEGGTYTFLVSNADVNSSVTLNVYVNTKPEILTHDRLMNGM--LQCVAAGFPEP 175
            L RLK +E G Y+F   NA    ++T  + +   PE+     L +G   L C A+G+P+P
Sbjct: 366  LPRLKPSEAGLYSFQARNARGEDTLTFELTLLYPPEVEVMWTLSSGSKALLCEASGYPQP 425

Query: 176  TIDWYFCPGTEQRCSVPVGPVDVQIQNSSV---SPFGKLVIHSSIDYSAFKHNGTVECRA 346
             + W  C     RC      + ++  N  V    PF K+ + S +     +HN T ECRA
Sbjct: 426  NVTWVQCSSHTNRCD-KTHVLVLEEPNPDVLRQEPFHKVTVQSLLTPGTLEHNRTYECRA 484

Query: 347  YNDVGKSSAFF---NFAFKEQIHAHTLFTPLLIGFVIAAGMMCIIVMILTYKYLQKPMYE 517
             N +G +S      +     Q     LFTP+L+  +    ++ +++++L YKY QKP YE
Sbjct: 485  QNSMGNTSGALGPISVGASMQPRDEPLFTPVLVACMSIMALLLLLLLLLFYKYKQKPKYE 544

Query: 518  VQWKVVEEINGNNYVYIDPTQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKS 697
            V+WK++E   GN+Y +IDPTQLPY+ KWEFPRN L FGKTLGAGAFGKVVEATA+GL K 
Sbjct: 545  VRWKIIESYEGNSYTFIDPTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKE 604

Query: 698  DAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCC 877
            DA + VAVKMLK +AH  E+EALMSELK++S+LG H NIVNLLGACT GGP LVITEYCC
Sbjct: 605  DAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCC 664

Query: 878  YGDLLNFLRRKRDSFI---CSKQEDHAEAALYKNLLHSKESSCSDS------TNEYMDMK 1030
            YGDLLNFLRRK ++ +    S  +D      YKN+   K+    DS       + Y++M+
Sbjct: 665  YGDLLNFLRRKAEAMLGPSLSPGQDPEAGTGYKNIHLEKKYIRRDSGFSSQGVDTYVEMR 724

Query: 1031 PGVSYVVPTKADKRRSARIGSYIERDVTPAIMXXXXXXXXXXXXXSFSYQVAKGMAFLAS 1210
            P     V T      S+   S+ E+D+                   FS QVA+GMAFLAS
Sbjct: 725  P-----VST------SSSNDSFSEQDLD----KEDGRPLELRDLLHFSSQVAQGMAFLAS 769

Query: 1211 K-----------------------------------------NARLPVKWMAPESIFNCV 1267
            K                                         NARLPVKWMAPESIF+CV
Sbjct: 770  KNCIHRDVAARNVLLTSGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCV 829

Query: 1268 YTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPVEMYDIMKT 1447
            YT +SDVWSYGI LWE+FSLG +PYPG+ V+SKFYK++K+G++M  P  AP  +Y IM+ 
Sbjct: 830  YTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQMAQPAFAPENIYSIMQA 889

Query: 1448 CWDADPLKRPTFKQIVQLIEKQIS-ESTNHIYSNLANCSPHRENPAVDHSVRINSVGSSA 1624
            CW  +P +RPTF+QI  L+++Q+  +     YSNL +       P  + S    +     
Sbjct: 890  CWALEPTRRPTFQQICSLLQEQVQVDRREQDYSNLPSSGSSSSEPEEESSSEHLTCCEQG 949

Query: 1625 SSTQPLL 1645
               QPLL
Sbjct: 950  DIAQPLL 956


>ref|NP_001179274.1| alpha-type platelet-derived growth factor receptor [Bos taurus].
          Length = 1089

 Score =  366 bits (940), Expect = e-101
 Identities = 224/601 (37%), Positives = 313/601 (52%), Gaps = 73/601 (12%)
 Frame = +2

Query: 2    LTRLKGTEGGTYTFLVSNADVNSSVTLNVYVNTKPEILT-----HDRLMNGMLQCVAAGF 166
            L R K  + G YT +V N D   S T  +       IL      H       ++C A G 
Sbjct: 381  LIRAKEEDSGHYTIVVQNEDDVKSYTFELLTQVPSSILDLVDDHHGSNGGQTVRCTAEGT 440

Query: 167  PEPTIDWYFCPGTEQ---RCSVPVGPVDVQIQNSSVSPFGKLVIHSSIDYSAFKHNGTVE 337
            P P I+W  C   ++     S  V   +V    + V P  +  +   + ++  +    V 
Sbjct: 441  PLPDIEWMVCKDIKKCNNETSWTVLANNVSNIITGVHPRDRSTVEGQVTFAKVEETIAVR 500

Query: 338  CRAYNDVGKSSAFFNFAFKEQIHAHTLFTPLLIGFVIAAGMMCIIVMILTYKYLQKPMYE 517
            C A N +G  S              T+   +L+  VI   ++ +IV+++ +K  QKP YE
Sbjct: 501  CLAKNLLGVESRELKLVAPTLRSELTVAAAVLVLLVIV--IISLIVLVVIWK--QKPRYE 556

Query: 518  VQWKVVEEIN--GNNYVYIDPTQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLI 691
            ++W+V+E I+  G+ Y+Y+DP QLPYD +WEFPR+ L  G+ LG+GAFGKVVE TAYGL 
Sbjct: 557  IRWRVIESISPDGHEYIYVDPMQLPYDSRWEFPRDGLVLGRILGSGAFGKVVEGTAYGLS 616

Query: 692  KSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEY 871
            +S   M VAVKMLKP+A  +E++ALMSELK++++LG H+NIVNLLGACT  GP  +ITEY
Sbjct: 617  RSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGACTKSGPIYIITEY 676

Query: 872  CCYGDLLNFLRRKRDSFICSKQEDHAEAALYKNLLHSKESSCS------DSTNEYMDMKP 1033
            C YGDL+N+L + RDSF+    E   +      L  + ES+ S      ++  +YMDMK 
Sbjct: 677  CFYGDLVNYLHKNRDSFLSHHPEKPKKELDIFGLNPADESTRSYVILSFENNGDYMDMKQ 736

Query: 1034 G----------------VSYVVPTKADKRRSARIGSYIERDVTPAIMXXXXXXXXXXXXX 1165
                              S +     D+  S +  S ++ +V   +              
Sbjct: 737  ADTTQYVPMLERKEVSKYSDIQRALYDRPASYKKKSMLDSEVKNLLSDDNSEGLTLLDLL 796

Query: 1166 SFSYQVAKGMAFLASKN-------AR---------------------------------- 1222
            SF+YQVA+GM FLASKN       AR                                  
Sbjct: 797  SFTYQVARGMEFLASKNCVHRDLAARNVLLAQGKIVKICDFGLARDIMHDSNYVSKGSTF 856

Query: 1223 LPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRML 1402
            LPVKWMAPESIF+ +YT  SDVWSYGI LWE+FSLG +PYPGM VDS FY  IK G+RM 
Sbjct: 857  LPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMMVDSTFYNKIKSGYRMA 916

Query: 1403 SPEHAPVEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISESTNHIYSNLANCSPHRENPA 1582
             P+HA  E+Y+IM  CW+++P KRP+F  + +++E  +       Y  +       ++PA
Sbjct: 917  KPDHATSEVYEIMVKCWNSEPEKRPSFYHLSEIVENLLPGQYKKSYEKIHLDFLKSDHPA 976

Query: 1583 V 1585
            V
Sbjct: 977  V 977


>ref|XP_002688301.1| PREDICTED: platelet-derived growth factor receptor, alpha polypeptide
            [Bos taurus].
          Length = 1089

 Score =  366 bits (940), Expect = e-101
 Identities = 224/601 (37%), Positives = 313/601 (52%), Gaps = 73/601 (12%)
 Frame = +2

Query: 2    LTRLKGTEGGTYTFLVSNADVNSSVTLNVYVNTKPEILT-----HDRLMNGMLQCVAAGF 166
            L R K  + G YT +V N D   S T  +       IL      H       ++C A G 
Sbjct: 381  LIRAKEEDSGHYTIVVQNEDDVKSYTFELLTQVPSSILDLVDDHHGSNGGQTVRCTAEGT 440

Query: 167  PEPTIDWYFCPGTEQ---RCSVPVGPVDVQIQNSSVSPFGKLVIHSSIDYSAFKHNGTVE 337
            P P I+W  C   ++     S  V   +V    + V P  +  +   + ++  +    V 
Sbjct: 441  PLPDIEWMVCKDIKKCNNETSWTVLANNVSNIITGVHPRDRSTVEGQVTFAKVEETIAVR 500

Query: 338  CRAYNDVGKSSAFFNFAFKEQIHAHTLFTPLLIGFVIAAGMMCIIVMILTYKYLQKPMYE 517
            C A N +G  S              T+   +L+  VI   ++ +IV+++ +K  QKP YE
Sbjct: 501  CLAKNLLGVESRELKLVAPTLRSELTVAAAVLVLLVIV--IISLIVLVVIWK--QKPRYE 556

Query: 518  VQWKVVEEIN--GNNYVYIDPTQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLI 691
            ++W+V+E I+  G+ Y+Y+DP QLPYD +WEFPR+ L  G+ LG+GAFGKVVE TAYGL 
Sbjct: 557  IRWRVIESISPDGHEYIYVDPMQLPYDSRWEFPRDGLVLGRILGSGAFGKVVEGTAYGLS 616

Query: 692  KSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEY 871
            +S   M VAVKMLKP+A  +E++ALMSELK++++LG H+NIVNLLGACT  GP  +ITEY
Sbjct: 617  RSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGACTKSGPIYIITEY 676

Query: 872  CCYGDLLNFLRRKRDSFICSKQEDHAEAALYKNLLHSKESSCS------DSTNEYMDMKP 1033
            C YGDL+N+L + RDSF+    E   +      L  + ES+ S      ++  +YMDMK 
Sbjct: 677  CFYGDLVNYLHKNRDSFLSHHPEKPKKELDIFGLNPADESTRSYVILSFENNGDYMDMKQ 736

Query: 1034 G----------------VSYVVPTKADKRRSARIGSYIERDVTPAIMXXXXXXXXXXXXX 1165
                              S +     D+  S +  S ++ +V   +              
Sbjct: 737  ADTTQYVPMLERKEVSKYSDIQRALYDRPASYKKKSMLDSEVKNLLSDDNSEGLTLLDLL 796

Query: 1166 SFSYQVAKGMAFLASKN-------AR---------------------------------- 1222
            SF+YQVA+GM FLASKN       AR                                  
Sbjct: 797  SFTYQVARGMEFLASKNCVHRDLAARNVLLAQGKIVKICDFGLARDIMHDSNYVSKGSTF 856

Query: 1223 LPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRML 1402
            LPVKWMAPESIF+ +YT  SDVWSYGI LWE+FSLG +PYPGM VDS FY  IK G+RM 
Sbjct: 857  LPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMMVDSTFYNKIKSGYRMA 916

Query: 1403 SPEHAPVEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISESTNHIYSNLANCSPHRENPA 1582
             P+HA  E+Y+IM  CW+++P KRP+F  + +++E  +       Y  +       ++PA
Sbjct: 917  KPDHATSEVYEIMVKCWNSEPEKRPSFYHLSEIVENLLPGQYKKSYEKIHLDFLKSDHPA 976

Query: 1583 V 1585
            V
Sbjct: 977  V 977


>ref|NP_001069364.2| beta-type platelet-derived growth factor receptor [Bos taurus].
          Length = 1103

 Score =  340 bits (872), Expect = 3e-93
 Identities = 220/611 (36%), Positives = 317/611 (51%), Gaps = 83/611 (13%)
 Frame = +2

Query: 2    LTRLKGTEGGTYTFLVSNADVNSSVTLNVYVNTKPEIL----THDRLMNGMLQCVAAGFP 169
            L R+K  E G YT    + D  + ++  + VN    +L    +H       ++C   G P
Sbjct: 382  LVRVKVAEAGYYTMRAFHEDAEAQLSFQLQVNVPVRVLELSESHPANGEQTVRCRGRGMP 441

Query: 170  EPTIDWYFCPGTEQRCSVPVGPVDVQIQNSSVSPFGKLVIH----------SSIDYSAFK 319
            +P + W  C   + RC   + P  +   +   S     V +          S++      
Sbjct: 442  QPHLTWSTCSDLK-RCPRELPPTPLGNSSEEESQLETNVTYWAEEQEFEVVSTLRLRHVD 500

Query: 320  HNGTVECRAYNDVGKSSAFFNFAFKEQIHAHTL-FTPLLIGFVIAAGMMCII-VMILTYK 493
               +V C  +N +G          +  +  H+L F  ++I  ++A  ++ II ++IL   
Sbjct: 501  QPLSVRCTLHNLLGYDVQ------EVTVVPHSLPFKVVVISAILALVVLTIISLIILIML 554

Query: 494  YLQKPMYEVQWKVVEEIN--GNNYVYIDPTQLPYDHKWEFPRNRLSFGKTLGAGAFGKVV 667
            + +KP YE++WKV+E ++  G+ Y+Y+DP QLPYD  WE PR++L  G+TLG+GAFG+VV
Sbjct: 555  WQKKPRYEIRWKVIESVSSDGHEYIYVDPMQLPYDSTWELPRDQLVLGRTLGSGAFGQVV 614

Query: 668  EATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGG 847
            EATA+GL  S A M VAVKMLK +A  +E++ALMSELK++S+LG H+N+VNLLGACT GG
Sbjct: 615  EATAHGLSHSQATMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNVVNLLGACTKGG 674

Query: 848  PTLVITEYCCYGDLLNFLRRKRDSFI--CSKQEDHAEAALYKNL------LHSKESSCSD 1003
            P  +ITEYC YGDL+++L R + +F+  CS +     A LY N       L S  S   +
Sbjct: 675  PIYIITEYCRYGDLVDYLHRNKHTFLQRCSDKRRPPSAELYSNALPVGLPLPSHVSLPGE 734

Query: 1004 STNEYMDMK--PGVSYV--VPTKADKRRS--------ARIGSYI----ERDVTPAIMXXX 1135
            S   YMDM     V YV  +  K D + +        A   +Y+    ER     ++   
Sbjct: 735  SDGGYMDMSKDESVDYVPMLDMKGDVKYADIESSNYMAPYDNYVPSAPERTCRVTLI-NE 793

Query: 1136 XXXXXXXXXXSFSYQVAKGMAFLASKN-------AR------------------------ 1222
                       FSYQVA GM FLASKN       AR                        
Sbjct: 794  SPVLSYTDLVGFSYQVANGMEFLASKNCVHRDLAARNVLICEGKLVKICDFGLARDIMRD 853

Query: 1223 ----------LPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFY 1372
                      LP+KWMAPESIFN +YT  SDVWS+GI LWE+F+LG +PYP +P++ +FY
Sbjct: 854  SNYISKGSTFLPLKWMAPESIFNSLYTTLSDVWSFGILLWEIFTLGGTPYPELPMNEQFY 913

Query: 1373 KMIKEGFRMLSPEHAPVEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISESTNHIYSNLA 1552
              IK G+RM  P HA  E+Y+IM+ CW+     RP F Q+V L+E+ + E     Y  + 
Sbjct: 914  NAIKRGYRMAQPAHASDEIYEIMQKCWEEKFEIRPPFSQLVLLLERLLGEGYKKKYQQVD 973

Query: 1553 NCSPHRENPAV 1585
                  ++PA+
Sbjct: 974  EEFLRSDHPAI 984


>ref|XP_002689337.1| PREDICTED: platelet-derived growth factor receptor, beta polypeptide
            [Bos taurus].
          Length = 1103

 Score =  340 bits (872), Expect = 3e-93
 Identities = 220/611 (36%), Positives = 317/611 (51%), Gaps = 83/611 (13%)
 Frame = +2

Query: 2    LTRLKGTEGGTYTFLVSNADVNSSVTLNVYVNTKPEIL----THDRLMNGMLQCVAAGFP 169
            L R+K  E G YT    + D  + ++  + VN    +L    +H       ++C   G P
Sbjct: 382  LVRVKVAEAGYYTMRAFHEDAEAQLSFQLQVNVPVRVLELSESHPANGEQTVRCRGRGMP 441

Query: 170  EPTIDWYFCPGTEQRCSVPVGPVDVQIQNSSVSPFGKLVIH----------SSIDYSAFK 319
            +P + W  C   + RC   + P  +   +   S     V +          S++      
Sbjct: 442  QPHLTWSTCSDLK-RCPRELPPTPLGNSSEEESQLETNVTYWAEEQEFEVVSTLRLRHVD 500

Query: 320  HNGTVECRAYNDVGKSSAFFNFAFKEQIHAHTL-FTPLLIGFVIAAGMMCII-VMILTYK 493
               +V C  +N +G          +  +  H+L F  ++I  ++A  ++ II ++IL   
Sbjct: 501  QPLSVRCTLHNLLGYDVQ------EVTVVPHSLPFKVVVISAILALVVLTIISLIILIML 554

Query: 494  YLQKPMYEVQWKVVEEIN--GNNYVYIDPTQLPYDHKWEFPRNRLSFGKTLGAGAFGKVV 667
            + +KP YE++WKV+E ++  G+ Y+Y+DP QLPYD  WE PR++L  G+TLG+GAFG+VV
Sbjct: 555  WQKKPRYEIRWKVIESVSSDGHEYIYVDPMQLPYDSTWELPRDQLVLGRTLGSGAFGQVV 614

Query: 668  EATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGG 847
            EATA+GL  S A M VAVKMLK +A  +E++ALMSELK++S+LG H+N+VNLLGACT GG
Sbjct: 615  EATAHGLSHSQATMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNVVNLLGACTKGG 674

Query: 848  PTLVITEYCCYGDLLNFLRRKRDSFI--CSKQEDHAEAALYKNL------LHSKESSCSD 1003
            P  +ITEYC YGDL+++L R + +F+  CS +     A LY N       L S  S   +
Sbjct: 675  PIYIITEYCRYGDLVDYLHRNKHTFLQRCSDKRRPPSAELYSNALPVGLPLPSHVSLPGE 734

Query: 1004 STNEYMDMK--PGVSYV--VPTKADKRRS--------ARIGSYI----ERDVTPAIMXXX 1135
            S   YMDM     V YV  +  K D + +        A   +Y+    ER     ++   
Sbjct: 735  SDGGYMDMSKDESVDYVPMLDMKGDVKYADIESSNYMAPYDNYVPSAPERTCRVTLI-NE 793

Query: 1136 XXXXXXXXXXSFSYQVAKGMAFLASKN-------AR------------------------ 1222
                       FSYQVA GM FLASKN       AR                        
Sbjct: 794  SPVLSYTDLVGFSYQVANGMEFLASKNCVHRDLAARNVLICEGKLVKICDFGLARDIMRD 853

Query: 1223 ----------LPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFY 1372
                      LP+KWMAPESIFN +YT  SDVWS+GI LWE+F+LG +PYP +P++ +FY
Sbjct: 854  SNYISKGSTFLPLKWMAPESIFNSLYTTLSDVWSFGILLWEIFTLGGTPYPELPMNEQFY 913

Query: 1373 KMIKEGFRMLSPEHAPVEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISESTNHIYSNLA 1552
              IK G+RM  P HA  E+Y+IM+ CW+     RP F Q+V L+E+ + E     Y  + 
Sbjct: 914  NAIKRGYRMAQPAHASDEIYEIMQKCWEEKFEIRPPFSQLVLLLERLLGEGYKKKYQQVD 973

Query: 1553 NCSPHRENPAV 1585
                  ++PA+
Sbjct: 974  EEFLRSDHPAI 984


>ref|XP_001790034.1| PREDICTED: platelet-derived growth factor receptor beta [Bos taurus].
          Length = 1103

 Score =  340 bits (872), Expect = 3e-93
 Identities = 220/611 (36%), Positives = 317/611 (51%), Gaps = 83/611 (13%)
 Frame = +2

Query: 2    LTRLKGTEGGTYTFLVSNADVNSSVTLNVYVNTKPEIL----THDRLMNGMLQCVAAGFP 169
            L R+K  E G YT    + D  + ++  + VN    +L    +H       ++C   G P
Sbjct: 382  LVRVKVAEAGYYTMRAFHEDAEAQLSFQLQVNVPVRVLELSESHPANGEQTVRCRGRGMP 441

Query: 170  EPTIDWYFCPGTEQRCSVPVGPVDVQIQNSSVSPFGKLVIH----------SSIDYSAFK 319
            +P + W  C   + RC   + P  +   +   S     V +          S++      
Sbjct: 442  QPHLTWSTCSDLK-RCPRELPPTPLGNSSEEESQLETNVTYWAEEQEFEVVSTLRLRHVD 500

Query: 320  HNGTVECRAYNDVGKSSAFFNFAFKEQIHAHTL-FTPLLIGFVIAAGMMCII-VMILTYK 493
               +V C  +N +G          +  +  H+L F  ++I  ++A  ++ II ++IL   
Sbjct: 501  QPLSVRCTLHNLLGYDVQ------EVTVVPHSLPFKVVVISAILALVVLTIISLIILIML 554

Query: 494  YLQKPMYEVQWKVVEEIN--GNNYVYIDPTQLPYDHKWEFPRNRLSFGKTLGAGAFGKVV 667
            + +KP YE++WKV+E ++  G+ Y+Y+DP QLPYD  WE PR++L  G+TLG+GAFG+VV
Sbjct: 555  WQKKPRYEIRWKVIESVSSDGHEYIYVDPMQLPYDSTWELPRDQLVLGRTLGSGAFGQVV 614

Query: 668  EATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGG 847
            EATA+GL  S A M VAVKMLK +A  +E++ALMSELK++S+LG H+N+VNLLGACT GG
Sbjct: 615  EATAHGLSHSQATMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNVVNLLGACTKGG 674

Query: 848  PTLVITEYCCYGDLLNFLRRKRDSFI--CSKQEDHAEAALYKNL------LHSKESSCSD 1003
            P  +ITEYC YGDL+++L R + +F+  CS +     A LY N       L S  S   +
Sbjct: 675  PIYIITEYCRYGDLVDYLHRNKHTFLQRCSDKRRPPSAELYSNALPVGLPLPSHVSLPGE 734

Query: 1004 STNEYMDMK--PGVSYV--VPTKADKRRS--------ARIGSYI----ERDVTPAIMXXX 1135
            S   YMDM     V YV  +  K D + +        A   +Y+    ER     ++   
Sbjct: 735  SDGGYMDMSKDESVDYVPMLDMKGDVKYADIESSNYMAPYDNYVPSAPERTCRVTLI-NE 793

Query: 1136 XXXXXXXXXXSFSYQVAKGMAFLASKN-------AR------------------------ 1222
                       FSYQVA GM FLASKN       AR                        
Sbjct: 794  SPVLSYTDLVGFSYQVANGMEFLASKNCVHRDLAARNVLICEGKLVKICDFGLARDIMRD 853

Query: 1223 ----------LPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFY 1372
                      LP+KWMAPESIFN +YT  SDVWS+GI LWE+F+LG +PYP +P++ +FY
Sbjct: 854  SNYISKGSTFLPLKWMAPESIFNSLYTTLSDVWSFGILLWEIFTLGGTPYPELPMNEQFY 913

Query: 1373 KMIKEGFRMLSPEHAPVEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISESTNHIYSNLA 1552
              IK G+RM  P HA  E+Y+IM+ CW+     RP F Q+V L+E+ + E     Y  + 
Sbjct: 914  NAIKRGYRMAQPAHASDEIYEIMQKCWEEKFEIRPPFSQLVLLLERLLGEGYKKKYQQVD 973

Query: 1553 NCSPHRENPAV 1585
                  ++PA+
Sbjct: 974  EEFLRSDHPAI 984


>ref|XP_002691902.1| PREDICTED: fms-related tyrosine kinase 3-like, partial [Bos taurus].
          Length = 978

 Score =  323 bits (827), Expect = 6e-88
 Identities = 197/559 (35%), Positives = 282/559 (50%), Gaps = 52/559 (9%)
 Frame = +2

Query: 29   GTYTFLVSNADVNSSVTLNVYVNTKPEILTHDRLMNGMLQCVAAGFPEPTIDWYFCPGTE 208
            G Y F   N D   +    + +  KP++L           C + G+P P+  W  C    
Sbjct: 399  GQYIFHAENDDAQFTKEFTLNIRRKPQVLAEASASQA--SCSSDGYPIPSWTWKKCSDKS 456

Query: 209  QRCSVPVGPVDVQIQNSSVSPFGKLVIHSSIDYSAFKHNGTVECRAYNDVGKSSAFFNFA 388
              C+  +    +  + ++   FG+ +  S+++ S       V+C AYN +G S      +
Sbjct: 457  PNCTEEITE-GIWNKKANRKVFGQWISSSTLNMSEAVKGFLVKCCAYNALGTSCETILLS 515

Query: 389  FKEQIHAHTLFTPLLIGFVIAAGMMCIIVMILTYKYLQKPMYEVQWKVVEEING--NNYV 562
                  +            +    + ++ M++ +KY ++  YE Q ++V+      N Y+
Sbjct: 516  SPGPFPSIQDNISFYATIGLCLPFIAVLTMLICHKYKKQFRYESQLQMVQVTGSLDNEYL 575

Query: 563  YIDPTQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSA 742
            YID  +  YD KWEFPR  L FGK LG+GAFGKV+ ATAYG+ K+  ++ VAVKMLK  A
Sbjct: 576  YIDFREYEYDLKWEFPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKA 635

Query: 743  HLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSF 922
              +EREALMSELK++++LG+H NIVNLLGACT+ GP  +I EYCCYGDLLN+LR KR+ F
Sbjct: 636  DSSEREALMSELKMMTHLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKF 695

Query: 923  ICSKQEDHAE--AALYKNLLHSKESSC--SDSTNEYMDMKP-----GVSYVVPTKADKRR 1075
              +  E   E   + Y        SS   S     + D  P     G S+    + +   
Sbjct: 696  HRTWTEIFKEHNFSFYPTFQSHPNSSMPGSREVQIHPDSDPISGFNGNSFQSEDEIEYEN 755

Query: 1076 SARIGSYIERDVTPAIMXXXXXXXXXXXXXSFSYQVAKGMAFLASK-------------- 1213
              R+    E D+                   F+YQVAKGM FL  K              
Sbjct: 756  QKRLEE--EEDLN---------VLTFEDLLCFAYQVAKGMEFLEFKSCLHRDLAARNVLV 804

Query: 1214 ---------------------------NARLPVKWMAPESIFNCVYTFESDVWSYGIFLW 1312
                                       NARLPVKWMAPES+F  +YT +SDVWSYGI LW
Sbjct: 805  THGKVAKIADFGLARDIMSDSNYVIRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLW 864

Query: 1313 ELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPVEMYDIMKTCWDADPLKRPTFKQI 1492
            E+FSLG +PYPG+P D+ FYK+I+ GF+M  P +A  E+Y IM++CW  D  KRP+F  +
Sbjct: 865  EIFSLGVNPYPGIPADANFYKLIQSGFKMDQPFYATEEIYFIMQSCWAFDSRKRPSFPNL 924

Query: 1493 VQLIEKQISESTNHIYSNL 1549
               +  Q++++   +Y N+
Sbjct: 925  TSFLGCQLADAEEAMYQNM 943


>ref|XP_590263.4| PREDICTED: fms-related tyrosine kinase 3-like [Bos taurus].
          Length = 1077

 Score =  323 bits (827), Expect = 6e-88
 Identities = 197/559 (35%), Positives = 282/559 (50%), Gaps = 52/559 (9%)
 Frame = +2

Query: 29   GTYTFLVSNADVNSSVTLNVYVNTKPEILTHDRLMNGMLQCVAAGFPEPTIDWYFCPGTE 208
            G Y F   N D   +    + +  KP++L           C + G+P P+  W  C    
Sbjct: 498  GQYIFHAENDDAQFTKEFTLNIRRKPQVLAEASASQA--SCSSDGYPIPSWTWKKCSDKS 555

Query: 209  QRCSVPVGPVDVQIQNSSVSPFGKLVIHSSIDYSAFKHNGTVECRAYNDVGKSSAFFNFA 388
              C+  +    +  + ++   FG+ +  S+++ S       V+C AYN +G S      +
Sbjct: 556  PNCTEEITE-GIWNKKANRKVFGQWISSSTLNMSEAVKGFLVKCCAYNALGTSCETILLS 614

Query: 389  FKEQIHAHTLFTPLLIGFVIAAGMMCIIVMILTYKYLQKPMYEVQWKVVEEING--NNYV 562
                  +            +    + ++ M++ +KY ++  YE Q ++V+      N Y+
Sbjct: 615  SPGPFPSIQDNISFYATIGLCLPFIAVLTMLICHKYKKQFRYESQLQMVQVTGSLDNEYL 674

Query: 563  YIDPTQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSA 742
            YID  +  YD KWEFPR  L FGK LG+GAFGKV+ ATAYG+ K+  ++ VAVKMLK  A
Sbjct: 675  YIDFREYEYDLKWEFPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKA 734

Query: 743  HLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSF 922
              +EREALMSELK++++LG+H NIVNLLGACT+ GP  +I EYCCYGDLLN+LR KR+ F
Sbjct: 735  DSSEREALMSELKMMTHLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKF 794

Query: 923  ICSKQEDHAE--AALYKNLLHSKESSC--SDSTNEYMDMKP-----GVSYVVPTKADKRR 1075
              +  E   E   + Y        SS   S     + D  P     G S+    + +   
Sbjct: 795  HRTWTEIFKEHNFSFYPTFQSHPNSSMPGSREVQIHPDSDPISGFNGNSFQSEDEIEYEN 854

Query: 1076 SARIGSYIERDVTPAIMXXXXXXXXXXXXXSFSYQVAKGMAFLASK-------------- 1213
              R+    E D+                   F+YQVAKGM FL  K              
Sbjct: 855  QKRLEE--EEDLN---------VLTFEDLLCFAYQVAKGMEFLEFKSCLHRDLAARNVLV 903

Query: 1214 ---------------------------NARLPVKWMAPESIFNCVYTFESDVWSYGIFLW 1312
                                       NARLPVKWMAPES+F  +YT +SDVWSYGI LW
Sbjct: 904  THGKVAKIADFGLARDIMSDSNYVIRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLW 963

Query: 1313 ELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPVEMYDIMKTCWDADPLKRPTFKQI 1492
            E+FSLG +PYPG+P D+ FYK+I+ GF+M  P +A  E+Y IM++CW  D  KRP+F  +
Sbjct: 964  EIFSLGVNPYPGIPADANFYKLIQSGFKMDQPFYATEEIYFIMQSCWAFDSRKRPSFPNL 1023

Query: 1493 VQLIEKQISESTNHIYSNL 1549
               +  Q++++   +Y N+
Sbjct: 1024 TSFLGCQLADAEEAMYQNM 1042


>ref|NP_001178061.2| vascular endothelial growth factor receptor 1 [Bos taurus].
          Length = 1337

 Score =  259 bits (661), Expect = 1e-68
 Identities = 191/575 (33%), Positives = 282/575 (49%), Gaps = 82/575 (14%)
 Frame = +2

Query: 32   TYTFLVSNADVNSSVTL-----NVYVNT----KPEILTHDR----LMNGM---------- 142
            T+  ++ NA +  S T      N+Y       K E++  D+    L+  +          
Sbjct: 619  TFNLVIKNASLEDSGTYACRARNIYTGEEILQKKEVIIRDQEAPYLLRNLSDLTVAISSS 678

Query: 143  --LQCVAAGFPEPTIDWYFCPGT-EQRCSVPVGPVDVQIQNSSVSPFGKLVIHSSIDYSA 313
              L C A G PEP I W+      +Q   + +GP       SS      L I    +  A
Sbjct: 679  TTLDCHANGVPEPQITWFKNNHKIQQEPGIILGP------GSST-----LFIERVTEEDA 727

Query: 314  FKHNGTVECRAYNDVGKSSAFFNFAFKEQIHAHTLFTPLLIGFVIAAGMMCIIVMILTYK 493
                G   C+A N  G + +  +   +       L    L    +AA +  +++ +   K
Sbjct: 728  ----GVYHCKASNLKGSAESSAHLTVQGTSDKSNLELITLTCTCVAATLFWLLLTLFIRK 783

Query: 494  YLQKPMYEVQWKVVEEINGNNYVYIDPT--QLPYD-HKWEFPRNRLSFGKTLGAGAFGKV 664
             L++   E++   +  I   + V +D    +LPYD  KWEF R RL  GK+LG GAFGKV
Sbjct: 784  -LKRSSSEIKADYLSIIMDPDEVPLDEQCDRLPYDASKWEFARERLKLGKSLGRGAFGKV 842

Query: 665  VEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACT-I 841
            V+A+A+G+ KS    TVAVKMLK  A  +E +ALM+ELK+L+++G+H+N+VNLLGACT  
Sbjct: 843  VQASAFGIKKSPTCRTVAVKMLKEGATASEYKALMTELKILTHIGHHLNVVNLLGACTKQ 902

Query: 842  GGPTLVITEYCCYGDLLNFLRRKRDSFICSK--------QEDHAEAAL---YKNLLHSKE 988
            GGP +VI EYC YG+L N+L+ KR  F  +K        +++  E  L    K  L S  
Sbjct: 903  GGPLMVIVEYCKYGNLSNYLKSKRALFFLNKDAALHVEPKKEKMEPDLEQGEKQRLDSVT 962

Query: 989  SSCSDSTNEYMDMKPGVSYVVPTKADKRRSARIGSYIERDVTPAIMXXXXXXXXXXXXXS 1168
            SS S +++ + + K        + +D         + ++ +T                 S
Sbjct: 963  SSESFASSGFQEDK--------SLSDVEEEEDFDDFYKQPIT------------MEDLIS 1002

Query: 1169 FSYQVAKGMAFLASK-----------------------------------------NARL 1225
            +S+QVA+GM FL+S+                                         + RL
Sbjct: 1003 YSFQVARGMEFLSSRKCIHRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRKGDTRL 1062

Query: 1226 PVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLS 1405
            P+KWMAPESIF+ +Y+ +SDVWSYG+ LWE+FSLG SPYPG+ +D  F   +K+G RM +
Sbjct: 1063 PLKWMAPESIFDKIYSTKSDVWSYGVLLWEIFSLGGSPYPGVQMDEDFCSRLKDGMRMRA 1122

Query: 1406 PEHAPVEMYDIMKTCWDADPLKRPTFKQIVQLIEK 1510
            PE+A  E+Y  M  CW  DP +RP F   V+L+EK
Sbjct: 1123 PEYATPEIYQTMLDCWHKDPKERPRF---VELVEK 1154


  Database: RefSeq49_BP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 17,681,374
  Number of sequences in database:  33,088
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33088
Number of Hits to DB: 91,580,601
Number of extensions: 2483024
Number of successful extensions: 9415
Number of sequences better than 1.0e-05: 154
Number of HSP's gapped: 9059
Number of HSP's successfully gapped: 237
Length of query: 788
Length of database: 17,681,374
Length adjustment: 110
Effective length of query: 678
Effective length of database: 14,041,694
Effective search space: 9520268532
Effective search space used: 9520268532
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)

Search to RefSeqCP_Rel49

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-012635
         (2366 letters)

Database: RefSeq49_CP.fasta 
           33,336 sequences; 18,874,504 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_001003181.1| mast/stem cell growth factor receptor [Canis...  1025   0.0  
Alignment   gi|XP_546306.2| PREDICTED: similar to colony stimulating factor...   460   e-129
Alignment   gi|XP_532374.2| PREDICTED: similar to Alpha platelet-derived gr...   367   e-101
Alignment   gi|NP_001003382.1| beta-type platelet-derived growth factor rec...   344   2e-94
Alignment   gi|NP_001018647.1| FL cytokine receptor [Canis lupus familiaris].    325   9e-89
Alignment   gi|XP_534520.2| PREDICTED: similar to Vascular endothelial grow...   268   2e-71
Alignment   gi|NP_001003336.1| fibroblast growth factor receptor 2 [Canis l...   227   3e-59
Alignment   gi|XP_545926.2| PREDICTED: similar to Fibroblast growth factor ...   224   3e-58
Alignment   gi|XP_848780.1| PREDICTED: similar to fibroblast growth factor ...   218   3e-56
Alignment   gi|XP_857002.1| PREDICTED: similar to fibroblast growth factor ...   218   3e-56

>ref|NP_001003181.1| mast/stem cell growth factor receptor [Canis lupus familiaris].
          Length = 975

 Score = 1025 bits (2649), Expect = 0.0
 Identities = 508/593 (85%), Positives = 521/593 (87%), Gaps = 41/593 (6%)
 Frame = +2

Query: 2    LTRLKGTEGGTYTFLVSNADVNSSVTLNVYVNTKPEILTHDRLMNGMLQCVAAGFPEPTI 181
            LTRLKG EGGTYTF VSN+DVNSSVT NVYVNTKPEILTH+ L NGMLQCV AGFPEP +
Sbjct: 382  LTRLKGNEGGTYTFQVSNSDVNSSVTFNVYVNTKPEILTHESLTNGMLQCVVAGFPEPAV 441

Query: 182  DWYFCPGTEQRCSVPVGPVDVQIQNSSVSPFGKLVIHSSIDYSAFKHNGTVECRAYNDVG 361
             WYFCPG EQRCSVP+GP+DVQ+QNSS+SP GKLV+ SSIDYSAFKHNGTVECRAYN+VG
Sbjct: 442  GWYFCPGAEQRCSVPIGPMDVQMQNSSLSPSGKLVVQSSIDYSAFKHNGTVECRAYNNVG 501

Query: 362  KSSAFFNFAFKEQIHAHTLFTPLLIGFVIAAGMMCIIVMILTYKYLQKPMYEVQWKVVEE 541
            +SSAFFNFAFKEQIH HTLFTPLLIGFVIAAGMMCIIVMILTYKYLQKPMYEVQWKVVEE
Sbjct: 502  RSSAFFNFAFKEQIHPHTLFTPLLIGFVIAAGMMCIIVMILTYKYLQKPMYEVQWKVVEE 561

Query: 542  INGNNYVYIDPTQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAV 721
            INGNNYVYIDPTQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAV
Sbjct: 562  INGNNYVYIDPTQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAV 621

Query: 722  KMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFL 901
            KMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACT+GGPTLVITEYCCYGDLLNFL
Sbjct: 622  KMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTVGGPTLVITEYCCYGDLLNFL 681

Query: 902  RRKRDSFICSKQEDHAEAALYKNLLHSKESSCSDSTNEYMDMKPGVSYVVPTKADKRRSA 1081
            RRKRDSFICSKQEDH E ALYKNLLHSKESSCSDSTNEYMDMKPGVSYVVPTKADKRRSA
Sbjct: 682  RRKRDSFICSKQEDHGEVALYKNLLHSKESSCSDSTNEYMDMKPGVSYVVPTKADKRRSA 741

Query: 1082 RIGSYIERDVTPAIMXXXXXXXXXXXXXSFSYQVAKGMAFLASK---------------- 1213
            RIGSYIERDVTPAIM             SFSYQVAKGMAFLASK                
Sbjct: 742  RIGSYIERDVTPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTH 801

Query: 1214 -------------------------NARLPVKWMAPESIFNCVYTFESDVWSYGIFLWEL 1318
                                     NARLPVKWMAPESIFNCVYTFESDVWSYGIFLWEL
Sbjct: 802  GRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWEL 861

Query: 1319 FSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPVEMYDIMKTCWDADPLKRPTFKQIVQ 1498
            FSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAP EMYDIMKTCWDADPLKRPTFKQIVQ
Sbjct: 862  FSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQ 921

Query: 1499 LIEKQISESTNHIYSNLANCSPHRENPAVDHSVRINSVGSSASSTQPLLVHED 1657
            LIEKQIS+STNHIYSNLANCSP+ E P VDHSVRINSVGSSASSTQPLLVHED
Sbjct: 922  LIEKQISDSTNHIYSNLANCSPNPERPVVDHSVRINSVGSSASSTQPLLVHED 974


>ref|XP_546306.2| PREDICTED: similar to colony stimulating factor 1 receptor precursor
            [Canis familiaris].
          Length = 967

 Score =  460 bits (1183), Expect = e-129
 Identities = 262/581 (45%), Positives = 342/581 (58%), Gaps = 61/581 (10%)
 Frame = +2

Query: 2    LTRLKGTEGGTYTFLVSNADVNSSVTLNVYVNTKPEILTHDRLMNGM--LQCVAAGFPEP 175
            L RLK +E G Y+FL  N     S+T  + +   PE+      +NG   L C A+G+P+P
Sbjct: 366  LPRLKPSEAGRYSFLARNTRGGDSLTFELTLLYPPEVRITWTTVNGSDALLCEASGYPQP 425

Query: 176  TIDWYFCPGTEQRCSVPVGPV--DVQIQNSSVSPFGKLVIHSSIDYSAFKHNGTVECRAY 349
             + W  C G   RC      V  D   +  S  PF K+++HS +     +HN T ECRA 
Sbjct: 426  NVTWLQCRGHTDRCDEAQALVLEDSYSEVLSQEPFHKVIVHSLLAMGTMEHNMTYECRAL 485

Query: 350  NDVGKSSAFFNFAFKEQIHAHT------LFTPLLIGFVIAAGMMCIIVMILTYKYLQKPM 511
            N VG SS  F       I AH       LFTP+L+  +    ++ +++++L YKY QKP 
Sbjct: 486  NSVGNSSQAFR---PIPIGAHIQPPDEPLFTPVLVTCMSIMVLLLLLLLLLFYKYKQKPK 542

Query: 512  YEVQWKVVEEINGNNYVYIDPTQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLI 691
            Y+V+WK++E   GN+Y +IDPTQLPY+ KWEFPRN L FGKTLGAGAFGKVVEATA+GL 
Sbjct: 543  YQVRWKIIESYEGNSYTFIDPTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLG 602

Query: 692  KSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEY 871
            K DA + VAVKMLK +AH  E+EALMSELK++S+LG H NIVNLLGACT GGP LVITEY
Sbjct: 603  KEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEY 662

Query: 872  CCYGDLLNFLRRKRDSFI---CSKQEDHAEAALYKNLLHSKESSCSDS------TNEYMD 1024
            CCYGDLLNFLRRK ++ +    S  +D    A YKN+   K+    DS       + Y++
Sbjct: 663  CCYGDLLNFLRRKAEAMLGPSVSVGQDPGAGAGYKNIHLEKKYVRRDSGFSSQGVDTYVE 722

Query: 1025 MKPGVSYVVPTKADKRRSARIGSYIERDVTPAIMXXXXXXXXXXXXXSFSYQVAKGMAFL 1204
            M+P     V T      S+   S+ E+D+                   FS QVA+GMAFL
Sbjct: 723  MRP-----VST------SSSNDSFSEQDLD----KEDGRPLELRDLLHFSSQVAQGMAFL 767

Query: 1205 ASK-----------------------------------------NARLPVKWMAPESIFN 1261
            ASK                                         NARLPVKWMAPESIF+
Sbjct: 768  ASKNCIHRDVAARNVLLTSGRVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFD 827

Query: 1262 CVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPVEMYDIM 1441
            CVYT +SDVWSYGI LWE+FSLG +PYPG+ V+SKFYK++K+G++M  P  AP  +Y +M
Sbjct: 828  CVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQMAQPAFAPKNIYSVM 887

Query: 1442 KTCWDADPLKRPTFKQIVQLIEKQI-SESTNHIYSNLANCS 1561
            + CW  +P +RPTF+QI  L+++Q  ++     Y+NL + S
Sbjct: 888  QACWALEPTRRPTFQQICSLLQEQAQADRREPDYTNLPSSS 928


>ref|XP_532374.2| PREDICTED: similar to Alpha platelet-derived growth factor receptor
            precursor (PDGF-R-alpha) (CD140a antigen) [Canis
            familiaris].
          Length = 1089

 Score =  367 bits (941), Expect = e-101
 Identities = 226/601 (37%), Positives = 317/601 (52%), Gaps = 73/601 (12%)
 Frame = +2

Query: 2    LTRLKGTEGGTYTFLVSNADVNSSVTLNVYVNTKPEILT-----HDRLMNGMLQCVAAGF 166
            L R K  + G YT +V N D   S T  +       IL      H       ++C+A G 
Sbjct: 381  LIRAKEEDSGHYTIVVQNEDDVKSYTFELLTQVPSSILDLVDDHHGSTGGQTVRCIAEGT 440

Query: 167  PEPTIDWYFCPGTEQ---RCSVPVGPVDVQIQNSSVSPFGKLVIHSSIDYSAFKHNGTVE 337
            P P I+W  C   ++     S  +   ++    + V P  +  +   + ++  +    V 
Sbjct: 441  PLPDIEWMICKDIKKCNNETSWAILANNISNIITEVHPRDRSTVEGRVTFTRVEETIAVR 500

Query: 338  CRAYNDVGKSSAFFNFAFKEQIHAHTLFTPLLIGFVIAAGMMCIIVMILTYKYLQKPMYE 517
            C A N +G  S              T+   +L+  VI   ++ +IV+++ +K  QKP YE
Sbjct: 501  CLAKNLLGAESRELKLVAPTLRSELTVAAAVLVLLVIV--IISLIVLVVIWK--QKPRYE 556

Query: 518  VQWKVVEEIN--GNNYVYIDPTQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLI 691
            ++W+V+E I+  G+ Y+Y+DP QLPYD +WEFPR+ L  G+ LG+GAFGKVVE TAYGL 
Sbjct: 557  IRWRVIESISPDGHEYIYVDPMQLPYDSRWEFPRDGLVLGRILGSGAFGKVVEGTAYGLS 616

Query: 692  KSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEY 871
            +S   M VAVKMLKP+A  +E++ALMSELK++++LG H+NIVNLLGACT  GP  +ITEY
Sbjct: 617  RSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGACTKSGPIYIITEY 676

Query: 872  CCYGDLLNFLRRKRDSFICSKQEDHAEAALYKNLLHSKESSCS------DSTNEYMDMKP 1033
            C YGDL+N+L + RDSF+    E   +      L  + +S+ S      ++  +YMDMK 
Sbjct: 677  CFYGDLVNYLHKNRDSFLSRHPEKPKKELDIFGLNPADDSTRSYVILSFENNGDYMDMKQ 736

Query: 1034 G--VSYV-------VPTKADKRRSA--RIGSY-----IERDVTPAIMXXXXXXXXXXXXX 1165
                 YV       V   +D +RS   R  SY     ++ +V   +              
Sbjct: 737  ADTTQYVPMLERKEVSKYSDIQRSLYDRPASYKKKSMLDSEVKNLLSDDNSEGLTLLDLL 796

Query: 1166 SFSYQVAKGMAFLASKN-------AR---------------------------------- 1222
            SF+YQVA+GM FLASKN       AR                                  
Sbjct: 797  SFTYQVARGMEFLASKNCVHRDLAARNVLLAQGKIVKICDFGLARDIMHDSNYVSKGSTF 856

Query: 1223 LPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRML 1402
            LPVKWMAPESIF+ +YT  SDVWSYGI LWE+FSLG +PYPGM VDS FY  IK G+RM 
Sbjct: 857  LPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMMVDSTFYNKIKSGYRMA 916

Query: 1403 SPEHAPVEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISESTNHIYSNLANCSPHRENPA 1582
             P+HA  E+Y+IM  CW ++P KRP+F  + +++E  +       Y  +       ++PA
Sbjct: 917  KPDHATSEVYEIMVKCWHSEPEKRPSFYHLSEIVENLLPGQYKKSYEKIHLDFLKSDHPA 976

Query: 1583 V 1585
            V
Sbjct: 977  V 977


>ref|NP_001003382.1| beta-type platelet-derived growth factor receptor precursor [Canis
            lupus familiaris].
          Length = 1103

 Score =  344 bits (883), Expect = 2e-94
 Identities = 222/615 (36%), Positives = 314/615 (51%), Gaps = 87/615 (14%)
 Frame = +2

Query: 2    LTRLKGTEGGTYTFLVSNADVNSSVTLNVYVNTKPEIL----THDRLMNGMLQCVAAGFP 169
            L R+K  E G YT    + D  + ++  + VN    +L    +H       ++C   G P
Sbjct: 383  LVRVKVAEAGYYTMRAFHEDAEAQLSFQLQVNVPVRVLELSESHPASGEQTVRCRGRGMP 442

Query: 170  EPTIDWYFCPGTEQRCSVPVGPVDVQIQNSSVSPFGKLVIH----------SSIDYSAFK 319
            +P + W  C   + RC   + P  +   +   S     V +          S++      
Sbjct: 443  QPHLTWSTCSDLK-RCPRELPPTPLGNSSEEESQLETNVTYWPEDQEFEVVSTLRLRRVD 501

Query: 320  HNGTVECRAYNDVGKSSAFFNFAFKEQIHAHTL-FTPLLIGFVIAAGMMCII-VMILTYK 493
               +V C  +N +G          +  +  H+L F  ++I  ++A  ++ II ++IL   
Sbjct: 502  QPLSVRCTLHNLLGHDMQ------EVTVVPHSLPFKVVVISAILALVVLTIISLIILIML 555

Query: 494  YLQKPMYEVQWKVVEEIN--GNNYVYIDPTQLPYDHKWEFPRNRLSFGKTLGAGAFGKVV 667
            + +KP YE++WKV+E ++  G+ Y+Y+DP QLPYD  WE PR++L  G+TLG+GAFG+VV
Sbjct: 556  WQKKPRYEIRWKVIESVSSDGHEYIYVDPMQLPYDSTWELPRDQLVLGRTLGSGAFGQVV 615

Query: 668  EATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGG 847
            EATA+GL  S A M VAVKMLK +A  +E++ALMSELK++S+LG H+N+VNLLGACT GG
Sbjct: 616  EATAHGLSHSQATMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNVVNLLGACTKGG 675

Query: 848  PTLVITEYCCYGDLLNFLRRKRDSF--ICSKQEDHAEAALYKNL------LHSKESSCSD 1003
            P  +ITEYC YGDL+++L R + +F  +CS +     A LY N       L S  S   +
Sbjct: 676  PIYIITEYCRYGDLVDYLHRNKHTFLQLCSDKRRPPSAELYSNALPAGLPLPSHVSLPGE 735

Query: 1004 STNEYM--------------DMKPGVSYVVPTKADKRRSARIGSYIERDVTP------AI 1123
            S   YM              DMK GV Y     AD   S+ +  Y     T       A 
Sbjct: 736  SDGGYMDMSKDESVDYVPMLDMKGGVKY-----ADIESSSYMAPYDNYVPTAPERTCRAT 790

Query: 1124 MXXXXXXXXXXXXXSFSYQVAKGMAFLASKN-------AR-------------------- 1222
            +              FSYQVA GM FLASKN       AR                    
Sbjct: 791  LINESPVLSYTDLVGFSYQVANGMEFLASKNCVHRDLAARNVLICEGKLVKICDFGLARD 850

Query: 1223 --------------LPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVD 1360
                          LP+KWMAPESIFN +YT  SDVWS+GI LWE+F+LG +PYP +P++
Sbjct: 851  IMRDSNYISKGSTFLPLKWMAPESIFNSLYTTLSDVWSFGILLWEIFTLGGTPYPELPMN 910

Query: 1361 SKFYKMIKEGFRMLSPEHAPVEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISESTNHIY 1540
             +FY  IK G+RM  P HA  E+Y+IM+ CW+     RP F Q+V L+E+ + E     Y
Sbjct: 911  EQFYNAIKRGYRMAQPAHASDEIYEIMQKCWEEKFEIRPPFSQLVLLLERLLGEGYKKKY 970

Query: 1541 SNLANCSPHRENPAV 1585
              +       ++PAV
Sbjct: 971  QQVDEEFLRSDHPAV 985


>ref|NP_001018647.1| FL cytokine receptor [Canis lupus familiaris].
          Length = 993

 Score =  325 bits (834), Expect = 9e-89
 Identities = 202/565 (35%), Positives = 287/565 (50%), Gaps = 58/565 (10%)
 Frame = +2

Query: 29   GTYTFLVSNADVNSSVTLNVYVNTKPEILTHDRLMNGMLQCVAAGFPEPTIDWYFCPGTE 208
            G Y F   N D   +    + +  KP++  +         C + G+P P+  W  C    
Sbjct: 414  GEYIFHAENDDAEFTKMFTLNIRRKPQVQANTSASQA--SCSSDGYPLPSWTWKKCSDKS 471

Query: 209  QRCSVPVGPVDVQIQNSSVSPFGKLVIHSSIDYSAFKHNGTVECRAYNDVGKS--SAFFN 382
              C+  +    +  + ++   FG+    S+++ S       V+C AYN +G S  +   N
Sbjct: 472  PNCTEEITE-GIWNKKANRKVFGQWTSSSTLNMSEAVKGFLVKCCAYNSLGTSCETILLN 530

Query: 383  ----FAFKEQIHAHTLFTPLLIGFVIAAGMMCIIVMILTYKYLQKPMYEVQWKVVEEING 550
                F F +   +      L + F+       I+ M++ +KY ++  YE Q ++V+    
Sbjct: 531  SPGPFPFIQDNVSFYATVGLCLPFI------AILTMLICHKYKKQFRYESQLQMVQVTGS 584

Query: 551  --NNYVYIDPTQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVK 724
              N Y YID  +  YD KWEFPR  L FGK LG+GAFGKV+ ATAYG+ K+  ++ VAVK
Sbjct: 585  LDNEYFYIDFREYEYDLKWEFPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVK 644

Query: 725  MLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLR 904
            MLK  A  +EREALMSELK++++LGNH NIVNLLGACT+ GP  +I EYCCYGDLLN+LR
Sbjct: 645  MLKEKADSSEREALMSELKMMTHLGNHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLR 704

Query: 905  RKRDSFICSKQEDHAE--AALYKNLLHSKESSCSDSTN-------EYMDMKPGVSYVVPT 1057
             KR+ F  +  E   E   + Y        SS   S         +++    G S+    
Sbjct: 705  NKREKFHRTWTEIFKEHNFSFYPTFQSHPNSSMPGSREVQIQQDLDHISGLNGNSFQSED 764

Query: 1058 KADKRRSARIGSYIERDVTPAIMXXXXXXXXXXXXXSFSYQVAKGMAFLASK-------- 1213
            + +     R+    E D+                   F+YQVAKGM FL  K        
Sbjct: 765  EIEYENQKRLEE--EEDLN---------VLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLA 813

Query: 1214 ---------------------------------NARLPVKWMAPESIFNCVYTFESDVWS 1294
                                             NARLPVKWMAPES+F  +YT +SDVWS
Sbjct: 814  ARNVLVTHGKVVKICDFGLARDIMSDSNYVIRGNARLPVKWMAPESLFEGIYTIKSDVWS 873

Query: 1295 YGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPVEMYDIMKTCWDADPLKR 1474
            YGI LWE+FSLG +PYPG+PVD+ FYK+I+ GF+M  P +A  E+Y IM++CW  D  KR
Sbjct: 874  YGILLWEIFSLGVNPYPGIPVDANFYKLIQSGFKMDQPFYATEEIYFIMQSCWAFDSRKR 933

Query: 1475 PTFKQIVQLIEKQISESTNHIYSNL 1549
            P+F  +   +  Q++++   +Y N+
Sbjct: 934  PSFPNLTSFLGCQLADAEEAMYQNM 958


>ref|XP_534520.2| PREDICTED: similar to Vascular endothelial growth factor receptor 1
            precursor (VEGFR-1) (Vascular permeability factor
            receptor) (Tyrosine-protein kinase receptor FLT) (Flt-1)
            (Tyrosine-protein kinase FRT) (Fms-like tyrosine kinase
            1) [Canis familiaris].
          Length = 1337

 Score =  268 bits (684), Expect = 2e-71
 Identities = 180/514 (35%), Positives = 260/514 (50%), Gaps = 62/514 (12%)
 Frame = +2

Query: 143  LQCVAAGFPEPTIDWYFCPGT-EQRCSVPVGPVDVQIQNSSVSPFGKLVIHSSIDYSAFK 319
            L C A G PEP I W+      +Q   + +GP    +    V+   + V H      A  
Sbjct: 680  LDCPATGVPEPEITWFKNNHKIQQEPGIILGPGSSTLFIERVTEEDEGVYHCK----ATN 735

Query: 320  HNGTVECRAYNDVGKSSAFFNFAFKEQIHAHTLFTPLLIGFVIAAGMMCIIVMILTYKYL 499
              G+VE  AY  V  +S   N               + +     A  +  +++ L  + L
Sbjct: 736  QKGSVESSAYLTVQGTSDKSNLEL------------ITLTCTCVAATLFWLLLTLFIRKL 783

Query: 500  QKPMYEVQWKVVEEINGNNYVYIDPT--QLPYD-HKWEFPRNRLSFGKTLGAGAFGKVVE 670
            ++   E++   +  I   + V +D    +LPYD  KWEF R RL  GK+LG GAFGKVV+
Sbjct: 784  KRSSSEIKTDYLSIIMDPDEVPLDEQCERLPYDASKWEFARERLKLGKSLGRGAFGKVVQ 843

Query: 671  ATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACT-IGG 847
            A+A+G+ KS    TVAVKMLK  A  +E +ALM+ELK+L+++G+H+N+VNLLGACT  GG
Sbjct: 844  ASAFGIKKSPTCRTVAVKMLKEGATASEYKALMTELKILTHIGHHLNVVNLLGACTKQGG 903

Query: 848  PTLVITEYCCYGDLLNFLRRKRDSFICSKQEDHAEAALY----------------KNLLH 979
            P +VI EYC YG+L N+L+ KRD F  +K     +AAL+                K  L 
Sbjct: 904  PLMVIVEYCKYGNLSNYLKSKRDLFFLNK-----DAALHMEPKKEKMEPDPEQDKKQRLD 958

Query: 980  SKESSCSDSTNEYMDMKPGVSYVVPTKADKRRSARIGSYIERDVTPAIMXXXXXXXXXXX 1159
            S  SS S +++ + + K        + +D         + ++ +T               
Sbjct: 959  SVTSSESFASSGFQEDK--------SLSDVEEEEDSDDFYKQPIT------------MED 998

Query: 1160 XXSFSYQVAKGMAFLASK-----------------------------------------N 1216
              S+S+QVA+GM FL+S+                                         +
Sbjct: 999  LISYSFQVARGMEFLSSRKCIHRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRKGD 1058

Query: 1217 ARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFR 1396
             RLP+KWMAPESIF+ +Y+ +SDVWSYG+ LWE+FSLG SPYPG+ +D  F   +KEG R
Sbjct: 1059 TRLPLKWMAPESIFDKIYSTKSDVWSYGVLLWEIFSLGGSPYPGVQMDEDFCSRLKEGMR 1118

Query: 1397 MLSPEHAPVEMYDIMKTCWDADPLKRPTFKQIVQ 1498
            M +PE+A  E+Y IM  CW  DP +RP F ++V+
Sbjct: 1119 MRAPEYATPEIYQIMLDCWHKDPKERPRFAELVE 1152


>ref|NP_001003336.1| fibroblast growth factor receptor 2 [Canis lupus familiaris].
          Length = 707

 Score =  227 bits (579), Expect = 3e-59
 Identities = 125/327 (38%), Positives = 189/327 (57%), Gaps = 2/327 (0%)
 Frame = +2

Query: 578  QLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDA--AMTVAVKMLKPSAHLT 751
            +LP D KWEFPR++L+ GK LG G FG+VV A A G+ K     A+TVAVKMLK  A   
Sbjct: 353  ELPEDPKWEFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKEKPKEAVTVAVKMLKDDATEK 412

Query: 752  EREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICS 931
            +   L+SE++++  +G H NI+NLLGACT  GP  VI EY   G+L  +LR +R   +  
Sbjct: 413  DLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGM-- 470

Query: 932  KQEDHAEAALYKNLLHSKESSCSDSTNEYMDMKPGVSYVVPTKADKRRSARIGSYIERDV 1111
                  E +   N +  ++ +  D  +    +  G+ Y+   K            I RD+
Sbjct: 471  ------EYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKC-----------IHRDL 513

Query: 1112 TPAIMXXXXXXXXXXXXXSFSYQVAKGMAFLASKNARLPVKWMAPESIFNCVYTFESDVW 1291
                +               +  +     +  + N RLPVKWMAPE++F+ VYT +SDVW
Sbjct: 514  AARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVW 573

Query: 1292 SYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPVEMYDIMKTCWDADPLK 1471
            S+G+ +WE+F+LG SPYPG+PV+ + +K++KEG RM  P +   E+Y +M+ CW A P +
Sbjct: 574  SFGVLMWEIFTLGGSPYPGIPVE-ELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQ 632

Query: 1472 RPTFKQIVQLIEKQISESTNHIYSNLA 1552
            RPTFKQ+V+ +++ ++ +TN  Y +L+
Sbjct: 633  RPTFKQLVEDLDRILTLTTNEEYLDLS 659


>ref|XP_545926.2| PREDICTED: similar to Fibroblast growth factor receptor 3 precursor
            (FGFR-3) [Canis familiaris].
          Length = 833

 Score =  224 bits (571), Expect = 3e-58
 Identities = 125/331 (37%), Positives = 188/331 (56%), Gaps = 2/331 (0%)
 Frame = +2

Query: 566  IDPTQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAA--MTVAVKMLKPS 739
            +   +LP D KWE  R RL+ GK LG G FG+VV A A G+ K  AA  +TVAVKMLK  
Sbjct: 481  VSELELPADPKWELSRARLTLGKPLGEGCFGQVVMAEAIGIDKDRAAKPVTVAVKMLKDD 540

Query: 740  AHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDS 919
            A   +   L+SE++++  +G H NI+NLLGACT GGP  V+ EY   G+L  +LR +R  
Sbjct: 541  ATDKDLSDLVSEMEMMKMIGRHKNIINLLGACTQGGPLYVLVEYAAKGNLREYLRARRPP 600

Query: 920  FICSKQEDHAEAALYKNLLHSKESSCSDSTNEYMDMKPGVSYVVPTKADKRRSARIGSYI 1099
             +        + +     L  ++ +C D  +    +  G+ Y+   K            I
Sbjct: 601  GM--------DYSFDTCKLPEEQLTCKDLVSCAYQVARGMEYLASQKC-----------I 641

Query: 1100 ERDVTPAIMXXXXXXXXXXXXXSFSYQVAKGMAFLASKNARLPVKWMAPESIFNCVYTFE 1279
             RD+    +               +  V     +  + N RLPVKWMAPE++F+ VYT +
Sbjct: 642  HRDLAARNVLVTEDNVMKIADFGLARDVHNLDYYKKTTNGRLPVKWMAPEALFDRVYTHQ 701

Query: 1280 SDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPVEMYDIMKTCWDA 1459
            SDVWS+G+ LWE+F+LG SPYPG+PV+ + +K++KEG RM  P +   ++Y IM+ CW A
Sbjct: 702  SDVWSFGVLLWEIFTLGGSPYPGIPVE-ELFKLLKEGHRMDKPANCTHDLYMIMRECWHA 760

Query: 1460 DPLKRPTFKQIVQLIEKQISESTNHIYSNLA 1552
             P +RPTFKQ+V+ +++ ++ ++   Y +L+
Sbjct: 761  VPSQRPTFKQLVEDLDRILTVTSTDEYLDLS 791


>ref|XP_848780.1| PREDICTED: similar to fibroblast growth factor receptor 1 isoform 1
            precursor isoform 3 [Canis familiaris].
          Length = 820

 Score =  218 bits (554), Expect = 3e-56
 Identities = 123/329 (37%), Positives = 183/329 (55%), Gaps = 4/329 (1%)
 Frame = +2

Query: 578  QLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKS--DAAMTVAVKMLKPSAHLT 751
            +LP D +WE PR+RL  GK LG G FG+VV A A GL K   +    VAVKMLK  A   
Sbjct: 462  ELPEDPRWELPRDRLVLGKPLGEGCFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEK 521

Query: 752  EREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFI-- 925
            +   L+SE++++  +G H NI+NLLGACT  GP  VI EY   G+L  +L+ +R   +  
Sbjct: 522  DLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEY 581

Query: 926  CSKQEDHAEAALYKNLLHSKESSCSDSTNEYMDMKPGVSYVVPTKADKRRSARIGSYIER 1105
            C     + E  L          S  D  +    +  G+ Y+   K            I R
Sbjct: 582  CYNPSHNPEEQL----------SSKDLVSCAYQVARGMEYLASKKC-----------IHR 620

Query: 1106 DVTPAIMXXXXXXXXXXXXXSFSYQVAKGMAFLASKNARLPVKWMAPESIFNCVYTFESD 1285
            D+    +               +  +     +  + N RLPVKWMAPE++F+ +YT +SD
Sbjct: 621  DLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSD 680

Query: 1286 VWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPVEMYDIMKTCWDADP 1465
            VWS+G+ LWE+F+LG SPYPG+PV+ + +K++KEG RM  P +   E+Y +M+ CW A P
Sbjct: 681  VWSFGVLLWEIFTLGGSPYPGVPVE-ELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVP 739

Query: 1466 LKRPTFKQIVQLIEKQISESTNHIYSNLA 1552
             +RPTFKQ+V+ +++ ++ ++N  Y +L+
Sbjct: 740  SQRPTFKQLVEDLDRIVALTSNQEYLDLS 768


>ref|XP_857002.1| PREDICTED: similar to fibroblast growth factor receptor 1 isoform 3
            precursor isoform 9 [Canis familiaris].
          Length = 731

 Score =  218 bits (554), Expect = 3e-56
 Identities = 123/329 (37%), Positives = 183/329 (55%), Gaps = 4/329 (1%)
 Frame = +2

Query: 578  QLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKS--DAAMTVAVKMLKPSAHLT 751
            +LP D +WE PR+RL  GK LG G FG+VV A A GL K   +    VAVKMLK  A   
Sbjct: 373  ELPEDPRWELPRDRLVLGKPLGEGCFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEK 432

Query: 752  EREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFI-- 925
            +   L+SE++++  +G H NI+NLLGACT  GP  VI EY   G+L  +L+ +R   +  
Sbjct: 433  DLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEY 492

Query: 926  CSKQEDHAEAALYKNLLHSKESSCSDSTNEYMDMKPGVSYVVPTKADKRRSARIGSYIER 1105
            C     + E  L          S  D  +    +  G+ Y+   K            I R
Sbjct: 493  CYNPSHNPEEQL----------SSKDLVSCAYQVARGMEYLASKKC-----------IHR 531

Query: 1106 DVTPAIMXXXXXXXXXXXXXSFSYQVAKGMAFLASKNARLPVKWMAPESIFNCVYTFESD 1285
            D+    +               +  +     +  + N RLPVKWMAPE++F+ +YT +SD
Sbjct: 532  DLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSD 591

Query: 1286 VWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPVEMYDIMKTCWDADP 1465
            VWS+G+ LWE+F+LG SPYPG+PV+ + +K++KEG RM  P +   E+Y +M+ CW A P
Sbjct: 592  VWSFGVLLWEIFTLGGSPYPGVPVE-ELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVP 650

Query: 1466 LKRPTFKQIVQLIEKQISESTNHIYSNLA 1552
             +RPTFKQ+V+ +++ ++ ++N  Y +L+
Sbjct: 651  SQRPTFKQLVEDLDRIVALTSNQEYLDLS 679


  Database: RefSeq49_CP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 18,874,504
  Number of sequences in database:  33,336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33336
Number of Hits to DB: 95,407,156
Number of extensions: 2539955
Number of successful extensions: 9762
Number of sequences better than 1.0e-05: 205
Number of HSP's gapped: 9289
Number of HSP's successfully gapped: 305
Length of query: 788
Length of database: 18,874,504
Length adjustment: 111
Effective length of query: 677
Effective length of database: 15,174,208
Effective search space: 10272938816
Effective search space used: 10272938816
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)

Search to RefSeqSP_Rel49

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-012635
         (2366 letters)

Database: RefSeq49_SP.fasta 
           24,897 sequences; 11,343,932 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_001037990.1| mast/stem cell growth factor receptor precur...  1074   0.0  
Alignment   gi|XP_003124148.2| PREDICTED: macrophage colony-stimulating fac...   452   e-127
Alignment   gi|XP_003354407.1| PREDICTED: beta-type platelet-derived growth...   421   e-118
Alignment   gi|XP_003130961.2| PREDICTED: FL cytokine receptor-like [Sus sc...   323   2e-88
Alignment   gi|XP_001925775.3| PREDICTED: LOW QUALITY PROTEIN: vascular end...   265   8e-71
Alignment   gi|XP_003129035.2| PREDICTED: vascular endothelial growth facto...   252   6e-67
Alignment   gi|XP_003123684.1| PREDICTED: vascular endothelial growth facto...   252   7e-67
Alignment   gi|NP_001093394.1| fibroblast growth factor receptor 2 [Sus scr...   228   1e-59
Alignment   gi|XP_003356969.1| PREDICTED: alpha-type platelet-derived growt...   220   2e-57
Alignment   gi|XP_003123731.1| PREDICTED: fibroblast growth factor receptor...   219   5e-57

>ref|NP_001037990.1| mast/stem cell growth factor receptor precursor [Sus scrofa].
          Length = 972

 Score = 1074 bits (2777), Expect = 0.0
 Identities = 537/593 (90%), Positives = 537/593 (90%), Gaps = 41/593 (6%)
 Frame = +2

Query: 2    LTRLKGTEGGTYTFLVSNADVNSSVTLNVYVNTKPEILTHDRLMNGMLQCVAAGFPEPTI 181
            LTRLKGTEGGTYTFLVSNADVNSSVT NVYVNTKPEILTHDRLMNGMLQCVAAGFPEPTI
Sbjct: 379  LTRLKGTEGGTYTFLVSNADVNSSVTFNVYVNTKPEILTHDRLMNGMLQCVAAGFPEPTI 438

Query: 182  DWYFCPGTEQRCSVPVGPVDVQIQNSSVSPFGKLVIHSSIDYSAFKHNGTVECRAYNDVG 361
            DWYFCPGTEQRCSVPVGPVDVQIQNSSVSPFGKLVIHSSIDYSAFKHNGTVECRAYNDVG
Sbjct: 439  DWYFCPGTEQRCSVPVGPVDVQIQNSSVSPFGKLVIHSSIDYSAFKHNGTVECRAYNDVG 498

Query: 362  KSSAFFNFAFKEQIHAHTLFTPLLIGFVIAAGMMCIIVMILTYKYLQKPMYEVQWKVVEE 541
            KSSAFFNFAFKEQIHAHTLFTPLLIGFVIAAGMMCIIVMILTYKYLQKPMYEVQWKVVEE
Sbjct: 499  KSSAFFNFAFKEQIHAHTLFTPLLIGFVIAAGMMCIIVMILTYKYLQKPMYEVQWKVVEE 558

Query: 542  INGNNYVYIDPTQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAV 721
            INGNNYVYIDPTQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAV
Sbjct: 559  INGNNYVYIDPTQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAV 618

Query: 722  KMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFL 901
            KMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFL
Sbjct: 619  KMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFL 678

Query: 902  RRKRDSFICSKQEDHAEAALYKNLLHSKESSCSDSTNEYMDMKPGVSYVVPTKADKRRSA 1081
            RRKRDSFICSKQEDHAEAALYKNLLHSKESSCSDSTNEYMDMKPGVSYVVPTKADKRRSA
Sbjct: 679  RRKRDSFICSKQEDHAEAALYKNLLHSKESSCSDSTNEYMDMKPGVSYVVPTKADKRRSA 738

Query: 1082 RIGSYIERDVTPAIMXXXXXXXXXXXXXSFSYQVAKGMAFLASK---------------- 1213
            RIGSYIERDVTPAIM             SFSYQVAKGMAFLASK                
Sbjct: 739  RIGSYIERDVTPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTH 798

Query: 1214 -------------------------NARLPVKWMAPESIFNCVYTFESDVWSYGIFLWEL 1318
                                     NARLPVKWMAPESIFNCVYTFESDVWSYGIFLWEL
Sbjct: 799  GRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWEL 858

Query: 1319 FSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPVEMYDIMKTCWDADPLKRPTFKQIVQ 1498
            FSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAP EMYDIMKTCWDADPLKRPTFKQIVQ
Sbjct: 859  FSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQ 918

Query: 1499 LIEKQISESTNHIYSNLANCSPHRENPAVDHSVRINSVGSSASSTQPLLVHED 1657
            LIEKQISESTNHIYSNLANCSPHRENPAVDHSVRINSVGSSASSTQPLLVHED
Sbjct: 919  LIEKQISESTNHIYSNLANCSPHRENPAVDHSVRINSVGSSASSTQPLLVHED 971


>ref|XP_003124148.2| PREDICTED: macrophage colony-stimulating factor 1 receptor, partial
            [Sus scrofa].
          Length = 941

 Score =  452 bits (1163), Expect = e-127
 Identities = 258/588 (43%), Positives = 341/588 (57%), Gaps = 62/588 (10%)
 Frame = +2

Query: 2    LTRLKGTEGGTYTFLVSNADVNSSVTLNVYVNTKPEILTHDRLMNGM--LQCVAAGFPEP 175
            L RLK +E G Y+FL  NA     +T  + +   PE+     L+NG   L C A+G+P+P
Sbjct: 371  LPRLKPSEAGRYSFLARNARGEGVLTFELTLLYPPEVRITWSLVNGSRALVCQASGYPQP 430

Query: 176  TIDWYFCPGTEQRCSVPVGPVDVQIQNS------SVSPFGKLVIHSSIDYSAFKHNGTVE 337
             + W +C G   RC        V +Q +      S  PF K  +   +     + N T E
Sbjct: 431  NVTWVWCGGHTDRCE----GAGVLVQEALGPEVLSQEPFHKATVQRLLAVGTLERNRTYE 486

Query: 338  CRAYNDVGKSS-AFFNFAFKEQIHA--HTLFTPLLIGFVIAAGMMCIIVMILTYKYLQKP 508
            CRA N +G SS AF   +   Q+H+    LFTP+L+  V    ++ +++++L YKY QKP
Sbjct: 487  CRACNSLGNSSHAFQPVSVAAQVHSPDEPLFTPVLVACVSIMALLLLLLLLLLYKYKQKP 546

Query: 509  MYEVQWKVVEEINGNNYVYIDPTQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGL 688
             Y+V+WK++E   GN+Y +IDPTQLPY  KWEFPRN+L FGKTLGAGAFGKVVEATA+GL
Sbjct: 547  KYQVRWKIIESFAGNSYTFIDPTQLPYSEKWEFPRNKLQFGKTLGAGAFGKVVEATAFGL 606

Query: 689  IKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITE 868
             + DA + VAVKMLK +AH  E+EALMSELK++S+LG H N VNLLGACT GGP LVITE
Sbjct: 607  GQEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGPHENTVNLLGACTHGGPVLVITE 666

Query: 869  YCCYGDLLNFLRRKRDSFI---CSKQEDHAEAALYKNLLHSKESSCSDS------TNEYM 1021
            YCCYGDLLNFLRRK ++ +    +  +       YKN+   K+ +  DS       + Y+
Sbjct: 667  YCCYGDLLNFLRRKAEAMLGPGLNPGQSPEPGPGYKNIPLEKKYTRRDSGFSSQGVDAYV 726

Query: 1022 DMKPGVSYVVPTKADKRRSARIGSYIERDVTPAIMXXXXXXXXXXXXXSFSYQVAKGMAF 1201
            +M+P     V T      S+   S+ E+D+                   FS QVA+GMAF
Sbjct: 727  EMRP-----VST------SSSNDSFSEQDLD----KEDGRPLELCDLLRFSSQVAQGMAF 771

Query: 1202 LASK-----------------------------------------NARLPVKWMAPESIF 1258
            LASK                                         NARLPVKWMAPESIF
Sbjct: 772  LASKNCIHRDVAARNVLLTSGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIF 831

Query: 1259 NCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPVEMYDI 1438
            +CVYT +SDVWSYGI LWE+FSLG +PYPG+ V+SKFYK++K+G++M  P  AP  +Y I
Sbjct: 832  DCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQMAQPAFAPKNIYSI 891

Query: 1439 MKTCWDADPLKRPTFKQIVQLIEKQI-SESTNHIYSNLANCSPHRENP 1579
            M+ CW  +P +RPTF+QI  L+++Q   +     YSNL + S     P
Sbjct: 892  MQACWALEPTRRPTFQQICSLLQEQSHGDQRARDYSNLPSSSSSSSEP 939


>ref|XP_003354407.1| PREDICTED: beta-type platelet-derived growth factor receptor-like
            [Sus scrofa].
          Length = 913

 Score =  421 bits (1083), Expect = e-118
 Identities = 248/604 (41%), Positives = 328/604 (54%), Gaps = 76/604 (12%)
 Frame = +2

Query: 2    LTRLKGTEGGTYTFLVSNADVNSSVTLNVYVNTKPEILTHDRLMNGM--LQCVAAGFPEP 175
            L RLK +E G Y+FL  NA     +T  + +   PE+     L+NG   L C A+G+P+P
Sbjct: 194  LPRLKPSEAGRYSFLARNARGEGVLTFELTLLYPPEVRITWSLVNGSRALVCQASGYPQP 253

Query: 176  TIDWYFCPGTEQRCSVPVGPVDVQIQNS------SVSPFGKLVIHSSIDYSAFKHNGTVE 337
             + W +C G   RC        V +Q +      S  PF K  +   +     + N T E
Sbjct: 254  NVTWVWCGGHTDRCE----GAGVLVQEALGPEVLSQEPFHKATVQRLLAVGTLERNRTYE 309

Query: 338  CRAYNDVGKSS-AFFNFAFKEQIHA--HTLFTPLLIGFVIAAGMMCIIVMILTYKYLQKP 508
            C A N +G SS AF   +   Q+H+    LFTP+L+  V    ++ +++++L YKY QKP
Sbjct: 310  CWARNSLGNSSHAFQPVSVAAQVHSPDEPLFTPVLVACVSIMALLLLLLLLLLYKYKQKP 369

Query: 509  MYEVQWKVVEEINGNNYVYIDPTQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGL 688
             Y+V+WK++E   GN+Y +IDPTQLPY  KWEFPRN+L FGKTLGAGAFGKVVEATA+GL
Sbjct: 370  KYQVRWKIIESFAGNSYTFIDPTQLPYSEKWEFPRNKLQFGKTLGAGAFGKVVEATAFGL 429

Query: 689  IKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITE 868
             + DA + VAVKMLK +AH  E+EALMSELK++S+LG H N VNLLGACT GGP  +ITE
Sbjct: 430  GQEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGPHENTVNLLGACTHGGPIYIITE 489

Query: 869  YCCYGDLLNFLRRKRDSFI--CSKQEDHAEAALYKNL------LHSKESSCSDSTNEYMD 1024
            YC YGDL++FL R + +F+  CS +     A LY N       L S  +   +S   YMD
Sbjct: 490  YCRYGDLVDFLHRNKHTFLQRCSDKRRPPSAELYSNALPVGLPLPSHVALPGESDGGYMD 549

Query: 1025 MKPGVSYVVPTKADKRRSAR----------------IGSYIERDVTPAIMXXXXXXXXXX 1156
            M    S       D R   +                + S  ER   P ++          
Sbjct: 550  MSKDESVDYVPMLDMRGDVKYADIQPSGYMAPYDNCVPSAPERTCRPTLI-NESPVLSYT 608

Query: 1157 XXXSFSYQVAKGMAFLASKN-------AR------------------------------- 1222
                FSYQVA GM FLASKN       AR                               
Sbjct: 609  DLVGFSYQVANGMEFLASKNCVHRDLAARNVLICEGKLVKICDFGLARDIMRDSNYISKG 668

Query: 1223 ---LPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGF 1393
               LP+KWMAPESIFN +YT  SDVWS+GI LWE+F+LG +PYP +P++ +FY  IK G+
Sbjct: 669  STFLPLKWMAPESIFNSLYTTLSDVWSFGILLWEIFTLGGTPYPELPMNEQFYNAIKRGY 728

Query: 1394 RMLSPEHAPVEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISESTNHIYSNLANCSPHRE 1573
            RM  P HA  E+Y+IM+ CW+     RP F Q+V L+E+ + E     Y  +       +
Sbjct: 729  RMAQPAHASDEIYEIMQKCWEEKFEIRPPFSQLVLLLERLLGEGYKKKYQQVDEEFLRSD 788

Query: 1574 NPAV 1585
            +PAV
Sbjct: 789  HPAV 792


>ref|XP_003130961.2| PREDICTED: FL cytokine receptor-like [Sus scrofa].
          Length = 594

 Score =  323 bits (829), Expect = 2e-88
 Identities = 202/564 (35%), Positives = 287/564 (50%), Gaps = 58/564 (10%)
 Frame = +2

Query: 29   GTYTFLVSNADVNSSVTLNVYVNTKPEILTHDRLMNGMLQCVAAGFPEPTIDWYFCPGTE 208
            G Y F   N D   +    + +  KP++L           C + G+P P+  W  C    
Sbjct: 18   GQYIFHAENDDAQFTKMFTLNIRRKPQVLAEASASQA--SCSSDGYPLPSWTWKKCSDKS 75

Query: 209  QRCSVPVGPVDVQIQNSSVSPFGKLVIHSSIDYSAFKHNGTVECRAYNDVGKS--SAFFN 382
              C+  +    +  + ++   FG+ +  S+++ S       V+C AYN +G S  +   N
Sbjct: 76   PNCTEEITE-GIWNKKANRKVFGQWISSSTLNMSEAVKGFLVKCCAYNSLGTSCETILLN 134

Query: 383  ----FAFKEQIHAHTLFTPLLIGFVIAAGMMCIIVMILTYKYLQKPMYEVQWKVVEEING 550
                F F +   +      L + F+       ++ M++ +KY ++  YE Q ++V+    
Sbjct: 135  SPGPFPFIQDNISFYATIGLCLPFI------AVLTMLICHKYKKRFRYESQLQMVQVTGS 188

Query: 551  --NNYVYIDPTQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVK 724
              N+Y YID  +  YD KWEFPR  L FGK LG+GAFGKV+ ATAYG+ K+  ++ VAVK
Sbjct: 189  LDNDYFYIDFREYEYDLKWEFPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVK 248

Query: 725  MLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLR 904
            MLK  A  +EREALMSELK++++LG+H NIVNLLGACT+ GP  +I EYCCYGDLLN+LR
Sbjct: 249  MLKEKADSSEREALMSELKMMTHLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLR 308

Query: 905  RKRDSFICSKQEDHAE--AALYKNLLHSKESSC--SDSTNEYMDMKP-----GVSYVVPT 1057
             KR+ F  +  E   E   + Y        SS   S     + D  P     G S+    
Sbjct: 309  SKREKFHRTWTEIFKEHNFSFYPTFQSHPNSSMPGSREVQIHPDSDPISGFNGNSFQSED 368

Query: 1058 KADKRRSARIGSYIERDVTPAIMXXXXXXXXXXXXXSFSYQVAKGMAFLASK-------- 1213
            + +     R+    E D+                   F+YQVAKGM FL  K        
Sbjct: 369  EIEYENQKRLEE--EEDLN---------VLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLA 417

Query: 1214 ---------------------------------NARLPVKWMAPESIFNCVYTFESDVWS 1294
                                             NARLPVKWMAPES+F  +YT +SDVWS
Sbjct: 418  ARNVLVTHGKVVKIGDFGLARDIMSDSNYVIRGNARLPVKWMAPESLFEGIYTIKSDVWS 477

Query: 1295 YGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPVEMYDIMKTCWDADPLKR 1474
            YGI LWE+FSLG +PYPG+P D+ FYK+I+ GF+M  P +A  E+Y IM++CW  D  KR
Sbjct: 478  YGILLWEIFSLGVNPYPGIPADANFYKLIQSGFKMDQPFYATEEIYFIMQSCWAFDSRKR 537

Query: 1475 PTFKQIVQLIEKQISESTNHIYSN 1546
            P+F  +   +  Q++++   +Y N
Sbjct: 538  PSFPNLTSFLGCQLADAEEAMYQN 561


>ref|XP_001925775.3| PREDICTED: LOW QUALITY PROTEIN: vascular endothelial growth factor
            receptor 1 [Sus scrofa].
          Length = 1347

 Score =  265 bits (677), Expect = 8e-71
 Identities = 184/509 (36%), Positives = 260/509 (51%), Gaps = 53/509 (10%)
 Frame = +2

Query: 143  LQCVAAGFPEPTIDWYFCPGT-EQRCSVPVGPVDVQIQNSSVSPFGKLVIHSSIDYSAFK 319
            L C A G PEP I W+      +Q   + +GP        S + F        I+    +
Sbjct: 688  LDCHANGVPEPQITWFKNNHKIQQEPGIILGP-------GSSTLF--------IERVTXE 732

Query: 320  HNGTVECRAYNDVG--KSSAFFNFAFKEQIHAHTLFTPLLIGFVIAAGMMCIIVMILTYK 493
              G   CRA N  G  +SSA+ +        +  L T  L    +AA +  +++ +   K
Sbjct: 733  DEGVYHCRATNQKGSAESSAYLSVQGTSDKSSLELIT--LTCTCVAATLFWLLLTLFIRK 790

Query: 494  YLQKPMYEVQWKVVEEINGNNYVYIDPT--QLPYD-HKWEFPRNRLSFGKTLGAGAFGKV 664
             L++   E++   +  I   + V +D    +LPYD  KWEF R RL  GK+LG GAFGKV
Sbjct: 791  -LKRSSSEIKADYLSIIMDPDEVPLDEQCERLPYDASKWEFARERLKLGKSLGRGAFGKV 849

Query: 665  VEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACT-I 841
            V+A+A+G+ KS    TVAVKMLK  A  +E +ALM+ELK+L+++G+H+N+VNLLGACT  
Sbjct: 850  VQASAFGIKKSPTCRTVAVKMLKEGATASEYKALMTELKILTHIGHHLNVVNLLGACTKQ 909

Query: 842  GGPTLVITEYCCYGDLLNFLRRKRDSFICSKQEDHAEAALYKNLLHSKESSCSDSTNEYM 1021
            GGP +VI EYC YG+L N+L+ KR  F  +K     +AAL+      K            
Sbjct: 910  GGPLMVIVEYCKYGNLSNYLKSKRALFFINK-----DAALHVEPKKEKMEP--------- 955

Query: 1022 DMKPGVSYVVPTKADKRRSARIGSYIERDVTPA-----IMXXXXXXXXXXXXXSFSYQVA 1186
            D +PG    + +       A  G   ++ ++ A                    S+S+QVA
Sbjct: 956  DPEPGKKQRLDSVTSSESFASSGFQEDKSLSDAEEEEDSDDFYKQPITMEDLISYSFQVA 1015

Query: 1187 KGMAFLASK-----------------------------------------NARLPVKWMA 1243
            +GM FL+S+                                         + RLP+KWMA
Sbjct: 1016 RGMEFLSSRKCIHRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRKGDTRLPLKWMA 1075

Query: 1244 PESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPV 1423
            PESIF+ +Y+ +SDVWSYG+ LWE+FSLG SPYPG+ +D  F   +KEG RM +PE+A  
Sbjct: 1076 PESIFDKIYSTKSDVWSYGVLLWEIFSLGGSPYPGVQMDEDFCSRLKEGVRMRAPEYATP 1135

Query: 1424 EMYDIMKTCWDADPLKRPTFKQIVQLIEK 1510
            E+Y IM  CW  DP +RP F   V+L+EK
Sbjct: 1136 EIYQIMLDCWHKDPKERPRF---VELVEK 1161


>ref|XP_003129035.2| PREDICTED: vascular endothelial growth factor receptor 2 [Sus
            scrofa].
          Length = 1347

 Score =  252 bits (644), Expect = 6e-67
 Identities = 169/520 (32%), Positives = 255/520 (49%), Gaps = 68/520 (13%)
 Frame = +2

Query: 143  LQCVAAGFPEPTIDWYFCPGTEQRCSVPVGPVDVQIQNSSVSPFGKLVIHSSIDYSAFKH 322
            + C A+G P P I W+     +    V    + ++  N +++          I     + 
Sbjct: 677  VSCTASGNPSPQITWF----KDNETLVEDSGIVLKDGNRNLT----------IRRVRKED 722

Query: 323  NGTVECRAYNDVGKSSAFFNFAFKEQIHAHTLFTPLLIGFVIAAGMMCIIVMILTYKYLQ 502
             G   C+A + +G +     F  +       L   +L+G  + A    ++++I+      
Sbjct: 723  EGLYTCQACSVLGCAKVEAFFIVEGAQEKTNLEVIILVGTAVIAMFFWLLLVIVL----- 777

Query: 503  KPMYEVQWKVVEEINGNNY------VYIDPTQLPYDH----------KWEFPRNRLSFGK 634
                    + V+  NG         + +DP +LP D           KWEFPR+RL  GK
Sbjct: 778  --------RTVKRANGGELKTGYLSIVMDPDELPLDEHCERLPYDASKWEFPRDRLKLGK 829

Query: 635  TLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNI 814
             LG GAFG+V+EA A+G+ K+    TVAVKMLK  A  +E  ALMSELK+L ++G+H+N+
Sbjct: 830  PLGRGAFGQVIEADAFGIDKTATCKTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNV 889

Query: 815  VNLLGACT-IGGPTLVITEYCCYGDLLNFLRRKRDSFICSK---------QEDHAEAAL- 961
            VNLLGACT  GGP +VI E+C +G+L  +LR KR+ F+  K         +E   E  + 
Sbjct: 890  VNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKEYVGEITVD 949

Query: 962  YKNLLHSKESSCSDSTNEYMDMKPGVSYVVPTKADKRRSARIGSYIERDVTPAIMXXXXX 1141
             K  L S  SS S +++ +++ K                  +    E +V+  +      
Sbjct: 950  PKRRLDSITSSQSSASSGFVEEK-----------------SLSDVEEEEVSEDL---YKN 989

Query: 1142 XXXXXXXXSFSYQVAKGMAFLASK------------------------------------ 1213
                     +S+QVAKGM FLAS+                                    
Sbjct: 990  FLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPD 1049

Query: 1214 -----NARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKM 1378
                 +ARLP+KWMAPE+IF+ VYT +SDVWS+G+ LWE+FSLG+SPYPG+ +D +F + 
Sbjct: 1050 YVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRR 1109

Query: 1379 IKEGFRMLSPEHAPVEMYDIMKTCWDADPLKRPTFKQIVQ 1498
            +KEG RM +P++   EMY  M  CW  +P +RPTF ++V+
Sbjct: 1110 LKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVE 1149


>ref|XP_003123684.1| PREDICTED: vascular endothelial growth factor receptor 3-like [Sus
            scrofa].
          Length = 1389

 Score =  252 bits (643), Expect = 7e-67
 Identities = 164/506 (32%), Positives = 262/506 (51%), Gaps = 52/506 (10%)
 Frame = +2

Query: 143  LQCVAAGFPEPTIDWYFCPGTEQRCSVPVGPVDVQIQNSSVSPFGKLVIHSSIDYSAFKH 322
            ++C  AG   P+I WY     ++R       +D+   N       KL I    +  A   
Sbjct: 723  MRCPVAGAHVPSIVWY----KDERLLAEESGIDLTDSNQ------KLSIRRVREEDA--- 769

Query: 323  NGTVECRAYNDVGKSSAFFNFAFKEQIHAHTLFTPLLIGFVIAAGMMCIIVMILTYKYLQ 502
             G   C   N  G  ++  + A +      ++   +L+G  + A    ++++++ +  ++
Sbjct: 770  -GRYLCSVCNAKGCVNSSASVAVEGSEDKGSMEIVILVGTGVIAVFFWVLLLLI-FCNMR 827

Query: 503  KPMYEVQWKVVEEINGNNYVYIDPTQLPYDHK----------WEFPRNRLSFGKTLGAGA 652
            +P +       +   G   + +DP ++P + +          WEFPR RL  G+ LG GA
Sbjct: 828  RPTH------ADIKTGYLSIIMDPGEVPLEEQCEYLSYDASQWEFPRERLHLGRVLGHGA 881

Query: 653  FGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGA 832
            FGKVVEA+A+G+ K  +  TVAVKMLK  A  +E  ALMSELK+L ++GNH+N+VNLLGA
Sbjct: 882  FGKVVEASAFGINKGSSCDTVAVKMLKEGATASEHRALMSELKILIHIGNHLNVVNLLGA 941

Query: 833  CT-IGGPTLVITEYCCYGDLLNFLRRKRDSFICSKQEDHAEAALYKNLLHSKESSCSDST 1009
            CT   GP +VI E+C YG+L NFLR KR++F    ++   +   +++++   ES+ +D  
Sbjct: 942  CTKPNGPLMVIVEFCKYGNLSNFLRAKREAFNPYAEKTLEQRRRFRSMV---ESAKADRR 998

Query: 1010 NEYMDMKPGVSYVVPTKADKRRSARIGSYIERDVTPAIMXXXXXXXXXXXXXSFSYQVAK 1189
                  +  ++ ++  K    R+  +    +  ++P  M              +S+QVA+
Sbjct: 999  RPGTSDRALLTKLLTGKGGAGRAPLVQEAEDLWLSPLTM---------EDLVCYSFQVAR 1049

Query: 1190 GMAFLASK-----------------------------------------NARLPVKWMAP 1246
            GM FLAS+                                         +ARLP+KWMAP
Sbjct: 1050 GMEFLASRKCIHRDLAARNILLSESDVVKICDFGLARDIYKDPDYVRKGSARLPLKWMAP 1109

Query: 1247 ESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPVE 1426
            ESIF+ VYT +SDVWS+G+ LWE+FSLG+SPYPG+ ++ +F + +KEG RM +PE A   
Sbjct: 1110 ESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINEEFCQRLKEGTRMRAPELATPA 1169

Query: 1427 MYDIMKTCWDADPLKRPTFKQIVQLI 1504
            +  IM +CW  +P +RP F  +V+++
Sbjct: 1170 IRRIMLSCWAGEPKERPAFSDLVEIL 1195


>ref|NP_001093394.1| fibroblast growth factor receptor 2 [Sus scrofa].
          Length = 822

 Score =  228 bits (580), Expect = 1e-59
 Identities = 125/327 (38%), Positives = 189/327 (57%), Gaps = 2/327 (0%)
 Frame = +2

Query: 578  QLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDA--AMTVAVKMLKPSAHLT 751
            +LP D KWEFPR++L+ GK LG G FG+VV A A G+ K     A+TVAVKMLK  A   
Sbjct: 468  ELPEDPKWEFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKEKPKEAVTVAVKMLKDDATEK 527

Query: 752  EREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICS 931
            +   L+SE++++  +G H NI+NLLGACT  GP  VI EY   G+L  +LR +R   +  
Sbjct: 528  DLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGM-- 585

Query: 932  KQEDHAEAALYKNLLHSKESSCSDSTNEYMDMKPGVSYVVPTKADKRRSARIGSYIERDV 1111
                  E +   N +  ++ +  D  +    +  G+ Y+   K            I RD+
Sbjct: 586  ------EYSYDVNRVPEEQMTFKDLVSCTYQLARGMEYLASQKC-----------IHRDL 628

Query: 1112 TPAIMXXXXXXXXXXXXXSFSYQVAKGMAFLASKNARLPVKWMAPESIFNCVYTFESDVW 1291
                +               +  +     +  + N RLPVKWMAPE++F+ VYT +SDVW
Sbjct: 629  AARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVW 688

Query: 1292 SYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPVEMYDIMKTCWDADPLK 1471
            S+G+ +WE+F+LG SPYPG+PV+ + +K++KEG RM  P +   E+Y +M+ CW A P +
Sbjct: 689  SFGVLMWEIFTLGGSPYPGIPVE-ELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQ 747

Query: 1472 RPTFKQIVQLIEKQISESTNHIYSNLA 1552
            RPTFKQ+V+ +++ ++ +TN  Y +L+
Sbjct: 748  RPTFKQLVEDLDRILTLTTNEDYLDLS 774


>ref|XP_003356969.1| PREDICTED: alpha-type platelet-derived growth factor receptor-like,
            partial [Sus scrofa].
          Length = 451

 Score =  220 bits (561), Expect = 2e-57
 Identities = 136/339 (40%), Positives = 181/339 (53%), Gaps = 63/339 (18%)
 Frame = +2

Query: 758  EALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKQ 937
            +ALMSELK++++LG H+NIVNLLGACT  GP  +ITEYC YGDL+N+L + RDSF+    
Sbjct: 1    QALMSELKIMTHLGPHLNIVNLLGACTKSGPIYIITEYCFYGDLVNYLHKNRDSFLSRHP 60

Query: 938  EDHAEAALYKNLLHSKESSCS------DSTNEYMDMKPG--VSYV-------VPTKADKR 1072
            E   +      L  + ES+ S      ++  +YMDMK      YV       V   +D +
Sbjct: 61   EKPKKELDIFGLNPADESTRSYVILSFENNGDYMDMKQADTTQYVPMLERKEVSKYSDIQ 120

Query: 1073 RSA--RIGSY-----IERDVTPAIMXXXXXXXXXXXXXSFSYQVAKGMAFLASKN----- 1216
            RS   R  SY     ++ +V   +              SF+YQVA+GM FLASKN     
Sbjct: 121  RSLYDRPASYKKKSMLDSEVKNLLSDDNSDGLTLLDLLSFTYQVARGMEFLASKNCVHRD 180

Query: 1217 ---------------------AR---------------LPVKWMAPESIFNCVYTFESDV 1288
                                 AR               LPVKWMAPESIF+ +YT  SDV
Sbjct: 181  LAARNVLLAQGKIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDV 240

Query: 1289 WSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPVEMYDIMKTCWDADPL 1468
            WSYGI LWE+FSLG +PYPGM VDS FY  IK G+RM  P+HA  E+Y+IM  CW+++P 
Sbjct: 241  WSYGILLWEIFSLGGTPYPGMMVDSTFYNKIKSGYRMAKPDHATSEVYEIMVKCWNSEPE 300

Query: 1469 KRPTFKQIVQLIEKQISESTNHIYSNLANCSPHRENPAV 1585
            KRP+F  + +++E  +       Y  +       ++PAV
Sbjct: 301  KRPSFYHLSEIVENLLPGQYKKSYEKIHLDFLKSDHPAV 339


>ref|XP_003123731.1| PREDICTED: fibroblast growth factor receptor 4 isoform 2 [Sus
            scrofa].
          Length = 760

 Score =  219 bits (558), Expect = 5e-57
 Identities = 138/366 (37%), Positives = 194/366 (53%), Gaps = 8/366 (2%)
 Frame = +2

Query: 581  LPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGL--IKSDAAMTVAVKMLKPSAHLTE 754
            LP D  WEFPR+RL  GK LG G FG+VV A A+G+   + D A TVAVKMLK +A   +
Sbjct: 414  LPLDPLWEFPRDRLVLGKPLGEGCFGQVVCAEAFGMDPTRPDQASTVAVKMLKDNASDKD 473

Query: 755  REALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSF--IC 928
               L+SE++V+  +G H NI+NLLG CT  GP  VI E    G+L  FLR +R     + 
Sbjct: 474  LADLVSEMEVMKLIGRHKNIINLLGVCTQEGPLYVIVECAAKGNLREFLRARRPPGPDLS 533

Query: 929  SKQEDHAEAALYKNLLHSKESSCSDSTNEYMDMKPGVSYVVPTKADKRRSARIGSYIERD 1108
                  +E  L    L     SC+        +  G+ Y+   K   R  A     +  D
Sbjct: 534  PDGPRSSEGPLSFPAL----VSCA------YQVARGMQYLESQKCIHRDLAARNVLVTED 583

Query: 1109 VTPAIMXXXXXXXXXXXXXSFSYQVAKGMAFL----ASKNARLPVKWMAPESIFNCVYTF 1276
                I                 + +A+G+  +     + N RLPVKWMAPE++F+ VYT 
Sbjct: 584  NVMKIA---------------DFGLARGIHHIDYYKKTSNGRLPVKWMAPEALFDRVYTH 628

Query: 1277 ESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPVEMYDIMKTCWD 1456
            +SDVWS+GI LWE+F+LG SPYPG+PV+ + + +++EG RM  P H P E+Y +M+ CW 
Sbjct: 629  QSDVWSFGILLWEIFTLGGSPYPGIPVE-ELFSLLREGHRMDRPPHCPPELYGLMRECWH 687

Query: 1457 ADPLKRPTFKQIVQLIEKQISESTNHIYSNLANCSPHRENPAVDHSVRINSVGSSASSTQ 1636
            A P +RPTFKQ+V+ ++K +   +           P+  +PA           SS SS+ 
Sbjct: 688  AAPSQRPTFKQLVEALDKVLLAVSEEYLDLRLTFGPY--SPAG------GDASSSCSSSD 739

Query: 1637 PLLVHE 1654
             +  HE
Sbjct: 740  SVFSHE 745


  Database: RefSeq49_SP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 11,343,932
  Number of sequences in database:  24,897
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 24897
Number of Hits to DB: 58,858,779
Number of extensions: 1586341
Number of successful extensions: 6202
Number of sequences better than 1.0e-05: 111
Number of HSP's gapped: 5968
Number of HSP's successfully gapped: 160
Length of query: 788
Length of database: 11,343,932
Length adjustment: 107
Effective length of query: 681
Effective length of database: 8,679,953
Effective search space: 5911047993
Effective search space used: 5911047993
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)

Search to RefSeqMP_Rel49

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-012635
         (2366 letters)

Database: RefSeq49_MP.fasta 
           30,036 sequences; 15,617,559 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_066922.2| mast/stem cell growth factor receptor isoform 2...   979   0.0  
Alignment   gi|NP_001116205.1| mast/stem cell growth factor receptor isofor...   973   0.0  
Alignment   gi|NP_001032948.2| macrophage colony-stimulating factor 1 recep...   455   e-128
Alignment   gi|NP_001076785.1| alpha-type platelet-derived growth factor re...   363   e-100
Alignment   gi|NP_035188.2| alpha-type platelet-derived growth factor recep...   363   e-100
Alignment   gi|NP_001139740.1| beta-type platelet-derived growth factor rec...   345   1e-94
Alignment   gi|NP_032835.2| beta-type platelet-derived growth factor recept...   340   3e-93
Alignment   gi|NP_034359.2| FL cytokine receptor [Mus musculus].                 330   4e-90
Alignment   gi|NP_034337.2| fibroblast growth factor receptor 2 isoform III...   227   4e-59
Alignment   gi|NP_963895.2| fibroblast growth factor receptor 2 isoform III...   227   4e-59

>ref|NP_066922.2| mast/stem cell growth factor receptor isoform 2 [Mus musculus].
          Length = 975

 Score =  979 bits (2530), Expect = 0.0
 Identities = 490/594 (82%), Positives = 513/594 (86%), Gaps = 42/594 (7%)
 Frame = +2

Query: 2    LTRLKGTEGGTYTFLVSNADVNSSVTLNVYVNTKPEILTHDRLMNGMLQCVAAGFPEPTI 181
            LTRLKGTEGGTYTFLVSN+D ++SVT NVYVNTKPEILT+DRL+NGMLQCVA GFPEPTI
Sbjct: 382  LTRLKGTEGGTYTFLVSNSDASASVTFNVYVNTKPEILTYDRLINGMLQCVAEGFPEPTI 441

Query: 182  DWYFCPGTEQRCSVPVGPVDVQIQNSSVSPFGKLVIHSSIDYSAFKHNGTVECRAYNDVG 361
            DWYFC G EQRC+ PV PVDVQ+QN SVSPFGKLV+ SSID S F+HNGTVEC+A NDVG
Sbjct: 442  DWYFCTGAEQRCTTPVSPVDVQVQNVSVSPFGKLVVQSSIDSSVFRHNGTVECKASNDVG 501

Query: 362  KSSAFFNFAFKEQIHAHTLFTPLLIGFVIAAGMMCIIVMILTYKYLQKPMYEVQWKVVEE 541
            KSSAFFNFAFKEQI AHTLFTPLLIGFV+AAG M IIVM+LTYKYLQKPMYEVQWKVVEE
Sbjct: 502  KSSAFFNFAFKEQIQAHTLFTPLLIGFVVAAGAMGIIVMVLTYKYLQKPMYEVQWKVVEE 561

Query: 542  INGNNYVYIDPTQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAV 721
            INGNNYVYIDPTQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAV
Sbjct: 562  INGNNYVYIDPTQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAV 621

Query: 722  KMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFL 901
            KMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACT+GGPTLVITEYCCYGDLLNFL
Sbjct: 622  KMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTVGGPTLVITEYCCYGDLLNFL 681

Query: 902  RRKRDSFICSKQEDHAEAALYKNLLHSKESSCSDSTNEYMDMKPGVSYVVPTKADKRRSA 1081
            RRKRDSFI SKQE+ AEAALYKNLLHS E SC DS+NEYMDMKPGVSYVVPTK DKRRSA
Sbjct: 682  RRKRDSFIFSKQEEQAEAALYKNLLHSTEPSC-DSSNEYMDMKPGVSYVVPTKTDKRRSA 740

Query: 1082 RIGSYIERDVTPAIMXXXXXXXXXXXXXSFSYQVAKGMAFLASK---------------- 1213
            RI SYIERDVTPAIM             SFSYQVAKGMAFLASK                
Sbjct: 741  RIDSYIERDVTPAIMEDDELALDLDDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTH 800

Query: 1214 -------------------------NARLPVKWMAPESIFNCVYTFESDVWSYGIFLWEL 1318
                                     NARLPVKWMAPESIF+CVYTFESDVWSYGIFLWEL
Sbjct: 801  GRITKICDFGLARDIRNDSNYVVKGNARLPVKWMAPESIFSCVYTFESDVWSYGIFLWEL 860

Query: 1319 FSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPVEMYDIMKTCWDADPLKRPTFKQIVQ 1498
            FSLGSSPYPGMPVDSKFYKMIKEGFRM+SPEHAP EMYD+MKTCWDADPLKRPTFKQ+VQ
Sbjct: 861  FSLGSSPYPGMPVDSKFYKMIKEGFRMVSPEHAPAEMYDVMKTCWDADPLKRPTFKQVVQ 920

Query: 1499 LIEKQISESTNHIYSNLANCSPHRENP-AVDHSVRINSVGSSASSTQPLLVHED 1657
            LIEKQIS+ST HIYSNLANC+P+ ENP  VDHSVR+NSVGSSASSTQPLLVHED
Sbjct: 921  LIEKQISDSTKHIYSNLANCNPNPENPVVVDHSVRVNSVGSSASSTQPLLVHED 974


>ref|NP_001116205.1| mast/stem cell growth factor receptor isoform 1 [Mus musculus].
          Length = 979

 Score =  973 bits (2515), Expect = 0.0
 Identities = 490/598 (81%), Positives = 513/598 (85%), Gaps = 46/598 (7%)
 Frame = +2

Query: 2    LTRLKGTEGGTYTFLVSNADVNSSVTLNVYVNTKPEILTHDRLMNGMLQCVAAGFPEPTI 181
            LTRLKGTEGGTYTFLVSN+D ++SVT NVYVNTKPEILT+DRL+NGMLQCVA GFPEPTI
Sbjct: 382  LTRLKGTEGGTYTFLVSNSDASASVTFNVYVNTKPEILTYDRLINGMLQCVAEGFPEPTI 441

Query: 182  DWYFCPGTEQRCSVPVGPVDVQIQNSSVSPFGKLVIHSSIDYSAFKHNGTVECRAYNDVG 361
            DWYFC G EQRC+ PV PVDVQ+QN SVSPFGKLV+ SSID S F+HNGTVEC+A NDVG
Sbjct: 442  DWYFCTGAEQRCTTPVSPVDVQVQNVSVSPFGKLVVQSSIDSSVFRHNGTVECKASNDVG 501

Query: 362  KSSAFFNFAFK----EQIHAHTLFTPLLIGFVIAAGMMCIIVMILTYKYLQKPMYEVQWK 529
            KSSAFFNFAFK    EQI AHTLFTPLLIGFV+AAG M IIVM+LTYKYLQKPMYEVQWK
Sbjct: 502  KSSAFFNFAFKGNNKEQIQAHTLFTPLLIGFVVAAGAMGIIVMVLTYKYLQKPMYEVQWK 561

Query: 530  VVEEINGNNYVYIDPTQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAM 709
            VVEEINGNNYVYIDPTQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAM
Sbjct: 562  VVEEINGNNYVYIDPTQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAM 621

Query: 710  TVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDL 889
            TVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACT+GGPTLVITEYCCYGDL
Sbjct: 622  TVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTVGGPTLVITEYCCYGDL 681

Query: 890  LNFLRRKRDSFICSKQEDHAEAALYKNLLHSKESSCSDSTNEYMDMKPGVSYVVPTKADK 1069
            LNFLRRKRDSFI SKQE+ AEAALYKNLLHS E SC DS+NEYMDMKPGVSYVVPTK DK
Sbjct: 682  LNFLRRKRDSFIFSKQEEQAEAALYKNLLHSTEPSC-DSSNEYMDMKPGVSYVVPTKTDK 740

Query: 1070 RRSARIGSYIERDVTPAIMXXXXXXXXXXXXXSFSYQVAKGMAFLASK------------ 1213
            RRSARI SYIERDVTPAIM             SFSYQVAKGMAFLASK            
Sbjct: 741  RRSARIDSYIERDVTPAIMEDDELALDLDDLLSFSYQVAKGMAFLASKNCIHRDLAARNI 800

Query: 1214 -----------------------------NARLPVKWMAPESIFNCVYTFESDVWSYGIF 1306
                                         NARLPVKWMAPESIF+CVYTFESDVWSYGIF
Sbjct: 801  LLTHGRITKICDFGLARDIRNDSNYVVKGNARLPVKWMAPESIFSCVYTFESDVWSYGIF 860

Query: 1307 LWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPVEMYDIMKTCWDADPLKRPTFK 1486
            LWELFSLGSSPYPGMPVDSKFYKMIKEGFRM+SPEHAP EMYD+MKTCWDADPLKRPTFK
Sbjct: 861  LWELFSLGSSPYPGMPVDSKFYKMIKEGFRMVSPEHAPAEMYDVMKTCWDADPLKRPTFK 920

Query: 1487 QIVQLIEKQISESTNHIYSNLANCSPHRENP-AVDHSVRINSVGSSASSTQPLLVHED 1657
            Q+VQLIEKQIS+ST HIYSNLANC+P+ ENP  VDHSVR+NSVGSSASSTQPLLVHED
Sbjct: 921  QVVQLIEKQISDSTKHIYSNLANCNPNPENPVVVDHSVRVNSVGSSASSTQPLLVHED 978


>ref|NP_001032948.2| macrophage colony-stimulating factor 1 receptor precursor [Mus
            musculus].
          Length = 977

 Score =  455 bits (1170), Expect = e-128
 Identities = 250/578 (43%), Positives = 344/578 (59%), Gaps = 62/578 (10%)
 Frame = +2

Query: 2    LTRLKGTEGGTYTFLVSNADVNSSVTLNVYVNTKPEILTHDRLMNG--MLQCVAAGFPEP 175
            L R+K +E G Y  +  N    +++T  + +   PE+      +NG  +L C  +G+P+P
Sbjct: 366  LNRVKASEAGQYFLMAQNKAGWNNLTFELTLRYPPEVSVTWMPVNGSDVLFCDVSGYPQP 425

Query: 176  TIDWYFCPGTEQRCSVPVGPVDVQIQNS------SVSPFGKLVIHSSIDYSAFKHNGTVE 337
            ++ W  C G   RC        +Q+ N       S  PF K++I S +     KHN T  
Sbjct: 426  SVTWMECRGHTDRCDEAQA---LQVWNDTHPEVLSQKPFDKVIIQSQLPIGTLKHNMTYF 482

Query: 338  CRAYNDVGKSSAFF---NFAFKEQIHAHTLFTPLLIGFVIAAGMMCIIVMILTYKYLQKP 508
            C+ +N VG SS +F   +    +Q+   +LFTP+++  +    ++ +++++L YKY QKP
Sbjct: 483  CKTHNSVGNSSQYFRAVSLGQSKQLPDESLFTPVVVACMSVMSLLVLLLLLLLYKYKQKP 542

Query: 509  MYEVQWKVVEEINGNNYVYIDPTQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGL 688
             Y+V+WK++E   GN+Y +IDPTQLPY+ KWEFPRN L FGKTLGAGAFGKVVEATA+GL
Sbjct: 543  KYQVRWKIIERYEGNSYTFIDPTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGL 602

Query: 689  IKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITE 868
             K DA + VAVKMLK +AH  E+EALMSELK++S+LG H NIVNLLGACT GGP LVITE
Sbjct: 603  GKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITE 662

Query: 869  YCCYGDLLNFLRRKRDSFI---CSKQEDHAEAALYKNLLHSKESSCSDS------TNEYM 1021
            YCCYGDLLNFLRRK ++ +    S  +D    + YKN+   K+    DS       + Y+
Sbjct: 663  YCCYGDLLNFLRRKAEAMLGPSLSPGQDSEGDSSYKNIHLEKKYVRRDSGFSSQGVDTYV 722

Query: 1022 DMKPGVSYVVPTKADKRRSARIGSYIERDVTPAIMXXXXXXXXXXXXXSFSYQVAKGMAF 1201
            +M+P    V  + +D        S+ ++D+                   FS QVA+GMAF
Sbjct: 723  EMRP----VSTSSSD--------SFFKQDLD----KEASRPLELWDLLHFSSQVAQGMAF 766

Query: 1202 LASK-----------------------------------------NARLPVKWMAPESIF 1258
            LASK                                         NARLPVKWMAPESIF
Sbjct: 767  LASKNCIHRDVAARNVLLTSGHVAKIGDFGLARDIMNDSNYVVKGNARLPVKWMAPESIF 826

Query: 1259 NCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPVEMYDI 1438
            +CVYT +SDVWSYGI LWE+FSLG +PYPG+ V++KFYK++K+G++M  P  AP  +Y I
Sbjct: 827  DCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNNKFYKLVKDGYQMAQPVFAPKNIYSI 886

Query: 1439 MKTCWDADPLKRPTFKQIVQLIEKQIS-ESTNHIYSNL 1549
            M++CWD +P +RPTF+QI  L+++Q   E  +  Y+NL
Sbjct: 887  MQSCWDLEPTRRPTFQQICFLLQEQARLERRDQDYANL 924


>ref|NP_001076785.1| alpha-type platelet-derived growth factor receptor precursor [Mus
            musculus].
          Length = 1089

 Score =  363 bits (931), Expect = e-100
 Identities = 228/603 (37%), Positives = 319/603 (52%), Gaps = 75/603 (12%)
 Frame = +2

Query: 2    LTRLKGTEGGTYTFLVSNADVNSSVTLNVYVNTKPEILT-----HDRLMNGMLQCVAAGF 166
            L R K  + G YT +V N D   S T  +       IL      H       ++C A G 
Sbjct: 381  LIRAKEEDSGHYTIIVQNEDDVKSYTFELSTLVPASILDLVDDHHGSGGGQTVRCTAEGT 440

Query: 167  PEPTIDWYFCPGTEQ---RCSVPVGPVDVQIQNSSVSPFGKLVIHSSIDYSAFKHNGTVE 337
            P P IDW  C   ++     S  V   +V    + +   G+  +   + ++  +    V 
Sbjct: 441  PLPEIDWMICKHIKKCNNDTSWTVLASNVSNIITELPRRGRSTVEGRVSFAKVEETIAVR 500

Query: 338  CRAYNDVGKSSAFFNFAFKEQIHAHTLFTPLLIGFVIAAGMMCIIV--MILTYKYLQKPM 511
            C A N++         A + ++ A TL + L +   +   ++ +IV  ++L   + QKP 
Sbjct: 501  CLAKNNLSV------VARELKLVAPTLRSELTVAAAVLVLLVIVIVSLIVLVVIWKQKPR 554

Query: 512  YEVQWKVVEEIN--GNNYVYIDPTQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYG 685
            YE++W+V+E I+  G+ Y+Y+DP QLPYD +WEFPR+ L  G+ LG+GAFGKVVE TAYG
Sbjct: 555  YEIRWRVIESISPDGHEYIYVDPMQLPYDSRWEFPRDGLVLGRILGSGAFGKVVEGTAYG 614

Query: 686  LIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVIT 865
            L +S   M VAVKMLKP+A  +E++ALMSELK++++LG H+NIVNLLGACT  GP  +IT
Sbjct: 615  LSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGACTKSGPIYIIT 674

Query: 866  EYCCYGDLLNFLRRKRDSFICSKQEDHAEAALYKNLLHSKESSCS------DSTNEYMDM 1027
            EYC YGDL+N+L + RDSF+    E   +      L  + ES+ S      ++  +YMDM
Sbjct: 675  EYCFYGDLVNYLHKNRDSFMSQHPEKPKKDLDIFGLNPADESTRSYVILSFENNGDYMDM 734

Query: 1028 KPG--VSYV-------VPTKADKRRSA--RIGSY-----IERDVTPAIMXXXXXXXXXXX 1159
            K      YV       V   +D +RS   R  SY     ++ +V   +            
Sbjct: 735  KQADTTQYVPMLERKEVSKYSDIQRSLYDRPASYKKKSMLDSEVKNLLSDDDSEGLTLLD 794

Query: 1160 XXSFSYQVAKGMAFLASKN-------AR-------------------------------- 1222
              SF+YQVA+GM FLASKN       AR                                
Sbjct: 795  LLSFTYQVARGMEFLASKNCVHRDLAARNVLLAQGKIVKICDFGLARDIMHDSNYVSKGS 854

Query: 1223 --LPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFR 1396
              LPVKWMAPESIF+ +YT  SDVWSYGI LWE+FSLG +PYPGM VDS FY  IK G+R
Sbjct: 855  TFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMMVDSTFYNKIKSGYR 914

Query: 1397 MLSPEHAPVEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISESTNHIYSNLANCSPHREN 1576
            M  P+HA  E+Y+IM  CW+++P KRP+F  + +++E  +       Y  +       ++
Sbjct: 915  MAKPDHATSEVYEIMVQCWNSEPEKRPSFYHLSEIVENLLPGQYKKSYEKIHLDFLKSDH 974

Query: 1577 PAV 1585
            PAV
Sbjct: 975  PAV 977


>ref|NP_035188.2| alpha-type platelet-derived growth factor receptor precursor [Mus
            musculus].
          Length = 1089

 Score =  363 bits (931), Expect = e-100
 Identities = 228/603 (37%), Positives = 319/603 (52%), Gaps = 75/603 (12%)
 Frame = +2

Query: 2    LTRLKGTEGGTYTFLVSNADVNSSVTLNVYVNTKPEILT-----HDRLMNGMLQCVAAGF 166
            L R K  + G YT +V N D   S T  +       IL      H       ++C A G 
Sbjct: 381  LIRAKEEDSGHYTIIVQNEDDVKSYTFELSTLVPASILDLVDDHHGSGGGQTVRCTAEGT 440

Query: 167  PEPTIDWYFCPGTEQ---RCSVPVGPVDVQIQNSSVSPFGKLVIHSSIDYSAFKHNGTVE 337
            P P IDW  C   ++     S  V   +V    + +   G+  +   + ++  +    V 
Sbjct: 441  PLPEIDWMICKHIKKCNNDTSWTVLASNVSNIITELPRRGRSTVEGRVSFAKVEETIAVR 500

Query: 338  CRAYNDVGKSSAFFNFAFKEQIHAHTLFTPLLIGFVIAAGMMCIIV--MILTYKYLQKPM 511
            C A N++         A + ++ A TL + L +   +   ++ +IV  ++L   + QKP 
Sbjct: 501  CLAKNNLSV------VARELKLVAPTLRSELTVAAAVLVLLVIVIVSLIVLVVIWKQKPR 554

Query: 512  YEVQWKVVEEIN--GNNYVYIDPTQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYG 685
            YE++W+V+E I+  G+ Y+Y+DP QLPYD +WEFPR+ L  G+ LG+GAFGKVVE TAYG
Sbjct: 555  YEIRWRVIESISPDGHEYIYVDPMQLPYDSRWEFPRDGLVLGRILGSGAFGKVVEGTAYG 614

Query: 686  LIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVIT 865
            L +S   M VAVKMLKP+A  +E++ALMSELK++++LG H+NIVNLLGACT  GP  +IT
Sbjct: 615  LSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGACTKSGPIYIIT 674

Query: 866  EYCCYGDLLNFLRRKRDSFICSKQEDHAEAALYKNLLHSKESSCS------DSTNEYMDM 1027
            EYC YGDL+N+L + RDSF+    E   +      L  + ES+ S      ++  +YMDM
Sbjct: 675  EYCFYGDLVNYLHKNRDSFMSQHPEKPKKDLDIFGLNPADESTRSYVILSFENNGDYMDM 734

Query: 1028 KPG--VSYV-------VPTKADKRRSA--RIGSY-----IERDVTPAIMXXXXXXXXXXX 1159
            K      YV       V   +D +RS   R  SY     ++ +V   +            
Sbjct: 735  KQADTTQYVPMLERKEVSKYSDIQRSLYDRPASYKKKSMLDSEVKNLLSDDDSEGLTLLD 794

Query: 1160 XXSFSYQVAKGMAFLASKN-------AR-------------------------------- 1222
              SF+YQVA+GM FLASKN       AR                                
Sbjct: 795  LLSFTYQVARGMEFLASKNCVHRDLAARNVLLAQGKIVKICDFGLARDIMHDSNYVSKGS 854

Query: 1223 --LPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFR 1396
              LPVKWMAPESIF+ +YT  SDVWSYGI LWE+FSLG +PYPGM VDS FY  IK G+R
Sbjct: 855  TFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMMVDSTFYNKIKSGYR 914

Query: 1397 MLSPEHAPVEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISESTNHIYSNLANCSPHREN 1576
            M  P+HA  E+Y+IM  CW+++P KRP+F  + +++E  +       Y  +       ++
Sbjct: 915  MAKPDHATSEVYEIMVQCWNSEPEKRPSFYHLSEIVENLLPGQYKKSYEKIHLDFLKSDH 974

Query: 1577 PAV 1585
            PAV
Sbjct: 975  PAV 977


>ref|NP_001139740.1| beta-type platelet-derived growth factor receptor isoform 1 [Mus
            musculus].
          Length = 1099

 Score =  345 bits (884), Expect = 1e-94
 Identities = 219/611 (35%), Positives = 313/611 (51%), Gaps = 83/611 (13%)
 Frame = +2

Query: 2    LTRLKGTEGGTYTFLVSNADVNSSVTLNVYVNTKPEIL----THDRLMNGMLQCVAAGFP 169
            L R+K +E G YT    + D    ++  + VN    +L    +H       ++C   G P
Sbjct: 382  LVRVKVSEAGYYTMRAFHEDDEVQLSFKLQVNVPVRVLELSESHPANGEQTIRCRGRGMP 441

Query: 170  EPTIDWYFCPGTEQRCSVPVGPVDVQIQNSSVSPFGKLV----------IHSSIDYSAFK 319
            +P + W  C   + RC   + P  +   +   S     V          + S++      
Sbjct: 442  QPNVTWSTCRDLKSRCPRKLSPTPLGNSSKEESQLETNVTFWEEDQEYEVVSTLRLRHVD 501

Query: 320  HNGTVECRAYNDVGKSSAFFNFAFKEQIHAHTL-FTPLLIGFVIAAGMMCII-VMILTYK 493
               +V C   N +G  S       +  +  H+L F  ++I  ++A  ++ +I ++IL   
Sbjct: 502  QPLSVRCMLQNSMGGDSQ------EVTVVPHSLPFKVVVISAILALVVLTVISLIILIML 555

Query: 494  YLQKPMYEVQWKVVEEIN--GNNYVYIDPTQLPYDHKWEFPRNRLSFGKTLGAGAFGKVV 667
            + +KP YE++WKV+E ++  G+ Y+Y+DP QLPYD  WE PR++L  G+TLG+GAFG+VV
Sbjct: 556  WQKKPRYEIRWKVIESVSSDGHEYIYVDPVQLPYDSTWELPRDQLVLGRTLGSGAFGQVV 615

Query: 668  EATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGG 847
            EATA+GL  S A M VAVKMLK +A  +E++ALMSELK++S+LG H+N+VNLLGACT GG
Sbjct: 616  EATAHGLSHSQATMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNVVNLLGACTKGG 675

Query: 848  PTLVITEYCCYGDLLNFLRRKRDSFICSKQEDHA--EAALYKNL------LHSKESSCSD 1003
            P  +ITEYC YGDL+++L R + +F+      H    A LY N       L S  +   +
Sbjct: 676  PIYIITEYCRYGDLVDYLHRNKHTFLQRHSNKHCPPSAELYSNALPVGFSLPSHLNLTGE 735

Query: 1004 STNEYMDMK--PGVSYV--VPTKAD-KRRSARIGSYI-----------ERDVTPAIMXXX 1135
            S   YMDM     + YV  +  K D K       SY+           ER    A +   
Sbjct: 736  SDGGYMDMSKDESIDYVPMLDMKGDIKYADIESPSYMAPYDNYVPSAPERTYR-ATLIND 794

Query: 1136 XXXXXXXXXXSFSYQVAKGMAFLASKN-------AR------------------------ 1222
                       FSYQVA GM FLASKN       AR                        
Sbjct: 795  SPVLSYTDLVGFSYQVANGMDFLASKNCVHRDLAARNVLICEGKLVKICDFGLARDIMRD 854

Query: 1223 ----------LPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFY 1372
                      LP+KWMAPESIFN +YT  SDVWS+GI LWE+F+LG +PYP +P++ +FY
Sbjct: 855  SNYISKGSTFLPLKWMAPESIFNSLYTTLSDVWSFGILLWEIFTLGGTPYPELPMNDQFY 914

Query: 1373 KMIKEGFRMLSPEHAPVEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISESTNHIYSNLA 1552
              IK G+RM  P HA  E+Y+IM+ CW+     RP F Q+V L+E+ + E     Y  + 
Sbjct: 915  NAIKRGYRMAQPAHASDEIYEIMQKCWEEKFETRPPFSQLVLLLERLLGEGYKKKYQQVD 974

Query: 1553 NCSPHRENPAV 1585
                  ++PA+
Sbjct: 975  EEFLRSDHPAI 985


>ref|NP_032835.2| beta-type platelet-derived growth factor receptor isoform 2 [Mus
            musculus].
          Length = 1098

 Score =  340 bits (872), Expect = 3e-93
 Identities = 219/611 (35%), Positives = 313/611 (51%), Gaps = 83/611 (13%)
 Frame = +2

Query: 2    LTRLKGTEGGTYTFLVSNADVNSSVTLNVYVNTKPEIL----THDRLMNGMLQCVAAGFP 169
            L R+K +E G YT    + D    ++  + VN    +L    +H       ++C   G P
Sbjct: 382  LVRVKVSEAGYYTMRAFHEDDEVQLSFKLQVNVPVRVLELSESHPANGEQTIRCRGRGMP 441

Query: 170  EPTIDWYFCPGTEQRCSVPVGPVDVQIQNSSVSPFGKLV----------IHSSIDYSAFK 319
            +P + W  C   + RC   + P  +   +   S     V          + S++      
Sbjct: 442  QPNVTWSTCRDLK-RCPRKLSPTPLGNSSKEESQLETNVTFWEEDQEYEVVSTLRLRHVD 500

Query: 320  HNGTVECRAYNDVGKSSAFFNFAFKEQIHAHTL-FTPLLIGFVIAAGMMCII-VMILTYK 493
               +V C   N +G  S       +  +  H+L F  ++I  ++A  ++ +I ++IL   
Sbjct: 501  QPLSVRCMLQNSMGGDSQ------EVTVVPHSLPFKVVVISAILALVVLTVISLIILIML 554

Query: 494  YLQKPMYEVQWKVVEEIN--GNNYVYIDPTQLPYDHKWEFPRNRLSFGKTLGAGAFGKVV 667
            + +KP YE++WKV+E ++  G+ Y+Y+DP QLPYD  WE PR++L  G+TLG+GAFG+VV
Sbjct: 555  WQKKPRYEIRWKVIESVSSDGHEYIYVDPVQLPYDSTWELPRDQLVLGRTLGSGAFGQVV 614

Query: 668  EATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGG 847
            EATA+GL  S A M VAVKMLK +A  +E++ALMSELK++S+LG H+N+VNLLGACT GG
Sbjct: 615  EATAHGLSHSQATMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNVVNLLGACTKGG 674

Query: 848  PTLVITEYCCYGDLLNFLRRKRDSFICSKQEDHA--EAALYKNL------LHSKESSCSD 1003
            P  +ITEYC YGDL+++L R + +F+      H    A LY N       L S  +   +
Sbjct: 675  PIYIITEYCRYGDLVDYLHRNKHTFLQRHSNKHCPPSAELYSNALPVGFSLPSHLNLTGE 734

Query: 1004 STNEYMDMK--PGVSYV--VPTKAD-KRRSARIGSYI-----------ERDVTPAIMXXX 1135
            S   YMDM     + YV  +  K D K       SY+           ER    A +   
Sbjct: 735  SDGGYMDMSKDESIDYVPMLDMKGDIKYADIESPSYMAPYDNYVPSAPERTYR-ATLIND 793

Query: 1136 XXXXXXXXXXSFSYQVAKGMAFLASKN-------AR------------------------ 1222
                       FSYQVA GM FLASKN       AR                        
Sbjct: 794  SPVLSYTDLVGFSYQVANGMDFLASKNCVHRDLAARNVLICEGKLVKICDFGLARDIMRD 853

Query: 1223 ----------LPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFY 1372
                      LP+KWMAPESIFN +YT  SDVWS+GI LWE+F+LG +PYP +P++ +FY
Sbjct: 854  SNYISKGSTFLPLKWMAPESIFNSLYTTLSDVWSFGILLWEIFTLGGTPYPELPMNDQFY 913

Query: 1373 KMIKEGFRMLSPEHAPVEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISESTNHIYSNLA 1552
              IK G+RM  P HA  E+Y+IM+ CW+     RP F Q+V L+E+ + E     Y  + 
Sbjct: 914  NAIKRGYRMAQPAHASDEIYEIMQKCWEEKFETRPPFSQLVLLLERLLGEGYKKKYQQVD 973

Query: 1553 NCSPHRENPAV 1585
                  ++PA+
Sbjct: 974  EEFLRSDHPAI 984


>ref|NP_034359.2| FL cytokine receptor [Mus musculus].
          Length = 1000

 Score =  330 bits (845), Expect = 4e-90
 Identities = 203/587 (34%), Positives = 297/587 (50%), Gaps = 51/587 (8%)
 Frame = +2

Query: 29   GTYTFLVSNADVNSSVTLNVYVNTKPEILTHDRLMNGMLQCVAAGFPEPTIDWYFCPGTE 208
            G Y F   N D   +    + +  KP++L +         C + G+P P+  W  C    
Sbjct: 415  GEYIFYAENDDAQFTKMFTLNIRKKPQVLANASASQA--SCSSDGYPLPSWTWKKCSDKS 472

Query: 209  QRCSVPVGPVDVQIQNSSVSPFGKLVIHSSIDYSAFKHNGTVECRAYNDVGKS--SAFFN 382
              C+  + P  V  + ++   FG+ V  S+++ S       V+C AYN +G S  + F N
Sbjct: 473  PNCTEEI-PEGVWNKKANRKVFGQWVSSSTLNMSEAGKGLLVKCCAYNSMGTSCETIFLN 531

Query: 383  ----FAFKEQIHAHTLFTPLLIGFVIAAGMMCIIVMILTYKYLQKPMYEVQWKVVEEIN- 547
                F F +   +      L + F++      ++++++ +KY ++  YE Q ++++    
Sbjct: 532  SPGPFPFIQDNISFYATIGLCLPFIV------VLIVLICHKYKKQFRYESQLQMIQVTGP 585

Query: 548  -GNNYVYIDPTQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVK 724
              N Y Y+D     YD KWEFPR  L FGK LG+GAFG+V+ ATAYG+ K+  ++ VAVK
Sbjct: 586  LDNEYFYVDFRDYEYDLKWEFPRENLEFGKVLGSGAFGRVMNATAYGISKTGVSIQVAVK 645

Query: 725  MLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLR 904
            MLK  A   E+EALMSELK++++LG+H NIVNLLGACT+ GP  +I EYCCYGDLLN+LR
Sbjct: 646  MLKEKADSCEKEALMSELKMMTHLGHHDNIVNLLGACTLSGPVYLIFEYCCYGDLLNYLR 705

Query: 905  RKRDSFICSKQEDHAEAALYKNLLHSKESSCSDSTNEYMDMKPGVSYVVPTKADKRRSAR 1084
             KR+ F  +  E   E            S+ S   +  + + P +  +     +   S  
Sbjct: 706  SKREKFHRTWTEIFKEHNFSFYPTFQAHSNSSMPGSREVQLHPPLDQLSGFNGNLIHSED 765

Query: 1085 IGSYIERDVTPAIMXXXXXXXXXXXXXSFSYQVAKGMAFLASK----------------- 1213
               Y  +                     F+YQVAKGM FL  K                 
Sbjct: 766  EIEYENQKRLAEEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHG 825

Query: 1214 ------------------------NARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELF 1321
                                    NARLPVKWMAPES+F  +YT +SDVWSYGI LWE+F
Sbjct: 826  KVVKICDFGLARDILSDSSYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIF 885

Query: 1322 SLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPVEMYDIMKTCWDADPLKRPTFKQIVQL 1501
            SLG +PYPG+PVD+ FYK+I+ GF+M  P +A   +Y +M++CW  D  KRP+F  +   
Sbjct: 886  SLGVNPYPGIPVDANFYKLIQSGFKMEQPFYATEGIYFVMQSCWAFDSRKRPSFPNLTSF 945

Query: 1502 IEKQISESTNHIYSNLANCSPHRENPAVDHSVR--INSVGSSASSTQ 1636
            +  Q++E+   +Y N+    P  E+P++  + R      GS   S Q
Sbjct: 946  LGCQLAEAEEAMYQNMGGNVP--EHPSIYQNRRPLSREAGSEPPSPQ 990


>ref|NP_034337.2| fibroblast growth factor receptor 2 isoform IIIc [Mus musculus].
          Length = 840

 Score =  227 bits (578), Expect = 4e-59
 Identities = 125/326 (38%), Positives = 188/326 (57%), Gaps = 2/326 (0%)
 Frame = +2

Query: 578  QLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDA--AMTVAVKMLKPSAHLT 751
            +LP D KWEFPR++L+ GK LG G FG+VV A A G+ K     A+TVAVKMLK  A   
Sbjct: 486  ELPEDPKWEFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEK 545

Query: 752  EREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICS 931
            +   L+SE++++  +G H NI+NLLGACT  GP  VI EY   G+L  +LR +R   +  
Sbjct: 546  DLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGM-- 603

Query: 932  KQEDHAEAALYKNLLHSKESSCSDSTNEYMDMKPGVSYVVPTKADKRRSARIGSYIERDV 1111
                  E +   N +  ++ +  D  +    +  G+ Y+   K            I RD+
Sbjct: 604  ------EYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKC-----------IHRDL 646

Query: 1112 TPAIMXXXXXXXXXXXXXSFSYQVAKGMAFLASKNARLPVKWMAPESIFNCVYTFESDVW 1291
                +               +  +     +  + N RLPVKWMAPE++F+ VYT +SDVW
Sbjct: 647  AARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVW 706

Query: 1292 SYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPVEMYDIMKTCWDADPLK 1471
            S+G+ +WE+F+LG SPYPG+PV+ + +K++KEG RM  P +   E+Y +M+ CW A P +
Sbjct: 707  SFGVLMWEIFTLGGSPYPGIPVE-ELFKLLKEGHRMDKPTNCTNELYMMMRDCWHAVPSQ 765

Query: 1472 RPTFKQIVQLIEKQISESTNHIYSNL 1549
            RPTFKQ+V+ +++ ++ +TN  Y +L
Sbjct: 766  RPTFKQLVEDLDRILTLTTNEEYLDL 791


>ref|NP_963895.2| fibroblast growth factor receptor 2 isoform IIIb [Mus musculus].
          Length = 726

 Score =  227 bits (578), Expect = 4e-59
 Identities = 125/326 (38%), Positives = 188/326 (57%), Gaps = 2/326 (0%)
 Frame = +2

Query: 578  QLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDA--AMTVAVKMLKPSAHLT 751
            +LP D KWEFPR++L+ GK LG G FG+VV A A G+ K     A+TVAVKMLK  A   
Sbjct: 372  ELPEDPKWEFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEK 431

Query: 752  EREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICS 931
            +   L+SE++++  +G H NI+NLLGACT  GP  VI EY   G+L  +LR +R   +  
Sbjct: 432  DLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGM-- 489

Query: 932  KQEDHAEAALYKNLLHSKESSCSDSTNEYMDMKPGVSYVVPTKADKRRSARIGSYIERDV 1111
                  E +   N +  ++ +  D  +    +  G+ Y+   K            I RD+
Sbjct: 490  ------EYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKC-----------IHRDL 532

Query: 1112 TPAIMXXXXXXXXXXXXXSFSYQVAKGMAFLASKNARLPVKWMAPESIFNCVYTFESDVW 1291
                +               +  +     +  + N RLPVKWMAPE++F+ VYT +SDVW
Sbjct: 533  AARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVW 592

Query: 1292 SYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPVEMYDIMKTCWDADPLK 1471
            S+G+ +WE+F+LG SPYPG+PV+ + +K++KEG RM  P +   E+Y +M+ CW A P +
Sbjct: 593  SFGVLMWEIFTLGGSPYPGIPVE-ELFKLLKEGHRMDKPTNCTNELYMMMRDCWHAVPSQ 651

Query: 1472 RPTFKQIVQLIEKQISESTNHIYSNL 1549
            RPTFKQ+V+ +++ ++ +TN  Y +L
Sbjct: 652  RPTFKQLVEDLDRILTLTTNEEYLDL 677


  Database: RefSeq49_MP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 15,617,559
  Number of sequences in database:  30,036
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 30036
Number of Hits to DB: 80,051,084
Number of extensions: 2144879
Number of successful extensions: 8149
Number of sequences better than 1.0e-05: 164
Number of HSP's gapped: 7761
Number of HSP's successfully gapped: 233
Length of query: 788
Length of database: 15,617,559
Length adjustment: 109
Effective length of query: 679
Effective length of database: 12,343,635
Effective search space: 8381328165
Effective search space used: 8381328165
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)

Search to RefSeqHP_Rel49

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-012635
         (2366 letters)

Database: RefSeq49_HP.fasta 
           32,964 sequences; 18,297,164 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_001087241.1| mast/stem cell growth factor receptor isofor...  1019   0.0  
Alignment   gi|NP_000213.1| mast/stem cell growth factor receptor isoform 1...  1014   0.0  
Alignment   gi|NP_005202.2| macrophage colony-stimulating factor 1 receptor...   453   e-127
Alignment   gi|NP_006197.1| alpha-type platelet-derived growth factor recep...   363   e-100
Alignment   gi|NP_002600.1| beta-type platelet-derived growth factor recept...   337   2e-92
Alignment   gi|NP_001138390.1| fibroblast growth factor receptor 2 isoform ...   227   3e-59
Alignment   gi|NP_001138389.1| fibroblast growth factor receptor 2 isoform ...   227   3e-59
Alignment   gi|NP_001138388.1| fibroblast growth factor receptor 2 isoform ...   227   3e-59
Alignment   gi|NP_001138386.1| fibroblast growth factor receptor 2 isoform ...   227   3e-59
Alignment   gi|NP_000132.3| fibroblast growth factor receptor 2 isoform 1 p...   227   3e-59

>ref|NP_001087241.1| mast/stem cell growth factor receptor isoform 2 precursor [Homo
            sapiens].
          Length = 972

 Score = 1019 bits (2636), Expect = 0.0
 Identities = 507/593 (85%), Positives = 522/593 (88%), Gaps = 41/593 (6%)
 Frame = +2

Query: 2    LTRLKGTEGGTYTFLVSNADVNSSVTLNVYVNTKPEILTHDRLMNGMLQCVAAGFPEPTI 181
            LTRLKGTEGGTYTFLVSN+DVN+++  NVYVNTKPEILT+DRL+NGMLQCVAAGFPEPTI
Sbjct: 379  LTRLKGTEGGTYTFLVSNSDVNAAIAFNVYVNTKPEILTYDRLVNGMLQCVAAGFPEPTI 438

Query: 182  DWYFCPGTEQRCSVPVGPVDVQIQNSSVSPFGKLVIHSSIDYSAFKHNGTVECRAYNDVG 361
            DWYFCPGTEQRCS  V PVDVQ  NSS  PFGKLV+ SSID SAFKHNGTVEC+AYNDVG
Sbjct: 439  DWYFCPGTEQRCSASVLPVDVQTLNSSGPPFGKLVVQSSIDSSAFKHNGTVECKAYNDVG 498

Query: 362  KSSAFFNFAFKEQIHAHTLFTPLLIGFVIAAGMMCIIVMILTYKYLQKPMYEVQWKVVEE 541
            K+SA+FNFAFKEQIH HTLFTPLLIGFVI AGMMCIIVMILTYKYLQKPMYEVQWKVVEE
Sbjct: 499  KTSAYFNFAFKEQIHPHTLFTPLLIGFVIVAGMMCIIVMILTYKYLQKPMYEVQWKVVEE 558

Query: 542  INGNNYVYIDPTQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAV 721
            INGNNYVYIDPTQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAV
Sbjct: 559  INGNNYVYIDPTQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAV 618

Query: 722  KMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFL 901
            KMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFL
Sbjct: 619  KMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFL 678

Query: 902  RRKRDSFICSKQEDHAEAALYKNLLHSKESSCSDSTNEYMDMKPGVSYVVPTKADKRRSA 1081
            RRKRDSFICSKQEDHAEAALYKNLLHSKESSCSDSTNEYMDMKPGVSYVVPTKADKRRS 
Sbjct: 679  RRKRDSFICSKQEDHAEAALYKNLLHSKESSCSDSTNEYMDMKPGVSYVVPTKADKRRSV 738

Query: 1082 RIGSYIERDVTPAIMXXXXXXXXXXXXXSFSYQVAKGMAFLASK---------------- 1213
            RIGSYIERDVTPAIM             SFSYQVAKGMAFLASK                
Sbjct: 739  RIGSYIERDVTPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTH 798

Query: 1214 -------------------------NARLPVKWMAPESIFNCVYTFESDVWSYGIFLWEL 1318
                                     NARLPVKWMAPESIFNCVYTFESDVWSYGIFLWEL
Sbjct: 799  GRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWEL 858

Query: 1319 FSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPVEMYDIMKTCWDADPLKRPTFKQIVQ 1498
            FSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAP EMYDIMKTCWDADPLKRPTFKQIVQ
Sbjct: 859  FSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQ 918

Query: 1499 LIEKQISESTNHIYSNLANCSPHRENPAVDHSVRINSVGSSASSTQPLLVHED 1657
            LIEKQISESTNHIYSNLANCSP+R+ P VDHSVRINSVGS+ASS+QPLLVH+D
Sbjct: 919  LIEKQISESTNHIYSNLANCSPNRQKPVVDHSVRINSVGSTASSSQPLLVHDD 971


>ref|NP_000213.1| mast/stem cell growth factor receptor isoform 1 precursor [Homo
            sapiens].
          Length = 976

 Score = 1014 bits (2621), Expect = 0.0
 Identities = 507/597 (84%), Positives = 522/597 (87%), Gaps = 45/597 (7%)
 Frame = +2

Query: 2    LTRLKGTEGGTYTFLVSNADVNSSVTLNVYVNTKPEILTHDRLMNGMLQCVAAGFPEPTI 181
            LTRLKGTEGGTYTFLVSN+DVN+++  NVYVNTKPEILT+DRL+NGMLQCVAAGFPEPTI
Sbjct: 379  LTRLKGTEGGTYTFLVSNSDVNAAIAFNVYVNTKPEILTYDRLVNGMLQCVAAGFPEPTI 438

Query: 182  DWYFCPGTEQRCSVPVGPVDVQIQNSSVSPFGKLVIHSSIDYSAFKHNGTVECRAYNDVG 361
            DWYFCPGTEQRCS  V PVDVQ  NSS  PFGKLV+ SSID SAFKHNGTVEC+AYNDVG
Sbjct: 439  DWYFCPGTEQRCSASVLPVDVQTLNSSGPPFGKLVVQSSIDSSAFKHNGTVECKAYNDVG 498

Query: 362  KSSAFFNFAFK----EQIHAHTLFTPLLIGFVIAAGMMCIIVMILTYKYLQKPMYEVQWK 529
            K+SA+FNFAFK    EQIH HTLFTPLLIGFVI AGMMCIIVMILTYKYLQKPMYEVQWK
Sbjct: 499  KTSAYFNFAFKGNNKEQIHPHTLFTPLLIGFVIVAGMMCIIVMILTYKYLQKPMYEVQWK 558

Query: 530  VVEEINGNNYVYIDPTQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAM 709
            VVEEINGNNYVYIDPTQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAM
Sbjct: 559  VVEEINGNNYVYIDPTQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAM 618

Query: 710  TVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDL 889
            TVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDL
Sbjct: 619  TVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDL 678

Query: 890  LNFLRRKRDSFICSKQEDHAEAALYKNLLHSKESSCSDSTNEYMDMKPGVSYVVPTKADK 1069
            LNFLRRKRDSFICSKQEDHAEAALYKNLLHSKESSCSDSTNEYMDMKPGVSYVVPTKADK
Sbjct: 679  LNFLRRKRDSFICSKQEDHAEAALYKNLLHSKESSCSDSTNEYMDMKPGVSYVVPTKADK 738

Query: 1070 RRSARIGSYIERDVTPAIMXXXXXXXXXXXXXSFSYQVAKGMAFLASK------------ 1213
            RRS RIGSYIERDVTPAIM             SFSYQVAKGMAFLASK            
Sbjct: 739  RRSVRIGSYIERDVTPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNI 798

Query: 1214 -----------------------------NARLPVKWMAPESIFNCVYTFESDVWSYGIF 1306
                                         NARLPVKWMAPESIFNCVYTFESDVWSYGIF
Sbjct: 799  LLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIF 858

Query: 1307 LWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPVEMYDIMKTCWDADPLKRPTFK 1486
            LWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAP EMYDIMKTCWDADPLKRPTFK
Sbjct: 859  LWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFK 918

Query: 1487 QIVQLIEKQISESTNHIYSNLANCSPHRENPAVDHSVRINSVGSSASSTQPLLVHED 1657
            QIVQLIEKQISESTNHIYSNLANCSP+R+ P VDHSVRINSVGS+ASS+QPLLVH+D
Sbjct: 919  QIVQLIEKQISESTNHIYSNLANCSPNRQKPVVDHSVRINSVGSTASSSQPLLVHDD 975


>ref|NP_005202.2| macrophage colony-stimulating factor 1 receptor precursor [Homo
            sapiens].
          Length = 972

 Score =  453 bits (1166), Expect = e-127
 Identities = 257/580 (44%), Positives = 336/580 (57%), Gaps = 60/580 (10%)
 Frame = +2

Query: 2    LTRLKGTEGGTYTFLVSNADVNSSVTLNVYVNTKPEILTHDRLMNGM--LQCVAAGFPEP 175
            L RLK +E G Y+FL  N     ++T  + +   PE+      +NG   L C A+G+P+P
Sbjct: 368  LPRLKPSEAGRYSFLARNPGGWRALTFELTLRYPPEVSVIWTFINGSGTLLCAASGYPQP 427

Query: 176  TIDWYFCPGTEQRCS-VPVGPV--DVQIQNSSVSPFGKLVIHSSIDYSAFKHNGTVECRA 346
             + W  C G   RC    V  V  D   +  S  PF K+ + S +     +HN T ECRA
Sbjct: 428  NVTWLQCSGHTDRCDEAQVLQVWDDPYPEVLSQEPFHKVTVQSLLTVETLEHNQTYECRA 487

Query: 347  YNDVGKSSAFFNFAFKEQIHAHT----LFTPLLIGFVIAAGMMCIIVMILTYKYLQKPMY 514
            +N VG  S  F        H H     LFTP+++  +    ++ +++++L YKY QKP Y
Sbjct: 488  HNSVGSGSWAF-IPISAGAHTHPPDEFLFTPVVVACMSIMALLLLLLLLLLYKYKQKPKY 546

Query: 515  EVQWKVVEEINGNNYVYIDPTQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIK 694
            +V+WK++E   GN+Y +IDPTQLPY+ KWEFPRN L FGKTLGAGAFGKVVEATA+GL K
Sbjct: 547  QVRWKIIESYEGNSYTFIDPTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGK 606

Query: 695  SDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYC 874
             DA + VAVKMLK +AH  E+EALMSELK++S+LG H NIVNLLGACT GGP LVITEYC
Sbjct: 607  EDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYC 666

Query: 875  CYGDLLNFLRRKRDSFI---CSKQEDHAEAALYKNLLHSKESSCSDS------TNEYMDM 1027
            CYGDLLNFLRRK ++ +    S  +D      YKN+   K+    DS       + Y++M
Sbjct: 667  CYGDLLNFLRRKAEAMLGPSLSPGQDPEGGVDYKNIHLEKKYVRRDSGFSSQGVDTYVEM 726

Query: 1028 KPGVSYVVPTKADKRRSARIGSYIERDVTPAIMXXXXXXXXXXXXXSFSYQVAKGMAFLA 1207
            +P     V T ++        S+ E+D+                   FS QVA+GMAFLA
Sbjct: 727  RP-----VSTSSN-------DSFSEQDLD----KEDGRPLELRDLLHFSSQVAQGMAFLA 770

Query: 1208 SK-----------------------------------------NARLPVKWMAPESIFNC 1264
            SK                                         NARLPVKWMAPESIF+C
Sbjct: 771  SKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDC 830

Query: 1265 VYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPVEMYDIMK 1444
            VYT +SDVWSYGI LWE+FSLG +PYPG+ V+SKFYK++K+G++M  P  AP  +Y IM+
Sbjct: 831  VYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQ 890

Query: 1445 TCWDADPLKRPTFKQIVQLIEKQISES-TNHIYSNLANCS 1561
             CW  +P  RPTF+QI   +++Q  E      Y+NL + S
Sbjct: 891  ACWALEPTHRPTFQQICSFLQEQAQEDRRERDYTNLPSSS 930


>ref|NP_006197.1| alpha-type platelet-derived growth factor receptor precursor [Homo
            sapiens].
          Length = 1089

 Score =  363 bits (932), Expect = e-100
 Identities = 224/601 (37%), Positives = 315/601 (52%), Gaps = 73/601 (12%)
 Frame = +2

Query: 2    LTRLKGTEGGTYTFLVSNADVNSSVTLNVYVNTKPEILT-----HDRLMNGMLQCVAAGF 166
            L R K  + G YT +  N D   S T  +       IL      H       ++C A G 
Sbjct: 381  LIRAKEEDSGHYTIVAQNEDAVKSYTFELLTQVPSSILDLVDDHHGSTGGQTVRCTAEGT 440

Query: 167  PEPTIDWYFCPGTEQ---RCSVPVGPVDVQIQNSSVSPFGKLVIHSSIDYSAFKHNGTVE 337
            P P I+W  C   ++     S  +   +V    + +    +  +   + ++  +    V 
Sbjct: 441  PLPDIEWMICKDIKKCNNETSWTILANNVSNIITEIHSRDRSTVEGRVTFAKVEETIAVR 500

Query: 338  CRAYNDVGKSSAFFNFAFKEQIHAHTLFTPLLIGFVIAAGMMCIIVMILTYKYLQKPMYE 517
            C A N +G  +              T+   +L+  VI   ++ +IV+++ +K  QKP YE
Sbjct: 501  CLAKNLLGAENRELKLVAPTLRSELTVAAAVLVLLVIV--IISLIVLVVIWK--QKPRYE 556

Query: 518  VQWKVVEEIN--GNNYVYIDPTQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLI 691
            ++W+V+E I+  G+ Y+Y+DP QLPYD +WEFPR+ L  G+ LG+GAFGKVVE TAYGL 
Sbjct: 557  IRWRVIESISPDGHEYIYVDPMQLPYDSRWEFPRDGLVLGRVLGSGAFGKVVEGTAYGLS 616

Query: 692  KSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEY 871
            +S   M VAVKMLKP+A  +E++ALMSELK++++LG H+NIVNLLGACT  GP  +ITEY
Sbjct: 617  RSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGACTKSGPIYIITEY 676

Query: 872  CCYGDLLNFLRRKRDSFICSKQEDHAEAALYKNLLHSKESSCS------DSTNEYMDMKP 1033
            C YGDL+N+L + RDSF+    E   +      L  + ES+ S      ++  +YMDMK 
Sbjct: 677  CFYGDLVNYLHKNRDSFLSHHPEKPKKELDIFGLNPADESTRSYVILSFENNGDYMDMKQ 736

Query: 1034 G--VSYV-------VPTKADKRRSA--RIGSY-----IERDVTPAIMXXXXXXXXXXXXX 1165
                 YV       V   +D +RS   R  SY     ++ +V   +              
Sbjct: 737  ADTTQYVPMLERKEVSKYSDIQRSLYDRPASYKKKSMLDSEVKNLLSDDNSEGLTLLDLL 796

Query: 1166 SFSYQVAKGMAFLASKN-------AR---------------------------------- 1222
            SF+YQVA+GM FLASKN       AR                                  
Sbjct: 797  SFTYQVARGMEFLASKNCVHRDLAARNVLLAQGKIVKICDFGLARDIMHDSNYVSKGSTF 856

Query: 1223 LPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRML 1402
            LPVKWMAPESIF+ +YT  SDVWSYGI LWE+FSLG +PYPGM VDS FY  IK G+RM 
Sbjct: 857  LPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMMVDSTFYNKIKSGYRMA 916

Query: 1403 SPEHAPVEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISESTNHIYSNLANCSPHRENPA 1582
             P+HA  E+Y+IM  CW+++P KRP+F  + +++E  +       Y  +       ++PA
Sbjct: 917  KPDHATSEVYEIMVKCWNSEPEKRPSFYHLSEIVENLLPGQYKKSYEKIHLDFLKSDHPA 976

Query: 1583 V 1585
            V
Sbjct: 977  V 977


>ref|NP_002600.1| beta-type platelet-derived growth factor receptor precursor [Homo
            sapiens].
          Length = 1106

 Score =  337 bits (865), Expect = 2e-92
 Identities = 219/610 (35%), Positives = 314/610 (51%), Gaps = 82/610 (13%)
 Frame = +2

Query: 2    LTRLKGTEGGTYTFLVSNADVNSSVTLNVYVNTKPEIL----THDRLMNGMLQCVAAGFP 169
            L R+K  E G YT    + D    ++  + +N    +L    +H       ++C   G P
Sbjct: 383  LVRVKVAEAGHYTMRAFHEDAEVQLSFQLQINVPVRVLELSESHPDSGEQTVRCRGRGMP 442

Query: 170  EPTIDWYFCPGTEQRCSVPVGPVDVQIQNSSVSPFGKLVIH----------SSIDYSAFK 319
            +P I W  C   + RC   + P  +   +   S     V +          S++      
Sbjct: 443  QPNIIWSACRDLK-RCPRELPPTLLGNSSEEESQLETNVTYWEEEQEFEVVSTLRLQHVD 501

Query: 320  HNGTVECRAYNDVGKSSAFFNFAFKEQIHAHTL-FTPLLIGFVIAAGMMCII-VMILTYK 493
               +V C   N VG+ +       +  +  H+L F  ++I  ++A  ++ II ++IL   
Sbjct: 502  RPLSVRCTLRNAVGQDTQ------EVIVVPHSLPFKVVVISAILALVVLTIISLIILIML 555

Query: 494  YLQKPMYEVQWKVVEEIN--GNNYVYIDPTQLPYDHKWEFPRNRLSFGKTLGAGAFGKVV 667
            + +KP YE++WKV+E ++  G+ Y+Y+DP QLPYD  WE PR++L  G+TLG+GAFG+VV
Sbjct: 556  WQKKPRYEIRWKVIESVSSDGHEYIYVDPMQLPYDSTWELPRDQLVLGRTLGSGAFGQVV 615

Query: 668  EATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGG 847
            EATA+GL  S A M VAVKMLK +A  +E++ALMSELK++S+LG H+N+VNLLGACT GG
Sbjct: 616  EATAHGLSHSQATMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNVVNLLGACTKGG 675

Query: 848  PTLVITEYCCYGDLLNFLRRKRDSFIC--SKQEDHAEAALYKNLLH------SKESSCSD 1003
            P  +ITEYC YGDL+++L R + +F+   S +     A LY N L       S  S   +
Sbjct: 676  PIYIITEYCRYGDLVDYLHRNKHTFLQHHSDKRRPPSAELYSNALPVGLPLPSHVSLTGE 735

Query: 1004 STNEYMDMKP--GVSYV--VPTKADKRRS--------ARIGSYIE---RDVTPAIMXXXX 1138
            S   YMDM     V YV  +  K D + +        A   +Y+         A +    
Sbjct: 736  SDGGYMDMSKDESVDYVPMLDMKGDVKYADIESSNYMAPYDNYVPSAPERTCRATLINES 795

Query: 1139 XXXXXXXXXSFSYQVAKGMAFLASKN-------AR------------------------- 1222
                      FSYQVA GM FLASKN       AR                         
Sbjct: 796  PVLSYMDLVGFSYQVANGMEFLASKNCVHRDLAARNVLICEGKLVKICDFGLARDIMRDS 855

Query: 1223 ---------LPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYK 1375
                     LP+KWMAPESIFN +YT  SDVWS+GI LWE+F+LG +PYP +P++ +FY 
Sbjct: 856  NYISKGSTFLPLKWMAPESIFNSLYTTLSDVWSFGILLWEIFTLGGTPYPELPMNEQFYN 915

Query: 1376 MIKEGFRMLSPEHAPVEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISESTNHIYSNLAN 1555
             IK G+RM  P HA  E+Y+IM+ CW+     RP F Q+V L+E+ + E     Y  +  
Sbjct: 916  AIKRGYRMAQPAHASDEIYEIMQKCWEEKFEIRPPFSQLVLLLERLLGEGYKKKYQQVDE 975

Query: 1556 CSPHRENPAV 1585
                 ++PA+
Sbjct: 976  EFLRSDHPAI 985


>ref|NP_001138390.1| fibroblast growth factor receptor 2 isoform 8 precursor [Homo
            sapiens].
          Length = 704

 Score =  227 bits (579), Expect = 3e-59
 Identities = 125/327 (38%), Positives = 189/327 (57%), Gaps = 2/327 (0%)
 Frame = +2

Query: 578  QLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDA--AMTVAVKMLKPSAHLT 751
            +LP D KWEFPR++L+ GK LG G FG+VV A A G+ K     A+TVAVKMLK  A   
Sbjct: 350  ELPEDPKWEFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEK 409

Query: 752  EREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICS 931
            +   L+SE++++  +G H NI+NLLGACT  GP  VI EY   G+L  +LR +R   +  
Sbjct: 410  DLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGM-- 467

Query: 932  KQEDHAEAALYKNLLHSKESSCSDSTNEYMDMKPGVSYVVPTKADKRRSARIGSYIERDV 1111
                  E +   N +  ++ +  D  +    +  G+ Y+   K            I RD+
Sbjct: 468  ------EYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKC-----------IHRDL 510

Query: 1112 TPAIMXXXXXXXXXXXXXSFSYQVAKGMAFLASKNARLPVKWMAPESIFNCVYTFESDVW 1291
                +               +  +     +  + N RLPVKWMAPE++F+ VYT +SDVW
Sbjct: 511  AARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVW 570

Query: 1292 SYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPVEMYDIMKTCWDADPLK 1471
            S+G+ +WE+F+LG SPYPG+PV+ + +K++KEG RM  P +   E+Y +M+ CW A P +
Sbjct: 571  SFGVLMWEIFTLGGSPYPGIPVE-ELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQ 629

Query: 1472 RPTFKQIVQLIEKQISESTNHIYSNLA 1552
            RPTFKQ+V+ +++ ++ +TN  Y +L+
Sbjct: 630  RPTFKQLVEDLDRILTLTTNEEYLDLS 656


>ref|NP_001138389.1| fibroblast growth factor receptor 2 isoform 7 precursor [Homo
            sapiens].
          Length = 705

 Score =  227 bits (579), Expect = 3e-59
 Identities = 125/327 (38%), Positives = 189/327 (57%), Gaps = 2/327 (0%)
 Frame = +2

Query: 578  QLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDA--AMTVAVKMLKPSAHLT 751
            +LP D KWEFPR++L+ GK LG G FG+VV A A G+ K     A+TVAVKMLK  A   
Sbjct: 351  ELPEDPKWEFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEK 410

Query: 752  EREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICS 931
            +   L+SE++++  +G H NI+NLLGACT  GP  VI EY   G+L  +LR +R   +  
Sbjct: 411  DLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGM-- 468

Query: 932  KQEDHAEAALYKNLLHSKESSCSDSTNEYMDMKPGVSYVVPTKADKRRSARIGSYIERDV 1111
                  E +   N +  ++ +  D  +    +  G+ Y+   K            I RD+
Sbjct: 469  ------EYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKC-----------IHRDL 511

Query: 1112 TPAIMXXXXXXXXXXXXXSFSYQVAKGMAFLASKNARLPVKWMAPESIFNCVYTFESDVW 1291
                +               +  +     +  + N RLPVKWMAPE++F+ VYT +SDVW
Sbjct: 512  AARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVW 571

Query: 1292 SYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPVEMYDIMKTCWDADPLK 1471
            S+G+ +WE+F+LG SPYPG+PV+ + +K++KEG RM  P +   E+Y +M+ CW A P +
Sbjct: 572  SFGVLMWEIFTLGGSPYPGIPVE-ELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQ 630

Query: 1472 RPTFKQIVQLIEKQISESTNHIYSNLA 1552
            RPTFKQ+V+ +++ ++ +TN  Y +L+
Sbjct: 631  RPTFKQLVEDLDRILTLTTNEEYLDLS 657


>ref|NP_001138388.1| fibroblast growth factor receptor 2 isoform 6 precursor [Homo
            sapiens].
          Length = 706

 Score =  227 bits (579), Expect = 3e-59
 Identities = 125/327 (38%), Positives = 189/327 (57%), Gaps = 2/327 (0%)
 Frame = +2

Query: 578  QLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDA--AMTVAVKMLKPSAHLT 751
            +LP D KWEFPR++L+ GK LG G FG+VV A A G+ K     A+TVAVKMLK  A   
Sbjct: 352  ELPEDPKWEFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEK 411

Query: 752  EREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICS 931
            +   L+SE++++  +G H NI+NLLGACT  GP  VI EY   G+L  +LR +R   +  
Sbjct: 412  DLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGM-- 469

Query: 932  KQEDHAEAALYKNLLHSKESSCSDSTNEYMDMKPGVSYVVPTKADKRRSARIGSYIERDV 1111
                  E +   N +  ++ +  D  +    +  G+ Y+   K            I RD+
Sbjct: 470  ------EYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKC-----------IHRDL 512

Query: 1112 TPAIMXXXXXXXXXXXXXSFSYQVAKGMAFLASKNARLPVKWMAPESIFNCVYTFESDVW 1291
                +               +  +     +  + N RLPVKWMAPE++F+ VYT +SDVW
Sbjct: 513  AARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVW 572

Query: 1292 SYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPVEMYDIMKTCWDADPLK 1471
            S+G+ +WE+F+LG SPYPG+PV+ + +K++KEG RM  P +   E+Y +M+ CW A P +
Sbjct: 573  SFGVLMWEIFTLGGSPYPGIPVE-ELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQ 631

Query: 1472 RPTFKQIVQLIEKQISESTNHIYSNLA 1552
            RPTFKQ+V+ +++ ++ +TN  Y +L+
Sbjct: 632  RPTFKQLVEDLDRILTLTTNEEYLDLS 658


>ref|NP_001138386.1| fibroblast growth factor receptor 2 isoform 4 precursor [Homo
            sapiens].
          Length = 709

 Score =  227 bits (579), Expect = 3e-59
 Identities = 125/327 (38%), Positives = 189/327 (57%), Gaps = 2/327 (0%)
 Frame = +2

Query: 578  QLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDA--AMTVAVKMLKPSAHLT 751
            +LP D KWEFPR++L+ GK LG G FG+VV A A G+ K     A+TVAVKMLK  A   
Sbjct: 355  ELPEDPKWEFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEK 414

Query: 752  EREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICS 931
            +   L+SE++++  +G H NI+NLLGACT  GP  VI EY   G+L  +LR +R   +  
Sbjct: 415  DLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGM-- 472

Query: 932  KQEDHAEAALYKNLLHSKESSCSDSTNEYMDMKPGVSYVVPTKADKRRSARIGSYIERDV 1111
                  E +   N +  ++ +  D  +    +  G+ Y+   K            I RD+
Sbjct: 473  ------EYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKC-----------IHRDL 515

Query: 1112 TPAIMXXXXXXXXXXXXXSFSYQVAKGMAFLASKNARLPVKWMAPESIFNCVYTFESDVW 1291
                +               +  +     +  + N RLPVKWMAPE++F+ VYT +SDVW
Sbjct: 516  AARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVW 575

Query: 1292 SYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPVEMYDIMKTCWDADPLK 1471
            S+G+ +WE+F+LG SPYPG+PV+ + +K++KEG RM  P +   E+Y +M+ CW A P +
Sbjct: 576  SFGVLMWEIFTLGGSPYPGIPVE-ELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQ 634

Query: 1472 RPTFKQIVQLIEKQISESTNHIYSNLA 1552
            RPTFKQ+V+ +++ ++ +TN  Y +L+
Sbjct: 635  RPTFKQLVEDLDRILTLTTNEEYLDLS 661


>ref|NP_000132.3| fibroblast growth factor receptor 2 isoform 1 precursor [Homo
            sapiens].
          Length = 821

 Score =  227 bits (579), Expect = 3e-59
 Identities = 125/327 (38%), Positives = 189/327 (57%), Gaps = 2/327 (0%)
 Frame = +2

Query: 578  QLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDA--AMTVAVKMLKPSAHLT 751
            +LP D KWEFPR++L+ GK LG G FG+VV A A G+ K     A+TVAVKMLK  A   
Sbjct: 467  ELPEDPKWEFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEK 526

Query: 752  EREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICS 931
            +   L+SE++++  +G H NI+NLLGACT  GP  VI EY   G+L  +LR +R   +  
Sbjct: 527  DLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGM-- 584

Query: 932  KQEDHAEAALYKNLLHSKESSCSDSTNEYMDMKPGVSYVVPTKADKRRSARIGSYIERDV 1111
                  E +   N +  ++ +  D  +    +  G+ Y+   K            I RD+
Sbjct: 585  ------EYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKC-----------IHRDL 627

Query: 1112 TPAIMXXXXXXXXXXXXXSFSYQVAKGMAFLASKNARLPVKWMAPESIFNCVYTFESDVW 1291
                +               +  +     +  + N RLPVKWMAPE++F+ VYT +SDVW
Sbjct: 628  AARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVW 687

Query: 1292 SYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPVEMYDIMKTCWDADPLK 1471
            S+G+ +WE+F+LG SPYPG+PV+ + +K++KEG RM  P +   E+Y +M+ CW A P +
Sbjct: 688  SFGVLMWEIFTLGGSPYPGIPVE-ELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQ 746

Query: 1472 RPTFKQIVQLIEKQISESTNHIYSNLA 1552
            RPTFKQ+V+ +++ ++ +TN  Y +L+
Sbjct: 747  RPTFKQLVEDLDRILTLTTNEEYLDLS 773


  Database: RefSeq49_HP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 18,297,164
  Number of sequences in database:  32,964
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 32964
Number of Hits to DB: 93,987,288
Number of extensions: 2532481
Number of successful extensions: 9818
Number of sequences better than 1.0e-05: 197
Number of HSP's gapped: 9326
Number of HSP's successfully gapped: 280
Length of query: 788
Length of database: 18,297,164
Length adjustment: 111
Effective length of query: 677
Effective length of database: 14,638,160
Effective search space: 9910034320
Effective search space used: 9910034320
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)

Search to Sscrofa10_2

BLASTN 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-012635
         (2366 letters)

Database: Sscrofa_10.2.fasta 
           4582 sequences; 2,808,509,378 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Sscrofa_Chr08                                                        1429   0.0  
Sscrofa_Chr02                                                          62   1e-06

>Sscrofa_Chr08 
||          Length = 148491826

 Score = 1429 bits (721), Expect = 0.0
 Identities = 795/832 (95%)
 Strand = Plus / Plus

                                                                            
Query: 1535     atttattccaacttagcgaactgcagcccccaccgggagaaccccgcggtggatcattct 1594
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 43600475 atttattccaacttagcgaactgcagcccccaccgggagaaccccgcggtggatcattct 43600534

                                                                            
Query: 1595     gtgcggatcaactccgtgggcagcagtgcctcctccacgcagccgctgcttgtccacgaa 1654
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 43600535 gtgcggatcaactccgtgggcagcagtgcctcctccacgcagccgctgcttgtccacgaa 43600594

                                                                            
Query: 1655     gacgtctgaagcagaatgggtgtccnnnnnnnnnnnnnnnnnnnctcccccacagcaccg 1714
                |||||||||||||||||||||||||                   ||||||||||||||||
Sbjct: 43600595 gacgtctgaagcagaatgggtgtccggggtggggggtgggggggctcccccacagcaccg 43600654

                                                                            
Query: 1715     accgactgccattctttttggttttcataatggttattttgtttcccttcaacttgcatc 1774
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 43600655 accgactgccattctttttggttttcataatggttattttgtttcccttcaacttgcatc 43600714

                                                                            
Query: 1775     ctactccagggtagtggatgctccgctgtaatcctctttacgagcacactttagtggcca 1834
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 43600715 ctactccagggtagtggatgctccgctgtaatcctctttacgagcacactttagtggcca 43600774

                                                                            
Query: 1835     atgatttctgtcatcagctgccattgagctgtatatgttcccaatagcacgctagccccc 1894
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 43600775 atgatttctgtcatcagctgccattgagctgtatatgttcccaatagcacgctagccccc 43600834

                                                                            
Query: 1895     attaacggagagcattcagacttagggaagaggagggtaggacgggctggacaccccagg 1954
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 43600835 attaacggagagcattcagacttagggaagaggagggtaggacgggctggacaccccagg 43600894

                                                                            
Query: 1955     tccttgacaagtcttctccagtttctgtccaataagtgttgtaatggtttatttgagcac 2014
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 43600895 tccttgacaagtcttctccagtttctgtccaataagtgttgtaatggtttatttgagcac 43600954

                                                                            
Query: 2015     ctggctgtcgtcacctccggtccttgtcatcatctgtaacaatnnnnnnnnnnnnnnnnn 2074
                |||||||||||||||||||||||||||||||||||||||||||                 
Sbjct: 43600955 ctggctgtcgtcacctccggtccttgtcatcatctgtaacaatatgatgatgatgatgat 43601014

                                                                            
Query: 2075     nccagaacctaatcccttgatgtggaaaataggatgttaatcaaacaaagggcagaaaga 2134
                 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 43601015 gccagaacctaatcccttgatgtggaaaataggatgttaatcaaacaaagggcagaaaga 43601074

                                                                            
Query: 2135     agcctgtgactatctgggctcgagaagtcaagtatttcatgctgggagtaagacgtaagc 2194
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 43601075 agcctgtgactatctgggctcgagaagtcaagtatttcatgctgggagtaagacgtaagc 43601134

                                                                            
Query: 2195     catggaaaaatgctctccgggcatgaataaggctgctggccatgagcctttttactcctg 2254
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 43601135 catggaaaaatgctctccgggcatgaataaggctgctggccatgagcctttttactcctg 43601194

                                                                            
Query: 2255     acctggtttctaagtagtttgttattagggagctggatcggagggaaggcttctgcctgc 2314
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 43601195 acctggtttctaagtagtttgttattagggagctggatcggagggaaggcttctgcctgc 43601254

                                                                    
Query: 2315     attttgtatatactcatctataaattgttcatgttcacatatttgagggggg 2366
                ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 43601255 attttgtatatactcatctataaattgttcatgttcacatatttgagggggg 43601306



 Score =  365 bits (184), Expect = 7e-98
 Identities = 184/184 (100%)
 Strand = Plus / Plus

                                                                            
Query: 212      agatgttccgttcccgttgggccagtggacgtgcagatccaaaactcatctgtatcaccg 271
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 43586934 agatgttccgttcccgttgggccagtggacgtgcagatccaaaactcatctgtatcaccg 43586993

                                                                            
Query: 272      tttggaaaactagtgattcacagctccattgattacagtgcattcaaacacaacggcaca 331
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 43586994 tttggaaaactagtgattcacagctccattgattacagtgcattcaaacacaacggcaca 43587053

                                                                            
Query: 332      gtggagtgcagggcttacaacgatgtgggcaagagttctgccttttttaactttgcattt 391
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 43587054 gtggagtgcagggcttacaacgatgtgggcaagagttctgccttttttaactttgcattt 43587113

                    
Query: 392      aaag 395
                ||||
Sbjct: 43587114 aaag 43587117



 Score =  295 bits (149), Expect = 6e-77
 Identities = 152/153 (99%)
 Strand = Plus / Plus

                                                                            
Query: 844      agggcccacgctggtcattacagaatattgttgctatggtgatctcctgaattttttgag 903
                ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 43590970 agggcccaccctggtcattacagaatattgttgctatggtgatctcctgaattttttgag 43591029

                                                                            
Query: 904      acggaaacgtgattcgtttatttgctcaaagcaggaagatcacgcagaagcggcgcttta 963
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 43591030 acggaaacgtgattcgtttatttgctcaaagcaggaagatcacgcagaagcggcgcttta 43591089

                                                 
Query: 964      taagaaccttctgcattcaaaggagtcttcctg 996
                |||||||||||||||||||||||||||||||||
Sbjct: 43591090 taagaaccttctgcattcaaaggagtcttcctg 43591122



 Score =  260 bits (131), Expect = 3e-66
 Identities = 131/131 (100%)
 Strand = Plus / Plus

                                                                            
Query: 500      cagaagcccatgtatgaagtacagtggaaggttgtcgaggagataaatggaaacaattat 559
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 43588717 cagaagcccatgtatgaagtacagtggaaggttgtcgaggagataaatggaaacaattat 43588776

                                                                            
Query: 560      gtctacatagacccaacgcaacttccttatgatcacaaatgggaatttcccaggaacagg 619
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 43588777 gtctacatagacccaacgcaacttccttatgatcacaaatgggaatttcccaggaacagg 43588836

                           
Query: 620      ctgagttttgg 630
                |||||||||||
Sbjct: 43588837 ctgagttttgg 43588847



 Score =  260 bits (131), Expect = 3e-66
 Identities = 131/131 (100%)
 Strand = Plus / Plus

                                                                            
Query: 1087     aggctcatacatagaacgagatgtgactcctgccatcatggaagatgatgagttggccct 1146
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 43593739 aggctcatacatagaacgagatgtgactcctgccatcatggaagatgatgagttggccct 43593798

                                                                            
Query: 1147     agacctggaggacttgctcagcttttcttaccaagtggcaaagggcatggccttcctcgc 1206
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 43593799 agacctggaggacttgctcagcttttcttaccaagtggcaaagggcatggccttcctcgc 43593858

                           
Query: 1207     ctcgaagaatg 1217
                |||||||||||
Sbjct: 43593859 ctcgaagaatg 43593869



 Score =  228 bits (115), Expect = 1e-56
 Identities = 115/115 (100%)
 Strand = Plus / Plus

                                                                            
Query: 99       caaaaccagaaatcctgactcatgacaggctcatgaacggcatgctccagtgtgtggcgg 158
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 43583780 caaaaccagaaatcctgactcatgacaggctcatgaacggcatgctccagtgtgtggcgg 43583839

                                                                       
Query: 159      caggcttcccagagcccaccatcgattggtatttctgtccaggcaccgagcagag 213
                |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 43583840 caggcttcccagagcccaccatcgattggtatttctgtccaggcaccgagcagag 43583894



 Score =  224 bits (113), Expect = 2e-55
 Identities = 113/113 (100%)
 Strand = Plus / Plus

                                                                            
Query: 1217     gctcggctacccgtgaagtggatggcacccgagagcattttcaactgtgtctacacattt 1276
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 43597516 gctcggctacccgtgaagtggatggcacccgagagcattttcaactgtgtctacacattt 43597575

                                                                     
Query: 1277     gaaagcgatgtctggtcctatgggatttttctgtgggagctcttctctttagg 1329
                |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 43597576 gaaagcgatgtctggtcctatgggatttttctgtgggagctcttctctttagg 43597628



 Score =  222 bits (112), Expect = 7e-55
 Identities = 112/112 (100%)
 Strand = Plus / Plus

                                                                            
Query: 735      caagtgcccatttaacggaacgagaagccctaatgtctgaactcaaagtcttaagttacc 794
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 43589602 caagtgcccatttaacggaacgagaagccctaatgtctgaactcaaagtcttaagttacc 43589661

                                                                    
Query: 795      tcggtaatcacatgaatattgtgaatcttctcggcgcctgcaccattggagg 846
                ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 43589662 tcggtaatcacatgaatattgtgaatcttctcggcgcctgcaccattggagg 43589713



 Score =  216 bits (109), Expect = 4e-53
 Identities = 109/109 (100%)
 Strand = Plus / Plus

                                                                            
Query: 394      agaacaaatccatgcccacaccctcttcacgcctttgctgattggttttgtgatcgcagc 453
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 43588516 agaacaaatccatgcccacaccctcttcacgcctttgctgattggttttgtgatcgcagc 43588575

                                                                 
Query: 454      gggtatgatgtgtatcatcgtgatgattctcacctataaatatctacag 502
                |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 43588576 gggtatgatgtgtatcatcgtgatgattctcacctataaatatctacag 43588624



 Score =  210 bits (106), Expect = 3e-51
 Identities = 106/106 (100%)
 Strand = Plus / Plus

                                                                            
Query: 1429     gtatgacatcatgaagacttgctgggatgcggatcccctcaaaagaccaacgtttaagca 1488
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 43598477 gtatgacatcatgaagacttgctgggatgcggatcccctcaaaagaccaacgtttaagca 43598536

                                                              
Query: 1489     gatcgtgcagctgattgagaagcagatttcggagagcaccaatcac 1534
                ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 43598537 gatcgtgcagctgattgagaagcagatttcggagagcaccaatcac 43598582



 Score =  202 bits (102), Expect = 6e-49
 Identities = 105/106 (99%)
 Strand = Plus / Plus

                                                                            
Query: 629      ggcaaaaccttgggtgctggcgccttcgggaaagtcgttgaggccactgcatacggctta 688
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 43589412 ggcaaaaccttgggtgctggcgccttcgggaaagtcgttgaggccactgcatacggctta 43589471

                                                              
Query: 689      attaagtcagatgcggccatgaccgttgccgtgaagatgcttaaac 734
                ||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 43589472 attaagtcagatgcggccatgaccgttgccgtgaagatgctcaaac 43589517



 Score =  190 bits (96), Expect = 2e-45
 Identities = 103/104 (99%), Gaps = 1/104 (0%)
 Strand = Plus / Plus

                                                                            
Query: 1328     gggagcagcccctaccccggaatgccagttgattctaaattctacaagatgatcaaggag 1387
                ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 43597740 gggagcagcccctaccccggaatgccagt-gattctaaattctacaagatgatcaaggag 43597798

                                                            
Query: 1388     ggtttccgaatgctcagccctgagcatgcacctgtggaaatgta 1431
                ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 43597799 ggtttccgaatgctcagccctgagcatgcacctgtggaaatgta 43597842



 Score =  186 bits (94), Expect = 4e-44
 Identities = 97/98 (98%)
 Strand = Plus / Plus

                                                                            
Query: 1        cttgaccagattaaaagggaccgaaggaggcacttacacatttctcgtgtccaatgctga 60
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 43568257 cttgaccagattaaaagggaccgaaggaggcacttacacatttctcgtgtccaatgctga 43568316

                                                      
Query: 61       tgtcaattcttctgtgacacttaatgtttacgtgaaca 98
                ||||||||||||||||||| ||||||||||||||||||
Sbjct: 43568317 tgtcaattcttctgtgacatttaatgtttacgtgaaca 43568354



 Score =  186 bits (94), Expect = 4e-44
 Identities = 94/94 (100%)
 Strand = Plus / Plus

                                                                            
Query: 996      gcagtgacagtactaacgagtacatggacatgaaacccggagtgtcttatgtggtaccaa 1055
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 43593159 gcagtgacagtactaacgagtacatggacatgaaacccggagtgtcttatgtggtaccaa 43593218

                                                  
Query: 1056     ccaaggcagacaaaaggagatctgcgagaatagg 1089
                ||||||||||||||||||||||||||||||||||
Sbjct: 43593219 ccaaggcagacaaaaggagatctgcgagaatagg 43593252


>Sscrofa_Chr02 
||          Length = 162569375

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 43/47 (91%)
 Strand = Plus / Minus

                                                                
Query: 1226      cccgtgaagtggatggcacccgagagcattttcaactgtgtctacac 1272
                 ||||||||||||||||| ||||||||||| ||| |||| ||||||||
Sbjct: 157858355 cccgtgaagtggatggcccccgagagcatcttcgactgcgtctacac 157858309


  Database: Sscrofa_10.2.fasta
    Posted date:  Nov 16, 2011 10:34 AM
  Number of letters in database: 2,808,509,378
  Number of sequences in database:  4582
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4582
Number of Hits to DB: 66,673,212
Number of extensions: 363
Number of successful extensions: 363
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 362
Number of HSP's successfully gapped: 17
Length of query: 2366
Length of database: 2,808,509,378
Length adjustment: 22
Effective length of query: 2344
Effective length of database: 2,808,408,574
Effective search space: 6582909697456
Effective search space used: 6582909697456
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 18 (36.2 bits)
S2: 30 (60.0 bits)