Search to RefSeqCP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-012680
(1649 letters)
Database: RefSeq49_CP.fasta
33,336 sequences; 18,874,504 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_544495.1| PREDICTED: similar to Calcipressin-3 (Down synd... 356 4e-98
Alignment gi|XP_852304.1| PREDICTED: similar to Down syndrome critical re... 245 1e-64
Alignment gi|XP_858324.1| PREDICTED: similar to calcipressin 1 isoform c ... 226 5e-59
Alignment gi|XP_858247.1| PREDICTED: similar to calcipressin 1 isoform c ... 224 2e-58
Alignment gi|XP_858165.1| PREDICTED: similar to calcipressin 1 isoform c ... 223 5e-58
Alignment gi|XP_858201.1| PREDICTED: similar to calcipressin 1 isoform c ... 219 6e-57
Alignment gi|XP_858365.1| PREDICTED: similar to calcipressin 1 isoform c ... 218 2e-56
Alignment gi|XP_858285.1| PREDICTED: similar to calcipressin 1 isoform c ... 216 5e-56
Alignment gi|XP_858126.1| PREDICTED: similar to calcipressin 1 isoform c ... 216 5e-56
Alignment gi|XP_849295.1| PREDICTED: similar to calcipressin 1 isoform a ... 210 3e-54
>ref|XP_544495.1| PREDICTED: similar to Calcipressin-3 (Down syndrome candidate region
1-like protein 2) (Myocyte-enriched calcineurin
interacting protein 3) (MCIP3) isoform 1 [Canis
familiaris].
Length = 241
Score = 356 bits (913), Expect = 4e-98
Identities = 185/241 (76%), Positives = 192/241 (79%), Gaps = 1/241 (0%)
Frame = +1
Query: 349 VLRDTMKXXXXXXXXXXXXXXXXXX-MIFGXXXXXXXXXXXXXXXPTSLFACSVHEAVFE 525
+LRDTMK M+FG PTSLFACSVHEAVFE
Sbjct: 1 MLRDTMKSWNDSQSDLCSSDQEEEEEMVFGENEDDLEEMMDFSDLPTSLFACSVHEAVFE 60
Query: 526 VQEQKERFEALFTIYDDQVTFQLFKSFRRVRINFSKPEAAARARIELHETDFNGKKLKLY 705
VQEQKERFEALFT+YDDQVTFQLFKSFRRVRINFSKPEAAARARIEL+ETDFNGKKLKLY
Sbjct: 61 VQEQKERFEALFTVYDDQVTFQLFKSFRRVRINFSKPEAAARARIELNETDFNGKKLKLY 120
Query: 706 FAQVQVSSETRDRSYLLPPQPVKQFLISPPASPPVGWKQGEDAMPVINYDLLCAVSKLGP 885
FAQVQ+SSETRD+SYLLPPQPVKQFLISPPASPPVGWKQGEDAMPVINYDLLCAVSKLGP
Sbjct: 121 FAQVQMSSETRDKSYLLPPQPVKQFLISPPASPPVGWKQGEDAMPVINYDLLCAVSKLGP 180
Query: 886 GEKYELHAGTESTPSVVVHVCXXXXXXXXXXXXPKQKITQTRRPEPPPAALSEPRAFDCA 1065
GEKYELHAGTESTPSVVVHVC PKQKITQTRRPEPP AALSEP+ FD A
Sbjct: 181 GEKYELHAGTESTPSVVVHVCESETEEEEETKNPKQKITQTRRPEPPAAALSEPQNFDGA 240
Query: 1066 L 1068
L
Sbjct: 241 L 241
>ref|XP_852304.1| PREDICTED: similar to Down syndrome critical region gene 1-like 1
isoform 2 [Canis familiaris].
Length = 192
Score = 245 bits (625), Expect = 1e-64
Identities = 127/184 (69%), Positives = 138/184 (75%), Gaps = 1/184 (0%)
Frame = +1
Query: 484 TSLFACSVHEAVFEVQEQKERFEALFTIYDDQVTFQLFKSFRRVRINFSKPEAAARARIE 663
++L AC V VF QE KE+FE LF YDD VTFQLFKSFRRVRINFS P++AARARIE
Sbjct: 6 STLVACVVDVEVFTNQEVKEKFEGLFRTYDDCVTFQLFKSFRRVRINFSNPKSAARARIE 65
Query: 664 LHETDFNGKKLKLYFAQVQVSSETRDRSYLLPPQPVKQFLISPPASPPVGWKQGEDAMPV 843
LHET F GKKLKLYFAQVQ D+ +L PPQP KQFLISPPASPPVGW+ DA PV
Sbjct: 66 LHETQFRGKKLKLYFAQVQTPETDGDKLHLAPPQPAKQFLISPPASPPVGWQPISDATPV 125
Query: 844 INYDLLCAVSKLGPGEKYELHAGTESTPSVVVHVC-XXXXXXXXXXXXPKQKITQTRRPE 1020
+NYDLL AV+KLGPGEKYELHAGTESTPSVVVHVC PK KI QTRRP
Sbjct: 126 LNYDLLYAVAKLGPGEKYELHAGTESTPSVVVHVCDSDIEEEEDPKTSPKPKIIQTRRPG 185
Query: 1021 PPPA 1032
PP+
Sbjct: 186 LPPS 189
>ref|XP_858324.1| PREDICTED: similar to calcipressin 1 isoform c isoform 7 [Canis
familiaris].
Length = 201
Score = 226 bits (576), Expect = 5e-59
Identities = 115/191 (60%), Positives = 136/191 (71%), Gaps = 5/191 (2%)
Frame = +1
Query: 484 TSLFACSVHEAVFEVQEQKERFEALFTIYDDQVTFQLFKSFRRVRINFSKPEAAARARIE 663
+SL AC + +F E + +FE+LF YD +TFQ FKSF+RVRINFS P +AA AR++
Sbjct: 11 SSLIACVANSDIFSESETRAKFESLFRTYDKDITFQYFKSFKRVRINFSNPLSAADARLQ 70
Query: 664 LHETDFNGKKLKLYFAQVQVSSETRDRSYLLPPQPVKQFLISPPASPPVGWKQGEDAMPV 843
LH+T+F GK++KLYFAQV++ R S+L PP P KQFLISPPASPPVGWKQ EDA PV
Sbjct: 71 LHKTEFLGKEMKLYFAQVRLPGALRGSSHLAPPNPDKQFLISPPASPPVGWKQVEDATPV 130
Query: 844 INYDLLCAVSKLGPGEKYELHAGTESTPSVVVHVC-----XXXXXXXXXXXXPKQKITQT 1008
INYDLL A+SKLGPGEKYELHA T++TPSVVVHVC PK KI QT
Sbjct: 131 INYDLLYAISKLGPGEKYELHAATDTTPSVVVHVCESDQENEEDDEAERMKRPKPKIIQT 190
Query: 1009 RRPEPPPAALS 1041
RRPE P LS
Sbjct: 191 RRPEYAPLHLS 201
>ref|XP_858247.1| PREDICTED: similar to calcipressin 1 isoform c isoform 5 [Canis
familiaris].
Length = 201
Score = 224 bits (570), Expect = 2e-58
Identities = 115/191 (60%), Positives = 135/191 (70%), Gaps = 5/191 (2%)
Frame = +1
Query: 484 TSLFACSVHEAVFEVQEQKERFEALFTIYDDQVTFQLFKSFRRVRINFSKPEAAARARIE 663
+SL AC + +F E + +FE+LF YD +TFQ FKSF+RVRINFS P +AA AR++
Sbjct: 11 SSLIACVANSDIFSESETRAKFESLFRTYDKDITFQYFKSFKRVRINFSNPLSAADARLQ 70
Query: 664 LHETDFNGKKLKLYFAQVQVSSETRDRSYLLPPQPVKQFLISPPASPPVGWKQGEDAMPV 843
LH+T+F GK++KLYFAQV+ D S+L PP P KQFLISPPASPPVGWKQ EDA PV
Sbjct: 71 LHKTEFLGKEMKLYFAQVRNCGVPLDGSHLAPPNPDKQFLISPPASPPVGWKQVEDATPV 130
Query: 844 INYDLLCAVSKLGPGEKYELHAGTESTPSVVVHVC-----XXXXXXXXXXXXPKQKITQT 1008
INYDLL A+SKLGPGEKYELHA T++TPSVVVHVC PK KI QT
Sbjct: 131 INYDLLYAISKLGPGEKYELHAATDTTPSVVVHVCESDQENEEDDEAERMKRPKPKIIQT 190
Query: 1009 RRPEPPPAALS 1041
RRPE P LS
Sbjct: 191 RRPEYAPLHLS 201
>ref|XP_858165.1| PREDICTED: similar to calcipressin 1 isoform c isoform 3 [Canis
familiaris].
Length = 201
Score = 223 bits (567), Expect = 5e-58
Identities = 114/191 (59%), Positives = 134/191 (70%), Gaps = 5/191 (2%)
Frame = +1
Query: 484 TSLFACSVHEAVFEVQEQKERFEALFTIYDDQVTFQLFKSFRRVRINFSKPEAAARARIE 663
+SL AC + +F E + +FE+LF YD +TFQ FKSF+RVRINFS P +AA AR++
Sbjct: 11 SSLIACVANSDIFSESETRAKFESLFRTYDKDITFQYFKSFKRVRINFSNPLSAADARLQ 70
Query: 664 LHETDFNGKKLKLYFAQVQVSSETRDRSYLLPPQPVKQFLISPPASPPVGWKQGEDAMPV 843
LH+T+F GK++KLYFAQV+ S+L PP P KQFLISPPASPPVGWKQ EDA PV
Sbjct: 71 LHKTEFLGKEMKLYFAQVRPGDHDPRSSHLAPPNPDKQFLISPPASPPVGWKQVEDATPV 130
Query: 844 INYDLLCAVSKLGPGEKYELHAGTESTPSVVVHVC-----XXXXXXXXXXXXPKQKITQT 1008
INYDLL A+SKLGPGEKYELHA T++TPSVVVHVC PK KI QT
Sbjct: 131 INYDLLYAISKLGPGEKYELHAATDTTPSVVVHVCESDQENEEDDEAERMKRPKPKIIQT 190
Query: 1009 RRPEPPPAALS 1041
RRPE P LS
Sbjct: 191 RRPEYAPLHLS 201
>ref|XP_858201.1| PREDICTED: similar to calcipressin 1 isoform c isoform 4 [Canis
familiaris].
Length = 202
Score = 219 bits (558), Expect = 6e-57
Identities = 115/192 (59%), Positives = 134/192 (69%), Gaps = 6/192 (3%)
Frame = +1
Query: 484 TSLFACSVHEAVFEVQEQKERFEALFTIYDDQVTFQLFKSFRRVRINFSKPEAAARARIE 663
+SL AC + +F E + +FE+LF YD +TFQ FKSF+RVRINFS P +AA AR++
Sbjct: 11 SSLIACVANSDIFSESETRAKFESLFRTYDKDITFQYFKSFKRVRINFSNPLSAADARLQ 70
Query: 664 LHETDFNGKKLKLYFAQVQVS-SETRDRSYLLPPQPVKQFLISPPASPPVGWKQGEDAMP 840
LH+T+F GK++KLYFAQV S S+L PP P KQFLISPPASPPVGWKQ EDA P
Sbjct: 71 LHKTEFLGKEMKLYFAQVSDPLSRQLTNSHLAPPNPDKQFLISPPASPPVGWKQVEDATP 130
Query: 841 VINYDLLCAVSKLGPGEKYELHAGTESTPSVVVHVC-----XXXXXXXXXXXXPKQKITQ 1005
VINYDLL A+SKLGPGEKYELHA T++TPSVVVHVC PK KI Q
Sbjct: 131 VINYDLLYAISKLGPGEKYELHAATDTTPSVVVHVCESDQENEEDDEAERMKRPKPKIIQ 190
Query: 1006 TRRPEPPPAALS 1041
TRRPE P LS
Sbjct: 191 TRRPEYAPLHLS 202
>ref|XP_858365.1| PREDICTED: similar to calcipressin 1 isoform c isoform 8 [Canis
familiaris].
Length = 209
Score = 218 bits (554), Expect = 2e-56
Identities = 115/199 (57%), Positives = 136/199 (68%), Gaps = 13/199 (6%)
Frame = +1
Query: 484 TSLFACSVHEAVFEVQEQKERFEALFTIYDDQVTFQLFKSFRRVRINFSKPEAAARARIE 663
+SL AC + +F E + +FE+LF YD +TFQ FKSF+RVRINFS P +AA AR++
Sbjct: 11 SSLIACVANSDIFSESETRAKFESLFRTYDKDITFQYFKSFKRVRINFSNPLSAADARLQ 70
Query: 664 LHETDFNGKKLKLYFAQVQVSSETR--------DRSYLLPPQPVKQFLISPPASPPVGWK 819
LH+T+F GK++KLYFAQV+ S+ S+L PP P KQFLISPPASPPVGWK
Sbjct: 71 LHKTEFLGKEMKLYFAQVKTSTCVSFSPQTLHIGSSHLAPPNPDKQFLISPPASPPVGWK 130
Query: 820 QGEDAMPVINYDLLCAVSKLGPGEKYELHAGTESTPSVVVHVC-----XXXXXXXXXXXX 984
Q EDA PVINYDLL A+SKLGPGEKYELHA T++TPSVVVHVC
Sbjct: 131 QVEDATPVINYDLLYAISKLGPGEKYELHAATDTTPSVVVHVCESDQENEEDDEAERMKR 190
Query: 985 PKQKITQTRRPEPPPAALS 1041
PK KI QTRRPE P LS
Sbjct: 191 PKPKIIQTRRPEYAPLHLS 209
>ref|XP_858285.1| PREDICTED: similar to calcipressin 1 isoform c isoform 6 [Canis
familiaris].
Length = 198
Score = 216 bits (550), Expect = 5e-56
Identities = 113/191 (59%), Positives = 134/191 (70%), Gaps = 5/191 (2%)
Frame = +1
Query: 484 TSLFACSVHEAVFEVQEQKERFEALFTIYDDQVTFQLFKSFRRVRINFSKPEAAARARIE 663
+SL AC + +F E + +FE+LF YD +TFQ FKSF+RVRINFS P +AA AR++
Sbjct: 11 SSLIACVANSDIFSESETRAKFESLFRTYDKDITFQYFKSFKRVRINFSNPLSAADARLQ 70
Query: 664 LHETDFNGKKLKLYFAQVQVSSETRDRSYLLPPQPVKQFLISPPASPPVGWKQGEDAMPV 843
LH+T+F GK++KLYFAQ + + S+L PP P KQFLISPPASPPVGWKQ EDA PV
Sbjct: 71 LHKTEFLGKEMKLYFAQPTLHIGS---SHLAPPNPDKQFLISPPASPPVGWKQVEDATPV 127
Query: 844 INYDLLCAVSKLGPGEKYELHAGTESTPSVVVHVC-----XXXXXXXXXXXXPKQKITQT 1008
INYDLL A+SKLGPGEKYELHA T++TPSVVVHVC PK KI QT
Sbjct: 128 INYDLLYAISKLGPGEKYELHAATDTTPSVVVHVCESDQENEEDDEAERMKRPKPKIIQT 187
Query: 1009 RRPEPPPAALS 1041
RRPE P LS
Sbjct: 188 RRPEYAPLHLS 198
>ref|XP_858126.1| PREDICTED: similar to calcipressin 1 isoform c isoform 2 [Canis
familiaris].
Length = 197
Score = 216 bits (550), Expect = 5e-56
Identities = 114/192 (59%), Positives = 135/192 (70%), Gaps = 6/192 (3%)
Frame = +1
Query: 484 TSLFACSVHEAVFEVQEQKERFEALFTIYDDQVTFQLFKSFRRVRINFSKPEAAARARIE 663
+SL AC + +F E + +FE+LF YD +TFQ FKSF+RVRINFS P +AA AR++
Sbjct: 11 SSLIACVANSDIFSESETRAKFESLFRTYDKDITFQYFKSFKRVRINFSNPLSAADARLQ 70
Query: 664 LHETDFNGKKLKLYFAQ-VQVSSETRDRSYLLPPQPVKQFLISPPASPPVGWKQGEDAMP 840
LH+T+F GK++KLYFAQ + + S S+L PP P KQFLISPPASPPVGWKQ EDA P
Sbjct: 71 LHKTEFLGKEMKLYFAQTLHIGS-----SHLAPPNPDKQFLISPPASPPVGWKQVEDATP 125
Query: 841 VINYDLLCAVSKLGPGEKYELHAGTESTPSVVVHVC-----XXXXXXXXXXXXPKQKITQ 1005
VINYDLL A+SKLGPGEKYELHA T++TPSVVVHVC PK KI Q
Sbjct: 126 VINYDLLYAISKLGPGEKYELHAATDTTPSVVVHVCESDQENEEDDEAERMKRPKPKIIQ 185
Query: 1006 TRRPEPPPAALS 1041
TRRPE P LS
Sbjct: 186 TRRPEYAPLHLS 197
>ref|XP_849295.1| PREDICTED: similar to calcipressin 1 isoform a isoform 1 [Canis
familiaris].
Length = 249
Score = 210 bits (535), Expect = 3e-54
Identities = 113/193 (58%), Positives = 134/193 (69%), Gaps = 6/193 (3%)
Frame = +1
Query: 481 PTSLFACSVHEAVFEVQEQKERFEALFTIYDDQVTFQLFKSFRRVRINFSKPEAAARARI 660
P++ AC + VF + +FE+LF YD +TFQ FKSF+RVRINFS P +AA AR+
Sbjct: 62 PSATIACHLDPRVFVDGLCRAKFESLFRTYDKDITFQYFKSFKRVRINFSNPLSAADARL 121
Query: 661 ELHETDFNGKKLKLYFAQ-VQVSSETRDRSYLLPPQPVKQFLISPPASPPVGWKQGEDAM 837
+LH+T+F GK++KLYFAQ + + S S+L PP P KQFLISPPASPPVGWKQ EDA
Sbjct: 122 QLHKTEFLGKEMKLYFAQTLHIGS-----SHLAPPNPDKQFLISPPASPPVGWKQVEDAT 176
Query: 838 PVINYDLLCAVSKLGPGEKYELHAGTESTPSVVVHVC-----XXXXXXXXXXXXPKQKIT 1002
PVINYDLL A+SKLGPGEKYELHA T++TPSVVVHVC PK KI
Sbjct: 177 PVINYDLLYAISKLGPGEKYELHAATDTTPSVVVHVCESDQENEEDDEAERMKRPKPKII 236
Query: 1003 QTRRPEPPPAALS 1041
QTRRPE P LS
Sbjct: 237 QTRRPEYAPLHLS 249
Database: RefSeq49_CP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,874,504
Number of sequences in database: 33,336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33336
Number of Hits to DB: 53,071,024
Number of extensions: 1507557
Number of successful extensions: 6623
Number of sequences better than 1.0e-05: 11
Number of HSP's gapped: 6593
Number of HSP's successfully gapped: 12
Length of query: 549
Length of database: 18,874,504
Length adjustment: 108
Effective length of query: 441
Effective length of database: 15,274,216
Effective search space: 6735929256
Effective search space used: 6735929256
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Animal-Genome cDNA 20110601C-012680
Search to RefSeqBP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-012680
(1649 letters)
Database: RefSeq49_BP.fasta
33,088 sequences; 17,681,374 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001039410.1| calcipressin-3 [Bos taurus]. 351 9e-97
Alignment gi|NP_001015632.1| calcipressin-2 [Bos taurus]. 249 7e-66
Alignment gi|NP_001029851.1| calcipressin-1 [Bos taurus]. 216 4e-56
>ref|NP_001039410.1| calcipressin-3 [Bos taurus].
Length = 241
Score = 351 bits (901), Expect = 9e-97
Identities = 176/215 (81%), Positives = 180/215 (83%)
Frame = +1
Query: 424 MIFGXXXXXXXXXXXXXXXPTSLFACSVHEAVFEVQEQKERFEALFTIYDDQVTFQLFKS 603
M+FG PTSLFAC VHEAVFEV EQKERFEALFTIYDDQVTFQLFKS
Sbjct: 27 MVFGENEDDLEEMMDLSDLPTSLFACRVHEAVFEVPEQKERFEALFTIYDDQVTFQLFKS 86
Query: 604 FRRVRINFSKPEAAARARIELHETDFNGKKLKLYFAQVQVSSETRDRSYLLPPQPVKQFL 783
FRRVRINFSKPEAAARARIELHETDFNG+KLKLYFAQVQ+S ETRD+SYL PPQP KQFL
Sbjct: 87 FRRVRINFSKPEAAARARIELHETDFNGRKLKLYFAQVQMSGETRDKSYLQPPQPAKQFL 146
Query: 784 ISPPASPPVGWKQGEDAMPVINYDLLCAVSKLGPGEKYELHAGTESTPSVVVHVCXXXXX 963
ISPPASPPVGWKQG DA PVINYDLLCAVSKLGPGEKYELHAGTESTPSVVVHVC
Sbjct: 147 ISPPASPPVGWKQGGDATPVINYDLLCAVSKLGPGEKYELHAGTESTPSVVVHVCESETE 206
Query: 964 XXXXXXXPKQKITQTRRPEPPPAALSEPRAFDCAL 1068
PKQKITQTRRPEPP AALSEPRAFDCAL
Sbjct: 207 EEEETKNPKQKITQTRRPEPPTAALSEPRAFDCAL 241
>ref|NP_001015632.1| calcipressin-2 [Bos taurus].
Length = 197
Score = 249 bits (635), Expect = 7e-66
Identities = 128/184 (69%), Positives = 139/184 (75%), Gaps = 1/184 (0%)
Frame = +1
Query: 484 TSLFACSVHEAVFEVQEQKERFEALFTIYDDQVTFQLFKSFRRVRINFSKPEAAARARIE 663
++L AC V VF QE KE+FE LF YDD VTFQLFKSFRRVRINFS P++AARARIE
Sbjct: 11 STLVACVVDVEVFTNQEVKEKFEGLFRTYDDCVTFQLFKSFRRVRINFSNPKSAARARIE 70
Query: 664 LHETDFNGKKLKLYFAQVQVSSETRDRSYLLPPQPVKQFLISPPASPPVGWKQGEDAMPV 843
LHET F GKKLKLYFAQVQ D+ +L PPQP KQFLISPPASPPVGW+ DA PV
Sbjct: 71 LHETQFRGKKLKLYFAQVQTPETDGDKLHLAPPQPAKQFLISPPASPPVGWQPISDATPV 130
Query: 844 INYDLLCAVSKLGPGEKYELHAGTESTPSVVVHVC-XXXXXXXXXXXXPKQKITQTRRPE 1020
+NYDLL AV+KLGPGEKYELHAGTESTPSVVVHVC PK KI QTRRP
Sbjct: 131 LNYDLLYAVAKLGPGEKYELHAGTESTPSVVVHVCDSDIEEEEDPKTSPKPKIIQTRRPG 190
Query: 1021 PPPA 1032
PPP+
Sbjct: 191 PPPS 194
>ref|NP_001029851.1| calcipressin-1 [Bos taurus].
Length = 197
Score = 216 bits (551), Expect = 4e-56
Identities = 114/192 (59%), Positives = 135/192 (70%), Gaps = 6/192 (3%)
Frame = +1
Query: 484 TSLFACSVHEAVFEVQEQKERFEALFTIYDDQVTFQLFKSFRRVRINFSKPEAAARARIE 663
+SL AC + +F E + +FE+LF YD +TFQ FKSF+RVRINFS P +AA AR++
Sbjct: 11 SSLIACVANSEIFSESETRAKFESLFRTYDKDITFQYFKSFKRVRINFSNPLSAADARLQ 70
Query: 664 LHETDFNGKKLKLYFAQ-VQVSSETRDRSYLLPPQPVKQFLISPPASPPVGWKQGEDAMP 840
LH+T+F GK++KLYFAQ + + S S+L PP P KQFLISPPASPPVGWKQ EDA P
Sbjct: 71 LHKTEFLGKEMKLYFAQTLHIGS-----SHLAPPNPDKQFLISPPASPPVGWKQVEDATP 125
Query: 841 VINYDLLCAVSKLGPGEKYELHAGTESTPSVVVHVC-----XXXXXXXXXXXXPKQKITQ 1005
VINYDLL A+SKLGPGEKYELHA T++TPSVVVHVC PK KI Q
Sbjct: 126 VINYDLLYAISKLGPGEKYELHAATDTTPSVVVHVCESDQENEEEDEMERMKRPKPKIIQ 185
Query: 1006 TRRPEPPPAALS 1041
TRRPE P LS
Sbjct: 186 TRRPEYTPIHLS 197
Database: RefSeq49_BP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 17,681,374
Number of sequences in database: 33,088
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33088
Number of Hits to DB: 51,966,959
Number of extensions: 1656692
Number of successful extensions: 6317
Number of sequences better than 1.0e-05: 3
Number of HSP's gapped: 6301
Number of HSP's successfully gapped: 3
Length of query: 549
Length of database: 17,681,374
Length adjustment: 107
Effective length of query: 442
Effective length of database: 14,140,958
Effective search space: 6250303436
Effective search space used: 6250303436
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to RefSeqSP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-012680
(1649 letters)
Database: RefSeq49_SP.fasta
24,897 sequences; 11,343,932 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_003127754.2| PREDICTED: calcipressin-3-like [Sus scrofa]. 331 6e-91
Alignment gi|XP_001927871.1| PREDICTED: calcipressin-2 [Sus scrofa]. 249 4e-66
Alignment gi|NP_001230842.1| regulator of calcineurin 1 [Sus scrofa]. 216 2e-56
>ref|XP_003127754.2| PREDICTED: calcipressin-3-like [Sus scrofa].
Length = 331
Score = 331 bits (849), Expect = 6e-91
Identities = 164/177 (92%), Positives = 165/177 (93%)
Frame = +1
Query: 538 KERFEALFTIYDDQVTFQLFKSFRRVRINFSKPEAAARARIELHETDFNGKKLKLYFAQV 717
+ERFEALFTIYDDQVTFQLFKSFRRVRINFSKPEAAARARIELHETDFNGKKLKLYFAQV
Sbjct: 155 QERFEALFTIYDDQVTFQLFKSFRRVRINFSKPEAAARARIELHETDFNGKKLKLYFAQV 214
Query: 718 QVSSETRDRSYLLPPQPVKQFLISPPASPPVGWKQGEDAMPVINYDLLCAVSKLGPGEKY 897
QVSSETRDRSYLLPPQPVKQFLISPPASPPVGWKQGEDAMPVINYDLLCAVSKLGPGEKY
Sbjct: 215 QVSSETRDRSYLLPPQPVKQFLISPPASPPVGWKQGEDAMPVINYDLLCAVSKLGPGEKY 274
Query: 898 ELHAGTESTPSVVVHVCXXXXXXXXXXXXPKQKITQTRRPEPPPAALSEPRAFDCAL 1068
ELHAGTESTPSVVVHVC PKQKITQTRRPEPPPAALSEPRAFDCAL
Sbjct: 275 ELHAGTESTPSVVVHVCESETEEEEETRTPKQKITQTRRPEPPPAALSEPRAFDCAL 331
Score = 80.1 bits (196), Expect = 3e-15
Identities = 35/53 (66%), Positives = 35/53 (66%)
Frame = +1
Query: 130 WRRGCWXXXXXXXXXXXXXXXXXXTGPSWLLGHFAARPASPCLPAFLRPPCAQ 288
WRRGCW TGPSWLLGHFAARPASPCLPAFLRPPCAQ
Sbjct: 103 WRRGCWRPARHRLLPRWRPLRLPRTGPSWLLGHFAARPASPCLPAFLRPPCAQ 155
>ref|XP_001927871.1| PREDICTED: calcipressin-2 [Sus scrofa].
Length = 197
Score = 249 bits (635), Expect = 4e-66
Identities = 128/184 (69%), Positives = 139/184 (75%), Gaps = 1/184 (0%)
Frame = +1
Query: 484 TSLFACSVHEAVFEVQEQKERFEALFTIYDDQVTFQLFKSFRRVRINFSKPEAAARARIE 663
++L AC V VF QE KE+FE LF YDD VTFQLFKSFRRVRINFS P++AARARIE
Sbjct: 11 STLVACVVDVEVFTNQEVKEKFEGLFRTYDDCVTFQLFKSFRRVRINFSNPKSAARARIE 70
Query: 664 LHETDFNGKKLKLYFAQVQVSSETRDRSYLLPPQPVKQFLISPPASPPVGWKQGEDAMPV 843
LHET F GKKLKLYFAQVQ D+ +L PPQP KQFLISPPASPPVGW+ DA PV
Sbjct: 71 LHETQFRGKKLKLYFAQVQTPETDGDKLHLAPPQPAKQFLISPPASPPVGWQPISDATPV 130
Query: 844 INYDLLCAVSKLGPGEKYELHAGTESTPSVVVHVC-XXXXXXXXXXXXPKQKITQTRRPE 1020
+NYDLL AV+KLGPGEKYELHAGTESTPSVVVHVC PK KI QTRRP
Sbjct: 131 LNYDLLYAVAKLGPGEKYELHAGTESTPSVVVHVCDSDIEEEEDPKTSPKPKIIQTRRPG 190
Query: 1021 PPPA 1032
PPP+
Sbjct: 191 PPPS 194
>ref|NP_001230842.1| regulator of calcineurin 1 [Sus scrofa].
Length = 197
Score = 216 bits (551), Expect = 2e-56
Identities = 115/192 (59%), Positives = 135/192 (70%), Gaps = 6/192 (3%)
Frame = +1
Query: 484 TSLFACSVHEAVFEVQEQKERFEALFTIYDDQVTFQLFKSFRRVRINFSKPEAAARARIE 663
+SL AC + VF E + +FE+LF YD +TFQ FKSF+RVRINFS P +AA AR++
Sbjct: 11 SSLIACVANSDVFSESETRAKFESLFRTYDKDITFQYFKSFKRVRINFSNPLSAADARLQ 70
Query: 664 LHETDFNGKKLKLYFAQ-VQVSSETRDRSYLLPPQPVKQFLISPPASPPVGWKQGEDAMP 840
LH+T+F GK++KLYFAQ + + S S+L PP P KQFLISPPASPPVGWKQ EDA P
Sbjct: 71 LHKTEFLGKEMKLYFAQTLHIGS-----SHLAPPNPDKQFLISPPASPPVGWKQVEDATP 125
Query: 841 VINYDLLCAVSKLGPGEKYELHAGTESTPSVVVHVC-----XXXXXXXXXXXXPKQKITQ 1005
VINYDLL A+SKLGPGEKYELHA T++TPSVVVHVC PK KI Q
Sbjct: 126 VINYDLLYAISKLGPGEKYELHAATDTTPSVVVHVCESDQENEDEDEMERMKRPKPKIIQ 185
Query: 1006 TRRPEPPPAALS 1041
TRRPE P LS
Sbjct: 186 TRRPEYTPIHLS 197
Database: RefSeq49_SP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 11,343,932
Number of sequences in database: 24,897
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 24897
Number of Hits to DB: 35,332,556
Number of extensions: 1375568
Number of successful extensions: 4088
Number of sequences better than 1.0e-05: 3
Number of HSP's gapped: 4072
Number of HSP's successfully gapped: 4
Length of query: 549
Length of database: 11,343,932
Length adjustment: 104
Effective length of query: 445
Effective length of database: 8,754,644
Effective search space: 3895816580
Effective search space used: 3895816580
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to RefSeqMP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-012680
(1649 letters)
Database: RefSeq49_MP.fasta
30,036 sequences; 15,617,559 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_075356.1| calcipressin-3 [Mus musculus]. 337 2e-92
Alignment gi|NP_997532.1| calcipressin-2 isoform 1 [Mus musculus]. 259 6e-69
Alignment gi|NP_085101.1| calcipressin-2 isoform 2 [Mus musculus]. 243 2e-64
Alignment gi|NP_062339.2| calcipressin-1 isoform 2 [Mus musculus]. 215 9e-56
Alignment gi|NP_001075018.1| calcipressin-1 isoform 1 [Mus musculus]. 208 1e-53
>ref|NP_075356.1| calcipressin-3 [Mus musculus].
Length = 239
Score = 337 bits (864), Expect = 2e-92
Identities = 171/215 (79%), Positives = 178/215 (82%)
Frame = +1
Query: 424 MIFGXXXXXXXXXXXXXXXPTSLFACSVHEAVFEVQEQKERFEALFTIYDDQVTFQLFKS 603
M+FG PTSLFACSVHEAVFEVQEQKERFEALFT+YDDQVTFQLFKS
Sbjct: 27 MVFGENEDGLEEMMDLSDLPTSLFACSVHEAVFEVQEQKERFEALFTLYDDQVTFQLFKS 86
Query: 604 FRRVRINFSKPEAAARARIELHETDFNGKKLKLYFAQVQVSSETRDRSYLLPPQPVKQFL 783
FRRVRINFSKPEAAARARIELHE++F+G+KLKLYFAQVQVS E RD+SYLLPPQP KQFL
Sbjct: 87 FRRVRINFSKPEAAARARIELHESEFHGRKLKLYFAQVQVSGEARDKSYLLPPQPTKQFL 146
Query: 784 ISPPASPPVGWKQGEDAMPVINYDLLCAVSKLGPGEKYELHAGTESTPSVVVHVCXXXXX 963
ISPPASPPVGWKQ EDAMPVINYDLLCAVSKLGPGEKYELHAGTESTPSVVVHVC
Sbjct: 147 ISPPASPPVGWKQSEDAMPVINYDLLCAVSKLGPGEKYELHAGTESTPSVVVHVCESETE 206
Query: 964 XXXXXXXPKQKITQTRRPEPPPAALSEPRAFDCAL 1068
PKQKITQTRRPE P AALSE DCAL
Sbjct: 207 EEEDTKNPKQKITQTRRPEAPTAALSE--RLDCAL 239
>ref|NP_997532.1| calcipressin-2 isoform 1 [Mus musculus].
Length = 243
Score = 259 bits (661), Expect = 6e-69
Identities = 130/185 (70%), Positives = 144/185 (77%), Gaps = 1/185 (0%)
Frame = +1
Query: 481 PTSLFACSVHEAVFEVQEQKERFEALFTIYDDQVTFQLFKSFRRVRINFSKPEAAARARI 660
P SLFAC+VH++VFE +E KE+FE LF YD+ VTFQLFKSFRRVRINFS P++AARARI
Sbjct: 56 PNSLFACNVHQSVFEEEESKEKFEGLFRTYDECVTFQLFKSFRRVRINFSHPKSAARARI 115
Query: 661 ELHETDFNGKKLKLYFAQVQVSSETRDRSYLLPPQPVKQFLISPPASPPVGWKQGEDAMP 840
ELHET F GKKLKLYFAQVQ D+ +L PPQP KQFLISPP+SPPVGWK DA P
Sbjct: 116 ELHETQFRGKKLKLYFAQVQTPETDGDKLHLAPPQPAKQFLISPPSSPPVGWKPISDATP 175
Query: 841 VINYDLLCAVSKLGPGEKYELHAGTESTPSVVVHVC-XXXXXXXXXXXXPKQKITQTRRP 1017
V+NYDLL AV+KLGPGEKYELHAGTESTPSVVVHVC PK KI QTRRP
Sbjct: 176 VLNYDLLYAVAKLGPGEKYELHAGTESTPSVVVHVCDSDMEEEEDPKTSPKPKIIQTRRP 235
Query: 1018 EPPPA 1032
PP+
Sbjct: 236 GLPPS 240
>ref|NP_085101.1| calcipressin-2 isoform 2 [Mus musculus].
Length = 197
Score = 243 bits (621), Expect = 2e-64
Identities = 126/184 (68%), Positives = 138/184 (75%), Gaps = 1/184 (0%)
Frame = +1
Query: 484 TSLFACSVHEAVFEVQEQKERFEALFTIYDDQVTFQLFKSFRRVRINFSKPEAAARARIE 663
++L AC V VF QE KE+FE LF YD+ VTFQLFKSFRRVRINFS P++AARARIE
Sbjct: 11 STLVACVVDVEVFTNQEVKEKFEGLFRTYDECVTFQLFKSFRRVRINFSHPKSAARARIE 70
Query: 664 LHETDFNGKKLKLYFAQVQVSSETRDRSYLLPPQPVKQFLISPPASPPVGWKQGEDAMPV 843
LHET F GKKLKLYFAQVQ D+ +L PPQP KQFLISPP+SPPVGWK DA PV
Sbjct: 71 LHETQFRGKKLKLYFAQVQTPETDGDKLHLAPPQPAKQFLISPPSSPPVGWKPISDATPV 130
Query: 844 INYDLLCAVSKLGPGEKYELHAGTESTPSVVVHVC-XXXXXXXXXXXXPKQKITQTRRPE 1020
+NYDLL AV+KLGPGEKYELHAGTESTPSVVVHVC PK KI QTRRP
Sbjct: 131 LNYDLLYAVAKLGPGEKYELHAGTESTPSVVVHVCDSDMEEEEDPKTSPKPKIIQTRRPG 190
Query: 1021 PPPA 1032
PP+
Sbjct: 191 LPPS 194
>ref|NP_062339.2| calcipressin-1 isoform 2 [Mus musculus].
Length = 198
Score = 215 bits (547), Expect = 9e-56
Identities = 115/193 (59%), Positives = 134/193 (69%), Gaps = 7/193 (3%)
Frame = +1
Query: 484 TSLFACSVHEAVFEVQEQKERFEALFTIYDDQVTFQLFKSFRRVRINFSKPEAAARARIE 663
+SL AC ++ VF E + +FE+LF YD TFQ FKSF+RVRINFS P +AA AR+
Sbjct: 11 SSLIACVANDDVFSESETRAKFESLFRTYDKDTTFQYFKSFKRVRINFSNPLSAADARLR 70
Query: 664 LHETDFNGKKLKLYFAQ-VQVSSETRDRSYLLPPQPVKQFLISPPASPPVGWKQGEDAMP 840
LH+T+F GK++KLYFAQ + + S S+L PP P KQFLISPPASPPVGWKQ EDA P
Sbjct: 71 LHKTEFLGKEMKLYFAQTLHIGS-----SHLAPPNPDKQFLISPPASPPVGWKQVEDATP 125
Query: 841 VINYDLLCAVSKLGPGEKYELHAGTESTPSVVVHVC------XXXXXXXXXXXXPKQKIT 1002
VINYDLL A+SKLGPGEKYELHA T++TPSVVVHVC PK KI
Sbjct: 126 VINYDLLYAISKLGPGEKYELHAATDTTPSVVVHVCESDQENEEEEEEMERMKRPKPKII 185
Query: 1003 QTRRPEPPPAALS 1041
QTRRPE P LS
Sbjct: 186 QTRRPEYTPIHLS 198
>ref|NP_001075018.1| calcipressin-1 isoform 1 [Mus musculus].
Length = 251
Score = 208 bits (529), Expect = 1e-53
Identities = 113/194 (58%), Positives = 132/194 (68%), Gaps = 7/194 (3%)
Frame = +1
Query: 481 PTSLFACSVHEAVFEVQEQKERFEALFTIYDDQVTFQLFKSFRRVRINFSKPEAAARARI 660
P++ AC + VF + +FE+LF YD TFQ FKSF+RVRINFS P +AA AR+
Sbjct: 63 PSATIACHLDPRVFVDGLCRAKFESLFRTYDKDTTFQYFKSFKRVRINFSNPLSAADARL 122
Query: 661 ELHETDFNGKKLKLYFAQ-VQVSSETRDRSYLLPPQPVKQFLISPPASPPVGWKQGEDAM 837
LH+T+F GK++KLYFAQ + + S S+L PP P KQFLISPPASPPVGWKQ EDA
Sbjct: 123 RLHKTEFLGKEMKLYFAQTLHIGS-----SHLAPPNPDKQFLISPPASPPVGWKQVEDAT 177
Query: 838 PVINYDLLCAVSKLGPGEKYELHAGTESTPSVVVHVC------XXXXXXXXXXXXPKQKI 999
PVINYDLL A+SKLGPGEKYELHA T++TPSVVVHVC PK KI
Sbjct: 178 PVINYDLLYAISKLGPGEKYELHAATDTTPSVVVHVCESDQENEEEEEEMERMKRPKPKI 237
Query: 1000 TQTRRPEPPPAALS 1041
QTRRPE P LS
Sbjct: 238 IQTRRPEYTPIHLS 251
Database: RefSeq49_MP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 15,617,559
Number of sequences in database: 30,036
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 30036
Number of Hits to DB: 43,899,245
Number of extensions: 1215802
Number of successful extensions: 4629
Number of sequences better than 1.0e-05: 5
Number of HSP's gapped: 4602
Number of HSP's successfully gapped: 5
Length of query: 549
Length of database: 15,617,559
Length adjustment: 106
Effective length of query: 443
Effective length of database: 12,433,743
Effective search space: 5508148149
Effective search space used: 5508148149
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to RefSeqHP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-012680
(1649 letters)
Database: RefSeq49_HP.fasta
32,964 sequences; 18,297,164 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_038469.1| calcipressin-3 [Homo sapiens]. 350 2e-96
Alignment gi|NP_005813.2| calcipressin-2 [Homo sapiens]. 244 2e-64
Alignment gi|NP_981963.1| calcipressin-1 isoform c [Homo sapiens]. 216 5e-56
Alignment gi|NP_004405.3| calcipressin-1 isoform a [Homo sapiens]. 210 3e-54
Alignment gi|NP_981962.1| calcipressin-1 isoform b [Homo sapiens]. 139 6e-33
>ref|NP_038469.1| calcipressin-3 [Homo sapiens].
Length = 241
Score = 350 bits (898), Expect = 2e-96
Identities = 180/241 (74%), Positives = 188/241 (78%), Gaps = 1/241 (0%)
Frame = +1
Query: 349 VLRDTMKXXXXXXXXXXXXXXXXXX-MIFGXXXXXXXXXXXXXXXPTSLFACSVHEAVFE 525
+LRDTMK MIFG PTSLFACSVHEAVFE
Sbjct: 1 MLRDTMKSWNDSQSDLCSTDQEEEEEMIFGENEDDLDEMMDLSDLPTSLFACSVHEAVFE 60
Query: 526 VQEQKERFEALFTIYDDQVTFQLFKSFRRVRINFSKPEAAARARIELHETDFNGKKLKLY 705
+EQKERFEALFTIYDDQVTFQLFKSFRRVRINFSKPEAAARARIELHETDFNG+KLKLY
Sbjct: 61 AREQKERFEALFTIYDDQVTFQLFKSFRRVRINFSKPEAAARARIELHETDFNGQKLKLY 120
Query: 706 FAQVQVSSETRDRSYLLPPQPVKQFLISPPASPPVGWKQGEDAMPVINYDLLCAVSKLGP 885
FAQVQ+S E RD+SYLLPPQPVKQFLISPPASPPVGWKQ EDAMPVINYDLLCAVSKLGP
Sbjct: 121 FAQVQMSGEVRDKSYLLPPQPVKQFLISPPASPPVGWKQSEDAMPVINYDLLCAVSKLGP 180
Query: 886 GEKYELHAGTESTPSVVVHVCXXXXXXXXXXXXPKQKITQTRRPEPPPAALSEPRAFDCA 1065
GEKYELHAGTESTPSVVVHVC PKQKI QTRRP+PP AAL+EP+ FDCA
Sbjct: 181 GEKYELHAGTESTPSVVVHVCESETEEEEETKNPKQKIAQTRRPDPPTAALNEPQTFDCA 240
Query: 1066 L 1068
L
Sbjct: 241 L 241
>ref|NP_005813.2| calcipressin-2 [Homo sapiens].
Length = 197
Score = 244 bits (622), Expect = 2e-64
Identities = 126/184 (68%), Positives = 138/184 (75%), Gaps = 1/184 (0%)
Frame = +1
Query: 484 TSLFACSVHEAVFEVQEQKERFEALFTIYDDQVTFQLFKSFRRVRINFSKPEAAARARIE 663
++L AC V VF QE KE+FE LF YDD VTFQLFKSFRRVRINFS P++AARARIE
Sbjct: 11 STLVACVVDVEVFTNQEVKEKFEGLFRTYDDCVTFQLFKSFRRVRINFSNPKSAARARIE 70
Query: 664 LHETDFNGKKLKLYFAQVQVSSETRDRSYLLPPQPVKQFLISPPASPPVGWKQGEDAMPV 843
LHET F GKKLKLYFAQVQ D+ +L PPQP KQFLISPP+SPPVGW+ DA PV
Sbjct: 71 LHETQFRGKKLKLYFAQVQTPETDGDKLHLAPPQPAKQFLISPPSSPPVGWQPINDATPV 130
Query: 844 INYDLLCAVSKLGPGEKYELHAGTESTPSVVVHVC-XXXXXXXXXXXXPKQKITQTRRPE 1020
+NYDLL AV+KLGPGEKYELHAGTESTPSVVVHVC PK KI QTRRP
Sbjct: 131 LNYDLLYAVAKLGPGEKYELHAGTESTPSVVVHVCDSDIEEEEDPKTSPKPKIIQTRRPG 190
Query: 1021 PPPA 1032
PP+
Sbjct: 191 LPPS 194
>ref|NP_981963.1| calcipressin-1 isoform c [Homo sapiens].
Length = 197
Score = 216 bits (550), Expect = 5e-56
Identities = 114/192 (59%), Positives = 135/192 (70%), Gaps = 6/192 (3%)
Frame = +1
Query: 484 TSLFACSVHEAVFEVQEQKERFEALFTIYDDQVTFQLFKSFRRVRINFSKPEAAARARIE 663
+SL AC + +F E + +FE+LF YD +TFQ FKSF+RVRINFS P +AA AR++
Sbjct: 11 SSLIACVANSDIFSESETRAKFESLFRTYDKDITFQYFKSFKRVRINFSNPFSAADARLQ 70
Query: 664 LHETDFNGKKLKLYFAQ-VQVSSETRDRSYLLPPQPVKQFLISPPASPPVGWKQGEDAMP 840
LH+T+F GK++KLYFAQ + + S S+L PP P KQFLISPPASPPVGWKQ EDA P
Sbjct: 71 LHKTEFLGKEMKLYFAQTLHIGS-----SHLAPPNPDKQFLISPPASPPVGWKQVEDATP 125
Query: 841 VINYDLLCAVSKLGPGEKYELHAGTESTPSVVVHVC-----XXXXXXXXXXXXPKQKITQ 1005
VINYDLL A+SKLGPGEKYELHA T++TPSVVVHVC PK KI Q
Sbjct: 126 VINYDLLYAISKLGPGEKYELHAATDTTPSVVVHVCESDQEKEEEEEMERMRRPKPKIIQ 185
Query: 1006 TRRPEPPPAALS 1041
TRRPE P LS
Sbjct: 186 TRRPEYTPIHLS 197
>ref|NP_004405.3| calcipressin-1 isoform a [Homo sapiens].
Length = 252
Score = 210 bits (535), Expect = 3e-54
Identities = 113/193 (58%), Positives = 134/193 (69%), Gaps = 6/193 (3%)
Frame = +1
Query: 481 PTSLFACSVHEAVFEVQEQKERFEALFTIYDDQVTFQLFKSFRRVRINFSKPEAAARARI 660
P++ AC + VF + +FE+LF YD +TFQ FKSF+RVRINFS P +AA AR+
Sbjct: 65 PSATIACHLDPRVFVDGLCRAKFESLFRTYDKDITFQYFKSFKRVRINFSNPFSAADARL 124
Query: 661 ELHETDFNGKKLKLYFAQ-VQVSSETRDRSYLLPPQPVKQFLISPPASPPVGWKQGEDAM 837
+LH+T+F GK++KLYFAQ + + S S+L PP P KQFLISPPASPPVGWKQ EDA
Sbjct: 125 QLHKTEFLGKEMKLYFAQTLHIGS-----SHLAPPNPDKQFLISPPASPPVGWKQVEDAT 179
Query: 838 PVINYDLLCAVSKLGPGEKYELHAGTESTPSVVVHVC-----XXXXXXXXXXXXPKQKIT 1002
PVINYDLL A+SKLGPGEKYELHA T++TPSVVVHVC PK KI
Sbjct: 180 PVINYDLLYAISKLGPGEKYELHAATDTTPSVVVHVCESDQEKEEEEEMERMRRPKPKII 239
Query: 1003 QTRRPEPPPAALS 1041
QTRRPE P LS
Sbjct: 240 QTRRPEYTPIHLS 252
>ref|NP_981962.1| calcipressin-1 isoform b [Homo sapiens].
Length = 117
Score = 139 bits (351), Expect = 6e-33
Identities = 77/122 (63%), Positives = 84/122 (68%), Gaps = 6/122 (4%)
Frame = +1
Query: 694 LKLYFAQ-VQVSSETRDRSYLLPPQPVKQFLISPPASPPVGWKQGEDAMPVINYDLLCAV 870
+KLYFAQ + + S S+L PP P KQFLISPPASPPVGWKQ EDA PVINYDLL A+
Sbjct: 1 MKLYFAQTLHIGS-----SHLAPPNPDKQFLISPPASPPVGWKQVEDATPVINYDLLYAI 55
Query: 871 SKLGPGEKYELHAGTESTPSVVVHVC-----XXXXXXXXXXXXPKQKITQTRRPEPPPAA 1035
SKLGPGEKYELHA T++TPSVVVHVC PK KI QTRRPE P
Sbjct: 56 SKLGPGEKYELHAATDTTPSVVVHVCESDQEKEEEEEMERMRRPKPKIIQTRRPEYTPIH 115
Query: 1036 LS 1041
LS
Sbjct: 116 LS 117
Database: RefSeq49_HP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,297,164
Number of sequences in database: 32,964
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 32964
Number of Hits to DB: 51,866,071
Number of extensions: 1453268
Number of successful extensions: 6041
Number of sequences better than 1.0e-05: 5
Number of HSP's gapped: 6012
Number of HSP's successfully gapped: 5
Length of query: 549
Length of database: 18,297,164
Length adjustment: 108
Effective length of query: 441
Effective length of database: 14,737,052
Effective search space: 6499039932
Effective search space used: 6499039932
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to Sscrofa10_2
BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-012680
(1649 letters)
Database: Sscrofa_10.2.fasta
4582 sequences; 2,808,509,378 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Sscrofa_Chr06 1070 0.0
>Sscrofa_Chr06
|| Length = 157765593
Score = 1070 bits (540), Expect = 0.0
Identities = 554/561 (98%)
Strand = Plus / Plus
Query: 884 caggagagaaatatgagcttcacgcaggaacagagtcaacaccgagtgtggtggttcatg 943
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 75925919 caggagagaaatatgagcttcacgcaggaacagagtcaacaccgagtgtggtggttcatg 75925978
Query: 944 tctgtgaaagtgagactgaagaggaagaagaaaccagaacccctaaacagaaaatcaccc 1003
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 75925979 tctgtgaaagtgagactgaagaggaagaagaaaccagaacccctaaacagaaaatcaccc 75926038
Query: 1004 agacaaggcgccccgagcctccacctgcagccctgagcgagccccgggccttcgattgtg 1063
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 75926039 agacaaggcgccccgagcctccacctgcagccctgagcgagccccgggccttcgattgtg 75926098
Query: 1064 cgctgtgaggctttggtggctcgaggcagcggcccgcgtggctgggcagcgggggccaca 1123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 75926099 cgctgtgaggctttggtggctcgaggcagcggcccgcgtggctgggcagcgggggccaca 75926158
Query: 1124 cgccggaaatggggaccgcctgacacctgcataacctcggccaggccaggacggagccga 1183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 75926159 cgccggaaatggggaccgcctgacacctgcataacctcggccaggccaggacggagccga 75926218
Query: 1184 gcacctgtgccgtgggccgtgcggtacagaaccgtggccgggtttgcctgtgcaaaactt 1243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 75926219 gcacctgtgccgtgggccgtgcggtacagaaccgtggccgggtttgcctgtgcaaaactt 75926278
Query: 1244 aaacgatgttccaaacagcaccttaaagtaaagaatagccccccaacctgtggcaactct 1303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 75926279 aaacgatgttccaaacagcaccttaaagtaaagaatagccccccaacctgtggcaactct 75926338
Query: 1304 tcaccctttttaaacagtagcaaattaggaaaatgnnnnnnntctagcaacattaatttc 1363
||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 75926339 tcaccctttttaaacagtagcaaattaggaaaatgccccccctctagcaacattaatttc 75926398
Query: 1364 tctgattctatatagcatggggtacccagaaaaccaaaactagtcaccaggtgcagtact 1423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 75926399 tctgattctatatagcatggggtacccagaaaaccaaaactagtcaccaggtgcagtact 75926458
Query: 1424 acttaaaaatagtcttactca 1444
|||||||||||||||||||||
Sbjct: 75926459 acttaaaaatagtcttactca 75926479
Score = 507 bits (256), Expect = e-141
Identities = 256/256 (100%)
Strand = Plus / Minus
Query: 286 cagtagatgcctggtagacaccttagaactttaaaaacggaaaagacctgctttgagggg 345
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 75902780 cagtagatgcctggtagacaccttagaactttaaaaacggaaaagacctgctttgagggg 75902721
Query: 346 acagtgctgagggacactatgaaatcttggagtgatagccagtcagatctctgtagcagt 405
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 75902720 acagtgctgagggacactatgaaatcttggagtgatagccagtcagatctctgtagcagt 75902661
Query: 406 gaccaagaggaagaagacatgatttttggtgaaaatgaagaggatttggaagagatgatg 465
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 75902660 gaccaagaggaagaagacatgatttttggtgaaaatgaagaggatttggaagagatgatg 75902601
Query: 466 gatttaagtgacctgcctacctccctttttgcgtgcagtgtccatgaagcagtgtttgag 525
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 75902600 gatttaagtgacctgcctacctccctttttgcgtgcagtgtccatgaagcagtgtttgag 75902541
Query: 526 gtgcaggagcagaagg 541
||||||||||||||||
Sbjct: 75902540 gtgcaggagcagaagg 75902525
Score = 418 bits (211), Expect = e-114
Identities = 220/223 (98%)
Strand = Plus / Plus
Query: 66 ttttcttgcctagacgccgctcgcgcccccgccaaggcggcagctcccgccggcgtcgag 125
|||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||
Sbjct: 75877286 ttttcttgcctagacgccgctcgcgcccccgccaaggcggcagctccccccggcttcgag 75877345
Query: 126 ggcgtggcggcgaggctgctggcggccggcgcggcaccgactcttaccccgctggcgtcc 185
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 75877346 ggcgtggcggcgaggctgctggcggccggcgcggcaccgactcttaccccgttggcgtcc 75877405
Query: 186 gctgcgcctccccaggaccggaccttcgtggctccttggacactttgcagcgcgtccggc 245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 75877406 gctgcgcctccccaggaccggaccttcgtggctccttggacactttgcagcgcgtccggc 75877465
Query: 246 ctctccctgccttcctgccttcctgcgcccgccatgcgcgcag 288
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 75877466 ctctccctgccttcctgccttcctgcgcccgccatgcgcgcag 75877508
Score = 353 bits (178), Expect = 2e-94
Identities = 178/178 (100%)
Strand = Plus / Plus
Query: 539 aggagagattcgaagcacttttcaccatctatgacgaccaagtaacgtttcagttgttta 598
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 75922419 aggagagattcgaagcacttttcaccatctatgacgaccaagtaacgtttcagttgttta 75922478
Query: 599 aaagctttcgaagagtcagaataaatttcagcaaacctgaagcagcagcaagggctcgaa 658
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 75922479 aaagctttcgaagagtcagaataaatttcagcaaacctgaagcagcagcaagggctcgaa 75922538
Query: 659 tagagcttcatgagacagacttcaacgggaagaagctgaagctgtatttcgcacaggt 716
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 75922539 tagagcttcatgagacagacttcaacgggaagaagctgaagctgtatttcgcacaggt 75922596
Score = 349 bits (176), Expect = 3e-93
Identities = 176/176 (100%)
Strand = Plus / Plus
Query: 712 caggtgcaggtgtccagtgaaactcgggacagatcgtacctgctgccgccccagcctgtc 771
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 75924213 caggtgcaggtgtccagtgaaactcgggacagatcgtacctgctgccgccccagcctgtc 75924272
Query: 772 aagcagttcctcatctccccgcctgcgtctcctccggtgggctggaagcagggggaggac 831
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 75924273 aagcagttcctcatctccccgcctgcgtctcctccggtgggctggaagcagggggaggac 75924332
Query: 832 gcgatgcctgttataaattatgatttgctctgtgctgtttccaaactgggaccagg 887
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 75924333 gcgatgcctgttataaattatgatttgctctgtgctgtttccaaactgggaccagg 75924388
Database: Sscrofa_10.2.fasta
Posted date: Nov 16, 2011 10:34 AM
Number of letters in database: 2,808,509,378
Number of sequences in database: 4582
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4582
Number of Hits to DB: 40,146,172
Number of extensions: 348
Number of successful extensions: 348
Number of sequences better than 1.0e-05: 1
Number of HSP's gapped: 347
Number of HSP's successfully gapped: 5
Length of query: 1649
Length of database: 2,808,509,378
Length adjustment: 22
Effective length of query: 1627
Effective length of database: 2,808,408,574
Effective search space: 4569280749898
Effective search space used: 4569280749898
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 18 (36.2 bits)
S2: 30 (60.0 bits)