Search to RefSeqBP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-012728
(1173 letters)
Database: RefSeq49_BP.fasta
33,088 sequences; 17,681,374 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001029387.1| GTP-binding protein Di-Ras3 [Bos taurus]. 392 e-109
Alignment gi|NP_001178993.1| GTP-binding protein Di-Ras2 [Bos taurus]. 212 6e-55
Alignment gi|XP_002689890.1| PREDICTED: Di-Ras2-like [Bos taurus]. 212 6e-55
Alignment gi|NP_001179871.1| ras-related protein Rap-2a [Bos taurus]. 137 1e-32
Alignment gi|XP_002692010.1| PREDICTED: RAP2A, member of RAS oncogene fam... 137 1e-32
Alignment gi|NP_001096001.1| ras-related protein Rap-2b [Bos taurus]. 134 2e-31
Alignment gi|NP_001069168.1| ras-related protein Rap-2c precursor [Bos ta... 133 3e-31
Alignment gi|NP_787018.1| ras-related protein Rap-1b precursor [Bos tauru... 129 5e-30
Alignment gi|NP_776873.1| ras-related protein Rap-1A precursor [Bos tauru... 128 9e-30
Alignment gi|XP_002689005.1| PREDICTED: RAP1B, member of RAS oncogene fam... 127 2e-29
>ref|NP_001029387.1| GTP-binding protein Di-Ras3 [Bos taurus].
Length = 233
Score = 392 bits (1006), Expect = e-109
Identities = 197/233 (84%), Positives = 204/233 (87%), Gaps = 5/233 (2%)
Frame = +2
Query: 401 MGNSCFGLKERLMKRLRPLPTVIVIRTCLPQRRSRDFRVVVLGSAGVGKSALVQRWVRGN 580
MGNSCFGLKERLMKRLRPLPTVIVIRTCLPQRRSRDFRVVVLGSAGVGKSALVQRWVRGN
Sbjct: 1 MGNSCFGLKERLMKRLRPLPTVIVIRTCLPQRRSRDFRVVVLGSAGVGKSALVQRWVRGN 60
Query: 581 FREAYLPTIEDTYRQVLGCSHKVGALHITDTTGGRRYRGLQRLAIARGHAFILVYSVTKK 760
FREAYLPTIEDTYRQ LGCSHK GALHITDTTGGRRYRGLQRLAIARGHAFILVYS+T+K
Sbjct: 61 FREAYLPTIEDTYRQALGCSHKAGALHITDTTGGRRYRGLQRLAIARGHAFILVYSITRK 120
Query: 761 HTLEELKPLYHLIRELKGNNPLKCPIILVGNKCDESHREVSEKEGAACASEWNCAFLETS 940
TLEELKPLY LIR+LKGNNP KCP+ILVGNKCDES REVSEKEGAA A EWNCAFLETS
Sbjct: 121 QTLEELKPLYELIRQLKGNNPQKCPVILVGNKCDESRREVSEKEGAAYACEWNCAFLETS 180
Query: 941 AKMNINVQELFQMLLNHE-----XXXXXXXXXXXXXXXIPKTAEKLLGKCIIM 1084
AKMNINVQELFQ+L+N E IPKTAEKLLGKCI+M
Sbjct: 181 AKMNINVQELFQLLINFEKKPAAAAAPAGAQPPQKKSQIPKTAEKLLGKCIVM 233
>ref|NP_001178993.1| GTP-binding protein Di-Ras2 [Bos taurus].
Length = 199
Score = 212 bits (539), Expect = 6e-55
Identities = 106/197 (53%), Positives = 138/197 (70%), Gaps = 1/197 (0%)
Frame = +2
Query: 497 RSRDFRVVVLGSAGVGKSALVQRWVRGNFREAYLPTIEDTYRQVLGCSHKVGALHITDTT 676
+S D+RV V G+ GVGKS+LV R+V+G FRE+Y+PT+EDTYRQV+ C + L ITDTT
Sbjct: 4 QSNDYRVAVFGAGGVGKSSLVLRFVKGTFRESYIPTVEDTYRQVISCDKSICTLQITDTT 63
Query: 677 GGRRYRGLQRLAIARGHAFILVYSVTKKHTLEELKPLYHLIRELKGNNPLKCPIILVGNK 856
G ++ +QRL+I++GHAFILVYS+T + +LEELKP+Y I E+KG+ PI+LVGNK
Sbjct: 64 GSHQFPAMQRLSISKGHAFILVYSITSRQSLEELKPIYEQICEIKGDVE-SIPIMLVGNK 122
Query: 857 CDES-HREVSEKEGAACASEWNCAFLETSAKMNINVQELFQMLLNHEXXXXXXXXXXXXX 1033
CDES +REV E A +W CAF+ETSAK+N+NV+ELFQ LLN E
Sbjct: 123 CDESPNREVESSEAEVLARKWKCAFMETSAKLNLNVKELFQELLNLEKRRTVSLQIDGKK 182
Query: 1034 XXIPKTAEKLLGKCIIM 1084
K EKL GKC++M
Sbjct: 183 SKQQKRKEKLKGKCVVM 199
>ref|XP_002689890.1| PREDICTED: Di-Ras2-like [Bos taurus].
Length = 199
Score = 212 bits (539), Expect = 6e-55
Identities = 106/197 (53%), Positives = 138/197 (70%), Gaps = 1/197 (0%)
Frame = +2
Query: 497 RSRDFRVVVLGSAGVGKSALVQRWVRGNFREAYLPTIEDTYRQVLGCSHKVGALHITDTT 676
+S D+RV V G+ GVGKS+LV R+V+G FRE+Y+PT+EDTYRQV+ C + L ITDTT
Sbjct: 4 QSNDYRVAVFGAGGVGKSSLVLRFVKGTFRESYIPTVEDTYRQVISCDKSICTLQITDTT 63
Query: 677 GGRRYRGLQRLAIARGHAFILVYSVTKKHTLEELKPLYHLIRELKGNNPLKCPIILVGNK 856
G ++ +QRL+I++GHAFILVYS+T + +LEELKP+Y I E+KG+ PI+LVGNK
Sbjct: 64 GSHQFPAMQRLSISKGHAFILVYSITSRQSLEELKPIYEQICEIKGDVE-SIPIMLVGNK 122
Query: 857 CDES-HREVSEKEGAACASEWNCAFLETSAKMNINVQELFQMLLNHEXXXXXXXXXXXXX 1033
CDES +REV E A +W CAF+ETSAK+N+NV+ELFQ LLN E
Sbjct: 123 CDESPNREVESSEAEVLARKWKCAFMETSAKLNLNVKELFQELLNLEKRRTVSLQIDGKK 182
Query: 1034 XXIPKTAEKLLGKCIIM 1084
K EKL GKC++M
Sbjct: 183 SKQQKRKEKLKGKCVVM 199
>ref|NP_001179871.1| ras-related protein Rap-2a [Bos taurus].
Length = 183
Score = 137 bits (346), Expect = 1e-32
Identities = 76/158 (48%), Positives = 97/158 (61%), Gaps = 1/158 (0%)
Frame = +2
Query: 503 RDFRVVVLGSAGVGKSALVQRWVRGNFREAYLPTIEDTYRQVLGCSHKVGALHITDTTGG 682
R+++VVVLGS GVGKSAL ++V G F E Y PTIED YR+ + L I DT G
Sbjct: 2 REYKVVVLGSGGVGKSALTVQFVTGTFIEKYDPTIEDFYRKEIEVDSSPSVLEILDTAGT 61
Query: 683 RRYRGLQRLAIARGHAFILVYSVTKKHTLEELKPLYHLIRELKGNNPLKCPIILVGNKCD 862
++ ++ L I G FILVYS+ + + +++KP+ I +K K P+ILVGNK D
Sbjct: 62 EQFASMRDLYIKNGQGFILVYSLVNQQSFQDIKPMRDQIIRVKRYE--KVPVILVGNKVD 119
Query: 863 -ESHREVSEKEGAACASEWNCAFLETSAKMNINVQELF 973
ES REVS EG A A EW C F+ETSAK V ELF
Sbjct: 120 LESEREVSSNEGRALAEEWGCPFMETSAKSKTMVDELF 157
>ref|XP_002692010.1| PREDICTED: RAP2A, member of RAS oncogene family-like [Bos taurus].
Length = 183
Score = 137 bits (346), Expect = 1e-32
Identities = 76/158 (48%), Positives = 97/158 (61%), Gaps = 1/158 (0%)
Frame = +2
Query: 503 RDFRVVVLGSAGVGKSALVQRWVRGNFREAYLPTIEDTYRQVLGCSHKVGALHITDTTGG 682
R+++VVVLGS GVGKSAL ++V G F E Y PTIED YR+ + L I DT G
Sbjct: 2 REYKVVVLGSGGVGKSALTVQFVTGTFIEKYDPTIEDFYRKEIEVDSSPSVLEILDTAGT 61
Query: 683 RRYRGLQRLAIARGHAFILVYSVTKKHTLEELKPLYHLIRELKGNNPLKCPIILVGNKCD 862
++ ++ L I G FILVYS+ + + +++KP+ I +K K P+ILVGNK D
Sbjct: 62 EQFASMRDLYIKNGQGFILVYSLVNQQSFQDIKPMRDQIIRVKRYE--KVPVILVGNKVD 119
Query: 863 -ESHREVSEKEGAACASEWNCAFLETSAKMNINVQELF 973
ES REVS EG A A EW C F+ETSAK V ELF
Sbjct: 120 LESEREVSSNEGRALAEEWGCPFMETSAKSKTMVDELF 157
>ref|NP_001096001.1| ras-related protein Rap-2b [Bos taurus].
Length = 183
Score = 134 bits (336), Expect = 2e-31
Identities = 74/158 (46%), Positives = 99/158 (62%), Gaps = 1/158 (0%)
Frame = +2
Query: 503 RDFRVVVLGSAGVGKSALVQRWVRGNFREAYLPTIEDTYRQVLGCSHKVGALHITDTTGG 682
R+++VVVLGS GVGKSAL ++V G+F E Y PTIED YR+ + L I DT G
Sbjct: 2 REYKVVVLGSGGVGKSALTVQFVTGSFIEKYDPTIEDFYRKEIEVDSSPSVLEILDTAGT 61
Query: 683 RRYRGLQRLAIARGHAFILVYSVTKKHTLEELKPLYHLIRELKGNNPLKCPIILVGNKCD 862
++ ++ L I G FILVYS+ + + +++KP+ I +K + P+ILVGNK D
Sbjct: 62 EQFASMRDLYIKNGQGFILVYSLVNQQSFQDIKPMRDQIIRVKRYE--RVPMILVGNKVD 119
Query: 863 -ESHREVSEKEGAACASEWNCAFLETSAKMNINVQELF 973
E REVS EG A A EW+C F+ETSAK +V ELF
Sbjct: 120 LEGEREVSFGEGKALAEEWSCPFMETSAKNKASVDELF 157
>ref|NP_001069168.1| ras-related protein Rap-2c precursor [Bos taurus].
Length = 183
Score = 133 bits (334), Expect = 3e-31
Identities = 74/158 (46%), Positives = 95/158 (60%), Gaps = 1/158 (0%)
Frame = +2
Query: 503 RDFRVVVLGSAGVGKSALVQRWVRGNFREAYLPTIEDTYRQVLGCSHKVGALHITDTTGG 682
R+++VVVLGS GVGKSAL ++V G F E Y PTIED YR+ + L I DT G
Sbjct: 2 REYKVVVLGSGGVGKSALTVQFVTGTFIEKYDPTIEDFYRKEIEVDSSPSVLEILDTAGT 61
Query: 683 RRYRGLQRLAIARGHAFILVYSVTKKHTLEELKPLYHLIRELKGNNPLKCPIILVGNKCD 862
++ ++ L I G FILVYS+ + + +++KP+ I +K K P+ILVGNK D
Sbjct: 62 EQFASMRDLYIKNGQGFILVYSLVNQQSFQDIKPMRDQIVRVKRYE--KVPLILVGNKVD 119
Query: 863 -ESHREVSEKEGAACASEWNCAFLETSAKMNINVQELF 973
E REV EG A A EW C F+ETSAK V ELF
Sbjct: 120 LEPEREVMSSEGRALAQEWGCPFMETSAKSKSMVDELF 157
>ref|NP_787018.1| ras-related protein Rap-1b precursor [Bos taurus].
Length = 184
Score = 129 bits (324), Expect = 5e-30
Identities = 73/163 (44%), Positives = 104/163 (63%), Gaps = 2/163 (1%)
Frame = +2
Query: 503 RDFRVVVLGSAGVGKSALVQRWVRGNFREAYLPTIEDTYRQVLGCSHKVGALHITDTTGG 682
R++++VVLGS GVGKSAL ++V+G F E Y PTIED+YR+ + + L I DT G
Sbjct: 2 REYKLVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDAQQCMLEILDTAGT 61
Query: 683 RRYRGLQRLAIARGHAFILVYSVTKKHTLEELKPLYHLIRELKGNNPLKCPIILVGNKCD 862
++ ++ L + G F LVYS+T + T +L+ L I +K + + P+ILVGNKCD
Sbjct: 62 EQFTAMRDLYMKNGQGFALVYSITAQSTFNDLQDLREQILRVKDTDDV--PMILVGNKCD 119
Query: 863 -ESHREVSEKEGAACASEW-NCAFLETSAKMNINVQELFQMLL 985
E R V +++G A +W NCAFLE+SAK INV E+F L+
Sbjct: 120 LEDERVVGKEQGQNLARQWNNCAFLESSAKSKINVNEIFYDLV 162
>ref|NP_776873.1| ras-related protein Rap-1A precursor [Bos taurus].
Length = 184
Score = 128 bits (322), Expect = 9e-30
Identities = 73/163 (44%), Positives = 103/163 (63%), Gaps = 2/163 (1%)
Frame = +2
Query: 503 RDFRVVVLGSAGVGKSALVQRWVRGNFREAYLPTIEDTYRQVLGCSHKVGALHITDTTGG 682
R++++VVLGS GVGKSAL ++V+G F E Y PTIED+YR+ + + L I DT G
Sbjct: 2 REYKLVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDCQQCMLEILDTAGT 61
Query: 683 RRYRGLQRLAIARGHAFILVYSVTKKHTLEELKPLYHLIRELKGNNPLKCPIILVGNKCD 862
++ ++ L + G F LVYS+T + T +L+ L I +K + P+ILVGNKCD
Sbjct: 62 EQFTAMRDLYMKNGQGFALVYSITAQSTFNDLQDLREQILRVKDTEDV--PMILVGNKCD 119
Query: 863 -ESHREVSEKEGAACASEW-NCAFLETSAKMNINVQELFQMLL 985
E R V +++G A +W NCAFLE+SAK INV E+F L+
Sbjct: 120 LEDERVVGKEQGQNLARQWCNCAFLESSAKSKINVNEIFYDLV 162
>ref|XP_002689005.1| PREDICTED: RAP1B, member of RAS oncogene family-like [Bos taurus].
Length = 184
Score = 127 bits (318), Expect = 2e-29
Identities = 71/159 (44%), Positives = 102/159 (64%), Gaps = 2/159 (1%)
Frame = +2
Query: 503 RDFRVVVLGSAGVGKSALVQRWVRGNFREAYLPTIEDTYRQVLGCSHKVGALHITDTTGG 682
R++++VVLGS GVGKSAL ++V+G F E Y PTIED+YR+ + + L I DT G
Sbjct: 2 REYKLVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDAQQCMLEILDTAGT 61
Query: 683 RRYRGLQRLAIARGHAFILVYSVTKKHTLEELKPLYHLIRELKGNNPLKCPIILVGNKCD 862
++ ++ L + G F LVYS+T + T +L+ L I +K + + P+ILVG+KCD
Sbjct: 62 EQFTAMRDLYMKNGQGFALVYSITAQSTFNDLQDLREQILRVKDTDDV--PMILVGSKCD 119
Query: 863 -ESHREVSEKEGAACASEW-NCAFLETSAKMNINVQELF 973
E R V +++G A +W NCAFLE+SAK INV E+F
Sbjct: 120 LEDERVVGKEQGQNLARQWNNCAFLESSAKSKINVNEIF 158
Database: RefSeq49_BP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 17,681,374
Number of sequences in database: 33,088
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33088
Number of Hits to DB: 43,290,154
Number of extensions: 1245460
Number of successful extensions: 6793
Number of sequences better than 1.0e-05: 149
Number of HSP's gapped: 6525
Number of HSP's successfully gapped: 150
Length of query: 391
Length of database: 17,681,374
Length adjustment: 104
Effective length of query: 287
Effective length of database: 14,240,222
Effective search space: 4086943714
Effective search space used: 4086943714
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Animal-Genome cDNA 20110601C-012728
Search to RefSeqCP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-012728
(1173 letters)
Database: RefSeq49_CP.fasta
33,336 sequences; 18,874,504 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_542186.1| PREDICTED: similar to small GTP-binding tumor s... 212 5e-55
Alignment gi|XP_541313.2| PREDICTED: similar to GTP-binding protein Di-Ra... 211 8e-55
Alignment gi|XP_851250.1| PREDICTED: similar to RAS related protein 1b [C... 129 5e-30
Alignment gi|XP_863066.1| PREDICTED: similar to Ras-related protein Rap-1... 128 9e-30
Alignment gi|XP_540344.2| PREDICTED: similar to Ras-related protein Rap-1... 128 9e-30
Alignment gi|XP_863092.1| PREDICTED: similar to Ras-related protein Rap-1... 128 1e-29
Alignment gi|XP_534168.2| PREDICTED: similar to RAP2A, member of RAS onco... 117 2e-26
Alignment gi|XP_538405.2| PREDICTED: similar to GTP-binding protein Rhes ... 110 2e-24
Alignment gi|XP_851115.1| PREDICTED: similar to Ras homolog enriched in b... 107 2e-23
Alignment gi|XP_537249.2| PREDICTED: similar to GTP-binding protein Rit1 ... 105 8e-23
>ref|XP_542186.1| PREDICTED: similar to small GTP-binding tumor suppressor 1 [Canis
familiaris].
Length = 198
Score = 212 bits (540), Expect = 5e-55
Identities = 105/196 (53%), Positives = 137/196 (69%)
Frame = +2
Query: 497 RSRDFRVVVLGSAGVGKSALVQRWVRGNFREAYLPTIEDTYRQVLGCSHKVGALHITDTT 676
+S D+RVVV G+ GVGKS+LV R+V+G FR+ Y+PTIEDTYRQV+ C V L ITDTT
Sbjct: 4 QSNDYRVVVFGAGGVGKSSLVLRFVKGTFRDTYIPTIEDTYRQVISCDKSVCTLQITDTT 63
Query: 677 GGRRYRGLQRLAIARGHAFILVYSVTKKHTLEELKPLYHLIRELKGNNPLKCPIILVGNK 856
G ++ +QRL+I++GHAFILVYS+T K +LEEL P+Y LI ++KG+ P++LVGNK
Sbjct: 64 GSHQFPAMQRLSISKGHAFILVYSITSKQSLEELGPIYKLIVQIKGSVE-DIPVMLVGNK 122
Query: 857 CDESHREVSEKEGAACASEWNCAFLETSAKMNINVQELFQMLLNHEXXXXXXXXXXXXXX 1036
CDE+ REV +E A A EW CAF+ETSAKMN NV+ELFQ LL E
Sbjct: 123 CDETQREVDTREAQAVAQEWKCAFMETSAKMNYNVKELFQELLTLETRRNMSLNIDGKRA 182
Query: 1037 XIPKTAEKLLGKCIIM 1084
K +++ GKC++M
Sbjct: 183 SKQKRTDRVKGKCVLM 198
>ref|XP_541313.2| PREDICTED: similar to GTP-binding protein Di-Ras2 (Distinct subgroup
of the Ras family member 2) [Canis familiaris].
Length = 208
Score = 211 bits (538), Expect = 8e-55
Identities = 109/209 (52%), Positives = 145/209 (69%), Gaps = 1/209 (0%)
Frame = +2
Query: 461 TVIVIRTCLPQRRSRDFRVVVLGSAGVGKSALVQRWVRGNFREAYLPTIEDTYRQVLGCS 640
T+ + + +P++ S D+RV V G+ GVGKS+LV R+V+G FRE+Y+PT+EDTYRQV+ C
Sbjct: 2 TLSELSSTMPEQ-SNDYRVAVFGAGGVGKSSLVLRFVKGTFRESYIPTVEDTYRQVISCD 60
Query: 641 HKVGALHITDTTGGRRYRGLQRLAIARGHAFILVYSVTKKHTLEELKPLYHLIRELKGNN 820
+ L ITDTTG ++ +QRL+I++GHAFILVYS+T + +LEELKP+Y I E+KG+
Sbjct: 61 KSICTLQITDTTGSHQFPAMQRLSISKGHAFILVYSITSRQSLEELKPIYEQICEIKGDV 120
Query: 821 PLKCPIILVGNKCDES-HREVSEKEGAACASEWNCAFLETSAKMNINVQELFQMLLNHEX 997
PI+LVGNKCDES +REV E A A +W CAF+ETSAK+N NV+ELFQ LLN E
Sbjct: 121 E-SIPIMLVGNKCDESPNREVESGEAEALARKWKCAFMETSAKLNHNVKELFQELLNLEK 179
Query: 998 XXXXXXXXXXXXXXIPKTAEKLLGKCIIM 1084
K EKL GKC++M
Sbjct: 180 RRTVSLQIDGKKSKQQKRKEKLKGKCVVM 208
>ref|XP_851250.1| PREDICTED: similar to RAS related protein 1b [Canis familiaris].
Length = 184
Score = 129 bits (324), Expect = 5e-30
Identities = 73/163 (44%), Positives = 104/163 (63%), Gaps = 2/163 (1%)
Frame = +2
Query: 503 RDFRVVVLGSAGVGKSALVQRWVRGNFREAYLPTIEDTYRQVLGCSHKVGALHITDTTGG 682
R++++VVLGS GVGKSAL ++V+G F E Y PTIED+YR+ + + L I DT G
Sbjct: 2 REYKLVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDAQQCMLEILDTAGT 61
Query: 683 RRYRGLQRLAIARGHAFILVYSVTKKHTLEELKPLYHLIRELKGNNPLKCPIILVGNKCD 862
++ ++ L + G F LVYS+T + T +L+ L I +K + + P+ILVGNKCD
Sbjct: 62 EQFTAMRDLYMKNGQGFALVYSITAQSTFNDLQDLREQILRVKDTDDV--PMILVGNKCD 119
Query: 863 -ESHREVSEKEGAACASEW-NCAFLETSAKMNINVQELFQMLL 985
E R V +++G A +W NCAFLE+SAK INV E+F L+
Sbjct: 120 LEDERVVGKEQGQNLARQWNNCAFLESSAKSKINVNEIFYDLV 162
>ref|XP_863066.1| PREDICTED: similar to Ras-related protein Rap-1A (Ras-related
protein Krev-1) isoform 2 [Canis familiaris].
Length = 184
Score = 128 bits (322), Expect = 9e-30
Identities = 73/163 (44%), Positives = 103/163 (63%), Gaps = 2/163 (1%)
Frame = +2
Query: 503 RDFRVVVLGSAGVGKSALVQRWVRGNFREAYLPTIEDTYRQVLGCSHKVGALHITDTTGG 682
R++++VVLGS GVGKSAL ++V+G F E Y PTIED+YR+ + + L I DT G
Sbjct: 2 REYKLVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDCQQCMLEILDTAGT 61
Query: 683 RRYRGLQRLAIARGHAFILVYSVTKKHTLEELKPLYHLIRELKGNNPLKCPIILVGNKCD 862
++ ++ L + G F LVYS+T + T +L+ L I +K + P+ILVGNKCD
Sbjct: 62 EQFTAMRDLYMKNGQGFALVYSITAQSTFNDLQDLREQILRVKDTEDV--PMILVGNKCD 119
Query: 863 -ESHREVSEKEGAACASEW-NCAFLETSAKMNINVQELFQMLL 985
E R V +++G A +W NCAFLE+SAK INV E+F L+
Sbjct: 120 LEDERVVGKEQGQNLARQWCNCAFLESSAKSKINVNEIFYDLV 162
>ref|XP_540344.2| PREDICTED: similar to Ras-related protein Rap-1A (Ras-related
protein Krev-1) isoform 1 [Canis familiaris].
Length = 184
Score = 128 bits (322), Expect = 9e-30
Identities = 73/163 (44%), Positives = 103/163 (63%), Gaps = 2/163 (1%)
Frame = +2
Query: 503 RDFRVVVLGSAGVGKSALVQRWVRGNFREAYLPTIEDTYRQVLGCSHKVGALHITDTTGG 682
R++++VVLGS GVGKSAL ++V+G F E Y PTIED+YR+ + + L I DT G
Sbjct: 2 REYKLVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDCQQCMLEILDTAGT 61
Query: 683 RRYRGLQRLAIARGHAFILVYSVTKKHTLEELKPLYHLIRELKGNNPLKCPIILVGNKCD 862
++ ++ L + G F LVYS+T + T +L+ L I +K + P+ILVGNKCD
Sbjct: 62 EQFTAMRDLYMKNGQGFALVYSITAQSTFNDLQDLREQILRVKDTEDV--PMILVGNKCD 119
Query: 863 -ESHREVSEKEGAACASEW-NCAFLETSAKMNINVQELFQMLL 985
E R V +++G A +W NCAFLE+SAK INV E+F L+
Sbjct: 120 LEDERVVGKEQGQNLARQWCNCAFLESSAKSKINVNEIFYDLV 162
>ref|XP_863092.1| PREDICTED: similar to Ras-related protein Rap-1A (Ras-related
protein Krev-1) isoform 3 [Canis familiaris].
Length = 159
Score = 128 bits (321), Expect = 1e-29
Identities = 72/159 (45%), Positives = 101/159 (63%), Gaps = 2/159 (1%)
Frame = +2
Query: 503 RDFRVVVLGSAGVGKSALVQRWVRGNFREAYLPTIEDTYRQVLGCSHKVGALHITDTTGG 682
R++++VVLGS GVGKSAL ++V+G F E Y PTIED+YR+ + + L I DT G
Sbjct: 2 REYKLVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDCQQCMLEILDTAGT 61
Query: 683 RRYRGLQRLAIARGHAFILVYSVTKKHTLEELKPLYHLIRELKGNNPLKCPIILVGNKCD 862
++ ++ L + G F LVYS+T + T +L+ L I +K + P+ILVGNKCD
Sbjct: 62 EQFTAMRDLYMKNGQGFALVYSITAQSTFNDLQDLREQILRVKDTEDV--PMILVGNKCD 119
Query: 863 -ESHREVSEKEGAACASEW-NCAFLETSAKMNINVQELF 973
E R V +++G A +W NCAFLE+SAK INV E+F
Sbjct: 120 LEDERVVGKEQGQNLARQWCNCAFLESSAKSKINVNEIF 158
>ref|XP_534168.2| PREDICTED: similar to RAP2A, member of RAS oncogene family [Canis
familiaris].
Length = 335
Score = 117 bits (293), Expect = 2e-26
Identities = 65/146 (44%), Positives = 86/146 (58%), Gaps = 1/146 (0%)
Frame = +2
Query: 539 VGKSALVQRWVRGNFREAYLPTIEDTYRQVLGCSHKVGALHITDTTGGRRYRGLQRLAIA 718
V KS +++++V G F E Y PTIED YR+ + L I DT G ++ ++ L I
Sbjct: 166 VVKSTIIRQFVTGTFIEKYDPTIEDFYRKEIEVDSSPSVLEILDTAGTEQFASMRDLYIK 225
Query: 719 RGHAFILVYSVTKKHTLEELKPLYHLIRELKGNNPLKCPIILVGNKCD-ESHREVSEKEG 895
G FILVYS+ + + +++KP+ I +K K P+ILVGNK D ES REVS EG
Sbjct: 226 NGQGFILVYSLVNQQSFQDIKPMRDQIIRVKRYE--KVPVILVGNKVDLESEREVSSNEG 283
Query: 896 AACASEWNCAFLETSAKMNINVQELF 973
A A EW C F+ETSAK V ELF
Sbjct: 284 RALAEEWGCPFMETSAKSKTMVDELF 309
>ref|XP_538405.2| PREDICTED: similar to GTP-binding protein Rhes (Ras homolog
enriched in striatum) (Tumor endothelial marker 2)
[Canis familiaris].
Length = 561
Score = 110 bits (276), Expect = 2e-24
Identities = 64/169 (37%), Positives = 97/169 (57%), Gaps = 9/169 (5%)
Frame = +2
Query: 509 FRVVVLGSAGVGKSALVQRWVRGNFREAYLPTIEDTYRQVLGCSHKVGALHITDTTGGRR 688
+R+VVLG++ VGKS++V R++ G F + Y PTIED +R+V + L I DT+G
Sbjct: 315 YRMVVLGASRVGKSSIVSRFLNGRFEDQYTPTIEDFHRKVYNIRGDMYQLDILDTSGNHP 374
Query: 689 YRGLQRLAIARGHAFILVYSVTKKHTLEELKPLYHLIRELKG------NNPLKCPIILVG 850
+ ++RL+I G FILV+S+ + + +E+K L I E+K + P+++ G
Sbjct: 375 FPAMRRLSILTGDVFILVFSLDNRESFDEVKRLQKQILEVKSCLKNKTKEAAELPMVICG 434
Query: 851 NKCDESH--REVSEKEGAACAS-EWNCAFLETSAKMNINVQELFQMLLN 988
NK D S R+V E S + NCA+ E SAK N NV E+F L +
Sbjct: 435 NKNDHSELCRQVPSTEAELLVSGDENCAYFEVSAKKNTNVDEMFYGLFS 483
>ref|XP_851115.1| PREDICTED: similar to Ras homolog enriched in brain like 1 [Canis
familiaris].
Length = 183
Score = 107 bits (268), Expect = 2e-23
Identities = 59/159 (37%), Positives = 88/159 (55%), Gaps = 1/159 (0%)
Frame = +2
Query: 512 RVVVLGSAGVGKSALVQRWVRGNFREAYLPTIEDTYRQVLGCSHKVGALHITDTTGGRRY 691
+VV+LG VGK++L ++V G F E Y PT+E+TY +++ LH+ DT G Y
Sbjct: 8 KVVILGYRSVGKTSLAHQFVEGEFLEGYDPTVENTYSKIVTLGKDEFHLHLVDTAGQDEY 67
Query: 692 RGLQRLAIARGHAFILVYSVTKKHTLEELKPLYHLIRELKGNNPLKCPIILVGNKCDES- 868
L I H ++LVYSVT H+ + + LY + E G+ + P++LVGNK D S
Sbjct: 68 SILPYSFIIGVHGYVLVYSVTSLHSFQVIASLYQKLHE--GHGKTRLPVVLVGNKADLSP 125
Query: 869 HREVSEKEGAACASEWNCAFLETSAKMNINVQELFQMLL 985
REV EG A W F+E+SA+ N + +F ++
Sbjct: 126 DREVQAVEGKKLAESWGATFMESSARENQLTRGIFTKVI 164
>ref|XP_537249.2| PREDICTED: similar to GTP-binding protein Rit1 (Ras-like protein
expressed in many tissues) (Ras-like without CAAX
protein 1) [Canis familiaris].
Length = 219
Score = 105 bits (262), Expect = 8e-23
Identities = 56/167 (33%), Positives = 96/167 (57%), Gaps = 1/167 (0%)
Frame = +2
Query: 488 PQRRSRDFRVVVLGSAGVGKSALVQRWVRGNFREAYLPTIEDTYRQVLGCSHKVGALHIT 667
P SR++++V+LG+ GVGKSA+ +++ F E + PTIED Y+ + + L I
Sbjct: 15 PASLSREYKLVMLGAGGVGKSAMTMQFISHRFPEDHDPTIEDAYKIRIRIDDEPANLDIL 74
Query: 668 DTTGGRRYRGLQRLAIARGHAFILVYSVTKKHTLEELKPLYHLIRELKGNNPLKCPIILV 847
DT G + ++ + G FI+ YS+T + + E++ LI ++ + P++LV
Sbjct: 75 DTAGQAEFTAMRDQYMRAGEGFIICYSITDRRSFHEVREFKQLIYRVRRTD--DTPVVLV 132
Query: 848 GNKCD-ESHREVSEKEGAACASEWNCAFLETSAKMNINVQELFQMLL 985
GNK D + R+V+++EG A A E++C F ETSA + ++F L+
Sbjct: 133 GNKSDLKQLRQVTKEEGLALAREFSCPFFETSAAYRYYIDDVFHALV 179
Database: RefSeq49_CP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,874,504
Number of sequences in database: 33,336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33336
Number of Hits to DB: 45,215,479
Number of extensions: 1281154
Number of successful extensions: 6663
Number of sequences better than 1.0e-05: 131
Number of HSP's gapped: 6482
Number of HSP's successfully gapped: 132
Length of query: 391
Length of database: 18,874,504
Length adjustment: 105
Effective length of query: 286
Effective length of database: 15,374,224
Effective search space: 4397028064
Effective search space used: 4397028064
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to RefSeqSP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-012728
(1173 letters)
Database: RefSeq49_SP.fasta
24,897 sequences; 11,343,932 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001038063.1| GTP-binding protein Di-Ras3 [Sus scrofa]. 427 e-120
Alignment gi|XP_003123080.2| PREDICTED: GTP-binding protein Di-Ras1-like ... 211 5e-55
Alignment gi|NP_001072150.1| DIRAS family protein [Sus scrofa]. 209 2e-54
Alignment gi|XP_003135269.1| PREDICTED: LOW QUALITY PROTEIN: GTP-binding ... 173 1e-43
Alignment gi|NP_001116657.1| ras-related protein Rap-2a precursor [Sus sc... 134 1e-31
Alignment gi|XP_003135433.2| PREDICTED: ras-related protein Rap-2c-like [... 133 2e-31
Alignment gi|XP_003361755.1| PREDICTED: ras-related protein Rap-1b [Sus s... 129 3e-30
Alignment gi|XP_003355289.1| PREDICTED: ras-related protein Rap-1A isofor... 128 5e-30
Alignment gi|XP_001928684.1| PREDICTED: ras-related protein Rap-1A isofor... 128 5e-30
Alignment gi|XP_003355422.1| PREDICTED: GTPase RhebL1-like [Sus scrofa]. 108 4e-24
>ref|NP_001038063.1| GTP-binding protein Di-Ras3 [Sus scrofa].
Length = 228
Score = 427 bits (1099), Expect = e-120
Identities = 213/228 (93%), Positives = 213/228 (93%)
Frame = +2
Query: 401 MGNSCFGLKERLMKRLRPLPTVIVIRTCLPQRRSRDFRVVVLGSAGVGKSALVQRWVRGN 580
MGNSCFGLKERLMKRLRPLPTVIVIRTCLPQRRSRDFRVVVLGSAGVGKSALVQRWVRGN
Sbjct: 1 MGNSCFGLKERLMKRLRPLPTVIVIRTCLPQRRSRDFRVVVLGSAGVGKSALVQRWVRGN 60
Query: 581 FREAYLPTIEDTYRQVLGCSHKVGALHITDTTGGRRYRGLQRLAIARGHAFILVYSVTKK 760
FREAYLPTIEDTYRQVLGCSHKVGALHITDTTGGRRYRGLQRLAIARGHAFILVYSVTKK
Sbjct: 61 FREAYLPTIEDTYRQVLGCSHKVGALHITDTTGGRRYRGLQRLAIARGHAFILVYSVTKK 120
Query: 761 HTLEELKPLYHLIRELKGNNPLKCPIILVGNKCDESHREVSEKEGAACASEWNCAFLETS 940
HTLEELKPLYHLIRELKGNNPLKCPIILVGNKCDESHREVSEKEGAACASEWNCAFLETS
Sbjct: 121 HTLEELKPLYHLIRELKGNNPLKCPIILVGNKCDESHREVSEKEGAACASEWNCAFLETS 180
Query: 941 AKMNINVQELFQMLLNHEXXXXXXXXXXXXXXXIPKTAEKLLGKCIIM 1084
AKMNINVQELFQMLLNHE IPKTAEKLLGKCIIM
Sbjct: 181 AKMNINVQELFQMLLNHEKKPAASAQPAQKKSQIPKTAEKLLGKCIIM 228
>ref|XP_003123080.2| PREDICTED: GTP-binding protein Di-Ras1-like [Sus scrofa].
Length = 198
Score = 211 bits (538), Expect = 5e-55
Identities = 105/196 (53%), Positives = 137/196 (69%)
Frame = +2
Query: 497 RSRDFRVVVLGSAGVGKSALVQRWVRGNFREAYLPTIEDTYRQVLGCSHKVGALHITDTT 676
+S D+RVVV G+ GVGKS+LV R+V+G FR+ Y+PTIEDTYRQV+ C V L ITDTT
Sbjct: 4 QSNDYRVVVFGAGGVGKSSLVLRFVKGTFRDTYIPTIEDTYRQVISCDKSVCTLQITDTT 63
Query: 677 GGRRYRGLQRLAIARGHAFILVYSVTKKHTLEELKPLYHLIRELKGNNPLKCPIILVGNK 856
G ++ +QRL+I++GHAFILV+SVT K +LEEL P+Y LI ++KG+ P++LVGNK
Sbjct: 64 GSHQFPAMQRLSISKGHAFILVFSVTSKQSLEELGPIYKLIVQIKGSVE-DIPVMLVGNK 122
Query: 857 CDESHREVSEKEGAACASEWNCAFLETSAKMNINVQELFQMLLNHEXXXXXXXXXXXXXX 1036
CDE+ REV +E A A EW CAF+ETSAKMN NV+ELFQ LL E
Sbjct: 123 CDETQREVDTREAQAVAQEWKCAFMETSAKMNYNVKELFQELLTLETRRNMSLNIDGKRS 182
Query: 1037 XIPKTAEKLLGKCIIM 1084
K +++ GKC++M
Sbjct: 183 SKQKRTDRIKGKCVLM 198
>ref|NP_001072150.1| DIRAS family protein [Sus scrofa].
Length = 199
Score = 209 bits (533), Expect = 2e-54
Identities = 107/197 (54%), Positives = 137/197 (69%), Gaps = 1/197 (0%)
Frame = +2
Query: 497 RSRDFRVVVLGSAGVGKSALVQRWVRGNFREAYLPTIEDTYRQVLGCSHKVGALHITDTT 676
+S D+RV V G+ GVGK +LV R+V+G FRE+Y+PT+EDTYRQV+ C + L ITDTT
Sbjct: 4 QSNDYRVAVFGAGGVGKISLVLRFVKGTFRESYIPTVEDTYRQVISCDKSICTLQITDTT 63
Query: 677 GGRRYRGLQRLAIARGHAFILVYSVTKKHTLEELKPLYHLIRELKGNNPLKCPIILVGNK 856
G ++ +QRL+I++GHAFILVYS+T + +LEELKP+Y I E+KG+ PI+LVGNK
Sbjct: 64 GSHQFPAMQRLSISKGHAFILVYSITSRQSLEELKPIYEQICEIKGDVE-SIPIMLVGNK 122
Query: 857 CDES-HREVSEKEGAACASEWNCAFLETSAKMNINVQELFQMLLNHEXXXXXXXXXXXXX 1033
CDES +REV E A A +W CAF+ETSAK+N NV+ELFQ LLN E
Sbjct: 123 CDESPNREVESSEAEALARKWKCAFMETSAKLNHNVKELFQELLNLEKRRTVSLQIDGKK 182
Query: 1034 XXIPKTAEKLLGKCIIM 1084
K EKL GKC+IM
Sbjct: 183 SKQQKRKEKLKGKCVIM 199
>ref|XP_003135269.1| PREDICTED: LOW QUALITY PROTEIN: GTP-binding protein Di-Ras3 [Sus
scrofa].
Length = 214
Score = 173 bits (439), Expect = 1e-43
Identities = 108/184 (58%), Positives = 117/184 (63%), Gaps = 4/184 (2%)
Frame = +2
Query: 545 KSALVQRWVRGN----FREAYLPTIEDTYRQVLGCSHKVGALHITDTTGGRRYRGLQRLA 712
KSA V RG F YL TI+DTY QV SHKVG LHIT+TTG Y LQ L
Sbjct: 39 KSADVVAAARGRYTATFMRHYLLTIQDTYCQVXAYSHKVGMLHITNTTGSSCYWTLQHLT 98
Query: 713 IARGHAFILVYSVTKKHTLEELKPLYHLIRELKGNNPLKCPIILVGNKCDESHREVSEKE 892
+ARGH FI VYSVTKK LEEL P Y LI E+KGNN K PII V NKC+ES +EV+E
Sbjct: 99 VARGHTFIHVYSVTKKQILEELNPXYELIFEIKGNNLKKYPIIXVSNKCNESXQEVNE-- 156
Query: 893 GAACASEWNCAFLETSAKMNINVQELFQMLLNHEXXXXXXXXXXXXXXXIPKTAEKLLGK 1072
CA EWNC FLETSA +NINVQ Q LLNH I KTA+KLLGK
Sbjct: 157 --XCALEWNCTFLETSAXININVQ---QXLLNH-XKNPTAGAQPXKKSQIFKTAKKLLGK 210
Query: 1073 CIIM 1084
CIIM
Sbjct: 211 CIIM 214
>ref|NP_001116657.1| ras-related protein Rap-2a precursor [Sus scrofa].
Length = 183
Score = 134 bits (337), Expect = 1e-31
Identities = 74/158 (46%), Positives = 99/158 (62%), Gaps = 1/158 (0%)
Frame = +2
Query: 503 RDFRVVVLGSAGVGKSALVQRWVRGNFREAYLPTIEDTYRQVLGCSHKVGALHITDTTGG 682
R+++VVVLGS GVGKSAL ++V G+F E Y PTIED YR+ + L I DT G
Sbjct: 2 REYKVVVLGSGGVGKSALTVQFVTGSFIEKYDPTIEDFYRKEIEVDSSPSVLEILDTAGT 61
Query: 683 RRYRGLQRLAIARGHAFILVYSVTKKHTLEELKPLYHLIRELKGNNPLKCPIILVGNKCD 862
++ ++ L I G FILVYS+ + + +++KP+ I +K + P+ILVGNK D
Sbjct: 62 EQFASMRDLYIKNGQGFILVYSLVNQQSFQDIKPMRDQIIRVKRYE--RVPMILVGNKVD 119
Query: 863 -ESHREVSEKEGAACASEWNCAFLETSAKMNINVQELF 973
E REVS EG A A EW+C F+ETSAK +V ELF
Sbjct: 120 LEGEREVSYGEGKALAEEWSCPFMETSAKNKASVDELF 157
>ref|XP_003135433.2| PREDICTED: ras-related protein Rap-2c-like [Sus scrofa].
Length = 183
Score = 133 bits (334), Expect = 2e-31
Identities = 74/158 (46%), Positives = 95/158 (60%), Gaps = 1/158 (0%)
Frame = +2
Query: 503 RDFRVVVLGSAGVGKSALVQRWVRGNFREAYLPTIEDTYRQVLGCSHKVGALHITDTTGG 682
R+++VVVLGS GVGKSAL ++V G F E Y PTIED YR+ + L I DT G
Sbjct: 2 REYKVVVLGSGGVGKSALTVQFVTGTFIEKYDPTIEDFYRKEIEVDSSPSVLEILDTAGT 61
Query: 683 RRYRGLQRLAIARGHAFILVYSVTKKHTLEELKPLYHLIRELKGNNPLKCPIILVGNKCD 862
++ ++ L I G FILVYS+ + + +++KP+ I +K K P+ILVGNK D
Sbjct: 62 EQFASMRDLYIKNGQGFILVYSLVNQQSFQDIKPMRDQIVRVKRYE--KVPLILVGNKVD 119
Query: 863 -ESHREVSEKEGAACASEWNCAFLETSAKMNINVQELF 973
E REV EG A A EW C F+ETSAK V ELF
Sbjct: 120 LEPEREVMSSEGRALAQEWGCPFMETSAKSKSMVDELF 157
>ref|XP_003361755.1| PREDICTED: ras-related protein Rap-1b [Sus scrofa].
Length = 184
Score = 129 bits (324), Expect = 3e-30
Identities = 73/163 (44%), Positives = 104/163 (63%), Gaps = 2/163 (1%)
Frame = +2
Query: 503 RDFRVVVLGSAGVGKSALVQRWVRGNFREAYLPTIEDTYRQVLGCSHKVGALHITDTTGG 682
R++++VVLGS GVGKSAL ++V+G F E Y PTIED+YR+ + + L I DT G
Sbjct: 2 REYKLVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDAQQCMLEILDTAGT 61
Query: 683 RRYRGLQRLAIARGHAFILVYSVTKKHTLEELKPLYHLIRELKGNNPLKCPIILVGNKCD 862
++ ++ L + G F LVYS+T + T +L+ L I +K + + P+ILVGNKCD
Sbjct: 62 EQFTAMRDLYMKNGQGFALVYSITAQSTFNDLQDLREQILRVKDTDDV--PMILVGNKCD 119
Query: 863 -ESHREVSEKEGAACASEW-NCAFLETSAKMNINVQELFQMLL 985
E R V +++G A +W NCAFLE+SAK INV E+F L+
Sbjct: 120 LEDERVVGKEQGQNLARQWNNCAFLESSAKSKINVNEIFYDLV 162
>ref|XP_003355289.1| PREDICTED: ras-related protein Rap-1A isoform 2 [Sus scrofa].
Length = 184
Score = 128 bits (322), Expect = 5e-30
Identities = 73/163 (44%), Positives = 103/163 (63%), Gaps = 2/163 (1%)
Frame = +2
Query: 503 RDFRVVVLGSAGVGKSALVQRWVRGNFREAYLPTIEDTYRQVLGCSHKVGALHITDTTGG 682
R++++VVLGS GVGKSAL ++V+G F E Y PTIED+YR+ + + L I DT G
Sbjct: 2 REYKLVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDCQQCMLEILDTAGT 61
Query: 683 RRYRGLQRLAIARGHAFILVYSVTKKHTLEELKPLYHLIRELKGNNPLKCPIILVGNKCD 862
++ ++ L + G F LVYS+T + T +L+ L I +K + P+ILVGNKCD
Sbjct: 62 EQFTAMRDLYMKNGQGFALVYSITAQSTFNDLQDLREQILRVKDTEDV--PMILVGNKCD 119
Query: 863 -ESHREVSEKEGAACASEW-NCAFLETSAKMNINVQELFQMLL 985
E R V +++G A +W NCAFLE+SAK INV E+F L+
Sbjct: 120 LEDERVVGKEQGQNLARQWCNCAFLESSAKSKINVNEIFYDLV 162
>ref|XP_001928684.1| PREDICTED: ras-related protein Rap-1A isoform 1 [Sus scrofa].
Length = 184
Score = 128 bits (322), Expect = 5e-30
Identities = 73/163 (44%), Positives = 103/163 (63%), Gaps = 2/163 (1%)
Frame = +2
Query: 503 RDFRVVVLGSAGVGKSALVQRWVRGNFREAYLPTIEDTYRQVLGCSHKVGALHITDTTGG 682
R++++VVLGS GVGKSAL ++V+G F E Y PTIED+YR+ + + L I DT G
Sbjct: 2 REYKLVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDCQQCMLEILDTAGT 61
Query: 683 RRYRGLQRLAIARGHAFILVYSVTKKHTLEELKPLYHLIRELKGNNPLKCPIILVGNKCD 862
++ ++ L + G F LVYS+T + T +L+ L I +K + P+ILVGNKCD
Sbjct: 62 EQFTAMRDLYMKNGQGFALVYSITAQSTFNDLQDLREQILRVKDTEDV--PMILVGNKCD 119
Query: 863 -ESHREVSEKEGAACASEW-NCAFLETSAKMNINVQELFQMLL 985
E R V +++G A +W NCAFLE+SAK INV E+F L+
Sbjct: 120 LEDERVVGKEQGQNLARQWCNCAFLESSAKSKINVNEIFYDLV 162
>ref|XP_003355422.1| PREDICTED: GTPase RhebL1-like [Sus scrofa].
Length = 183
Score = 108 bits (271), Expect = 4e-24
Identities = 60/159 (37%), Positives = 89/159 (55%), Gaps = 1/159 (0%)
Frame = +2
Query: 512 RVVVLGSAGVGKSALVQRWVRGNFREAYLPTIEDTYRQVLGCSHKVGALHITDTTGGRRY 691
+VV+LG VGK++L ++V G F E Y PT+E+TY +++ LH+ DT G Y
Sbjct: 8 KVVILGYRSVGKTSLAHQFVEGEFLEDYDPTVENTYSKIVTLGKDEFHLHLVDTAGQDEY 67
Query: 692 RGLQRLAIARGHAFILVYSVTKKHTLEELKPLYHLIRELKGNNPLKCPIILVGNKCDES- 868
L I H ++LVYSVT H+ + ++ LY + E G+ + P++LVGNK D S
Sbjct: 68 SILPYSFIIGVHGYVLVYSVTSLHSFQVIESLYQKLHE--GHGKTRLPVVLVGNKADLSP 125
Query: 869 HREVSEKEGAACASEWNCAFLETSAKMNINVQELFQMLL 985
REV EG A W F+E+SA+ N Q +F ++
Sbjct: 126 DREVQAVEGKKLAESWGATFMESSARDNQLTQGIFTKVI 164
Database: RefSeq49_SP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 11,343,932
Number of sequences in database: 24,897
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 24897
Number of Hits to DB: 28,008,681
Number of extensions: 805928
Number of successful extensions: 4493
Number of sequences better than 1.0e-05: 108
Number of HSP's gapped: 4317
Number of HSP's successfully gapped: 109
Length of query: 391
Length of database: 11,343,932
Length adjustment: 101
Effective length of query: 290
Effective length of database: 8,829,335
Effective search space: 2560507150
Effective search space used: 2560507150
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)
Search to RefSeqMP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-012728
(1173 letters)
Database: RefSeq49_MP.fasta
30,036 sequences; 15,617,559 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_660252.1| GTP-binding protein Di-Ras1 [Mus musculus]. 211 9e-55
Alignment gi|NP_001019645.1| GTP-binding protein Di-Ras2 [Mus musculus]. 211 1e-54
Alignment gi|NP_083795.2| ras-related protein Rap-2a precursor [Mus muscu... 137 1e-32
Alignment gi|NP_082988.1| ras-related protein Rap-2b precursor [Mus muscu... 134 1e-31
Alignment gi|NP_766001.1| ras-related protein Rap-2c precursor [Mus muscu... 133 3e-31
Alignment gi|NP_077777.1| ras-related protein Rap-1b precursor [Mus muscu... 129 4e-30
Alignment gi|NP_663516.1| ras-related protein Rap-1A precursor [Mus muscu... 128 8e-30
Alignment gi|NP_083458.1| GTP-binding protein Rhes precursor [Mus musculu... 112 7e-25
Alignment gi|NP_033091.1| GTP-binding protein Rit2 [Mus musculus]. 112 7e-25
Alignment gi|NP_033095.1| GTP-binding protein Rit1 isoform 1 [Mus musculu... 105 7e-23
>ref|NP_660252.1| GTP-binding protein Di-Ras1 [Mus musculus].
Length = 198
Score = 211 bits (537), Expect = 9e-55
Identities = 106/196 (54%), Positives = 137/196 (69%)
Frame = +2
Query: 497 RSRDFRVVVLGSAGVGKSALVQRWVRGNFREAYLPTIEDTYRQVLGCSHKVGALHITDTT 676
+S D+RVVV G+ GVGKS+LV R+V+G FR+ Y+PTIEDTYRQV+ C V L ITDTT
Sbjct: 4 QSNDYRVVVFGAGGVGKSSLVLRFVKGTFRDTYIPTIEDTYRQVISCDKSVCTLQITDTT 63
Query: 677 GGRRYRGLQRLAIARGHAFILVYSVTKKHTLEELKPLYHLIRELKGNNPLKCPIILVGNK 856
G ++ +QRL+I++GHAFILV+SVT K +L+EL P+Y LI ++KG+ PI+LVGNK
Sbjct: 64 GSHQFPAMQRLSISKGHAFILVFSVTSKQSLDELSPIYKLIVQIKGSVE-DIPIMLVGNK 122
Query: 857 CDESHREVSEKEGAACASEWNCAFLETSAKMNINVQELFQMLLNHEXXXXXXXXXXXXXX 1036
CDE+ REV +E A A EW CAF+ETSAKMN NV+ELFQ LL E
Sbjct: 123 CDETQREVHTREAQAVAQEWKCAFMETSAKMNYNVKELFQELLTLETRRSVSLSVDGKRS 182
Query: 1037 XIPKTAEKLLGKCIIM 1084
K A+++ GKC +M
Sbjct: 183 SKQKRADRIKGKCALM 198
>ref|NP_001019645.1| GTP-binding protein Di-Ras2 [Mus musculus].
Length = 199
Score = 211 bits (536), Expect = 1e-54
Identities = 107/197 (54%), Positives = 137/197 (69%), Gaps = 1/197 (0%)
Frame = +2
Query: 497 RSRDFRVVVLGSAGVGKSALVQRWVRGNFREAYLPTIEDTYRQVLGCSHKVGALHITDTT 676
+S D+RV V G+ GVGKS+LV R+V+G FRE+Y+PT+EDTYRQV+ C + L ITDTT
Sbjct: 4 QSNDYRVAVFGAGGVGKSSLVLRFVKGTFRESYIPTVEDTYRQVISCDKSICTLQITDTT 63
Query: 677 GGRRYRGLQRLAIARGHAFILVYSVTKKHTLEELKPLYHLIRELKGNNPLKCPIILVGNK 856
G ++ +QRL+I++GHAFILVYS+T + +LEELKP+Y I E+KG+ PI+LVGNK
Sbjct: 64 GSHQFPAMQRLSISKGHAFILVYSITSRQSLEELKPIYEQICEIKGDVE-SIPIMLVGNK 122
Query: 857 CDES-HREVSEKEGAACASEWNCAFLETSAKMNINVQELFQMLLNHEXXXXXXXXXXXXX 1033
CDES +REV E A A W CAF+ETSAK+N NV+ELFQ LLN E
Sbjct: 123 CDESPNREVQSSEAEALARTWKCAFMETSAKLNHNVKELFQELLNLEKRRTVSLQIDGKK 182
Query: 1034 XXIPKTAEKLLGKCIIM 1084
K EKL GKC++M
Sbjct: 183 SKQQKRKEKLKGKCVVM 199
>ref|NP_083795.2| ras-related protein Rap-2a precursor [Mus musculus].
Length = 183
Score = 137 bits (346), Expect = 1e-32
Identities = 76/158 (48%), Positives = 97/158 (61%), Gaps = 1/158 (0%)
Frame = +2
Query: 503 RDFRVVVLGSAGVGKSALVQRWVRGNFREAYLPTIEDTYRQVLGCSHKVGALHITDTTGG 682
R+++VVVLGS GVGKSAL ++V G F E Y PTIED YR+ + L I DT G
Sbjct: 2 REYKVVVLGSGGVGKSALTVQFVTGTFIEKYDPTIEDFYRKEIEVDSSPSVLEILDTAGT 61
Query: 683 RRYRGLQRLAIARGHAFILVYSVTKKHTLEELKPLYHLIRELKGNNPLKCPIILVGNKCD 862
++ ++ L I G FILVYS+ + + +++KP+ I +K K P+ILVGNK D
Sbjct: 62 EQFASMRDLYIKNGQGFILVYSLVNQQSFQDIKPMRDQIIRVKRYE--KVPVILVGNKVD 119
Query: 863 -ESHREVSEKEGAACASEWNCAFLETSAKMNINVQELF 973
ES REVS EG A A EW C F+ETSAK V ELF
Sbjct: 120 LESEREVSSNEGRALAEEWGCPFMETSAKSKTMVDELF 157
>ref|NP_082988.1| ras-related protein Rap-2b precursor [Mus musculus].
Length = 183
Score = 134 bits (337), Expect = 1e-31
Identities = 74/158 (46%), Positives = 99/158 (62%), Gaps = 1/158 (0%)
Frame = +2
Query: 503 RDFRVVVLGSAGVGKSALVQRWVRGNFREAYLPTIEDTYRQVLGCSHKVGALHITDTTGG 682
R+++VVVLGS GVGKSAL ++V G+F E Y PTIED YR+ + L I DT G
Sbjct: 2 REYKVVVLGSGGVGKSALTVQFVTGSFIEKYDPTIEDFYRKEIEVDSSPSVLEILDTAGT 61
Query: 683 RRYRGLQRLAIARGHAFILVYSVTKKHTLEELKPLYHLIRELKGNNPLKCPIILVGNKCD 862
++ ++ L I G FILVYS+ + + +++KP+ I +K + P+ILVGNK D
Sbjct: 62 EQFASMRDLYIKNGQGFILVYSLVNQQSFQDIKPMRDQIIRVKRYE--RVPMILVGNKVD 119
Query: 863 -ESHREVSEKEGAACASEWNCAFLETSAKMNINVQELF 973
E REVS EG A A EW+C F+ETSAK +V ELF
Sbjct: 120 LEGEREVSYGEGKALAEEWSCPFMETSAKNKASVDELF 157
>ref|NP_766001.1| ras-related protein Rap-2c precursor [Mus musculus].
Length = 183
Score = 133 bits (334), Expect = 3e-31
Identities = 74/158 (46%), Positives = 95/158 (60%), Gaps = 1/158 (0%)
Frame = +2
Query: 503 RDFRVVVLGSAGVGKSALVQRWVRGNFREAYLPTIEDTYRQVLGCSHKVGALHITDTTGG 682
R+++VVVLGS GVGKSAL ++V G F E Y PTIED YR+ + L I DT G
Sbjct: 2 REYKVVVLGSGGVGKSALTVQFVTGTFIEKYDPTIEDFYRKEIEVDSSPSVLEILDTAGT 61
Query: 683 RRYRGLQRLAIARGHAFILVYSVTKKHTLEELKPLYHLIRELKGNNPLKCPIILVGNKCD 862
++ ++ L I G FILVYS+ + + +++KP+ I +K K P+ILVGNK D
Sbjct: 62 EQFASMRDLYIKNGQGFILVYSLVNQQSFQDIKPMRDQIVRVKRYE--KVPLILVGNKVD 119
Query: 863 -ESHREVSEKEGAACASEWNCAFLETSAKMNINVQELF 973
E REV EG A A EW C F+ETSAK V ELF
Sbjct: 120 LEPEREVMSSEGRALAQEWGCPFMETSAKSKSMVDELF 157
>ref|NP_077777.1| ras-related protein Rap-1b precursor [Mus musculus].
Length = 184
Score = 129 bits (324), Expect = 4e-30
Identities = 73/163 (44%), Positives = 104/163 (63%), Gaps = 2/163 (1%)
Frame = +2
Query: 503 RDFRVVVLGSAGVGKSALVQRWVRGNFREAYLPTIEDTYRQVLGCSHKVGALHITDTTGG 682
R++++VVLGS GVGKSAL ++V+G F E Y PTIED+YR+ + + L I DT G
Sbjct: 2 REYKLVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDAQQCMLEILDTAGT 61
Query: 683 RRYRGLQRLAIARGHAFILVYSVTKKHTLEELKPLYHLIRELKGNNPLKCPIILVGNKCD 862
++ ++ L + G F LVYS+T + T +L+ L I +K + + P+ILVGNKCD
Sbjct: 62 EQFTAMRDLYMKNGQGFALVYSITAQSTFNDLQDLREQILRVKDTDDV--PMILVGNKCD 119
Query: 863 -ESHREVSEKEGAACASEW-NCAFLETSAKMNINVQELFQMLL 985
E R V +++G A +W NCAFLE+SAK INV E+F L+
Sbjct: 120 LEDERVVGKEQGQNLARQWNNCAFLESSAKSKINVNEIFYDLV 162
>ref|NP_663516.1| ras-related protein Rap-1A precursor [Mus musculus].
Length = 184
Score = 128 bits (322), Expect = 8e-30
Identities = 73/163 (44%), Positives = 103/163 (63%), Gaps = 2/163 (1%)
Frame = +2
Query: 503 RDFRVVVLGSAGVGKSALVQRWVRGNFREAYLPTIEDTYRQVLGCSHKVGALHITDTTGG 682
R++++VVLGS GVGKSAL ++V+G F E Y PTIED+YR+ + + L I DT G
Sbjct: 2 REYKLVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDCQQCMLEILDTAGT 61
Query: 683 RRYRGLQRLAIARGHAFILVYSVTKKHTLEELKPLYHLIRELKGNNPLKCPIILVGNKCD 862
++ ++ L + G F LVYS+T + T +L+ L I +K + P+ILVGNKCD
Sbjct: 62 EQFTAMRDLYMKNGQGFALVYSITAQSTFNDLQDLREQILRVKDTEDV--PMILVGNKCD 119
Query: 863 -ESHREVSEKEGAACASEW-NCAFLETSAKMNINVQELFQMLL 985
E R V +++G A +W NCAFLE+SAK INV E+F L+
Sbjct: 120 LEDERVVGKEQGQNLARQWCNCAFLESSAKSKINVNEIFYDLV 162
>ref|NP_083458.1| GTP-binding protein Rhes precursor [Mus musculus].
Length = 266
Score = 112 bits (279), Expect = 7e-25
Identities = 64/169 (37%), Positives = 98/169 (57%), Gaps = 9/169 (5%)
Frame = +2
Query: 509 FRVVVLGSAGVGKSALVQRWVRGNFREAYLPTIEDTYRQVLGCSHKVGALHITDTTGGRR 688
+R+VVLG++ VGKS++V R++ G F + Y PTIED +R+V + L I DT+G
Sbjct: 20 YRMVVLGASRVGKSSIVSRFLNGRFEDQYTPTIEDFHRKVYNIHGDMYQLDILDTSGNHP 79
Query: 689 YRGLQRLAIARGHAFILVYSVTKKHTLEELKPLYHLIRELKG------NNPLKCPIILVG 850
+ ++RL+I G FILV+S+ + + +E+K L I E+K + P+++ G
Sbjct: 80 FPAMRRLSILTGDVFILVFSLDSRESFDEVKRLQKQILEVKSCLKNKTKEAAELPMVICG 139
Query: 851 NKCDESH--REVSEKEGAACAS-EWNCAFLETSAKMNINVQELFQMLLN 988
NK D S R+V E S + NCA+ E SAK N NV E+F +L +
Sbjct: 140 NKNDHSELCRQVPAMEAELLVSGDENCAYFEVSAKKNTNVNEMFYVLFS 188
>ref|NP_033091.1| GTP-binding protein Rit2 [Mus musculus].
Length = 217
Score = 112 bits (279), Expect = 7e-25
Identities = 59/163 (36%), Positives = 97/163 (59%), Gaps = 1/163 (0%)
Frame = +2
Query: 500 SRDFRVVVLGSAGVGKSALVQRWVRGNFREAYLPTIEDTYRQVLGCSHKVGALHITDTTG 679
SR+++VV+LG+ GVGKSA+ +++ F + + PTIED Y+ + ++ L I DT G
Sbjct: 18 SREYKVVMLGAGGVGKSAVTMQFISHQFPDYHDPTIEDAYKTQVRIDNEPAYLDILDTAG 77
Query: 680 GRRYRGLQRLAIARGHAFILVYSVTKKHTLEELKPLYHLIRELKGNNPLKCPIILVGNKC 859
+ ++ + G FI+ YSVT + + +E LI +++ + + P++LVGNK
Sbjct: 78 QAEFTAMREQYMRGGEGFIICYSVTDRQSFQEAAKFKELIFQVR--HTYEIPLVLVGNKI 135
Query: 860 D-ESHREVSEKEGAACASEWNCAFLETSAKMNINVQELFQMLL 985
D E R+VS +EG A ++NCAF ETSA + + + FQ L+
Sbjct: 136 DLEQFRQVSTEEGMNLARDYNCAFFETSAALRFGIDDAFQGLV 178
>ref|NP_033095.1| GTP-binding protein Rit1 isoform 1 [Mus musculus].
Length = 219
Score = 105 bits (262), Expect = 7e-23
Identities = 56/167 (33%), Positives = 96/167 (57%), Gaps = 1/167 (0%)
Frame = +2
Query: 488 PQRRSRDFRVVVLGSAGVGKSALVQRWVRGNFREAYLPTIEDTYRQVLGCSHKVGALHIT 667
P SR++++V+LG+ GVGKSA+ +++ F E + PTIED Y+ + + L I
Sbjct: 15 PAALSREYKLVMLGAGGVGKSAMTMQFISHRFPEDHDPTIEDAYKIRIRIDDEPANLDIL 74
Query: 668 DTTGGRRYRGLQRLAIARGHAFILVYSVTKKHTLEELKPLYHLIRELKGNNPLKCPIILV 847
DT G + ++ + G FI+ YS+T + + E++ LI ++ + P++LV
Sbjct: 75 DTAGQAEFTAMRDQYMRAGEGFIICYSITDRRSFHEVREFKQLIYRVRRTD--DTPVVLV 132
Query: 848 GNKCD-ESHREVSEKEGAACASEWNCAFLETSAKMNINVQELFQMLL 985
GNK D + R+VS++EG + A E++C F ETSA + ++F L+
Sbjct: 133 GNKSDLKQLRQVSKEEGLSLAREFSCPFFETSAAYRYYIDDVFHALV 179
Database: RefSeq49_MP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 15,617,559
Number of sequences in database: 30,036
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 30036
Number of Hits to DB: 37,141,937
Number of extensions: 1027034
Number of successful extensions: 5463
Number of sequences better than 1.0e-05: 132
Number of HSP's gapped: 5207
Number of HSP's successfully gapped: 135
Length of query: 391
Length of database: 15,617,559
Length adjustment: 103
Effective length of query: 288
Effective length of database: 12,523,851
Effective search space: 3606869088
Effective search space used: 3606869088
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to RefSeqHP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-012728
(1173 letters)
Database: RefSeq49_HP.fasta
32,964 sequences; 18,297,164 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_004666.1| GTP-binding protein Di-Ras3 [Homo sapiens]. 273 3e-73
Alignment gi|NP_060064.2| GTP-binding protein Di-Ras2 [Homo sapiens]. 210 2e-54
Alignment gi|NP_660156.1| GTP-binding protein Di-Ras1 [Homo sapiens]. 209 3e-54
Alignment gi|NP_066361.1| ras-related protein Rap-2a precursor [Homo sapi... 137 1e-32
Alignment gi|NP_002877.2| ras-related protein Rap-2b precursor [Homo sapi... 134 2e-31
Alignment gi|NP_067006.3| ras-related protein Rap-2c precursor [Homo sapi... 133 4e-31
Alignment gi|NP_001010942.1| ras-related protein Rap-1b precursor [Homo s... 129 5e-30
Alignment gi|NP_056461.1| ras-related protein Rap-1b precursor [Homo sapi... 129 5e-30
Alignment gi|NP_001010935.1| ras-related protein Rap-1A precursor [Homo s... 128 9e-30
Alignment gi|NP_002875.1| ras-related protein Rap-1A precursor [Homo sapi... 128 9e-30
>ref|NP_004666.1| GTP-binding protein Di-Ras3 [Homo sapiens].
Length = 229
Score = 273 bits (697), Expect = 3e-73
Identities = 137/229 (59%), Positives = 168/229 (73%), Gaps = 1/229 (0%)
Frame = +2
Query: 401 MGNSCFGLKE-RLMKRLRPLPTVIVIRTCLPQRRSRDFRVVVLGSAGVGKSALVQRWVRG 577
MGN+ FG KE +L+KRLR LP ++++R P R+ RD+RVVV+G+AGVGKS L+ +W G
Sbjct: 1 MGNASFGSKEQKLLKRLRLLPALLILRAFKPHRKIRDYRVVVVGTAGVGKSTLLHKWASG 60
Query: 578 NFREAYLPTIEDTYRQVLGCSHKVGALHITDTTGGRRYRGLQRLAIARGHAFILVYSVTK 757
NFR YLPTIE+TY Q+LGCSH V +LHITD+ G R LQR IARGHAF+LVYSVTK
Sbjct: 61 NFRHEYLPTIENTYCQLLGCSHGVLSLHITDSKSGDGNRALQRHVIARGHAFVLVYSVTK 120
Query: 758 KHTLEELKPLYHLIRELKGNNPLKCPIILVGNKCDESHREVSEKEGAACASEWNCAFLET 937
K TLEELK Y LI ++KGNN K PI+LVGNK D++HREV+ +GA CA EWNCAF+E
Sbjct: 121 KETLEELKAFYELICKIKGNNLHKFPIVLVGNKSDDTHREVALNDGATCAMEWNCAFMEI 180
Query: 938 SAKMNINVQELFQMLLNHEXXXXXXXXXXXXXXXIPKTAEKLLGKCIIM 1084
SAK ++NVQELF MLLN++ +P T EKLL KCIIM
Sbjct: 181 SAKTDVNVQELFHMLLNYKKKPTTGLQEPEKKSQMPNTTEKLLDKCIIM 229
>ref|NP_060064.2| GTP-binding protein Di-Ras2 [Homo sapiens].
Length = 199
Score = 210 bits (535), Expect = 2e-54
Identities = 108/197 (54%), Positives = 136/197 (69%), Gaps = 1/197 (0%)
Frame = +2
Query: 497 RSRDFRVVVLGSAGVGKSALVQRWVRGNFREAYLPTIEDTYRQVLGCSHKVGALHITDTT 676
+S D+RV V G+ GVGKS+LV R+V+G FRE+Y+PT+EDTYRQV+ C + L ITDTT
Sbjct: 4 QSNDYRVAVFGAGGVGKSSLVLRFVKGTFRESYIPTVEDTYRQVISCDKSICTLQITDTT 63
Query: 677 GGRRYRGLQRLAIARGHAFILVYSVTKKHTLEELKPLYHLIRELKGNNPLKCPIILVGNK 856
G ++ +QRL+I++GHAFILVYS+T + +LEELKP+Y I E+KG+ PI+LVGNK
Sbjct: 64 GSHQFPAMQRLSISKGHAFILVYSITSRQSLEELKPIYEQICEIKGDVE-SIPIMLVGNK 122
Query: 857 CDES-HREVSEKEGAACASEWNCAFLETSAKMNINVQELFQMLLNHEXXXXXXXXXXXXX 1033
CDES REV E A A W CAF+ETSAK+N NV+ELFQ LLN E
Sbjct: 123 CDESPSREVQSSEAEALARTWKCAFMETSAKLNHNVKELFQELLNLEKRRTVSLQIDGKK 182
Query: 1034 XXIPKTAEKLLGKCIIM 1084
K EKL GKC+IM
Sbjct: 183 SKQQKRKEKLKGKCVIM 199
>ref|NP_660156.1| GTP-binding protein Di-Ras1 [Homo sapiens].
Length = 198
Score = 209 bits (533), Expect = 3e-54
Identities = 105/196 (53%), Positives = 136/196 (69%)
Frame = +2
Query: 497 RSRDFRVVVLGSAGVGKSALVQRWVRGNFREAYLPTIEDTYRQVLGCSHKVGALHITDTT 676
+S D+RVVV G+ GVGKS+LV R+V+G FR+ Y+PTIEDTYRQV+ C V L ITDTT
Sbjct: 4 QSNDYRVVVFGAGGVGKSSLVLRFVKGTFRDTYIPTIEDTYRQVISCDKSVCTLQITDTT 63
Query: 677 GGRRYRGLQRLAIARGHAFILVYSVTKKHTLEELKPLYHLIRELKGNNPLKCPIILVGNK 856
G ++ +QRL+I++GHAFILV+SVT K +LEEL P+Y LI ++KG+ P++LVGNK
Sbjct: 64 GSHQFPAMQRLSISKGHAFILVFSVTSKQSLEELGPIYKLIVQIKGSVE-DIPVMLVGNK 122
Query: 857 CDESHREVSEKEGAACASEWNCAFLETSAKMNINVQELFQMLLNHEXXXXXXXXXXXXXX 1036
CDE+ REV +E A A EW CAF+ETSAKMN NV+ELFQ LL E
Sbjct: 123 CDETQREVDTREAQAVAQEWKCAFMETSAKMNYNVKELFQELLTLETRRNMSLNIDGKRS 182
Query: 1037 XIPKTAEKLLGKCIIM 1084
K +++ GKC +M
Sbjct: 183 GKQKRTDRVKGKCTLM 198
>ref|NP_066361.1| ras-related protein Rap-2a precursor [Homo sapiens].
Length = 183
Score = 137 bits (346), Expect = 1e-32
Identities = 76/158 (48%), Positives = 97/158 (61%), Gaps = 1/158 (0%)
Frame = +2
Query: 503 RDFRVVVLGSAGVGKSALVQRWVRGNFREAYLPTIEDTYRQVLGCSHKVGALHITDTTGG 682
R+++VVVLGS GVGKSAL ++V G F E Y PTIED YR+ + L I DT G
Sbjct: 2 REYKVVVLGSGGVGKSALTVQFVTGTFIEKYDPTIEDFYRKEIEVDSSPSVLEILDTAGT 61
Query: 683 RRYRGLQRLAIARGHAFILVYSVTKKHTLEELKPLYHLIRELKGNNPLKCPIILVGNKCD 862
++ ++ L I G FILVYS+ + + +++KP+ I +K K P+ILVGNK D
Sbjct: 62 EQFASMRDLYIKNGQGFILVYSLVNQQSFQDIKPMRDQIIRVKRYE--KVPVILVGNKVD 119
Query: 863 -ESHREVSEKEGAACASEWNCAFLETSAKMNINVQELF 973
ES REVS EG A A EW C F+ETSAK V ELF
Sbjct: 120 LESEREVSSSEGRALAEEWGCPFMETSAKSKTMVDELF 157
>ref|NP_002877.2| ras-related protein Rap-2b precursor [Homo sapiens].
Length = 183
Score = 134 bits (337), Expect = 2e-31
Identities = 74/158 (46%), Positives = 99/158 (62%), Gaps = 1/158 (0%)
Frame = +2
Query: 503 RDFRVVVLGSAGVGKSALVQRWVRGNFREAYLPTIEDTYRQVLGCSHKVGALHITDTTGG 682
R+++VVVLGS GVGKSAL ++V G+F E Y PTIED YR+ + L I DT G
Sbjct: 2 REYKVVVLGSGGVGKSALTVQFVTGSFIEKYDPTIEDFYRKEIEVDSSPSVLEILDTAGT 61
Query: 683 RRYRGLQRLAIARGHAFILVYSVTKKHTLEELKPLYHLIRELKGNNPLKCPIILVGNKCD 862
++ ++ L I G FILVYS+ + + +++KP+ I +K + P+ILVGNK D
Sbjct: 62 EQFASMRDLYIKNGQGFILVYSLVNQQSFQDIKPMRDQIIRVKRYE--RVPMILVGNKVD 119
Query: 863 -ESHREVSEKEGAACASEWNCAFLETSAKMNINVQELF 973
E REVS EG A A EW+C F+ETSAK +V ELF
Sbjct: 120 LEGEREVSYGEGKALAEEWSCPFMETSAKNKASVDELF 157
>ref|NP_067006.3| ras-related protein Rap-2c precursor [Homo sapiens].
Length = 183
Score = 133 bits (334), Expect = 4e-31
Identities = 74/158 (46%), Positives = 95/158 (60%), Gaps = 1/158 (0%)
Frame = +2
Query: 503 RDFRVVVLGSAGVGKSALVQRWVRGNFREAYLPTIEDTYRQVLGCSHKVGALHITDTTGG 682
R+++VVVLGS GVGKSAL ++V G F E Y PTIED YR+ + L I DT G
Sbjct: 2 REYKVVVLGSGGVGKSALTVQFVTGTFIEKYDPTIEDFYRKEIEVDSSPSVLEILDTAGT 61
Query: 683 RRYRGLQRLAIARGHAFILVYSVTKKHTLEELKPLYHLIRELKGNNPLKCPIILVGNKCD 862
++ ++ L I G FILVYS+ + + +++KP+ I +K K P+ILVGNK D
Sbjct: 62 EQFASMRDLYIKNGQGFILVYSLVNQQSFQDIKPMRDQIVRVKRYE--KVPLILVGNKVD 119
Query: 863 -ESHREVSEKEGAACASEWNCAFLETSAKMNINVQELF 973
E REV EG A A EW C F+ETSAK V ELF
Sbjct: 120 LEPEREVMSSEGRALAQEWGCPFMETSAKSKSMVDELF 157
>ref|NP_001010942.1| ras-related protein Rap-1b precursor [Homo sapiens].
Length = 184
Score = 129 bits (324), Expect = 5e-30
Identities = 73/163 (44%), Positives = 104/163 (63%), Gaps = 2/163 (1%)
Frame = +2
Query: 503 RDFRVVVLGSAGVGKSALVQRWVRGNFREAYLPTIEDTYRQVLGCSHKVGALHITDTTGG 682
R++++VVLGS GVGKSAL ++V+G F E Y PTIED+YR+ + + L I DT G
Sbjct: 2 REYKLVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDAQQCMLEILDTAGT 61
Query: 683 RRYRGLQRLAIARGHAFILVYSVTKKHTLEELKPLYHLIRELKGNNPLKCPIILVGNKCD 862
++ ++ L + G F LVYS+T + T +L+ L I +K + + P+ILVGNKCD
Sbjct: 62 EQFTAMRDLYMKNGQGFALVYSITAQSTFNDLQDLREQILRVKDTDDV--PMILVGNKCD 119
Query: 863 -ESHREVSEKEGAACASEW-NCAFLETSAKMNINVQELFQMLL 985
E R V +++G A +W NCAFLE+SAK INV E+F L+
Sbjct: 120 LEDERVVGKEQGQNLARQWNNCAFLESSAKSKINVNEIFYDLV 162
>ref|NP_056461.1| ras-related protein Rap-1b precursor [Homo sapiens].
Length = 184
Score = 129 bits (324), Expect = 5e-30
Identities = 73/163 (44%), Positives = 104/163 (63%), Gaps = 2/163 (1%)
Frame = +2
Query: 503 RDFRVVVLGSAGVGKSALVQRWVRGNFREAYLPTIEDTYRQVLGCSHKVGALHITDTTGG 682
R++++VVLGS GVGKSAL ++V+G F E Y PTIED+YR+ + + L I DT G
Sbjct: 2 REYKLVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDAQQCMLEILDTAGT 61
Query: 683 RRYRGLQRLAIARGHAFILVYSVTKKHTLEELKPLYHLIRELKGNNPLKCPIILVGNKCD 862
++ ++ L + G F LVYS+T + T +L+ L I +K + + P+ILVGNKCD
Sbjct: 62 EQFTAMRDLYMKNGQGFALVYSITAQSTFNDLQDLREQILRVKDTDDV--PMILVGNKCD 119
Query: 863 -ESHREVSEKEGAACASEW-NCAFLETSAKMNINVQELFQMLL 985
E R V +++G A +W NCAFLE+SAK INV E+F L+
Sbjct: 120 LEDERVVGKEQGQNLARQWNNCAFLESSAKSKINVNEIFYDLV 162
>ref|NP_001010935.1| ras-related protein Rap-1A precursor [Homo sapiens].
Length = 184
Score = 128 bits (322), Expect = 9e-30
Identities = 73/163 (44%), Positives = 103/163 (63%), Gaps = 2/163 (1%)
Frame = +2
Query: 503 RDFRVVVLGSAGVGKSALVQRWVRGNFREAYLPTIEDTYRQVLGCSHKVGALHITDTTGG 682
R++++VVLGS GVGKSAL ++V+G F E Y PTIED+YR+ + + L I DT G
Sbjct: 2 REYKLVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDCQQCMLEILDTAGT 61
Query: 683 RRYRGLQRLAIARGHAFILVYSVTKKHTLEELKPLYHLIRELKGNNPLKCPIILVGNKCD 862
++ ++ L + G F LVYS+T + T +L+ L I +K + P+ILVGNKCD
Sbjct: 62 EQFTAMRDLYMKNGQGFALVYSITAQSTFNDLQDLREQILRVKDTEDV--PMILVGNKCD 119
Query: 863 -ESHREVSEKEGAACASEW-NCAFLETSAKMNINVQELFQMLL 985
E R V +++G A +W NCAFLE+SAK INV E+F L+
Sbjct: 120 LEDERVVGKEQGQNLARQWCNCAFLESSAKSKINVNEIFYDLV 162
>ref|NP_002875.1| ras-related protein Rap-1A precursor [Homo sapiens].
Length = 184
Score = 128 bits (322), Expect = 9e-30
Identities = 73/163 (44%), Positives = 103/163 (63%), Gaps = 2/163 (1%)
Frame = +2
Query: 503 RDFRVVVLGSAGVGKSALVQRWVRGNFREAYLPTIEDTYRQVLGCSHKVGALHITDTTGG 682
R++++VVLGS GVGKSAL ++V+G F E Y PTIED+YR+ + + L I DT G
Sbjct: 2 REYKLVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDCQQCMLEILDTAGT 61
Query: 683 RRYRGLQRLAIARGHAFILVYSVTKKHTLEELKPLYHLIRELKGNNPLKCPIILVGNKCD 862
++ ++ L + G F LVYS+T + T +L+ L I +K + P+ILVGNKCD
Sbjct: 62 EQFTAMRDLYMKNGQGFALVYSITAQSTFNDLQDLREQILRVKDTEDV--PMILVGNKCD 119
Query: 863 -ESHREVSEKEGAACASEW-NCAFLETSAKMNINVQELFQMLL 985
E R V +++G A +W NCAFLE+SAK INV E+F L+
Sbjct: 120 LEDERVVGKEQGQNLARQWCNCAFLESSAKSKINVNEIFYDLV 162
Database: RefSeq49_HP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,297,164
Number of sequences in database: 32,964
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 32964
Number of Hits to DB: 44,124,851
Number of extensions: 1241389
Number of successful extensions: 6619
Number of sequences better than 1.0e-05: 167
Number of HSP's gapped: 6363
Number of HSP's successfully gapped: 168
Length of query: 391
Length of database: 18,297,164
Length adjustment: 105
Effective length of query: 286
Effective length of database: 14,835,944
Effective search space: 4243079984
Effective search space used: 4243079984
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to Sscrofa10_2
BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-012728
(1173 letters)
Database: Sscrofa_10.2.fasta
4582 sequences; 2,808,509,378 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Sscrofa_Chr06 1622 0.0
Sscrofa_ChrX 92 8e-16
>Sscrofa_Chr06
|| Length = 157765593
Score = 1622 bits (818), Expect = 0.0
Identities = 838/842 (99%), Gaps = 2/842 (0%)
Strand = Plus / Plus
Query: 334 aggctctcctcgttgctggccaagtgccagagaacctgtgcacctgtctccccatcaata 393
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 133866072 aggctctcctcgttgctggccaagtgccagagaacctgtgcacctgtctccccatcaata 133866131
Query: 394 cccaacgatgggcaactcctgcttcggcctcaaggaacgcctgatgaagcggcttcggcc 453
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 133866132 cccaacgatgggcaactcctgcttcggcctcaaggaacgcctgatgaagcggcttcggcc 133866191
Query: 454 tctgcctacggtgatcgtcatccgtacctgcctgccccagcgaaggagccgagatttccg 513
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 133866192 tctgcctacggtgatcgtcatccgtacctgcctgccccagcgaaggagccgagatttccg 133866251
Query: 514 cgtggtggtcctgggctcggccggcgtgggcaagagcgcgctggtgcagaggtgggtgcg 573
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 133866252 cgtggtggtcctgggctcggccggcgtgggcaagagcgcgctggtgcagaggtgggtgcg 133866311
Query: 574 cggcaacttccgtgaggcgtatctgccgactatcgaagatacctaccgccaggtgctggg 633
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 133866312 cggcaacttccgtgaggcgtatctgccgactatcgaagatacctaccgccaggtgctggg 133866371
Query: 634 ctgcagccacaaggtgggcgcgctgcacatcaccgacaccaccggtggccgccgctaccg 693
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 133866372 ctgcagccacaaggtgggcgcgctgcacatcaccgacaccaccggtggccgccgctaccg 133866431
Query: 694 gggcctgcagcgccttgccattgccaggggtcacgccttcatcctggtctactccgtcac 753
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 133866432 gggcctgcagcgccttgccattgccaggggtcacgccttcatcctggtctactccgtcac 133866491
Query: 754 caagaagcacaccctggaggagctgaagcccctgtaccatctgatccgcgagctcaaagg 813
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 133866492 caagaagcacaccctggaggagctgaagcccctgtaccatctgatccgcgagctcaaagg 133866551
Query: 814 taacaacccgctgaagtgcccgatcatcctggtgggcaacaagtgcgacgagagccaccg 873
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 133866552 taacaacccgctgaagtgcccgatcatcctggtgggcaacaagtgcgacgagagccaccg 133866611
Query: 874 ggaggtgagtgagaaggaaggggctgcctgcgcgtccgagtggaattgcgccttcttgga 933
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 133866612 ggaggtgagtgagaaggaaggggctgcctgcgcgtccgagtggaattgcgccttcttgga 133866671
Query: 934 gacctctgccaagatgaatatcaacgtgcaggagctgttccagatgctgctgaaccacga 993
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 133866672 gacctctgccaagatgaatatcaacgtgcaggagctgttccagatgctgctgaaccacga 133866731
Query: 994 gaagaaacccgccgccagcgcccagcccgcgcagaagaaatcccagatccccaagaccgc 1053
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 133866732 gaagaaacccgccgccagcgcccagcccgcgcagaagaaatcccagatccccaagaccgc 133866791
Query: 1054 cgagaagctgctgggcaagtgcatcatcatgtgagccctgggtcttaggagcgcgacctt 1113
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 133866792 cgagaagctgctgggcaagtgcatcatcatgtgagccctgggtcttaggagcgcgacctt 133866851
Query: 1114 ctccttc-gtgtg-cgaaatcatggaccgacccccatgtgatgtgtcacctgtacatgac 1171
||||||| ||||| |||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 133866852 ctccttcagtgtgccgaaatcatggaccgaccccattgtgatgtgtcacctgtacatgac 133866911
Query: 1172 tg 1173
||
Sbjct: 133866912 tg 133866913
Score = 656 bits (331), Expect = 0.0
Identities = 334/335 (99%)
Strand = Plus / Plus
Query: 2 gcctcccaccctcgcccccgcccgggatgtaggtacccgtgtgggggacgccaaagtgga 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 133864988 gcctcccaccctcgcccccgcccgggatgtaggtacccgtgtgggggacgccaaagtgga 133865047
Query: 62 ccgcagaggggcgcgtctgggctcggccagccccgcacagcccgatcccccctctgcgaa 121
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 133865048 ccgcagaggggcgcctctgggctcggccagccccgcacagcccgatcccccctctgcgaa 133865107
Query: 122 ccttgcaagtggagtctcccagtctgcgccccctggctctggcaaaccagtctcagtccc 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 133865108 ccttgcaagtggagtctcccagtctgcgccccctggctctggcaaaccagtctcagtccc 133865167
Query: 182 actgtttgagcatttcgcccccagcctccgagcgcgctggttgccagctgccgctcggag 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 133865168 actgtttgagcatttcgcccccagcctccgagcgcgctggttgccagctgccgctcggag 133865227
Query: 242 tttggttacgcaatttgttgccgcagctgctgccgcggccgaagccacctcagtgaggag 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 133865228 tttggttacgcaatttgttgccgcagctgctgccgcggccgaagccacctcagtgaggag 133865287
Query: 302 cgaatttgccgcgaggttcccatctcggaaagagg 336
|||||||||||||||||||||||||||||||||||
Sbjct: 133865288 cgaatttgccgcgaggttcccatctcggaaagagg 133865322
>Sscrofa_ChrX
|| Length = 144288218
Score = 91.7 bits (46), Expect = 8e-16
Identities = 79/90 (87%)
Strand = Plus / Minus
Query: 1026 agaagaaatcccagatccccaagaccgccgagaagctgctgggcaagtgcatcatcatgt 1085
||||||||||||||||| |||||| ||| |||||||| |||| ||||||||||||||||
Sbjct: 80746598 agaagaaatcccagatcttcaagactgccaagaagctgttgggaaagtgcatcatcatgt 80746539
Query: 1086 gagccctgggtcttaggagcgcgaccttct 1115
|| || ||||||| |||||| | |||||||
Sbjct: 80746538 gaaccttgggtctcaggagcccaaccttct 80746509
Score = 87.7 bits (44), Expect = 1e-14
Identities = 152/188 (80%)
Strand = Plus / Minus
Query: 593 tatctgccgactatcgaagatacctaccgccaggtgctgggctgcagccacaaggtgggc 652
||||||| ||||||| ||||||||||| |||||||| || || ||||||||||||||||
Sbjct: 80747004 tatctgctgactatccaagatacctactgccaggtgtaggcctacagccacaaggtgggc 80746945
Query: 653 gcgctgcacatcaccgacaccaccggtggccgccgctaccggggcctgcagcgccttgcc 712
||||||||| ||| |||| || || || | ||||| || |||||||| ||| |
Sbjct: 80746944 atgctgcacattaccaacactactggcagcagttgctactggaccctgcagcacctcact 80746885
Query: 713 attgccaggggtcacgccttcatcctggtctactccgtcaccaagaagcacaccctggag 772
||||||| |||||| | ||||||| |||||||| ||||| |||||||| | ||||||
Sbjct: 80746884 gttgccagaggtcacactttcatccatgtctactctgtcactaagaagcaaatactggag 80746825
Query: 773 gagctgaa 780
||||||||
Sbjct: 80746824 gagctgaa 80746817
Database: Sscrofa_10.2.fasta
Posted date: Nov 16, 2011 10:34 AM
Number of letters in database: 2,808,509,378
Number of sequences in database: 4582
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4582
Number of Hits to DB: 24,908,792
Number of extensions: 153
Number of successful extensions: 153
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 152
Number of HSP's successfully gapped: 4
Length of query: 1173
Length of database: 2,808,509,378
Length adjustment: 21
Effective length of query: 1152
Effective length of database: 2,808,413,156
Effective search space: 3235291955712
Effective search space used: 3235291955712
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 18 (36.2 bits)
S2: 30 (60.0 bits)