Search to RefSeqCP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-012803
(1096 letters)
Database: RefSeq49_CP.fasta
33,336 sequences; 18,874,504 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_532844.2| PREDICTED: similar to solute carrier family 25,... 535 e-152
Alignment gi|XP_537947.2| PREDICTED: similar to ADP/ATP translocase 3 (Ad... 534 e-152
Alignment gi|XP_549215.2| PREDICTED: similar to solute carrier family 25,... 521 e-148
Alignment gi|XP_851701.1| PREDICTED: similar to solute carrier family 25,... 521 e-148
Alignment gi|XP_864148.1| PREDICTED: similar to solute carrier family 25,... 509 e-144
Alignment gi|XP_864192.1| PREDICTED: similar to solute carrier family 25,... 502 e-142
Alignment gi|XP_864170.1| PREDICTED: similar to solute carrier family 25,... 490 e-139
Alignment gi|XP_864217.1| PREDICTED: similar to solute carrier family 25,... 446 e-125
Alignment gi|XP_864129.1| PREDICTED: similar to ADP/ATP translocase 2 (Ad... 413 e-115
Alignment gi|XP_540952.2| PREDICTED: similar to solute carrier family 25 ... 411 e-115
>ref|XP_532844.2| PREDICTED: similar to solute carrier family 25, member 4 [Canis
familiaris].
Length = 298
Score = 535 bits (1377), Expect = e-152
Identities = 268/298 (89%), Positives = 274/298 (91%)
Frame = +2
Query: 137 MSDQAWSFLKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQISAEKQYKGIIDCVVR 316
MSD A SFLKDFLAGGVAAA+SKTAVA I QVQHASKQISAEKQYKGIIDCVVR
Sbjct: 1 MSDHALSFLKDFLAGGVAAAVSKTAVATIPPPLQPPQVQHASKQISAEKQYKGIIDCVVR 60
Query: 317 IPKEQGFLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDRHKQFWRYFXXXXXXX 496
IPKEQGFLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDRHKQFWRYF
Sbjct: 61 IPKEQGFLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDRHKQFWRYFAGNLASG 120
Query: 497 XXXXXTSLCFVYPLDFARTRLAADVGKGAAQREFTGLGNCLAKIFKSDGLRGLYQGFNVS 676
TSLCFVYPLDFARTRLAADVGKGAAQREF+GLG+CL KIFKSDGLRGLYQGF+VS
Sbjct: 121 GAAGATSLCFVYPLDFARTRLAADVGKGAAQREFSGLGDCLTKIFKSDGLRGLYQGFSVS 180
Query: 677 VQGIIIYRAAYFGVYDTAKGMLPDPKNVHIIVSWMIAQTVTAVAGLVSYPFDTVRRRMMM 856
VQGIIIYRAAYFGVYDTAKGMLPDPKNVHIIVSWMIAQ+VTAVAGLVSYPFDTVRRRMMM
Sbjct: 181 VQGIIIYRAAYFGVYDTAKGMLPDPKNVHIIVSWMIAQSVTAVAGLVSYPFDTVRRRMMM 240
Query: 857 QSGRKGADIMYTGTVDCWRKIAKDEGPKAFFKGAWSNVLRGMGGAFVLVLYDEIKKYV 1030
QSGRKGADIMYTGTVDCWRKIAKDEG KAFFKGAWSNVLRGMGGAFVLVLYDEIKK+V
Sbjct: 241 QSGRKGADIMYTGTVDCWRKIAKDEGAKAFFKGAWSNVLRGMGGAFVLVLYDEIKKFV 298
>ref|XP_537947.2| PREDICTED: similar to ADP/ATP translocase 3 (Adenine nucleotide
translocator 2) (ANT 3) (ADP,ATP carrier protein 3)
(Solute carrier family 25, member 6) (ADP,ATP carrier
protein, isoform T2) [Canis familiaris].
Length = 470
Score = 534 bits (1375), Expect = e-152
Identities = 264/324 (81%), Positives = 281/324 (86%)
Frame = +2
Query: 59 SRGGRVRPGRESESAAPGGGVRPAVTMSDQAWSFLKDFLAGGVAAAISKTAVAPIERVKL 238
S G VRP + + P RP M++QA SF KDFLAGG+AAAISKTAVAPIERVKL
Sbjct: 149 SLGSPVRPAVRART--PPSAARPPAAMTEQAISFAKDFLAGGIAAAISKTAVAPIERVKL 206
Query: 239 LLQVQHASKQISAEKQYKGIIDCVVRIPKEQGFLSFWRGNLANVIRYFPTQALNFAFKDK 418
LLQVQHASKQI+A+KQYKGI+DC+VRIPKEQG LSFWRGNLANVIRYFPTQALNFAFKDK
Sbjct: 207 LLQVQHASKQIAADKQYKGIVDCIVRIPKEQGVLSFWRGNLANVIRYFPTQALNFAFKDK 266
Query: 419 YKQIFLGGVDRHKQFWRYFXXXXXXXXXXXXTSLCFVYPLDFARTRLAADVGKGAAQREF 598
YKQIFLGGVD+H QFWRYF TSLCFVYPLDFARTRLAADVGK +REF
Sbjct: 267 YKQIFLGGVDKHTQFWRYFAGNLASGGAAGATSLCFVYPLDFARTRLAADVGKSGTEREF 326
Query: 599 TGLGNCLAKIFKSDGLRGLYQGFNVSVQGIIIYRAAYFGVYDTAKGMLPDPKNVHIIVSW 778
GLG+CL KI KSDG+RGLYQGFNVSVQGIIIYRAAYFGVYDTAKGMLPDPKN HI+VSW
Sbjct: 327 KGLGDCLVKITKSDGIRGLYQGFNVSVQGIIIYRAAYFGVYDTAKGMLPDPKNTHIVVSW 386
Query: 779 MIAQTVTAVAGLVSYPFDTVRRRMMMQSGRKGADIMYTGTVDCWRKIAKDEGPKAFFKGA 958
MIAQTVTAVAG+VSYPFDTVRRRMMMQSGRKGADIMY GTVDCWRKI KDEG KAFFKGA
Sbjct: 387 MIAQTVTAVAGVVSYPFDTVRRRMMMQSGRKGADIMYKGTVDCWRKIFKDEGGKAFFKGA 446
Query: 959 WSNVLRGMGGAFVLVLYDEIKKYV 1030
WSNVLRGMGGAFVLVLYDE+KK +
Sbjct: 447 WSNVLRGMGGAFVLVLYDELKKVI 470
>ref|XP_549215.2| PREDICTED: similar to solute carrier family 25, member 5 isoform 1
[Canis familiaris].
Length = 298
Score = 521 bits (1341), Expect = e-148
Identities = 254/297 (85%), Positives = 269/297 (90%)
Frame = +2
Query: 137 MSDQAWSFLKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQISAEKQYKGIIDCVVR 316
M+D SF KDFLAGGV+AAISKTAVAPIERVKLLLQVQHASKQI+A+KQYKGIIDCVVR
Sbjct: 1 MTDATVSFTKDFLAGGVSAAISKTAVAPIERVKLLLQVQHASKQITADKQYKGIIDCVVR 60
Query: 317 IPKEQGFLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDRHKQFWRYFXXXXXXX 496
IPKEQG LSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVD+ QFWRYF
Sbjct: 61 IPKEQGVLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDKRTQFWRYFAGNLASG 120
Query: 497 XXXXXTSLCFVYPLDFARTRLAADVGKGAAQREFTGLGNCLAKIFKSDGLRGLYQGFNVS 676
TSLCFVYPLDFARTRLAADVGK A+REF GLG+CL KI+KSDG+RGLYQGFNVS
Sbjct: 121 GAAGATSLCFVYPLDFARTRLAADVGKAGAEREFRGLGDCLVKIYKSDGIRGLYQGFNVS 180
Query: 677 VQGIIIYRAAYFGVYDTAKGMLPDPKNVHIIVSWMIAQTVTAVAGLVSYPFDTVRRRMMM 856
VQGIIIYRAAYFG+YDTAKGMLPDPKN HI +SWMIAQ+VTAVAGL SYPFDTVRRRMMM
Sbjct: 181 VQGIIIYRAAYFGIYDTAKGMLPDPKNTHIFISWMIAQSVTAVAGLTSYPFDTVRRRMMM 240
Query: 857 QSGRKGADIMYTGTVDCWRKIAKDEGPKAFFKGAWSNVLRGMGGAFVLVLYDEIKKY 1027
QSGRKG DIMYTGT+DCWRKIA+DEG KAFFKGAWSNVLRGMGGAFVLVLYDEIKK+
Sbjct: 241 QSGRKGTDIMYTGTLDCWRKIARDEGGKAFFKGAWSNVLRGMGGAFVLVLYDEIKKF 297
>ref|XP_851701.1| PREDICTED: similar to solute carrier family 25, member 5 isoform 2
[Canis familiaris].
Length = 298
Score = 521 bits (1341), Expect = e-148
Identities = 254/297 (85%), Positives = 269/297 (90%)
Frame = +2
Query: 137 MSDQAWSFLKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQISAEKQYKGIIDCVVR 316
M+D SF KDFLAGGV+AAISKTAVAPIERVKLLLQVQHASKQI+A+KQYKGIIDCVVR
Sbjct: 1 MTDATVSFTKDFLAGGVSAAISKTAVAPIERVKLLLQVQHASKQITADKQYKGIIDCVVR 60
Query: 317 IPKEQGFLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDRHKQFWRYFXXXXXXX 496
IPKEQG LSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVD+ QFWRYF
Sbjct: 61 IPKEQGVLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDKRTQFWRYFAGNLASG 120
Query: 497 XXXXXTSLCFVYPLDFARTRLAADVGKGAAQREFTGLGNCLAKIFKSDGLRGLYQGFNVS 676
TSLCFVYPLDFARTRLAADVGK A+REF GLG+CL KI+KSDG+RGLYQGFNVS
Sbjct: 121 GAAGATSLCFVYPLDFARTRLAADVGKAGAEREFRGLGDCLVKIYKSDGIRGLYQGFNVS 180
Query: 677 VQGIIIYRAAYFGVYDTAKGMLPDPKNVHIIVSWMIAQTVTAVAGLVSYPFDTVRRRMMM 856
VQGIIIYRAAYFG+YDTAKGMLPDPKN HI +SWMIAQ+VTAVAGL SYPFDTVRRRMMM
Sbjct: 181 VQGIIIYRAAYFGIYDTAKGMLPDPKNTHIFISWMIAQSVTAVAGLTSYPFDTVRRRMMM 240
Query: 857 QSGRKGADIMYTGTVDCWRKIAKDEGPKAFFKGAWSNVLRGMGGAFVLVLYDEIKKY 1027
QSGRKG DIMYTGT+DCWRKIA+DEG KAFFKGAWSNVLRGMGGAFVLVLYDEIKK+
Sbjct: 241 QSGRKGTDIMYTGTLDCWRKIARDEGGKAFFKGAWSNVLRGMGGAFVLVLYDEIKKF 297
>ref|XP_864148.1| PREDICTED: similar to solute carrier family 25, member 5 isoform 4
[Canis familiaris].
Length = 298
Score = 509 bits (1310), Expect = e-144
Identities = 249/297 (83%), Positives = 265/297 (89%)
Frame = +2
Query: 137 MSDQAWSFLKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQISAEKQYKGIIDCVVR 316
M+D SF KDFLAGGV+AAISKTAVAPIERVKLLLQVQHASKQI+A+KQYKGIIDCVVR
Sbjct: 1 MTDATVSFTKDFLAGGVSAAISKTAVAPIERVKLLLQVQHASKQITADKQYKGIIDCVVR 60
Query: 317 IPKEQGFLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDRHKQFWRYFXXXXXXX 496
IPKEQG LSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVD+ QFWRYF
Sbjct: 61 IPKEQGVLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDKRTQFWRYFAGNLASG 120
Query: 497 XXXXXTSLCFVYPLDFARTRLAADVGKGAAQREFTGLGNCLAKIFKSDGLRGLYQGFNVS 676
TSLCFVYPLDFARTRLAADVGK A+REF GLG+CL KI+KSDG+RGLYQGFNVS
Sbjct: 121 GAAGATSLCFVYPLDFARTRLAADVGKAGAEREFRGLGDCLVKIYKSDGIRGLYQGFNVS 180
Query: 677 VQGIIIYRAAYFGVYDTAKGMLPDPKNVHIIVSWMIAQTVTAVAGLVSYPFDTVRRRMMM 856
VQGIIIYRAAYFG+YDTAKGMLPDPKN HI +SWMIAQ+VTAVAGL SYPFDTVRRRMMM
Sbjct: 181 VQGIIIYRAAYFGIYDTAKGMLPDPKNTHIFISWMIAQSVTAVAGLTSYPFDTVRRRMMM 240
Query: 857 QSGRKGADIMYTGTVDCWRKIAKDEGPKAFFKGAWSNVLRGMGGAFVLVLYDEIKKY 1027
Q + DIMYTGT+DCWRKIA+DEG KAFFKGAWSNVLRGMGGAFVLVLYDEIKK+
Sbjct: 241 QLWPQATDIMYTGTLDCWRKIARDEGGKAFFKGAWSNVLRGMGGAFVLVLYDEIKKF 297
>ref|XP_864192.1| PREDICTED: similar to solute carrier family 25, member 5 isoform 6
[Canis familiaris].
Length = 299
Score = 502 bits (1292), Expect = e-142
Identities = 249/298 (83%), Positives = 265/298 (88%), Gaps = 1/298 (0%)
Frame = +2
Query: 137 MSDQAWSFLKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQISAEKQYKGIIDCVVR 316
M+D SF KDFLAGGV+AAISKTAVAPIERVKLLLQVQHASKQI+A+KQYKGIIDCVVR
Sbjct: 1 MTDATVSFTKDFLAGGVSAAISKTAVAPIERVKLLLQVQHASKQITADKQYKGIIDCVVR 60
Query: 317 IPKEQGFLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDRHKQFWRYFXXXXXXX 496
IPKEQG LSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVD+ QFWRYF
Sbjct: 61 IPKEQGVLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDKRTQFWRYFAGNLASG 120
Query: 497 XXXXXTSLCFVYPLDFARTRLAADVGKGAAQREFTGLGNCLAKIFKSDGLRGLYQGFNVS 676
TSLCFVYPLDFARTRLAADVGK A+REF GLG+CL KI+KSDG+RGLYQGFNVS
Sbjct: 121 GAAGATSLCFVYPLDFARTRLAADVGKAGAEREFRGLGDCLVKIYKSDGIRGLYQGFNVS 180
Query: 677 VQGIIIYRAAYFGVYDTAKGMLPDP-KNVHIIVSWMIAQTVTAVAGLVSYPFDTVRRRMM 853
VQGIIIYRAAYFG+YDTAKG L +N HI +SWMIAQ+VTAVAGL SYPFDTVRRRMM
Sbjct: 181 VQGIIIYRAAYFGIYDTAKGKLAMCFENTHIFISWMIAQSVTAVAGLTSYPFDTVRRRMM 240
Query: 854 MQSGRKGADIMYTGTVDCWRKIAKDEGPKAFFKGAWSNVLRGMGGAFVLVLYDEIKKY 1027
MQSGRKG DIMYTGT+DCWRKIA+DEG KAFFKGAWSNVLRGMGGAFVLVLYDEIKK+
Sbjct: 241 MQSGRKGTDIMYTGTLDCWRKIARDEGGKAFFKGAWSNVLRGMGGAFVLVLYDEIKKF 298
>ref|XP_864170.1| PREDICTED: similar to solute carrier family 25, member 5 isoform 5
[Canis familiaris].
Length = 294
Score = 490 bits (1262), Expect = e-139
Identities = 245/297 (82%), Positives = 260/297 (87%)
Frame = +2
Query: 137 MSDQAWSFLKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQISAEKQYKGIIDCVVR 316
M+D SF KDFLAGGV+AAISKTAVAPIERVKLLLQVQHASKQI+A+KQYKGIIDCVVR
Sbjct: 1 MTDATVSFTKDFLAGGVSAAISKTAVAPIERVKLLLQVQHASKQITADKQYKGIIDCVVR 60
Query: 317 IPKEQGFLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDRHKQFWRYFXXXXXXX 496
IPKEQG LSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVD+ QFWRYF
Sbjct: 61 IPKEQGVLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDKRTQFWRYFAGNLASG 120
Query: 497 XXXXXTSLCFVYPLDFARTRLAADVGKGAAQREFTGLGNCLAKIFKSDGLRGLYQGFNVS 676
TSLCFVYPLDFARTRLAADVGK A+REF GLG+CL KI+KSDG+RGLYQGFNVS
Sbjct: 121 GAAGATSLCFVYPLDFARTRLAADVGKAGAEREFRGLGDCLVKIYKSDGIRGLYQGFNVS 180
Query: 677 VQGIIIYRAAYFGVYDTAKGMLPDPKNVHIIVSWMIAQTVTAVAGLVSYPFDTVRRRMMM 856
VQGIIIYRAAYFG+YDTAKG L + WMIAQ+VTAVAGL SYPFDTVRRRMMM
Sbjct: 181 VQGIIIYRAAYFGIYDTAKGKLA----MCFEAVWMIAQSVTAVAGLTSYPFDTVRRRMMM 236
Query: 857 QSGRKGADIMYTGTVDCWRKIAKDEGPKAFFKGAWSNVLRGMGGAFVLVLYDEIKKY 1027
QSGRKG DIMYTGT+DCWRKIA+DEG KAFFKGAWSNVLRGMGGAFVLVLYDEIKK+
Sbjct: 237 QSGRKGTDIMYTGTLDCWRKIARDEGGKAFFKGAWSNVLRGMGGAFVLVLYDEIKKF 293
>ref|XP_864217.1| PREDICTED: similar to solute carrier family 25, member 5 isoform 7
[Canis familiaris].
Length = 256
Score = 446 bits (1148), Expect = e-125
Identities = 227/297 (76%), Positives = 241/297 (81%)
Frame = +2
Query: 137 MSDQAWSFLKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQISAEKQYKGIIDCVVR 316
M+D SF KDFLAGGV+AAISKTAVAPIERVKLLLQVQHASKQI+A+KQYKGIIDCVVR
Sbjct: 1 MTDATVSFTKDFLAGGVSAAISKTAVAPIERVKLLLQVQHASKQITADKQYKGIIDCVVR 60
Query: 317 IPKEQGFLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDRHKQFWRYFXXXXXXX 496
IPKEQG LSFWRGNLANVIRYFPTQALNFAFKDKYKQIFL
Sbjct: 61 IPKEQGVLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFL-------------------- 100
Query: 497 XXXXXTSLCFVYPLDFARTRLAADVGKGAAQREFTGLGNCLAKIFKSDGLRGLYQGFNVS 676
ADVGK A+REF GLG+CL KI+KSDG+RGLYQGFNVS
Sbjct: 101 ----------------------ADVGKAGAEREFRGLGDCLVKIYKSDGIRGLYQGFNVS 138
Query: 677 VQGIIIYRAAYFGVYDTAKGMLPDPKNVHIIVSWMIAQTVTAVAGLVSYPFDTVRRRMMM 856
VQGIIIYRAAYFG+YDTAKGMLPDPKN HI +SWMIAQ+VTAVAGL SYPFDTVRRRMMM
Sbjct: 139 VQGIIIYRAAYFGIYDTAKGMLPDPKNTHIFISWMIAQSVTAVAGLTSYPFDTVRRRMMM 198
Query: 857 QSGRKGADIMYTGTVDCWRKIAKDEGPKAFFKGAWSNVLRGMGGAFVLVLYDEIKKY 1027
QSGRKG DIMYTGT+DCWRKIA+DEG KAFFKGAWSNVLRGMGGAFVLVLYDEIKK+
Sbjct: 199 QSGRKGTDIMYTGTLDCWRKIARDEGGKAFFKGAWSNVLRGMGGAFVLVLYDEIKKF 255
>ref|XP_864129.1| PREDICTED: similar to ADP/ATP translocase 2 (Adenine nucleotide
translocator 2) (ANT 2) (ADP,ATP carrier protein 2)
(Solute carrier family 25, member 5) (ADP,ATP carrier
protein, fibroblast isoform) isoform 3 [Canis
familiaris].
Length = 251
Score = 413 bits (1061), Expect = e-115
Identities = 213/297 (71%), Positives = 226/297 (76%)
Frame = +2
Query: 137 MSDQAWSFLKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQISAEKQYKGIIDCVVR 316
M+D SF KDFLAGGV+AAISKTAVAPIERVKLLLQVQHASKQI+A+KQYKGIIDCVVR
Sbjct: 1 MTDATVSFTKDFLAGGVSAAISKTAVAPIERVKLLLQVQHASKQITADKQYKGIIDCVVR 60
Query: 317 IPKEQGFLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDRHKQFWRYFXXXXXXX 496
IPKEQG LSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVD+ QFWRYF
Sbjct: 61 IPKEQGVLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDKRTQFWRYFAGNLASG 120
Query: 497 XXXXXTSLCFVYPLDFARTRLAADVGKGAAQREFTGLGNCLAKIFKSDGLRGLYQGFNVS 676
TSLCFVYPLDFARTRLAADVGK A+REF GLG+CL KI+KSDG+RGLYQGFNVS
Sbjct: 121 GAAGATSLCFVYPLDFARTRLAADVGKAGAEREFRGLGDCLVKIYKSDGIRGLYQGFNVS 180
Query: 677 VQGIIIYRAAYFGVYDTAKGMLPDPKNVHIIVSWMIAQTVTAVAGLVSYPFDTVRRRMMM 856
VQGIIIYRAAYFG+YDTAK
Sbjct: 181 VQGIIIYRAAYFGIYDTAK----------------------------------------- 199
Query: 857 QSGRKGADIMYTGTVDCWRKIAKDEGPKAFFKGAWSNVLRGMGGAFVLVLYDEIKKY 1027
ADIMYTGT+DCWRKIA+DEG KAFFKGAWSNVLRGMGGAFVLVLYDEIKK+
Sbjct: 200 ------ADIMYTGTLDCWRKIARDEGGKAFFKGAWSNVLRGMGGAFVLVLYDEIKKF 250
>ref|XP_540952.2| PREDICTED: similar to solute carrier family 25 (mitochondrial
carrier; adenine nucleotide translocator), member 31
[Canis familiaris].
Length = 459
Score = 411 bits (1057), Expect = e-115
Identities = 200/292 (68%), Positives = 238/292 (81%)
Frame = +2
Query: 155 SFLKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQISAEKQYKGIIDCVVRIPKEQG 334
SF KD LAGGVAAA+SKTAVAPIERVKLLLQVQ +SKQISAE QYKG++DC+VRIP+EQG
Sbjct: 159 SFGKDLLAGGVAAAVSKTAVAPIERVKLLLQVQASSKQISAETQYKGMMDCLVRIPREQG 218
Query: 335 FLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDRHKQFWRYFXXXXXXXXXXXXT 514
F S+WRGNLANVIRYFPTQALNFAFKDKYKQ+F+ GV++ KQFWR+F T
Sbjct: 219 FFSYWRGNLANVIRYFPTQALNFAFKDKYKQLFMSGVNKEKQFWRWFLANLASGGAAGAT 278
Query: 515 SLCFVYPLDFARTRLAADVGKGAAQREFTGLGNCLAKIFKSDGLRGLYQGFNVSVQGIII 694
SLC VYPLDFARTRL D+GKG +R+F GLG+C+ KI KSDG+ GLYQGF VSVQGI++
Sbjct: 279 SLCVVYPLDFARTRLGVDIGKGPEERQFKGLGDCIIKIAKSDGIVGLYQGFGVSVQGIVV 338
Query: 695 YRAAYFGVYDTAKGMLPDPKNVHIIVSWMIAQTVTAVAGLVSYPFDTVRRRMMMQSGRKG 874
YRA+YFG YDT KG+LP PK +VS+ IAQ VT +G++SYPFDTVRRRMMMQSG
Sbjct: 339 YRASYFGAYDTVKGLLPKPKETPFLVSFFIAQVVTTCSGILSYPFDTVRRRMMMQSGE-- 396
Query: 875 ADIMYTGTVDCWRKIAKDEGPKAFFKGAWSNVLRGMGGAFVLVLYDEIKKYV 1030
+ Y GT+DC+ KI + EG AFF+GA+SN+LRG GGA VLVLYD+IK+++
Sbjct: 397 VERQYKGTLDCFVKIYQHEGVNAFFRGAFSNILRGTGGALVLVLYDKIKEFL 448
Database: RefSeq49_CP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,874,504
Number of sequences in database: 33,336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33336
Number of Hits to DB: 47,640,449
Number of extensions: 1391195
Number of successful extensions: 5675
Number of sequences better than 1.0e-05: 67
Number of HSP's gapped: 5441
Number of HSP's successfully gapped: 89
Length of query: 365
Length of database: 18,874,504
Length adjustment: 104
Effective length of query: 261
Effective length of database: 15,407,560
Effective search space: 4021373160
Effective search space used: 4021373160
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Animal-Genome cDNA 20110601C-012803
Search to RefSeqBP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-012803
(1096 letters)
Database: RefSeq49_BP.fasta
33,088 sequences; 17,681,374 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_777083.1| ADP/ATP translocase 1 [Bos taurus]. 567 e-162
Alignment gi|NP_777084.1| ADP/ATP translocase 2 [Bos taurus]. 524 e-149
Alignment gi|NP_777085.1| ADP/ATP translocase 3 [Bos taurus]. 522 e-148
Alignment gi|XP_002689470.1| PREDICTED: ADP/ATP translocase 1-like [Bos t... 455 e-128
Alignment gi|XP_001254615.1| PREDICTED: ADP/ATP translocase 1-like [Bos t... 455 e-128
Alignment gi|NP_001039965.1| ADP/ATP translocase 4 [Bos taurus]. 417 e-117
Alignment gi|NP_001092536.1| calcium-binding mitochondrial carrier protei... 115 7e-26
Alignment gi|NP_001178961.1| solute carrier family 25 member 42 [Bos taur... 109 5e-24
Alignment gi|XP_002688568.1| PREDICTED: solute carrier family 25, member ... 109 5e-24
Alignment gi|NP_777097.1| graves disease carrier protein [Bos taurus]. 106 4e-23
>ref|NP_777083.1| ADP/ATP translocase 1 [Bos taurus].
Length = 298
Score = 567 bits (1461), Expect = e-162
Identities = 282/298 (94%), Positives = 284/298 (95%)
Frame = +2
Query: 137 MSDQAWSFLKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQISAEKQYKGIIDCVVR 316
MSDQA SFLKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQISAEKQYKGIIDCVVR
Sbjct: 1 MSDQALSFLKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQISAEKQYKGIIDCVVR 60
Query: 317 IPKEQGFLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDRHKQFWRYFXXXXXXX 496
IPKEQGFLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDRHKQFWRYF
Sbjct: 61 IPKEQGFLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDRHKQFWRYFAGNLASG 120
Query: 497 XXXXXTSLCFVYPLDFARTRLAADVGKGAAQREFTGLGNCLAKIFKSDGLRGLYQGFNVS 676
TSLCFVYPLDFARTRLAADVGKGAAQREFTGLGNC+ KIFKSDGLRGLYQGFNVS
Sbjct: 121 GAAGATSLCFVYPLDFARTRLAADVGKGAAQREFTGLGNCITKIFKSDGLRGLYQGFNVS 180
Query: 677 VQGIIIYRAAYFGVYDTAKGMLPDPKNVHIIVSWMIAQTVTAVAGLVSYPFDTVRRRMMM 856
VQGIIIYRAAYFGVYDTAKGMLPDPKNVHIIVSWMIAQTVTAVAGLVSYPFDTVRRRMMM
Sbjct: 181 VQGIIIYRAAYFGVYDTAKGMLPDPKNVHIIVSWMIAQTVTAVAGLVSYPFDTVRRRMMM 240
Query: 857 QSGRKGADIMYTGTVDCWRKIAKDEGPKAFFKGAWSNVLRGMGGAFVLVLYDEIKKYV 1030
QSGRKGADIMYTGTVDCWRKIAKDEGPKAFFKGAWSNVLRGMGGAFVLVLYDEIKK+V
Sbjct: 241 QSGRKGADIMYTGTVDCWRKIAKDEGPKAFFKGAWSNVLRGMGGAFVLVLYDEIKKFV 298
>ref|NP_777084.1| ADP/ATP translocase 2 [Bos taurus].
Length = 298
Score = 524 bits (1349), Expect = e-149
Identities = 256/297 (86%), Positives = 270/297 (90%)
Frame = +2
Query: 137 MSDQAWSFLKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQISAEKQYKGIIDCVVR 316
M+D A SF KDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQI+A+KQYKGIIDCVVR
Sbjct: 1 MTDAAVSFAKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQITADKQYKGIIDCVVR 60
Query: 317 IPKEQGFLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDRHKQFWRYFXXXXXXX 496
IPKEQG LSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVD+ QFWRYF
Sbjct: 61 IPKEQGVLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDKRTQFWRYFAGNLASG 120
Query: 497 XXXXXTSLCFVYPLDFARTRLAADVGKGAAQREFTGLGNCLAKIFKSDGLRGLYQGFNVS 676
TSLCFVYPLDFARTRLAADVGK A+REF GLG+CL KI+KSDG+RGLYQGFNVS
Sbjct: 121 GAAGATSLCFVYPLDFARTRLAADVGKAGAEREFRGLGDCLVKIYKSDGIRGLYQGFNVS 180
Query: 677 VQGIIIYRAAYFGVYDTAKGMLPDPKNVHIIVSWMIAQTVTAVAGLVSYPFDTVRRRMMM 856
VQGIIIYRAAYFG+YDTAKGMLPDPKN HI +SWMIAQ+VTAVAGL SYPFDTVRRRMMM
Sbjct: 181 VQGIIIYRAAYFGIYDTAKGMLPDPKNTHIFISWMIAQSVTAVAGLTSYPFDTVRRRMMM 240
Query: 857 QSGRKGADIMYTGTVDCWRKIAKDEGPKAFFKGAWSNVLRGMGGAFVLVLYDEIKKY 1027
QSGRKG DIMYTGT+DCWRKIA+DEG KAFFKGAWSNVLRGMGGAFVLVLYDEIKK+
Sbjct: 241 QSGRKGTDIMYTGTLDCWRKIARDEGAKAFFKGAWSNVLRGMGGAFVLVLYDEIKKF 297
>ref|NP_777085.1| ADP/ATP translocase 3 [Bos taurus].
Length = 298
Score = 522 bits (1344), Expect = e-148
Identities = 254/298 (85%), Positives = 271/298 (90%)
Frame = +2
Query: 137 MSDQAWSFLKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQISAEKQYKGIIDCVVR 316
M++QA SF KDFLAGG+AAAISKTAVAPIERVKLLLQVQHASKQI+A+KQYKGI+DC+VR
Sbjct: 1 MTEQAISFAKDFLAGGIAAAISKTAVAPIERVKLLLQVQHASKQIAADKQYKGIVDCIVR 60
Query: 317 IPKEQGFLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDRHKQFWRYFXXXXXXX 496
IPKEQG LSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVD+ QFWRYF
Sbjct: 61 IPKEQGVLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDKRTQFWRYFAGNLASG 120
Query: 497 XXXXXTSLCFVYPLDFARTRLAADVGKGAAQREFTGLGNCLAKIFKSDGLRGLYQGFNVS 676
TSLCFVYPLDFARTRLAADVGK ++REF GLG+CL KI KSDG+RGLYQGFNVS
Sbjct: 121 GAAGATSLCFVYPLDFARTRLAADVGKSGSEREFRGLGDCLVKITKSDGIRGLYQGFNVS 180
Query: 677 VQGIIIYRAAYFGVYDTAKGMLPDPKNVHIIVSWMIAQTVTAVAGLVSYPFDTVRRRMMM 856
VQGIIIYRAAYFG+YDTAKGMLPDPKN HI+VSWMIAQTVTAVAG+VSYPFDTVRRRMMM
Sbjct: 181 VQGIIIYRAAYFGIYDTAKGMLPDPKNTHIVVSWMIAQTVTAVAGVVSYPFDTVRRRMMM 240
Query: 857 QSGRKGADIMYTGTVDCWRKIAKDEGPKAFFKGAWSNVLRGMGGAFVLVLYDEIKKYV 1030
QSGRKGADIMY GTVDCWRKI KDEG KAFFKGAWSNVLRGMGGAFVLVLYDE+KK +
Sbjct: 241 QSGRKGADIMYKGTVDCWRKILKDEGGKAFFKGAWSNVLRGMGGAFVLVLYDELKKVI 298
>ref|XP_002689470.1| PREDICTED: ADP/ATP translocase 1-like [Bos taurus].
Length = 401
Score = 455 bits (1171), Expect = e-128
Identities = 226/250 (90%), Positives = 230/250 (92%), Gaps = 2/250 (0%)
Frame = +2
Query: 212 VAPIERVKLLLQVQHASKQISAEKQYKGIIDCVVRIPKEQGFLSFWRGNLANVIRYFPTQ 391
V PIERVKLLLQVQHASKQISAEKQYKGIIDCVVRIPKEQGFLSFWRGNLANVIRYFPTQ
Sbjct: 104 VTPIERVKLLLQVQHASKQISAEKQYKGIIDCVVRIPKEQGFLSFWRGNLANVIRYFPTQ 163
Query: 392 ALNFAFKDKYKQIFLGGVDRHKQFWRYFXXXXXXXXXXXXTSLCFVYPLDFARTRLAADV 571
ALNFAFKDKYKQIFLGGVDRHKQFWRYF TSLCFVYPLDFARTRLAADV
Sbjct: 164 ALNFAFKDKYKQIFLGGVDRHKQFWRYFAGNLASGGAAGATSLCFVYPLDFARTRLAADV 223
Query: 572 GKGAAQREFTGLGNCLAKIFKSDGLRGLYQGFNVS--VQGIIIYRAAYFGVYDTAKGMLP 745
GKGAAQREFTGLGNC+ KIFKSDGLRGLYQGFNVS VQGIIIYRAAYFGVYDTAKGMLP
Sbjct: 224 GKGAAQREFTGLGNCITKIFKSDGLRGLYQGFNVSVQVQGIIIYRAAYFGVYDTAKGMLP 283
Query: 746 DPKNVHIIVSWMIAQTVTAVAGLVSYPFDTVRRRMMMQSGRKGADIMYTGTVDCWRKIAK 925
DPKNVHIIVSWMIAQTVTAVAGLVSYPFDT RRRMMMQSG+KGADIMYTGTVDCWRKIAK
Sbjct: 284 DPKNVHIIVSWMIAQTVTAVAGLVSYPFDTARRRMMMQSGQKGADIMYTGTVDCWRKIAK 343
Query: 926 DEGPKAFFKG 955
DEG + +F G
Sbjct: 344 DEGVRLYFFG 353
>ref|XP_001254615.1| PREDICTED: ADP/ATP translocase 1-like [Bos taurus].
Length = 401
Score = 455 bits (1171), Expect = e-128
Identities = 226/250 (90%), Positives = 230/250 (92%), Gaps = 2/250 (0%)
Frame = +2
Query: 212 VAPIERVKLLLQVQHASKQISAEKQYKGIIDCVVRIPKEQGFLSFWRGNLANVIRYFPTQ 391
V PIERVKLLLQVQHASKQISAEKQYKGIIDCVVRIPKEQGFLSFWRGNLANVIRYFPTQ
Sbjct: 104 VTPIERVKLLLQVQHASKQISAEKQYKGIIDCVVRIPKEQGFLSFWRGNLANVIRYFPTQ 163
Query: 392 ALNFAFKDKYKQIFLGGVDRHKQFWRYFXXXXXXXXXXXXTSLCFVYPLDFARTRLAADV 571
ALNFAFKDKYKQIFLGGVDRHKQFWRYF TSLCFVYPLDFARTRLAADV
Sbjct: 164 ALNFAFKDKYKQIFLGGVDRHKQFWRYFAGNLASGGAAGATSLCFVYPLDFARTRLAADV 223
Query: 572 GKGAAQREFTGLGNCLAKIFKSDGLRGLYQGFNVS--VQGIIIYRAAYFGVYDTAKGMLP 745
GKGAAQREFTGLGNC+ KIFKSDGLRGLYQGFNVS VQGIIIYRAAYFGVYDTAKGMLP
Sbjct: 224 GKGAAQREFTGLGNCITKIFKSDGLRGLYQGFNVSVQVQGIIIYRAAYFGVYDTAKGMLP 283
Query: 746 DPKNVHIIVSWMIAQTVTAVAGLVSYPFDTVRRRMMMQSGRKGADIMYTGTVDCWRKIAK 925
DPKNVHIIVSWMIAQTVTAVAGLVSYPFDT RRRMMMQSG+KGADIMYTGTVDCWRKIAK
Sbjct: 284 DPKNVHIIVSWMIAQTVTAVAGLVSYPFDTARRRMMMQSGQKGADIMYTGTVDCWRKIAK 343
Query: 926 DEGPKAFFKG 955
DEG + +F G
Sbjct: 344 DEGVRLYFFG 353
>ref|NP_001039965.1| ADP/ATP translocase 4 [Bos taurus].
Length = 323
Score = 417 bits (1073), Expect = e-117
Identities = 205/291 (70%), Positives = 238/291 (81%)
Frame = +2
Query: 149 AWSFLKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQISAEKQYKGIIDCVVRIPKE 328
A SF KD LAGGVAAA+SKT VAPIERVKLLLQVQ +SKQIS E QYKGI+DC+VRIP+E
Sbjct: 21 ATSFGKDLLAGGVAAAVSKTTVAPIERVKLLLQVQASSKQISPEAQYKGIVDCLVRIPRE 80
Query: 329 QGFLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDRHKQFWRYFXXXXXXXXXXX 508
QGFLS+WRGNLANVIRYFPTQALNFAFKDKYKQ+F+ GV++ KQFWR+F
Sbjct: 81 QGFLSYWRGNLANVIRYFPTQALNFAFKDKYKQLFMSGVNKEKQFWRWFLANLASGGAAG 140
Query: 509 XTSLCFVYPLDFARTRLAADVGKGAAQREFTGLGNCLAKIFKSDGLRGLYQGFNVSVQGI 688
TSLC VYPLDFARTRL AD+GKG +R+F GLG+C+ KI KSDG+ GLYQGF VSVQGI
Sbjct: 141 ATSLCVVYPLDFARTRLGADIGKGPEERQFKGLGDCIMKIAKSDGIVGLYQGFGVSVQGI 200
Query: 689 IIYRAAYFGVYDTAKGMLPDPKNVHIIVSWMIAQTVTAVAGLVSYPFDTVRRRMMMQSGR 868
I+YRA+YFG YDT KG+LP PK H +VS+ IAQ VT +G++SYPFDTVRRRMMMQSG
Sbjct: 201 IVYRASYFGAYDTVKGLLPKPKETHFLVSFFIAQVVTTCSGILSYPFDTVRRRMMMQSGE 260
Query: 869 KGADIMYTGTVDCWRKIAKDEGPKAFFKGAWSNVLRGMGGAFVLVLYDEIK 1021
A+ Y GT+DC+ KI + EG AFF+GA+SN+LRG GGA VLVLYD+IK
Sbjct: 261 --AERQYKGTLDCFMKIYQQEGIGAFFRGAFSNILRGTGGALVLVLYDKIK 309
>ref|NP_001092536.1| calcium-binding mitochondrial carrier protein SCaMC-1 [Bos taurus].
Length = 477
Score = 115 bits (288), Expect = 7e-26
Identities = 91/301 (30%), Positives = 147/301 (48%), Gaps = 6/301 (1%)
Frame = +2
Query: 140 SDQAWSFLKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQISAEKQYKGIIDCVVRI 319
S Q W + LAGGVA A+S+T+ AP++R+K+++QV H SK SA+ G +V
Sbjct: 191 SGQWW---RQLLAGGVAGAVSRTSTAPLDRLKVMMQV-HGSK--SAKMNIYGGFQQMV-- 242
Query: 320 PKEQGFLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDRHKQFWRYFXXXXXXXX 499
KE G S WRGN NVI+ P A+ F ++YK++ + F R+
Sbjct: 243 -KEGGIRSLWRGNGTNVIKIAPETAVKFWAYEQYKKLLTEEGQKIGTFERF-----VSGS 296
Query: 500 XXXXTSLCFVYPLDFARTRLAADVGKGAAQREFTGLGNCLAKIFKSDGLRGLYQGFNVSV 679
T+ F+YP++ +TRLA VGK +++G+ +C KI K +G+ Y+G+ ++
Sbjct: 297 MAGATAQTFIYPMEVLKTRLA--VGKTG---QYSGMFDCAKKILKYEGMGAFYKGYVPNL 351
Query: 680 QGIIIYRAAYFGVYDTAK-----GMLPDPKNVHIIVSWMIAQTVTAVAGLVSYPFDTVRR 844
GII Y VY+ K D N ++V + L SYP VR
Sbjct: 352 LGIIPYAGIDLAVYELLKSHWLDNFAKDSVNPGVMVLLGCGALSSTCGQLASYPLALVRT 411
Query: 845 RMMMQSGRKGADIMYTGTVDCWRKIAKDEGPKAFFKGAWSNVLRGMGGAFV-LVLYDEIK 1021
RM Q+ + + + V +R+I EG ++G N ++ + + V+Y+ +K
Sbjct: 412 RMQAQAMIEKSPQL--NMVGLFRRILSKEGLPGLYRGITPNFMKVLPAVGISYVVYENMK 469
Query: 1022 K 1024
+
Sbjct: 470 Q 470
>ref|NP_001178961.1| solute carrier family 25 member 42 [Bos taurus].
Length = 318
Score = 109 bits (272), Expect = 5e-24
Identities = 87/284 (30%), Positives = 137/284 (48%), Gaps = 11/284 (3%)
Frame = +2
Query: 161 LKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQISAEKQYKGIIDCVVRIPKEQGFL 340
L L+G +A A++KTAVAP++R K++ QV +SK+ SA++ ++ + + +GFL
Sbjct: 34 LSSLLSGALAGALAKTAVAPLDRTKIIFQV--SSKRFSAKEAFRLLYFTYLH----EGFL 87
Query: 341 SFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDRHKQFWRYFXXXXXXXXXXXXTSL 520
S WRGN A ++R P A+ F+ ++YK++ LG + T+
Sbjct: 88 SLWRGNSATMVRVVPYAAIQFSAHEEYKRL-LGSYYGFRGEALPPWPRLLAGALAGTTAA 146
Query: 521 CFVYPLDFARTRLAADVGKGAAQREFTGLGNCLAKIFKSDGLRGLYQGFNVSVQGIIIYR 700
YPLD R R+A + ++ + + +I + +GL+ LY GF +V G+I Y
Sbjct: 147 SLTYPLDLVRARMAV-----TPKEMYSNIFHVFIRISREEGLKTLYHGFVPTVLGVIPYA 201
Query: 701 AAYFGVYDTAKGM------LPDPKNVHIIVSWMIAQTVTAVAGLV----SYPFDTVRRRM 850
F Y+T K + P P ++ A AGL+ SYP D VRRR
Sbjct: 202 GLSFFTYETLKSLHREYSGRPQPYPFERMI-------FGACAGLIGQSASYPLDVVRRR- 253
Query: 851 MMQSGRKGADIMYTGTVDCWRKIAKDEG-PKAFFKGAWSNVLRG 979
M +G G T V R I ++EG + +KG N L+G
Sbjct: 254 MQTAGVTGH--QRTSIVRTMRTIVREEGVVRGLYKGLSMNWLKG 295
>ref|XP_002688568.1| PREDICTED: solute carrier family 25, member 42-like [Bos taurus].
Length = 318
Score = 109 bits (272), Expect = 5e-24
Identities = 87/284 (30%), Positives = 137/284 (48%), Gaps = 11/284 (3%)
Frame = +2
Query: 161 LKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQISAEKQYKGIIDCVVRIPKEQGFL 340
L L+G +A A++KTAVAP++R K++ QV +SK+ SA++ ++ + + +GFL
Sbjct: 34 LSSLLSGALAGALAKTAVAPLDRTKIIFQV--SSKRFSAKEAFRLLYFTYLH----EGFL 87
Query: 341 SFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDRHKQFWRYFXXXXXXXXXXXXTSL 520
S WRGN A ++R P A+ F+ ++YK++ LG + T+
Sbjct: 88 SLWRGNSATMVRVVPYAAIQFSAHEEYKRL-LGSYYGFRGEALPPWPRLLAGALAGTTAA 146
Query: 521 CFVYPLDFARTRLAADVGKGAAQREFTGLGNCLAKIFKSDGLRGLYQGFNVSVQGIIIYR 700
YPLD R R+A + ++ + + +I + +GL+ LY GF +V G+I Y
Sbjct: 147 SLTYPLDLVRARMAV-----TPKEMYSNIFHVFIRISREEGLKTLYHGFVPTVLGVIPYA 201
Query: 701 AAYFGVYDTAKGM------LPDPKNVHIIVSWMIAQTVTAVAGLV----SYPFDTVRRRM 850
F Y+T K + P P ++ A AGL+ SYP D VRRR
Sbjct: 202 GLSFFTYETLKSLHREYSGRPQPYPFERMI-------FGACAGLIGQSASYPLDVVRRR- 253
Query: 851 MMQSGRKGADIMYTGTVDCWRKIAKDEG-PKAFFKGAWSNVLRG 979
M +G G T V R I ++EG + +KG N L+G
Sbjct: 254 MQTAGVTGH--QRTSIVRTMRTIVREEGVVRGLYKGLSMNWLKG 295
>ref|NP_777097.1| graves disease carrier protein [Bos taurus].
Length = 330
Score = 106 bits (264), Expect = 4e-23
Identities = 76/251 (30%), Positives = 119/251 (47%), Gaps = 18/251 (7%)
Frame = +2
Query: 158 FLKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQISAEKQYKGIIDCVVRIPKEQGF 337
+L+ FLAGG+A +KT VAP++RVK+LLQ + ++ G+ + +PK++G+
Sbjct: 34 WLRSFLAGGIAGCCAKTTVAPLDRVKVLLQAH------NHHYRHLGVFSTLRAVPKKEGY 87
Query: 338 LSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLG--GVDRHKQFWRYFXXXXXXXXXXXX 511
L ++GN A +IR FP A+ F + YK + GV H
Sbjct: 88 LGLYKGNGAMMIRIFPYGAIQFMAFEHYKTLITTKLGVSGH-------VHRLMAGSMAGM 140
Query: 512 TSLCFVYPLDFARTRLAADVGKGAAQREFTGLGNCLAKIF-KSDGLRGLYQGFNVSVQGI 688
T++ YPLD R RLA V KG + +TG+ + I+ K G G Y+G ++ G+
Sbjct: 141 TAVICTYPLDMVRVRLAFQV-KG--EHTYTGIIHAFKTIYAKEGGFLGFYRGLMPTILGM 197
Query: 689 IIYRAAYFGVYDTAKGM----------LPDPKNVHIIV-----SWMIAQTVTAVAGLVSY 823
Y F + T K + P N +++V + + A+A +SY
Sbjct: 198 APYAGVSFFTFGTLKSVGLSYAPTLLGRPSSDNPNVLVLKTHINLLCGGVAGAIAQTISY 257
Query: 824 PFDTVRRRMMM 856
PFD RRRM +
Sbjct: 258 PFDVTRRRMQL 268
Database: RefSeq49_BP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 17,681,374
Number of sequences in database: 33,088
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33088
Number of Hits to DB: 45,639,011
Number of extensions: 1354449
Number of successful extensions: 5544
Number of sequences better than 1.0e-05: 52
Number of HSP's gapped: 5348
Number of HSP's successfully gapped: 70
Length of query: 365
Length of database: 17,681,374
Length adjustment: 104
Effective length of query: 261
Effective length of database: 14,240,222
Effective search space: 3716697942
Effective search space used: 3716697942
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to RefSeqSP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-012803
(1096 letters)
Database: RefSeq49_SP.fasta
24,897 sequences; 11,343,932 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_003133393.1| PREDICTED: ADP/ATP translocase 1-like isofor... 576 e-165
Alignment gi|XP_001927475.1| PREDICTED: ADP/ATP translocase 2 [Sus scrofa]. 524 e-149
Alignment gi|NP_999583.1| ADP/ATP translocase 3 [Sus scrofa]. 519 e-147
Alignment gi|XP_003129255.2| PREDICTED: ADP/ATP translocase 4-like [Sus s... 223 1e-58
Alignment gi|NP_001186292.1| calcium-binding mitochondrial carrier protei... 119 2e-27
Alignment gi|XP_001927950.1| PREDICTED: graves disease carrier protein-li... 104 1e-22
Alignment gi|XP_003133528.2| PREDICTED: calcium-binding mitochondrial car... 103 2e-22
Alignment gi|XP_001927624.1| PREDICTED: solute carrier family 25 member 4... 97 1e-20
Alignment gi|NP_001157982.1| calcium-binding mitochondrial carrier protei... 95 6e-20
Alignment gi|XP_003130208.2| PREDICTED: calcium-binding mitochondrial car... 94 2e-19
>ref|XP_003133393.1| PREDICTED: ADP/ATP translocase 1-like isoform 2 [Sus scrofa].
Length = 298
Score = 576 bits (1484), Expect = e-165
Identities = 286/298 (95%), Positives = 286/298 (95%)
Frame = +2
Query: 137 MSDQAWSFLKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQISAEKQYKGIIDCVVR 316
MSDQAWSFLKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQISAEKQYKGIIDCVVR
Sbjct: 1 MSDQAWSFLKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQISAEKQYKGIIDCVVR 60
Query: 317 IPKEQGFLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDRHKQFWRYFXXXXXXX 496
IPKEQGFLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDRHKQFWRYF
Sbjct: 61 IPKEQGFLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDRHKQFWRYFAGNLASG 120
Query: 497 XXXXXTSLCFVYPLDFARTRLAADVGKGAAQREFTGLGNCLAKIFKSDGLRGLYQGFNVS 676
TSLCFVYPLDFARTRLAADVGKGAAQREFTGLGNCLAKIFKSDGLRGLYQGFNVS
Sbjct: 121 GAAGATSLCFVYPLDFARTRLAADVGKGAAQREFTGLGNCLAKIFKSDGLRGLYQGFNVS 180
Query: 677 VQGIIIYRAAYFGVYDTAKGMLPDPKNVHIIVSWMIAQTVTAVAGLVSYPFDTVRRRMMM 856
VQGIIIYRAAYFGVYDTAKGMLPDPKNVHIIVSWMIAQTVTAVAGLVSYPFDTVRRRMMM
Sbjct: 181 VQGIIIYRAAYFGVYDTAKGMLPDPKNVHIIVSWMIAQTVTAVAGLVSYPFDTVRRRMMM 240
Query: 857 QSGRKGADIMYTGTVDCWRKIAKDEGPKAFFKGAWSNVLRGMGGAFVLVLYDEIKKYV 1030
QSGRKGADIMYTGTVDCWRKIAKDEGPKAFFKGAWSNVLRGMGGAFVLVLYDEIKKYV
Sbjct: 241 QSGRKGADIMYTGTVDCWRKIAKDEGPKAFFKGAWSNVLRGMGGAFVLVLYDEIKKYV 298
>ref|XP_001927475.1| PREDICTED: ADP/ATP translocase 2 [Sus scrofa].
Length = 298
Score = 524 bits (1349), Expect = e-149
Identities = 256/297 (86%), Positives = 270/297 (90%)
Frame = +2
Query: 137 MSDQAWSFLKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQISAEKQYKGIIDCVVR 316
M+D A SF KDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQI+A+KQYKGIIDCVVR
Sbjct: 1 MTDAAVSFAKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQITADKQYKGIIDCVVR 60
Query: 317 IPKEQGFLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDRHKQFWRYFXXXXXXX 496
IPKEQG LSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVD+ QFWRYF
Sbjct: 61 IPKEQGVLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDKRTQFWRYFAGNLASG 120
Query: 497 XXXXXTSLCFVYPLDFARTRLAADVGKGAAQREFTGLGNCLAKIFKSDGLRGLYQGFNVS 676
TSLCFVYPLDFARTRLAADVGK A+REF GLG+CL KI+KSDG+RGLYQGFNVS
Sbjct: 121 GAAGATSLCFVYPLDFARTRLAADVGKAGAEREFRGLGDCLVKIYKSDGIRGLYQGFNVS 180
Query: 677 VQGIIIYRAAYFGVYDTAKGMLPDPKNVHIIVSWMIAQTVTAVAGLVSYPFDTVRRRMMM 856
VQGIIIYRAAYFG+YDTAKGMLPDPKN HI +SWMIAQ+VTAVAGL SYPFDTVRRRMMM
Sbjct: 181 VQGIIIYRAAYFGIYDTAKGMLPDPKNTHIFISWMIAQSVTAVAGLTSYPFDTVRRRMMM 240
Query: 857 QSGRKGADIMYTGTVDCWRKIAKDEGPKAFFKGAWSNVLRGMGGAFVLVLYDEIKKY 1027
QSGRKG DIMYTGT+DCWRKIA+DEG KAFFKGAWSNVLRGMGGAFVLVLYDEIKK+
Sbjct: 241 QSGRKGTDIMYTGTLDCWRKIARDEGAKAFFKGAWSNVLRGMGGAFVLVLYDEIKKF 297
>ref|NP_999583.1| ADP/ATP translocase 3 [Sus scrofa].
Length = 298
Score = 519 bits (1337), Expect = e-147
Identities = 253/298 (84%), Positives = 270/298 (90%)
Frame = +2
Query: 137 MSDQAWSFLKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQISAEKQYKGIIDCVVR 316
M++QA SF KDFLAGG+AAAISKTAVAPIERVKLLLQVQHASKQI+A+KQYKGI+DC+VR
Sbjct: 1 MTEQAISFAKDFLAGGIAAAISKTAVAPIERVKLLLQVQHASKQIAADKQYKGIVDCIVR 60
Query: 317 IPKEQGFLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDRHKQFWRYFXXXXXXX 496
IPKEQG LSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVD+H QFWRYF
Sbjct: 61 IPKEQGVLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDKHTQFWRYFAGNLASG 120
Query: 497 XXXXXTSLCFVYPLDFARTRLAADVGKGAAQREFTGLGNCLAKIFKSDGLRGLYQGFNVS 676
TSLCFVYPLDFARTRLAADVGK A +REF GLG+CL KI KSDG+RGLYQGFNVS
Sbjct: 121 GAAGATSLCFVYPLDFARTRLAADVGKSATEREFKGLGDCLVKITKSDGIRGLYQGFNVS 180
Query: 677 VQGIIIYRAAYFGVYDTAKGMLPDPKNVHIIVSWMIAQTVTAVAGLVSYPFDTVRRRMMM 856
VQGIIIYRAAYFGVY TAKGMLPDP+N HI+VSWMIAQTVTAVAG+ SYPFDTVRRRMMM
Sbjct: 181 VQGIIIYRAAYFGVYGTAKGMLPDPRNTHIVVSWMIAQTVTAVAGVFSYPFDTVRRRMMM 240
Query: 857 QSGRKGADIMYTGTVDCWRKIAKDEGPKAFFKGAWSNVLRGMGGAFVLVLYDEIKKYV 1030
QSGRKGADIMY GT+DCWRKI KDEG KAFFKGAWSNVLRGMGGAFVLVLYDE+KK +
Sbjct: 241 QSGRKGADIMYKGTLDCWRKIFKDEGGKAFFKGAWSNVLRGMGGAFVLVLYDELKKVI 298
>ref|XP_003129255.2| PREDICTED: ADP/ATP translocase 4-like [Sus scrofa].
Length = 173
Score = 223 bits (568), Expect = 1e-58
Identities = 109/144 (75%), Positives = 121/144 (84%)
Frame = +2
Query: 149 AWSFLKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQISAEKQYKGIIDCVVRIPKE 328
A SF KD LAGGVAAA+SKTAVAPIERVKLLLQVQ +SKQIS E QYKGI+DC+VRIP+E
Sbjct: 21 AGSFGKDLLAGGVAAAVSKTAVAPIERVKLLLQVQASSKQISPEAQYKGIVDCLVRIPRE 80
Query: 329 QGFLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDRHKQFWRYFXXXXXXXXXXX 508
QGF S+WRGNLANVIRYFPTQALNFAFKDKYKQ+F+ GV++ KQFWR+F
Sbjct: 81 QGFFSYWRGNLANVIRYFPTQALNFAFKDKYKQLFMSGVNKEKQFWRWFLANLAAGGAAG 140
Query: 509 XTSLCFVYPLDFARTRLAADVGKG 580
TSLC VYPLDFARTRL AD+GKG
Sbjct: 141 ATSLCVVYPLDFARTRLGADIGKG 164
>ref|NP_001186292.1| calcium-binding mitochondrial carrier protein SCaMC-1-like [Sus
scrofa].
Length = 477
Score = 119 bits (299), Expect = 2e-27
Identities = 94/303 (31%), Positives = 148/303 (48%), Gaps = 8/303 (2%)
Frame = +2
Query: 140 SDQAWSFLKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQISAEKQ--YKGIIDCVV 313
S Q W + LAGGVA A+S+T+ AP++R+K+++QV H SK +EK Y G V
Sbjct: 191 SGQWW---RQLLAGGVAGAVSRTSTAPLDRLKVMMQV-HGSK---SEKMNIYGGFRQMV- 242
Query: 314 RIPKEQGFLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDRHKQFWRYFXXXXXX 493
KE G S WRGN NVI+ P A+ F ++YK++ + F R+
Sbjct: 243 ---KEGGIRSLWRGNGTNVIKIAPETAVKFWAYEQYKKLLTEEGQKVGTFERFI-----S 294
Query: 494 XXXXXXTSLCFVYPLDFARTRLAADVGKGAAQREFTGLGNCLAKIFKSDGLRGLYQGFNV 673
T+ F+YP++ +TRLA VGK +++G+ +C KI K +G+ Y+G+
Sbjct: 295 GSMAGATAQTFIYPMEVLKTRLA--VGKTG---QYSGIFDCAKKILKHEGMGAFYKGYVP 349
Query: 674 SVQGIIIYRAAYFGVYDTAK-----GMLPDPKNVHIIVSWMIAQTVTAVAGLVSYPFDTV 838
++ GII Y VY+ K D N ++V + L SYP V
Sbjct: 350 NLLGIIPYAGIDLAVYELLKSHWLDNFAKDSVNPGVMVLLGCGALSSTCGQLASYPLALV 409
Query: 839 RRRMMMQSGRKGADIMYTGTVDCWRKIAKDEGPKAFFKGAWSNVLRGMGGAFV-LVLYDE 1015
R RM Q+ +GA + V +R+I EG ++G N ++ + + V+Y+
Sbjct: 410 RTRMQAQAMVEGAPQL--NMVGLFRRIISKEGIPGLYRGITPNFMKVLPAVGISYVVYEN 467
Query: 1016 IKK 1024
+K+
Sbjct: 468 MKQ 470
>ref|XP_001927950.1| PREDICTED: graves disease carrier protein-like [Sus scrofa].
Length = 329
Score = 104 bits (259), Expect = 1e-22
Identities = 75/251 (29%), Positives = 119/251 (47%), Gaps = 18/251 (7%)
Frame = +2
Query: 158 FLKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQISAEKQYKGIIDCVVRIPKEQGF 337
+L+ FLAGG+A +KT VAP++RVK+LLQ + ++ G+ + +P+++G+
Sbjct: 33 WLRSFLAGGIAGCCAKTTVAPLDRVKVLLQAH------NHHYKHLGVFSTLRAVPQKEGY 86
Query: 338 LSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLG--GVDRHKQFWRYFXXXXXXXXXXXX 511
L ++GN A +IR FP A+ F + YK + GV H
Sbjct: 87 LGLYKGNGAMMIRIFPYGAIQFMAFEHYKTLITTKLGVSGH-------VHRLMAGSLAGM 139
Query: 512 TSLCFVYPLDFARTRLAADVGKGAAQREFTGLGNCLAKIF-KSDGLRGLYQGFNVSVQGI 688
T++ YPLD R RLA V KG + +TG+ + I+ K G G Y+G ++ G+
Sbjct: 140 TAVICTYPLDMVRVRLAFQV-KG--EHTYTGIIHAFKTIYAKEGGFLGFYRGLMPTILGM 196
Query: 689 IIYRAAYFGVYDTAKGM----------LPDPKNVHIIV-----SWMIAQTVTAVAGLVSY 823
Y F + T K + P N +++V + + A+A +SY
Sbjct: 197 APYAGVSFFTFGTLKSVGLSHAPTLLGRPSSDNPNVLVLKTHINLICGGVAGAIAQTISY 256
Query: 824 PFDTVRRRMMM 856
PFD RRRM +
Sbjct: 257 PFDVTRRRMQL 267
>ref|XP_003133528.2| PREDICTED: calcium-binding mitochondrial carrier protein Aralar1-like
[Sus scrofa].
Length = 520
Score = 103 bits (256), Expect = 2e-22
Identities = 83/293 (28%), Positives = 128/293 (43%), Gaps = 7/293 (2%)
Frame = +2
Query: 170 FLAGGVAAAISKTAVAPIERVKLLLQVQHASKQISAEKQYKGIIDCVVRIPKEQGFLSFW 349
F G VA A+ TAV PI+ VK +Q Q S + E YK DC ++ + +GF +
Sbjct: 173 FTLGSVAGAVGATAVYPIDLVKTRMQNQRGSGSVVGELMYKNSFDCFKKVLRYEGFFGLY 232
Query: 350 RGNLANVIRYFPTQALNFAFKDKYKQIFL---GGVDRHKQFWRYFXXXXXXXXXXXXTSL 520
RG + +I P +A+ D + F G + + +
Sbjct: 233 RGLIPQLIGVAPEKAIKLTVNDFVRDKFTRRDGSIP--------LLAEVLAGGCAGGSQV 284
Query: 521 CFVYPLDFARTRLAADVGKGAAQREFTGLGNCLAKIFKSDGLRGLYQGFNVSVQGIIIYR 700
F PL+ + RL A TG + + GL GLY+G I +
Sbjct: 285 IFTNPLEIVKIRLQ------VAGEITTGPRVSALNVLRDLGLFGLYKGAKACFLRDIPFS 338
Query: 701 AAYFGVYDTAKGMLPDPKNVHIIVSWMIAQTVTA---VAGLVSYPFDTVRRRMMMQSGRK 871
A YF VY K +L D +N H+ ++A A A LV+ P D ++ R +Q +
Sbjct: 339 AIYFPVYAHCKLLLAD-ENGHVGGLNLLAAGAMAGVPAASLVT-PADVIKTR--LQVAAR 394
Query: 872 GADIMYTGTVDCWRKIAKDEGPKAFFKGAWSNVLRGMGG-AFVLVLYDEIKKY 1027
Y+G +DC+RKI ++EGP AF+KG + V R LV Y+ ++++
Sbjct: 395 AGQTTYSGVIDCFRKILREEGPSAFWKGTAARVFRSSPQFGVTLVTYELLQRW 447
>ref|XP_001927624.1| PREDICTED: solute carrier family 25 member 43 [Sus scrofa].
Length = 341
Score = 97.4 bits (241), Expect = 1e-20
Identities = 70/273 (25%), Positives = 127/273 (46%), Gaps = 5/273 (1%)
Frame = +2
Query: 173 LAGGVAAAISKTAVAPIERVKLLLQVQHASKQISAEKQYKGIIDCVVRIPKEQGFLSFWR 352
L G+A A+S + AP+E +L QV + +G +R+ + +G + W+
Sbjct: 17 LCAGLAGALSLSLTAPLELATVLAQVG------VVRGRARGPWAAGLRVWRAEGPRALWK 70
Query: 353 GNLANVIRYFPTQALNFAFKDKYKQIFLGGVDRHKQFWRYFXXXXXXXXXXXXTSLCFVY 532
GN +R FP A+ A K+ +F + Q WR S Y
Sbjct: 71 GNAVACLRLFPCSAVQLAAYRKFVVLFTDDLGHISQ-WR----SVMAGSLAGMVSTVVTY 125
Query: 533 PLDFARTRLAADVGKGAAQREFTGLGNCLAKIFKSDGLRGLYQGFNVSVQGIIIYRAAYF 712
P D +TRL + + + + G+ + + I++ +GL Y+G +++V G + +
Sbjct: 126 PTDLIKTRL---IVQNMLEPSYRGIFHAFSTIYQQEGLLAFYRGVSLTVLGALPFSVGSL 182
Query: 713 GVYDTAKGMLPDPKN-VHIIVSWMIAQTVTAVAGLVSYPFDTVRRRMMMQSGRK----GA 877
VY + + P++ ++ ++ AV +S+PFDTV+R+M QS G
Sbjct: 183 LVYMNLEKIWNGPRDRFSLLQNFANICLAAAVTQTLSFPFDTVKRKMQAQSPYLPHGGGV 242
Query: 878 DIMYTGTVDCWRKIAKDEGPKAFFKGAWSNVLR 976
D+ ++G VDC+R+I K +G + G +N+L+
Sbjct: 243 DVHFSGAVDCFRQIVKAQGVLGLWNGLAANLLK 275
Score = 55.8 bits (133), Expect = 4e-08
Identities = 43/194 (22%), Positives = 78/194 (40%), Gaps = 4/194 (2%)
Frame = +2
Query: 164 KDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQISAEKQYKGIIDCVVRIPKEQGFLS 343
+ +AG +A +S P + +K L VQ+ E Y+GI I +++G L+
Sbjct: 108 RSVMAGSLAGMVSTVVTYPTDLIKTRLIVQNM-----LEPSYRGIFHAFSTIYQQEGLLA 162
Query: 344 FWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDRHKQFWRYFXXXXXXXXXXXXTSLC 523
F+RG V+ P + ++I+ G DR + +
Sbjct: 163 FYRGVSLTVLGALPFSVGSLLVYMNLEKIWNGPRDRFSLLQNF-----ANICLAAAVTQT 217
Query: 524 FVYPLDFARTRLAADVGK----GAAQREFTGLGNCLAKIFKSDGLRGLYQGFNVSVQGII 691
+P D + ++ A G F+G +C +I K+ G+ GL+ G ++ I+
Sbjct: 218 LSFPFDTVKRKMQAQSPYLPHGGGVDVHFSGAVDCFRQIVKAQGVLGLWNGLAANLLKIV 277
Query: 692 IYRAAYFGVYDTAK 733
Y FG ++ K
Sbjct: 278 PYFGVMFGTFEFCK 291
>ref|NP_001157982.1| calcium-binding mitochondrial carrier protein SCaMC-2 [Sus scrofa].
Length = 501
Score = 95.1 bits (235), Expect = 6e-20
Identities = 78/298 (26%), Positives = 142/298 (47%), Gaps = 6/298 (2%)
Frame = +2
Query: 146 QAWSFLKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQISAEKQYKGIIDCVVRIPK 325
Q + + +AGG A A+S+T AP++R+K+L+QV HAS+ I+ ++ +
Sbjct: 214 QTGMWWRHLVAGGGAGAVSRTCTAPLDRLKVLMQV-HASR-----SNNMCIVGGFTQMIR 267
Query: 326 EQGFLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDRHKQFWRYFXXXXXXXXXX 505
E G S WRGN NV++ P A+ F ++ K+ L G D+
Sbjct: 268 EGGARSLWRGNGINVLKIAPESAIKFMAYEQIKR--LVGTDQETLRIHERLVAGSLAGAI 325
Query: 506 XXTSLCFVYPLDFARTRLAADVGKGAAQREFTGLGNCLAKIFKSDGLRGLYQGFNVSVQG 685
+S +YP++ +TR+A +++G+ +C KI +G+ Y+G+ ++ G
Sbjct: 326 AQSS---IYPMEVLKTRMAL-----RKTGQYSGMLDCARKILAREGVAAFYKGYVPNMLG 377
Query: 686 IIIYRAAYFGVYDTAKGMLPDPKNVHI----IVSWMIAQTVTAVAG-LVSYPFDTVRRRM 850
II Y VY+T K V+ + + T+++ G L SYP VR RM
Sbjct: 378 IIPYAGIDLAVYETLKNAWLQRYAVNSADPGVFVLLACGTMSSTCGQLASYPLALVRTRM 437
Query: 851 MMQSGRKGADIMYTGTVDCWRKIAKDEGPKAFFKGAWSNVLRGMGGAFV-LVLYDEIK 1021
Q+ +GA + ++ +++I + EG ++G N ++ + + V+Y+ +K
Sbjct: 438 QAQASVEGAPEVSMSSL--FKQILRTEGAFGLYRGLAPNFMKVIPAVSISYVVYENLK 493
>ref|XP_003130208.2| PREDICTED: calcium-binding mitochondrial carrier protein Aralar2 [Sus
scrofa].
Length = 675
Score = 93.6 bits (231), Expect = 2e-19
Identities = 73/271 (26%), Positives = 114/271 (42%), Gaps = 2/271 (0%)
Frame = +2
Query: 170 FLAGGVAAAISKTAVAPIERVKLLLQVQHASKQISAEKQYKGIIDCVVRIPKEQGFLSFW 349
F G VA A+ TAV PI+ VK +Q Q ++ E YK DC ++ + +GF +
Sbjct: 332 FGLGSVAGAVGATAVYPIDLVKTRMQNQRSTGSFVGELMYKNSFDCFKKVLRYEGFFGLY 391
Query: 350 RGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDRHKQFWRYFXXXXXXXXXXXXTSLCFV 529
RG L ++ P +A+ D + F+ K + + F
Sbjct: 392 RGLLPQLLGVAPEKAIKLTVNDFVRDKFM-----RKDGSVPLAAEILAGGCAGGSQVIFT 446
Query: 530 YPLDFARTRLAADVGKGAAQREFTGLGNCLAKIFKSDGLRGLYQGFNVSVQGIIIYRAAY 709
PL+ + RL A TG + + G G+Y+G I + A Y
Sbjct: 447 NPLEIVKIRLQ------VAGEITTGPRVSALSVLRDLGFFGIYKGAKACFLRDIPFSAIY 500
Query: 710 FGVYDTAKGMLPDPKNVHIIVSWMIAQTVTAV--AGLVSYPFDTVRRRMMMQSGRKGADI 883
F Y K L S ++A + + A LV+ P D ++ R +Q +
Sbjct: 501 FPCYAHVKASLASEDGQISPGSLLLAGAIAGMPAASLVT-PADVIKTR--LQVAARAGQT 557
Query: 884 MYTGTVDCWRKIAKDEGPKAFFKGAWSNVLR 976
Y+G +DC+ KI ++EGPKA +KGA + V R
Sbjct: 558 TYSGVIDCFWKILREEGPKALWKGAGARVFR 588
Database: RefSeq49_SP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 11,343,932
Number of sequences in database: 24,897
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 24897
Number of Hits to DB: 29,542,535
Number of extensions: 876025
Number of successful extensions: 3626
Number of sequences better than 1.0e-05: 40
Number of HSP's gapped: 3506
Number of HSP's successfully gapped: 57
Length of query: 365
Length of database: 11,343,932
Length adjustment: 100
Effective length of query: 265
Effective length of database: 8,854,232
Effective search space: 2346371480
Effective search space used: 2346371480
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)
Search to RefSeqMP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-012803
(1096 letters)
Database: RefSeq49_MP.fasta
30,036 sequences; 15,617,559 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_031476.3| ADP/ATP translocase 1 [Mus musculus]. 550 e-157
Alignment gi|NP_031477.1| ADP/ATP translocase 2 [Mus musculus]. 524 e-149
Alignment gi|NP_848473.2| ADP/ATP translocase 4 [Mus musculus]. 417 e-117
Alignment gi|NP_766273.1| calcium-binding mitochondrial carrier protein S... 119 3e-27
Alignment gi|NP_001007571.1| solute carrier family 25 member 42 [Mus musc... 111 9e-25
Alignment gi|NP_780403.1| graves disease carrier protein homolog [Mus mus... 103 2e-22
Alignment gi|NP_080153.2| calcium-binding mitochondrial carrier protein S... 101 9e-22
Alignment gi|NP_766024.1| calcium-binding mitochondrial carrier protein A... 101 9e-22
Alignment gi|NP_780542.1| solute carrier family 25 member 41 [Mus musculu... 101 1e-21
Alignment gi|NP_083330.1| RIKEN cDNA 4930443G12 [Mus musculus]. 99 6e-21
>ref|NP_031476.3| ADP/ATP translocase 1 [Mus musculus].
Length = 298
Score = 550 bits (1417), Expect = e-157
Identities = 271/298 (90%), Positives = 280/298 (93%)
Frame = +2
Query: 137 MSDQAWSFLKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQISAEKQYKGIIDCVVR 316
M DQA SFLKDFLAGG+AAA+SKTAVAPIERVKLLLQVQHASKQISAEKQYKGIIDCVVR
Sbjct: 1 MGDQALSFLKDFLAGGIAAAVSKTAVAPIERVKLLLQVQHASKQISAEKQYKGIIDCVVR 60
Query: 317 IPKEQGFLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDRHKQFWRYFXXXXXXX 496
IPKEQGFLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDRHKQFWRYF
Sbjct: 61 IPKEQGFLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDRHKQFWRYFAGNLASG 120
Query: 497 XXXXXTSLCFVYPLDFARTRLAADVGKGAAQREFTGLGNCLAKIFKSDGLRGLYQGFNVS 676
TSLCFVYPLDFARTRLAADVGKG++QREF GLG+CL KIFKSDGL+GLYQGF+VS
Sbjct: 121 GAAGATSLCFVYPLDFARTRLAADVGKGSSQREFNGLGDCLTKIFKSDGLKGLYQGFSVS 180
Query: 677 VQGIIIYRAAYFGVYDTAKGMLPDPKNVHIIVSWMIAQTVTAVAGLVSYPFDTVRRRMMM 856
VQGIIIYRAAYFGVYDTAKGMLPDPKNVHIIVSWMIAQ+VTAVAGLVSYPFDTVRRRMMM
Sbjct: 181 VQGIIIYRAAYFGVYDTAKGMLPDPKNVHIIVSWMIAQSVTAVAGLVSYPFDTVRRRMMM 240
Query: 857 QSGRKGADIMYTGTVDCWRKIAKDEGPKAFFKGAWSNVLRGMGGAFVLVLYDEIKKYV 1030
QSGRKGADIMYTGT+DCWRKIAKDEG AFFKGAWSNVLRGMGGAFVLVLYDEIKKYV
Sbjct: 241 QSGRKGADIMYTGTLDCWRKIAKDEGANAFFKGAWSNVLRGMGGAFVLVLYDEIKKYV 298
>ref|NP_031477.1| ADP/ATP translocase 2 [Mus musculus].
Length = 298
Score = 524 bits (1350), Expect = e-149
Identities = 256/297 (86%), Positives = 270/297 (90%)
Frame = +2
Query: 137 MSDQAWSFLKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQISAEKQYKGIIDCVVR 316
M+D A SF KDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQI+A+KQYKGIIDCVVR
Sbjct: 1 MTDAAVSFAKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQITADKQYKGIIDCVVR 60
Query: 317 IPKEQGFLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDRHKQFWRYFXXXXXXX 496
IPKEQG LSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVD+ QFWRYF
Sbjct: 61 IPKEQGVLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDKRTQFWRYFAGNLASG 120
Query: 497 XXXXXTSLCFVYPLDFARTRLAADVGKGAAQREFTGLGNCLAKIFKSDGLRGLYQGFNVS 676
TSLCFVYPLDFARTRLAADVGK A+REF GLG+CL KI+KSDG++GLYQGFNVS
Sbjct: 121 GAAGATSLCFVYPLDFARTRLAADVGKAGAEREFKGLGDCLVKIYKSDGIKGLYQGFNVS 180
Query: 677 VQGIIIYRAAYFGVYDTAKGMLPDPKNVHIIVSWMIAQTVTAVAGLVSYPFDTVRRRMMM 856
VQGIIIYRAAYFG+YDTAKGMLPDPKN HI +SWMIAQ+VTAVAGL SYPFDTVRRRMMM
Sbjct: 181 VQGIIIYRAAYFGIYDTAKGMLPDPKNTHIFISWMIAQSVTAVAGLTSYPFDTVRRRMMM 240
Query: 857 QSGRKGADIMYTGTVDCWRKIAKDEGPKAFFKGAWSNVLRGMGGAFVLVLYDEIKKY 1027
QSGRKG DIMYTGT+DCWRKIA+DEG KAFFKGAWSNVLRGMGGAFVLVLYDEIKKY
Sbjct: 241 QSGRKGTDIMYTGTLDCWRKIARDEGSKAFFKGAWSNVLRGMGGAFVLVLYDEIKKY 297
>ref|NP_848473.2| ADP/ATP translocase 4 [Mus musculus].
Length = 320
Score = 417 bits (1072), Expect = e-117
Identities = 203/292 (69%), Positives = 241/292 (82%)
Frame = +2
Query: 155 SFLKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQISAEKQYKGIIDCVVRIPKEQG 334
SF KD LAGGVAAA+SKTAVAPIERVKLLLQVQ +SKQIS E +YKG++DC+VRIP+EQG
Sbjct: 20 SFSKDLLAGGVAAAVSKTAVAPIERVKLLLQVQASSKQISPEARYKGMLDCLVRIPREQG 79
Query: 335 FLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDRHKQFWRYFXXXXXXXXXXXXT 514
FLS+WRGNLANVIRYFPTQALNFAFKDKYK++F+ GV++ KQFWR+F T
Sbjct: 80 FLSYWRGNLANVIRYFPTQALNFAFKDKYKELFMSGVNKEKQFWRWFLANLASGGAAGAT 139
Query: 515 SLCFVYPLDFARTRLAADVGKGAAQREFTGLGNCLAKIFKSDGLRGLYQGFNVSVQGIII 694
SLC VYPLDFARTRL D+GKG QR+FTGLG+C+ KI KSDGL GLYQGF VSVQGII+
Sbjct: 140 SLCVVYPLDFARTRLGVDIGKGPEQRQFTGLGDCIMKIAKSDGLIGLYQGFGVSVQGIIV 199
Query: 695 YRAAYFGVYDTAKGMLPDPKNVHIIVSWMIAQTVTAVAGLVSYPFDTVRRRMMMQSGRKG 874
YRA+YFG YDT KG+LP PK +VS++IAQ VT +G++SYPFDTVRRRMMMQSG
Sbjct: 200 YRASYFGAYDTVKGLLPKPKETPFLVSFIIAQIVTTCSGILSYPFDTVRRRMMMQSGE-- 257
Query: 875 ADIMYTGTVDCWRKIAKDEGPKAFFKGAWSNVLRGMGGAFVLVLYDEIKKYV 1030
+D Y GT+DC+ KI + EG AFF+GA+SN+LRG GGA VLVLYD+IK+++
Sbjct: 258 SDRQYKGTIDCFLKIYRHEGVPAFFRGAFSNILRGTGGALVLVLYDKIKEFL 309
>ref|NP_766273.1| calcium-binding mitochondrial carrier protein SCaMC-1 [Mus musculus].
Length = 475
Score = 119 bits (299), Expect = 3e-27
Identities = 86/301 (28%), Positives = 144/301 (47%), Gaps = 6/301 (1%)
Frame = +2
Query: 140 SDQAWSFLKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQISAEKQYKGIIDCVVRI 319
S Q W + LAGGVA A+S+T+ AP++R+K+++QV H SK ++ ++ ++
Sbjct: 191 SGQWW---RQLLAGGVAGAVSRTSTAPLDRLKVMMQV-HGSKSMNIFGGFRQMV------ 240
Query: 320 PKEQGFLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDRHKQFWRYFXXXXXXXX 499
KE G S WRGN NVI+ P A+ F ++YK++ + F R+
Sbjct: 241 -KEGGIRSLWRGNGTNVIKIAPETAVKFWAYEQYKKLLTEEGQKLGTFERFI-----SGS 294
Query: 500 XXXXTSLCFVYPLDFARTRLAADVGKGAAQREFTGLGNCLAKIFKSDGLRGLYQGFNVSV 679
T+ F+YP++ +TRLA A +++G+ C KI K +G Y+G+ ++
Sbjct: 295 MAGATAQTFIYPMEVLKTRLAV-----AKTGQYSGIYGCAKKILKHEGFGAFYKGYIPNL 349
Query: 680 QGIIIYRAAYFGVYDTAK-----GMLPDPKNVHIIVSWMIAQTVTAVAGLVSYPFDTVRR 844
GII Y VY+ K D N ++V + L SYP VR
Sbjct: 350 LGIIPYAGIDLAVYELLKSYWLDNFAKDSVNPGVMVLLSCGALSSTCGQLASYPLALVRT 409
Query: 845 RMMMQSGRKGADIMYTGTVDCWRKIAKDEGPKAFFKGAWSNVLRGMGGAFV-LVLYDEIK 1021
RM Q+ +GA + V +++I EG ++G N ++ + + V+Y+ +K
Sbjct: 410 RMQAQATVEGAPQL--SMVGLFQRIVSKEGVSGLYRGITPNFMKVLPAVGISYVVYENMK 467
Query: 1022 K 1024
+
Sbjct: 468 Q 468
>ref|NP_001007571.1| solute carrier family 25 member 42 [Mus musculus].
Length = 318
Score = 111 bits (278), Expect = 9e-25
Identities = 94/320 (29%), Positives = 149/320 (46%), Gaps = 16/320 (5%)
Frame = +2
Query: 68 GRVRPGRESESAAPGGGVRPAVTMSDQAWSFLKDFLAGGVAAAISKTAVAPIERVKLLLQ 247
G VR ++E+ G AV+ L L+G +A A++KTAVAP++R K++ Q
Sbjct: 8 GSVRLREDAEAVLAG-----AVSSKRDHRQVLSSLLSGALAGALAKTAVAPLDRTKIIFQ 62
Query: 248 VQHASKQISAEKQYKGIIDCVVRIPKEQGFLSFWRGNLANVIRYFPTQALNFAFKDKYKQ 427
V +SK+ SA++ ++ + + +GFLS WRGN A ++R P A+ F+ ++YK+
Sbjct: 63 V--SSKRFSAKEAFRLLYFTYLN----EGFLSLWRGNSATMVRVIPYAAIQFSAHEEYKR 116
Query: 428 I---FLGGVDRHKQFWRYFXXXXXXXXXXXXTSLCFVYPLDFARTRLAADVGKGAAQREF 598
I + G W T+ YPLD R R+A + +
Sbjct: 117 ILGHYYGFRGEALPPW----PRLLAGALAGTTAASLTYPLDLVRARMAV-----TPKEMY 167
Query: 599 TGLGNCLAKIFKSDGLRGLYQGFNVSVQGIIIYRAAYFGVYDTAKGM------LPDPKNV 760
+ + + +I + +GL+ LY GF +V G+I Y F Y++ K + P P
Sbjct: 168 SNIFHVFIRISREEGLKTLYFGFTPTVLGVIPYAGLSFFTYESLKSLHREYSGRPQPYPF 227
Query: 761 HIIVSWMIAQTVTAVAGLV----SYPFDTVRRRMMMQ--SGRKGADIMYTGTVDCWRKIA 922
+V A AGL+ SYP D VRRRM +G + I+ T R I
Sbjct: 228 ERMV-------FGACAGLIGQSASYPLDVVRRRMQTAGVTGHQHGSILST-----LRSIV 275
Query: 923 KDEGP-KAFFKGAWSNVLRG 979
++EG + +KG N L+G
Sbjct: 276 REEGAVRGLYKGLSMNWLKG 295
>ref|NP_780403.1| graves disease carrier protein homolog [Mus musculus].
Length = 332
Score = 103 bits (258), Expect = 2e-22
Identities = 82/279 (29%), Positives = 128/279 (45%), Gaps = 20/279 (7%)
Frame = +2
Query: 80 PGRESESAAPGGGVRPAVTMSDQAWSFLKDFLAGGVAAAISKTAVAPIERVKLLLQVQHA 259
P AA GG S + + +L+ FLAGG+A +KT VAP++RVK+LLQ +
Sbjct: 15 PAPAVPQAAGSGG-----PTSRRDFYWLRSFLAGGIAGCCAKTTVAPLDRVKVLLQAHN- 68
Query: 260 SKQISAEKQYK--GIIDCVVRIPKEQGFLSFWRGNLANVIRYFPTQALNFAFKDKYKQIF 433
+ YK G++ + +P+++G+L ++GN A +IR FP A+ F + YK
Sbjct: 69 -------RHYKHLGVLSTLRAVPQKEGYLGLYKGNGAMMIRIFPYGAIQFMAFEHYKTFI 121
Query: 434 LG--GVDRHKQFWRYFXXXXXXXXXXXXTSLCFVYPLDFARTRLAADVGKGAAQREFTGL 607
GV H T++ YPLD R RLA V KG + ++G+
Sbjct: 122 TTKLGVSGH-------VHRLMAGSMAGMTAVICTYPLDVVRVRLAFQV-KG--EHTYSGI 171
Query: 608 GNCLAKIF-KSDGLRGLYQGFNVSVQGIIIYRAAYFGVYDTAKGM----------LPDPK 754
+ I+ K G G Y+G ++ G+ Y F + T K + P
Sbjct: 172 IHAFKTIYAKEGGFLGFYRGLMPTILGMAPYAGVSFFTFGTLKSVGLSYAPALLGRPSSD 231
Query: 755 NVHIIV-----SWMIAQTVTAVAGLVSYPFDTVRRRMMM 856
N +++V + + A+A +SYPFD RRRM +
Sbjct: 232 NPNVLVLKTHINLLCGGVAGAIAQTISYPFDVTRRRMQL 270
>ref|NP_080153.2| calcium-binding mitochondrial carrier protein SCaMC-3 [Mus musculus].
Length = 467
Score = 101 bits (252), Expect = 9e-22
Identities = 80/293 (27%), Positives = 131/293 (44%), Gaps = 6/293 (2%)
Frame = +2
Query: 164 KDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQISAEKQYKGIIDCVVRIPKEQGFLS 343
K +AG VA A+S+T AP++R+K+ +QV HASK I+ + + +E G LS
Sbjct: 186 KQLVAGAVAGAVSRTGTAPLDRLKVFMQV-HASKS-----NRLNILGGLRNMIQEGGVLS 239
Query: 344 FWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDRHKQFWRYFXXXXXXXXXXXXTSLC 523
WRGN NV++ P A+ F ++ K+ G +Q + T+
Sbjct: 240 LWRGNGINVLKIAPESAIKFMAYEQIKRAIRG-----QQETLHVQERFVAGSLAGATAQT 294
Query: 524 FVYPLDFARTRLAADVGKGAAQREFTGLGNCLAKIFKSDGLRGLYQGFNVSVQGIIIYRA 703
+YP++ +TRL ++ GL +C +I + +G R Y+G+ +V GII Y
Sbjct: 295 IIYPMEVLKTRLTL-----RRTGQYKGLLDCAKRILEREGPRAFYRGYLPNVLGIIPYAG 349
Query: 704 AYFGVYDTAKG-----MLPDPKNVHIIVSWMIAQTVTAVAGLVSYPFDTVRRRMMMQSGR 868
VY+T K + N I+V + + SYP VR RM Q+
Sbjct: 350 IDLAVYETLKNRWLQQYSHESANPGILVLLGCGTISSTCGQIASYPLALVRTRMQAQASI 409
Query: 869 KGADIMYTGTVDCWRKIAKDEGPKAFFKGAWSNVLRGMGGAFV-LVLYDEIKK 1024
+G V R I EG ++G N ++ + + V+Y+ +K+
Sbjct: 410 EGGP--QVSMVGLLRHILSQEGVWGLYRGIAPNFMKVIPAVSISYVVYENMKQ 460
Score = 66.6 bits (161), Expect = 3e-11
Identities = 54/209 (25%), Positives = 90/209 (43%), Gaps = 1/209 (0%)
Frame = +2
Query: 119 VRPAVTMSDQAWSFLKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQISAEKQYKGI 298
++ A+ + + F+AG +A A ++T + P+E +K L ++ QYKG+
Sbjct: 265 IKRAIRGQQETLHVQERFVAGSLAGATAQTIIYPMEVLKTRLTLRRTG-------QYKGL 317
Query: 299 IDCVVRIPKEQGFLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDRHKQFWRYFX 478
+DC RI + +G +F+RG L NV+ P ++ A + K +L H+
Sbjct: 318 LDCAKRILEREGPRAFYRGYLPNVLGIIPYAGIDLAVYETLKNRWLQQYS-HESANPGIL 376
Query: 479 XXXXXXXXXXXTSLCFVYPLDFARTRLAADVG-KGAAQREFTGLGNCLAKIFKSDGLRGL 655
YPL RTR+ A +G Q GL L I +G+ GL
Sbjct: 377 VLLGCGTISSTCGQIASYPLALVRTRMQAQASIEGGPQVSMVGL---LRHILSQEGVWGL 433
Query: 656 YQGFNVSVQGIIIYRAAYFGVYDTAKGML 742
Y+G + +I + + VY+ K L
Sbjct: 434 YRGIAPNFMKVIPAVSISYVVYENMKQAL 462
>ref|NP_766024.1| calcium-binding mitochondrial carrier protein Aralar1 [Mus musculus].
Length = 677
Score = 101 bits (252), Expect = 9e-22
Identities = 81/292 (27%), Positives = 127/292 (43%), Gaps = 6/292 (2%)
Frame = +2
Query: 170 FLAGGVAAAISKTAVAPIERVKLLLQVQHASKQISAEKQYKGIIDCVVRIPKEQGFLSFW 349
F G VA A+ TAV PI+ VK +Q Q + + E YK DC ++ + +GF +
Sbjct: 330 FTLGSVAGAVGATAVYPIDLVKTRMQNQRGTGSVVGELMYKNSFDCFKKVLRYEGFFGLY 389
Query: 350 RGNLANVIRYFPTQALNFAFKDKYKQIFL---GGVDRHKQFWRYFXXXXXXXXXXXXTSL 520
RG + +I P +A+ D + F G + + + +
Sbjct: 390 RGLIPQLIGVAPEKAIKLTVNDFVRDKFTKRDGSIPLPAEI--------LAGGCAGGSQV 441
Query: 521 CFVYPLDFARTRLAADVGKGAAQREFTGLGNCLAKIFKSDGLRGLYQGFNVSVQGIIIYR 700
F PL+ + RL A TG + + GL GLY+G I +
Sbjct: 442 IFTNPLEIVKIRLQ------VAGEITTGPRVSALNVLQDLGLFGLYKGAKACFLRDIPFS 495
Query: 701 AAYFGVYDTAKGMLPDPKNVHIIVSWMIAQTVTAV--AGLVSYPFDTVRRRMMMQSGRKG 874
A YF VY K +L D ++ + A + V A LV+ P D ++ R +Q +
Sbjct: 496 AIYFPVYAHCKLLLADENGRVGGINLLTAGALAGVPAASLVT-PADVIKTR--LQVAARA 552
Query: 875 ADIMYTGTVDCWRKIAKDEGPKAFFKGAWSNVLRGMGG-AFVLVLYDEIKKY 1027
Y+G VDC+RKI ++EGP AF+KG + V R LV Y+ ++++
Sbjct: 553 GQTTYSGVVDCFRKILREEGPSAFWKGTAARVFRSSPQFGVTLVTYELLQRW 604
>ref|NP_780542.1| solute carrier family 25 member 41 [Mus musculus].
Length = 312
Score = 101 bits (251), Expect = 1e-21
Identities = 76/296 (25%), Positives = 136/296 (45%), Gaps = 5/296 (1%)
Frame = +2
Query: 152 WSFLKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQISAEKQYKGIIDCVVRIPKEQ 331
W FL L+G +A A+S+T AP++R ++ +QV S++ ++ ++ + + +E
Sbjct: 30 WKFL---LSGAMAGAVSRTGTAPLDRARVYMQVY------SSKSNFRNLLSGLRSLVQEG 80
Query: 332 GFLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDRHKQFWRYFXXXXXXXXXXXX 511
G S WRGN NV++ P A+ F+ ++ K F G H + F
Sbjct: 81 GVRSLWRGNGINVLKIAPEYAIKFSVCEQSKNFFYG---VHSS--QLFQERVVAGSLAVA 135
Query: 512 TSLCFVYPLDFARTRLAADVGKGAAQREFTGLGNCLAKIFKSDGLRGLYQGFNVSVQGII 691
S + P++ +TRL ++ GL +C +I + DG R LY+G+ ++ GII
Sbjct: 136 VSQTLINPMEVLKTRLTL-----RFTGQYKGLLDCARQILERDGTRALYRGYLPNMLGII 190
Query: 692 IYRAAYFGVYDTAKGMLP----DPKNVHIIVSWMIAQTVTAVAGLVSYPFDTVRRRMMMQ 859
Y VY+ + + D K+ +VS T + SYP VR RM Q
Sbjct: 191 PYACTDLAVYELLQCLWQKLGRDMKDPSGLVSLSSVTLSTTCGQMASYPLTLVRTRMQAQ 250
Query: 860 SGRKGADIMYTGTVDCWRKIAKDEGPKAFFKGAWSNVLRGM-GGAFVLVLYDEIKK 1024
+G++ G +++I +G ++G +L+ + G ++Y+ +KK
Sbjct: 251 DTVEGSNPTMQGV---FKRILSQQGWPGLYRGMTPTLLKVLPAGGISYLVYEAMKK 303
>ref|NP_083330.1| RIKEN cDNA 4930443G12 [Mus musculus].
Length = 473
Score = 99.0 bits (245), Expect = 6e-21
Identities = 81/289 (28%), Positives = 135/289 (46%), Gaps = 9/289 (3%)
Frame = +2
Query: 137 MSDQAWSFLKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQISAEKQYKGIIDCVVR 316
MS + W K +A G+A+AI++T AP+ER+K+ +QVQ S + G++ +
Sbjct: 190 MSGEWW---KRLVAAGIASAITRTCTAPLERLKVTMQVQ------SLKVNKMGLVHMFKQ 240
Query: 317 IPKEQGFLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDRHKQFWRYFXXXXXXX 496
+ KE GF S WRGN N+++ P A+ ++YK++ D R+
Sbjct: 241 MVKEGGFFSLWRGNGVNILKIAPETAIKIGAYEQYKKLLSFDGDHLGVLQRF-----TAG 295
Query: 497 XXXXXTSLCFVYPLDFARTRLAADVGKGAAQREFTGLGNCLAKIFKSDGLRGLYQGFNVS 676
TS VYP++ +TRL + E++GL +C+ K+ K +G++ +G+ +
Sbjct: 296 CMAGATSQTCVYPMEVIKTRLNL-----SKTGEYSGLVDCVRKLLKREGIQAFSKGYVPN 350
Query: 677 VQGIIIYRAAYFGVYDTAK--------GMLPDPKNVHIIVSWMIAQTVTAVAG-LVSYPF 829
+ II Y +++ K G +P + I++ TV+ G L S+P
Sbjct: 351 LLSIIPYAGLDLTIFELLKNHWLEHYAGNSVNP-GIAIVLG---CSTVSHTCGQLASFPL 406
Query: 830 DTVRRRMMMQSGRKGADIMYTGTVDCWRKIAKDEGPKAFFKGAWSNVLR 976
VR RM K M + ++I EG K FF+G NVL+
Sbjct: 407 ILVRTRMQAVMLEKETVRM----MQLIQEIYTKEGKKGFFRGFTPNVLK 451
Database: RefSeq49_MP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 15,617,559
Number of sequences in database: 30,036
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 30036
Number of Hits to DB: 39,175,218
Number of extensions: 1119408
Number of successful extensions: 4570
Number of sequences better than 1.0e-05: 48
Number of HSP's gapped: 4400
Number of HSP's successfully gapped: 69
Length of query: 365
Length of database: 15,617,559
Length adjustment: 103
Effective length of query: 262
Effective length of database: 12,523,851
Effective search space: 3281248962
Effective search space used: 3281248962
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)
Search to RefSeqHP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-012803
(1096 letters)
Database: RefSeq49_HP.fasta
32,964 sequences; 18,297,164 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001142.2| ADP/ATP translocase 1 [Homo sapiens]. 558 e-159
Alignment gi|NP_001627.2| ADP/ATP translocase 3 [Homo sapiens]. 524 e-149
Alignment gi|NP_001143.2| ADP/ATP translocase 2 [Homo sapiens]. 524 e-149
Alignment gi|NP_112581.1| ADP/ATP translocase 4 [Homo sapiens]. 410 e-114
Alignment gi|NP_998816.1| calcium-binding mitochondrial carrier protein S... 118 8e-27
Alignment gi|NP_037518.3| calcium-binding mitochondrial carrier protein S... 118 8e-27
Alignment gi|NP_689920.1| graves disease carrier protein [Homo sapiens]. 107 2e-23
Alignment gi|NP_848621.2| solute carrier family 25 member 42 [Homo sapien... 107 3e-23
Alignment gi|NP_003696.2| calcium-binding mitochondrial carrier protein A... 102 5e-22
Alignment gi|NP_077008.2| calcium-binding mitochondrial carrier protein S... 102 6e-22
>ref|NP_001142.2| ADP/ATP translocase 1 [Homo sapiens].
Length = 298
Score = 558 bits (1437), Expect = e-159
Identities = 275/298 (92%), Positives = 280/298 (93%)
Frame = +2
Query: 137 MSDQAWSFLKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQISAEKQYKGIIDCVVR 316
M D AWSFLKDFLAGGVAAA+SKTAVAPIERVKLLLQVQHASKQISAEKQYKGIIDCVVR
Sbjct: 1 MGDHAWSFLKDFLAGGVAAAVSKTAVAPIERVKLLLQVQHASKQISAEKQYKGIIDCVVR 60
Query: 317 IPKEQGFLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDRHKQFWRYFXXXXXXX 496
IPKEQGFLSFWRGNLANVIRYFPTQALNFAFKDKYKQ+FLGGVDRHKQFWRYF
Sbjct: 61 IPKEQGFLSFWRGNLANVIRYFPTQALNFAFKDKYKQLFLGGVDRHKQFWRYFAGNLASG 120
Query: 497 XXXXXTSLCFVYPLDFARTRLAADVGKGAAQREFTGLGNCLAKIFKSDGLRGLYQGFNVS 676
TSLCFVYPLDFARTRLAADVGKGAAQREF GLG+C+ KIFKSDGLRGLYQGFNVS
Sbjct: 121 GAAGATSLCFVYPLDFARTRLAADVGKGAAQREFHGLGDCIIKIFKSDGLRGLYQGFNVS 180
Query: 677 VQGIIIYRAAYFGVYDTAKGMLPDPKNVHIIVSWMIAQTVTAVAGLVSYPFDTVRRRMMM 856
VQGIIIYRAAYFGVYDTAKGMLPDPKNVHI VSWMIAQ+VTAVAGLVSYPFDTVRRRMMM
Sbjct: 181 VQGIIIYRAAYFGVYDTAKGMLPDPKNVHIFVSWMIAQSVTAVAGLVSYPFDTVRRRMMM 240
Query: 857 QSGRKGADIMYTGTVDCWRKIAKDEGPKAFFKGAWSNVLRGMGGAFVLVLYDEIKKYV 1030
QSGRKGADIMYTGTVDCWRKIAKDEG KAFFKGAWSNVLRGMGGAFVLVLYDEIKKYV
Sbjct: 241 QSGRKGADIMYTGTVDCWRKIAKDEGAKAFFKGAWSNVLRGMGGAFVLVLYDEIKKYV 298
>ref|NP_001627.2| ADP/ATP translocase 3 [Homo sapiens].
Length = 298
Score = 524 bits (1349), Expect = e-149
Identities = 255/298 (85%), Positives = 272/298 (91%)
Frame = +2
Query: 137 MSDQAWSFLKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQISAEKQYKGIIDCVVR 316
M++QA SF KDFLAGG+AAAISKTAVAPIERVKLLLQVQHASKQI+A+KQYKGI+DC+VR
Sbjct: 1 MTEQAISFAKDFLAGGIAAAISKTAVAPIERVKLLLQVQHASKQIAADKQYKGIVDCIVR 60
Query: 317 IPKEQGFLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDRHKQFWRYFXXXXXXX 496
IPKEQG LSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVD+H QFWRYF
Sbjct: 61 IPKEQGVLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDKHTQFWRYFAGNLASG 120
Query: 497 XXXXXTSLCFVYPLDFARTRLAADVGKGAAQREFTGLGNCLAKIFKSDGLRGLYQGFNVS 676
TSLCFVYPLDFARTRLAADVGK +REF GLG+CL KI KSDG+RGLYQGF+VS
Sbjct: 121 GAAGATSLCFVYPLDFARTRLAADVGKSGTEREFRGLGDCLVKITKSDGIRGLYQGFSVS 180
Query: 677 VQGIIIYRAAYFGVYDTAKGMLPDPKNVHIIVSWMIAQTVTAVAGLVSYPFDTVRRRMMM 856
VQGIIIYRAAYFGVYDTAKGMLPDPKN HI+VSWMIAQTVTAVAG+VSYPFDTVRRRMMM
Sbjct: 181 VQGIIIYRAAYFGVYDTAKGMLPDPKNTHIVVSWMIAQTVTAVAGVVSYPFDTVRRRMMM 240
Query: 857 QSGRKGADIMYTGTVDCWRKIAKDEGPKAFFKGAWSNVLRGMGGAFVLVLYDEIKKYV 1030
QSGRKGADIMYTGTVDCWRKI +DEG KAFFKGAWSNVLRGMGGAFVLVLYDE+KK +
Sbjct: 241 QSGRKGADIMYTGTVDCWRKIFRDEGGKAFFKGAWSNVLRGMGGAFVLVLYDELKKVI 298
>ref|NP_001143.2| ADP/ATP translocase 2 [Homo sapiens].
Length = 298
Score = 524 bits (1349), Expect = e-149
Identities = 256/297 (86%), Positives = 270/297 (90%)
Frame = +2
Query: 137 MSDQAWSFLKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQISAEKQYKGIIDCVVR 316
M+D A SF KDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQI+A+KQYKGIIDCVVR
Sbjct: 1 MTDAAVSFAKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQITADKQYKGIIDCVVR 60
Query: 317 IPKEQGFLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDRHKQFWRYFXXXXXXX 496
IPKEQG LSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVD+ QFW YF
Sbjct: 61 IPKEQGVLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDKRTQFWLYFAGNLASG 120
Query: 497 XXXXXTSLCFVYPLDFARTRLAADVGKGAAQREFTGLGNCLAKIFKSDGLRGLYQGFNVS 676
TSLCFVYPLDFARTRLAADVGK A+REF GLG+CL KI+KSDG++GLYQGFNVS
Sbjct: 121 GAAGATSLCFVYPLDFARTRLAADVGKAGAEREFRGLGDCLVKIYKSDGIKGLYQGFNVS 180
Query: 677 VQGIIIYRAAYFGVYDTAKGMLPDPKNVHIIVSWMIAQTVTAVAGLVSYPFDTVRRRMMM 856
VQGIIIYRAAYFG+YDTAKGMLPDPKN HI++SWMIAQTVTAVAGL SYPFDTVRRRMMM
Sbjct: 181 VQGIIIYRAAYFGIYDTAKGMLPDPKNTHIVISWMIAQTVTAVAGLTSYPFDTVRRRMMM 240
Query: 857 QSGRKGADIMYTGTVDCWRKIAKDEGPKAFFKGAWSNVLRGMGGAFVLVLYDEIKKY 1027
QSGRKG DIMYTGT+DCWRKIA+DEG KAFFKGAWSNVLRGMGGAFVLVLYDEIKKY
Sbjct: 241 QSGRKGTDIMYTGTLDCWRKIARDEGGKAFFKGAWSNVLRGMGGAFVLVLYDEIKKY 297
>ref|NP_112581.1| ADP/ATP translocase 4 [Homo sapiens].
Length = 315
Score = 410 bits (1054), Expect = e-114
Identities = 202/293 (68%), Positives = 237/293 (80%)
Frame = +2
Query: 149 AWSFLKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQISAEKQYKGIIDCVVRIPKE 328
A SF KD LAGGVAAA+SKTAVAPIERVKLLLQVQ +SKQIS E +YKG++DC+VRIP+E
Sbjct: 17 ASSFGKDLLAGGVAAAVSKTAVAPIERVKLLLQVQASSKQISPEARYKGMVDCLVRIPRE 76
Query: 329 QGFLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDRHKQFWRYFXXXXXXXXXXX 508
QGF SFWRGNLANVIRYFPTQALNFAFKDKYKQ+F+ GV++ KQFWR+F
Sbjct: 77 QGFFSFWRGNLANVIRYFPTQALNFAFKDKYKQLFMSGVNKEKQFWRWFLANLASGGAAG 136
Query: 509 XTSLCFVYPLDFARTRLAADVGKGAAQREFTGLGNCLAKIFKSDGLRGLYQGFNVSVQGI 688
TSLC VYPLDFARTRL D+GKG +R+F GLG+C+ KI KSDG+ GLYQGF VSVQGI
Sbjct: 137 ATSLCVVYPLDFARTRLGVDIGKGPEERQFKGLGDCIMKIAKSDGIAGLYQGFGVSVQGI 196
Query: 689 IIYRAAYFGVYDTAKGMLPDPKNVHIIVSWMIAQTVTAVAGLVSYPFDTVRRRMMMQSGR 868
I+YRA+YFG YDT KG+LP PK +VS+ IAQ VT +G++SYPFDTVRRRMMMQSG
Sbjct: 197 IVYRASYFGAYDTVKGLLPKPKKTPFLVSFFIAQVVTTCSGILSYPFDTVRRRMMMQSGE 256
Query: 869 KGADIMYTGTVDCWRKIAKDEGPKAFFKGAWSNVLRGMGGAFVLVLYDEIKKY 1027
A Y GT+DC+ KI + EG +FF+GA+SNVLRG GGA VLVLYD+IK++
Sbjct: 257 --AKRQYKGTLDCFVKIYQHEGISSFFRGAFSNVLRGTGGALVLVLYDKIKEF 307
>ref|NP_998816.1| calcium-binding mitochondrial carrier protein SCaMC-1 isoform 2 [Homo
sapiens].
Length = 458
Score = 118 bits (296), Expect = 8e-27
Identities = 89/301 (29%), Positives = 145/301 (48%), Gaps = 6/301 (1%)
Frame = +2
Query: 140 SDQAWSFLKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQISAEKQYKGIIDCVVRI 319
S Q W + LAGG+A A+S+T+ AP++R+K+++QV H SK I ++
Sbjct: 172 SGQWW---RQLLAGGIAGAVSRTSTAPLDRLKIMMQV-HGSK-----SDKMNIFGGFRQM 222
Query: 320 PKEQGFLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDRHKQFWRYFXXXXXXXX 499
KE G S WRGN NVI+ P A+ F ++YK++ + F R+
Sbjct: 223 VKEGGIRSLWRGNGTNVIKIAPETAVKFWAYEQYKKLLTEEGQKIGTFERFI-----SGS 277
Query: 500 XXXXTSLCFVYPLDFARTRLAADVGKGAAQREFTGLGNCLAKIFKSDGLRGLYQGFNVSV 679
T+ F+YP++ +TRLA VGK +++G+ +C KI K +GL Y+G+ ++
Sbjct: 278 MAGATAQTFIYPMEVMKTRLA--VGKTG---QYSGIYDCAKKILKHEGLGAFYKGYVPNL 332
Query: 680 QGIIIYRAAYFGVYDTAK-----GMLPDPKNVHIIVSWMIAQTVTAVAGLVSYPFDTVRR 844
GII Y VY+ K D N ++V + L SYP VR
Sbjct: 333 LGIIPYAGIDLAVYELLKSYWLDNFAKDSVNPGVMVLLGCGALSSTCGQLASYPLALVRT 392
Query: 845 RMMMQSGRKGADIMYTGTVDCWRKIAKDEGPKAFFKGAWSNVLRGMGGAFV-LVLYDEIK 1021
RM Q+ +G+ + V +R+I EG ++G N ++ + + V+Y+ +K
Sbjct: 393 RMQAQAMLEGSPQL--NMVGLFRRIISKEGIPGLYRGITPNFMKVLPAVGISYVVYENMK 450
Query: 1022 K 1024
+
Sbjct: 451 Q 451
>ref|NP_037518.3| calcium-binding mitochondrial carrier protein SCaMC-1 isoform 1 [Homo
sapiens].
Length = 477
Score = 118 bits (296), Expect = 8e-27
Identities = 89/301 (29%), Positives = 145/301 (48%), Gaps = 6/301 (1%)
Frame = +2
Query: 140 SDQAWSFLKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQISAEKQYKGIIDCVVRI 319
S Q W + LAGG+A A+S+T+ AP++R+K+++QV H SK I ++
Sbjct: 191 SGQWW---RQLLAGGIAGAVSRTSTAPLDRLKIMMQV-HGSK-----SDKMNIFGGFRQM 241
Query: 320 PKEQGFLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDRHKQFWRYFXXXXXXXX 499
KE G S WRGN NVI+ P A+ F ++YK++ + F R+
Sbjct: 242 VKEGGIRSLWRGNGTNVIKIAPETAVKFWAYEQYKKLLTEEGQKIGTFERFI-----SGS 296
Query: 500 XXXXTSLCFVYPLDFARTRLAADVGKGAAQREFTGLGNCLAKIFKSDGLRGLYQGFNVSV 679
T+ F+YP++ +TRLA VGK +++G+ +C KI K +GL Y+G+ ++
Sbjct: 297 MAGATAQTFIYPMEVMKTRLA--VGKTG---QYSGIYDCAKKILKHEGLGAFYKGYVPNL 351
Query: 680 QGIIIYRAAYFGVYDTAK-----GMLPDPKNVHIIVSWMIAQTVTAVAGLVSYPFDTVRR 844
GII Y VY+ K D N ++V + L SYP VR
Sbjct: 352 LGIIPYAGIDLAVYELLKSYWLDNFAKDSVNPGVMVLLGCGALSSTCGQLASYPLALVRT 411
Query: 845 RMMMQSGRKGADIMYTGTVDCWRKIAKDEGPKAFFKGAWSNVLRGMGGAFV-LVLYDEIK 1021
RM Q+ +G+ + V +R+I EG ++G N ++ + + V+Y+ +K
Sbjct: 412 RMQAQAMLEGSPQL--NMVGLFRRIISKEGIPGLYRGITPNFMKVLPAVGISYVVYENMK 469
Query: 1022 K 1024
+
Sbjct: 470 Q 470
>ref|NP_689920.1| graves disease carrier protein [Homo sapiens].
Length = 332
Score = 107 bits (267), Expect = 2e-23
Identities = 82/270 (30%), Positives = 125/270 (46%), Gaps = 18/270 (6%)
Frame = +2
Query: 101 AAPGGGVRPAVTMSDQAWSFLKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQISAE 280
AA GG T D W L+ FLAGG+A +KT VAP++RVK+LLQ +
Sbjct: 22 AAGAGG---PTTRRDFYW--LRSFLAGGIAGCCAKTTVAPLDRVKVLLQAH------NHH 70
Query: 281 KQYKGIIDCVVRIPKEQGFLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLG--GVDRH 454
++ G+ + +P+++GFL ++GN A +IR FP A+ F + YK + G+ H
Sbjct: 71 YKHLGVFSALRAVPQKEGFLGLYKGNGAMMIRIFPYGAIQFMAFEHYKTLITTKLGISGH 130
Query: 455 KQFWRYFXXXXXXXXXXXXTSLCFVYPLDFARTRLAADVGKGAAQREFTGLGNCLAKIF- 631
T++ YPLD R RLA V KG + +TG+ + I+
Sbjct: 131 -------VHRLMAGSMAGMTAVICTYPLDMVRVRLAFQV-KG--EHSYTGIIHAFKTIYA 180
Query: 632 KSDGLRGLYQGFNVSVQGIIIYRAAYFGVYDTAKGM----------LPDPKNVHII---- 769
K G G Y+G ++ G+ Y F + T K + P N +++
Sbjct: 181 KEGGFFGFYRGLMPTILGMAPYAGVSFFTFGTLKSVGLSHAPTLLGRPSSDNPNVLVLKT 240
Query: 770 -VSWMIAQTVTAVAGLVSYPFDTVRRRMMM 856
V+ + A+A +SYPFD RRRM +
Sbjct: 241 HVNLLCGGVAGAIAQTISYPFDVTRRRMQL 270
>ref|NP_848621.2| solute carrier family 25 member 42 [Homo sapiens].
Length = 318
Score = 107 bits (266), Expect = 3e-23
Identities = 81/279 (29%), Positives = 132/279 (47%), Gaps = 6/279 (2%)
Frame = +2
Query: 161 LKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQISAEKQYKGIIDCVVRIPKEQGFL 340
L L+G +A A++KTAVAP++R K++ QV +SK+ SA++ ++ + + +GFL
Sbjct: 34 LSSLLSGALAGALAKTAVAPLDRTKIIFQV--SSKRFSAKEAFRVLYYTYLN----EGFL 87
Query: 341 SFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDRHKQFWRYFXXXXXXXXXXXXTSL 520
S WRGN A ++R P A+ F+ ++YK+I LG + T+
Sbjct: 88 SLWRGNSATMVRVVPYAAIQFSAHEEYKRI-LGSYYGFRGEALPPWPRLFAGALAGTTAA 146
Query: 521 CFVYPLDFARTRLAADVGKGAAQREFTGLGNCLAKIFKSDGLRGLYQGFNVSVQGIIIYR 700
YPLD R R+A + ++ + + +I + +GL+ LY GF +V G+I Y
Sbjct: 147 SLTYPLDLVRARMAV-----TPKEMYSNIFHVFIRISREEGLKTLYHGFMPTVLGVIPYA 201
Query: 701 AAYFGVYDTAKGM---LPDPKNVHIIVSWMIAQTVTAVAGLVSYPFDTVRRRMMMQ--SG 865
F Y+T K + + + + + SYP D VRRRM +G
Sbjct: 202 GLSFFTYETLKSLHREYSGRRQPYPFERMIFGACAGLIGQSASYPLDVVRRRMQTAGVTG 261
Query: 866 RKGADIMYTGTVDCWRKIAKDEGP-KAFFKGAWSNVLRG 979
A I T R I ++EG + +KG N ++G
Sbjct: 262 YPRASIART-----LRTIVREEGAVRGLYKGLSMNWVKG 295
>ref|NP_003696.2| calcium-binding mitochondrial carrier protein Aralar1 [Homo sapiens].
Length = 678
Score = 102 bits (255), Expect = 5e-22
Identities = 83/293 (28%), Positives = 128/293 (43%), Gaps = 7/293 (2%)
Frame = +2
Query: 170 FLAGGVAAAISKTAVAPIERVKLLLQVQHASKQISAEKQYKGIIDCVVRIPKEQGFLSFW 349
F G VA A+ TAV PI+ VK +Q Q S + E YK DC ++ + +GF +
Sbjct: 330 FTLGSVAGAVGATAVYPIDLVKTRMQNQRGSGSVVGELMYKNSFDCFKKVLRYEGFFGLY 389
Query: 350 RGNLANVIRYFPTQALNFAFKDKYKQIFL---GGVDRHKQFWRYFXXXXXXXXXXXXTSL 520
RG + +I P +A+ D + F G V + +
Sbjct: 390 RGLIPQLIGVAPEKAIKLTVNDFVRDKFTRRDGSVP--------LPAEVLAGGCAGGSQV 441
Query: 521 CFVYPLDFARTRLAADVGKGAAQREFTGLGNCLAKIFKSDGLRGLYQGFNVSVQGIIIYR 700
F PL+ + RL A TG + + G+ GLY+G I +
Sbjct: 442 IFTNPLEIVKIRLQ------VAGEITTGPRVSALNVLRDLGIFGLYKGAKACFLRDIPFS 495
Query: 701 AAYFGVYDTAKGMLPDPKNVHIIVSWMIAQTVTA---VAGLVSYPFDTVRRRMMMQSGRK 871
A YF VY K +L D +N H+ ++A A A LV+ P D ++ R +Q +
Sbjct: 496 AIYFPVYAHCKLLLAD-ENGHVGGLNLLAAGAMAGVPAASLVT-PADVIKTR--LQVAAR 551
Query: 872 GADIMYTGTVDCWRKIAKDEGPKAFFKGAWSNVLRGMGG-AFVLVLYDEIKKY 1027
Y+G +DC+RKI ++EGP AF+KG + V R LV Y+ ++++
Sbjct: 552 AGQTTYSGVIDCFRKILREEGPSAFWKGTAARVFRSSPQFGVTLVTYELLQRW 604
>ref|NP_077008.2| calcium-binding mitochondrial carrier protein SCaMC-3 [Homo sapiens].
Length = 468
Score = 102 bits (254), Expect = 6e-22
Identities = 81/296 (27%), Positives = 135/296 (45%), Gaps = 9/296 (3%)
Frame = +2
Query: 164 KDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQISAEKQYKGIIDCVVRIPKEQGFLS 343
K +AG VA A+S+T AP++R+K+ +QV HASK I+ + + E G S
Sbjct: 187 KQLVAGAVAGAVSRTGTAPLDRLKVFMQV-HASKT-----NRLNILGGLRSMVLEGGIRS 240
Query: 344 FWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDRHKQFWRYFXXXXXXXXXXXXTSLC 523
WRGN NV++ P A+ F ++ K+ LG +Q + T+
Sbjct: 241 LWRGNGINVLKIAPESAIKFMAYEQIKRAILG-----QQETLHVQERFVAGSLAGATAQT 295
Query: 524 FVYPLDFARTRLAADVGKGAAQREFTGLGNCLAKIFKSDGLRGLYQGFNVSVQGIIIYRA 703
+YP++ +TRL ++ GL +C +I + +G R Y+G+ +V GII Y
Sbjct: 296 IIYPMEVLKTRLTL-----RRTGQYKGLLDCARRILEREGPRAFYRGYLPNVLGIIPYAG 350
Query: 704 AYFGVYDTAKGM--------LPDPKNVHIIVSWMIAQTVTAVAGLVSYPFDTVRRRMMMQ 859
VY+T K DP + ++ I+ T +A SYP VR RM Q
Sbjct: 351 IDLAVYETLKNWWLQQYSHDSADPGILVLLACGTISSTCGQIA---SYPLALVRTRMQAQ 407
Query: 860 SGRKGADIMYTGTVDCWRKIAKDEGPKAFFKGAWSNVLRGMGGAFV-LVLYDEIKK 1024
+ +G + + R I EG + ++G N ++ + + V+Y+ +K+
Sbjct: 408 ASIEGGPQL--SMLGLLRHILSQEGMRGLYRGIAPNFMKVIPAVSISYVVYENMKQ 461
Score = 68.9 bits (167), Expect = 8e-12
Identities = 55/209 (26%), Positives = 90/209 (43%), Gaps = 1/209 (0%)
Frame = +2
Query: 119 VRPAVTMSDQAWSFLKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQISAEKQYKGI 298
++ A+ + + F+AG +A A ++T + P+E +K L ++ QYKG+
Sbjct: 266 IKRAILGQQETLHVQERFVAGSLAGATAQTIIYPMEVLKTRLTLRRTG-------QYKGL 318
Query: 299 IDCVVRIPKEQGFLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDRHKQFWRYFX 478
+DC RI + +G +F+RG L NV+ P ++ A + K +L H
Sbjct: 319 LDCARRILEREGPRAFYRGYLPNVLGIIPYAGIDLAVYETLKNWWLQQYS-HDSADPGIL 377
Query: 479 XXXXXXXXXXXTSLCFVYPLDFARTRLAADVG-KGAAQREFTGLGNCLAKIFKSDGLRGL 655
YPL RTR+ A +G Q GL L I +G+RGL
Sbjct: 378 VLLACGTISSTCGQIASYPLALVRTRMQAQASIEGGPQLSMLGL---LRHILSQEGMRGL 434
Query: 656 YQGFNVSVQGIIIYRAAYFGVYDTAKGML 742
Y+G + +I + + VY+ K L
Sbjct: 435 YRGIAPNFMKVIPAVSISYVVYENMKQAL 463
Database: RefSeq49_HP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,297,164
Number of sequences in database: 32,964
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 32964
Number of Hits to DB: 46,498,764
Number of extensions: 1352464
Number of successful extensions: 5417
Number of sequences better than 1.0e-05: 55
Number of HSP's gapped: 5204
Number of HSP's successfully gapped: 82
Length of query: 365
Length of database: 18,297,164
Length adjustment: 104
Effective length of query: 261
Effective length of database: 14,868,908
Effective search space: 3880784988
Effective search space used: 3880784988
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to Sscrofa10_2
BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-012803
(1096 letters)
Database: Sscrofa_10.2.fasta
4582 sequences; 2,808,509,378 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Sscrofa_Chr15 957 0.0
gb|GL896347.1| Sus scrofa unplaced genomic scaffold chrU_scaffol... 228 5e-57
Sscrofa_ChrX 155 6e-35
>Sscrofa_Chr15
|| Length = 157681621
Score = 957 bits (483), Expect = 0.0
Identities = 489/491 (99%)
Strand = Plus / Plus
Query: 245 caggtccagcatgccagcaaacagatcagtgctgagaagcagtacaaagggatcattgat 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 52923996 caggtccagcatgccagcaaacagatcagtgctgagaagcagtacaaagggatcattgat 52924055
Query: 305 tgcgtggtgagaatccccaaggagcagggctttctctccttctggaggggaaacctggcc 364
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 52924056 tgcgtggtgagaatccccaaggagcagggctttctctccttctggaggggtaacctggcc 52924115
Query: 365 aacgtgatccgttactttcccacccaagctctcaacttcgccttcaaggacaagtacaag 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 52924116 aacgtgatccgttactttcccacccaagctctcaacttcgccttcaaggacaagtacaag 52924175
Query: 425 cagatcttcctggggggtgtggaccggcataagcagttctggcgctactttgctggtaac 484
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 52924176 cagatcttcctggggggcgtggaccggcataagcagttctggcgctactttgctggtaac 52924235
Query: 485 ctggcttccggtggggcagctggggccacctccctctgctttgtctacccgctggacttt 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 52924236 ctggcttccggtggggcagctggggccacctccctctgctttgtctacccgctggacttt 52924295
Query: 545 gctaggaccaggctggctgccgatgtgggcaagggtgccgcccagcgtgagttcactggc 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 52924296 gctaggaccaggctggctgccgatgtgggcaagggtgccgcccagcgtgagttcactggc 52924355
Query: 605 ctgggcaactgtctcgccaagatcttcaagtccgatggcctgcggggtctctaccagggt 664
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 52924356 ctgggcaactgtctcgccaagatcttcaagtccgatggcctgcggggtctctaccagggt 52924415
Query: 665 ttcaacgtctctgtccagggcatcattatctacagagccgcctactttggagtctatgat 724
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 52924416 ttcaacgtctctgtccagggcatcattatctacagagccgcctactttggagtctatgat 52924475
Query: 725 actgccaaggg 735
|||||||||||
Sbjct: 52924476 actgccaaggg 52924486
Score = 490 bits (247), Expect = e-136
Identities = 247/247 (100%)
Strand = Plus / Plus
Query: 3 atataaggcgggttgcagggcgagacaagcggccccttcgcgttgcgcagggactgagca 62
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 52922484 atataaggcgggttgcagggcgagacaagcggccccttcgcgttgcgcagggactgagca 52922543
Query: 63 ggggtggccgtgtcaggccgggcagagaaagcgagagcgcggctcccggaggcggtgtgc 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 52922544 ggggtggccgtgtcaggccgggcagagaaagcgagagcgcggctcccggaggcggtgtgc 52922603
Query: 123 gcccggctgtcaccatgagtgatcaggcttggagctttctgaaggacttcttggctggcg 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 52922604 gcccggctgtcaccatgagtgatcaggcttggagctttctgaaggacttcttggctggcg 52922663
Query: 183 gcgtcgccgctgccatctccaagaccgcggtcgcccccatcgagagggtcaaactgctgc 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 52922664 gcgtcgccgctgccatctccaagaccgcggtcgcccccatcgagagggtcaaactgctgc 52922723
Query: 243 tgcaggt 249
|||||||
Sbjct: 52922724 tgcaggt 52922730
Score = 396 bits (200), Expect = e-107
Identities = 220/224 (98%), Gaps = 2/224 (0%)
Strand = Plus / Plus
Query: 875 gcggatattatgtacactgggacagtggactgctggaggaagatagcaaaagatgaagga 934
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 52926252 gcggatattatgtacactgggacagtggactgctggaggaagatagcaaaagatgaagga 52926311
Query: 935 cccaaggctttcttcaaaggtgcctggtcaaacgtattgagaggcatgggcggtgctttt 994
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 52926312 cccaaggctttcttcaaaggtgcctggtcaaacgtattgagaggcatgggcggtgctttt 52926371
Query: 995 gtattggtattgtatgatgagatcaaaaagtatgtctaatgtaattaaaacttcag-tcc 1053
|||||||||||||||||||||||||||||||||||||||||||||||||||| || |||
Sbjct: 52926372 gtattggtattgtatgatgagatcaaaaagtatgtctaatgtaattaaaactcaagttcc 52926431
Query: 1054 ttggttccagatcca-tgtgtggtttaatagactcttcctaggg 1096
||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 52926432 ttggttccagatccattgtgtggtttaatagactcttcctaggg 52926475
Score = 281 bits (142), Expect = 4e-73
Identities = 142/142 (100%)
Strand = Plus / Plus
Query: 734 gggatgctgcccgaccccaagaatgtgcacattatcgtaagctggatgattgcccagacc 793
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 52925015 gggatgctgcccgaccccaagaatgtgcacattatcgtaagctggatgattgcccagacc 52925074
Query: 794 gtgacggcggtggcagggctggtgtcctacccctttgacactgtccgccgtaggatgatg 853
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 52925075 gtgacggcggtggcagggctggtgtcctacccctttgacactgtccgccgtaggatgatg 52925134
Query: 854 atgcagtctggccggaaagggg 875
||||||||||||||||||||||
Sbjct: 52925135 atgcagtctggccggaaagggg 52925156
>gb|GL896347.1| Sus scrofa unplaced genomic scaffold chrU_scaffold697
Length = 12539
Score = 228 bits (115), Expect = 5e-57
Identities = 379/467 (81%)
Strand = Plus / Plus
Query: 245 caggtccagcatgccagcaaacagatcagtgctgagaagcagtacaaagggatcattgat 304
||||| ||||| |||||||| |||||| || || ||||||||||| || ||| | ||
Sbjct: 4277 caggtgcagcacgccagcaagcagatcgcggccgacaagcagtacaagggcatcgtggac 4336
Query: 305 tgcgtggtgagaatccccaaggagcagggctttctctccttctggaggggaaacctggcc 364
||| | ||| | |||||||||||||||||| | || |||||||||||||| |||||||||
Sbjct: 4337 tgcatcgtgcgcatccccaaggagcagggcgtgctgtccttctggaggggcaacctggcc 4396
Query: 365 aacgtgatccgttactttcccacccaagctctcaacttcgccttcaaggacaagtacaag 424
|| || ||||| ||||| ||||| ||||| |||||||||||||||||||| |||||||||
Sbjct: 4397 aatgtcatccgctacttccccacgcaagccctcaacttcgccttcaaggataagtacaag 4456
Query: 425 cagatcttcctggggggtgtggaccggcataagcagttctggcgctactttgctggtaac 484
||||| |||||||| || |||||| ||| | |||||||||| | || || || || |||
Sbjct: 4457 cagattttcctgggcggcgtggacaagcacacgcagttctggaggtatttcgccggcaac 4516
Query: 485 ctggcttccggtggggcagctggggccacctccctctgctttgtctacccgctggacttt 544
||||| ||||| || || || || ||||||||||||||||| |||||||| ||||| ||
Sbjct: 4517 ctggcctccggcggcgcggccggcgccacctccctctgcttcgtctaccccctggatttc 4576
Query: 545 gctaggaccaggctggctgccgatgtgggcaagggtgccgcccagcgtgagttcactggc 604
|| | ||| | ||||||||||| ||||| || ||| || |||| ||||||| |||
Sbjct: 4577 gcccgaacccgcctggctgccgacgtggggaaatccgccaccgagcgggagttcaaaggc 4636
Query: 605 ctgggcaactgtctcgccaagatcttcaagtccgatggcctgcggggtctctaccagggt 664
|||||| ||||||| | |||||| |||||| || ||| | ||||| || ||||||||
Sbjct: 4637 ctgggcgactgtctggtgaagatcaccaagtctgacggcatccgggggctgtaccagggc 4696
Query: 665 ttcaacgtctctgtccagggcatcattatctacagagccgcctactt 711
|||||||| || || ||||| ||||| |||||| | || ||||||||
Sbjct: 4697 ttcaacgtgtcggtgcagggaatcatcatctaccgggcggcctactt 4743
>Sscrofa_ChrX
|| Length = 144288218
Score = 155 bits (78), Expect = 6e-35
Identities = 246/302 (81%)
Strand = Plus / Minus
Query: 245 caggtccagcatgccagcaaacagatcagtgctgagaagcagtacaaagggatcattgat 304
||||| |||||||||||||| || |||| ||| || ||||| ||||| || ||||| ||
Sbjct: 113744957 caggtgcagcatgccagcaagcaaatcactgcagataagcaatacaagggcatcatagac 113744898
Query: 305 tgcgtggtgagaatccccaaggagcagggctttctctccttctggaggggaaacctggcc 364
|||||||| | ||||||||||||||||| | || ||||||||| | || |||||||||
Sbjct: 113744897 tgcgtggttcgtatccccaaggagcagggagtcctgtccttctggcgtggtaacctggcc 113744838
Query: 365 aacgtgatccgttactttcccacccaagctctcaacttcgccttcaaggacaagtacaag 424
|| || ||| | ||||| ||||| || ||||||||||| || ||||| || || ||||||
Sbjct: 113744837 aatgtcatcagatacttccccacgcaggctctcaactttgcgttcaaagataaatacaag 113744778
Query: 425 cagatcttcctggggggtgtggaccggcataagcagttctggcgctactttgctggtaac 484
|||||||||||||| ||||||||| | | ||||| |||||||||||||| || ||
Sbjct: 113744777 cagatcttcctgggcggtgtggacaagaggacccagttttggcgctactttgcagggaat 113744718
Query: 485 ctggcttccggtggggcagctggggccacctccctctgctttgtctacccgctggacttt 544
||||| || ||||| || ||||||||||| ||| | || ||||| ||||| || ||||||
Sbjct: 113744717 ctggcctcaggtggtgctgctggggccacatccttgtgttttgtgtaccctctcgacttt 113744658
Query: 545 gc 546
||
Sbjct: 113744657 gc 113744656
Score = 75.8 bits (38), Expect = 5e-11
Identities = 74/86 (86%)
Strand = Plus / Minus
Query: 164 aaggacttcttggctggcggcgtcgccgctgccatctccaagaccgcggtcgcccccatc 223
||||||||| |||| || || || ||||| |||||||||||||| || || || ||||||
Sbjct: 113746080 aaggacttcctggcaggtggagtagccgcggccatctccaagactgccgtagcgcccatc 113746021
Query: 224 gagagggtcaaactgctgctgcaggt 249
||| ||||||| ||||||||||||||
Sbjct: 113746020 gagcgggtcaagctgctgctgcaggt 113745995
Database: Sscrofa_10.2.fasta
Posted date: Nov 16, 2011 10:34 AM
Number of letters in database: 2,808,509,378
Number of sequences in database: 4582
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4582
Number of Hits to DB: 26,814,826
Number of extensions: 150
Number of successful extensions: 150
Number of sequences better than 1.0e-05: 3
Number of HSP's gapped: 148
Number of HSP's successfully gapped: 7
Length of query: 1096
Length of database: 2,808,509,378
Length adjustment: 21
Effective length of query: 1075
Effective length of database: 2,808,413,156
Effective search space: 3019044142700
Effective search space used: 3019044142700
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 18 (36.2 bits)
S2: 30 (60.0 bits)