Search to RefSeqBP_Rel49

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-012835
         (1287 letters)

Database: RefSeq49_BP.fasta 
           33,088 sequences; 17,681,374 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_803479.1| glycine N-acyltransferase [Bos taurus].              459   e-129
Alignment   gi|NP_803452.1| glycine N-phenylacetyltransferase [Bos taurus].      402   e-112
Alignment   gi|NP_001095518.1| hypothetical protein LOC518623 [Bos taurus].      399   e-111
Alignment   gi|NP_001178259.1| glycine N-acyltransferase-like protein 2 [Bo...   226   4e-59
Alignment   gi|XP_002693817.1| PREDICTED: glycine-N-acyltransferase-like 2-...   226   4e-59
Alignment   gi|NP_001138533.1| glycine N-acyltransferase-like protein 3 [Bo...   151   1e-36

>ref|NP_803479.1| glycine N-acyltransferase [Bos taurus].
          Length = 295

 Score =  459 bits (1181), Expect = e-129
 Identities = 220/295 (74%), Positives = 246/295 (83%)
 Frame = +2

Query: 173  MFLLQGAQMLQMLENSLRKSLPTSLKVYGTVFHMNQGNPFKLKALVDKWPDFNTVVIRPQ 352
            MFLLQGAQMLQMLE SLRKSLP SLKVYGTV HMN GNPF LKALVDKWPDF TVVIRPQ
Sbjct: 1    MFLLQGAQMLQMLEKSLRKSLPMSLKVYGTVMHMNHGNPFNLKALVDKWPDFQTVVIRPQ 60

Query: 353  EQEMTDDLDHYTNTYHIYSKDLKNCEEFLGLPEVINWKXXXXXXXXXXXXNEVIQKLAAT 532
            EQ+M DDLDHYTNTYH+YS+DLKNC+EFL LPEVINWK            NEVIQ LAAT
Sbjct: 61   EQDMKDDLDHYTNTYHVYSEDLKNCQEFLDLPEVINWKQHLQIQSTQSSLNEVIQNLAAT 120

Query: 533  KSFNVQQTENILYMTLETIKELAPSLLDEKNLSLTDGKPKAIDQEQFQLSSLEPSHAALV 712
            KSF V++++NILYM  ETIKEL PSLLD KNL + DGKPKAID E F+LSS++PSHAA+V
Sbjct: 121  KSFKVKRSKNILYMASETIKELTPSLLDVKNLPVGDGKPKAIDPEMFKLSSVDPSHAAVV 180

Query: 713  NQLWQFGGNERSQRFIERCIRNFPSVCLLGPEGTPIAWSLMDQTGEMRMAGTKLEYRAQG 892
            N+ W FGGNERS RFIERCI++FP+ CLLGPEGTP++WSLMDQTGEMRMAGT  EYRAQG
Sbjct: 181  NRFWLFGGNERSLRFIERCIQSFPNFCLLGPEGTPVSWSLMDQTGEMRMAGTLPEYRAQG 240

Query: 893  LVTYVIFSHSQVLTKLGFPSYSHVDERNKIMQKMSHTLNHLRMPCSWNQWNCVPL 1057
            LVT+ I+  +Q L K GFP YSHVD +N+IMQKMS +LNH+ MP  WNQWNC PL
Sbjct: 241  LVTHAIYQQAQCLLKRGFPVYSHVDPKNQIMQKMSQSLNHVPMPSDWNQWNCEPL 295


>ref|NP_803452.1| glycine N-phenylacetyltransferase [Bos taurus].
          Length = 296

 Score =  402 bits (1032), Expect = e-112
 Identities = 193/296 (65%), Positives = 228/296 (77%), Gaps = 1/296 (0%)
 Frame = +2

Query: 173  MFLLQGAQMLQMLENSLRKSLPTSLKVYGTVFHMNQGNPFKLKALVDKWPDFNTVVIRPQ 352
            MF LQG Q+LQMLE SLRKSLP SLKVYGTVFHMNQGNPF LKALVDKWPDF TVVIRPQ
Sbjct: 1    MFHLQGPQLLQMLEKSLRKSLPESLKVYGTVFHMNQGNPFNLKALVDKWPDFKTVVIRPQ 60

Query: 353  EQEMTDDLDHYTNTYHIYSKDLKNCEE-FLGLPEVINWKXXXXXXXXXXXXNEVIQKLAA 529
            EQEM DD DHYTNTY IYSKDL NC+E  L   +VINWK            NEV+Q LAA
Sbjct: 61   EQEMADDFDHYTNTYQIYSKDLNNCQESXLATSDVINWKQHLQIQSSQSSLNEVVQNLAA 120

Query: 530  TKSFNVQQTENILYMTLETIKELAPSLLDEKNLSLTDGKPKAIDQEQFQLSSLEPSHAAL 709
            TK   V+ T+ ILY+  ET ++L PSL + KNL +  G PKAI+QE F+LSS++P+HAAL
Sbjct: 121  TKFVKVEHTQCILYVMPETARKLLPSLPETKNLPVGYGAPKAINQEMFKLSSMDPTHAAL 180

Query: 710  VNQLWQFGGNERSQRFIERCIRNFPSVCLLGPEGTPIAWSLMDQTGEMRMAGTKLEYRAQ 889
            VN+ W FGGNERSQRFIERCIR FP+ CLLGPEGTP +WSLMDQTGE+RM  T  EYR  
Sbjct: 181  VNKFWHFGGNERSQRFIERCIRAFPTFCLLGPEGTPASWSLMDQTGEIRMGATLPEYRGH 240

Query: 890  GLVTYVIFSHSQVLTKLGFPSYSHVDERNKIMQKMSHTLNHLRMPCSWNQWNCVPL 1057
            GL+++++  H++ L +LG P Y+H D+ NKI+QK+SH L+H+ +P  WNQWNC PL
Sbjct: 241  GLISHMLAVHTRALDQLGIPVYNHTDKANKIVQKVSHNLHHIAIPHGWNQWNCEPL 296


>ref|NP_001095518.1| hypothetical protein LOC518623 [Bos taurus].
          Length = 295

 Score =  399 bits (1025), Expect = e-111
 Identities = 195/295 (66%), Positives = 226/295 (76%)
 Frame = +2

Query: 173  MFLLQGAQMLQMLENSLRKSLPTSLKVYGTVFHMNQGNPFKLKALVDKWPDFNTVVIRPQ 352
            M  LQG QMLQMLE SLRKS+P SLKVYGT FH+NQGNPFKLKALVDKWPDFNTVVIRPQ
Sbjct: 1    MLHLQGPQMLQMLEKSLRKSIPASLKVYGTTFHINQGNPFKLKALVDKWPDFNTVVIRPQ 60

Query: 353  EQEMTDDLDHYTNTYHIYSKDLKNCEEFLGLPEVINWKXXXXXXXXXXXXNEVIQKLAAT 532
            EQEMTDDLDHYTNTY +YSKD K C+EFLG PEVINWK            ++VI+ LAAT
Sbjct: 61   EQEMTDDLDHYTNTYQVYSKDPKKCQEFLGSPEVINWKQHLQIQSSQSSLDDVIKNLAAT 120

Query: 533  KSFNVQQTENILYMTLETIKELAPSLLDEKNLSLTDGKPKAIDQEQFQLSSLEPSHAALV 712
            KS  V+QT+  LYM  E  K+LA SLL+ KN+S   GK K+  Q+   LS+L+P+HA LV
Sbjct: 121  KSGKVKQTQCFLYMASEPGKKLAASLLEAKNVSGDGGKHKSSHQKMLTLSTLDPAHAVLV 180

Query: 713  NQLWQFGGNERSQRFIERCIRNFPSVCLLGPEGTPIAWSLMDQTGEMRMAGTKLEYRAQG 892
            N+LW FGGNERS+RFIERCI+ FPS CLLGPEG P++W LMDQTGE+RMAGT  EYRAQG
Sbjct: 181  NKLWYFGGNERSRRFIERCIQTFPSTCLLGPEGAPVSWMLMDQTGELRMAGTLPEYRAQG 240

Query: 893  LVTYVIFSHSQVLTKLGFPSYSHVDERNKIMQKMSHTLNHLRMPCSWNQWNCVPL 1057
            L++Y+     Q L KLGFP YSHVD+ N IMQK+   +  + +P  WNQWN VPL
Sbjct: 241  LISYISCVQVQTLDKLGFPLYSHVDKANHIMQKVCSNMQSIFVPNGWNQWNFVPL 295


>ref|NP_001178259.1| glycine N-acyltransferase-like protein 2 [Bos taurus].
          Length = 299

 Score =  226 bits (575), Expect = 4e-59
 Identities = 120/297 (40%), Positives = 171/297 (57%), Gaps = 3/297 (1%)
 Frame = +2

Query: 173  MFLLQGAQMLQMLENSLRKSLPTSLKVYGTVFHMNQGNPFKLKALVDKWPDFNTVVIRPQ 352
            MF+L+  Q LQ+L  SL +S+P SLKVYGT+FH+   NPF L+ LVD WP++ TVVIRPQ
Sbjct: 1    MFVLREPQQLQILYESLEESIPESLKVYGTLFHIRNKNPFNLEVLVDAWPEYQTVVIRPQ 60

Query: 353  EQEMTDDLDHYTNTYHIYSKDLKNCEEFLGLPEVINWKXXXXXXXXXXXXNEVIQKLAAT 532
            ++EM DDLD+YTNTYHI++K     EE L  P+VINW+             E IQK+AA+
Sbjct: 61   KEEMKDDLDYYTNTYHIFTKAPDKLEEVLACPQVINWEQAFQIQGCQESLGEAIQKVAAS 120

Query: 533  KSFNVQQTENILYMTLETIKELAPSLLDEKNLSLTDGKPKAID---QEQFQLSSLEPSHA 703
            KS  V     +L++  +   E +    D+ +L      PK ++   +E FQ   L+ SHA
Sbjct: 121  KSVQVDYLRTVLFVFEKPTLEASSG--DKMDLMKLLKIPKVLEDKRKETFQNIFLDVSHA 178

Query: 704  ALVNQLWQFGGNERSQRFIERCIRNFPSVCLLGPEGTPIAWSLMDQTGEMRMAGTKLEYR 883
             LVN+ W+ G NE+S +++ERC++NF    +L  EG PI+W L +Q+ E+RM  T  +YR
Sbjct: 179  RLVNEHWELGKNEKSLKYVERCLQNFAGFGVLSSEGKPISWFLTEQSCEIRMGYTFPKYR 238

Query: 884  AQGLVTYVIFSHSQVLTKLGFPSYSHVDERNKIMQKMSHTLNHLRMPCSWNQWNCVP 1054
             QG +  +             P Y H  E  +  Q+   +     + C W+QW C P
Sbjct: 239  GQGHMWQMGCHSIAYFFSKKIPFYIHAAEDKEKTQQTLLSFGFKNVLCGWHQWKCTP 295


>ref|XP_002693817.1| PREDICTED: glycine-N-acyltransferase-like 2-like [Bos taurus].
          Length = 299

 Score =  226 bits (575), Expect = 4e-59
 Identities = 120/297 (40%), Positives = 171/297 (57%), Gaps = 3/297 (1%)
 Frame = +2

Query: 173  MFLLQGAQMLQMLENSLRKSLPTSLKVYGTVFHMNQGNPFKLKALVDKWPDFNTVVIRPQ 352
            MF+L+  Q LQ+L  SL +S+P SLKVYGT+FH+   NPF L+ LVD WP++ TVVIRPQ
Sbjct: 1    MFVLREPQQLQILYESLEESIPESLKVYGTLFHIRNKNPFNLEVLVDAWPEYQTVVIRPQ 60

Query: 353  EQEMTDDLDHYTNTYHIYSKDLKNCEEFLGLPEVINWKXXXXXXXXXXXXNEVIQKLAAT 532
            ++EM DDLD+YTNTYHI++K     EE L  P+VINW+             E IQK+AA+
Sbjct: 61   KEEMKDDLDYYTNTYHIFTKAPDKLEEVLACPQVINWEQAFQIQGCQESLGEAIQKVAAS 120

Query: 533  KSFNVQQTENILYMTLETIKELAPSLLDEKNLSLTDGKPKAID---QEQFQLSSLEPSHA 703
            KS  V     +L++  +   E +    D+ +L      PK ++   +E FQ   L+ SHA
Sbjct: 121  KSVQVDYLRTVLFVFEKPTLEASSG--DKMDLMKLLKIPKVLEDKRKETFQNIFLDVSHA 178

Query: 704  ALVNQLWQFGGNERSQRFIERCIRNFPSVCLLGPEGTPIAWSLMDQTGEMRMAGTKLEYR 883
             LVN+ W+ G NE+S +++ERC++NF    +L  EG PI+W L +Q+ E+RM  T  +YR
Sbjct: 179  RLVNEHWELGKNEKSLKYVERCLQNFAGFGVLSSEGKPISWFLTEQSCEIRMGYTFPKYR 238

Query: 884  AQGLVTYVIFSHSQVLTKLGFPSYSHVDERNKIMQKMSHTLNHLRMPCSWNQWNCVP 1054
             QG +  +             P Y H  E  +  Q+   +     + C W+QW C P
Sbjct: 239  GQGHMWQMGCHSIAYFFSKKIPFYIHAAEDKEKTQQTLLSFGFKNVLCGWHQWKCTP 295


>ref|NP_001138533.1| glycine N-acyltransferase-like protein 3 [Bos taurus].
          Length = 287

 Score =  151 bits (382), Expect = 1e-36
 Identities = 90/294 (30%), Positives = 147/294 (50%)
 Frame = +2

Query: 173  MFLLQGAQMLQMLENSLRKSLPTSLKVYGTVFHMNQGNPFKLKALVDKWPDFNTVVIRPQ 352
            M +L  +  L +LE  L+   P SLKVYG V ++N+GNPF+ + ++D WPDF  ++ R Q
Sbjct: 1    MQVLNCSTKLLLLEKMLKSHFPESLKVYGAVMNINRGNPFQKEVVLDSWPDFKAIITRRQ 60

Query: 353  EQEMTDDLDHYTNTYHIYSKDLKNCEEFLGLPEVINWKXXXXXXXXXXXXNEVIQKLAAT 532
            ++  TD+LDHYTN Y ++ KD+    + L    VINW              +V + +A +
Sbjct: 61   KEAETDNLDHYTNAYAVFYKDVNAYRQLLEEHGVINWDQVFQIQGLQSELYDVSKAVADS 120

Query: 533  KSFNVQQTENILYMTLETIKELAPSLLDEKNLSLTDGKPKAIDQEQFQLSSLEPSHAALV 712
            K  +V +  +     L  I  +  S L   ++               QL+ L  +   L+
Sbjct: 121  KQVDV-KLASFKAACLPPISTVDTSFLMNSSV---------------QLTYLSIADVDLL 164

Query: 713  NQLWQFGGNERSQRFIERCIRNFPSVCLLGPEGTPIAWSLMDQTGEMRMAGTKLEYRAQG 892
            NQ W  GGNE+ +R+I   I  FPSVC+   +G P++WS+ DQ   M    T  E+R +G
Sbjct: 165  NQTWSRGGNEQCRRYIANLISCFPSVCVRDDKGNPMSWSMTDQFATMCHGYTMPEHRRKG 224

Query: 893  LVTYVIFSHSQVLTKLGFPSYSHVDERNKIMQKMSHTLNHLRMPCSWNQWNCVP 1054
                VI   ++ L   GFP   ++ + N     ++ +++   +PC +++    P
Sbjct: 225  YNRLVILMLARKLQSRGFPCQGNILDDNTTSINLTKSIHSDFLPCRFHRLILTP 278


  Database: RefSeq49_BP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 17,681,374
  Number of sequences in database:  33,088
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33088
Number of Hits to DB: 50,071,640
Number of extensions: 1369188
Number of successful extensions: 4054
Number of sequences better than 1.0e-05: 6
Number of HSP's gapped: 4046
Number of HSP's successfully gapped: 6
Length of query: 429
Length of database: 17,681,374
Length adjustment: 105
Effective length of query: 324
Effective length of database: 14,207,134
Effective search space: 4603111416
Effective search space used: 4603111416
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Animal-Genome cDNA 20110601C-012835

Animal-Genome cDNA 20110601C-012835


Search to RefSeqCP_Rel49

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-012835
         (1287 letters)

Database: RefSeq49_CP.fasta 
           33,336 sequences; 18,874,504 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|XP_540581.1| PREDICTED: similar to glycine-N-acyltransferase...   432   e-121
Alignment   gi|XP_540580.2| PREDICTED: similar to glycine-N-acyltransferase...   396   e-110
Alignment   gi|XP_852587.1| PREDICTED: similar to glycine-N-acyltransferase...   144   2e-34

>ref|XP_540581.1| PREDICTED: similar to glycine-N-acyltransferase isoform a [Canis
            familiaris].
          Length = 294

 Score =  432 bits (1112), Expect = e-121
 Identities = 208/293 (70%), Positives = 235/293 (80%)
 Frame = +2

Query: 179  LLQGAQMLQMLENSLRKSLPTSLKVYGTVFHMNQGNPFKLKALVDKWPDFNTVVIRPQEQ 358
            LLQGAQMLQ LE SLRKSLP SLKVYGTVFHMNQGNPFKLKALVDKWPDF TVVIRPQE+
Sbjct: 2    LLQGAQMLQTLEKSLRKSLPESLKVYGTVFHMNQGNPFKLKALVDKWPDFTTVVIRPQEE 61

Query: 359  EMTDDLDHYTNTYHIYSKDLKNCEEFLGLPEVINWKXXXXXXXXXXXXNEVIQKLAATKS 538
            EM DD DHYTNTY IYSKDLKNC+EFLG PEVINWK            NEV+Q LAATKS
Sbjct: 62   EMIDDFDHYTNTYQIYSKDLKNCQEFLGSPEVINWKQHLQIQSSQPSLNEVMQNLAATKS 121

Query: 539  FNVQQTENILYMTLETIKELAPSLLDEKNLSLTDGKPKAIDQEQFQLSSLEPSHAALVNQ 718
            F V+QT+  L+    TIK+L PSLLD K L+   GKPK I+QE F+LSSL+ +HA  VN+
Sbjct: 122  FQVKQTQCFLFFLANTIKKLVPSLLDVKKLAPGGGKPKPINQEMFKLSSLDVTHATFVNK 181

Query: 719  LWQFGGNERSQRFIERCIRNFPSVCLLGPEGTPIAWSLMDQTGEMRMAGTKLEYRAQGLV 898
             W FGGNERSQRFIERCI+ FP+ CLLGPEGTP++WSLMDQTGE+RMAGT  EY+ QGLV
Sbjct: 182  FWHFGGNERSQRFIERCIQTFPTFCLLGPEGTPVSWSLMDQTGELRMAGTLPEYQGQGLV 241

Query: 899  TYVIFSHSQVLTKLGFPSYSHVDERNKIMQKMSHTLNHLRMPCSWNQWNCVPL 1057
            ++VI+S  Q L KL FP YSH D+ +KIMQKMS+ L+ LRMPC WNQW+C PL
Sbjct: 242  SHVIYSQVQALEKLSFPLYSHTDKSHKIMQKMSYRLHFLRMPCDWNQWHCTPL 294


>ref|XP_540580.2| PREDICTED: similar to glycine-N-acyltransferase (predicted) [Canis
            familiaris].
          Length = 295

 Score =  396 bits (1018), Expect = e-110
 Identities = 190/295 (64%), Positives = 225/295 (76%)
 Frame = +2

Query: 173  MFLLQGAQMLQMLENSLRKSLPTSLKVYGTVFHMNQGNPFKLKALVDKWPDFNTVVIRPQ 352
            MF LQG+Q+LQMLE SLRKSLP SLKVYGT+FHMNQGNPFKLKALVDKWPDF TVV RPQ
Sbjct: 1    MFHLQGSQVLQMLEKSLRKSLPESLKVYGTIFHMNQGNPFKLKALVDKWPDFTTVVTRPQ 60

Query: 353  EQEMTDDLDHYTNTYHIYSKDLKNCEEFLGLPEVINWKXXXXXXXXXXXXNEVIQKLAAT 532
            E+EM DD DHYTNTY IYSK+ +NC+EFLG   VINWK            NEVIQ LAA 
Sbjct: 61   EEEMADDFDHYTNTYQIYSKNPQNCQEFLGASSVINWKQHLQIQSTQSSLNEVIQNLAAA 120

Query: 533  KSFNVQQTENILYMTLETIKELAPSLLDEKNLSLTDGKPKAIDQEQFQLSSLEPSHAALV 712
                V Q + I+Y   E  ++L PSLL+ KNL L  G+ K I+QE F+LSSL+ +HAALV
Sbjct: 121  NLVKVNQQQGIVYTMPERARKLLPSLLEAKNLPLESGRAKTINQEMFKLSSLDVTHAALV 180

Query: 713  NQLWQFGGNERSQRFIERCIRNFPSVCLLGPEGTPIAWSLMDQTGEMRMAGTKLEYRAQG 892
            N+ W FGGNERSQRFIERCI+ FP+ CLLGPEGT ++WSLMDQTGE+RM GT  E+RA+G
Sbjct: 181  NKFWYFGGNERSQRFIERCIQTFPTFCLLGPEGTLVSWSLMDQTGEIRMGGTVPEHRARG 240

Query: 893  LVTYVIFSHSQVLTKLGFPSYSHVDERNKIMQKMSHTLNHLRMPCSWNQWNCVPL 1057
            LV+Y++  H + L KL +P+Y H    NK +QKMSH+L H+ MPC WNQW+CVPL
Sbjct: 241  LVSYLMDIHIRALDKLDYPTYYHTFTSNKPVQKMSHSLGHICMPCDWNQWHCVPL 295


>ref|XP_852587.1| PREDICTED: similar to glycine-N-acyltransferase (predicted) [Canis
            familiaris].
          Length = 273

 Score =  144 bits (362), Expect = 2e-34
 Identities = 85/268 (31%), Positives = 140/268 (52%)
 Frame = +2

Query: 251  VYGTVFHMNQGNPFKLKALVDKWPDFNTVVIRPQEQEMTDDLDHYTNTYHIYSKDLKNCE 430
            VYG V ++N+GNPF+ + +VD WPDF  V+ R Q++  TD+LDHYTN Y ++ KD++  +
Sbjct: 16   VYGAVMNINRGNPFQKEVVVDSWPDFKAVITRRQKEAETDNLDHYTNAYAVFYKDVRAYQ 75

Query: 431  EFLGLPEVINWKXXXXXXXXXXXXNEVIQKLAATKSFNVQQTENILYMTLETIKELAPSL 610
            + L   +VINW              +V + +A +K   V+ T      + + +     S 
Sbjct: 76   QLLEERDVINWDQVFQIQGLQSELCDVSKAVANSKQLGVKLT------SFKAVHFSPHST 129

Query: 611  LDEKNLSLTDGKPKAIDQEQFQLSSLEPSHAALVNQLWQFGGNERSQRFIERCIRNFPSV 790
            L + + SL    P+        L+ L  + A L+N+ W  GGNE+  ++I+  I  FPSV
Sbjct: 130  LPDTS-SLMSSPPR--------LTYLSVTDADLLNRTWSRGGNEQCLQYIKNLISCFPSV 180

Query: 791  CLLGPEGTPIAWSLMDQTGEMRMAGTKLEYRAQGLVTYVIFSHSQVLTKLGFPSYSHVDE 970
            C+   +G P++WSL DQ   M  + T  EYR +G    V  + ++ L   GFPS  +V +
Sbjct: 181  CVRDVKGNPVSWSLTDQFATMCHSYTLPEYRRKGYSRLVALTLARKLQSRGFPSQGNVLD 240

Query: 971  RNKIMQKMSHTLNHLRMPCSWNQWNCVP 1054
             N     +  +++   +PC +++    P
Sbjct: 241  DNMASISLLKSVHAEFLPCRFHRLILTP 268


  Database: RefSeq49_CP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 18,874,504
  Number of sequences in database:  33,336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33336
Number of Hits to DB: 52,193,557
Number of extensions: 1411370
Number of successful extensions: 4092
Number of sequences better than 1.0e-05: 3
Number of HSP's gapped: 4090
Number of HSP's successfully gapped: 3
Length of query: 429
Length of database: 18,874,504
Length adjustment: 106
Effective length of query: 323
Effective length of database: 15,340,888
Effective search space: 4955106824
Effective search space used: 4955106824
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)

Search to RefSeqSP_Rel49

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-012835
         (1287 letters)

Database: RefSeq49_SP.fasta 
           24,897 sequences; 11,343,932 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|XP_003122749.1| PREDICTED: glycine N-acyltransferase-like is...   574   e-164
Alignment   gi|XP_003122748.1| PREDICTED: glycine N-acyltransferase-like is...   574   e-164
Alignment   gi|XP_003122750.2| PREDICTED: glycine N-phenylacetyltransferase...   390   e-109
Alignment   gi|XP_003122754.2| PREDICTED: glycine N-acyltransferase-like [S...   302   2e-82
Alignment   gi|XP_003122785.2| PREDICTED: glycine N-acyltransferase-like pr...   234   8e-62
Alignment   gi|XP_003128486.2| PREDICTED: glycine N-acyltransferase-like pr...   155   5e-38

>ref|XP_003122749.1| PREDICTED: glycine N-acyltransferase-like isoform 2 [Sus scrofa].
          Length = 295

 Score =  574 bits (1480), Expect = e-164
 Identities = 281/295 (95%), Positives = 282/295 (95%)
 Frame = +2

Query: 173  MFLLQGAQMLQMLENSLRKSLPTSLKVYGTVFHMNQGNPFKLKALVDKWPDFNTVVIRPQ 352
            MFLLQGAQMLQMLENSLRKSLPTSLKVYGTVFHMNQGNPFKLKALVDKWPDFNTVVIRPQ
Sbjct: 1    MFLLQGAQMLQMLENSLRKSLPTSLKVYGTVFHMNQGNPFKLKALVDKWPDFNTVVIRPQ 60

Query: 353  EQEMTDDLDHYTNTYHIYSKDLKNCEEFLGLPEVINWKXXXXXXXXXXXXNEVIQKLAAT 532
            EQEMTDDLDHYTNTYHIYSKDLKNCEEFLGLPEVINWK            NEVIQKLAA 
Sbjct: 61   EQEMTDDLDHYTNTYHIYSKDLKNCEEFLGLPEVINWKQHLQIQSSQSSLNEVIQKLAAA 120

Query: 533  KSFNVQQTENILYMTLETIKELAPSLLDEKNLSLTDGKPKAIDQEQFQLSSLEPSHAALV 712
            KSFNVQQTENILYMTLETIKELAPSLLDEKNLSLTDGKPKAIDQEQFQLSSLEPSHAALV
Sbjct: 121  KSFNVQQTENILYMTLETIKELAPSLLDEKNLSLTDGKPKAIDQEQFQLSSLEPSHAALV 180

Query: 713  NQLWQFGGNERSQRFIERCIRNFPSVCLLGPEGTPIAWSLMDQTGEMRMAGTKLEYRAQG 892
            NQLWQFGGNERSQRFIERCIRNFPSVCLLGPEGTPIAWSLMDQTGEMRMAGTKLEYRAQG
Sbjct: 181  NQLWQFGGNERSQRFIERCIRNFPSVCLLGPEGTPIAWSLMDQTGEMRMAGTKLEYRAQG 240

Query: 893  LVTYVIFSHSQVLTKLGFPSYSHVDERNKIMQKMSHTLNHLRMPCSWNQWNCVPL 1057
            LVTYVIFSHSQVLTKLGFPSYSHVD+RNKIMQKMSHTLNHLRMPCSWNQWNCVPL
Sbjct: 241  LVTYVIFSHSQVLTKLGFPSYSHVDKRNKIMQKMSHTLNHLRMPCSWNQWNCVPL 295


>ref|XP_003122748.1| PREDICTED: glycine N-acyltransferase-like isoform 1 [Sus scrofa].
          Length = 295

 Score =  574 bits (1480), Expect = e-164
 Identities = 281/295 (95%), Positives = 282/295 (95%)
 Frame = +2

Query: 173  MFLLQGAQMLQMLENSLRKSLPTSLKVYGTVFHMNQGNPFKLKALVDKWPDFNTVVIRPQ 352
            MFLLQGAQMLQMLENSLRKSLPTSLKVYGTVFHMNQGNPFKLKALVDKWPDFNTVVIRPQ
Sbjct: 1    MFLLQGAQMLQMLENSLRKSLPTSLKVYGTVFHMNQGNPFKLKALVDKWPDFNTVVIRPQ 60

Query: 353  EQEMTDDLDHYTNTYHIYSKDLKNCEEFLGLPEVINWKXXXXXXXXXXXXNEVIQKLAAT 532
            EQEMTDDLDHYTNTYHIYSKDLKNCEEFLGLPEVINWK            NEVIQKLAA 
Sbjct: 61   EQEMTDDLDHYTNTYHIYSKDLKNCEEFLGLPEVINWKQHLQIQSSQSSLNEVIQKLAAA 120

Query: 533  KSFNVQQTENILYMTLETIKELAPSLLDEKNLSLTDGKPKAIDQEQFQLSSLEPSHAALV 712
            KSFNVQQTENILYMTLETIKELAPSLLDEKNLSLTDGKPKAIDQEQFQLSSLEPSHAALV
Sbjct: 121  KSFNVQQTENILYMTLETIKELAPSLLDEKNLSLTDGKPKAIDQEQFQLSSLEPSHAALV 180

Query: 713  NQLWQFGGNERSQRFIERCIRNFPSVCLLGPEGTPIAWSLMDQTGEMRMAGTKLEYRAQG 892
            NQLWQFGGNERSQRFIERCIRNFPSVCLLGPEGTPIAWSLMDQTGEMRMAGTKLEYRAQG
Sbjct: 181  NQLWQFGGNERSQRFIERCIRNFPSVCLLGPEGTPIAWSLMDQTGEMRMAGTKLEYRAQG 240

Query: 893  LVTYVIFSHSQVLTKLGFPSYSHVDERNKIMQKMSHTLNHLRMPCSWNQWNCVPL 1057
            LVTYVIFSHSQVLTKLGFPSYSHVD+RNKIMQKMSHTLNHLRMPCSWNQWNCVPL
Sbjct: 241  LVTYVIFSHSQVLTKLGFPSYSHVDKRNKIMQKMSHTLNHLRMPCSWNQWNCVPL 295


>ref|XP_003122750.2| PREDICTED: glycine N-phenylacetyltransferase-like isoform 1 [Sus
            scrofa].
          Length = 298

 Score =  390 bits (1002), Expect = e-109
 Identities = 192/298 (64%), Positives = 223/298 (74%), Gaps = 3/298 (1%)
 Frame = +2

Query: 173  MFLLQGAQMLQMLENSLRKSLPT---SLKVYGTVFHMNQGNPFKLKALVDKWPDFNTVVI 343
            M  LQ AQML  LE S RK LP    +LKVYGTVFHMNQGNPFKLKALVDKWPDFNTVVI
Sbjct: 1    MLHLQSAQMLLRLEKSGRKYLPCPEDNLKVYGTVFHMNQGNPFKLKALVDKWPDFNTVVI 60

Query: 344  RPQEQEMTDDLDHYTNTYHIYSKDLKNCEEFLGLPEVINWKXXXXXXXXXXXXNEVIQKL 523
            RPQEQEMTDD DH+TNTY IYSKDLKNC E L   +VINWK            +EVIQ L
Sbjct: 61   RPQEQEMTDDFDHHTNTYQIYSKDLKNCHEALSTSDVINWKQHLQIQSSQPSLDEVIQNL 120

Query: 524  AATKSFNVQQTENILYMTLETIKELAPSLLDEKNLSLTDGKPKAIDQEQFQLSSLEPSHA 703
            A TK   V+QT+ ILY+T E   +L PSL + KNL     +PKA +QE FQ+SS++ +HA
Sbjct: 121  ATTKFIKVKQTQRILYITPEMAIKLLPSLPETKNLPPGYSRPKASNQELFQVSSMDVTHA 180

Query: 704  ALVNQLWQFGGNERSQRFIERCIRNFPSVCLLGPEGTPIAWSLMDQTGEMRMAGTKLEYR 883
            ALVN+ W FGGNERSQRFIERCIRNF S+CLLGPEGTPI+WSLMDQTGE+RM  T  EYR
Sbjct: 181  ALVNKFWHFGGNERSQRFIERCIRNFLSICLLGPEGTPISWSLMDQTGEIRMGATLPEYR 240

Query: 884  AQGLVTYVIFSHSQVLTKLGFPSYSHVDERNKIMQKMSHTLNHLRMPCSWNQWNCVPL 1057
             QGL++ ++  H Q L + GFP+Y H D+ NK +QK++H L+H+  PC WNQWNCVPL
Sbjct: 241  GQGLISNLLCVHIQALDERGFPTYMHTDKANKTVQKINHNLHHIPFPCGWNQWNCVPL 298


>ref|XP_003122754.2| PREDICTED: glycine N-acyltransferase-like [Sus scrofa].
          Length = 281

 Score =  302 bits (774), Expect = 2e-82
 Identities = 145/232 (62%), Positives = 174/232 (75%)
 Frame = +2

Query: 359  EMTDDLDHYTNTYHIYSKDLKNCEEFLGLPEVINWKXXXXXXXXXXXXNEVIQKLAATKS 538
            EMTD+LDHYTNTY +YSKD K C+EFLGLPEVINWK            ++VI+ LAA K 
Sbjct: 50   EMTDELDHYTNTYQVYSKDPKKCQEFLGLPEVINWKQHLQIQSTQSSLDDVIKNLAALKL 109

Query: 539  FNVQQTENILYMTLETIKELAPSLLDEKNLSLTDGKPKAIDQEQFQLSSLEPSHAALVNQ 718
              V+QT+ +LYM  E  K++A SLLD KN S  D K K+I Q+  QLSSL+PSHAALVN 
Sbjct: 110  GKVKQTQCLLYMVSELGKKMANSLLDAKNPSPNDNKFKSIHQKILQLSSLDPSHAALVNT 169

Query: 719  LWQFGGNERSQRFIERCIRNFPSVCLLGPEGTPIAWSLMDQTGEMRMAGTKLEYRAQGLV 898
             W FGGNERSQRFIERCI+ FP+ CLLGPEGTP++W LMDQTGEMRMAGT  +YR QGL+
Sbjct: 170  FWYFGGNERSQRFIERCIKTFPNWCLLGPEGTPVSWVLMDQTGEMRMAGTMPKYRRQGLI 229

Query: 899  TYVIFSHSQVLTKLGFPSYSHVDERNKIMQKMSHTLNHLRMPCSWNQWNCVP 1054
            TY+ +  +Q L KLGFP YSHVD  N IMQK++  + ++RMPC WNQWN +P
Sbjct: 230  TYLSYIQTQALNKLGFPMYSHVDRANHIMQKLALNMKNIRMPCDWNQWNFLP 281


>ref|XP_003122785.2| PREDICTED: glycine N-acyltransferase-like protein 2-like [Sus
            scrofa].
          Length = 321

 Score =  234 bits (597), Expect = 8e-62
 Identities = 117/297 (39%), Positives = 176/297 (59%), Gaps = 3/297 (1%)
 Frame = +2

Query: 173  MFLLQGAQMLQMLENSLRKSLPTSLKVYGTVFHMNQGNPFKLKALVDKWPDFNTVVIRPQ 352
            MF+L+    LQ L  +L KSLP S KVYG ++++   NPF L+ LVD WPD+ T++ RPQ
Sbjct: 22   MFVLREPLKLQSLYETLEKSLPESTKVYGAIYNIKNKNPFNLEVLVDAWPDYQTIITRPQ 81

Query: 353  EQEMTDDLDHYTNTYHIYSKDLKNCEEFLGLPEVINWKXXXXXXXXXXXXNEVIQKLAAT 532
            ++EM DDLD+YTNTYHI++K  +  EE L  P+VINW+             E I+K++A+
Sbjct: 82   KEEMKDDLDYYTNTYHIFTKAPEKLEEVLACPQVINWEQAFQIQGCQESVGEAIRKISAS 141

Query: 533  KSFNVQQTENILYMTLETIKELAPSLLDEKNLSLTDGKPKAID---QEQFQLSSLEPSHA 703
            KS  V     +L+M++   K+L  ++ D+ +L       K  +   +E F+   L+ S+A
Sbjct: 142  KSVQVDYKRTMLFMSVNE-KKLKKTIDDKIDLMKVPKMSKEDEDGKKENFRTIFLDASYA 200

Query: 704  ALVNQLWQFGGNERSQRFIERCIRNFPSVCLLGPEGTPIAWSLMDQTGEMRMAGTKLEYR 883
             LVN+ W FG NERS +++ERC++NFP   + GPE  P++W +M+Q+ E+RM  T  +YR
Sbjct: 201  GLVNEHWDFGKNERSLKYVERCLQNFPGFGVWGPEECPVSWVVMEQSCELRMGYTVPKYR 260

Query: 884  AQGLVTYVIFSHSQVLTKLGFPSYSHVDERNKIMQKMSHTLNHLRMPCSWNQWNCVP 1054
             QG +  + +     L     P Y HV E  + +QK+  T+      C W+QW C P
Sbjct: 261  GQGNMWQIAYHFISYLISKNMPFYLHVAEEKEEIQKLMRTVGCKESLCGWHQWICTP 317


>ref|XP_003128486.2| PREDICTED: glycine N-acyltransferase-like protein 3-like [Sus
            scrofa].
          Length = 288

 Score =  155 bits (392), Expect = 5e-38
 Identities = 91/285 (31%), Positives = 145/285 (50%)
 Frame = +2

Query: 173  MFLLQGAQMLQMLENSLRKSLPTSLKVYGTVFHMNQGNPFKLKALVDKWPDFNTVVIRPQ 352
            M +L  +  L  LE  LR   P SLKVYG V ++N+GNPF+ + ++D WP+F  V+ R Q
Sbjct: 1    MLVLNCSTKLLTLEKVLRSHFPESLKVYGAVMNINRGNPFQKEVVLDSWPNFKAVITRRQ 60

Query: 353  EQEMTDDLDHYTNTYHIYSKDLKNCEEFLGLPEVINWKXXXXXXXXXXXXNEVIQKLAAT 532
            ++  TD+LDHYTN Y ++ KD++  ++ L    VINW              +V + +A +
Sbjct: 61   KEAETDNLDHYTNAYAVFYKDVRAYQQLLEEQGVINWDQVFQIQGLQSELYDVSKTVATS 120

Query: 533  KSFNVQQTENILYMTLETIKELAPSLLDEKNLSLTDGKPKAIDQEQFQLSSLEPSHAALV 712
            K  +V+    +         +L+P L     +SL+            +LS L  + A L+
Sbjct: 121  KQLDVK----LASFKAAFFPQLSPPLDTSSLMSLS-----------LKLSCLSVADADLL 165

Query: 713  NQLWQFGGNERSQRFIERCIRNFPSVCLLGPEGTPIAWSLMDQTGEMRMAGTKLEYRAQG 892
            NQ W  GGNE+ +R+I + I  FPSVC+   +G P++WS  DQ   M    T  E+R +G
Sbjct: 166  NQTWSRGGNEQCRRYIAKLISCFPSVCVRDDKGNPVSWSFTDQFATMCHGYTLTEHRRKG 225

Query: 893  LVTYVIFSHSQVLTKLGFPSYSHVDERNKIMQKMSHTLNHLRMPC 1027
                V  +  + L   G P   +  + N+   ++  +L+   +PC
Sbjct: 226  YNRLVALTLVRKLQSQGLPCQGNFWDDNEASIRLLKSLHAELLPC 270


  Database: RefSeq49_SP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 11,343,932
  Number of sequences in database:  24,897
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 24897
Number of Hits to DB: 32,238,717
Number of extensions: 880656
Number of successful extensions: 2575
Number of sequences better than 1.0e-05: 6
Number of HSP's gapped: 2573
Number of HSP's successfully gapped: 6
Length of query: 429
Length of database: 11,343,932
Length adjustment: 102
Effective length of query: 327
Effective length of database: 8,804,438
Effective search space: 2879051226
Effective search space used: 2879051226
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)

Search to RefSeqMP_Rel49

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-012835
         (1287 letters)

Database: RefSeq49_MP.fasta 
           30,036 sequences; 15,617,559 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_666047.1| glycine N-acyltransferase [Mus musculus].            420   e-117
Alignment   gi|NP_001161379.1| glycine N-acyltransferase-like protein [Mus ...   400   e-111
Alignment   gi|NP_001013784.2| glycine N-acyltransferase-like protein [Mus ...   400   e-111
Alignment   gi|NP_083826.1| glycine N-acyltransferase-like protein Keg1 [Mu...   377   e-105
Alignment   gi|NP_001138532.1| glycine N-acyltransferase-like protein 3 [Mu...   145   5e-35

>ref|NP_666047.1| glycine N-acyltransferase [Mus musculus].
          Length = 296

 Score =  420 bits (1080), Expect = e-117
 Identities = 199/292 (68%), Positives = 234/292 (80%)
 Frame = +2

Query: 182  LQGAQMLQMLENSLRKSLPTSLKVYGTVFHMNQGNPFKLKALVDKWPDFNTVVIRPQEQE 361
            LQGAQMLQMLE SLRK LP SLKVYGTV+HM  GNPF LKALVDKWPDFNTVV+RPQEQE
Sbjct: 5    LQGAQMLQMLEKSLRKYLPESLKVYGTVYHMIHGNPFNLKALVDKWPDFNTVVVRPQEQE 64

Query: 362  MTDDLDHYTNTYHIYSKDLKNCEEFLGLPEVINWKXXXXXXXXXXXXNEVIQKLAATKSF 541
            MTDDLD Y NTY +YSKD +NC+EFL   EVINWK            N+ IQ LA+ +SF
Sbjct: 65   MTDDLDFYINTYQVYSKDPQNCQEFLESSEVINWKQHLQIQSSQSHLNKTIQNLASIQSF 124

Query: 542  NVQQTENILYMTLETIKELAPSLLDEKNLSLTDGKPKAIDQEQFQLSSLEPSHAALVNQL 721
             ++ +ENILY++ ETIK+L PSLLD KNLS   GKPKAIDQ++F+LSSL+  HAALVN+ 
Sbjct: 125  QIKHSENILYVSSETIKKLFPSLLDTKNLSTGSGKPKAIDQDKFKLSSLDVVHAALVNKF 184

Query: 722  WQFGGNERSQRFIERCIRNFPSVCLLGPEGTPIAWSLMDQTGEMRMAGTKLEYRAQGLVT 901
            W FGGNERSQRFIERCI+NFPS C+LGPEGTP +W+LMDQTGEMRM GT  EYR QGLV+
Sbjct: 185  WLFGGNERSQRFIERCIKNFPSSCVLGPEGTPASWTLMDQTGEMRMGGTMPEYRLQGLVS 244

Query: 902  YVIFSHSQVLTKLGFPSYSHVDERNKIMQKMSHTLNHLRMPCSWNQWNCVPL 1057
            +V+ S  Q++TK G+P YSH ++ N  MQKMS+TL HL MPC+WNQW C+P+
Sbjct: 245  FVVHSQDQIMTKRGYPVYSHTEKSNIAMQKMSYTLQHLPMPCAWNQWKCMPM 296


>ref|NP_001161379.1| glycine N-acyltransferase-like protein [Mus musculus].
          Length = 296

 Score =  400 bits (1028), Expect = e-111
 Identities = 190/296 (64%), Positives = 234/296 (79%), Gaps = 1/296 (0%)
 Frame = +2

Query: 173  MFLLQGAQMLQMLENSLRKSLPTSLKVYGTVFHMNQGNPFKLKALVDKWPDFNTVVIRPQ 352
            M  L+ +QMLQMLE+SLRK LP SLKVYGTVFHMNQGNPFKLKALVDKWPDFNTVV+RP+
Sbjct: 1    MLHLRSSQMLQMLESSLRKYLPESLKVYGTVFHMNQGNPFKLKALVDKWPDFNTVVVRPR 60

Query: 353  EQEMTDDLDHYTNTYHIYSKDLKNCEEFLGLPEVINWKXXXXXXXXXXXXNEVIQKLAAT 532
            EQEM DDLD +TNTY IYSKD K+C EFLG P+VINWK            NE I  LAA 
Sbjct: 61   EQEMGDDLDQHTNTYQIYSKDPKHCLEFLGTPDVINWKQHLQIQSSQSNLNEAIMDLAAG 120

Query: 533  KSFNVQQTENILYMTLETIKELAPSLLDEKN-LSLTDGKPKAIDQEQFQLSSLEPSHAAL 709
            K   V++T+ ILYM  ET K+L PSLL++K  L    G+P+AIDQE F+LS+L+ +HA L
Sbjct: 121  KMVKVKRTQCILYMMPETAKKLVPSLLEDKEYLDHQSGRPRAIDQEMFKLSTLDVTHAPL 180

Query: 710  VNQLWQFGGNERSQRFIERCIRNFPSVCLLGPEGTPIAWSLMDQTGEMRMAGTKLEYRAQ 889
            V++ WQFGGNERSQRFI RCI+ FPS CLLGPEGTP++W+LMDQTGE+RMAGT  +YRAQ
Sbjct: 181  VDKFWQFGGNERSQRFIGRCIQIFPSSCLLGPEGTPVSWALMDQTGEIRMAGTVPDYRAQ 240

Query: 890  GLVTYVIFSHSQVLTKLGFPSYSHVDERNKIMQKMSHTLNHLRMPCSWNQWNCVPL 1057
            GL++++I++ +  + K G+P Y+H ++ NK++QKMSHTL+H+ MPC WNQW C PL
Sbjct: 241  GLISHIIYAQTLAMDKRGYPVYNHTEQTNKVIQKMSHTLHHVPMPCDWNQWYCAPL 296


>ref|NP_001013784.2| glycine N-acyltransferase-like protein [Mus musculus].
          Length = 296

 Score =  400 bits (1028), Expect = e-111
 Identities = 190/296 (64%), Positives = 234/296 (79%), Gaps = 1/296 (0%)
 Frame = +2

Query: 173  MFLLQGAQMLQMLENSLRKSLPTSLKVYGTVFHMNQGNPFKLKALVDKWPDFNTVVIRPQ 352
            M  L+ +QMLQMLE+SLRK LP SLKVYGTVFHMNQGNPFKLKALVDKWPDFNTVV+RP+
Sbjct: 1    MLHLRSSQMLQMLESSLRKYLPESLKVYGTVFHMNQGNPFKLKALVDKWPDFNTVVVRPR 60

Query: 353  EQEMTDDLDHYTNTYHIYSKDLKNCEEFLGLPEVINWKXXXXXXXXXXXXNEVIQKLAAT 532
            EQEM DDLD +TNTY IYSKD K+C EFLG P+VINWK            NE I  LAA 
Sbjct: 61   EQEMGDDLDQHTNTYQIYSKDPKHCLEFLGTPDVINWKQHLQIQSSQSNLNEAIMDLAAG 120

Query: 533  KSFNVQQTENILYMTLETIKELAPSLLDEKN-LSLTDGKPKAIDQEQFQLSSLEPSHAAL 709
            K   V++T+ ILYM  ET K+L PSLL++K  L    G+P+AIDQE F+LS+L+ +HA L
Sbjct: 121  KMVKVKRTQCILYMMPETAKKLVPSLLEDKEYLDHQSGRPRAIDQEMFKLSTLDVTHAPL 180

Query: 710  VNQLWQFGGNERSQRFIERCIRNFPSVCLLGPEGTPIAWSLMDQTGEMRMAGTKLEYRAQ 889
            V++ WQFGGNERSQRFI RCI+ FPS CLLGPEGTP++W+LMDQTGE+RMAGT  +YRAQ
Sbjct: 181  VDKFWQFGGNERSQRFIGRCIQIFPSSCLLGPEGTPVSWALMDQTGEIRMAGTVPDYRAQ 240

Query: 890  GLVTYVIFSHSQVLTKLGFPSYSHVDERNKIMQKMSHTLNHLRMPCSWNQWNCVPL 1057
            GL++++I++ +  + K G+P Y+H ++ NK++QKMSHTL+H+ MPC WNQW C PL
Sbjct: 241  GLISHIIYAQTLAMDKRGYPVYNHTEQTNKVIQKMSHTLHHVPMPCDWNQWYCAPL 296


>ref|NP_083826.1| glycine N-acyltransferase-like protein Keg1 [Mus musculus].
          Length = 295

 Score =  377 bits (969), Expect = e-105
 Identities = 178/295 (60%), Positives = 219/295 (74%)
 Frame = +2

Query: 173  MFLLQGAQMLQMLENSLRKSLPTSLKVYGTVFHMNQGNPFKLKALVDKWPDFNTVVIRPQ 352
            MF LQ +Q LQ+LENSLRK LP SLKVYGTVFH+NQGNPFKLK LVDKWPDFNTVVIRPQ
Sbjct: 1    MFCLQSSQALQVLENSLRKHLPESLKVYGTVFHINQGNPFKLKTLVDKWPDFNTVVIRPQ 60

Query: 353  EQEMTDDLDHYTNTYHIYSKDLKNCEEFLGLPEVINWKXXXXXXXXXXXXNEVIQKLAAT 532
            E++MTDDLDHY NTY +YSKD K+C+EFLG  EVINWK             +VI+ L AT
Sbjct: 61   EEDMTDDLDHYNNTYLVYSKDPKHCQEFLGSSEVINWKQHLQIQSSQSDLGKVIESLGAT 120

Query: 533  KSFNVQQTENILYMTLETIKELAPSLLDEKNLSLTDGKPKAIDQEQFQLSSLEPSHAALV 712
                V+  +  LYM  +T K+LAPSL+D KNL ++  K   +DQ+ F+ +SL+ +HAALV
Sbjct: 121  NLGKVKHKQCFLYMVCQTAKKLAPSLMDAKNLVVSRNKLTPLDQQLFKFASLDVTHAALV 180

Query: 713  NQLWQFGGNERSQRFIERCIRNFPSVCLLGPEGTPIAWSLMDQTGEMRMAGTKLEYRAQG 892
            N LW FGGNE+SQ+FIERCI  FPS C++GPEGTP++W+LMD TGE+RM GT  +YR Q 
Sbjct: 181  NSLWHFGGNEKSQKFIERCIFTFPSFCIMGPEGTPVSWTLMDHTGELRMGGTLPKYRRQS 240

Query: 893  LVTYVIFSHSQVLTKLGFPSYSHVDERNKIMQKMSHTLNHLRMPCSWNQWNCVPL 1057
            L+ +V     Q L KLGFP Y+HVD+ N  +Q+M   L  + +PC+WNQWNCVPL
Sbjct: 241  LIYHVASQQIQTLEKLGFPMYAHVDKANFTVQRMVGLLGQILLPCTWNQWNCVPL 295


>ref|NP_001138532.1| glycine N-acyltransferase-like protein 3 [Mus musculus].
          Length = 290

 Score =  145 bits (367), Expect = 5e-35
 Identities = 88/306 (28%), Positives = 153/306 (50%), Gaps = 12/306 (3%)
 Frame = +2

Query: 173  MFLLQGAQMLQMLENSLRKSLPTSLKVYGTVFHMNQGNPFKLKALVDKWPDFNTVVIRPQ 352
            M +L+ +  L +LEN L+   P SLKVYG V ++N+GNPF+ + ++D WP+F  ++ R +
Sbjct: 1    MLVLKCSTKLFILENMLKSHFPESLKVYGAVMNINRGNPFQKEVVLDSWPNFKVIITRRE 60

Query: 353  EQEMTDDLDHYTNTYHIYSKDLKNCEEFLGLPEVINWKXXXXXXXXXXXXNEVIQKLAAT 532
             +  TD+LDHYTN Y ++ KD++  ++ L   +VINW                       
Sbjct: 61   REAETDNLDHYTNAYAVFYKDIRAYQQLLEEHDVINW----------------------D 98

Query: 533  KSFNVQQTENILYMTLETIKELAPSLLDEKNLSLTDGKP------KAIDQEQF------Q 676
            + F +Q  ++ LY      K +A + L + +++L   K        ++    F      +
Sbjct: 99   QVFQIQGLQSELY---AASKAVAKARLLDLDINLASFKAVHFSPVSSVPDHSFLTGPTPR 155

Query: 677  LSSLEPSHAALVNQLWQFGGNERSQRFIERCIRNFPSVCLLGPEGTPIAWSLMDQTGEMR 856
            L+ L  S A L+N+ W  GGN++  R++   I  FPSVC+   +G P++W + DQ   M 
Sbjct: 156  LTYLSVSDADLLNRTWSRGGNQQCLRYLANLIACFPSVCVRDEKGNPVSWGITDQFATMC 215

Query: 857  MAGTKLEYRAQGLVTYVIFSHSQVLTKLGFPSYSHVDERNKIMQKMSHTLNHLRMPCSWN 1036
               T  ++R +G    V  + ++ L   GFPS  +V + N     +  ++    +PC ++
Sbjct: 216  HGYTLPDHRRKGYSRLVALTLARKLQSRGFPSQGNVLDDNLASINLLKSVQAEFLPCRFH 275

Query: 1037 QWNCVP 1054
            +    P
Sbjct: 276  RLILTP 281


  Database: RefSeq49_MP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 15,617,559
  Number of sequences in database:  30,036
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 30036
Number of Hits to DB: 43,605,781
Number of extensions: 1174266
Number of successful extensions: 3532
Number of sequences better than 1.0e-05: 5
Number of HSP's gapped: 3527
Number of HSP's successfully gapped: 6
Length of query: 429
Length of database: 15,617,559
Length adjustment: 104
Effective length of query: 325
Effective length of database: 12,493,815
Effective search space: 4060489875
Effective search space used: 4060489875
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)

Search to RefSeqHP_Rel49

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-012835
         (1287 letters)

Database: RefSeq49_HP.fasta 
           32,964 sequences; 18,297,164 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_964011.2| glycine N-acyltransferase isoform a [Homo sapie...   436   e-122
Alignment   gi|NP_005829.3| glycine N-acyltransferase isoform b [Homo sapie...   228   7e-60
Alignment   gi|NP_659453.3| glycine N-acyltransferase-like protein 2 [Homo ...   224   2e-58
Alignment   gi|NP_001207425.1| glycine N-acyltransferase-like protein 1 iso...   215   6e-56
Alignment   gi|NP_001207423.1| glycine N-acyltransferase-like protein 1 iso...   215   6e-56
Alignment   gi|NP_542392.2| glycine N-acyltransferase-like protein 1 isofor...   199   4e-51
Alignment   gi|NP_001010904.1| glycine N-acyltransferase-like protein 3 [Ho...   155   1e-37

>ref|NP_964011.2| glycine N-acyltransferase isoform a [Homo sapiens].
          Length = 296

 Score =  436 bits (1120), Expect = e-122
 Identities = 211/295 (71%), Positives = 235/295 (79%)
 Frame = +2

Query: 173  MFLLQGAQMLQMLENSLRKSLPTSLKVYGTVFHMNQGNPFKLKALVDKWPDFNTVVIRPQ 352
            M  LQGAQMLQMLE SLRKSLP SLKVYGTVFH+N GNPF LKA+VDKWPDFNTVV+ PQ
Sbjct: 2    MLPLQGAQMLQMLEKSLRKSLPASLKVYGTVFHINHGNPFNLKAVVDKWPDFNTVVVCPQ 61

Query: 353  EQEMTDDLDHYTNTYHIYSKDLKNCEEFLGLPEVINWKXXXXXXXXXXXXNEVIQKLAAT 532
            EQ+MTDDLDHYTNTY IYSKD +NC+EFLG PE+INWK            NE IQ LAA 
Sbjct: 62   EQDMTDDLDHYTNTYQIYSKDPQNCQEFLGSPELINWKQHLQIQSSQPSLNEAIQNLAAI 121

Query: 533  KSFNVQQTENILYMTLETIKELAPSLLDEKNLSLTDGKPKAIDQEQFQLSSLEPSHAALV 712
            KSF V+QT+ ILYM  ET KEL P LL  K LS   GKPKAI+QE F+LSS++ +HA LV
Sbjct: 122  KSFKVKQTQRILYMAAETAKELTPFLLKSKILSPNGGKPKAINQEMFKLSSMDVTHAHLV 181

Query: 713  NQLWQFGGNERSQRFIERCIRNFPSVCLLGPEGTPIAWSLMDQTGEMRMAGTKLEYRAQG 892
            N+ W FGGNERSQRFIERCI+ FP+ CLLGPEGTP+ W LMDQTGEMRMAGT  EYR  G
Sbjct: 182  NKFWHFGGNERSQRFIERCIQTFPTCCLLGPEGTPVCWDLMDQTGEMRMAGTLPEYRLHG 241

Query: 893  LVTYVIFSHSQVLTKLGFPSYSHVDERNKIMQKMSHTLNHLRMPCSWNQWNCVPL 1057
            LVTYVI+SH+Q L KLGFP YSHVD  N+ MQKMS+TL H+ +P SWNQWNCVPL
Sbjct: 242  LVTYVIYSHAQKLGKLGFPVYSHVDYSNEAMQKMSYTLQHVPIPRSWNQWNCVPL 296


>ref|NP_005829.3| glycine N-acyltransferase isoform b [Homo sapiens].
          Length = 163

 Score =  228 bits (582), Expect = 7e-60
 Identities = 114/162 (70%), Positives = 124/162 (76%)
 Frame = +2

Query: 173 MFLLQGAQMLQMLENSLRKSLPTSLKVYGTVFHMNQGNPFKLKALVDKWPDFNTVVIRPQ 352
           M  LQGAQMLQMLE SLRKSLP SLKVYGTVFH+N GNPF LKA+VDKWPDFNTVV+ PQ
Sbjct: 2   MLPLQGAQMLQMLEKSLRKSLPASLKVYGTVFHINHGNPFNLKAVVDKWPDFNTVVVCPQ 61

Query: 353 EQEMTDDLDHYTNTYHIYSKDLKNCEEFLGLPEVINWKXXXXXXXXXXXXNEVIQKLAAT 532
           EQ+MTDDLDHYTNTY IYSKD +NC+EFLG PE+INWK            NE IQ LAA 
Sbjct: 62  EQDMTDDLDHYTNTYQIYSKDPQNCQEFLGSPELINWKQHLQIQSSQPSLNEAIQNLAAI 121

Query: 533 KSFNVQQTENILYMTLETIKELAPSLLDEKNLSLTDGKPKAI 658
           KSF V+QT+ ILYM  ET KEL P LL  K LS   GKPKA+
Sbjct: 122 KSFKVKQTQRILYMAAETAKELTPFLLKSKILSPNGGKPKAM 163


>ref|NP_659453.3| glycine N-acyltransferase-like protein 2 [Homo sapiens].
          Length = 294

 Score =  224 bits (570), Expect = 2e-58
 Identities = 117/294 (39%), Positives = 170/294 (57%)
 Frame = +2

Query: 173  MFLLQGAQMLQMLENSLRKSLPTSLKVYGTVFHMNQGNPFKLKALVDKWPDFNTVVIRPQ 352
            M +L  +Q LQ+L  SL KS+P S+KVYG +F++   NPF ++ LVD WPD+  V+ RPQ
Sbjct: 1    MLVLHNSQKLQILYKSLEKSIPESIKVYGAIFNIKDKNPFNMEVLVDAWPDYQIVITRPQ 60

Query: 353  EQEMTDDLDHYTNTYHIYSKDLKNCEEFLGLPEVINWKXXXXXXXXXXXXNEVIQKLAAT 532
            +QEM DD DHYTNTYHI++K     EE L    VI+W+            +E I+K+A +
Sbjct: 61   KQEMKDDQDHYTNTYHIFTKAPDKLEEVLSYSNVISWEQTLQIQGCQEGLDEAIRKVATS 120

Query: 533  KSFNVQQTENILYMTLETIKELAPSLLDEKNLSLTDGKPKAIDQEQFQLSSLEPSHAALV 712
            KS  V   + IL++  E  K+   S  D+  L   D   K   +  F    L+ SHA LV
Sbjct: 121  KSVQVDYMKTILFIP-ELPKKHKTSSNDKMELFEVDDDNK---EGNFSNMFLDASHAGLV 176

Query: 713  NQLWQFGGNERSQRFIERCIRNFPSVCLLGPEGTPIAWSLMDQTGEMRMAGTKLEYRAQG 892
            N+ W FG NERS ++IERC+++F    +LGPEG  ++W +M+Q+ E+RM  T  +YR QG
Sbjct: 177  NEHWAFGKNERSLKYIERCLQDFLGFGVLGPEGQLVSWIVMEQSCELRMGYTVPKYRHQG 236

Query: 893  LVTYVIFSHSQVLTKLGFPSYSHVDERNKIMQKMSHTLNHLRMPCSWNQWNCVP 1054
             +  + +   + L++   P Y HV + N+   +  + L     PC W+QW C P
Sbjct: 237  NMLQIGYHLEKYLSQKEIPFYFHVADNNEKSLQALNNLGFKICPCGWHQWKCTP 290


>ref|NP_001207425.1| glycine N-acyltransferase-like protein 1 isoform 2 [Homo sapiens].
          Length = 302

 Score =  215 bits (548), Expect = 6e-56
 Identities = 110/296 (37%), Positives = 166/296 (56%), Gaps = 2/296 (0%)
 Frame = +2

Query: 173  MFLLQGAQMLQMLENSLRKSLPTSLKVYGTVFHMNQGNPFKLKALVDKWPDFNTVVIRPQ 352
            M LL  +  L  L  SL +S+P SLKVYG+V+H+N GNPF ++ LVD WP++  V+IRPQ
Sbjct: 1    MILLNNSHKLLALYKSLARSIPESLKVYGSVYHINHGNPFNMEVLVDSWPEYQMVIIRPQ 60

Query: 353  EQEMTDDLDHYTNTYHIYSKDLKNCEEFLGLPEVINWKXXXXXXXXXXXXNEVIQKLAAT 532
            +QEMTDD+D YTN Y ++SK+ +  EE L   E++NWK             E I+    +
Sbjct: 61   KQEMTDDMDSYTNVYRMFSKEPQKSEEVLKNCEIVNWKQRLQIQGLQESLGEGIRVATFS 120

Query: 533  KSFNVQQTENILYMTLETIKELAPSLLDEKNLSLTDGKPKAIDQE--QFQLSSLEPSHAA 706
            KS  V+ +  +L +T + +K  A S     + + T       + E   F+ + L+ S++ 
Sbjct: 121  KSVKVEHSRALLLVTEDILKLNASSKSKLGSWAETGHPDDEFESETPNFKYAQLDVSYSG 180

Query: 707  LVNQLWQFGGNERSQRFIERCIRNFPSVCLLGPEGTPIAWSLMDQTGEMRMAGTKLEYRA 886
            LVN  W+ G NERS  +I+RCI + P+ C+LGPEG P++W  MD + E+ MA +  +YR 
Sbjct: 181  LVNDNWKRGKNERSLHYIKRCIEDLPAACMLGPEGVPVSWVTMDPSCEVGMAYSMEKYRR 240

Query: 887  QGLVTYVIFSHSQVLTKLGFPSYSHVDERNKIMQKMSHTLNHLRMPCSWNQWNCVP 1054
             G +  V+  + + L +   P Y  V E N+  ++           C W+QW C P
Sbjct: 241  TGNMARVMVRYMKYLRQKNIPFYISVLEENEDSRRFVGQFGFFEASCEWHQWTCYP 296


>ref|NP_001207423.1| glycine N-acyltransferase-like protein 1 isoform 2 [Homo sapiens].
          Length = 302

 Score =  215 bits (548), Expect = 6e-56
 Identities = 110/296 (37%), Positives = 166/296 (56%), Gaps = 2/296 (0%)
 Frame = +2

Query: 173  MFLLQGAQMLQMLENSLRKSLPTSLKVYGTVFHMNQGNPFKLKALVDKWPDFNTVVIRPQ 352
            M LL  +  L  L  SL +S+P SLKVYG+V+H+N GNPF ++ LVD WP++  V+IRPQ
Sbjct: 1    MILLNNSHKLLALYKSLARSIPESLKVYGSVYHINHGNPFNMEVLVDSWPEYQMVIIRPQ 60

Query: 353  EQEMTDDLDHYTNTYHIYSKDLKNCEEFLGLPEVINWKXXXXXXXXXXXXNEVIQKLAAT 532
            +QEMTDD+D YTN Y ++SK+ +  EE L   E++NWK             E I+    +
Sbjct: 61   KQEMTDDMDSYTNVYRMFSKEPQKSEEVLKNCEIVNWKQRLQIQGLQESLGEGIRVATFS 120

Query: 533  KSFNVQQTENILYMTLETIKELAPSLLDEKNLSLTDGKPKAIDQE--QFQLSSLEPSHAA 706
            KS  V+ +  +L +T + +K  A S     + + T       + E   F+ + L+ S++ 
Sbjct: 121  KSVKVEHSRALLLVTEDILKLNASSKSKLGSWAETGHPDDEFESETPNFKYAQLDVSYSG 180

Query: 707  LVNQLWQFGGNERSQRFIERCIRNFPSVCLLGPEGTPIAWSLMDQTGEMRMAGTKLEYRA 886
            LVN  W+ G NERS  +I+RCI + P+ C+LGPEG P++W  MD + E+ MA +  +YR 
Sbjct: 181  LVNDNWKRGKNERSLHYIKRCIEDLPAACMLGPEGVPVSWVTMDPSCEVGMAYSMEKYRR 240

Query: 887  QGLVTYVIFSHSQVLTKLGFPSYSHVDERNKIMQKMSHTLNHLRMPCSWNQWNCVP 1054
             G +  V+  + + L +   P Y  V E N+  ++           C W+QW C P
Sbjct: 241  TGNMARVMVRYMKYLRQKNIPFYISVLEENEDSRRFVGQFGFFEASCEWHQWTCYP 296


>ref|NP_542392.2| glycine N-acyltransferase-like protein 1 isoform 1 [Homo sapiens].
          Length = 333

 Score =  199 bits (507), Expect = 4e-51
 Identities = 100/272 (36%), Positives = 153/272 (56%), Gaps = 2/272 (0%)
 Frame = +2

Query: 245  LKVYGTVFHMNQGNPFKLKALVDKWPDFNTVVIRPQEQEMTDDLDHYTNTYHIYSKDLKN 424
            LKVYG+V+H+N GNPF ++ LVD WP++  V+IRPQ+QEMTDD+D YTN Y ++SK+ + 
Sbjct: 56   LKVYGSVYHINHGNPFNMEVLVDSWPEYQMVIIRPQKQEMTDDMDSYTNVYRMFSKEPQK 115

Query: 425  CEEFLGLPEVINWKXXXXXXXXXXXXNEVIQKLAATKSFNVQQTENILYMTLETIKELAP 604
             EE L   E++NWK             E I+    +KS  V+ +  +L +T + +K  A 
Sbjct: 116  SEEVLKNCEIVNWKQRLQIQGLQESLGEGIRVATFSKSVKVEHSRALLLVTEDILKLNAS 175

Query: 605  SLLDEKNLSLTDGKPKAIDQE--QFQLSSLEPSHAALVNQLWQFGGNERSQRFIERCIRN 778
            S     + + T       + E   F+ + L+ S++ LVN  W+ G NERS  +I+RCI +
Sbjct: 176  SKSKLGSWAETGHPDDEFESETPNFKYAQLDVSYSGLVNDNWKRGKNERSLHYIKRCIED 235

Query: 779  FPSVCLLGPEGTPIAWSLMDQTGEMRMAGTKLEYRAQGLVTYVIFSHSQVLTKLGFPSYS 958
             P+ C+LGPEG P++W  MD + E+ MA +  +YR  G +  V+  + + L +   P Y 
Sbjct: 236  LPAACMLGPEGVPVSWVTMDPSCEVGMAYSMEKYRRTGNMARVMVRYMKYLRQKNIPFYI 295

Query: 959  HVDERNKIMQKMSHTLNHLRMPCSWNQWNCVP 1054
             V E N+  ++           C W+QW C P
Sbjct: 296  SVLEENEDSRRFVGQFGFFEASCEWHQWTCYP 327


>ref|NP_001010904.1| glycine N-acyltransferase-like protein 3 [Homo sapiens].
          Length = 288

 Score =  155 bits (391), Expect = 1e-37
 Identities = 92/294 (31%), Positives = 150/294 (51%)
 Frame = +2

Query: 173  MFLLQGAQMLQMLENSLRKSLPTSLKVYGTVFHMNQGNPFKLKALVDKWPDFNTVVIRPQ 352
            M +L  +  L +LE  L+   P SLKVYG V ++N+GNPF+ + ++D WPDF  V+ R Q
Sbjct: 1    MLVLNCSTKLLILEKMLKSCFPESLKVYGAVMNINRGNPFQKEVVLDSWPDFKAVITRRQ 60

Query: 353  EQEMTDDLDHYTNTYHIYSKDLKNCEEFLGLPEVINWKXXXXXXXXXXXXNEVIQKLAAT 532
             +  TD+LDHYTN Y ++ KD++   + L   +V NW              +V + +A +
Sbjct: 61   REAETDNLDHYTNAYAVFYKDVRAYRQLLEECDVFNWDQVFQIQGLQSELYDVSKAVANS 120

Query: 533  KSFNVQQTENILYMTLETIKELAPSLLDEKNLSLTDGKPKAIDQEQFQLSSLEPSHAALV 712
            K  N++ T      + + +     S L + +  L    P+        L+ L  ++A L+
Sbjct: 121  KQLNIKLT------SFKAVHFSPVSSLPDTSF-LKGPSPR--------LTYLSVANADLL 165

Query: 713  NQLWQFGGNERSQRFIERCIRNFPSVCLLGPEGTPIAWSLMDQTGEMRMAGTKLEYRAQG 892
            N+ W  GGNE+  R+I   I  FPSVC+   +G P++WS+ DQ   M    T  E+R +G
Sbjct: 166  NRTWSRGGNEQCLRYIANLISCFPSVCVRDEKGNPVSWSITDQFATMCHGYTLPEHRRKG 225

Query: 893  LVTYVIFSHSQVLTKLGFPSYSHVDERNKIMQKMSHTLNHLRMPCSWNQWNCVP 1054
                V  + ++ L   GFPS  +V + N     +  +L+   +PC +++    P
Sbjct: 226  YSRLVALTLARKLQSRGFPSQGNVLDDNTASISLLKSLHAEFLPCRFHRLILTP 279


  Database: RefSeq49_HP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 18,297,164
  Number of sequences in database:  32,964
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 32964
Number of Hits to DB: 51,358,254
Number of extensions: 1393053
Number of successful extensions: 4157
Number of sequences better than 1.0e-05: 7
Number of HSP's gapped: 4147
Number of HSP's successfully gapped: 7
Length of query: 429
Length of database: 18,297,164
Length adjustment: 105
Effective length of query: 324
Effective length of database: 14,835,944
Effective search space: 4806845856
Effective search space used: 4806845856
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)

Search to Sscrofa10_2

BLASTN 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-012835
         (1287 letters)

Database: Sscrofa_10.2.fasta 
           4582 sequences; 2,808,509,378 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Sscrofa_Chr02                                                        1201   0.0  

>Sscrofa_Chr02 
||          Length = 162569375

 Score = 1201 bits (606), Expect = 0.0
 Identities = 624/630 (99%)
 Strand = Plus / Minus

                                                                            
Query: 658      tgaccaagagcagtttcaactctcatccctggaaccttcccacgctgccttggtgaatca 717
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11997433 tgaccaagagcagtttcaactctcatccctggaaccttcccacgctgccttggtgaatca 11997374

                                                                            
Query: 718      attatggcaattcggtggcaatgagaggagccagagattcatcgagcgctgcatccggaa 777
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11997373 attatggcaattcggtggcaatgagaggagccagagattcatcgagcgctgcatccggaa 11997314

                                                                            
Query: 778      cttcccctccgtctgcctgctagggcctgaggggaccccgatagcttggtccctgatgga 837
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11997313 cttcccctccgtctgcctgctagggcctgaggggaccccgatagcttggtccctgatgga 11997254

                                                                            
Query: 838      ccagacaggagagatgcggatggcaggcaccaaacttgagtaccgggcccagggcctcgt 897
                ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 11997253 ccagacaggagagatgcggatggcaggcaccaagcttgagtaccgggcccagggcctcgt 11997194

                                                                            
Query: 898      cacctacgtcatcttttcccattcccaggttctgaccaaactcggtttcccctcctattc 957
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11997193 cacctacgtcatcttttcccattcccaggttctgaccaaactcggtttcccctcctattc 11997134

                                                                            
Query: 958      tcacgtagacgagagaaacaaaattatgcagaagatgagtcacactctgaatcaccttcg 1017
                |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11997133 tcacgtagacaagagaaacaaaattatgcagaagatgagtcacactctgaatcaccttcg 11997074

                                                                            
Query: 1018     catgccctgtagctggaatcagtggaactgtgtgcctctgtgaagcagccctgaacccag 1077
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 11997073 catgccctgtagctggaatcagtggaactgtgtgcctctgtgaagcagccctgaacccaa 11997014

                                                                            
Query: 1078     gacagtggggatgggcctgaggctgtgggtagacagagggggagcctaaactgtcattgt 1137
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11997013 gacagtggggatgggcctgaggctgtgggtagacagagggggagcctaaactgtcattgt 11996954

                                                                            
Query: 1138     aatcatcaataaagtagtggatgctgtccgtataaaaggtatagcaatatgcctatccgg 1197
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11996953 aatcatcaataaagtagtggatgctgtccgtataaaaggtatagcaatatgcctatccgg 11996894

                                                                            
Query: 1198     gacctggtcatttagaaacaatgaaaccacccttttagaaacgaataaaactggacttcc 1257
                |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 11996893 gacctggtcatttagaaacaatgaaaccacccttttagaaacgaatgaaactggacttcc 11996834

                                              
Query: 1258     tgttgtggctcattaggttcagagcccaaa 1287
                |||||||||||| |||||||||| ||||||
Sbjct: 11996833 tgttgtggctcagtaggttcagaacccaaa 11996804



 Score = 1193 bits (602), Expect = 0.0
 Identities = 623/630 (98%)
 Strand = Plus / Plus

                                                                            
Query: 658      tgaccaagagcagtttcaactctcatccctggaaccttcccacgctgccttggtgaatca 717
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11993062 tgaccaagagcagtttcaactctcatccctggaaccttcccacgctgccttggtgaatca 11993121

                                                                            
Query: 718      attatggcaattcggtggcaatgagaggagccagagattcatcgagcgctgcatccggaa 777
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11993122 attatggcaattcggtggcaatgagaggagccagagattcatcgagcgctgcatccggaa 11993181

                                                                            
Query: 778      cttcccctccgtctgcctgctagggcctgaggggaccccgatagcttggtccctgatgga 837
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11993182 cttcccctccgtctgcctgctagggcctgaggggaccccgatagcttggtccctgatgga 11993241

                                                                            
Query: 838      ccagacaggagagatgcggatggcaggcaccaaacttgagtaccgggcccagggcctcgt 897
                ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 11993242 ccagacaggagagatgcggatggcaggcaccaagcttgagtaccgggcccagggcctcgt 11993301

                                                                            
Query: 898      cacctacgtcatcttttcccattcccaggttctgaccaaactcggtttcccctcctattc 957
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11993302 cacctacgtcatcttttcccattcccaggttctgaccaaactcggtttcccctcctattc 11993361

                                                                            
Query: 958      tcacgtagacgagagaaacaaaattatgcagaagatgagtcacactctgaatcaccttcg 1017
                |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11993362 tcacgtagacaagagaaacaaaattatgcagaagatgagtcacactctgaatcaccttcg 11993421

                                                                            
Query: 1018     catgccctgtagctggaatcagtggaactgtgtgcctctgtgaagcagccctgaacccag 1077
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 11993422 catgccctgtagctggaatcagtggaactgtgtgcctctgtgaagcagccctgaacccaa 11993481

                                                                            
Query: 1078     gacagtggggatgggcctgaggctgtgggtagacagagggggagcctaaactgtcattgt 1137
                ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 11993482 gacagtggggatgggcctgaggctgtgcgtagacagagggggagcctaaactgtcattgt 11993541

                                                                            
Query: 1138     aatcatcaataaagtagtggatgctgtccgtataaaaggtatagcaatatgcctatccgg 1197
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11993542 aatcatcaataaagtagtggatgctgtccgtataaaaggtatagcaatatgcctatccgg 11993601

                                                                            
Query: 1198     gacctggtcatttagaaacaatgaaaccacccttttagaaacgaataaaactggacttcc 1257
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 11993602 gacctggtcatttagaaacaatgaaaccacccttttagaaacgaataaaactggagttcc 11993661

                                              
Query: 1258     tgttgtggctcattaggttcagagcccaaa 1287
                |||||||||||| |||||||||| ||||||
Sbjct: 11993662 tgttgtggctcagtaggttcagaacccaaa 11993691



 Score =  607 bits (306), Expect = e-171
 Identities = 330/338 (97%)
 Strand = Plus / Minus

                                                                            
Query: 950      tcctattctcacgtagacgagagaaacaaaattatgcagaagatgagtcacactctgaat 1009
                |||||||||| ||||||| ||||| |||||||||||||||||||||||||||||||||||
Sbjct: 11996385 tcctattctctcgtagacaagagagacaaaattatgcagaagatgagtcacactctgaat 11996326

                                                                            
Query: 1010     caccttcgcatgccctgtagctggaatcagtggaactgtgtgcctctgtgaagcagccct 1069
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11996325 caccttcgcatgccctgtagctggaatcagtggaactgtgtgcctctgtgaagcagccct 11996266

                                                                            
Query: 1070     gaacccaggacagtggggatgggcctgaggctgtgggtagacagagggggagcctaaact 1129
                ||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 11996265 gaacccaagacagtggggatgggcctgaggctgtgcgtagacagagggggagcctaaact 11996206

                                                                            
Query: 1130     gtcattgtaatcatcaataaagtagtggatgctgtccgtataaaaggtatagcaatatgc 1189
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11996205 gtcattgtaatcatcaataaagtagtggatgctgtccgtataaaaggtatagcaatatgc 11996146

                                                                            
Query: 1190     ctatccgggacctggtcatttagaaacaatgaaaccacccttttagaaacgaataaaact 1249
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11996145 ctatccgggacctggtcatttagaaacaatgaaaccacccttttagaaacgaataaaact 11996086

                                                      
Query: 1250     ggacttcctgttgtggctcattaggttcagagcccaaa 1287
                ||| |||||||||||||||| |||||||||| ||||||
Sbjct: 11996085 ggagttcctgttgtggctcagtaggttcagaacccaaa 11996048



 Score =  333 bits (168), Expect = 1e-88
 Identities = 171/172 (99%)
 Strand = Plus / Plus

                                                                            
Query: 486      gttctcagtccagcctgaatgaggtaatacaaaagcttgcagccactaaatccttcaacg 545
                |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 11992474 gttctcagtccagcctgaatgaggtaatacaaaagcttgcagccgctaaatccttcaacg 11992533

                                                                            
Query: 546      tccagcagacagaaaacattctctacatgacgcttgagacaataaaggaactggctcctt 605
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11992534 tccagcagacagaaaacattctctacatgacgcttgagacaataaaggaactggctcctt 11992593

                                                                    
Query: 606      ccctgctggatgaaaagaacttgtcccttaccgatggtaaacccaaggccat 657
                ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11992594 ccctgctggatgaaaagaacttgtcccttaccgatggtaaacccaaggccat 11992645



 Score =  333 bits (168), Expect = 1e-88
 Identities = 171/172 (99%)
 Strand = Plus / Minus

                                                                            
Query: 486      gttctcagtccagcctgaatgaggtaatacaaaagcttgcagccactaaatccttcaacg 545
                |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 11998021 gttctcagtccagcctgaatgaggtaatacaaaagcttgcagccgctaaatccttcaacg 11997962

                                                                            
Query: 546      tccagcagacagaaaacattctctacatgacgcttgagacaataaaggaactggctcctt 605
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11997961 tccagcagacagaaaacattctctacatgacgcttgagacaataaaggaactggctcctt 11997902

                                                                    
Query: 606      ccctgctggatgaaaagaacttgtcccttaccgatggtaaacccaaggccat 657
                ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11997901 ccctgctggatgaaaagaacttgtcccttaccgatggtaaacccaaggccat 11997850



 Score =  299 bits (151), Expect = 2e-78
 Identities = 151/151 (100%)
 Strand = Plus / Plus

                                                                            
Query: 1        cattgcaaacctcagcttggcatgaagaaaacagagctcagtgcactctgccagaccctg 60
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12081587 cattgcaaacctcagcttggcatgaagaaaacagagctcagtgcactctgccagaccctg 12081646

                                                                            
Query: 61       ctgaacagactgcaccagagggaaatttccgactcgagaggttgctcctcatcatttgtt 120
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12081647 ctgaacagactgcaccagagggaaatttccgactcgagaggttgctcctcatcatttgtt 12081706

                                               
Query: 121      cccgccaagctttggtgtgaagactgctttc 151
                |||||||||||||||||||||||||||||||
Sbjct: 12081707 cccgccaagctttggtgtgaagactgctttc 12081737



 Score =  262 bits (132), Expect = 4e-67
 Identities = 132/132 (100%)
 Strand = Plus / Plus

                                                                            
Query: 356      caggagatgacagacgaccttgatcactacaccaatacctaccacatctactccaaggac 415
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11990910 caggagatgacagacgaccttgatcactacaccaatacctaccacatctactccaaggac 11990969

                                                                            
Query: 416      ctgaagaactgtgaggaattccttggcttaccagaagtcatcaactggaaacagcatttg 475
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11990970 ctgaagaactgtgaggaattccttggcttaccagaagtcatcaactggaaacagcatttg 11991029

                            
Query: 476      cagatccaaagt 487
                ||||||||||||
Sbjct: 11991030 cagatccaaagt 11991041



 Score =  254 bits (128), Expect = 1e-64
 Identities = 131/132 (99%)
 Strand = Plus / Minus

                                                                            
Query: 356      caggagatgacagacgaccttgatcactacaccaatacctaccacatctactccaaggac 415
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11999649 caggagatgacagacgaccttgatcactacaccaatacctaccacatctactccaaggac 11999590

                                                                            
Query: 416      ctgaagaactgtgaggaattccttggcttaccagaagtcatcaactggaaacagcatttg 475
                ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 11999589 ctgaagaactgtgaggaattccttggcttaccataagtcatcaactggaaacagcatttg 11999530

                            
Query: 476      cagatccaaagt 487
                ||||||||||||
Sbjct: 11999529 cagatccaaagt 11999518



 Score =  212 bits (107), Expect = 4e-52
 Identities = 110/111 (99%)
 Strand = Plus / Plus

                                                                            
Query: 249      aggtttatggcaccgtcttccacatgaaccagggaaaccccttcaagctaaaggccttgg 308
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11988012 aggtttatggcaccgtcttccacatgaaccagggaaaccccttcaagctaaaggccttgg 11988071

                                                                   
Query: 309      tggacaagtggcctgattttaacacagtggttattcgccctcaagagcagg 359
                ||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 11988072 tggacaagtggcctgattttaacacagtggttattcgccctcaggagcagg 11988122



 Score =  212 bits (107), Expect = 4e-52
 Identities = 110/111 (99%)
 Strand = Plus / Minus

                                                                            
Query: 249      aggtttatggcaccgtcttccacatgaaccagggaaaccccttcaagctaaaggccttgg 308
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12002553 aggtttatggcaccgtcttccacatgaaccagggaaaccccttcaagctaaaggccttgg 12002494

                                                                   
Query: 309      tggacaagtggcctgattttaacacagtggttattcgccctcaagagcagg 359
                ||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 12002493 tggacaagtggcctgattttaacacagtggttattcgccctcaggagcagg 12002443



 Score =  196 bits (99), Expect = 2e-47
 Identities = 108/111 (97%)
 Strand = Plus / Plus

                                                                            
Query: 249      aggtttatggcaccgtcttccacatgaaccagggaaaccccttcaagctaaaggccttgg 308
                ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 12021030 aggtttatggcaccgtcttccacatgaaccaaggaaaccccttcaagctaaaggccttgg 12021089

                                                                   
Query: 309      tggacaagtggcctgattttaacacagtggttattcgccctcaagagcagg 359
                |||||||||||||||||||||| |||||||||||||||||||| |||||||
Sbjct: 12021090 tggacaagtggcctgattttaatacagtggttattcgccctcaggagcagg 12021140



 Score =  196 bits (99), Expect = 2e-47
 Identities = 108/111 (97%)
 Strand = Plus / Plus

                                                                            
Query: 249      aggtttatggcaccgtcttccacatgaaccagggaaaccccttcaagctaaaggccttgg 308
                ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 12064723 aggtttatggcaccgtcttccacatgaaccaaggaaaccccttcaagctaaaggccttgg 12064782

                                                                   
Query: 309      tggacaagtggcctgattttaacacagtggttattcgccctcaagagcagg 359
                |||||||||||||||||||||| |||||||||||||||||||| |||||||
Sbjct: 12064783 tggacaagtggcctgattttaatacagtggttattcgccctcaggagcagg 12064833



 Score =  184 bits (93), Expect = 8e-44
 Identities = 174/201 (86%)
 Strand = Plus / Plus

                                                                            
Query: 660      accaagagcagtttcaactctcatccctggaaccttcccacgctgccttggtgaatcaat 719
                ||||||||  ||||||| |||||||| ||||   | |||||||||||||||||||| | |
Sbjct: 12070049 accaagagttgtttcaagtctcatccatggatgttacccacgctgccttggtgaataagt 12070108

                                                                            
Query: 720      tatggcaattcggtggcaatgagaggagccagagattcatcgagcgctgcatccggaact 779
                | ||||| || |||||||| |||||||||||||||||||| ||||| || ||||| ||||
Sbjct: 12070109 tctggcattttggtggcaacgagaggagccagagattcattgagcgatgtatccgcaact 12070168

                                                                            
Query: 780      tcccctccgtctgcctgctagggcctgaggggaccccgatagcttggtccctgatggacc 839
                | | |||| ||||| |||| ||||||||||| ||||| ||| ||||||||||||||||||
Sbjct: 12070169 ttctctccatctgcttgctggggcctgagggcacccctatatcttggtccctgatggacc 12070228

                                     
Query: 840      agacaggagagatgcggatgg 860
                ||||||||||||| |||||||
Sbjct: 12070229 agacaggagagatacggatgg 12070249



 Score =  182 bits (92), Expect = 3e-43
 Identities = 98/100 (98%)
 Strand = Plus / Plus

                                                                            
Query: 153      aggctaagacatctcccacgatgttcctattgcaaggtgcccagatgctgcagatgctgg 212
                |||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 11982288 aggctaaggcatctcccacgatgttcctgttgcaaggtgcccagatgctgcagatgctgg 11982347

                                                        
Query: 213      agaattccttgaggaagagccttcctacatccttgaaggt 252
                ||||||||||||||||||||||||||||||||||||||||
Sbjct: 11982348 agaattccttgaggaagagccttcctacatccttgaaggt 11982387



 Score =  182 bits (92), Expect = 3e-43
 Identities = 98/100 (98%)
 Strand = Plus / Minus

                                                                            
Query: 153      aggctaagacatctcccacgatgttcctattgcaaggtgcccagatgctgcagatgctgg 212
                |||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 12008298 aggctaaggcatctcccacgatgttcctgttgcaaggtgcccagatgctgcagatgctgg 12008239

                                                        
Query: 213      agaattccttgaggaagagccttcctacatccttgaaggt 252
                ||||||||||||||||||||||||||||||||||||||||
Sbjct: 12008238 agaattccttgaggaagagccttcctacatccttgaaggt 12008199



 Score =  182 bits (92), Expect = 3e-43
 Identities = 170/196 (86%)
 Strand = Plus / Plus

                                                                            
Query: 674      caactctcatccctggaaccttcccacgctgccttggtgaatcaattatggcaattcggt 733
                ||||| ||||||||||| |||||||||||||| |||||||||  ||| ||| | || |||
Sbjct: 12030196 caactgtcatccctggatccttcccacgctgctttggtgaatacattctggtattttggt 12030255

                                                                            
Query: 734      ggcaatgagaggagccagagattcatcgagcgctgcatccggaacttcccctccgtctgc 793
                ||||||||||||||||||||||||||||||||||| |||  || |||||||  |   |||
Sbjct: 12030256 ggcaatgagaggagccagagattcatcgagcgctgtatcaagaccttccccaactggtgc 12030315

                                                                            
Query: 794      ctgctagggcctgaggggaccccgatagcttggtccctgatggaccagacaggagagatg 853
                ||||| |||||||||||||||||  |  | |||  |||||||||||||||||||||||||
Sbjct: 12030316 ctgctggggcctgaggggacccccgtgtcctgggtcctgatggaccagacaggagagatg 12030375

                                
Query: 854      cggatggcaggcacca 869
                ||||||||||||||||
Sbjct: 12030376 cggatggcaggcacca 12030391



 Score =  182 bits (92), Expect = 3e-43
 Identities = 170/196 (86%)
 Strand = Plus / Plus

                                                                            
Query: 674      caactctcatccctggaaccttcccacgctgccttggtgaatcaattatggcaattcggt 733
                ||||| ||||||||||| |||||||||||||| |||||||||  ||| ||| | || |||
Sbjct: 12219355 caactgtcatccctggatccttcccacgctgctttggtgaatacattctggtattttggt 12219414

                                                                            
Query: 734      ggcaatgagaggagccagagattcatcgagcgctgcatccggaacttcccctccgtctgc 793
                ||||||||||||||||||||||||||||||||||| |||  || |||||||  |   |||
Sbjct: 12219415 ggcaatgagaggagccagagattcatcgagcgctgtatcaagaccttccccaactggtgc 12219474

                                                                            
Query: 794      ctgctagggcctgaggggaccccgatagcttggtccctgatggaccagacaggagagatg 853
                ||||| |||||||||||||||||  |  | |||  |||||||||||||||||||||||||
Sbjct: 12219475 ctgctggggcctgaggggacccccgtgtcctgggtcctgatggaccagacaggagagatg 12219534

                                
Query: 854      cggatggcaggcacca 869
                ||||||||||||||||
Sbjct: 12219535 cggatggcaggcacca 12219550



 Score =  170 bits (86), Expect = 1e-39
 Identities = 164/190 (86%)
 Strand = Plus / Plus

                                                                            
Query: 660      accaagagcagtttcaactctcatccctggaaccttcccacgctgccttggtgaatcaat 719
                ||||||||  ||||||| |||||||| ||||   | |||||||||||||||||||| | |
Sbjct: 11970518 accaagagatgtttcaagtctcatccatggatgttacccacgctgccttggtgaataagt 11970577

                                                                            
Query: 720      tatggcaattcggtggcaatgagaggagccagagattcatcgagcgctgcatccggaact 779
                | ||||| || |||||||| |||||||||||||||||||| ||||| || ||||| ||||
Sbjct: 11970578 tctggcattttggtggcaacgagaggagccagagattcattgagcgatgtatccgcaact 11970637

                                                                            
Query: 780      tcccctccgtctgcctgctagggcctgaggggaccccgatagcttggtccctgatggacc 839
                | | |||| ||||| |||| ||||||||||| ||||| ||| ||||||||||||||||||
Sbjct: 11970638 ttctctccatctgcttgctggggcctgagggcacccctatatcttggtccctgatggacc 11970697

                          
Query: 840      agacaggaga 849
                ||||||||||
Sbjct: 11970698 agacaggaga 11970707



 Score =  135 bits (68), Expect = 7e-29
 Identities = 116/132 (87%)
 Strand = Plus / Plus

                                                                            
Query: 356      caggagatgacagacgaccttgatcactacaccaatacctaccacatctactccaaggac 415
                |||||||||||||| || || ||||||||||||||||| || ||  ||||||||||||||
Sbjct: 12025709 caggagatgacagatgaactcgatcactacaccaatacttatcaagtctactccaaggac 12025768

                                                                            
Query: 416      ctgaagaactgtgaggaattccttggcttaccagaagtcatcaactggaaacagcatttg 475
                |  ||||| ||| | |||||||||||||| ||||||||||||||||||||||| || |||
Sbjct: 12025769 cctaagaagtgtcaagaattccttggcttgccagaagtcatcaactggaaacaacacttg 12025828

                            
Query: 476      cagatccaaagt 487
                ||||| ||||||
Sbjct: 12025829 cagattcaaagt 12025840



 Score =  135 bits (68), Expect = 7e-29
 Identities = 116/132 (87%)
 Strand = Plus / Plus

                                                                            
Query: 356      caggagatgacagacgaccttgatcactacaccaatacctaccacatctactccaaggac 415
                |||||||||||||| || || ||||||||||||||||| || ||  ||||||||||||||
Sbjct: 12214871 caggagatgacagatgaactcgatcactacaccaatacttatcaagtctactccaaggac 12214930

                                                                            
Query: 416      ctgaagaactgtgaggaattccttggcttaccagaagtcatcaactggaaacagcatttg 475
                |  ||||| ||| | |||||||||||||| ||||||||||||||||||||||| || |||
Sbjct: 12214931 cctaagaagtgtcaagaattccttggcttgccagaagtcatcaactggaaacaacacttg 12214990

                            
Query: 476      cagatccaaagt 487
                ||||| ||||||
Sbjct: 12214991 cagattcaaagt 12215002



 Score =  111 bits (56), Expect = 1e-21
 Identities = 110/128 (85%)
 Strand = Plus / Plus

                                                                            
Query: 356      caggagatgacagacgaccttgatcactacaccaatacctaccacatctactccaaggac 415
                |||||||||||||| ||| |||||||| |||||||||||||||| ||||| || ||||| 
Sbjct: 12066664 caggagatgacagatgactttgatcaccacaccaatacctaccaaatctattctaaggat 12066723

                                                                            
Query: 416      ctgaagaactgtgaggaattccttggcttaccagaagtcatcaactggaaacagcatttg 475
                || ||||||||| | |||  |||| ||  | |||| |||||||||||||| |||||||||
Sbjct: 12066724 ctcaagaactgtcacgaagcccttagcacatcagatgtcatcaactggaagcagcatttg 12066783

                        
Query: 476      cagatcca 483
                ||||||||
Sbjct: 12066784 cagatcca 12066791


  Database: Sscrofa_10.2.fasta
    Posted date:  Nov 16, 2011 10:34 AM
  Number of letters in database: 2,808,509,378
  Number of sequences in database:  4582
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4582
Number of Hits to DB: 38,855,695
Number of extensions: 3731
Number of successful extensions: 3731
Number of sequences better than 1.0e-05: 1
Number of HSP's gapped: 3728
Number of HSP's successfully gapped: 23
Length of query: 1287
Length of database: 2,808,509,378
Length adjustment: 21
Effective length of query: 1266
Effective length of database: 2,808,413,156
Effective search space: 3555451055496
Effective search space used: 3555451055496
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 18 (36.2 bits)
S2: 30 (60.0 bits)