Search to RefSeqBP_Rel49

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-012651
         (1322 letters)

Database: RefSeq49_BP.fasta 
           33,088 sequences; 17,681,374 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_776605.2| short-chain dehydrogenase/reductase 3 [Bos taur...   588   e-168
Alignment   gi|XP_002683810.1| PREDICTED: dehydrogenase/reductase (SDR fami...   339   4e-93
Alignment   gi|NP_001192862.1| epidermal retinol dehydrogenase 2 [Bos tauru...   191   2e-48
Alignment   gi|XP_002692702.1| PREDICTED: short chain dehydrogenase/reducta...   191   2e-48
Alignment   gi|NP_001039751.1| estradiol 17-beta-dehydrogenase 11 [Bos taur...   186   4e-47
Alignment   gi|NP_777159.1| retinol dehydrogenase 10 [Bos taurus].               186   5e-47
Alignment   gi|NP_001093177.1| short-chain dehydrogenase/reductase family 1...   181   1e-45
Alignment   gi|NP_001040081.1| 17-beta-hydroxysteroid dehydrogenase 13 [Bos...   179   5e-45
Alignment   gi|XP_002683809.1| PREDICTED: dehydrogenase/reductase (SDR fami...   124   2e-28
Alignment   gi|NP_001030420.1| dehydrogenase/reductase SDR family member 7B...    84   2e-16

>ref|NP_776605.2| short-chain dehydrogenase/reductase 3 [Bos taurus].
          Length = 302

 Score =  588 bits (1515), Expect = e-168
 Identities = 294/302 (97%), Positives = 297/302 (98%)
 Frame = +2

Query: 407  MVWKWLGALVVFPLQMIYLVVKAAIGLVLPAKLRDLSRENVLITGGGRGIGRQLAREFAE 586
            MVWK LGALVVFPLQMIYLVVKAA+GLVLPAKLRDLSRENVLITGGGRGIGRQLA EFAE
Sbjct: 1    MVWKRLGALVVFPLQMIYLVVKAAVGLVLPAKLRDLSRENVLITGGGRGIGRQLALEFAE 60

Query: 587  RGARKIVLWGRTEKCLKETTEEIRQMGTECHYFICDVGNREEVYQTAKAVREKVGDITIL 766
            RGARKIVLWGRTEKCLKETTEEIRQMGTECHYFICDVGNREEVYQTAKAVREKVGDITIL
Sbjct: 61   RGARKIVLWGRTEKCLKETTEEIRQMGTECHYFICDVGNREEVYQTAKAVREKVGDITIL 120

Query: 767  VNNAAVVHGKSLMDSDDDALLKSQHINTLGQFWTTKAFLPRMLELQNGHIVCLNSVLALS 946
            VNNAAVVHGKSLMDSDDDALLKSQHINTLGQFWTTKAFLPRMLELQNGHIVCLNSVLALS
Sbjct: 121  VNNAAVVHGKSLMDSDDDALLKSQHINTLGQFWTTKAFLPRMLELQNGHIVCLNSVLALS 180

Query: 947  AIPGAIDYCTSKASAFAFMESLTLGLLDCPGVSATTVLPFHTSTEMFQGMRVRFPNLFPP 1126
            AIPGAIDYCTSKASAFAFMESLTLGLLDCPGVSATTVLPFHTSTEMFQGMRVRFPNLFPP
Sbjct: 181  AIPGAIDYCTSKASAFAFMESLTLGLLDCPGVSATTVLPFHTSTEMFQGMRVRFPNLFPP 240

Query: 1127 LKPETVARKTVEAVQLNQTLLLPPWTMHVLIILKSILPQAALEEIHRFSGTYTCMNTFKG 1306
            LKPETVAR+TVEAVQLNQ LLL PWTMH LIILKSILPQAALEEIH+FSGTYTCMNTFKG
Sbjct: 241  LKPETVARRTVEAVQLNQALLLLPWTMHALIILKSILPQAALEEIHKFSGTYTCMNTFKG 300

Query: 1307 RT 1312
            RT
Sbjct: 301  RT 302


>ref|XP_002683810.1| PREDICTED: dehydrogenase/reductase (SDR family) member 3-like,
            partial [Bos taurus].
          Length = 171

 Score =  339 bits (869), Expect = 4e-93
 Identities = 167/167 (100%), Positives = 167/167 (100%)
 Frame = +2

Query: 602  IVLWGRTEKCLKETTEEIRQMGTECHYFICDVGNREEVYQTAKAVREKVGDITILVNNAA 781
            IVLWGRTEKCLKETTEEIRQMGTECHYFICDVGNREEVYQTAKAVREKVGDITILVNNAA
Sbjct: 5    IVLWGRTEKCLKETTEEIRQMGTECHYFICDVGNREEVYQTAKAVREKVGDITILVNNAA 64

Query: 782  VVHGKSLMDSDDDALLKSQHINTLGQFWTTKAFLPRMLELQNGHIVCLNSVLALSAIPGA 961
            VVHGKSLMDSDDDALLKSQHINTLGQFWTTKAFLPRMLELQNGHIVCLNSVLALSAIPGA
Sbjct: 65   VVHGKSLMDSDDDALLKSQHINTLGQFWTTKAFLPRMLELQNGHIVCLNSVLALSAIPGA 124

Query: 962  IDYCTSKASAFAFMESLTLGLLDCPGVSATTVLPFHTSTEMFQGMRV 1102
            IDYCTSKASAFAFMESLTLGLLDCPGVSATTVLPFHTSTEMFQGMRV
Sbjct: 125  IDYCTSKASAFAFMESLTLGLLDCPGVSATTVLPFHTSTEMFQGMRV 171


>ref|NP_001192862.1| epidermal retinol dehydrogenase 2 [Bos taurus].
          Length = 309

 Score =  191 bits (484), Expect = 2e-48
 Identities = 105/295 (35%), Positives = 166/295 (56%), Gaps = 3/295 (1%)
 Frame = +2

Query: 431  LVVFPLQMIYLVVKAAIGLVLPAKLRDLSRENVLITGGGRGIGRQLAREFAERGARKIVL 610
            L++F  + +  +V+A + +++P   ++++ E VLITG G G+GR LA +FA+ G+  +VL
Sbjct: 11   LLIFLGKSVLALVEAVVFVIIPKPRKNVAGEIVLITGAGSGLGRLLALKFAQLGS-VLVL 69

Query: 611  WGRTEKCLKETTEEIRQMG-TECHYFICDVGNREEVYQTAKAVREKVGDITILVNNAAVV 787
            W  +++  +ET +   + G T  + + CD   +EE+Y+ A  V+++VGD +IL+NNA +V
Sbjct: 70   WDISQESNEETCKMAVEAGATRVYAYTCDCSRKEEIYRVANQVKKEVGDASILINNAGIV 129

Query: 788  HGKSLMDSDDDALLKSQHINTLGQFWTTKAFLPRMLELQNGHIVCLNSVLALSAIPGAID 967
             G+  MD  D+ + KS  +N     WT KAFLP M+    GH+VC++S   L  + G  D
Sbjct: 130  TGRKFMDCPDELIEKSLDVNFKSHIWTYKAFLPAMIANNRGHLVCISSSAGLIGMNGLAD 189

Query: 968  YCTSKASAFAFMESLTLGLL--DCPGVSATTVLPFHTSTEMFQGMRVRFPNLFPPLKPET 1141
            YC SK +A+ F ES+ L        G+  T V PF   T MF G     P+L P L+PE 
Sbjct: 190  YCASKFAAYGFAESIFLESFTKGQNGIKTTIVCPFFIKTGMFDGCTTGCPSLLPILEPEY 249

Query: 1142 VARKTVEAVQLNQTLLLPPWTMHVLIILKSILPQAALEEIHRFSGTYTCMNTFKG 1306
              RK V+A+      L  P  ++ ++ LKS LP      +  + G +  M+ F G
Sbjct: 250  AVRKIVDAILQENMYLYMPKFIYFIVFLKSFLPLKLGLLLGEYLGAFNLMDGFTG 304


>ref|XP_002692702.1| PREDICTED: short chain dehydrogenase/reductase family 16C, member
            5-like [Bos taurus].
          Length = 309

 Score =  191 bits (484), Expect = 2e-48
 Identities = 105/295 (35%), Positives = 166/295 (56%), Gaps = 3/295 (1%)
 Frame = +2

Query: 431  LVVFPLQMIYLVVKAAIGLVLPAKLRDLSRENVLITGGGRGIGRQLAREFAERGARKIVL 610
            L++F  + +  +V+A + +++P   ++++ E VLITG G G+GR LA +FA+ G+  +VL
Sbjct: 11   LLIFLGKSVLALVEAVVFVIIPKPRKNVAGEIVLITGAGSGLGRLLALKFAQLGS-VLVL 69

Query: 611  WGRTEKCLKETTEEIRQMG-TECHYFICDVGNREEVYQTAKAVREKVGDITILVNNAAVV 787
            W  +++  +ET +   + G T  + + CD   +EE+Y+ A  V+++VGD +IL+NNA +V
Sbjct: 70   WDISQESNEETCKMAVEAGATRVYAYTCDCSRKEEIYRVANQVKKEVGDASILINNAGIV 129

Query: 788  HGKSLMDSDDDALLKSQHINTLGQFWTTKAFLPRMLELQNGHIVCLNSVLALSAIPGAID 967
             G+  MD  D+ + KS  +N     WT KAFLP M+    GH+VC++S   L  + G  D
Sbjct: 130  TGRKFMDCPDELIEKSLDVNFKSHIWTYKAFLPAMIANNRGHLVCISSSAGLIGMNGLAD 189

Query: 968  YCTSKASAFAFMESLTLGLL--DCPGVSATTVLPFHTSTEMFQGMRVRFPNLFPPLKPET 1141
            YC SK +A+ F ES+ L        G+  T V PF   T MF G     P+L P L+PE 
Sbjct: 190  YCASKFAAYGFAESIFLESFTKGQNGIKTTIVCPFFIKTGMFDGCTTGCPSLLPILEPEY 249

Query: 1142 VARKTVEAVQLNQTLLLPPWTMHVLIILKSILPQAALEEIHRFSGTYTCMNTFKG 1306
              RK V+A+      L  P  ++ ++ LKS LP      +  + G +  M+ F G
Sbjct: 250  AVRKIVDAILQENMYLYMPKFIYFIVFLKSFLPLKLGLLLGEYLGAFNLMDGFTG 304


>ref|NP_001039751.1| estradiol 17-beta-dehydrogenase 11 [Bos taurus].
          Length = 316

 Score =  186 bits (472), Expect = 4e-47
 Identities = 101/286 (35%), Positives = 168/286 (58%), Gaps = 2/286 (0%)
 Frame = +2

Query: 392  SAARRMVWKWLGALVVFPLQMIYLVVKAAIGLVLPAKLRDLSRENVLITGGGRGIGRQLA 571
            S  ++ +  +L + ++ P  ++  +V++ + L +P K + ++ E VLITG G GIGRQ A
Sbjct: 11   SQQQKRIQFFLASFLLLPFLLV-CIVESLLKLFIPKKRKSVTGEIVLITGAGHGIGRQTA 69

Query: 572  REFAERGARKIVLWGRTEKCLKETTEEIRQMGTECHYFICDVGNREEVYQTAKAVREKVG 751
             EFA+    K+VLW   +  L+ET  E +++G + H F+ D  NRE++Y +AK V+ +VG
Sbjct: 70   YEFAKLKC-KLVLWDINKHGLEETATECKRLGAKAHTFVVDCSNREDIYSSAKKVKAEVG 128

Query: 752  DITILVNNAAVVHGKSLMDSDDDALLKSQHINTLGQFWTTKAFLPRMLELQNGHIVCLNS 931
            D++ILVNNA VV+   L  + D  + K+  +N L  FWTTKAFLP M++  +GHIV + S
Sbjct: 129  DVSILVNNAGVVYTSDLFATQDPQIEKTFEVNILAHFWTTKAFLPEMMKNNHGHIVTVAS 188

Query: 932  VLALSAIPGAIDYCTSKASAFAFMESLT--LGLLDCPGVSATTVLPFHTSTEMFQGMRVR 1105
                + +P  + YC+SK +A  F ++LT  L  L   GV  T + P   +T   +     
Sbjct: 189  AAGHTGVPFLLAYCSSKFAAVGFHKALTEELSALKRTGVKTTCLCPNFINTGFIKNPST- 247

Query: 1106 FPNLFPPLKPETVARKTVEAVQLNQTLLLPPWTMHVLIILKSILPQ 1243
              +L P L+PE V  K ++ +   Q ++  P +++ L +++ +LP+
Sbjct: 248  --SLGPTLEPEEVVNKLIDGILTEQKMIFVPSSLNFLSLMEKVLPE 291


>ref|NP_777159.1| retinol dehydrogenase 10 [Bos taurus].
          Length = 341

 Score =  186 bits (471), Expect = 5e-47
 Identities = 111/317 (35%), Positives = 169/317 (53%), Gaps = 29/317 (9%)
 Frame = +2

Query: 437  VFPLQMIYLVVKAAIGLVLPAKLRDLSRENVLITGGGRGIGRQLAREFAERGARKIVLWG 616
            V   ++++  V AA   ++  K + ++ +  LITG G G+GR  A EFA R A  +VLW 
Sbjct: 9    VVTFKVLWAFVLAAARWLVRPKEKSVAGQVCLITGAGSGLGRLFALEFARRRAL-LVLWD 67

Query: 617  RTEKCLKETTEEIRQM-------------------------GTECHYFICDVGNREEVYQ 721
               +  +ET   +R +                           +   + CDVG RE VY 
Sbjct: 68   INTQSNEETAGMVRHIYRDLEAADAAALQAGNGEEEILPHCNLQVFTYTCDVGKRENVYL 127

Query: 722  TAKAVREKVGDITILVNNAAVVHGKSLMDSDDDALLKSQHINTLGQFWTTKAFLPRMLEL 901
            TA+ VR++VG++++LVNNA VV G  L++  D+ + ++  +N    FWTTKAFLP MLE+
Sbjct: 128  TAERVRKEVGEVSVLVNNAGVVSGHHLLECPDELIERTMMVNCHAHFWTTKAFLPTMLEI 187

Query: 902  QNGHIVCLNSVLALSAIPGAIDYCTSKASAFAFMESLT--LGLLDCPGVSATTVLPFHTS 1075
             +GHIV + S L L +  G  DYC SK     F ESL+  L   +  G+  T V P+   
Sbjct: 188  NHGHIVTVASSLGLFSTAGVEDYCASKFGVVGFHESLSHELKAAEKDGIKTTLVCPYLVD 247

Query: 1076 TEMFQGMRVR--FPNLFPPLKPETVARKTVEAVQLNQTLLLPPWTMHVLIILKSILPQAA 1249
            T MF+G R+R       PPLKP+   ++ ++A+  +Q ++  P  M+++  +KSILP  A
Sbjct: 248  TGMFRGCRIRKEIEPFLPPLKPDYCVKQAMKAILTDQPMICTPRLMYIVTFMKSILPFEA 307

Query: 1250 LEEIHRFSGTYTCMNTF 1300
            +  ++RF G   CM  F
Sbjct: 308  VVCMYRFLGADKCMYPF 324


>ref|NP_001093177.1| short-chain dehydrogenase/reductase family 16C member 6 [Bos taurus].
          Length = 316

 Score =  181 bits (459), Expect = 1e-45
 Identities = 103/291 (35%), Positives = 162/291 (55%), Gaps = 3/291 (1%)
 Frame = +2

Query: 437  VFPLQMIYLVVKAAIGLVLPAKLRDLSRENVLITGGGRGIGRQLAREFAERGARKIVLWG 616
            +F  + +Y  +++    ++P K +D++ E VLITG   G+GR LA +FA  GA  +VLW 
Sbjct: 9    IFLGKFLYYFLESLYYKIIPKKKKDVTGEIVLITGAASGLGRLLAIKFASLGAI-LVLWD 67

Query: 617  RTEKCLKETTEEIRQ-MGTECHYFICDVGNREEVYQTAKAVREKVGDITILVNNAAVVHG 793
              E+   ET   I++    +   + CD  NR++VY+ A  V+++VG++TIL+NNA VV G
Sbjct: 68   INEEGNMETCRIIKEERDAKVFAYTCDCSNRQDVYRVADQVKKEVGNVTILINNAGVVTG 127

Query: 794  KSLMDSDDDALLKSQHINTLGQFWTTKAFLPRMLELQNGHIVCLNSVLALSAIPGAIDYC 973
            +  + + D  + +S  +N +  FWT KAFLP MLE  +GH+VC++S   +  I    DYC
Sbjct: 128  REFLKTPDHMVERSFLVNVMSHFWTYKAFLPAMLEANHGHLVCISSFAGIVGINELSDYC 187

Query: 974  TSKASAFAFMESL--TLGLLDCPGVSATTVLPFHTSTEMFQGMRVRFPNLFPPLKPETVA 1147
             SK +A+ F ESL   L LL    ++ T V P+   T MF+G   ++P L P L  E  A
Sbjct: 188  ASKFAAYGFAESLHFELKLLQKSKINTTIVCPYFIKTGMFEGCSTKYPLLLPMLTQEYAA 247

Query: 1148 RKTVEAVQLNQTLLLPPWTMHVLIILKSILPQAALEEIHRFSGTYTCMNTF 1300
            +  + A+   Q  L+ P   HV + LK I+    +  +  + G    + +F
Sbjct: 248  QSILNAILEEQLYLIMPRFSHVALFLKQIISTNMMMTMAEYLGMDISLASF 298


>ref|NP_001040081.1| 17-beta-hydroxysteroid dehydrogenase 13 [Bos taurus].
          Length = 300

 Score =  179 bits (454), Expect = 5e-45
 Identities = 95/280 (33%), Positives = 163/280 (58%), Gaps = 2/280 (0%)
 Frame = +2

Query: 431  LVVFPLQMIYLVVKAAIGLVLPAKLRDLSRENVLITGGGRGIGRQLAREFAERGARKIVL 610
            L++  L +IY  +++ + + +P + + ++ E VLITG G GIGRQ A EFA+R +R +VL
Sbjct: 7    LLLLLLIIIYSYLESLVKVFIPRRRKSVAGEIVLITGAGHGIGRQTAYEFAKRKSR-LVL 65

Query: 611  WGRTEKCLKETTEEIRQMGTECHYFICDVGNREEVYQTAKAVREKVGDITILVNNAAVVH 790
            W   +  ++ET  E R++G   H F+ D  NREE+Y +   V+++VGD+TI+VNNA  ++
Sbjct: 66   WDINKHGVEETAAECRKLGATTHVFVVDCSNREEIYSSVNQVKKEVGDVTIVVNNAGAIY 125

Query: 791  GKSLMDSDDDALLKSQHINTLGQFWTTKAFLPRMLELQNGHIVCLNSVLALSAIPGAIDY 970
               L+ + D+ + K+  +N LG FW TKA LP M+   +GHIV + SV     IP  I Y
Sbjct: 126  PADLLSTKDEEITKTFEVNILGHFWITKALLPSMIRRNHGHIVTVASVCGHGVIPYLIPY 185

Query: 971  CTSKASAFAFMESLT--LGLLDCPGVSATTVLPFHTSTEMFQGMRVRFPNLFPPLKPETV 1144
            C+SK +A  F  +LT  L  L   G+  + + P   +T   +    R   ++P L+ + V
Sbjct: 186  CSSKFAAVGFHRALTSELEALGKTGIKTSCLCPVFVNTGFTKNPSTR---IWPVLETDKV 242

Query: 1145 ARKTVEAVQLNQTLLLPPWTMHVLIILKSILPQAALEEIH 1264
             R  ++ +  ++ ++  P  +++ + ++  LP+ A+  I+
Sbjct: 243  VRSLIDGILTDKKMIFVPSYINISLTIERFLPERAVAAIN 282


>ref|XP_002683809.1| PREDICTED: dehydrogenase/reductase (SDR family) member 3-like [Bos
           taurus].
          Length = 83

 Score =  124 bits (311), Expect = 2e-28
 Identities = 63/65 (96%), Positives = 64/65 (98%)
 Frame = +2

Query: 407 MVWKWLGALVVFPLQMIYLVVKAAIGLVLPAKLRDLSRENVLITGGGRGIGRQLAREFAE 586
           MVWK LGALVVFPLQMIYLVVKAA+GLVLPAKLRDLSRENVLITGGGRGIGRQLAREFAE
Sbjct: 1   MVWKRLGALVVFPLQMIYLVVKAAVGLVLPAKLRDLSRENVLITGGGRGIGRQLAREFAE 60

Query: 587 RGARK 601
           RGARK
Sbjct: 61  RGARK 65


>ref|NP_001030420.1| dehydrogenase/reductase SDR family member 7B [Bos taurus].
          Length = 325

 Score = 84.3 bits (207), Expect = 2e-16
 Identities = 62/238 (26%), Positives = 114/238 (47%), Gaps = 7/238 (2%)
 Frame = +2

Query: 392  SAARRMVWKWLGALVVFPLQMIYLVVKAAIGLVLPAKLRDLSRENVL-ITGGGRGIGRQL 568
            S  R  V  ++ +  + PL +  + + +   L+   ++R   R  V+ ITG   G+GR+ 
Sbjct: 9    SLLRARVMDFITSTAILPLLLGCVGLFSLFKLLQWLRMRAYVRNAVVVITGATSGLGREC 68

Query: 569  AREFAERGARKIVLWGRTEKCLKETTEEI---RQMGTECHY---FICDVGNREEVYQTAK 730
            AR F   GAR +VL GR  + L+E ++E+   R  G + H       D+ +   +   A 
Sbjct: 69   ARVFHAAGAR-LVLCGRNAEALEELSQELAASRAPGVQTHKPCTVTFDLADPGAIAGAAS 127

Query: 731  AVREKVGDITILVNNAAVVHGKSLMDSDDDALLKSQHINTLGQFWTTKAFLPRMLELQNG 910
             + +  G + +L+NNA + +  +++D+  D   +    N  G    TKA LP M+  + G
Sbjct: 128  EILQCFGHVDVLINNAGISYRGAIVDTSPDVDKRVMETNYFGPVALTKALLPAMIRRRQG 187

Query: 911  HIVCLNSVLALSAIPGAIDYCTSKASAFAFMESLTLGLLDCPGVSATTVLPFHTSTEM 1084
            H+V ++S+    ++P    Y  SK +  AF + L    ++   +  T + P +  T +
Sbjct: 188  HVVAISSIQGKISLPFRSAYAASKHATQAFFDCLR-AEVEQHDIEVTVISPGYIHTNL 244


  Database: RefSeq49_BP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 17,681,374
  Number of sequences in database:  33,088
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33088
Number of Hits to DB: 55,478,538
Number of extensions: 1782903
Number of successful extensions: 9215
Number of sequences better than 1.0e-05: 39
Number of HSP's gapped: 9050
Number of HSP's successfully gapped: 39
Length of query: 440
Length of database: 17,681,374
Length adjustment: 105
Effective length of query: 335
Effective length of database: 14,207,134
Effective search space: 4759389890
Effective search space used: 4759389890
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Animal-Genome cDNA 20110601C-012651

Animal-Genome cDNA 20110601C-012651


Search to RefSeqCP_Rel49

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-012651
         (1322 letters)

Database: RefSeq49_CP.fasta 
           33,336 sequences; 18,874,504 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|XP_544561.2| PREDICTED: similar to dehydrogenase/reductase (...   591   e-169
Alignment   gi|XP_850000.1| PREDICTED: similar to hydroxysteroid (17-beta) ...   194   2e-49
Alignment   gi|XP_860039.1| PREDICTED: similar to retinol dehydrogenase 10 ...   194   2e-49
Alignment   gi|XP_544127.2| PREDICTED: similar to retinol dehydrogenase 10 ...   192   5e-49
Alignment   gi|XP_860108.1| PREDICTED: similar to retinol dehydrogenase 10 ...   188   1e-47
Alignment   gi|XP_535646.2| PREDICTED: similar to alcohol dehydrogenase PAN...   186   6e-47
Alignment   gi|XP_849875.1| PREDICTED: similar to retinol dehydrogenase 10 ...   186   6e-47
Alignment   gi|XP_535080.2| PREDICTED: similar to epidermal retinal dehydro...   184   2e-46
Alignment   gi|XP_544970.2| PREDICTED: similar to dehydrogenase/reductase (...   174   1e-43
Alignment   gi|XP_860425.1| PREDICTED: similar to hydroxysteroid (17-beta) ...   145   8e-35

>ref|XP_544561.2| PREDICTED: similar to dehydrogenase/reductase (SDR family) member 3
            [Canis familiaris].
          Length = 302

 Score =  591 bits (1524), Expect = e-169
 Identities = 294/302 (97%), Positives = 297/302 (98%)
 Frame = +2

Query: 407  MVWKWLGALVVFPLQMIYLVVKAAIGLVLPAKLRDLSRENVLITGGGRGIGRQLAREFAE 586
            MVWKWLGALV FPLQ+IYLV KAA+GLVLPAKLRDLSRENVLITGGGRGIGRQLAREFAE
Sbjct: 1    MVWKWLGALVGFPLQIIYLVAKAAVGLVLPAKLRDLSRENVLITGGGRGIGRQLAREFAE 60

Query: 587  RGARKIVLWGRTEKCLKETTEEIRQMGTECHYFICDVGNREEVYQTAKAVREKVGDITIL 766
            RGARKIVLWGRTEKCLKETTEEIRQMGTECHYFICDVGNREEVYQTAKAVREKVGDITIL
Sbjct: 61   RGARKIVLWGRTEKCLKETTEEIRQMGTECHYFICDVGNREEVYQTAKAVREKVGDITIL 120

Query: 767  VNNAAVVHGKSLMDSDDDALLKSQHINTLGQFWTTKAFLPRMLELQNGHIVCLNSVLALS 946
            VNNAAVVHGKSLMDSDDDALLKSQHINTLGQFWTTKAFLPRMLELQNGHIVCLNSVLALS
Sbjct: 121  VNNAAVVHGKSLMDSDDDALLKSQHINTLGQFWTTKAFLPRMLELQNGHIVCLNSVLALS 180

Query: 947  AIPGAIDYCTSKASAFAFMESLTLGLLDCPGVSATTVLPFHTSTEMFQGMRVRFPNLFPP 1126
            AIPGAIDYCTSKASAFAFMESLTLGLLDCPGVSATTVLPFHTSTEMFQGMRVRFPNLFPP
Sbjct: 181  AIPGAIDYCTSKASAFAFMESLTLGLLDCPGVSATTVLPFHTSTEMFQGMRVRFPNLFPP 240

Query: 1127 LKPETVARKTVEAVQLNQTLLLPPWTMHVLIILKSILPQAALEEIHRFSGTYTCMNTFKG 1306
            LKPETVAR+TVEAVQLNQ LLL PWTMH LIILKSILPQAALEEIHRFSGTYTCMNTFKG
Sbjct: 241  LKPETVARRTVEAVQLNQALLLLPWTMHALIILKSILPQAALEEIHRFSGTYTCMNTFKG 300

Query: 1307 RT 1312
            RT
Sbjct: 301  RT 302


>ref|XP_850000.1| PREDICTED: similar to hydroxysteroid (17-beta) dehydrogenase 13
            isoform 2 [Canis familiaris].
          Length = 300

 Score =  194 bits (493), Expect = 2e-49
 Identities = 107/280 (38%), Positives = 166/280 (59%), Gaps = 2/280 (0%)
 Frame = +2

Query: 431  LVVFPLQMIYLVVKAAIGLVLPAKLRDLSRENVLITGGGRGIGRQLAREFAERGARKIVL 610
            L++  L +IY  ++A + +  P K + ++ E VLITG G GIGR  A EFA++ +R +VL
Sbjct: 7    LLLLLLTIIYSYLEALVKVFFPRKRKSVAGEIVLITGAGHGIGRWTAYEFAKQKSR-LVL 65

Query: 611  WGRTEKCLKETTEEIRQMGTECHYFICDVGNREEVYQTAKAVREKVGDITILVNNAAVVH 790
            W   +  ++ET  E R++G   H F+ D GNRE++Y + K V+++VGD+TILVNNA  V+
Sbjct: 66   WDINKHGVEETAAECRKLGATVHTFVVDCGNREDIYNSVKQVKKEVGDVTILVNNAGTVY 125

Query: 791  GKSLMDSDDDALLKSQHINTLGQFWTTKAFLPRMLELQNGHIVCLNSVLALSAIPGAIDY 970
               L+ + D+ + K+  IN LG FW TKA LP M++  +GHIV + SV     IP  I Y
Sbjct: 126  PADLLSTKDEEITKTFEINILGHFWITKALLPSMIKRNHGHIVTVASVCGHGVIPYLIPY 185

Query: 971  CTSKASAFAFMESLTLGL--LDCPGVSATTVLPFHTSTEMFQGMRVRFPNLFPPLKPETV 1144
            C+SK +A  F  +LTL L  L   G+  + + P   +T   +    R   L+P L+ +TV
Sbjct: 186  CSSKFAAVGFHRALTLELQTLGITGIKTSCLCPVFVNTGFTKNPSTR---LWPILETDTV 242

Query: 1145 ARKTVEAVQLNQTLLLPPWTMHVLIILKSILPQAALEEIH 1264
            AR  ++ +  N+ ++  P   ++ +IL   LP+ AL  I+
Sbjct: 243  ARSLIDGILTNKKMIFVPSYYNIYLILDKFLPERALAAIN 282


>ref|XP_860039.1| PREDICTED: similar to retinol dehydrogenase 10 isoform 3 [Canis
            familiaris].
          Length = 321

 Score =  194 bits (492), Expect = 2e-49
 Identities = 111/297 (37%), Positives = 169/297 (56%), Gaps = 9/297 (3%)
 Frame = +2

Query: 437  VFPLQMIYLVVKAAIGLVLPAKLRDLSRENVLITGGGRGIGRQLAREFAERGARKIVLWG 616
            V   ++++  V AA   ++  K + ++ +  LITG G G+GR  A EFA R A  +VLW 
Sbjct: 9    VVTFKVLWAFVLAAARWLVRPKEKSVAGQVCLITGAGSGLGRLFALEFARRRAL-LVLWD 67

Query: 617  RTEKCLKETTEEIRQM-----GTECHYFICDVGNREEVYQTAKAVREKVGDITILVNNAA 781
               +  +ET   +R +       +   + CDVG RE VY TA+ VR++VG++++LVNNA 
Sbjct: 68   INTQSNEETAGMVRHIYRDLEAADVFTYTCDVGKRENVYLTAERVRKEVGEVSVLVNNAG 127

Query: 782  VVHGKSLMDSDDDALLKSQHINTLGQFWTTKAFLPRMLELQNGHIVCLNSVLALSAIPGA 961
            VV G  L++  D+ + ++  +N    FWTTKAFLP MLE+ +GHIV + S L L +  G 
Sbjct: 128  VVSGHHLLECPDELIERTMMVNCHAHFWTTKAFLPTMLEINHGHIVTVASSLGLFSTAGV 187

Query: 962  IDYCTSKASAFAFMESLT--LGLLDCPGVSATTVLPFHTSTEMFQGMRVR--FPNLFPPL 1129
             DYC SK     F ESL+  L   +  G+  T V P+   T MF+G R+R       PPL
Sbjct: 188  EDYCASKFGVVGFHESLSHELKAAEKDGIKTTLVCPYLVDTGMFRGCRIRKEIEPFLPPL 247

Query: 1130 KPETVARKTVEAVQLNQTLLLPPWTMHVLIILKSILPQAALEEIHRFSGTYTCMNTF 1300
            KP+   ++ ++A+  +Q ++  P  M+++  +KSILP  A+  ++RF G   CM  F
Sbjct: 248  KPDYCVKQAMKAILTDQPMICTPRLMYIVTFMKSILPFEAVVCMYRFLGADKCMYPF 304


>ref|XP_544127.2| PREDICTED: similar to retinol dehydrogenase 10 isoform 1 [Canis
            familiaris].
          Length = 319

 Score =  192 bits (489), Expect = 5e-49
 Identities = 111/295 (37%), Positives = 168/295 (56%), Gaps = 7/295 (2%)
 Frame = +2

Query: 437  VFPLQMIYLVVKAAIGLVLPAKLRDLSRENVLITGGGRGIGRQLAREFAERGARKIVLWG 616
            V   ++++  V AA   ++  K + ++ +  LITG G G+GR  A EFA R A  +VLW 
Sbjct: 9    VVTFKVLWAFVLAAARWLVRPKEKSVAGQVCLITGAGSGLGRLFALEFARRRAL-LVLWD 67

Query: 617  RTEKCLKETT---EEIRQMGTECHYFICDVGNREEVYQTAKAVREKVGDITILVNNAAVV 787
               +  +ET    E +     +   + CDVG RE VY TA+ VR++VG++++LVNNA VV
Sbjct: 68   INTQSNEETAGMEEILPHCNLQVFTYTCDVGKRENVYLTAERVRKEVGEVSVLVNNAGVV 127

Query: 788  HGKSLMDSDDDALLKSQHINTLGQFWTTKAFLPRMLELQNGHIVCLNSVLALSAIPGAID 967
             G  L++  D+ + ++  +N    FWTTKAFLP MLE+ +GHIV + S L L +  G  D
Sbjct: 128  SGHHLLECPDELIERTMMVNCHAHFWTTKAFLPTMLEINHGHIVTVASSLGLFSTAGVED 187

Query: 968  YCTSKASAFAFMESLT--LGLLDCPGVSATTVLPFHTSTEMFQGMRVR--FPNLFPPLKP 1135
            YC SK     F ESL+  L   +  G+  T V P+   T MF+G R+R       PPLKP
Sbjct: 188  YCASKFGVVGFHESLSHELKAAEKDGIKTTLVCPYLVDTGMFRGCRIRKEIEPFLPPLKP 247

Query: 1136 ETVARKTVEAVQLNQTLLLPPWTMHVLIILKSILPQAALEEIHRFSGTYTCMNTF 1300
            +   ++ ++A+  +Q ++  P  M+++  +KSILP  A+  ++RF G   CM  F
Sbjct: 248  DYCVKQAMKAILTDQPMICTPRLMYIVTFMKSILPFEAVVCMYRFLGADKCMYPF 302


>ref|XP_860108.1| PREDICTED: similar to retinol dehydrogenase 10 isoform 4 [Canis
            familiaris].
          Length = 336

 Score =  188 bits (477), Expect = 1e-47
 Identities = 113/312 (36%), Positives = 171/312 (54%), Gaps = 24/312 (7%)
 Frame = +2

Query: 437  VFPLQMIYLVVKAAIGLVLPAKLRDLSRENVLITGGGRGIGRQLAREFAERGARKIVLWG 616
            V   ++++  V AA   ++  K + ++ +  LITG G G+GR  A EFA R A  +VLW 
Sbjct: 9    VVTFKVLWAFVLAAARWLVRPKEKSVAGQVCLITGAGSGLGRLFALEFARRRAL-LVLWD 67

Query: 617  RTEKCLKETTEEIR----------------QMGTECHY----FICDVGNREEVYQTAKAV 736
               +  +ET   +R                Q+   C+     + CDVG RE VY TA+ V
Sbjct: 68   INTQSNEETAGMVRHIYRDLEPSPGGPDPRQILPHCNLQVFTYTCDVGKRENVYLTAERV 127

Query: 737  REKVGDITILVNNAAVVHGKSLMDSDDDALLKSQHINTLGQFWTTKAFLPRMLELQNGHI 916
            R++VG++++LVNNA VV G  L++  D+ + ++  +N    FWTTKAFLP MLE+ +GHI
Sbjct: 128  RKEVGEVSVLVNNAGVVSGHHLLECPDELIERTMMVNCHAHFWTTKAFLPTMLEINHGHI 187

Query: 917  VCLNSVLALSAIPGAIDYCTSKASAFAFMESLT--LGLLDCPGVSATTVLPFHTSTEMFQ 1090
            V + S L L +  G  DYC SK     F ESL+  L   +  G+  T V P+   T MF+
Sbjct: 188  VTVASSLGLFSTAGVEDYCASKFGVVGFHESLSHELKAAEKDGIKTTLVCPYLVDTGMFR 247

Query: 1091 GMRVR--FPNLFPPLKPETVARKTVEAVQLNQTLLLPPWTMHVLIILKSILPQAALEEIH 1264
            G R+R       PPLKP+   ++ ++A+  +Q ++  P  M+++  +KSILP  A+  ++
Sbjct: 248  GCRIRKEIEPFLPPLKPDYCVKQAMKAILTDQPMICTPRLMYIVTFMKSILPFEAVVCMY 307

Query: 1265 RFSGTYTCMNTF 1300
            RF G   CM  F
Sbjct: 308  RFLGADKCMYPF 319


>ref|XP_535646.2| PREDICTED: similar to alcohol dehydrogenase PAN1B-like isoform 1
            [Canis familiaris].
          Length = 271

 Score =  186 bits (471), Expect = 6e-47
 Identities = 102/267 (38%), Positives = 159/267 (59%), Gaps = 2/267 (0%)
 Frame = +2

Query: 431  LVVFPLQMIYLVVKAAIGLVLPAKLRDLSRENVLITGGGRGIGRQLAREFAERGARKIVL 610
            L++  L +IY  ++A + +  P K + ++ E VLITG G GIGR  A EFA++ +R +VL
Sbjct: 7    LLLLLLTIIYSYLEALVKVFFPRKRKSVAGEIVLITGAGHGIGRWTAYEFAKQKSR-LVL 65

Query: 611  WGRTEKCLKETTEEIRQMGTECHYFICDVGNREEVYQTAKAVREKVGDITILVNNAAVVH 790
            W   +  ++ET  E R++G   H F+ D GNRE++Y + K V+++VGD+TILVNNA  V+
Sbjct: 66   WDINKHGVEETAAECRKLGATVHTFVVDCGNREDIYNSVKQVKKEVGDVTILVNNAGTVY 125

Query: 791  GKSLMDSDDDALLKSQHINTLGQFWTTKAFLPRMLELQNGHIVCLNSVLALSAIPGAIDY 970
               L+ + D+ + K+  IN LG FW TKA LP M++  +GHIV + SV     IP  I Y
Sbjct: 126  PADLLSTKDEEITKTFEINILGHFWITKALLPSMIKRNHGHIVTVASVCGHGVIPYLIPY 185

Query: 971  CTSKASAFAFMESLTLGL--LDCPGVSATTVLPFHTSTEMFQGMRVRFPNLFPPLKPETV 1144
            C+SK +A  F  +LTL L  L   G+  + + P   +T   +    R   L+P L+ +TV
Sbjct: 186  CSSKFAAVGFHRALTLELQTLGITGIKTSCLCPVFVNTGFTKNPSTR---LWPILETDTV 242

Query: 1145 ARKTVEAVQLNQTLLLPPWTMHVLIIL 1225
            AR  ++ +  N+ ++  P   ++ +IL
Sbjct: 243  ARSLIDGILTNKKMIFVPSYYNIYLIL 269


>ref|XP_849875.1| PREDICTED: similar to retinol dehydrogenase 10 isoform 2 [Canis
            familiaris].
          Length = 341

 Score =  186 bits (471), Expect = 6e-47
 Identities = 111/317 (35%), Positives = 169/317 (53%), Gaps = 29/317 (9%)
 Frame = +2

Query: 437  VFPLQMIYLVVKAAIGLVLPAKLRDLSRENVLITGGGRGIGRQLAREFAERGARKIVLWG 616
            V   ++++  V AA   ++  K + ++ +  LITG G G+GR  A EFA R A  +VLW 
Sbjct: 9    VVTFKVLWAFVLAAARWLVRPKEKSVAGQVCLITGAGSGLGRLFALEFARRRAL-LVLWD 67

Query: 617  RTEKCLKETTEEIRQM-------------------------GTECHYFICDVGNREEVYQ 721
               +  +ET   +R +                           +   + CDVG RE VY 
Sbjct: 68   INTQSNEETAGMVRHIYRDLEAADAAALQAGNGEEEILPHCNLQVFTYTCDVGKRENVYL 127

Query: 722  TAKAVREKVGDITILVNNAAVVHGKSLMDSDDDALLKSQHINTLGQFWTTKAFLPRMLEL 901
            TA+ VR++VG++++LVNNA VV G  L++  D+ + ++  +N    FWTTKAFLP MLE+
Sbjct: 128  TAERVRKEVGEVSVLVNNAGVVSGHHLLECPDELIERTMMVNCHAHFWTTKAFLPTMLEI 187

Query: 902  QNGHIVCLNSVLALSAIPGAIDYCTSKASAFAFMESLT--LGLLDCPGVSATTVLPFHTS 1075
             +GHIV + S L L +  G  DYC SK     F ESL+  L   +  G+  T V P+   
Sbjct: 188  NHGHIVTVASSLGLFSTAGVEDYCASKFGVVGFHESLSHELKAAEKDGIKTTLVCPYLVD 247

Query: 1076 TEMFQGMRVR--FPNLFPPLKPETVARKTVEAVQLNQTLLLPPWTMHVLIILKSILPQAA 1249
            T MF+G R+R       PPLKP+   ++ ++A+  +Q ++  P  M+++  +KSILP  A
Sbjct: 248  TGMFRGCRIRKEIEPFLPPLKPDYCVKQAMKAILTDQPMICTPRLMYIVTFMKSILPFEA 307

Query: 1250 LEEIHRFSGTYTCMNTF 1300
            +  ++RF G   CM  F
Sbjct: 308  VVCMYRFLGADKCMYPF 324


>ref|XP_535080.2| PREDICTED: similar to epidermal retinal dehydrogenase 2 [Canis
            familiaris].
          Length = 309

 Score =  184 bits (467), Expect = 2e-46
 Identities = 105/300 (35%), Positives = 167/300 (55%), Gaps = 3/300 (1%)
 Frame = +2

Query: 431  LVVFPLQMIYLVVKAAIGLVLPAKLRDLSRENVLITGGGRGIGRQLAREFAERGARKIVL 610
            LVVF  + +   +++ +  ++P   ++++ E VLITG G G+GR LA  FA  G+  +VL
Sbjct: 11   LVVFLGKSVIAFLESMVFTIIPKPRKNVAGEIVLITGAGSGLGRLLALRFARLGS-VLVL 69

Query: 611  WGRTEKCLKETTEEIRQMG-TECHYFICDVGNREEVYQTAKAVREKVGDITILVNNAAVV 787
            W   ++  ++T    R+ G T  + + CD   RE++Y+ A+ V+++VGDI+IL+NNA +V
Sbjct: 70   WDINKEGNEDTCRMAREAGATRVYAYTCDCSQREDIYRVAEQVKKEVGDISILINNAGIV 129

Query: 788  HGKSLMDSDDDALLKSQHINTLGQFWTTKAFLPRMLELQNGHIVCLNSVLALSAIPGAID 967
             GK+ +D  D+ + K+  +N     WT K+FLP M+   +GH+VC++S   L  I    D
Sbjct: 130  TGKNFLDCPDELMEKALDVNFKAHLWTCKSFLPAMIANNHGHLVCISSSAGLVGISKLAD 189

Query: 968  YCTSKASAFAFMESLTLGLL--DCPGVSATTVLPFHTSTEMFQGMRVRFPNLFPPLKPET 1141
            YC SK +A  F ES+    +     G+  T V PF  +T MF+G     P L P L+PE 
Sbjct: 190  YCASKFAALGFAESIFAETVVQKLNGIKTTIVCPFFINTGMFEGCSTVRPFLLPVLEPEY 249

Query: 1142 VARKTVEAVQLNQTLLLPPWTMHVLIILKSILPQAALEEIHRFSGTYTCMNTFKGRT*KQ 1321
            V  K V+A+   +  L  P  +  ++ LKSILP      +  + G    M+ F G+  K+
Sbjct: 250  VVDKIVDAILQEKVYLYVPRFISFVMFLKSILPVKVSLLVADYMGALNIMDGFVGKNKKE 309


>ref|XP_544970.2| PREDICTED: similar to dehydrogenase/reductase (SDR family) member 8
            [Canis familiaris].
          Length = 300

 Score =  174 bits (442), Expect = 1e-43
 Identities = 102/285 (35%), Positives = 163/285 (57%), Gaps = 2/285 (0%)
 Frame = +2

Query: 419  WLGALVVFPLQMIYLVVKAAIGLVLPAKLRDLSRENVLITGGGRGIGRQLAREFAERGAR 598
            +L  L   PL +I+  +++ + L +P K + ++ E VLITG G GIGR  A EFA+  + 
Sbjct: 4    FLQCLQFLPLLIIF-TLESLLKLFIPKKRKSVTGEIVLITGAGHGIGRLTAYEFAKLKS- 61

Query: 599  KIVLWGRTEKCLKETTEEIRQMGTECHYFICDVGNREEVYQTAKAVREKVGDITILVNNA 778
            K+VLW   +  +++T  E R++G + H F+ D  NRE++Y +A  V+ +VGD++ILVNNA
Sbjct: 62   KLVLWDINKHGIEDTAAECRRLGAKVHAFVVDCSNREDIYGSATKVKAEVGDVSILVNNA 121

Query: 779  AVVHGKSLMDSDDDALLKSQHINTLGQFWTTKAFLPRMLELQNGHIVCLNSVLALSAIPG 958
             VV+   L  + D  + K+  +N L  FWTTKAFLP M++  +GHIV + S    + +P 
Sbjct: 122  GVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPVMMKNNHGHIVTVASAAGHTGVPF 181

Query: 959  AIDYCTSKASAFAFMESLT--LGLLDCPGVSATTVLPFHTSTEMFQGMRVRFPNLFPPLK 1132
             + YC+SK +A  F ++LT  L  L+  GV  T + P   +T   +        L P L+
Sbjct: 182  LLAYCSSKFAAVGFHKALTEELAALERTGVKTTCLCPNFINTGFIKNASTA---LGPILE 238

Query: 1133 PETVARKTVEAVQLNQTLLLPPWTMHVLIILKSILPQAALEEIHR 1267
            PE V  K +  +   Q ++  P ++  L +++ ILP+  L  + R
Sbjct: 239  PEEVVDKLLNGILTEQKMIFIPSSICFLTVVEKILPERFLALLKR 283


>ref|XP_860425.1| PREDICTED: similar to hydroxysteroid (17-beta) dehydrogenase 13
            isoform 3 [Canis familiaris].
          Length = 264

 Score =  145 bits (366), Expect = 8e-35
 Identities = 94/280 (33%), Positives = 145/280 (51%), Gaps = 2/280 (0%)
 Frame = +2

Query: 431  LVVFPLQMIYLVVKAAIGLVLPAKLRDLSRENVLITGGGRGIGRQLAREFAERGARKIVL 610
            L++  L +IY  ++A + +  P K + ++ E VLITG G GIGR  A EFA++ +R +VL
Sbjct: 7    LLLLLLTIIYSYLEALVKVFFPRKRKSVAGEIVLITGAGHGIGRWTAYEFAKQKSR-LVL 65

Query: 611  WGRTEKCLKETTEEIRQMGTECHYFICDVGNREEVYQTAKAVREKVGDITILVNNAAVVH 790
            W                          D+            V+++VGD+TILVNNA  V+
Sbjct: 66   W--------------------------DINK----------VKKEVGDVTILVNNAGTVY 89

Query: 791  GKSLMDSDDDALLKSQHINTLGQFWTTKAFLPRMLELQNGHIVCLNSVLALSAIPGAIDY 970
               L+ + D+ + K+  IN LG FW TKA LP M++  +GHIV + SV     IP  I Y
Sbjct: 90   PADLLSTKDEEITKTFEINILGHFWITKALLPSMIKRNHGHIVTVASVCGHGVIPYLIPY 149

Query: 971  CTSKASAFAFMESLTLGL--LDCPGVSATTVLPFHTSTEMFQGMRVRFPNLFPPLKPETV 1144
            C+SK +A  F  +LTL L  L   G+  + + P   +T   +    R   L+P L+ +TV
Sbjct: 150  CSSKFAAVGFHRALTLELQTLGITGIKTSCLCPVFVNTGFTKNPSTR---LWPILETDTV 206

Query: 1145 ARKTVEAVQLNQTLLLPPWTMHVLIILKSILPQAALEEIH 1264
            AR  ++ +  N+ ++  P   ++ +IL   LP+ AL  I+
Sbjct: 207  ARSLIDGILTNKKMIFVPSYYNIYLILDKFLPERALAAIN 246


  Database: RefSeq49_CP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 18,874,504
  Number of sequences in database:  33,336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33336
Number of Hits to DB: 57,908,650
Number of extensions: 1824377
Number of successful extensions: 9769
Number of sequences better than 1.0e-05: 46
Number of HSP's gapped: 9521
Number of HSP's successfully gapped: 47
Length of query: 440
Length of database: 18,874,504
Length adjustment: 106
Effective length of query: 334
Effective length of database: 15,340,888
Effective search space: 5123856592
Effective search space used: 5123856592
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)

Search to RefSeqSP_Rel49

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-012651
         (1322 letters)

Database: RefSeq49_SP.fasta 
           24,897 sequences; 11,343,932 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|XP_003127650.1| PREDICTED: short-chain dehydrogenase/reducta...   477   e-135
Alignment   gi|NP_001182297.1| epidermal retinol dehydrogenase 2 [Sus scrof...   189   2e-48
Alignment   gi|NP_001230551.1| hydroxysteroid (17-beta) dehydrogenase 13 [S...   179   3e-45
Alignment   gi|XP_003129386.2| PREDICTED: estradiol 17-beta-dehydrogenase 1...   162   3e-40
Alignment   gi|XP_003355103.1| PREDICTED: LOW QUALITY PROTEIN: short-chain ...   156   3e-38
Alignment   gi|XP_001928117.2| PREDICTED: retinol dehydrogenase 10 [Sus scr...    85   1e-16
Alignment   gi|XP_001928783.1| PREDICTED: dehydrogenase/reductase SDR famil...    84   2e-16
Alignment   gi|XP_001927120.1| PREDICTED: carbonyl reductase family member ...    77   2e-14
Alignment   gi|NP_999471.1| peroxisomal multifunctional enzyme type 2 [Sus ...    69   6e-12
Alignment   gi|NP_001183950.1| hydroxysteroid dehydrogenase-like protein 2 ...    65   6e-11

>ref|XP_003127650.1| PREDICTED: short-chain dehydrogenase/reductase 3-like [Sus scrofa].
          Length = 261

 Score =  477 bits (1227), Expect = e-135
 Identities = 236/241 (97%), Positives = 237/241 (98%)
 Frame = +2

Query: 590  GARKIVLWGRTEKCLKETTEEIRQMGTECHYFICDVGNREEVYQTAKAVREKVGDITILV 769
            G   IVLWGRTEKCLKETTEEIRQMGTECHYFICDVGNREEVYQTAKAVREKVGDITILV
Sbjct: 21   GEASIVLWGRTEKCLKETTEEIRQMGTECHYFICDVGNREEVYQTAKAVREKVGDITILV 80

Query: 770  NNAAVVHGKSLMDSDDDALLKSQHINTLGQFWTTKAFLPRMLELQNGHIVCLNSVLALSA 949
            NNAAVVHGKSLMDSDDDALLKSQHINTLGQFWTTKAFLPRMLELQNGHIVCLNSVLALSA
Sbjct: 81   NNAAVVHGKSLMDSDDDALLKSQHINTLGQFWTTKAFLPRMLELQNGHIVCLNSVLALSA 140

Query: 950  IPGAIDYCTSKASAFAFMESLTLGLLDCPGVSATTVLPFHTSTEMFQGMRVRFPNLFPPL 1129
            IPGAIDYCTSKASAFAFMESLTLGLLDCPGVSATTVLPFHTSTEMFQGMRVRFPNLFPPL
Sbjct: 141  IPGAIDYCTSKASAFAFMESLTLGLLDCPGVSATTVLPFHTSTEMFQGMRVRFPNLFPPL 200

Query: 1130 KPETVARKTVEAVQLNQTLLLPPWTMHVLIILKSILPQAALEEIHRFSGTYTCMNTFKGR 1309
            KPETVAR+TVEAVQLNQTLLL PWTMHVLIILKSILPQAALEEIHRFSGTYTCMNTFKGR
Sbjct: 201  KPETVARRTVEAVQLNQTLLLLPWTMHVLIILKSILPQAALEEIHRFSGTYTCMNTFKGR 260

Query: 1310 T 1312
            T
Sbjct: 261  T 261


>ref|NP_001182297.1| epidermal retinol dehydrogenase 2 [Sus scrofa].
          Length = 309

 Score =  189 bits (481), Expect = 2e-48
 Identities = 104/293 (35%), Positives = 165/293 (56%), Gaps = 3/293 (1%)
 Frame = +2

Query: 431  LVVFPLQMIYLVVKAAIGLVLPAKLRDLSRENVLITGGGRGIGRQLAREFAERGARKIVL 610
            L+VF  + I +VV++ +   +P   + ++ E VLITG G G+GR LA +FA  G+  +VL
Sbjct: 11   LLVFLGKSILVVVESLVFTFIPVPRKKVAGEIVLITGAGSGLGRLLALKFARLGS-VLVL 69

Query: 611  WGRTEKCLKETTEEIRQMGTECHY-FICDVGNREEVYQTAKAVREKVGDITILVNNAAVV 787
            W   ++  +ET + +++ G    Y + CD   RE+VY+ A  V+++VGD++IL+NNA +V
Sbjct: 70   WDINQERNEETRKMVQEAGVAGAYAYTCDCSQREDVYRVASQVKKEVGDVSILINNAGIV 129

Query: 788  HGKSLMDSDDDALLKSQHINTLGQFWTTKAFLPRMLELQNGHIVCLNSVLALSAIPGAID 967
             G+  +D  D+ + KS  +N     WT KAFLP M+   +GH+VC++S   L  + G  D
Sbjct: 130  TGRKFLDCPDELMEKSLDVNFKAHLWTYKAFLPAMIANDHGHLVCISSSAGLIGVYGLAD 189

Query: 968  YCTSKASAFAFMESLTLGLLDC--PGVSATTVLPFHTSTEMFQGMRVRFPNLFPPLKPET 1141
            YC SK +AF F E++          G+  T V PF   T+MF+G   R   + P L+PE 
Sbjct: 190  YCASKFAAFGFAETVFFETFASKQKGIKTTIVCPFFIKTQMFEGCTSRLSYVLPILEPEY 249

Query: 1142 VARKTVEAVQLNQTLLLPPWTMHVLIILKSILPQAALEEIHRFSGTYTCMNTF 1300
               K V+A+   Q  L  P  +++++ LKS LP      +  + G +  M+ F
Sbjct: 250  AVEKIVDAILKEQLYLYMPRFIYIMVFLKSFLPPKLGMLLAEYVGAFNFMDGF 302


>ref|NP_001230551.1| hydroxysteroid (17-beta) dehydrogenase 13 [Sus scrofa].
          Length = 300

 Score =  179 bits (454), Expect = 3e-45
 Identities = 94/274 (34%), Positives = 161/274 (58%), Gaps = 2/274 (0%)
 Frame = +2

Query: 452  MIYLVVKAAIGLVLPAKLRDLSRENVLITGGGRGIGRQLAREFAERGARKIVLWGRTEKC 631
            +IY  +++ + + +P + + ++ E VL+TG G GIGR++A EFA+R +R +VLW   +  
Sbjct: 14   IIYSYLESLVKVFIPRRRKSVAGEIVLVTGAGHGIGRKIAYEFAKRKSR-LVLWDINKHG 72

Query: 632  LKETTEEIRQMGTECHYFICDVGNREEVYQTAKAVREKVGDITILVNNAAVVHGKSLMDS 811
            L+ET  E +++G   H F+ D  NREE+Y +   V+++VGDITI+VNNA  ++   L+ +
Sbjct: 73   LEETAAECKKLGATTHAFVVDCSNREEIYNSVNQVKKEVGDITIVVNNAGTIYPADLLST 132

Query: 812  DDDALLKSQHINTLGQFWTTKAFLPRMLELQNGHIVCLNSVLALSAIPGAIDYCTSKASA 991
             D+ +  +  +N LG FW TKA LP M+   +GH+V + S+     IP  I YC+SK +A
Sbjct: 133  KDEEITITFEVNILGHFWITKALLPAMMSRNHGHVVTVASLCGHGVIPYLIPYCSSKFAA 192

Query: 992  FAFMESLT--LGLLDCPGVSATTVLPFHTSTEMFQGMRVRFPNLFPPLKPETVARKTVEA 1165
              F  +LT  L  +   G+  + + P   +T   +    R   L+P L+ + VAR  ++ 
Sbjct: 193  VGFHRALTAELEAVGKTGIKTSCLCPVFVNTGFTKNPSTR---LWPILETDEVARSLIDG 249

Query: 1166 VQLNQTLLLPPWTMHVLIILKSILPQAALEEIHR 1267
            +  N+ ++  P  +++ + L+  LP+ AL  I+R
Sbjct: 250  ILTNKKMIFVPSYLNISLTLERFLPERALAAINR 283


>ref|XP_003129386.2| PREDICTED: estradiol 17-beta-dehydrogenase 11-like [Sus scrofa].
          Length = 313

 Score =  162 bits (411), Expect = 3e-40
 Identities = 89/229 (38%), Positives = 140/229 (61%), Gaps = 2/229 (0%)
 Frame = +2

Query: 419  WLGALVVFPLQMIYLVVKAAIGLVLPAKLRDLSRENVLITGGGRGIGRQLAREFAERGAR 598
            +L  L++ PL +I+  +++ + L +P K + ++ E VLITG G G+GR  A EFA+    
Sbjct: 4    FLDVLLLLPLLLIF-TLESLLKLFIPKKRKSVTGEIVLITGAGHGLGRLTAFEFAKLKC- 61

Query: 599  KIVLWGRTEKCLKETTEEIRQMGTECHYFICDVGNREEVYQTAKAVREKVGDITILVNNA 778
            K+VLW   +  L+ET +E +++G++ H F+ D  +RE++Y +AK V+ +VGD++ILVNNA
Sbjct: 62   KLVLWDINKHGLEETADECKRLGSKAHAFVVDCSDREDIYSSAKKVKAEVGDVSILVNNA 121

Query: 779  AVVHGKSLMDSDDDALLKSQHINTLGQFWTTKAFLPRMLELQNGHIVCLNSVLALSAIPG 958
             VV+   L  + D  + K+  +N L  FWTTKAFLP M++  +GHIV + S    + IP 
Sbjct: 122  GVVYTSDLFATQDPQIEKTFEVNILAHFWTTKAFLPAMMKNNHGHIVTVASAAGHAGIPF 181

Query: 959  AIDYCTSKASAFAFMESLT--LGLLDCPGVSATTVLPFHTSTEMFQGMR 1099
             + YC+SK +A  F ++LT  L  L   GV  T + P   +T   +  R
Sbjct: 182  LLAYCSSKFAAVGFHKALTEELAALKRTGVKTTCLCPNFINTGFIKNPR 230


>ref|XP_003355103.1| PREDICTED: LOW QUALITY PROTEIN: short-chain dehydrogenase/reductase
            family 16C member 6-like [Sus scrofa].
          Length = 373

 Score =  156 bits (394), Expect = 3e-38
 Identities = 103/341 (30%), Positives = 160/341 (46%), Gaps = 50/341 (14%)
 Frame = +2

Query: 437  VFPLQMIYLVVKAAIGLVLPAKLRDLSRENVLITGGGRGIGRQLAREFAERGARKIVLWG 616
            VF  + +Y  +++    ++P K +D+S E VLI G   G+GR +A E A  GA  +VLW 
Sbjct: 9    VFWGKFLYYFLESLFFKIIPKKKKDVSGEIVLIKGASSGLGRLMAIELASLGAI-LVLWD 67

Query: 617  RTEKCLKETTEEIRQMGT-ECHYFICDVGNREEVYQTAKAVREKVGDITILVNNAAVVHG 793
              E+   ET   +++ G  +   + CD  +R+EVY+ AK V+  VGD+TIL+NN  V+ G
Sbjct: 68   INEENNMETCRLVKEKGAVKAFAYKCDCSHRQEVYRVAKQVKRDVGDVTILINNTGVITG 127

Query: 794  KSLMDSDDDALLKSQHINTLGQFWT-----------------TKAFLPRMLELQ------ 904
            K  +D+ D  + ++ H N L  FW                  +  FL   + L+      
Sbjct: 128  KQFLDTPDHMVERTFHTNALSHFWAPLKGCLPGPSSSLIDWLSNLFLTGSISLKLRRQRG 187

Query: 905  ------------------------NGHIVCLNSVLALSAIPGAIDYCTSKASAFAFMESL 1012
                                    +GH+VC+ S+  L  + G   Y  SK +AF   ESL
Sbjct: 188  APLPSSGRPCSLKPPANDDSGSITHGHLVCITSIAGLLVVSGLSHYSASKFAAFGLAESL 247

Query: 1013 T--LGLLDCPGVSATTVLPFHTSTEMFQGMRVRFPNLFPPLKPETVARKTVEAVQLNQTL 1186
               L L     +  T V P+  +T MF G  +++P L+P L+ E VA+K   A+   Q  
Sbjct: 248  NLELSLQQKSKIKTTIVCPYFINTGMFDGCTIKYPFLWPMLEQEYVAQKLXNAILEEQIY 307

Query: 1187 LLPPWTMHVLIILKSILPQAALEEIHRFSGTYTCMNTFKGR 1309
            L+ P    VL++ K  L    +  +  + G  T M +F+GR
Sbjct: 308  LIMPQCFCVLLLFKQTLAPKMMIALAEYLGMETFMASFRGR 348


>ref|XP_001928117.2| PREDICTED: retinol dehydrogenase 10 [Sus scrofa].
          Length = 257

 Score = 84.7 bits (208), Expect = 1e-16
 Identities = 56/166 (33%), Positives = 84/166 (50%), Gaps = 20/166 (12%)
 Frame = +2

Query: 863  WTTKAFLPRMLELQNGHIVCLNSVLALSAIPGAIDYCTSKASAFAFMESLT--LGLLDCP 1036
            +TTKAFLP MLE+ +GHIV + S L L +  G  DYC SK     F ESL+  L   +  
Sbjct: 75   FTTKAFLPTMLEINHGHIVTVASSLGLFSTAGVEDYCASKFGVVGFHESLSHELKAAEKD 134

Query: 1037 GVSAT--TVLPFHTSTEMFQGMRV-----RFPN-----------LFPPLKPETVARKTVE 1162
            G+  T    +   T TE  +  R      ++P              PPLKP+   ++ ++
Sbjct: 135  GIKTTLRVYITRFTQTEGKETFRFTKNERKYPRTLKGGMKEIEPFLPPLKPDYCVKQAMK 194

Query: 1163 AVQLNQTLLLPPWTMHVLIILKSILPQAALEEIHRFSGTYTCMNTF 1300
            A+  +Q ++  P  M+++  +KSILP  A+  ++RF G   CM  F
Sbjct: 195  AILTDQPMICTPRLMYIVTFMKSILPFEAVVCMYRFLGADKCMYPF 240


>ref|XP_001928783.1| PREDICTED: dehydrogenase/reductase SDR family member 7 [Sus scrofa].
          Length = 339

 Score = 84.0 bits (206), Expect = 2e-16
 Identities = 54/182 (29%), Positives = 83/182 (45%), Gaps = 3/182 (1%)
 Frame = +2

Query: 527  VLITGGGRGIGRQLAREFAERGARKIVLWGRT---EKCLKETTEEIRQMGTECHYFICDV 697
            V +TG   GIG +L  + ++ G   ++   R    E+  +   E     G +      D+
Sbjct: 53   VWVTGASSGIGEELVYQLSKLGVSLVLSARRVQELERVKRRCLENGILKGKDILILPLDL 112

Query: 698  GNREEVYQTAKAVREKVGDITILVNNAAVVHGKSLMDSDDDALLKSQHINTLGQFWTTKA 877
             NR       KAV ++ G I ILVNN  V      +D+  D   +   +N LG    TK 
Sbjct: 113  ANRSSHEVATKAVLQEFGKIDILVNNGGVSQRSLCVDTSLDVYKELMEVNYLGTVSLTKC 172

Query: 878  FLPRMLELQNGHIVCLNSVLALSAIPGAIDYCTSKASAFAFMESLTLGLLDCPGVSATTV 1057
             LP M+E + G I+ +NS + + A P +  YC SK +   F  +L   L   PG++ + V
Sbjct: 173  VLPHMIEKKQGKIITVNSFMGIIAAPLSGGYCASKHALRGFFNTLRTELATYPGITVSNV 232

Query: 1058 LP 1063
             P
Sbjct: 233  CP 234


>ref|XP_001927120.1| PREDICTED: carbonyl reductase family member 4-like [Sus scrofa].
          Length = 237

 Score = 77.0 bits (188), Expect = 2e-14
 Identities = 52/189 (27%), Positives = 85/189 (44%)
 Frame = +2

Query: 533  ITGGGRGIGRQLAREFAERGARKIVLWGRTEKCLKETTEEIRQMGTECHYFICDVGNREE 712
            + GG RGIGR +AR  A+RG R  ++     + L+        +G +     CDV   ++
Sbjct: 7    VFGGSRGIGRAVARLMAQRGYRLAIV----ARNLQGARAVAGDLGGDHLALSCDVAKEQD 62

Query: 713  VYQTAKAVREKVGDITILVNNAAVVHGKSLMDSDDDALLKSQHINTLGQFWTTKAFLPRM 892
            V  T + + + +G +  LVN A +     L+ +  + +L     N LG   T KA +  M
Sbjct: 63   VQSTFEEIEKNLGPVNFLVNAAGINRDNLLVRTSTEDMLCQLQTNLLGSMLTCKAAVKTM 122

Query: 893  LELQNGHIVCLNSVLALSAIPGAIDYCTSKASAFAFMESLTLGLLDCPGVSATTVLPFHT 1072
            ++ Q G IV + SV+ L   PG   Y  SK     F  +L   +     +    V P   
Sbjct: 123  IKQQGGSIVNIGSVVGLKGNPGQSVYSASKGGLVGFSRALAKEVAK-KKIRVNVVAPGFV 181

Query: 1073 STEMFQGMR 1099
             T+M + ++
Sbjct: 182  HTDMTKDLK 190


>ref|NP_999471.1| peroxisomal multifunctional enzyme type 2 [Sus scrofa].
          Length = 737

 Score = 68.9 bits (167), Expect = 6e-12
 Identities = 61/216 (28%), Positives = 93/216 (43%), Gaps = 9/216 (4%)
 Frame = +2

Query: 527  VLITGGGRGIGRQLAREFAERGARKIVL--------WGRTEKCLKETTEEIRQMGTECHY 682
            VL+TG G G+GR  A  FAERGA  +V          G+      +  EEIR+ G +   
Sbjct: 12   VLVTGAGGGLGRTYALAFAERGASVVVNDLGGDMKGVGKGSLAADKVVEEIRRKGGKA-- 69

Query: 683  FICDVGNREEVYQTAKAVREKVGDITILVNNAAVVHGKSLMDSDDDALLKSQHINTLGQF 862
             + +  + E   +  KA  +  G I ++VNNA ++  +S     D+     Q ++  G F
Sbjct: 70   -VANYDSVEAGEKIVKAALDAFGRIDVVVNNAGILRDRSFSRISDEDWDMIQRVHLRGSF 128

Query: 863  WTTKAFLPRMLELQNGHIVCLNSVLALSAIPGAIDYCTSKASAFAFMESLTL-GLLDCPG 1039
              T+A    M +   G I+  +S   +    G  +Y  +K        SL + G  +   
Sbjct: 129  MVTRAAWDHMKKQNFGRIIMTSSAAGIYGNFGQANYSAAKLGLLGLSNSLAVEGKKN--N 186

Query: 1040 VSATTVLPFHTSTEMFQGMRVRFPNLFPPLKPETVA 1147
            +   TV P    + M QG      +L   LKPE VA
Sbjct: 187  IHCNTVAPV-AGSRMTQGFLPE--DLIEALKPEYVA 219


>ref|NP_001183950.1| hydroxysteroid dehydrogenase-like protein 2 [Sus scrofa].
          Length = 418

 Score = 65.5 bits (158), Expect = 6e-11
 Identities = 42/148 (28%), Positives = 76/148 (51%), Gaps = 6/148 (4%)
 Frame = +2

Query: 527 VLITGGGRGIGRQLAREFAERGARKIVLWGRTEKCLK------ETTEEIRQMGTECHYFI 688
           V ITG  RGIG+ +A + A+ GA  ++    T+   K         EEI+  G +    +
Sbjct: 13  VFITGASRGIGKAIALKAAKDGANVVIAAKTTQTHPKLQGTIYTAAEEIQAAGGKALPCV 72

Query: 689 CDVGNREEVYQTAKAVREKVGDITILVNNAAVVHGKSLMDSDDDALLKSQHINTLGQFWT 868
            DV + +++    +   EK G I ILVNNA+ +   + +++    +    ++NT G + T
Sbjct: 73  VDVRDEQQISDAVEKAVEKFGGIDILVNNASAISLTNTLETPTKRVDLMMNVNTRGTYLT 132

Query: 869 TKAFLPRMLELQNGHIVCLNSVLALSAI 952
           +KA +P + + +  HI+ L+  L L+ +
Sbjct: 133 SKACIPYLKKSRIAHILNLSPPLNLNPL 160


  Database: RefSeq49_SP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 11,343,932
  Number of sequences in database:  24,897
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 24897
Number of Hits to DB: 36,017,403
Number of extensions: 1169368
Number of successful extensions: 5970
Number of sequences better than 1.0e-05: 33
Number of HSP's gapped: 5871
Number of HSP's successfully gapped: 34
Length of query: 440
Length of database: 11,343,932
Length adjustment: 102
Effective length of query: 338
Effective length of database: 8,804,438
Effective search space: 2975900044
Effective search space used: 2975900044
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)

Search to RefSeqMP_Rel49

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-012651
         (1322 letters)

Database: RefSeq49_MP.fasta 
           30,036 sequences; 15,617,559 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_035433.1| short-chain dehydrogenase/reductase 3 isoform 1...   581   e-166
Alignment   gi|NP_001165895.1| short-chain dehydrogenase/reductase 3 isofor...   531   e-151
Alignment   gi|NP_001074179.1| short-chain dehydrogenase/reductase family 1...   205   6e-53
Alignment   gi|NP_871789.1| epidermal retinol dehydrogenase 2 [Mus musculus].    191   1e-48
Alignment   gi|NP_598593.1| retinol dehydrogenase 10 [Mus musculus].             185   8e-47
Alignment   gi|NP_001156958.1| 17-beta-hydroxysteroid dehydrogenase 13 isof...   181   1e-45
Alignment   gi|NP_444492.1| estradiol 17-beta-dehydrogenase 11 [Mus musculu...   179   4e-45
Alignment   gi|NP_932147.2| 17-beta-hydroxysteroid dehydrogenase 13 isoform...   170   3e-42
Alignment   gi|NP_001165583.1| dehydrogenase/reductase SDR family member 7B...    84   2e-16
Alignment   gi|NP_663403.1| dehydrogenase/reductase SDR family member 7B is...    84   2e-16

>ref|NP_035433.1| short-chain dehydrogenase/reductase 3 isoform 1 [Mus musculus].
          Length = 302

 Score =  581 bits (1498), Expect = e-166
 Identities = 287/302 (95%), Positives = 295/302 (97%)
 Frame = +2

Query: 407  MVWKWLGALVVFPLQMIYLVVKAAIGLVLPAKLRDLSRENVLITGGGRGIGRQLAREFAE 586
            MVWKWLGALVVFPLQMIYLV KAA+G+VLP KLRDLSRE+VLITGGGRGIGR LAREFAE
Sbjct: 1    MVWKWLGALVVFPLQMIYLVTKAAVGMVLPPKLRDLSRESVLITGGGRGIGRHLAREFAE 60

Query: 587  RGARKIVLWGRTEKCLKETTEEIRQMGTECHYFICDVGNREEVYQTAKAVREKVGDITIL 766
            RGARKIVLWGRTEKCLKETTEEIRQMGTECHYFICDVGNREEVYQ AKAVREKVGDITIL
Sbjct: 61   RGARKIVLWGRTEKCLKETTEEIRQMGTECHYFICDVGNREEVYQMAKAVREKVGDITIL 120

Query: 767  VNNAAVVHGKSLMDSDDDALLKSQHINTLGQFWTTKAFLPRMLELQNGHIVCLNSVLALS 946
            VNNAAVVHGKSLMDSDDDALLKSQH+NTLGQFWTTKAFLPRMLELQNGHIVCLNSVLALS
Sbjct: 121  VNNAAVVHGKSLMDSDDDALLKSQHVNTLGQFWTTKAFLPRMLELQNGHIVCLNSVLALS 180

Query: 947  AIPGAIDYCTSKASAFAFMESLTLGLLDCPGVSATTVLPFHTSTEMFQGMRVRFPNLFPP 1126
            AIPGAIDYCTSKASAFAFMESLTLGLLDCPGVSATTVLPFHTSTEMFQGMRVRFPNLFPP
Sbjct: 181  AIPGAIDYCTSKASAFAFMESLTLGLLDCPGVSATTVLPFHTSTEMFQGMRVRFPNLFPP 240

Query: 1127 LKPETVARKTVEAVQLNQTLLLPPWTMHVLIILKSILPQAALEEIHRFSGTYTCMNTFKG 1306
            LKPETVAR+TV+AVQ NQ LLL PWTM++LIILKSILPQAALEEIHRFSGTYTCMNTFKG
Sbjct: 241  LKPETVARRTVDAVQQNQALLLLPWTMNILIILKSILPQAALEEIHRFSGTYTCMNTFKG 300

Query: 1307 RT 1312
            RT
Sbjct: 301  RT 302


>ref|NP_001165895.1| short-chain dehydrogenase/reductase 3 isoform 2 [Mus musculus].
          Length = 276

 Score =  531 bits (1368), Expect = e-151
 Identities = 263/276 (95%), Positives = 270/276 (97%)
 Frame = +2

Query: 485  LVLPAKLRDLSRENVLITGGGRGIGRQLAREFAERGARKIVLWGRTEKCLKETTEEIRQM 664
            +VLP KLRDLSRE+VLITGGGRGIGR LAREFAERGARKIVLWGRTEKCLKETTEEIRQM
Sbjct: 1    MVLPPKLRDLSRESVLITGGGRGIGRHLAREFAERGARKIVLWGRTEKCLKETTEEIRQM 60

Query: 665  GTECHYFICDVGNREEVYQTAKAVREKVGDITILVNNAAVVHGKSLMDSDDDALLKSQHI 844
            GTECHYFICDVGNREEVYQ AKAVREKVGDITILVNNAAVVHGKSLMDSDDDALLKSQH+
Sbjct: 61   GTECHYFICDVGNREEVYQMAKAVREKVGDITILVNNAAVVHGKSLMDSDDDALLKSQHV 120

Query: 845  NTLGQFWTTKAFLPRMLELQNGHIVCLNSVLALSAIPGAIDYCTSKASAFAFMESLTLGL 1024
            NTLGQFWTTKAFLPRMLELQNGHIVCLNSVLALSAIPGAIDYCTSKASAFAFMESLTLGL
Sbjct: 121  NTLGQFWTTKAFLPRMLELQNGHIVCLNSVLALSAIPGAIDYCTSKASAFAFMESLTLGL 180

Query: 1025 LDCPGVSATTVLPFHTSTEMFQGMRVRFPNLFPPLKPETVARKTVEAVQLNQTLLLPPWT 1204
            LDCPGVSATTVLPFHTSTEMFQGMRVRFPNLFPPLKPETVAR+TV+AVQ NQ LLL PWT
Sbjct: 181  LDCPGVSATTVLPFHTSTEMFQGMRVRFPNLFPPLKPETVARRTVDAVQQNQALLLLPWT 240

Query: 1205 MHVLIILKSILPQAALEEIHRFSGTYTCMNTFKGRT 1312
            M++LIILKSILPQAALEEIHRFSGTYTCMNTFKGRT
Sbjct: 241  MNILIILKSILPQAALEEIHRFSGTYTCMNTFKGRT 276


>ref|NP_001074179.1| short-chain dehydrogenase/reductase family 16C member 6 [Mus
            musculus].
          Length = 316

 Score =  205 bits (522), Expect = 6e-53
 Identities = 116/294 (39%), Positives = 173/294 (58%), Gaps = 3/294 (1%)
 Frame = +2

Query: 437  VFPLQMIYLVVKAAIGLVLPAKLRDLSRENVLITGGGRGIGRQLAREFAERGARKIVLWG 616
            +F  + +Y  +++ +  V+P + +D+S E VLITG G G+GR LA  FA  GA  +VLW 
Sbjct: 9    IFFGKFLYYFLESLVFKVIPKRKKDVSGEIVLITGAGSGLGRLLAIHFASHGAT-LVLWD 67

Query: 617  RTEKCLKETTEEIRQMG-TECHYFICDVGNREEVYQTAKAVREKVGDITILVNNAAVVHG 793
              ++   ET   ++Q G  +   + CD  +R EVY+ A  V+E+VGD+TIL+NNA VV G
Sbjct: 68   INQEGNMETCRLVKQKGDVKVFAYKCDCSSRIEVYRVADQVKEEVGDVTILINNAGVVTG 127

Query: 794  KSLMDSDDDALLKSQHINTLGQFWTTKAFLPRMLELQNGHIVCLNSVLALSAIPGAIDYC 973
            KS +++ D  + KS  +N +  FWT KAFLP M++  +GH+VC++S+  L  I G  DY 
Sbjct: 128  KSFLNTPDHLVEKSFLVNAISHFWTCKAFLPAMVKANHGHLVCISSIAGLVGINGLSDYS 187

Query: 974  TSKASAFAFMESLTLGL--LDCPGVSATTVLPFHTSTEMFQGMRVRFPNLFPPLKPETVA 1147
            +SK +AF F ESL L L  +    V +T V P+   T MF+G   ++P L P L+ E VA
Sbjct: 188  SSKFAAFGFAESLFLELTMIMKTKVKSTIVCPYFIKTGMFEGCTTKYPLLLPLLEQEYVA 247

Query: 1148 RKTVEAVQLNQTLLLPPWTMHVLIILKSILPQAALEEIHRFSGTYTCMNTFKGR 1309
            +K   A+   Q  L+ P   +V + LK I+    +  +  + G  TCM +F GR
Sbjct: 248  QKIFNAILEEQVYLIIPKFAYVALFLKQIISPKMMIALGEYLGVDTCMTSFTGR 301


>ref|NP_871789.1| epidermal retinol dehydrogenase 2 [Mus musculus].
          Length = 309

 Score =  191 bits (485), Expect = 1e-48
 Identities = 110/296 (37%), Positives = 164/296 (55%), Gaps = 3/296 (1%)
 Frame = +2

Query: 431  LVVFPLQMIYLVVKAAIGLVLPAKLRDLSRENVLITGGGRGIGRQLAREFAERGARKIVL 610
            L+VF  + +  V++A +  V+    ++++ E VLITG G G+GR LA +FA  GA  +VL
Sbjct: 11   LLVFLGKSLLSVLEALLFHVISKPRKNVAGEIVLITGAGSGLGRLLALQFARLGA-VLVL 69

Query: 611  WGRTEKCLKETTEEIRQMGT-ECHYFICDVGNREEVYQTAKAVREKVGDITILVNNAAVV 787
            W   ++   ET +  R+ G    H + CD   REEVY+ A  V+++VGD++IL+NNA +V
Sbjct: 70   WDVNKEANDETHQLAREAGAARVHAYTCDCSRREEVYRVADQVKKEVGDVSILINNAGIV 129

Query: 788  HGKSLMDSDDDALLKSQHINTLGQFWTTKAFLPRMLELQNGHIVCLNSVLALSAIPGAID 967
             G++ +D  DD + KS  +N     W  KAFLP M+   +GH+VC++S   L  + G  D
Sbjct: 130  TGRNFLDCPDDLMEKSFDVNFKAHLWMYKAFLPAMIANNHGHLVCISSSAGLIGVNGLSD 189

Query: 968  YCTSKASAFAFMESLTLGLLDCP--GVSATTVLPFHTSTEMFQGMRVRFPNLFPPLKPET 1141
            YC SK +A  F ES+ +  L     G+  T V PF   T MF+G   + P L P L PE 
Sbjct: 190  YCASKFAALGFAESMFIETLAKKQWGIKTTIVCPFFIKTGMFEGCTTKCPTLLPILDPEY 249

Query: 1142 VARKTVEAVQLNQTLLLPPWTMHVLIILKSILPQAALEEIHRFSGTYTCMNTFKGR 1309
              RK ++A+   Q  L  P  ++ ++ LKSILP      I  + G +     F G+
Sbjct: 250  AVRKIIDAILQEQLYLYMPKFLYFIVFLKSILPIKTGILIADYLGVFHMTEGFTGQ 305


>ref|NP_598593.1| retinol dehydrogenase 10 [Mus musculus].
          Length = 341

 Score =  185 bits (469), Expect = 8e-47
 Identities = 111/317 (35%), Positives = 168/317 (52%), Gaps = 29/317 (9%)
 Frame = +2

Query: 437  VFPLQMIYLVVKAAIGLVLPAKLRDLSRENVLITGGGRGIGRQLAREFAERGARKIVLWG 616
            V   ++++  V AA   ++  K + ++ +  LITG G G+GR  A EFA R A  +VLW 
Sbjct: 9    VVTFKVLWAFVLAAARWLVRPKEKSVAGQVCLITGAGSGLGRLFALEFARRRAL-LVLWD 67

Query: 617  RTEKCLKETTEEIRQM-------------------------GTECHYFICDVGNREEVYQ 721
               +  +ET   +R +                           +   + CDVG RE VY 
Sbjct: 68   INTQSNEETAGMVRHIYRDLEAADAAALQAGKGEEEILPPCNLQVFTYTCDVGKRENVYL 127

Query: 722  TAKAVREKVGDITILVNNAAVVHGKSLMDSDDDALLKSQHINTLGQFWTTKAFLPRMLEL 901
            TA+ VR++VG++++LVNNA VV G  L++  D+ + ++  +N    FWTTKAFLP MLE+
Sbjct: 128  TAERVRKEVGEVSVLVNNAGVVSGHHLLECPDELIERTMMVNCHAHFWTTKAFLPTMLEI 187

Query: 902  QNGHIVCLNSVLALSAIPGAIDYCTSKASAFAFMESLT--LGLLDCPGVSATTVLPFHTS 1075
             +GHIV + S L L +  G  DYC SK     F ESL+  L   +  G+  T V P+   
Sbjct: 188  NHGHIVTVASSLGLFSTAGVEDYCASKFGVVGFHESLSHELKAAEKDGIKTTLVCPYLVD 247

Query: 1076 TEMFQGMRVR--FPNLFPPLKPETVARKTVEAVQLNQTLLLPPWTMHVLIILKSILPQAA 1249
            T MF+G R+R       PPLKP+   ++ + A+  +Q ++  P  M+++  +KSILP  A
Sbjct: 248  TGMFRGCRIRKEIEPFLPPLKPDYCVKQAMRAILTDQPMVCTPRLMYIVTFMKSILPFEA 307

Query: 1250 LEEIHRFSGTYTCMNTF 1300
            +  ++RF G   CM  F
Sbjct: 308  VVCMYRFLGADKCMYPF 324


>ref|NP_001156958.1| 17-beta-hydroxysteroid dehydrogenase 13 isoform 1 [Mus musculus].
          Length = 300

 Score =  181 bits (458), Expect = 1e-45
 Identities = 96/274 (35%), Positives = 158/274 (57%), Gaps = 2/274 (0%)
 Frame = +2

Query: 452  MIYLVVKAAIGLVLPAKLRDLSRENVLITGGGRGIGRQLAREFAERGARKIVLWGRTEKC 631
            +IY  +++ +   +P + + ++ + VLITG G GIGR  A EFA++ +R +VLW   ++ 
Sbjct: 14   IIYSYLESLVKFFIPRRRKSVTGQTVLITGAGHGIGRLTAYEFAKQKSR-LVLWDINKRG 72

Query: 632  LKETTEEIRQMGTECHYFICDVGNREEVYQTAKAVREKVGDITILVNNAAVVHGKSLMDS 811
            ++ET ++ R++G   H F+ D  NR E+Y +   V+ +VGD+ I+VNNA  ++   L+ +
Sbjct: 73   VEETADKCRKLGAVVHVFVVDCSNRAEIYNSVDQVKREVGDVEIVVNNAGAIYPADLLSA 132

Query: 812  DDDALLKSQHINTLGQFWTTKAFLPRMLELQNGHIVCLNSVLALSAIPGAIDYCTSKASA 991
             D+ + K+  +N LG FW  KA LP ML   +GHIV + SV     IP  I YC+SK +A
Sbjct: 133  KDEEITKTFEVNILGHFWIIKALLPSMLRRNSGHIVTVASVCGHGVIPYLIPYCSSKFAA 192

Query: 992  FAFMESLT--LGLLDCPGVSATTVLPFHTSTEMFQGMRVRFPNLFPPLKPETVARKTVEA 1165
              F  +LT  L  L   G+  + + P   +T   +    R   L+P L+PE VAR  +  
Sbjct: 193  VGFHRALTAELDTLGKTGIQTSCLCPVFVNTGFTKNPSTR---LWPVLEPEEVARSLING 249

Query: 1166 VQLNQTLLLPPWTMHVLIILKSILPQAALEEIHR 1267
            +  N+ ++  P  +++ +IL+  LP+ AL+ I R
Sbjct: 250  ILTNKKMIFVPSYINISLILEKFLPERALKAISR 283


>ref|NP_444492.1| estradiol 17-beta-dehydrogenase 11 [Mus musculus].
          Length = 298

 Score =  179 bits (454), Expect = 4e-45
 Identities = 102/299 (34%), Positives = 170/299 (56%), Gaps = 3/299 (1%)
 Frame = +2

Query: 422  LGALVVFPLQMIYLVVKAAIGLVLPAKLRDLSRENVLITGGGRGIGRQLAREFAERGARK 601
            L  +++ PL +++ + ++ + L +P K + ++ E VLITG G GIGR  A EFA+    K
Sbjct: 5    LDLILLLPLLIVFSI-ESLVKLFIPKKKKSVAGEIVLITGAGHGIGRLTAYEFAKLNT-K 62

Query: 602  IVLWGRTEKCLKETTEEIRQMGTECHYFICDVGNREEVYQTAKAVREKVGDITILVNNAA 781
            +VLW   +  ++ET  + R++G + H F+ D   REE+Y  AK V+E+VGD++ILVNNA 
Sbjct: 63   LVLWDINKNGIEETAAKCRKLGAQAHPFVVDCSQREEIYSAAKKVKEEVGDVSILVNNAG 122

Query: 782  VVHGKSLMDSDDDALLKSQHINTLGQFWTTKAFLPRMLELQNGHIVCLNSVLALSAIPGA 961
            VV+   L  + D  + K+  +N L  FWTTKAFLP M++  +GHIV + S    + +P  
Sbjct: 123  VVYTADLFATQDPQIEKTFEVNVLAHFWTTKAFLPVMMKNNHGHIVTVASAAGHTVVPFL 182

Query: 962  IDYCTSKASAFAFMESLT--LGLLDCPGVSATTVLPFHTSTEMFQGMRVRFPNLFPPLKP 1135
            + YC+SK +A  F  +LT  L  L   GV  + + P   +T   +       NL P L+P
Sbjct: 183  LAYCSSKFAAVGFHRALTDELAALGRTGVRTSCLCPNFINTGFIKNPST---NLGPTLEP 239

Query: 1136 ETVARKTVEAVQLNQTLLLPPWTMHVLIILKSILPQAALEEI-HRFSGTYTCMNTFKGR 1309
            E V    +  +   + ++  P ++ +L +L+ I+P+  L+ + HR +  +  +  +K +
Sbjct: 240  EEVVEHLMHGILTEKQMIFVPSSIALLTVLERIVPERFLQVLKHRINVKFDAVVGYKDK 298


>ref|NP_932147.2| 17-beta-hydroxysteroid dehydrogenase 13 isoform 2 [Mus musculus].
          Length = 304

 Score =  170 bits (430), Expect = 3e-42
 Identities = 90/261 (34%), Positives = 150/261 (57%), Gaps = 2/261 (0%)
 Frame = +2

Query: 452  MIYLVVKAAIGLVLPAKLRDLSRENVLITGGGRGIGRQLAREFAERGARKIVLWGRTEKC 631
            +IY  +++ +   +P + + ++ + VLITG G GIGR  A EFA++ +R +VLW   ++ 
Sbjct: 14   IIYSYLESLVKFFIPRRRKSVTGQTVLITGAGHGIGRLTAYEFAKQKSR-LVLWDINKRG 72

Query: 632  LKETTEEIRQMGTECHYFICDVGNREEVYQTAKAVREKVGDITILVNNAAVVHGKSLMDS 811
            ++ET ++ R++G   H F+ D  NR E+Y +   V+ +VGD+ I+VNNA  ++   L+ +
Sbjct: 73   VEETADKCRKLGAVVHVFVVDCSNRAEIYNSVDQVKREVGDVEIVVNNAGAIYPADLLSA 132

Query: 812  DDDALLKSQHINTLGQFWTTKAFLPRMLELQNGHIVCLNSVLALSAIPGAIDYCTSKASA 991
             D+ + K+  +N LG FW  KA LP ML   +GHIV + SV     IP  I YC+SK +A
Sbjct: 133  KDEEITKTFEVNILGHFWIIKALLPSMLRRNSGHIVTVASVCGHGVIPYLIPYCSSKFAA 192

Query: 992  FAFMESLT--LGLLDCPGVSATTVLPFHTSTEMFQGMRVRFPNLFPPLKPETVARKTVEA 1165
              F  +LT  L  L   G+  + + P   +T   +    R   L+P L+PE VAR  +  
Sbjct: 193  VGFHRALTAELDTLGKTGIQTSCLCPVFVNTGFTKNPSTR---LWPVLEPEEVARSLING 249

Query: 1166 VQLNQTLLLPPWTMHVLIILK 1228
            +  N+ ++  P  +++ +IL+
Sbjct: 250  ILTNKKMIFVPSYINISLILE 270


>ref|NP_001165583.1| dehydrogenase/reductase SDR family member 7B isoform 1 [Mus
            musculus].
          Length = 314

 Score = 84.0 bits (206), Expect = 2e-16
 Identities = 57/190 (30%), Positives = 94/190 (49%), Gaps = 4/190 (2%)
 Frame = +2

Query: 527  VLITGGGRGIGRQLAREFAERGARKIVLWGRTEKCLKETTEEIR--QMGTECHYFIC--D 694
            V++TG   G+GR+ A+ F   GA K+VL GR  K L+E + E+     G     F+   D
Sbjct: 46   VVVTGATSGLGRECAKVFHAAGA-KLVLCGRNVKALEELSRELAGSSQGQTHQPFVVTFD 104

Query: 695  VGNREEVYQTAKAVREKVGDITILVNNAAVVHGKSLMDSDDDALLKSQHINTLGQFWTTK 874
            + +   +   A  + +  G + +L+NNA + +  ++ D+  D   K   IN  G    TK
Sbjct: 105  LADPGTIAAAAAEILQCFGYVDVLINNAGISYRGTISDTIVDVDRKVMEINYFGPVALTK 164

Query: 875  AFLPRMLELQNGHIVCLNSVLALSAIPGAIDYCTSKASAFAFMESLTLGLLDCPGVSATT 1054
            A LP M+E + GHIV ++S+    +IP    Y  SK +  AF + L   + +   +  T 
Sbjct: 165  ALLPSMVERKQGHIVAISSIQGKISIPFRSAYSASKHATQAFFDCLRAEMEEA-NIKVTV 223

Query: 1055 VLPFHTSTEM 1084
            + P +  T +
Sbjct: 224  ISPGYIHTNL 233


>ref|NP_663403.1| dehydrogenase/reductase SDR family member 7B isoform 2 [Mus
            musculus].
          Length = 323

 Score = 84.0 bits (206), Expect = 2e-16
 Identities = 57/190 (30%), Positives = 94/190 (49%), Gaps = 4/190 (2%)
 Frame = +2

Query: 527  VLITGGGRGIGRQLAREFAERGARKIVLWGRTEKCLKETTEEIR--QMGTECHYFIC--D 694
            V++TG   G+GR+ A+ F   GA K+VL GR  K L+E + E+     G     F+   D
Sbjct: 55   VVVTGATSGLGRECAKVFHAAGA-KLVLCGRNVKALEELSRELAGSSQGQTHQPFVVTFD 113

Query: 695  VGNREEVYQTAKAVREKVGDITILVNNAAVVHGKSLMDSDDDALLKSQHINTLGQFWTTK 874
            + +   +   A  + +  G + +L+NNA + +  ++ D+  D   K   IN  G    TK
Sbjct: 114  LADPGTIAAAAAEILQCFGYVDVLINNAGISYRGTISDTIVDVDRKVMEINYFGPVALTK 173

Query: 875  AFLPRMLELQNGHIVCLNSVLALSAIPGAIDYCTSKASAFAFMESLTLGLLDCPGVSATT 1054
            A LP M+E + GHIV ++S+    +IP    Y  SK +  AF + L   + +   +  T 
Sbjct: 174  ALLPSMVERKQGHIVAISSIQGKISIPFRSAYSASKHATQAFFDCLRAEMEEA-NIKVTV 232

Query: 1055 VLPFHTSTEM 1084
            + P +  T +
Sbjct: 233  ISPGYIHTNL 242


  Database: RefSeq49_MP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 15,617,559
  Number of sequences in database:  30,036
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 30036
Number of Hits to DB: 47,528,354
Number of extensions: 1466888
Number of successful extensions: 7423
Number of sequences better than 1.0e-05: 48
Number of HSP's gapped: 7218
Number of HSP's successfully gapped: 49
Length of query: 440
Length of database: 15,617,559
Length adjustment: 104
Effective length of query: 336
Effective length of database: 12,493,815
Effective search space: 4197921840
Effective search space used: 4197921840
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)

Search to RefSeqHP_Rel49

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-012651
         (1322 letters)

Database: RefSeq49_HP.fasta 
           32,964 sequences; 18,297,164 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_004744.2| short-chain dehydrogenase/reductase 3 [Homo sap...   589   e-168
Alignment   gi|NP_620419.2| epidermal retinol dehydrogenase 2 [Homo sapiens].    189   4e-48
Alignment   gi|NP_742034.1| retinol dehydrogenase 10 [Homo sapiens].             186   5e-47
Alignment   gi|NP_835236.2| 17-beta-hydroxysteroid dehydrogenase 13 isoform...   178   9e-45
Alignment   gi|NP_057329.2| estradiol 17-beta-dehydrogenase 11 [Homo sapien...   173   4e-43
Alignment   gi|NP_001129702.1| 17-beta-hydroxysteroid dehydrogenase 13 isof...   132   7e-31
Alignment   gi|NP_057113.1| dehydrogenase/reductase SDR family member 7 pre...    83   5e-16
Alignment   gi|NP_056325.2| dehydrogenase/reductase SDR family member 7B [H...    79   1e-14
Alignment   gi|NP_116172.2| carbonyl reductase family member 4 [Homo sapien...    75   1e-13
Alignment   gi|NP_066284.2| dehydrogenase/reductase SDR family member 4 [Ho...    68   2e-11

>ref|NP_004744.2| short-chain dehydrogenase/reductase 3 [Homo sapiens].
          Length = 302

 Score =  589 bits (1518), Expect = e-168
 Identities = 293/302 (97%), Positives = 298/302 (98%)
 Frame = +2

Query: 407  MVWKWLGALVVFPLQMIYLVVKAAIGLVLPAKLRDLSRENVLITGGGRGIGRQLAREFAE 586
            MVWK LGALV+FPLQMIYLVVKAA+GLVLPAKLRDLSRENVLITGGGRGIGRQLAREFAE
Sbjct: 1    MVWKRLGALVMFPLQMIYLVVKAAVGLVLPAKLRDLSRENVLITGGGRGIGRQLAREFAE 60

Query: 587  RGARKIVLWGRTEKCLKETTEEIRQMGTECHYFICDVGNREEVYQTAKAVREKVGDITIL 766
            RGARKIVLWGRTEKCLKETTEEIRQMGTECHYFICDVGNREEVYQTAKAVREKVGDITIL
Sbjct: 61   RGARKIVLWGRTEKCLKETTEEIRQMGTECHYFICDVGNREEVYQTAKAVREKVGDITIL 120

Query: 767  VNNAAVVHGKSLMDSDDDALLKSQHINTLGQFWTTKAFLPRMLELQNGHIVCLNSVLALS 946
            VNNAAVVHGKSLMDSDDDALLKSQHINTLGQFWTTKAFLPRMLELQNGHIVCLNSVLALS
Sbjct: 121  VNNAAVVHGKSLMDSDDDALLKSQHINTLGQFWTTKAFLPRMLELQNGHIVCLNSVLALS 180

Query: 947  AIPGAIDYCTSKASAFAFMESLTLGLLDCPGVSATTVLPFHTSTEMFQGMRVRFPNLFPP 1126
            AIPGAIDYCTSKASAFAFMESLTLGLLDCPGVSATTVLPFHTSTEMFQGMRVRFPNLFPP
Sbjct: 181  AIPGAIDYCTSKASAFAFMESLTLGLLDCPGVSATTVLPFHTSTEMFQGMRVRFPNLFPP 240

Query: 1127 LKPETVARKTVEAVQLNQTLLLPPWTMHVLIILKSILPQAALEEIHRFSGTYTCMNTFKG 1306
            LKPETVAR+TVEAVQLNQ LLL PWTMH L+ILKSILPQAALEEIH+FSGTYTCMNTFKG
Sbjct: 241  LKPETVARRTVEAVQLNQALLLLPWTMHALVILKSILPQAALEEIHKFSGTYTCMNTFKG 300

Query: 1307 RT 1312
            RT
Sbjct: 301  RT 302


>ref|NP_620419.2| epidermal retinol dehydrogenase 2 [Homo sapiens].
          Length = 309

 Score =  189 bits (481), Expect = 4e-48
 Identities = 104/273 (38%), Positives = 160/273 (58%), Gaps = 3/273 (1%)
 Frame = +2

Query: 431  LVVFPLQMIYLVVKAAIGLVLPAKLRDLSRENVLITGGGRGIGRQLAREFAERGARKIVL 610
            L +F  + ++ +++A I  +LP   ++++ E VLITG G G+GR LA +FA  G+  +VL
Sbjct: 11   LFIFLGKSLFSLLEAMIFALLPKPRKNVAGEIVLITGAGSGLGRLLALQFARLGS-VLVL 69

Query: 611  WGRTEKCLKETTEEIRQMG-TECHYFICDVGNREEVYQTAKAVREKVGDITILVNNAAVV 787
            W   ++  +ET +  R+ G T  H + CD   +E VY+ A  V+++VGD++IL+NNA +V
Sbjct: 70   WDINKEGNEETCKMAREAGATRVHAYTCDCSQKEGVYRVADQVKKEVGDVSILINNAGIV 129

Query: 788  HGKSLMDSDDDALLKSQHINTLGQFWTTKAFLPRMLELQNGHIVCLNSVLALSAIPGAID 967
             GK  +D  D+ + KS  +N     WT KAFLP M+   +GH+VC++S   LS + G  D
Sbjct: 130  TGKKFLDCPDELMEKSFDVNFKAHLWTYKAFLPAMIANDHGHLVCISSSAGLSGVNGLAD 189

Query: 968  YCTSKASAFAFMESLTLG--LLDCPGVSATTVLPFHTSTEMFQGMRVRFPNLFPPLKPET 1141
            YC SK +AF F ES+ +   +    G+  T V PF   T MF+G     P+L P L+P+ 
Sbjct: 190  YCASKFAAFGFAESVFVETFVQKQKGIKTTIVCPFFIKTGMFEGCTTGCPSLLPILEPKY 249

Query: 1142 VARKTVEAVQLNQTLLLPPWTMHVLIILKSILP 1240
               K VEA+   +  L  P  ++ ++ LKS LP
Sbjct: 250  AVEKIVEAILQEKMYLYMPKLLYFMMFLKSFLP 282


>ref|NP_742034.1| retinol dehydrogenase 10 [Homo sapiens].
          Length = 341

 Score =  186 bits (471), Expect = 5e-47
 Identities = 111/317 (35%), Positives = 169/317 (53%), Gaps = 29/317 (9%)
 Frame = +2

Query: 437  VFPLQMIYLVVKAAIGLVLPAKLRDLSRENVLITGGGRGIGRQLAREFAERGARKIVLWG 616
            V   ++++  V AA   ++  K + ++ +  LITG G G+GR  A EFA R A  +VLW 
Sbjct: 9    VVTFKVLWAFVLAAARWLVRPKEKSVAGQVCLITGAGSGLGRLFALEFARRRAL-LVLWD 67

Query: 617  RTEKCLKETTEEIRQM-------------------------GTECHYFICDVGNREEVYQ 721
               +  +ET   +R +                           +   + CDVG RE VY 
Sbjct: 68   INTQSNEETAGMVRHIYRDLEAADAAALQAGNGEEEILPHCNLQVFTYTCDVGKRENVYL 127

Query: 722  TAKAVREKVGDITILVNNAAVVHGKSLMDSDDDALLKSQHINTLGQFWTTKAFLPRMLEL 901
            TA+ VR++VG++++LVNNA VV G  L++  D+ + ++  +N    FWTTKAFLP MLE+
Sbjct: 128  TAERVRKEVGEVSVLVNNAGVVSGHHLLECPDELIERTMMVNCHAHFWTTKAFLPTMLEI 187

Query: 902  QNGHIVCLNSVLALSAIPGAIDYCTSKASAFAFMESLT--LGLLDCPGVSATTVLPFHTS 1075
             +GHIV + S L L +  G  DYC SK     F ESL+  L   +  G+  T V P+   
Sbjct: 188  NHGHIVTVASSLGLFSTAGVEDYCASKFGVVGFHESLSHELKAAEKDGIKTTLVCPYLVD 247

Query: 1076 TEMFQGMRVR--FPNLFPPLKPETVARKTVEAVQLNQTLLLPPWTMHVLIILKSILPQAA 1249
            T MF+G R+R       PPLKP+   ++ ++A+  +Q ++  P  M+++  +KSILP  A
Sbjct: 248  TGMFRGCRIRKEIEPFLPPLKPDYCVKQAMKAILTDQPMICTPRLMYIVTFMKSILPFEA 307

Query: 1250 LEEIHRFSGTYTCMNTF 1300
            +  ++RF G   CM  F
Sbjct: 308  VVCMYRFLGADKCMYPF 324


>ref|NP_835236.2| 17-beta-hydroxysteroid dehydrogenase 13 isoform A [Homo sapiens].
          Length = 300

 Score =  178 bits (452), Expect = 9e-45
 Identities = 95/281 (33%), Positives = 162/281 (57%), Gaps = 2/281 (0%)
 Frame = +2

Query: 431  LVVFPLQMIYLVVKAAIGLVLPAKLRDLSRENVLITGGGRGIGRQLAREFAERGARKIVL 610
            +++  + +IY  +++ +   +P + + ++ E VLITG G GIGRQ   EFA+R +  +VL
Sbjct: 7    ILLLLITIIYSYLESLVKFFIPQRRKSVAGEIVLITGAGHGIGRQTTYEFAKRQSI-LVL 65

Query: 611  WGRTEKCLKETTEEIRQMGTECHYFICDVGNREEVYQTAKAVREKVGDITILVNNAAVVH 790
            W   ++ ++ET  E R++G   H ++ D  NREE+Y++   V+++VGD+TI+VNNA  V+
Sbjct: 66   WDINKRGVEETAAECRKLGVTAHAYVVDCSNREEIYRSLNQVKKEVGDVTIVVNNAGTVY 125

Query: 791  GKSLMDSDDDALLKSQHINTLGQFWTTKAFLPRMLELQNGHIVCLNSVLALSAIPGAIDY 970
               L+ + D+ + K+  +N LG FW TKA LP M+E  +GHIV + SV     IP  I Y
Sbjct: 126  PADLLSTKDEEITKTFEVNILGHFWITKALLPSMMERNHGHIVTVASVCGHEGIPYLIPY 185

Query: 971  CTSKASAFAFMESLT--LGLLDCPGVSATTVLPFHTSTEMFQGMRVRFPNLFPPLKPETV 1144
            C+SK +A  F   LT  L  L   G+  + + P   +T   +    R   L+P L+ + V
Sbjct: 186  CSSKFAAVGFHRGLTSELQALGKTGIKTSCLCPVFVNTGFTKNPSTR---LWPVLETDEV 242

Query: 1145 ARKTVEAVQLNQTLLLPPWTMHVLIILKSILPQAALEEIHR 1267
             R  ++ +  N+ ++  P  +++ + L+  LP+ A   ++R
Sbjct: 243  VRSLIDGILTNKKMIFVPSYINIFLRLQKFLPERASAILNR 283


>ref|NP_057329.2| estradiol 17-beta-dehydrogenase 11 [Homo sapiens].
          Length = 300

 Score =  173 bits (438), Expect = 4e-43
 Identities = 100/279 (35%), Positives = 159/279 (56%), Gaps = 2/279 (0%)
 Frame = +2

Query: 422  LGALVVFPLQMIYLVVKAAIGLVLPAKLRDLSRENVLITGGGRGIGRQLAREFAERGARK 601
            L  L++ PL +I   +++ + L +P + + ++ E VLITG G GIGR  A EFA+  + K
Sbjct: 5    LDILLLLPL-LIVCSLESFVKLFIPKRRKSVTGEIVLITGAGHGIGRLTAYEFAKLKS-K 62

Query: 602  IVLWGRTEKCLKETTEEIRQMGTECHYFICDVGNREEVYQTAKAVREKVGDITILVNNAA 781
            +VLW   +  L+ET  + + +G + H F+ D  NRE++Y +AK V+ ++GD++ILVNNA 
Sbjct: 63   LVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEIGDVSILVNNAG 122

Query: 782  VVHGKSLMDSDDDALLKSQHINTLGQFWTTKAFLPRMLELQNGHIVCLNSVLALSAIPGA 961
            VV+   L  + D  + K+  +N L  FWTTKAFLP M +  +GHIV + S     ++P  
Sbjct: 123  VVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHVSVPFL 182

Query: 962  IDYCTSKASAFAFMESLT--LGLLDCPGVSATTVLPFHTSTEMFQGMRVRFPNLFPPLKP 1135
            + YC+SK +A  F ++LT  L  L   GV  T + P   +T   +       +L P L+P
Sbjct: 183  LAYCSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIKNPST---SLGPTLEP 239

Query: 1136 ETVARKTVEAVQLNQTLLLPPWTMHVLIILKSILPQAAL 1252
            E V  + +  +   Q ++  P ++  L  L+ ILP+  L
Sbjct: 240  EEVVNRLMHGILTEQKMIFIPSSIAFLTTLERILPERFL 278


>ref|NP_001129702.1| 17-beta-hydroxysteroid dehydrogenase 13 isoform B [Homo sapiens].
          Length = 264

 Score =  132 bits (332), Expect = 7e-31
 Identities = 84/281 (29%), Positives = 141/281 (50%), Gaps = 2/281 (0%)
 Frame = +2

Query: 431  LVVFPLQMIYLVVKAAIGLVLPAKLRDLSRENVLITGGGRGIGRQLAREFAERGARKIVL 610
            +++  + +IY  +++ +   +P + + ++ E VLITG G GIGRQ   EFA+R +  +VL
Sbjct: 7    ILLLLITIIYSYLESLVKFFIPQRRKSVAGEIVLITGAGHGIGRQTTYEFAKRQSI-LVL 65

Query: 611  WGRTEKCLKETTEEIRQMGTECHYFICDVGNREEVYQTAKAVREKVGDITILVNNAAVVH 790
            W                          D+            V+++VGD+TI+VNNA  V+
Sbjct: 66   W--------------------------DINK----------VKKEVGDVTIVVNNAGTVY 89

Query: 791  GKSLMDSDDDALLKSQHINTLGQFWTTKAFLPRMLELQNGHIVCLNSVLALSAIPGAIDY 970
               L+ + D+ + K+  +N LG FW TKA LP M+E  +GHIV + SV     IP  I Y
Sbjct: 90   PADLLSTKDEEITKTFEVNILGHFWITKALLPSMMERNHGHIVTVASVCGHEGIPYLIPY 149

Query: 971  CTSKASAFAFMESLT--LGLLDCPGVSATTVLPFHTSTEMFQGMRVRFPNLFPPLKPETV 1144
            C+SK +A  F   LT  L  L   G+  + + P   +T   +    R   L+P L+ + V
Sbjct: 150  CSSKFAAVGFHRGLTSELQALGKTGIKTSCLCPVFVNTGFTKNPSTR---LWPVLETDEV 206

Query: 1145 ARKTVEAVQLNQTLLLPPWTMHVLIILKSILPQAALEEIHR 1267
             R  ++ +  N+ ++  P  +++ + L+  LP+ A   ++R
Sbjct: 207  VRSLIDGILTNKKMIFVPSYINIFLRLQKFLPERASAILNR 247


>ref|NP_057113.1| dehydrogenase/reductase SDR family member 7 precursor [Homo sapiens].
          Length = 339

 Score = 83.2 bits (204), Expect = 5e-16
 Identities = 59/186 (31%), Positives = 85/186 (45%), Gaps = 7/186 (3%)
 Frame = +2

Query: 527  VLITGGGRGIGRQLAREFAERGARKIVLWGRTEKCLKETTEEIRQMGTECHYFIC----- 691
            V +TG   GIG +LA + ++ G   +VL  R    L+       + G      I      
Sbjct: 53   VWVTGASSGIGEELAYQLSKLGV-SLVLSARRVHELERVKRRCLENGNLKEKDILVLPLD 111

Query: 692  --DVGNREEVYQTAKAVREKVGDITILVNNAAVVHGKSLMDSDDDALLKSQHINTLGQFW 865
              D G+ E      KAV ++ G I ILVNN  +      MD+  D   K   +N LG   
Sbjct: 112  LTDTGSHEAA---TKAVLQEFGRIDILVNNGGMSQRSLCMDTSLDVYRKLIELNYLGTVS 168

Query: 866  TTKAFLPRMLELQNGHIVCLNSVLALSAIPGAIDYCTSKASAFAFMESLTLGLLDCPGVS 1045
             TK  LP M+E + G IV +NS+L + ++P +I YC SK +   F   L   L   PG+ 
Sbjct: 169  LTKCVLPHMIERKQGKIVTVNSILGIISVPLSIGYCASKHALRGFFNGLRTELATYPGII 228

Query: 1046 ATTVLP 1063
             + + P
Sbjct: 229  VSNICP 234


>ref|NP_056325.2| dehydrogenase/reductase SDR family member 7B [Homo sapiens].
          Length = 325

 Score = 78.6 bits (192), Expect = 1e-14
 Identities = 53/168 (31%), Positives = 85/168 (50%), Gaps = 6/168 (3%)
 Frame = +2

Query: 527  VLITGGGRGIGRQLAREFAERGARKIVLWGRTEKCLKETTEEIR-----QMGTECHYFIC 691
            V+ITG   G+G++ A+ F   GA K+VL GR    L+E   E+      ++ T   Y + 
Sbjct: 55   VVITGATSGLGKECAKVFYAAGA-KLVLCGRNGGALEELIRELTASHATKVQTHKPYLVT 113

Query: 692  -DVGNREEVYQTAKAVREKVGDITILVNNAAVVHGKSLMDSDDDALLKSQHINTLGQFWT 868
             D+ +   +   A  + +  G + ILVNNA + +  ++MD+  D   +    N  G    
Sbjct: 114  FDLTDSGAIVAAAAEILQCFGYVDILVNNAGISYRGTIMDTTVDVDKRVMETNYFGPVAL 173

Query: 869  TKAFLPRMLELQNGHIVCLNSVLALSAIPGAIDYCTSKASAFAFMESL 1012
            TKA LP M++ + GHIV ++S+    +IP    Y  SK +  AF + L
Sbjct: 174  TKALLPSMIKRRQGHIVAISSIQGKMSIPFRSAYAASKHATQAFFDCL 221


>ref|NP_116172.2| carbonyl reductase family member 4 [Homo sapiens].
          Length = 237

 Score = 75.1 bits (183), Expect = 1e-13
 Identities = 61/231 (26%), Positives = 100/231 (43%), Gaps = 1/231 (0%)
 Frame = +2

Query: 533  ITGGGRGIGRQLAREFAERGARKIVLWGRTEKCLKETTEEIRQMGTECHYFICDVGNREE 712
            + GG RGIGR +A+  A +G R  V+     + L+        +G +   F CDV    +
Sbjct: 7    VFGGSRGIGRAVAQLMARKGYRLAVI----ARNLEGAKAAAGDLGGDHLAFSCDVAKEHD 62

Query: 713  VYQTAKAVREKVGDITILVNNAAVVHGKSLMDSDDDALLKSQHINTLGQFWTTKAFLPRM 892
            V  T + + + +G +  LVN A +     L+ +  + ++   H N LG   T KA +  M
Sbjct: 63   VQNTFEELEKHLGRVNFLVNAAGINRDGLLVRTKTEDMVSQLHTNLLGSMLTCKAAMRTM 122

Query: 893  LELQNGHIVCLNSVLALSAIPGAIDYCTSKASAFAFMESLTLGLLDCPGVSATTVLPFHT 1072
            ++ Q G IV + S++ L    G   Y  SK     F  +L   +     +    V P   
Sbjct: 123  IQQQGGSIVNVGSIVGLKGNSGQSVYSASKGGLVGFSRALAKEVAR-KKIRVNVVAPGFV 181

Query: 1073 STEMFQGMRVRFPNLFPPLKPETVARKTVEAVQLNQTLLLPPW-TMHVLII 1222
             T+M + ++        PL       +T+E       LL  P+ T HVL++
Sbjct: 182  HTDMTKDLKEEHLKKNIPLGR---FGETIEVAHAVVFLLESPYITGHVLVV 229


>ref|NP_066284.2| dehydrogenase/reductase SDR family member 4 [Homo sapiens].
          Length = 278

 Score = 68.2 bits (165), Expect = 2e-11
 Identities = 50/172 (29%), Positives = 82/172 (47%), Gaps = 1/172 (0%)
 Frame = +2

Query: 512  LSRENVLITGGGRGIGRQLAREFAERGARKIVLWGRTEKCLKETTEEIRQMGTECHYFIC 691
            L+ +  L+T    GIG  +AR  A+ GA  +V+  R ++ + +    ++  G      +C
Sbjct: 30   LANKVALVTASTDGIGFAIARRLAQDGAH-VVVSSRKQQNVDQAVATLQGEGLSVTGTVC 88

Query: 692  DVGNREEVYQTAKAVREKVGDITILVNNAAV-VHGKSLMDSDDDALLKSQHINTLGQFWT 868
             VG  E+  +      +  G I ILV+NAAV     S+MD  ++   K+  IN       
Sbjct: 89   HVGKAEDRERLVATAVKLHGGIDILVSNAAVNPFFGSIMDVTEEVWDKTLDINVKAPALM 148

Query: 869  TKAFLPRMLELQNGHIVCLNSVLALSAIPGAIDYCTSKASAFAFMESLTLGL 1024
            TKA +P M +   G +V ++S+ A S  PG   Y  SK +     ++L + L
Sbjct: 149  TKAVVPEMEKRGGGSVVIVSSIAAFSPSPGFSPYNVSKTALLGLTKTLAIEL 200


  Database: RefSeq49_HP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 18,297,164
  Number of sequences in database:  32,964
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 32964
Number of Hits to DB: 56,577,333
Number of extensions: 1779021
Number of successful extensions: 9113
Number of sequences better than 1.0e-05: 39
Number of HSP's gapped: 8928
Number of HSP's successfully gapped: 39
Length of query: 440
Length of database: 18,297,164
Length adjustment: 106
Effective length of query: 334
Effective length of database: 14,802,980
Effective search space: 4944195320
Effective search space used: 4944195320
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)

Search to Sscrofa10_2

BLASTN 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-012651
         (1322 letters)

Database: Sscrofa_10.2.fasta 
           4582 sequences; 2,808,509,378 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Sscrofa_Chr06                                                         480   e-132

>Sscrofa_Chr06 
||          Length = 157765593

 Score =  480 bits (242), Expect = e-132
 Identities = 242/242 (100%)
 Strand = Plus / Minus

                                                                            
Query: 865      gaccaccaaggccttcttgccgcggatgctggagctgcagaacggccacatcgtgtgtct 924
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 66693905 gaccaccaaggccttcttgccgcggatgctggagctgcagaacggccacatcgtgtgtct 66693846

                                                                            
Query: 925      caactccgtgctggcgctttctgccatccccggtgccatcgactactgcacgtccaaggc 984
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 66693845 caactccgtgctggcgctttctgccatccccggtgccatcgactactgcacgtccaaggc 66693786

                                                                            
Query: 985      ctcagccttcgccttcatggagagcctgaccctggggctgctggactgtccgggggtcag 1044
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 66693785 ctcagccttcgccttcatggagagcctgaccctggggctgctggactgtccgggggtcag 66693726

                                                                            
Query: 1045     cgccaccaccgtgctgcctttccacaccagcaccgagatgtttcagggcatgagggtcag 1104
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 66693725 cgccaccaccgtgctgcctttccacaccagcaccgagatgtttcagggcatgagggtcag 66693666

                  
Query: 1105     gt 1106
                ||
Sbjct: 66693665 gt 66693664



 Score =  295 bits (149), Expect = 3e-77
 Identities = 149/149 (100%)
 Strand = Plus / Minus

                                                                            
Query: 600      agattgttctctggggccggactgagaaatgcctgaaggagacgacggaggagattcggc 659
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 66695504 agattgttctctggggccggactgagaaatgcctgaaggagacgacggaggagattcggc 66695445

                                                                            
Query: 660      agatgggcaccgagtgccactacttcatctgcgacgtgggcaaccgggaagaggtgtacc 719
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 66695444 agatgggcaccgagtgccactacttcatctgcgacgtgggcaaccgggaagaggtgtacc 66695385

                                             
Query: 720      agacggccaaagctgtccgggagaaggtg 748
                |||||||||||||||||||||||||||||
Sbjct: 66695384 agacggccaaagctgtccgggagaaggtg 66695356



 Score =  242 bits (122), Expect = 4e-61
 Identities = 122/122 (100%)
 Strand = Plus / Minus

                                                                            
Query: 744      aggtgggtgacatcaccatcctggtgaacaatgccgctgtggtccatgggaagagtctga 803
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 66694386 aggtgggtgacatcaccatcctggtgaacaatgccgctgtggtccatgggaagagtctga 66694327

                                                                            
Query: 804      tggacagtgatgacgatgcccttctcaagtcccagcatatcaacaccctgggccagttct 863
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 66694326 tggacagtgatgacgatgcccttctcaagtcccagcatatcaacaccctgggccagttct 66694267

                  
Query: 864      gg 865
                ||
Sbjct: 66694266 gg 66694265



 Score =  190 bits (96), Expect = 1e-45
 Identities = 119/129 (92%)
 Strand = Plus / Minus

                                                                            
Query: 1102     caggttccccaacctctttnnnnnnntgaagccggagacggtggcccggaagacggtgga 1161
                |||||||||||||||||||       |||||||||||||||||||||||| |||||||||
Sbjct: 66688765 caggttccccaacctctttccccccctgaagccggagacggtggcccggaggacggtgga 66688706

                                                                            
Query: 1162     agccgtgcagctcaatcagaccctcctcctgcctccgtggaccatgcatgtcctcattat 1221
                ||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||
Sbjct: 66688705 agccgtgcagctcaatcagaccctcctcctgctcccgtggaccatgcatgtcctcattat 66688646

                         
Query: 1222     cttgaaaag 1230
                |||||||||
Sbjct: 66688645 cttgaaaag 66688637



 Score =  178 bits (90), Expect = 5e-42
 Identities = 93/94 (98%)
 Strand = Plus / Minus

                                                                            
Query: 1229     agcatactcccacaggctgccctcgaggagatccacagattctcaggaacctacacctgc 1288
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 66685735 agcatactcccacaggctgccctcgaggagatccacagattctcaggaacctacacctgc 66685676

                                                  
Query: 1289     atgaacactttcaaggggcgcacctaaaagcagg 1322
                |||||||||||||| |||||||||||||||||||
Sbjct: 66685675 atgaacactttcaaagggcgcacctaaaagcagg 66685642


  Database: Sscrofa_10.2.fasta
    Posted date:  Nov 16, 2011 10:34 AM
  Number of letters in database: 2,808,509,378
  Number of sequences in database:  4582
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4582
Number of Hits to DB: 33,557,982
Number of extensions: 161
Number of successful extensions: 161
Number of sequences better than 1.0e-05: 1
Number of HSP's gapped: 161
Number of HSP's successfully gapped: 5
Length of query: 1322
Length of database: 2,808,509,378
Length adjustment: 21
Effective length of query: 1301
Effective length of database: 2,808,413,156
Effective search space: 3653745515956
Effective search space used: 3653745515956
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 18 (36.2 bits)
S2: 30 (60.0 bits)