Animal-Genome cDNA 20110601C-012848

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-012848
         (1588 letters)

Database: RefSeq49_BP.fasta 
           33,088 sequences; 17,681,374 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_001076891.1| serine/threonine-protein kinase 17A [Bos tau...   659   0.0  
Alignment   gi|NP_001033169.1| serine/threonine-protein kinase 17B [Bos tau...   367   e-101
Alignment   gi|NP_001192967.1| death-associated protein kinase 1 [Bos tauru...   258   1e-68
Alignment   gi|XP_002689872.1| PREDICTED: Death-associated protein kinase 1...   258   1e-68
Alignment   gi|XP_002690922.1| PREDICTED: death-associated protein kinase 3...   256   3e-68
Alignment   gi|NP_001094594.1| death-associated protein kinase 3 [Bos tauru...   253   3e-67
Alignment   gi|XP_607571.4| PREDICTED: death-associated protein kinase 3-li...   248   1e-65
Alignment   gi|XP_002686939.1| PREDICTED: serine/threonine kinase 17a-like ...   194   1e-56
Alignment   gi|XP_002697631.1| PREDICTED: myosin light chain kinase 2, skel...   218   2e-56
Alignment   gi|NP_001077188.1| myosin light chain kinase 2, skeletal/cardia...   214   1e-55

>ref|NP_001076891.1| serine/threonine-protein kinase 17A [Bos taurus].
          Length = 414

 Score =  659 bits (1701), Expect = 0.0
 Identities = 339/414 (81%), Positives = 354/414 (85%), Gaps = 2/414 (0%)
 Frame = +3

Query: 132  MIPLEKPGSGDSXXXXXXXXXXXXXXXXXXXXXXXXXXXX--LTEIRTAVRTEPFQDSYS 305
            MIPLEKPGSG S                              LTEIRTAVRTEPFQD+Y+
Sbjct: 1    MIPLEKPGSGGSSPAVASGSGRAGRGLSTPRRPPPPTQARGLLTEIRTAVRTEPFQDAYT 60

Query: 306  LSPGRELGRGKFAVVRKCIKKDSGREFAAKFMRKRRKGQDCRMEIIHEIAVLELAQDNPW 485
            L+PGRELGRGKFAVVRKCIKKDSG+EFAAKFMRKRRKGQDCRMEI+HEIAVLELAQDNPW
Sbjct: 61   LTPGRELGRGKFAVVRKCIKKDSGKEFAAKFMRKRRKGQDCRMEIVHEIAVLELAQDNPW 120

Query: 486  VINLHEVYETPSEMILVLEYAAGGEIFDQCVADREEAFTEKDVQRLMRQILEGVRFLHAH 665
            VINLHEVYETPSEMILVLEYAAGGEIFDQCVADR+EAFTEKDVQRLMRQILEGV FLHAH
Sbjct: 121  VINLHEVYETPSEMILVLEYAAGGEIFDQCVADRDEAFTEKDVQRLMRQILEGVCFLHAH 180

Query: 666  DVVHLDLKPQNILLTSESPLGDIKIVDFGLSRIMKKSEELREIMGTPEYVAPEILSYDPI 845
            DVVHLDLKPQNILLTSESPLGDIKIVDFGLSRIMKKSEELREIMGTPEYVAPE+LSYDPI
Sbjct: 181  DVVHLDLKPQNILLTSESPLGDIKIVDFGLSRIMKKSEELREIMGTPEYVAPEVLSYDPI 240

Query: 846  SMATDMWSIGVLTYVMLTGVSPFLGDSKQETFLNISRMNLNYSEEEFDVVSESAVDFIKA 1025
            S ATDMWSIGVL YVMLTG+SPFLGD KQETFLNIS+MNL+YSEEEFDVVSESAVDFIK 
Sbjct: 241  STATDMWSIGVLAYVMLTGISPFLGDDKQETFLNISQMNLSYSEEEFDVVSESAVDFIKT 300

Query: 1026 LLVKEPEDRATAEECLKHPWLAQGSAQEPSCKLKGAPEEAQALQEGDSVPESNSDXXXXX 1205
            LLVK+PEDRATAEECLKHPWL Q   QEP+ K+KGA EEA ALQE D V ESNSD     
Sbjct: 301  LLVKKPEDRATAEECLKHPWLTQSGVQEPAFKVKGALEEAHALQEADPVSESNSDTQKPE 360

Query: 1206 XXXXXXXXXLIVVTSYTLGQCRQSEKEKMEQKAISKRFKFEEPLLQEIPGDFIY 1367
                     LI+VTSYTLGQCRQSEKEKMEQKAISKRFKFEEPLLQ+IPGDFIY
Sbjct: 361  TEESIVTEELILVTSYTLGQCRQSEKEKMEQKAISKRFKFEEPLLQDIPGDFIY 414


>ref|NP_001033169.1| serine/threonine-protein kinase 17B [Bos taurus].
          Length = 372

 Score =  367 bits (942), Expect = e-101
 Identities = 193/364 (53%), Positives = 253/364 (69%), Gaps = 3/364 (0%)
 Frame = +3

Query: 255  TEIRTAVRTEPFQDSYSLSPGRELGRGKFAVVRKCIKKDSGREFAAKFMRKRRKGQDCRM 434
            T  +T ++ E F + Y+L+  +ELGRGKFAVVR+CI K +G+E+AAKF++KRR+GQDCR 
Sbjct: 17   TTPQTPIKVENFNNFYTLT-SKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRA 75

Query: 435  EIIHEIAVLELAQDNPWVINLHEVYETPSEMILVLEYAAGGEIFDQCVADREEAFTEKDV 614
            EI+HEIAVLEL +  P VINLHEVYE  SE+IL+LEYAAGGEIF+ C+ +  E  +E D+
Sbjct: 76   EILHEIAVLELTKSCPHVINLHEVYENTSEIILILEYAAGGEIFNLCLPELAEMVSENDI 135

Query: 615  QRLMRQILEGVRFLHAHDVVHLDLKPQNILLTSESPLGDIKIVDFGLSRIMKKSEELREI 794
             RL++QILEGV +LH +++VHLDLKPQNILL+S  PLGDIKIVDFG+SR +  + ELREI
Sbjct: 136  IRLIKQILEGVHYLHQNNIVHLDLKPQNILLSSMYPLGDIKIVDFGMSRKIGNACELREI 195

Query: 795  MGTPEYVAPEILSYDPISMATDMWSIGVLTYVMLTGVSPFLGDSKQETFLNISRMNLNYS 974
            MGTPEY+APEIL+YDPI+ ATDMW++GV+ Y++LT  SPF+G+  QET+LNIS++N++YS
Sbjct: 196  MGTPEYLAPEILNYDPITTATDMWNVGVIAYMLLTHTSPFVGEDNQETYLNISQVNVDYS 255

Query: 975  EEEFDVVSESAVDFIKALLVKEPEDRATAEECLKHPWLAQGSAQEPSCKLKGAPEEAQAL 1154
            EE F  VS+ A DFI+ LLVK PE R TAE CL H WL Q             PEE  + 
Sbjct: 256  EETFSSVSQLATDFIQRLLVKNPEKRPTAEICLSHSWLQQWDFGN-----LFHPEETSSF 310

Query: 1155 QEGDSVPESNSDXXXXXXXXXXXXXXLIVVTSYTLGQCRQSE-KEKM--EQKAISKRFKF 1325
             +    P  +S+                       G C   E KE +  +   +SKRF+F
Sbjct: 311  SQSQDHPVRSSEDRTHRPSCN--------------GTCSDREDKENIPEDSSTVSKRFRF 356

Query: 1326 EEPL 1337
            ++ L
Sbjct: 357  DDSL 360


>ref|NP_001192967.1| death-associated protein kinase 1 [Bos taurus].
          Length = 1430

 Score =  258 bits (659), Expect = 1e-68
 Identities = 133/286 (46%), Positives = 189/286 (66%), Gaps = 5/286 (1%)
 Frame = +3

Query: 267  TAVRTEPFQDSYSLSPGRELGRGKFAVVRKCIKKDSGREFAAKFMRKRRKGQD----CRM 434
            T  R E   D Y    G ELG G+FAVV+KC +K +G ++AAKF++KRR         R 
Sbjct: 2    TVFRQENVDDYYDT--GEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSRE 59

Query: 435  EIIHEIAVLELAQDNPWVINLHEVYETPSEMILVLEYAAGGEIFDQCVADREEAFTEKDV 614
            +I  E+++L+  Q +P VI LHEVYE  +++IL+LE  AGGE+FD      +E+ TE++ 
Sbjct: 60   DIEREVSILKEIQ-HPNVITLHEVYENKTDVILILELVAGGELFDFLA--EKESLTEEEA 116

Query: 615  QRLMRQILEGVRFLHAHDVVHLDLKPQNILLTSES-PLGDIKIVDFGLSRIMKKSEELRE 791
               ++QIL GV +LH+  + H DLKP+NI+L   + P   IKI+DFGL+  +    E + 
Sbjct: 117  TEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN 176

Query: 792  IMGTPEYVAPEILSYDPISMATDMWSIGVLTYVMLTGVSPFLGDSKQETFLNISRMNLNY 971
            I GTPE+VAPEI++Y+P+ +  DMWSIGV+TY++L+G SPFLGDSKQET  N+S +N  +
Sbjct: 177  IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDSKQETLANVSAVNYEF 236

Query: 972  SEEEFDVVSESAVDFIKALLVKEPEDRATAEECLKHPWLAQGSAQE 1109
             EE F   S  A DFI+ LLVK+P+ R T ++ L+HPW+     Q+
Sbjct: 237  EEEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQQ 282


>ref|XP_002689872.1| PREDICTED: Death-associated protein kinase 1-like, partial [Bos
            taurus].
          Length = 1020

 Score =  258 bits (659), Expect = 1e-68
 Identities = 133/286 (46%), Positives = 189/286 (66%), Gaps = 5/286 (1%)
 Frame = +3

Query: 267  TAVRTEPFQDSYSLSPGRELGRGKFAVVRKCIKKDSGREFAAKFMRKRRKGQD----CRM 434
            T  R E   D Y    G ELG G+FAVV+KC +K +G ++AAKF++KRR         R 
Sbjct: 2    TVFRQENVDDYYDT--GEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSRE 59

Query: 435  EIIHEIAVLELAQDNPWVINLHEVYETPSEMILVLEYAAGGEIFDQCVADREEAFTEKDV 614
            +I  E+++L+  Q +P VI LHEVYE  +++IL+LE  AGGE+FD      +E+ TE++ 
Sbjct: 60   DIEREVSILKEIQ-HPNVITLHEVYENKTDVILILELVAGGELFDFLA--EKESLTEEEA 116

Query: 615  QRLMRQILEGVRFLHAHDVVHLDLKPQNILLTSES-PLGDIKIVDFGLSRIMKKSEELRE 791
               ++QIL GV +LH+  + H DLKP+NI+L   + P   IKI+DFGL+  +    E + 
Sbjct: 117  TEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN 176

Query: 792  IMGTPEYVAPEILSYDPISMATDMWSIGVLTYVMLTGVSPFLGDSKQETFLNISRMNLNY 971
            I GTPE+VAPEI++Y+P+ +  DMWSIGV+TY++L+G SPFLGDSKQET  N+S +N  +
Sbjct: 177  IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDSKQETLANVSAVNYEF 236

Query: 972  SEEEFDVVSESAVDFIKALLVKEPEDRATAEECLKHPWLAQGSAQE 1109
             EE F   S  A DFI+ LLVK+P+ R T ++ L+HPW+     Q+
Sbjct: 237  EEEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQQ 282


>ref|XP_002690922.1| PREDICTED: death-associated protein kinase 3-like [Bos taurus].
          Length = 483

 Score =  256 bits (655), Expect = 3e-68
 Identities = 127/285 (44%), Positives = 197/285 (69%), Gaps = 6/285 (2%)
 Frame = +3

Query: 276  RTEPFQDSYSLSPGRELGRGKFAVVRKCIKKDSGREFAAKFMRKRRKGQD----CRMEII 443
            + +  +D Y +  G ELG G+FA+V+KC +K +G E+AAKF++KR+        CR EI 
Sbjct: 10   KQQKVEDFYDI--GEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSPASRRGVCREEIE 67

Query: 444  HEIAVLELAQDNPWVINLHEVYETPSEMILVLEYAAGGEIFDQCVADREEAFTEKDVQRL 623
             E+++L     +P VI LH+V+E  ++++L+LE  +GGE+FD     ++E+ +E++    
Sbjct: 68   REVSILRQVL-HPNVITLHDVFENRTDVVLILELVSGGELFDFLA--QKESLSEEEATSF 124

Query: 624  MRQILEGVRFLHAHDVVHLDLKPQNILLTSES-PLGDIKIVDFGLSRIMKKSEELREIMG 800
            ++QILEGV +LHA  + H DLKP+NI+L  ++ P+  IK++DFGL+  ++   E + I G
Sbjct: 125  IKQILEGVNYLHAKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFG 184

Query: 801  TPEYVAPEILSYDPISMATDMWSIGVLTYVMLTGVSPFLGDSKQETFLNISRMNLNYSEE 980
            TPE+VAPEI++Y+P+ +  DMWSIGV+TY++L+G SPFLGD+KQET  NI+ ++ ++ EE
Sbjct: 185  TPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEE 244

Query: 981  EFDVVSESAVDFIKALLVKEPEDRATAEECLKHPW-LAQGSAQEP 1112
             F   SE A DFI+ LLVKE   R T +E L+HPW +++G  + P
Sbjct: 245  FFSQTSELAKDFIRKLLVKETRKRLTIQEALRHPWIMSKGEIRAP 289


>ref|NP_001094594.1| death-associated protein kinase 3 [Bos taurus].
          Length = 454

 Score =  253 bits (646), Expect = 3e-67
 Identities = 131/319 (41%), Positives = 208/319 (65%), Gaps = 15/319 (4%)
 Frame = +3

Query: 276  RTEPFQDSYSLSPGRELGRGKFAVVRKCIKKDSGREFAAKFMRKRRKGQD----CRMEII 443
            R E  +D Y +  G ELG G+FA+VRKC +K +G+E+AAKF++KRR         R EI 
Sbjct: 5    RQEDVEDHYEM--GEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIE 62

Query: 444  HEIAVLELAQDNPWVINLHEVYETPSEMILVLEYAAGGEIFDQCVADREEAFTEKDVQRL 623
             E+ +L   + +P +I LH+++E  ++++L+LE  +GGE+FD      +E+ TE +  + 
Sbjct: 63   REVNILREIR-HPNIITLHDIFENRTDVVLILELVSGGELFDFLA--EKESLTEDEATQF 119

Query: 624  MRQILEGVRFLHAHDVVHLDLKPQNILLTSES-PLGDIKIVDFGLSRIMKKSEELREIMG 800
            ++QIL+GV +LH+  + H DLKP+NI+L  ++ P   IK++DFG++  ++   E + I G
Sbjct: 120  LKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFG 179

Query: 801  TPEYVAPEILSYDPISMATDMWSIGVLTYVMLTGVSPFLGDSKQETFLNISRMNLNYSEE 980
            TPE+VAPEI++Y+P+ +  DMWSIGV+TY++L+G SPFLG++KQET  NIS +N ++ EE
Sbjct: 180  TPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEE 239

Query: 981  EFDVVSESAVDFIKALLVKEPEDRATAEECLKHPWL---------AQGSAQEPS-CKLKG 1130
             F   SE A DFI+ LLVK+P+ R T  + L+H W+          + S ++P   +LK 
Sbjct: 240  YFSNTSELAKDFIRRLLVKDPKRRMTIAQSLEHSWIKAIRRRNVRREDSGRKPERRRLKT 299

Query: 1131 APEEAQALQEGDSVPESNS 1187
            A  +   ++   S+P +N+
Sbjct: 300  ARLKEYTIKSHSSMPPNNT 318


>ref|XP_607571.4| PREDICTED: death-associated protein kinase 3-like [Bos taurus].
          Length = 460

 Score =  248 bits (633), Expect = 1e-65
 Identities = 121/269 (44%), Positives = 188/269 (69%), Gaps = 6/269 (2%)
 Frame = +3

Query: 324  LGRGKFAVVRKCIKKDSGREFAAKFMRKRRKGQD----CRMEIIHEIAVLELAQDNPWVI 491
            +  G+FA+V+KC +K +G E+AAKF++KR+        CR EI  E+++L     +P VI
Sbjct: 1    MASGQFAIVKKCREKSTGLEYAAKFIKKRQSPASRRGVCREEIEREVSILRQVL-HPNVI 59

Query: 492  NLHEVYETPSEMILVLEYAAGGEIFDQCVADREEAFTEKDVQRLMRQILEGVRFLHAHDV 671
             LH+V+E  ++++L+LE  +GGE+FD     ++E+ +E++    ++QILEGV +LHA  +
Sbjct: 60   TLHDVFENRTDVVLILELVSGGELFDFLA--QKESLSEEEATSFIKQILEGVNYLHAKKI 117

Query: 672  VHLDLKPQNILLTSES-PLGDIKIVDFGLSRIMKKSEELREIMGTPEYVAPEILSYDPIS 848
             H DLKP+NI+L  ++ P+  IK++DFGL+  ++   E + I GTPE+VAPEI++Y+P+ 
Sbjct: 118  AHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLG 177

Query: 849  MATDMWSIGVLTYVMLTGVSPFLGDSKQETFLNISRMNLNYSEEEFDVVSESAVDFIKAL 1028
            +  DMWSIGV+TY++L+G SPFLGD+KQET  NI+ ++ ++ EE F   SE A DFI+ L
Sbjct: 178  LEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFSQTSELAKDFIRKL 237

Query: 1029 LVKEPEDRATAEECLKHPW-LAQGSAQEP 1112
            LVKE   R T +E L+HPW +++G  + P
Sbjct: 238  LVKETRKRLTIQEALRHPWIMSKGEIRAP 266


>ref|XP_002686939.1| PREDICTED: serine/threonine kinase 17a-like [Bos taurus].
          Length = 291

 Score =  194 bits (492), Expect(2) = 1e-56
 Identities = 102/139 (73%), Positives = 107/139 (76%), Gaps = 2/139 (1%)
 Frame = +3

Query: 132 MIPLEKPGSGDSXXXXXXXXXXXXXXXXXXXXXXXXXXXX--LTEIRTAVRTEPFQDSYS 305
           MIPLEKPGSG S                              LTEIRTAVRTE FQD+Y+
Sbjct: 153 MIPLEKPGSGGSSPAVASGSGRAGRGLSTPRRPPPPTQARGLLTEIRTAVRTEHFQDAYT 212

Query: 306 LSPGRELGRGKFAVVRKCIKKDSGREFAAKFMRKRRKGQDCRMEIIHEIAVLELAQDNPW 485
           L+PGRELGRGKFAVVRKCIKKDSG+EFAAKFMRKRRKGQDCRMEI+HEIAVLELAQDNPW
Sbjct: 213 LTPGRELGRGKFAVVRKCIKKDSGKEFAAKFMRKRRKGQDCRMEIVHEIAVLELAQDNPW 272

Query: 486 VINLHEVYETPSEMILVLE 542
           VINLHEVYETPSEMILVLE
Sbjct: 273 VINLHEVYETPSEMILVLE 291



 Score = 45.8 bits (107), Expect(2) = 1e-56
 Identities = 25/42 (59%), Positives = 31/42 (73%)
 Frame = +1

Query: 1   ESERGAEESGCFPPTGWRLLEAGPLPAGSSERAGRPESRRAR 126
           +S R + +SG  P  G R LEAGPLPAGSSERAG  ++R+AR
Sbjct: 109 QSVRSSGQSGWHPRAGSRQLEAGPLPAGSSERAGW-QARKAR 149


>ref|XP_002697631.1| PREDICTED: myosin light chain kinase 2, skeletal/cardiac muscle-like
            [Bos taurus].
          Length = 394

 Score =  218 bits (554), Expect = 2e-56
 Identities = 121/293 (41%), Positives = 181/293 (61%)
 Frame = +3

Query: 300  YSLSPGRELGRGKFAVVRKCIKKDSGREFAAKFMRKRRKGQDCRMEIIHEIAVLELAQDN 479
            Y++S    LG G+F  V KC +K +G + AAK ++ R  G   + ++ +EI+V+    D+
Sbjct: 101  YTVSRTEILGGGRFGQVHKCEEKATGLKLAAKIIKTR--GVKDKDDVKNEISVMNQL-DH 157

Query: 480  PWVINLHEVYETPSEMILVLEYAAGGEIFDQCVADREEAFTEKDVQRLMRQILEGVRFLH 659
              +I L++ +E+ ++++LV+EY  GGE+FD+ + D     TE D    +RQI EG+R +H
Sbjct: 158  VNLIQLYDAFESKNDIVLVMEYVDGGELFDRIIDDNCN-LTELDTILFIRQICEGIRHMH 216

Query: 660  AHDVVHLDLKPQNILLTSESPLGDIKIVDFGLSRIMKKSEELREIMGTPEYVAPEILSYD 839
               ++HLDLKP+NIL  +      IKI+DFGL+R  K  E+L+   GTPE++APE+++YD
Sbjct: 217  QMYILHLDLKPENILCVNRDTK-QIKIIDFGLARRYKPREKLKVNFGTPEFLAPEVVNYD 275

Query: 840  PISMATDMWSIGVLTYVMLTGVSPFLGDSKQETFLNISRMNLNYSEEEFDVVSESAVDFI 1019
             +S  TDMWS+GV+TY++L+G+SPFLGD   ET  NI     +  ++EF  VSE A +FI
Sbjct: 276  FVSFPTDMWSVGVITYMLLSGLSPFLGDDDAETLNNILACRWDLEDQEFQDVSEEAREFI 335

Query: 1020 KALLVKEPEDRATAEECLKHPWLAQGSAQEPSCKLKGAPEEAQALQEGDSVPE 1178
              LL+KE   R +A E LKHPWL+         +L   P    AL    + PE
Sbjct: 336  SKLLIKEKSWRISASEALKHPWLSDPKLHS---RLSTQPRPEAALFPATTNPE 385


>ref|NP_001077188.1| myosin light chain kinase 2, skeletal/cardiac muscle [Bos taurus].
          Length = 623

 Score =  214 bits (546), Expect = 1e-55
 Identities = 114/282 (40%), Positives = 174/282 (61%)
 Frame = +3

Query: 273  VRTEPFQDSYSLSPGRELGRGKFAVVRKCIKKDSGREFAAKFMRKRRKGQDCRMEIIHEI 452
            +R       +SL+    LG GKF  V  C +K +G + AAK ++K+   +D  M ++   
Sbjct: 301  LRPGNINSQFSLNSKEALGGGKFGAVCTCTEKATGLKLAAKVIKKQTP-KDKEMVLLEIE 359

Query: 453  AVLELAQDNPWVINLHEVYETPSEMILVLEYAAGGEIFDQCVADREEAFTEKDVQRLMRQ 632
             + +L   N  +I L+   ETP E++L +EY  GGE+F++ V D +   TE D    +RQ
Sbjct: 360  VMNQLNHRN--LIQLYAAIETPHEIVLFMEYIEGGELFERIV-DEDYQLTEVDTMVFVRQ 416

Query: 633  ILEGVRFLHAHDVVHLDLKPQNILLTSESPLGDIKIVDFGLSRIMKKSEELREIMGTPEY 812
            I +G+ F+H   V+HLDLKP+NIL  + +    +KI+DFGL+R    +E+L+   GTPE+
Sbjct: 417  ICDGILFMHKMRVLHLDLKPENILCVNTTG-HLVKIIDFGLARRYNPNEKLKVNFGTPEF 475

Query: 813  VAPEILSYDPISMATDMWSIGVLTYVMLTGVSPFLGDSKQETFLNISRMNLNYSEEEFDV 992
            ++PE+++YD IS  TDMWS+GV+TY++L+G+SPFLGD   ET  N+   N  + EE F+ 
Sbjct: 476  LSPEVVNYDQISDKTDMWSLGVITYMLLSGLSPFLGDDDTETLNNVLSSNWYFDEETFEA 535

Query: 993  VSESAVDFIKALLVKEPEDRATAEECLKHPWLAQGSAQEPSC 1118
            VS+ A DF+  L+VK+   R +A +CL HPWL   + +   C
Sbjct: 536  VSDEAKDFVSNLIVKDQRARMSAAQCLAHPWLNNLAEKAKRC 577


  Database: RefSeq49_BP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 17,681,374
  Number of sequences in database:  33,088
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33088
Number of Hits to DB: 51,787,867
Number of extensions: 1277981
Number of successful extensions: 6480
Number of sequences better than 1.0e-05: 596
Number of HSP's gapped: 5231
Number of HSP's successfully gapped: 628
Length of query: 529
Length of database: 17,681,374
Length adjustment: 107
Effective length of query: 422
Effective length of database: 14,140,958
Effective search space: 5967484276
Effective search space used: 5967484276
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-012848
         (1588 letters)

Database: RefSeq49_CP.fasta 
           33,336 sequences; 18,874,504 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|XP_540360.2| PREDICTED: similar to Serine/threonine-protein ...   611   e-175
Alignment   gi|XP_545575.1| PREDICTED: similar to Serine/threonine-protein ...   363   e-100
Alignment   gi|NP_001184086.1| death-associated protein kinase 1 [Canis lup...   257   3e-68
Alignment   gi|XP_853317.1| PREDICTED: similar to death-associated kinase 2...   255   1e-67
Alignment   gi|XP_533950.2| PREDICTED: similar to Death-associated protein ...   253   4e-67
Alignment   gi|XP_545312.2| PREDICTED: similar to myosin light chain kinase...   215   1e-55
Alignment   gi|XP_534377.2| PREDICTED: similar to skeletal myosin light cha...   211   2e-54
Alignment   gi|XP_532569.2| PREDICTED: similar to cardiac-MyBP-C associated...   208   1e-53
Alignment   gi|XP_857915.1| PREDICTED: similar to myosin light chain kinase...   206   4e-53
Alignment   gi|XP_857720.1| PREDICTED: similar to myosin light chain kinase...   206   4e-53

>ref|XP_540360.2| PREDICTED: similar to Serine/threonine-protein kinase 17A (DAP
            kinase-related apoptosis-inducing protein kinase 1)
            [Canis familiaris].
          Length = 352

 Score =  611 bits (1576), Expect = e-175
 Identities = 308/346 (89%), Positives = 320/346 (92%)
 Frame = +3

Query: 330  RGKFAVVRKCIKKDSGREFAAKFMRKRRKGQDCRMEIIHEIAVLELAQDNPWVINLHEVY 509
            RGKFAVVRKCIKKDSG+EFAAKFMRKRRKGQDCRMEIIHEIAVLELAQDNPWVINLHEVY
Sbjct: 7    RGKFAVVRKCIKKDSGKEFAAKFMRKRRKGQDCRMEIIHEIAVLELAQDNPWVINLHEVY 66

Query: 510  ETPSEMILVLEYAAGGEIFDQCVADREEAFTEKDVQRLMRQILEGVRFLHAHDVVHLDLK 689
            ETPSEMILVLEYAAGGEIFDQCVADREEAF EKDVQRLMRQILEGVRFLHAHDVVHLDLK
Sbjct: 67   ETPSEMILVLEYAAGGEIFDQCVADREEAFKEKDVQRLMRQILEGVRFLHAHDVVHLDLK 126

Query: 690  PQNILLTSESPLGDIKIVDFGLSRIMKKSEELREIMGTPEYVAPEILSYDPISMATDMWS 869
            PQNILLTSESPLGDIKIVDFGLSRIMK SEELREIMGTPEYVAPEILSYDPISMATDMWS
Sbjct: 127  PQNILLTSESPLGDIKIVDFGLSRIMKNSEELREIMGTPEYVAPEILSYDPISMATDMWS 186

Query: 870  IGVLTYVMLTGVSPFLGDSKQETFLNISRMNLNYSEEEFDVVSESAVDFIKALLVKEPED 1049
            IGVLTYVMLTG+SPFLGD+KQETFLNIS+M+L+YSEEEFDVVSESA+DFIK LLVK+PED
Sbjct: 187  IGVLTYVMLTGISPFLGDNKQETFLNISQMSLSYSEEEFDVVSESAIDFIKTLLVKKPED 246

Query: 1050 RATAEECLKHPWLAQGSAQEPSCKLKGAPEEAQALQEGDSVPESNSDXXXXXXXXXXXXX 1229
            RATAEECLKHPWL + S Q+PS K+KGA  EA ALQEGDSVPE NSD             
Sbjct: 247  RATAEECLKHPWLTESSIQDPSFKVKGALAEANALQEGDSVPEINSDTQKPETEESVVTE 306

Query: 1230 XLIVVTSYTLGQCRQSEKEKMEQKAISKRFKFEEPLLQEIPGDFIY 1367
             LIV TSYTLGQCRQSEKEKMEQKAISKRFKFEEPLLQEIPG+FIY
Sbjct: 307  ELIVFTSYTLGQCRQSEKEKMEQKAISKRFKFEEPLLQEIPGEFIY 352


>ref|XP_545575.1| PREDICTED: similar to Serine/threonine-protein kinase 17B (DAP
            kinase-related apoptosis-inducing protein kinase 2)
            [Canis familiaris].
          Length = 372

 Score =  363 bits (932), Expect = e-100
 Identities = 194/364 (53%), Positives = 255/364 (70%), Gaps = 6/364 (1%)
 Frame = +3

Query: 264  RTAVRTEPFQDSYSLSPGRELGRGKFAVVRKCIKKDSGREFAAKFMRKRRKGQDCRMEII 443
            +T ++ E F + Y+L+  +ELGRGKFAVVR+CI K +G+E+AAKF++KRR+GQDCR EI+
Sbjct: 20   QTPMKMENFNNFYTLT-SKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEIL 78

Query: 444  HEIAVLELAQDNPWVINLHEVYETPSEMILVLEYAAGGEIFDQCVADREEAFTEKDVQRL 623
            HEIA+LELA+  P VINLHEVYE  SE+IL+LEYAAGGEIF+ C+ +  E  +E D+ RL
Sbjct: 79   HEIAILELAKSCPHVINLHEVYENTSEIILILEYAAGGEIFNLCLPELAEMVSENDIIRL 138

Query: 624  MRQILEGVRFLHAHDVVHLDLKPQNILLTSESPLGDIKIVDFGLSRIMKKSEELREIMGT 803
            ++QILEGV +LH +++VHLDLKPQNILL+S  PLGDIKIVDFG+SR +  + ELREIMGT
Sbjct: 139  IKQILEGVCYLHQNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGNACELREIMGT 198

Query: 804  PEYVAPEILSYDPISMATDMWSIGVLTYVMLTGVSPFLGDSKQETFLNISRMNLNYSEEE 983
            PEY+APEIL+YDPI+ ATDMW++G++ Y++LT  SPF+G+  QET+LNIS++N++YSEE 
Sbjct: 199  PEYLAPEILNYDPITTATDMWNVGIIAYMLLTHTSPFVGEDNQETYLNISQVNVDYSEET 258

Query: 984  FDVVSESAVDFIKALLVKEPEDRATAEECLKHPWLAQ---GSAQEPSCKLKGAPEEAQAL 1154
            F  VS+ A DFI+ LLVK PE R TAE CL H WL Q   G+   P        E + + 
Sbjct: 259  FSSVSQLATDFIQRLLVKNPEKRPTAEICLSHSWLQQWDFGNLFHPE-------ETSSSS 311

Query: 1155 QEGDSVPESNSDXXXXXXXXXXXXXXLIVVTSYTLGQCRQSE-KEKM--EQKAISKRFKF 1325
            Q  D    S+ D                   S   G C   E KE +  +   +SKRF+F
Sbjct: 312  QSQDHSLRSSEDK---------------TSKSSCNGTCSDREDKENIPEDSSMVSKRFRF 356

Query: 1326 EEPL 1337
            +  L
Sbjct: 357  DNSL 360


>ref|NP_001184086.1| death-associated protein kinase 1 [Canis lupus familiaris].
          Length = 1430

 Score =  257 bits (656), Expect = 3e-68
 Identities = 132/286 (46%), Positives = 189/286 (66%), Gaps = 5/286 (1%)
 Frame = +3

Query: 267  TAVRTEPFQDSYSLSPGRELGRGKFAVVRKCIKKDSGREFAAKFMRKRRKGQD----CRM 434
            T  R E   D Y    G ELG G+FAVV+KC +K +G ++AAKF++KRR         R 
Sbjct: 2    TVFRQENVDDYYDT--GEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSRE 59

Query: 435  EIIHEIAVLELAQDNPWVINLHEVYETPSEMILVLEYAAGGEIFDQCVADREEAFTEKDV 614
            +I  E+++L+  Q +P VI LHEVYE  +++IL+LE  AGGE+FD      +E+ TE++ 
Sbjct: 60   DIEREVSILKEIQ-HPNVITLHEVYENKTDVILILELVAGGELFDFLA--EKESLTEEEA 116

Query: 615  QRLMRQILEGVRFLHAHDVVHLDLKPQNILLTSES-PLGDIKIVDFGLSRIMKKSEELRE 791
               ++QIL GV +LH+  + H DLKP+NI+L   + P   IKI+DFGL+  +    E + 
Sbjct: 117  TEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN 176

Query: 792  IMGTPEYVAPEILSYDPISMATDMWSIGVLTYVMLTGVSPFLGDSKQETFLNISRMNLNY 971
            I GTPE+VAPEI++Y+P+ +  DMWSIGV+TY++L+G SPFLGD+KQET  N+S +N  +
Sbjct: 177  IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEF 236

Query: 972  SEEEFDVVSESAVDFIKALLVKEPEDRATAEECLKHPWLAQGSAQE 1109
             EE F   S  A DFI+ LLVK+P+ R T ++ L+HPW+     Q+
Sbjct: 237  EEEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQQ 282


>ref|XP_853317.1| PREDICTED: similar to death-associated kinase 2 [Canis familiaris].
          Length = 402

 Score =  255 bits (651), Expect = 1e-67
 Identities = 125/283 (44%), Positives = 194/283 (68%), Gaps = 5/283 (1%)
 Frame = +3

Query: 276  RTEPFQDSYSLSPGRELGRGKFAVVRKCIKKDSGREFAAKFMRKRRKGQD----CRMEII 443
            + +  +D Y +  G ELG G+FA+V+KC +K +G E+AAKF++KR+        CR EI 
Sbjct: 47   KQQKVEDFYDI--GEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIE 104

Query: 444  HEIAVLELAQDNPWVINLHEVYETPSEMILVLEYAAGGEIFDQCVADREEAFTEKDVQRL 623
             E+++L     +P VI LH+V+E  ++++L+LE  +GGE+FD     ++E+ +E++    
Sbjct: 105  REVSILRQVL-HPNVITLHDVFENRTDVVLILELVSGGELFDFLA--QKESLSEEEATSF 161

Query: 624  MRQILEGVRFLHAHDVVHLDLKPQNILLTSES-PLGDIKIVDFGLSRIMKKSEELREIMG 800
            ++QIL+GV +LHA  + H DLKP+NI+L  ++ P+  IK++DFGL+  ++   E + I G
Sbjct: 162  IKQILDGVNYLHAKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFG 221

Query: 801  TPEYVAPEILSYDPISMATDMWSIGVLTYVMLTGVSPFLGDSKQETFLNISRMNLNYSEE 980
            TPE+VAPEI++Y+P+ +  DMWSIGV+TY++L+G SPFLGD+KQET  NI+ ++ ++ EE
Sbjct: 222  TPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEE 281

Query: 981  EFDVVSESAVDFIKALLVKEPEDRATAEECLKHPWLAQGSAQE 1109
             F   SE A DFI+ LLVKE   R T +E L+HPW+     Q+
Sbjct: 282  FFSQTSELAKDFIRKLLVKETRKRLTIQEALRHPWITPVDNQQ 324


>ref|XP_533950.2| PREDICTED: similar to Death-associated protein kinase 3 (DAP kinase
            3) (DAP-like kinase) (Dlk) (ZIP-kinase) [Canis
            familiaris].
          Length = 454

 Score =  253 bits (646), Expect = 4e-67
 Identities = 131/319 (41%), Positives = 208/319 (65%), Gaps = 15/319 (4%)
 Frame = +3

Query: 276  RTEPFQDSYSLSPGRELGRGKFAVVRKCIKKDSGREFAAKFMRKRRKGQD----CRMEII 443
            R E  +D Y +  G ELG G+FA+VRKC +K +G+E+AAKF++KRR         R EI 
Sbjct: 5    RQEDVEDYYEM--GEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIE 62

Query: 444  HEIAVLELAQDNPWVINLHEVYETPSEMILVLEYAAGGEIFDQCVADREEAFTEKDVQRL 623
             E+ +L   + +P +I LH+++E  ++++L+LE  +GGE+FD      +E+ TE +  + 
Sbjct: 63   REVNILREIR-HPNIITLHDIFENKTDVVLILELVSGGELFDFLA--EKESLTEDEATQF 119

Query: 624  MRQILEGVRFLHAHDVVHLDLKPQNILLTSES-PLGDIKIVDFGLSRIMKKSEELREIMG 800
            ++QIL+GV +LH+  + H DLKP+NI+L  ++ P   IK++DFG++  ++   E + I G
Sbjct: 120  LKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFG 179

Query: 801  TPEYVAPEILSYDPISMATDMWSIGVLTYVMLTGVSPFLGDSKQETFLNISRMNLNYSEE 980
            TPE+VAPEI++Y+P+ +  DMWSIGV+TY++L+G SPFLG++KQET  NIS +N ++ EE
Sbjct: 180  TPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEE 239

Query: 981  EFDVVSESAVDFIKALLVKEPEDRATAEECLKHPWL---------AQGSAQEPS-CKLKG 1130
             F   SE A DFI+ LLVK+P+ R T  + L+H W+          + S ++P   +LK 
Sbjct: 240  YFSNTSELAKDFIRRLLVKDPKRRMTIAQSLEHSWIKAIRRRNVRREDSGRKPERRRLKT 299

Query: 1131 APEEAQALQEGDSVPESNS 1187
            A  +   ++   S+P +N+
Sbjct: 300  ARLKEYTIKSHSSMPPNNT 318


>ref|XP_545312.2| PREDICTED: similar to myosin light chain kinase [Canis familiaris].
          Length = 405

 Score =  215 bits (547), Expect = 1e-55
 Identities = 113/264 (42%), Positives = 172/264 (65%)
 Frame = +3

Query: 300  YSLSPGRELGRGKFAVVRKCIKKDSGREFAAKFMRKRRKGQDCRMEIIHEIAVLELAQDN 479
            Y++S    LG G+F  V KC +K +G + AAK ++ R  G   + E+ +EI ++    D+
Sbjct: 105  YTVSRTEILGGGRFGQVHKCEEKATGLKLAAKIIKTR--GTKDKDEVKNEINIMNQL-DH 161

Query: 480  PWVINLHEVYETPSEMILVLEYAAGGEIFDQCVADREEAFTEKDVQRLMRQILEGVRFLH 659
              +I L++ +E+ ++++LV+EY  GGE+FD+ + D     TE D    ++QI EG+R +H
Sbjct: 162  VNLIQLYDAFESKNDIVLVMEYVDGGELFDRIIDDNYN-LTEFDTILFIKQICEGIRHMH 220

Query: 660  AHDVVHLDLKPQNILLTSESPLGDIKIVDFGLSRIMKKSEELREIMGTPEYVAPEILSYD 839
               ++HLDLKP+NIL  +      IKI+DFGL+R  K  E+L+   GTPE++APE+++YD
Sbjct: 221  QMYILHLDLKPENILCVNRDAK-QIKIIDFGLARRYKPREKLKVNFGTPEFLAPEVVNYD 279

Query: 840  PISMATDMWSIGVLTYVMLTGVSPFLGDSKQETFLNISRMNLNYSEEEFDVVSESAVDFI 1019
             +S  TDMWS+GV+ Y++L+G+SPFLGD+  ET  NI     +  +EEF  +SE A +FI
Sbjct: 280  FVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILACRWDLEDEEFQDISEEAREFI 339

Query: 1020 KALLVKEPEDRATAEECLKHPWLA 1091
              LL+KE   R +A E LKHPWL+
Sbjct: 340  SKLLIKEKSWRISASEALKHPWLS 363


>ref|XP_534377.2| PREDICTED: similar to skeletal myosin light chain kinase [Canis
            familiaris].
          Length = 634

 Score =  211 bits (536), Expect = 2e-54
 Identities = 112/273 (41%), Positives = 171/273 (62%)
 Frame = +3

Query: 300  YSLSPGRELGRGKFAVVRKCIKKDSGREFAAKFMRKRRKGQDCRMEIIHEIAVLELAQDN 479
            +SL+    LG GKF  V  C +K +G + AAK ++K+   +D  M ++    + +L   N
Sbjct: 321  FSLNSKEALGGGKFGAVCTCTEKATGLKLAAKVIKKQTP-KDKEMVMLEIEVMNQLNHRN 379

Query: 480  PWVINLHEVYETPSEMILVLEYAAGGEIFDQCVADREEAFTEKDVQRLMRQILEGVRFLH 659
              +I L+   ET  E++L +EY  GGE+F++ V D +   TE D    +RQI +G+ F+H
Sbjct: 380  --LIQLYAAIETSHEIVLFMEYIEGGELFERIV-DEDYQLTEVDTMVFVRQICDGILFMH 436

Query: 660  AHDVVHLDLKPQNILLTSESPLGDIKIVDFGLSRIMKKSEELREIMGTPEYVAPEILSYD 839
               V+HLDLKP+NIL  + +    +KI+DFGL+R    +E+L+   GTPE+++PE+++YD
Sbjct: 437  KMRVLHLDLKPENILCVNTTG-HMVKIIDFGLARRYNPNEKLKVNFGTPEFLSPEVVNYD 495

Query: 840  PISMATDMWSIGVLTYVMLTGVSPFLGDSKQETFLNISRMNLNYSEEEFDVVSESAVDFI 1019
             IS  TDMWS+GV+TY++L+G+SPFLGD   ET  N+   N  + EE F+ VS+ A DF+
Sbjct: 496  QISDKTDMWSMGVITYMLLSGLSPFLGDDDTETLNNVLSSNWYFDEETFEAVSDEAKDFV 555

Query: 1020 KALLVKEPEDRATAEECLKHPWLAQGSAQEPSC 1118
              L+VK+   R +A +CL HPWL   + +   C
Sbjct: 556  SNLIVKDQRARMSAAQCLAHPWLNNLAEKAKRC 588


>ref|XP_532569.2| PREDICTED: similar to cardiac-MyBP-C associated Ca/CaM kinase [Canis
            familiaris].
          Length = 1037

 Score =  208 bits (530), Expect = 1e-53
 Identities = 110/277 (39%), Positives = 177/277 (63%), Gaps = 1/277 (0%)
 Frame = +3

Query: 300  YSLSPGRELGRGKFAVVRKCIKKDSGREFAAKFMRKRRKGQDCRMEIIHEIAVL-ELAQD 476
            Y++     LG G+F  V +C +K +G   AAK ++   K    R ++ +E+ ++ +L+  
Sbjct: 710  YTVCQHDVLGGGRFGQVHRCTEKSTGLSLAAKIIKV--KSAKDREDVKNEVNIMNQLSHV 767

Query: 477  NPWVINLHEVYETPSEMILVLEYAAGGEIFDQCVADREEAFTEKDVQRLMRQILEGVRFL 656
            N  +I L++ +E+ +   LV+EY  GGE+FD+ + + +   TE DV    +QI EGV +L
Sbjct: 768  N--LIQLYDAFESKNSFTLVMEYVDGGELFDR-ITEEKYQLTELDVILFTKQICEGVHYL 824

Query: 657  HAHDVVHLDLKPQNILLTSESPLGDIKIVDFGLSRIMKKSEELREIMGTPEYVAPEILSY 836
            H H ++HLDLKP+NIL  +++    IKI+DFGL+R  K  E+L+   GTPE++APE+++Y
Sbjct: 825  HQHYILHLDLKPENILCVNQTG-HQIKIIDFGLARRYKPREKLKVNFGTPEFLAPEVVNY 883

Query: 837  DPISMATDMWSIGVLTYVMLTGVSPFLGDSKQETFLNISRMNLNYSEEEFDVVSESAVDF 1016
            + +S  TDMWS+GV+TY++L+G+SPFLG++  ET   I   + ++  + F+ +SE A DF
Sbjct: 884  EFVSFPTDMWSVGVITYMLLSGLSPFLGETDAETMNFIVNCSWDFDADTFEGLSEEAKDF 943

Query: 1017 IKALLVKEPEDRATAEECLKHPWLAQGSAQEPSCKLK 1127
            +  LLVKE   R +A +CLKH WL    A+    K++
Sbjct: 944  VSRLLVKEKSCRMSATQCLKHEWLNNLPAKASKSKVR 980


>ref|XP_857915.1| PREDICTED: similar to myosin light chain kinase isoform 2 isoform 8
            [Canis familiaris].
          Length = 1845

 Score =  206 bits (525), Expect = 4e-53
 Identities = 102/272 (37%), Positives = 177/272 (65%)
 Frame = +3

Query: 309  SPGRELGRGKFAVVRKCIKKDSGREFAAKFMRKRRKGQDCRMEIIHEIAVLELAQDNPWV 488
            S GR +G GKF  V + ++K +G+ +A KF +     +  +  I  EI+++     +P +
Sbjct: 1395 SRGR-VGLGKFGQVFRLVEKKTGKIWAGKFFKAYSAKE--KENIRQEISIMNCLH-HPKL 1450

Query: 489  INLHEVYETPSEMILVLEYAAGGEIFDQCVADREEAFTEKDVQRLMRQILEGVRFLHAHD 668
            +   + +E  + +++VLE  +GGE+F++ + D +   TE++  + MRQI  GV ++H   
Sbjct: 1451 VQCVDAFEEKANIVMVLEIVSGGELFERII-DEDFELTERECIQYMRQISAGVEYIHRQG 1509

Query: 669  VVHLDLKPQNILLTSESPLGDIKIVDFGLSRIMKKSEELREIMGTPEYVAPEILSYDPIS 848
            +VHLDLKP+NI+  +++    IK++DFGL+R ++ +  L+ + GTPE+VAPE+++Y+PI 
Sbjct: 1510 IVHLDLKPENIMCVNKTGTR-IKLIDFGLARKLENAGSLKVLFGTPEFVAPEVINYEPIG 1568

Query: 849  MATDMWSIGVLTYVMLTGVSPFLGDSKQETFLNISRMNLNYSEEEFDVVSESAVDFIKAL 1028
             ATDMWSIGV+ Y++++G+SPF+GD+  ET  N++    ++ +E FD +S+ A DFI  L
Sbjct: 1569 YATDMWSIGVICYILVSGLSPFMGDNDNETLANVTSATWDFDDEAFDEISDDAKDFISNL 1628

Query: 1029 LVKEPEDRATAEECLKHPWLAQGSAQEPSCKL 1124
            L K+ ++R    +CL+HPWL + +    + KL
Sbjct: 1629 LKKDMKNRLDCTQCLQHPWLMKDTKNMEAKKL 1660


>ref|XP_857720.1| PREDICTED: similar to myosin light chain kinase isoform 1 isoform 3
            [Canis familiaris].
          Length = 1870

 Score =  206 bits (525), Expect = 4e-53
 Identities = 102/272 (37%), Positives = 177/272 (65%)
 Frame = +3

Query: 309  SPGRELGRGKFAVVRKCIKKDSGREFAAKFMRKRRKGQDCRMEIIHEIAVLELAQDNPWV 488
            S GR +G GKF  V + ++K +G+ +A KF +     +  +  I  EI+++     +P +
Sbjct: 1464 SRGR-VGLGKFGQVFRLVEKKTGKIWAGKFFKAYSAKE--KENIRQEISIMNCLH-HPKL 1519

Query: 489  INLHEVYETPSEMILVLEYAAGGEIFDQCVADREEAFTEKDVQRLMRQILEGVRFLHAHD 668
            +   + +E  + +++VLE  +GGE+F++ + D +   TE++  + MRQI  GV ++H   
Sbjct: 1520 VQCVDAFEEKANIVMVLEIVSGGELFERII-DEDFELTERECIQYMRQISAGVEYIHRQG 1578

Query: 669  VVHLDLKPQNILLTSESPLGDIKIVDFGLSRIMKKSEELREIMGTPEYVAPEILSYDPIS 848
            +VHLDLKP+NI+  +++    IK++DFGL+R ++ +  L+ + GTPE+VAPE+++Y+PI 
Sbjct: 1579 IVHLDLKPENIMCVNKTGTR-IKLIDFGLARKLENAGSLKVLFGTPEFVAPEVINYEPIG 1637

Query: 849  MATDMWSIGVLTYVMLTGVSPFLGDSKQETFLNISRMNLNYSEEEFDVVSESAVDFIKAL 1028
             ATDMWSIGV+ Y++++G+SPF+GD+  ET  N++    ++ +E FD +S+ A DFI  L
Sbjct: 1638 YATDMWSIGVICYILVSGLSPFMGDNDNETLANVTSATWDFDDEAFDEISDDAKDFISNL 1697

Query: 1029 LVKEPEDRATAEECLKHPWLAQGSAQEPSCKL 1124
            L K+ ++R    +CL+HPWL + +    + KL
Sbjct: 1698 LKKDMKNRLDCTQCLQHPWLMKDTKNMEAKKL 1729


  Database: RefSeq49_CP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 18,874,504
  Number of sequences in database:  33,336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33336
Number of Hits to DB: 53,866,575
Number of extensions: 1253231
Number of successful extensions: 7575
Number of sequences better than 1.0e-05: 865
Number of HSP's gapped: 5786
Number of HSP's successfully gapped: 899
Length of query: 529
Length of database: 18,874,504
Length adjustment: 107
Effective length of query: 422
Effective length of database: 15,307,552
Effective search space: 6459786944
Effective search space used: 6459786944
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-012848
         (1588 letters)

Database: RefSeq49_SP.fasta 
           24,897 sequences; 11,343,932 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|XP_003361146.1| PREDICTED: serine/threonine-protein kinase 1...   401   e-112
Alignment   gi|XP_001928316.3| PREDICTED: serine/threonine-protein kinase 1...   365   e-101
Alignment   gi|XP_003133606.2| PREDICTED: serine/threonine-protein kinase 1...   363   e-100
Alignment   gi|XP_003130683.2| PREDICTED: death-associated protein kinase 1...   256   2e-68
Alignment   gi|NP_001230492.1| death-associated protein kinase 2 [Sus scrof...   256   2e-68
Alignment   gi|XP_003354051.1| PREDICTED: LOW QUALITY PROTEIN: death-associ...   251   8e-67
Alignment   gi|XP_001924656.2| PREDICTED: hypothetical protein LOC100157526...   214   8e-56
Alignment   gi|XP_003134431.2| PREDICTED: LOW QUALITY PROTEIN: myosin light...   213   2e-55
Alignment   gi|XP_003359774.1| PREDICTED: triple functional domain protein-...   204   9e-53
Alignment   gi|XP_003359621.1| PREDICTED: titin-like [Sus scrofa].               199   4e-51

>ref|XP_003361146.1| PREDICTED: serine/threonine-protein kinase 17A-like [Sus scrofa].
          Length = 248

 Score =  401 bits (1030), Expect = e-112
 Identities = 206/229 (89%), Positives = 206/229 (89%)
 Frame = +3

Query: 681  DLKPQNILLTSESPLGDIKIVDFGLSRIMKKSEELREIMGTPEYVAPEILSYDPISMATD 860
            D  PQNILLTSESPLGDIKIVDFGLSR       LREIMGTPEYVAPEILSYDPISMATD
Sbjct: 20   DTTPQNILLTSESPLGDIKIVDFGLSRXXXXXXXLREIMGTPEYVAPEILSYDPISMATD 79

Query: 861  MWSIGVLTYVMLTGVSPFLGDSKQETFLNISRMNLNYSEEEFDVVSESAVDFIKALLVKE 1040
            MWSIGVLTYVMLTGVSPFLGDSKQETFLNISRMNLNYSEEEFDVVSESAVDFIKALLVKE
Sbjct: 80   MWSIGVLTYVMLTGVSPFLGDSKQETFLNISRMNLNYSEEEFDVVSESAVDFIKALLVKE 139

Query: 1041 PEDRATAEECLKHPWLAQGSAQEPSCKLKGAPEEAQALQEGDSVPESNSDXXXXXXXXXX 1220
            PEDRATAEECLKHPWLAQGSAQEPSCKLKGAPEEAQALQEGDSVPESNSD          
Sbjct: 140  PEDRATAEECLKHPWLAQGSAQEPSCKLKGAPEEAQALQEGDSVPESNSDPQTPETQEPV 199

Query: 1221 XXXXLIVVTSYTLGQCRQSEKEKMEQKAISKRFKFEEPLLQEIPGDFIY 1367
                LIVVTSYTLGQCRQSEKEKMEQKAISKRFKFEEPLLQEIPGDFIY
Sbjct: 200  LTEELIVVTSYTLGQCRQSEKEKMEQKAISKRFKFEEPLLQEIPGDFIY 248


>ref|XP_001928316.3| PREDICTED: serine/threonine-protein kinase 17B [Sus scrofa].
          Length = 372

 Score =  365 bits (936), Expect = e-101
 Identities = 196/367 (53%), Positives = 256/367 (69%), Gaps = 6/367 (1%)
 Frame = +3

Query: 255  TEIRTAVRTEPFQDSYSLSPGRELGRGKFAVVRKCIKKDSGREFAAKFMRKRRKGQDCRM 434
            T  +T ++ + F + Y+L+  +ELGRGKFAVVR+CI K +G+E+AAKF++KRR+GQDCR 
Sbjct: 17   TTPQTPMKMDNFNNFYTLT-SKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRA 75

Query: 435  EIIHEIAVLELAQDNPWVINLHEVYETPSEMILVLEYAAGGEIFDQCVADREEAFTEKDV 614
            EI+HEIAVLELA+  P VINLHEVYE  SE+ILVLEYAAGGEIF+ C+ +  E  +E D+
Sbjct: 76   EILHEIAVLELAKSCPHVINLHEVYENASEIILVLEYAAGGEIFNLCLPELAEMVSENDI 135

Query: 615  QRLMRQILEGVRFLHAHDVVHLDLKPQNILLTSESPLGDIKIVDFGLSRIMKKSEELREI 794
             RL++QILEGV +LH +++VHLDLKPQNILL+S  PLGDIKIVDFG+SR +  + ELREI
Sbjct: 136  IRLIKQILEGVYYLHQNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGNACELREI 195

Query: 795  MGTPEYVAPEILSYDPISMATDMWSIGVLTYVMLTGVSPFLGDSKQETFLNISRMNLNYS 974
            MGTPEY+APEIL+YDPI+ ATDMW++GV+ Y++LT  SPF+G+  QET+LNIS++N++YS
Sbjct: 196  MGTPEYLAPEILNYDPITTATDMWNVGVIAYMLLTHTSPFVGEDNQETYLNISQVNVDYS 255

Query: 975  EEEFDVVSESAVDFIKALLVKEPEDRATAEECLKHPWLAQ---GSAQEPSCKLKGAPEEA 1145
            EE F  VS+ A DFI+ LLVK PE R TAE CL H WL Q   G+   P        E +
Sbjct: 256  EETFSSVSQLATDFIQRLLVKNPEKRPTAEICLSHSWLQQWDFGNLFHPE-------ETS 308

Query: 1146 QALQEGDSVPESNSDXXXXXXXXXXXXXXLIVVTSYTLGQCRQSE-KEKM--EQKAISKR 1316
             + Q  D    S+ D                       G C   E KE +  +   +SKR
Sbjct: 309  SSSQSQDHTIRSSEDKTSKPSCN---------------GTCSDREDKENIPEDSSMVSKR 353

Query: 1317 FKFEEPL 1337
            F+F++ L
Sbjct: 354  FRFDDSL 360


>ref|XP_003133606.2| PREDICTED: serine/threonine-protein kinase 17B-like [Sus scrofa].
          Length = 372

 Score =  363 bits (933), Expect = e-100
 Identities = 195/367 (53%), Positives = 256/367 (69%), Gaps = 6/367 (1%)
 Frame = +3

Query: 255  TEIRTAVRTEPFQDSYSLSPGRELGRGKFAVVRKCIKKDSGREFAAKFMRKRRKGQDCRM 434
            T  +T ++ + F + Y+L+  +ELGRGKFAVVR+CI K +G+E+AAKF++KRR+GQDCR 
Sbjct: 17   TTPQTPMKMDNFNNFYTLT-SKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRA 75

Query: 435  EIIHEIAVLELAQDNPWVINLHEVYETPSEMILVLEYAAGGEIFDQCVADREEAFTEKDV 614
            EI+HEIAVLELA+  P VINLHEVYE  SE+ILVLEYAAGGEIF+ C+ +  E  +E D+
Sbjct: 76   EILHEIAVLELAKSCPHVINLHEVYENASEIILVLEYAAGGEIFNLCLPELAEMVSENDI 135

Query: 615  QRLMRQILEGVRFLHAHDVVHLDLKPQNILLTSESPLGDIKIVDFGLSRIMKKSEELREI 794
             RL++QILEGV +LH +++VHLDLKPQNILL+S  PLGDIKIVDFG+SR +  + ELREI
Sbjct: 136  IRLIKQILEGVYYLHQNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGNACELREI 195

Query: 795  MGTPEYVAPEILSYDPISMATDMWSIGVLTYVMLTGVSPFLGDSKQETFLNISRMNLNYS 974
            MGTPEY+APEIL+YDPI+ ATDMW++GV+ Y++LT  SPF+G+  QET+LNIS++N++YS
Sbjct: 196  MGTPEYLAPEILNYDPITTATDMWNVGVIAYMLLTHTSPFVGEDNQETYLNISQVNVDYS 255

Query: 975  EEEFDVVSESAVDFIKALLVKEPEDRATAEECLKHPWLAQ---GSAQEPSCKLKGAPEEA 1145
            EE F  VS+ A DFI+ LLV+ PE R TAE CL H WL Q   G+   P        E +
Sbjct: 256  EETFSSVSQLATDFIQRLLVRNPEKRPTAEICLSHSWLQQWDFGNLFHPE-------ETS 308

Query: 1146 QALQEGDSVPESNSDXXXXXXXXXXXXXXLIVVTSYTLGQCRQSE-KEKM--EQKAISKR 1316
             + Q  D    S+ D                       G C   E KE +  +   +SKR
Sbjct: 309  SSSQSQDHTIRSSEDKTSKPSCN---------------GTCSDREDKENIPEDSSMVSKR 353

Query: 1317 FKFEEPL 1337
            F+F++ L
Sbjct: 354  FRFDDSL 360


>ref|XP_003130683.2| PREDICTED: death-associated protein kinase 1-like [Sus scrofa].
          Length = 850

 Score =  256 bits (655), Expect = 2e-68
 Identities = 132/286 (46%), Positives = 188/286 (65%), Gaps = 5/286 (1%)
 Frame = +3

Query: 267  TAVRTEPFQDSYSLSPGRELGRGKFAVVRKCIKKDSGREFAAKFMRKRRKGQD----CRM 434
            T  R E   D Y    G ELG G+FAVV+KC +K +G ++AAKF++KRR         R 
Sbjct: 2    TVFRQENVDDYYDT--GEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSRE 59

Query: 435  EIIHEIAVLELAQDNPWVINLHEVYETPSEMILVLEYAAGGEIFDQCVADREEAFTEKDV 614
            +I  E+ +L+  Q +P VI LHEVYE  +++IL+LE  AGGE+FD      +E+ TE++ 
Sbjct: 60   DIEREVGILKEIQ-HPNVITLHEVYENKTDVILILELVAGGELFDFLA--EKESLTEEEA 116

Query: 615  QRLMRQILEGVRFLHAHDVVHLDLKPQNILLTSES-PLGDIKIVDFGLSRIMKKSEELRE 791
               ++QIL GV +LH+  + H DLKP+NI+L   + P   IKI+DFGL+  +    E + 
Sbjct: 117  TEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN 176

Query: 792  IMGTPEYVAPEILSYDPISMATDMWSIGVLTYVMLTGVSPFLGDSKQETFLNISRMNLNY 971
            I GTPE+VAPEI++Y+P+ +  DMWSIGV+TY++L+G SPFLGD+KQET  N+S +N  +
Sbjct: 177  IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEF 236

Query: 972  SEEEFDVVSESAVDFIKALLVKEPEDRATAEECLKHPWLAQGSAQE 1109
             EE F   S  A DFI+ LLVK+P+ R T ++ L+HPW+     Q+
Sbjct: 237  EEEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQQ 282


>ref|NP_001230492.1| death-associated protein kinase 2 [Sus scrofa].
          Length = 365

 Score =  256 bits (654), Expect = 2e-68
 Identities = 125/283 (44%), Positives = 193/283 (68%), Gaps = 5/283 (1%)
 Frame = +3

Query: 276  RTEPFQDSYSLSPGRELGRGKFAVVRKCIKKDSGREFAAKFMRKRRKGQD----CRMEII 443
            + +  +D Y +  G ELG G+FA+V+KC +K +G E+AAKF++KR+        CR EI 
Sbjct: 10   KQQKVEDFYDI--GEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIE 67

Query: 444  HEIAVLELAQDNPWVINLHEVYETPSEMILVLEYAAGGEIFDQCVADREEAFTEKDVQRL 623
             E+ +L     +P VI LH+V+E  ++++L+LE  +GGE+FD     ++E+ +E++    
Sbjct: 68   REVGILRQVL-HPNVITLHDVFENRTDVVLILELVSGGELFDFLA--QKESLSEEEATSF 124

Query: 624  MRQILEGVRFLHAHDVVHLDLKPQNILLTSES-PLGDIKIVDFGLSRIMKKSEELREIMG 800
            ++QIL+GV +LHA  + H DLKP+NI+L  ++ P+  IK++DFGL+  ++   E + I G
Sbjct: 125  IKQILDGVNYLHAKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFG 184

Query: 801  TPEYVAPEILSYDPISMATDMWSIGVLTYVMLTGVSPFLGDSKQETFLNISRMNLNYSEE 980
            TPE+VAPEI++Y+P+ +  DMW IGV+TY++L+G SPFLGD+KQET  NI+ ++ N+ EE
Sbjct: 185  TPEFVAPEIVNYEPLGLEADMWGIGVITYILLSGASPFLGDTKQETLANITAVSYNFDEE 244

Query: 981  EFDVVSESAVDFIKALLVKEPEDRATAEECLKHPWLAQGSAQE 1109
             F   SE A DFI+ LLVKE   R T +E L+HPW+    +Q+
Sbjct: 245  FFSQTSELAKDFIRKLLVKETRKRLTIQEALRHPWITPVDSQQ 287


>ref|XP_003354051.1| PREDICTED: LOW QUALITY PROTEIN: death-associated protein kinase
            3-like [Sus scrofa].
          Length = 454

 Score =  251 bits (641), Expect = 8e-67
 Identities = 123/276 (44%), Positives = 190/276 (68%), Gaps = 5/276 (1%)
 Frame = +3

Query: 276  RTEPFQDSYSLSPGRELGRGKFAVVRKCIKKDSGREFAAKFMRKRRKGQD----CRMEII 443
            R E  +D Y +  G ELG G+FA+VRKC +K +G+E+AAKF++KRR         R EI 
Sbjct: 5    RQENVEDHYEM--GEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIE 62

Query: 444  HEIAVLELAQDNPWVINLHEVYETPSEMILVLEYAAGGEIFDQCVADREEAFTEKDVQRL 623
             E+ +L   + +P +I LH+++E  ++++L+LE  +GGE+FD      +E+ TE +  + 
Sbjct: 63   REVNILREIR-HPNIITLHDIFENKTDVVLILELVSGGELFDFLA--EKESLTEDEATQF 119

Query: 624  MRQILEGVRFLHAHDVVHLDLKPQNILLTSES-PLGDIKIVDFGLSRIMKKSEELREIMG 800
            ++QIL+GV +LH+  + H DLKP+NI+L  ++ P   IK++DFG++  ++   E + I G
Sbjct: 120  LKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFG 179

Query: 801  TPEYVAPEILSYDPISMATDMWSIGVLTYVMLTGVSPFLGDSKQETFLNISRMNLNYSEE 980
            TPE+VAPEI++Y+P+ +  DMWSIGV+TY++L+G SPFLG++KQET  NIS +N ++ EE
Sbjct: 180  TPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEE 239

Query: 981  EFDVVSESAVDFIKALLVKEPEDRATAEECLKHPWL 1088
             F   SE A DFI+ LLVK+P+ R T  + L+H W+
Sbjct: 240  YFSNTSELAKDFIRRLLVKDPKRRMTIAQSLEHSWI 275


>ref|XP_001924656.2| PREDICTED: hypothetical protein LOC100157526 [Sus scrofa].
          Length = 639

 Score =  214 bits (546), Expect = 8e-56
 Identities = 126/301 (41%), Positives = 184/301 (61%), Gaps = 6/301 (1%)
 Frame = +3

Query: 300  YSLSPGRELGRGKFAVVRKCIKKDSGREFAAKFMRKRRKGQDCRMEIIHEIAVLELAQDN 479
            Y++S    LG G+F  V KC +K +G + AAK ++ R  G   + E  +EI V+    D+
Sbjct: 213  YTVSRTEILGGGRFGQVHKCEEKATGLKLAAKIIKTR--GAKDKDEAKNEINVMNQL-DH 269

Query: 480  PWVINLHEVYETPSEMILVLEYAAGGEIFDQCVADREEAFTEKDVQRLMRQILEGVRFLH 659
              +I L++ +E+  +++LVLEY  GGE FD+ + D   + TE D    +RQI EG+R +H
Sbjct: 270  VNLIQLYDAFESKHDIVLVLEYVDGGEPFDRIIDDNC-SLTELDTILFIRQICEGIRHMH 328

Query: 660  AHDVVHLDLKPQNILLTSESPLGDIKIVDFGLSRIMKKSEELREIMGTPEYVAPEILSYD 839
               V+HLDLKP+NIL  +      IKI+DFGL+R  K  E+L+   GTPE++APE+++YD
Sbjct: 329  QMYVLHLDLKPENILCVNRDTK-QIKIIDFGLARRYKPREKLKVNFGTPEFLAPEVVNYD 387

Query: 840  PISMATDMWSIGVLTYVMLTGVSPFLGDSKQETFLNISRMNLNYSEEEFDVVSESAVDFI 1019
             +S  TDMWS+GV+TY++L+G+SPFLGD+  ET  NI     +  + EF  VSE A +FI
Sbjct: 388  FVSFPTDMWSVGVITYMLLSGLSPFLGDTDAETLNNILACRWDLEDAEFQDVSEEAREFI 447

Query: 1020 KALLVKEPEDRATAEECLKHPWLAQG------SAQEPSCKLKGAPEEAQALQEGDSVPES 1181
              LL+KE   R +A + LKHPWL+        SAQ    KL   P+  +  +E D +  S
Sbjct: 448  SKLLIKEKSWRISASKALKHPWLSDHQLHSRLSAQGSPVKLD--PQSEEPKREWDEISAS 505

Query: 1182 N 1184
            +
Sbjct: 506  S 506


>ref|XP_003134431.2| PREDICTED: LOW QUALITY PROTEIN: myosin light chain kinase 2,
            skeletal/cardiac muscle [Sus scrofa].
          Length = 591

 Score =  213 bits (543), Expect = 2e-55
 Identities = 114/282 (40%), Positives = 174/282 (61%)
 Frame = +3

Query: 273  VRTEPFQDSYSLSPGRELGRGKFAVVRKCIKKDSGREFAAKFMRKRRKGQDCRMEIIHEI 452
            +R+      +SL+    LG GKF  V  C +K +G + AAK ++K+   +D  M ++   
Sbjct: 269  LRSGNVNSQFSLNSKEALGGGKFGAVCTCTEKATGLKLAAKVIKKQTP-KDKEMVLLEIE 327

Query: 453  AVLELAQDNPWVINLHEVYETPSEMILVLEYAAGGEIFDQCVADREEAFTEKDVQRLMRQ 632
             + +L   N  +I L+   ETP E++L +EY  GGE+F++ V D +   TE D    +RQ
Sbjct: 328  VMNQLNHRN--LIQLYAAIETPHEIVLFMEYIEGGELFERIV-DEDYHLTEVDTMVFVRQ 384

Query: 633  ILEGVRFLHAHDVVHLDLKPQNILLTSESPLGDIKIVDFGLSRIMKKSEELREIMGTPEY 812
            I +G+ F+H   V+HLDLKP+NIL  + +    +KI+DFGL+R     E+L+   GTPE+
Sbjct: 385  ICDGILFMHKMRVLHLDLKPENILCVNTTG-HLVKIIDFGLARRYNPREKLKVNFGTPEF 443

Query: 813  VAPEILSYDPISMATDMWSIGVLTYVMLTGVSPFLGDSKQETFLNISRMNLNYSEEEFDV 992
            ++PE+++YD IS  TDMWS+GV+TY++L+G+SPFLGD   ET  N+   N  + EE F+ 
Sbjct: 444  LSPEVVNYDQISDKTDMWSLGVITYMLLSGLSPFLGDDDTETLNNVLSGNWYFDEETFEA 503

Query: 993  VSESAVDFIKALLVKEPEDRATAEECLKHPWLAQGSAQEPSC 1118
            VS+ A DF+  L+VK+   R +A +CL HPWL   + +   C
Sbjct: 504  VSDEAKDFVSNLIVKDQRGRMSAAQCLAHPWLNNLAEKAKRC 545


>ref|XP_003359774.1| PREDICTED: triple functional domain protein-like, partial [Sus
            scrofa].
          Length = 1768

 Score =  204 bits (520), Expect = 9e-53
 Identities = 108/259 (41%), Positives = 167/259 (64%)
 Frame = +3

Query: 321  ELGRGKFAVVRKCIKKDSGREFAAKFMRKRRKGQDCRMEIIHEIAVLELAQDNPWVINLH 500
            ELGRG+F+VV+KC +K + R  A KF+ K+   +D   ++ HE+ +L+  Q +P +I L 
Sbjct: 1468 ELGRGRFSVVKKCDQKGTKRAVATKFVNKKLMKRD---QVTHELGILQNLQ-HPLLIGLL 1523

Query: 501  EVYETPSEMILVLEYAAGGEIFDQCVADREEAFTEKDVQRLMRQILEGVRFLHAHDVVHL 680
            + +ETP+  +LVLE A  G + D CV  R    TE  ++  + ++LEGVR+LH   + HL
Sbjct: 1524 DTFETPTSYVLVLEMADQGRLLD-CVV-RWGNLTEGKIRAYLGEVLEGVRYLHNCRIAHL 1581

Query: 681  DLKPQNILLTSESPLGDIKIVDFGLSRIMKKSEELREIMGTPEYVAPEILSYDPISMATD 860
            DLKP+NIL+   S    IK+ DFG +  +  +  + +++G PE+ APEI+  +P+S+ +D
Sbjct: 1582 DLKPENILVDQSSAKPTIKLADFGDAVQLNTTYHIHQLLGNPEFAAPEIILGNPVSLTSD 1641

Query: 861  MWSIGVLTYVMLTGVSPFLGDSKQETFLNISRMNLNYSEEEFDVVSESAVDFIKALLVKE 1040
             WS+GVL YV+L+GVSPFL DS +ET LNI R++ ++ ++ F  VS+ A DF+  LL ++
Sbjct: 1642 TWSVGVLAYVLLSGVSPFLDDSVEETCLNICRLDFSFPDDYFQGVSQRAKDFVCFLLHED 1701

Query: 1041 PEDRATAEECLKHPWLAQG 1097
            P  R +A   L+  WL  G
Sbjct: 1702 PAKRPSAALALQEQWLQAG 1720


>ref|XP_003359621.1| PREDICTED: titin-like [Sus scrofa].
          Length = 5286

 Score =  199 bits (506), Expect = 4e-51
 Identities = 99/272 (36%), Positives = 170/272 (62%)
 Frame = +3

Query: 279  TEPFQDSYSLSPGRELGRGKFAVVRKCIKKDSGREFAAKFMRKRRKGQDCRMEIIHEIAV 458
            T+   + Y ++   +LGRG+F +V +C++  S + + AKF++   KG D ++ +  EI++
Sbjct: 2937 TKELYEKYMIA--EDLGRGQFGIVHRCVETSSKKTYMAKFVKV--KGAD-QVLVKKEISI 2991

Query: 459  LELAQDNPWVINLHEVYETPSEMILVLEYAAGGEIFDQCVADREEAFTEKDVQRLMRQIL 638
            L +A+    ++ LHE +E+  E++++ E+ +G +IF++      E   E+++   +RQ+ 
Sbjct: 2992 LNIARHRN-ILYLHESFESMEELVMIFEFISGLDIFERINTSAFE-LNEREIVSYVRQVC 3049

Query: 639  EGVRFLHAHDVVHLDLKPQNILLTSESPLGDIKIVDFGLSRIMKKSEELREIMGTPEYVA 818
            E + FLH+H++ H D++P+NI+  +      IKI++FG +R +K  +  R +   PEY A
Sbjct: 3050 EALEFLHSHNIGHFDIRPENIIYQTRRS-STIKIIEFGQARQLKPGDNFRLLFTAPEYYA 3108

Query: 819  PEILSYDPISMATDMWSIGVLTYVMLTGVSPFLGDSKQETFLNISRMNLNYSEEEFDVVS 998
            PE+  +D +S ATDMWS+G L YV+L+G++PFL ++ Q+   NI      + EE F  +S
Sbjct: 3109 PEVHQHDVVSTATDMWSLGTLVYVLLSGMNPFLAETNQQIIENIMNAEYTFDEEAFKEIS 3168

Query: 999  ESAVDFIKALLVKEPEDRATAEECLKHPWLAQ 1094
              A+DF+  LLVKE + R TA E L+HPWL Q
Sbjct: 3169 LEAMDFVDRLLVKERKSRMTASEALRHPWLKQ 3200


  Database: RefSeq49_SP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 11,343,932
  Number of sequences in database:  24,897
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 24897
Number of Hits to DB: 34,016,525
Number of extensions: 929591
Number of successful extensions: 4220
Number of sequences better than 1.0e-05: 408
Number of HSP's gapped: 3463
Number of HSP's successfully gapped: 427
Length of query: 529
Length of database: 11,343,932
Length adjustment: 104
Effective length of query: 425
Effective length of database: 8,754,644
Effective search space: 3720723700
Effective search space used: 3720723700
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-012848
         (1588 letters)

Database: RefSeq49_MP.fasta 
           30,036 sequences; 15,617,559 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_598571.2| serine/threonine-protein kinase 17B [Mus muscul...   371   e-102
Alignment   gi|NP_034149.2| death-associated protein kinase 2 [Mus musculus].    255   6e-68
Alignment   gi|NP_598823.1| death-associated protein kinase 1 [Mus musculus].    254   1e-67
Alignment   gi|NP_083929.2| death-associated protein kinase 1 [Mus musculus].    254   1e-67
Alignment   gi|NP_001177403.1| death-associated protein kinase 3 [Mus muscu...   253   2e-67
Alignment   gi|NP_001177402.1| death-associated protein kinase 3 [Mus muscu...   253   2e-67
Alignment   gi|NP_031854.1| death-associated protein kinase 3 [Mus musculus].    253   2e-67
Alignment   gi|NP_001159502.1| myosin light chain kinase family member 4 [M...   223   3e-58
Alignment   gi|NP_001074513.2| myosin light chain kinase 2, skeletal/cardia...   213   3e-55
Alignment   gi|NP_780650.2| putative myosin light chain kinase 3 [Mus muscu...   212   8e-55

>ref|NP_598571.2| serine/threonine-protein kinase 17B [Mus musculus].
          Length = 372

 Score =  371 bits (952), Expect = e-102
 Identities = 189/333 (56%), Positives = 248/333 (74%), Gaps = 22/333 (6%)
 Frame = +3

Query: 255  TEIRTAVRTEPFQDSYSLSPGRELGRGKFAVVRKCIKKDSGREFAAKFMRKRRKGQDCRM 434
            T  +T ++TE F + Y+L+P +ELGRGKFAVVR+CI K +G+E+AAK ++KRR+GQDCR 
Sbjct: 17   TTPQTPIKTENFNNFYTLTP-KELGRGKFAVVRQCISKSTGQEYAAKSLKKRRRGQDCRA 75

Query: 435  EIIHEIAVLELAQDNPWVINLHEVYETPSEMILVLEYAAGGEIFDQCVADREEAFTEKDV 614
            EI+HEIAVLELA+  P VINLHEVYE  +E+ILVLEYAAGGEIF+ C+ +  E  +E DV
Sbjct: 76   EILHEIAVLELARSCPHVINLHEVYENATEIILVLEYAAGGEIFNLCLPELAEMVSENDV 135

Query: 615  QRLMRQILEGVRFLHAHDVVHLDLKPQNILLTSESPLGDIKIVDFGLSRIMKKSEELREI 794
             RL++QILEGV +LH +++VHLDLKPQNILL+S  PLGDIKIVDFG+SR +  + ELREI
Sbjct: 136  IRLIKQILEGVHYLHQNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGNASELREI 195

Query: 795  MGTPEYVAPEILSYDPISMATDMWSIGVLTYVMLTGVSPFLGDSKQETFLNISRMNLNYS 974
            MGTPEY+APEIL+YDPI+ ATDMW+IG++ Y++LT  SPF+G+  QET+LNIS++N++YS
Sbjct: 196  MGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQVNVDYS 255

Query: 975  EEEFDVVSESAVDFIKALLVKEPEDRATAEECLKHPWLAQ-------------GSAQEPS 1115
            EE F  VS+ A DFI++LLVK PE R TAE CL H WL Q             GS+Q   
Sbjct: 256  EEMFSSVSQLATDFIQSLLVKNPEKRPTAESCLSHSWLQQWDFGSLFHPEETSGSSQIQD 315

Query: 1116 CKLKGAPEEAQ---------ALQEGDSVPESNS 1187
              L+ + E+           A ++ +++PE  S
Sbjct: 316  LTLRSSEEKTSKSSCNGSCGAREDKENIPEDGS 348


>ref|NP_034149.2| death-associated protein kinase 2 [Mus musculus].
          Length = 370

 Score =  255 bits (652), Expect = 6e-68
 Identities = 124/283 (43%), Positives = 193/283 (68%), Gaps = 5/283 (1%)
 Frame = +3

Query: 276  RTEPFQDSYSLSPGRELGRGKFAVVRKCIKKDSGREFAAKFMRKRRKGQD----CRMEII 443
            + +  +D Y +  G ELG G+FA+V+KC +K +G E+AAKF++KR+        CR EI 
Sbjct: 15   KQQKVEDFYDI--GEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIE 72

Query: 444  HEIAVLELAQDNPWVINLHEVYETPSEMILVLEYAAGGEIFDQCVADREEAFTEKDVQRL 623
             E+++L     +P +I LH+VYE  ++++L+LE  +GGE+FD     ++E+ +E++    
Sbjct: 73   REVSILRQVL-HPNIITLHDVYENRTDVVLILELVSGGELFDFLA--QKESLSEEEATSF 129

Query: 624  MRQILEGVRFLHAHDVVHLDLKPQNILLTSES-PLGDIKIVDFGLSRIMKKSEELREIMG 800
            ++QIL+GV +LH   + H DLKP+NI+L  ++ P+  IK++DFGL+  ++   E + I G
Sbjct: 130  IKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFG 189

Query: 801  TPEYVAPEILSYDPISMATDMWSIGVLTYVMLTGVSPFLGDSKQETFLNISRMNLNYSEE 980
            TPE+VAPEI++Y+P+ +  DMWSIGV+TY++L+G SPFLGD+KQET  NI+ ++ ++ EE
Sbjct: 190  TPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEE 249

Query: 981  EFDVVSESAVDFIKALLVKEPEDRATAEECLKHPWLAQGSAQE 1109
             F   SE A DFI+ LLVKE   R T +E L+HPW+     Q+
Sbjct: 250  FFSQTSELAKDFIRKLLVKETRKRLTIQEALRHPWITPVDTQQ 292


>ref|NP_598823.1| death-associated protein kinase 1 [Mus musculus].
          Length = 1430

 Score =  254 bits (650), Expect = 1e-67
 Identities = 131/286 (45%), Positives = 190/286 (66%), Gaps = 5/286 (1%)
 Frame = +3

Query: 267  TAVRTEPFQDSYSLSPGRELGRGKFAVVRKCIKKDSGREFAAKFMRKRRKGQD----CRM 434
            T  R E   D Y    G ELG G+FAVV+KC +K +G ++AAKF++KRR         R 
Sbjct: 2    TVFRQENVDDYYDT--GEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSRE 59

Query: 435  EIIHEIAVLELAQDNPWVINLHEVYETPSEMILVLEYAAGGEIFDQCVADREEAFTEKDV 614
            +I  E+++L+  + +P VI LHEVYE  +++IL+LE  AGGE+FD      +E+ TE++ 
Sbjct: 60   DIEREVSILKEIR-HPNVITLHEVYENKTDVILILELVAGGELFDFLA--EKESLTEEEA 116

Query: 615  QRLMRQILEGVRFLHAHDVVHLDLKPQNILLTSES-PLGDIKIVDFGLSRIMKKSEELRE 791
               ++QIL GV +LH+  + H DLKP+NI+L   + P   IKI+DFGL+  +    E + 
Sbjct: 117  TEFLKQILSGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN 176

Query: 792  IMGTPEYVAPEILSYDPISMATDMWSIGVLTYVMLTGVSPFLGDSKQETFLNISRMNLNY 971
            I GTPE+VAPEI++Y+P+ +  DMWSIGV+TY++L+G SPFLGD+KQET  N+S +N ++
Sbjct: 177  IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYDF 236

Query: 972  SEEEFDVVSESAVDFIKALLVKEPEDRATAEECLKHPWLAQGSAQE 1109
             EE F   S  A DFI+ LLVK+P+ R T ++ L+HPW+     Q+
Sbjct: 237  EEEFFRNTSTLAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQQ 282


>ref|NP_083929.2| death-associated protein kinase 1 [Mus musculus].
          Length = 1430

 Score =  254 bits (650), Expect = 1e-67
 Identities = 131/286 (45%), Positives = 190/286 (66%), Gaps = 5/286 (1%)
 Frame = +3

Query: 267  TAVRTEPFQDSYSLSPGRELGRGKFAVVRKCIKKDSGREFAAKFMRKRRKGQD----CRM 434
            T  R E   D Y    G ELG G+FAVV+KC +K +G ++AAKF++KRR         R 
Sbjct: 2    TVFRQENVDDYYDT--GEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSRE 59

Query: 435  EIIHEIAVLELAQDNPWVINLHEVYETPSEMILVLEYAAGGEIFDQCVADREEAFTEKDV 614
            +I  E+++L+  + +P VI LHEVYE  +++IL+LE  AGGE+FD      +E+ TE++ 
Sbjct: 60   DIEREVSILKEIR-HPNVITLHEVYENKTDVILILELVAGGELFDFLA--EKESLTEEEA 116

Query: 615  QRLMRQILEGVRFLHAHDVVHLDLKPQNILLTSES-PLGDIKIVDFGLSRIMKKSEELRE 791
               ++QIL GV +LH+  + H DLKP+NI+L   + P   IKI+DFGL+  +    E + 
Sbjct: 117  TEFLKQILSGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN 176

Query: 792  IMGTPEYVAPEILSYDPISMATDMWSIGVLTYVMLTGVSPFLGDSKQETFLNISRMNLNY 971
            I GTPE+VAPEI++Y+P+ +  DMWSIGV+TY++L+G SPFLGD+KQET  N+S +N ++
Sbjct: 177  IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYDF 236

Query: 972  SEEEFDVVSESAVDFIKALLVKEPEDRATAEECLKHPWLAQGSAQE 1109
             EE F   S  A DFI+ LLVK+P+ R T ++ L+HPW+     Q+
Sbjct: 237  EEEFFRNTSTLAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQQ 282


>ref|NP_001177403.1| death-associated protein kinase 3 [Mus musculus].
          Length = 448

 Score =  253 bits (647), Expect = 2e-67
 Identities = 130/314 (41%), Positives = 203/314 (64%), Gaps = 10/314 (3%)
 Frame = +3

Query: 276  RTEPFQDSYSLSPGRELGRGKFAVVRKCIKKDSGREFAAKFMRKRRKGQD----CRMEII 443
            R E  +D Y +  G ELG G+FA+VRKC +K +G E+AAKF++KRR         R EI 
Sbjct: 5    RQEDVEDHYEM--GEELGSGQFAIVRKCQQKGTGMEYAAKFIKKRRLPSSRRGVSREEIE 62

Query: 444  HEIAVLELAQDNPWVINLHEVYETPSEMILVLEYAAGGEIFDQCVADREEAFTEKDVQRL 623
             E+++L   + +P +I LH+V+E  ++++L+LE  +GGE+FD      +E+ TE +  + 
Sbjct: 63   REVSILREIR-HPNIITLHDVFENKTDVVLILELVSGGELFDFLA--EKESLTEDEATQF 119

Query: 624  MRQILEGVRFLHAHDVVHLDLKPQNILLTSESPLGD-IKIVDFGLSRIMKKSEELREIMG 800
            ++QIL+GV +LH+  + H DLKP+NI+L  +      IK++DFG++  ++   E + I G
Sbjct: 120  LKQILDGVHYLHSKRIAHFDLKPENIMLLDKHAASPRIKLIDFGIAHRIEAGSEFKNIFG 179

Query: 801  TPEYVAPEILSYDPISMATDMWSIGVLTYVMLTGVSPFLGDSKQETFLNISRMNLNYSEE 980
            TPE+VAPEI++Y+P+ +  DMWSIGV+TY++L+G SPFLG++KQET  NIS +N ++ EE
Sbjct: 180  TPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEE 239

Query: 981  EFDVVSESAVDFIKALLVKEPEDRATAEECLKHPWL-----AQGSAQEPSCKLKGAPEEA 1145
             F   SE A DFI+ LLVK+P+ R T  + L+H W+       G+ +    +L+ A    
Sbjct: 240  YFSSTSELAKDFIRRLLVKDPKRRMTIAQSLEHSWIKVRRREDGARKPERRRLRAARLRE 299

Query: 1146 QALQEGDSVPESNS 1187
             +L+   S+P + S
Sbjct: 300  YSLKSHSSMPRNTS 313


>ref|NP_001177402.1| death-associated protein kinase 3 [Mus musculus].
          Length = 448

 Score =  253 bits (647), Expect = 2e-67
 Identities = 130/314 (41%), Positives = 203/314 (64%), Gaps = 10/314 (3%)
 Frame = +3

Query: 276  RTEPFQDSYSLSPGRELGRGKFAVVRKCIKKDSGREFAAKFMRKRRKGQD----CRMEII 443
            R E  +D Y +  G ELG G+FA+VRKC +K +G E+AAKF++KRR         R EI 
Sbjct: 5    RQEDVEDHYEM--GEELGSGQFAIVRKCQQKGTGMEYAAKFIKKRRLPSSRRGVSREEIE 62

Query: 444  HEIAVLELAQDNPWVINLHEVYETPSEMILVLEYAAGGEIFDQCVADREEAFTEKDVQRL 623
             E+++L   + +P +I LH+V+E  ++++L+LE  +GGE+FD      +E+ TE +  + 
Sbjct: 63   REVSILREIR-HPNIITLHDVFENKTDVVLILELVSGGELFDFLA--EKESLTEDEATQF 119

Query: 624  MRQILEGVRFLHAHDVVHLDLKPQNILLTSESPLGD-IKIVDFGLSRIMKKSEELREIMG 800
            ++QIL+GV +LH+  + H DLKP+NI+L  +      IK++DFG++  ++   E + I G
Sbjct: 120  LKQILDGVHYLHSKRIAHFDLKPENIMLLDKHAASPRIKLIDFGIAHRIEAGSEFKNIFG 179

Query: 801  TPEYVAPEILSYDPISMATDMWSIGVLTYVMLTGVSPFLGDSKQETFLNISRMNLNYSEE 980
            TPE+VAPEI++Y+P+ +  DMWSIGV+TY++L+G SPFLG++KQET  NIS +N ++ EE
Sbjct: 180  TPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEE 239

Query: 981  EFDVVSESAVDFIKALLVKEPEDRATAEECLKHPWL-----AQGSAQEPSCKLKGAPEEA 1145
             F   SE A DFI+ LLVK+P+ R T  + L+H W+       G+ +    +L+ A    
Sbjct: 240  YFSSTSELAKDFIRRLLVKDPKRRMTIAQSLEHSWIKVRRREDGARKPERRRLRAARLRE 299

Query: 1146 QALQEGDSVPESNS 1187
             +L+   S+P + S
Sbjct: 300  YSLKSHSSMPRNTS 313


>ref|NP_031854.1| death-associated protein kinase 3 [Mus musculus].
          Length = 448

 Score =  253 bits (647), Expect = 2e-67
 Identities = 130/314 (41%), Positives = 203/314 (64%), Gaps = 10/314 (3%)
 Frame = +3

Query: 276  RTEPFQDSYSLSPGRELGRGKFAVVRKCIKKDSGREFAAKFMRKRRKGQD----CRMEII 443
            R E  +D Y +  G ELG G+FA+VRKC +K +G E+AAKF++KRR         R EI 
Sbjct: 5    RQEDVEDHYEM--GEELGSGQFAIVRKCQQKGTGMEYAAKFIKKRRLPSSRRGVSREEIE 62

Query: 444  HEIAVLELAQDNPWVINLHEVYETPSEMILVLEYAAGGEIFDQCVADREEAFTEKDVQRL 623
             E+++L   + +P +I LH+V+E  ++++L+LE  +GGE+FD      +E+ TE +  + 
Sbjct: 63   REVSILREIR-HPNIITLHDVFENKTDVVLILELVSGGELFDFLA--EKESLTEDEATQF 119

Query: 624  MRQILEGVRFLHAHDVVHLDLKPQNILLTSESPLGD-IKIVDFGLSRIMKKSEELREIMG 800
            ++QIL+GV +LH+  + H DLKP+NI+L  +      IK++DFG++  ++   E + I G
Sbjct: 120  LKQILDGVHYLHSKRIAHFDLKPENIMLLDKHAASPRIKLIDFGIAHRIEAGSEFKNIFG 179

Query: 801  TPEYVAPEILSYDPISMATDMWSIGVLTYVMLTGVSPFLGDSKQETFLNISRMNLNYSEE 980
            TPE+VAPEI++Y+P+ +  DMWSIGV+TY++L+G SPFLG++KQET  NIS +N ++ EE
Sbjct: 180  TPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEE 239

Query: 981  EFDVVSESAVDFIKALLVKEPEDRATAEECLKHPWL-----AQGSAQEPSCKLKGAPEEA 1145
             F   SE A DFI+ LLVK+P+ R T  + L+H W+       G+ +    +L+ A    
Sbjct: 240  YFSSTSELAKDFIRRLLVKDPKRRMTIAQSLEHSWIKVRRREDGARKPERRRLRAARLRE 299

Query: 1146 QALQEGDSVPESNS 1187
             +L+   S+P + S
Sbjct: 300  YSLKSHSSMPRNTS 313


>ref|NP_001159502.1| myosin light chain kinase family member 4 [Mus musculus].
          Length = 387

 Score =  223 bits (569), Expect = 3e-58
 Identities = 116/264 (43%), Positives = 175/264 (66%)
 Frame = +3

Query: 300  YSLSPGRELGRGKFAVVRKCIKKDSGREFAAKFMRKRRKGQDCRMEIIHEIAVLELAQDN 479
            Y++S    LG G+F  V KC +K +G + AAK ++ R  G   + ++ +EI+V+    D+
Sbjct: 105  YTVSKSEILGGGRFGQVHKCEEKATGLKLAAKIIKTR--GAKDKEDVKNEISVMNQL-DH 161

Query: 480  PWVINLHEVYETPSEMILVLEYAAGGEIFDQCVADREEAFTEKDVQRLMRQILEGVRFLH 659
              +I L++ +E+  ++ILV+EY  GGE+FD+ + D     TE D    M+QI EG+R++H
Sbjct: 162  VNLIQLYDAFESKHDIILVMEYVEGGELFDRII-DENCNLTELDTILFMKQICEGIRYMH 220

Query: 660  AHDVVHLDLKPQNILLTSESPLGDIKIVDFGLSRIMKKSEELREIMGTPEYVAPEILSYD 839
               ++HLDLKP+NIL  +      IKI+DFGL+R  K  E+L+   GTPE++APE+++YD
Sbjct: 221  QMYILHLDLKPENILCVNRDAK-QIKIIDFGLARRYKPREKLKVNFGTPEFLAPEVVNYD 279

Query: 840  PISMATDMWSIGVLTYVMLTGVSPFLGDSKQETFLNISRMNLNYSEEEFDVVSESAVDFI 1019
             +S +TDMWS+GV+TY++L+G+SPFLGD+  ET  NI     +  +EEF  +SE A +FI
Sbjct: 280  FVSFSTDMWSVGVITYMLLSGLSPFLGDNDAETLTNILACRWDLEDEEFQDISEEAKEFI 339

Query: 1020 KALLVKEPEDRATAEECLKHPWLA 1091
              LL+KE   R +A E LKHPWL+
Sbjct: 340  SKLLIKEKSWRISASEALKHPWLS 363


>ref|NP_001074513.2| myosin light chain kinase 2, skeletal/cardiac muscle [Mus musculus].
          Length = 613

 Score =  213 bits (542), Expect = 3e-55
 Identities = 114/282 (40%), Positives = 174/282 (61%)
 Frame = +3

Query: 273  VRTEPFQDSYSLSPGRELGRGKFAVVRKCIKKDSGREFAAKFMRKRRKGQDCRMEIIHEI 452
            +RT      +S++    LG GKF  V  C ++ +G + AAK ++K+   +D  M ++   
Sbjct: 291  LRTGNVNSEFSMNSKEALGGGKFGAVCTCTERATGLKLAAKVIKKQTP-KDKEMVLLEIE 349

Query: 453  AVLELAQDNPWVINLHEVYETPSEMILVLEYAAGGEIFDQCVADREEAFTEKDVQRLMRQ 632
             + +L   N  +I L+   ET  E+IL +EY  GGE+F++ V D +   TE D    +RQ
Sbjct: 350  VMNQLNHRN--LIQLYAAIETSHEIILFMEYIEGGELFERIV-DEDYHLTEVDTMVFVRQ 406

Query: 633  ILEGVRFLHAHDVVHLDLKPQNILLTSESPLGDIKIVDFGLSRIMKKSEELREIMGTPEY 812
            I +G+ F+H   V+HLDLKP+NIL  + +    +KI+DFGL+R    +E+L+   GTPE+
Sbjct: 407  ICDGILFMHKMRVLHLDLKPENILCVNTTG-HLVKIIDFGLARRYNPNEKLKVNFGTPEF 465

Query: 813  VAPEILSYDPISMATDMWSIGVLTYVMLTGVSPFLGDSKQETFLNISRMNLNYSEEEFDV 992
            ++PE+++YD IS  TDMWS+GV+TY++L+G+SPFLGD   ET  N+   N  + EE F+ 
Sbjct: 466  LSPEVVNYDQISDKTDMWSLGVITYMLLSGLSPFLGDDDTETLNNVLSANWYFDEETFEA 525

Query: 993  VSESAVDFIKALLVKEPEDRATAEECLKHPWLAQGSAQEPSC 1118
            VS+ A DF+  LL K+   R +AE+CL HPWL   + +   C
Sbjct: 526  VSDEAKDFVSNLLTKDQSARMSAEQCLAHPWLNNLAEKAKRC 567


>ref|NP_780650.2| putative myosin light chain kinase 3 [Mus musculus].
          Length = 795

 Score =  212 bits (539), Expect = 8e-55
 Identities = 111/265 (41%), Positives = 173/265 (65%), Gaps = 1/265 (0%)
 Frame = +3

Query: 300  YSLSPGRELGRGKFAVVRKCIKKDSGREFAAKFMRKRRKGQDCRMEIIHEIAVL-ELAQD 476
            Y++S    LG G+F  V +C ++ +G   AAK ++   K    R ++ +E+ ++ +L+  
Sbjct: 489  YTVSQHEVLGGGRFGQVHRCTERSTGLALAAKIIKV--KNVKDREDVKNEVNIMNQLSHV 546

Query: 477  NPWVINLHEVYETPSEMILVLEYAAGGEIFDQCVADREEAFTEKDVQRLMRQILEGVRFL 656
            N  +I L++ +E+ S   L++EY  GGE+FD+ + D +   TE DV    RQI EGV +L
Sbjct: 547  N--LIQLYDAFESKSSFTLIMEYVDGGELFDR-ITDEKYHLTELDVVLFTRQICEGVHYL 603

Query: 657  HAHDVVHLDLKPQNILLTSESPLGDIKIVDFGLSRIMKKSEELREIMGTPEYVAPEILSY 836
            H H ++HLDLKP+NIL  S++    IKI+DFGL+R  K  E+L+   GTPE++APE+++Y
Sbjct: 604  HQHYILHLDLKPENILCVSQTG-HQIKIIDFGLARRYKPREKLKVNFGTPEFLAPEVVNY 662

Query: 837  DPISMATDMWSIGVLTYVMLTGVSPFLGDSKQETFLNISRMNLNYSEEEFDVVSESAVDF 1016
            + +S  TDMWS+GV+TY++L+G+SPFLG++  ET   I   + ++  + F  +SE A DF
Sbjct: 663  EFVSFPTDMWSVGVITYMLLSGLSPFLGETDAETMNFIVNCSWDFDADTFKGLSEEAKDF 722

Query: 1017 IKALLVKEPEDRATAEECLKHPWLA 1091
            +  LLVKE   R +A +CLKH WL+
Sbjct: 723  VSRLLVKEKSCRMSATQCLKHEWLS 747


  Database: RefSeq49_MP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 15,617,559
  Number of sequences in database:  30,036
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 30036
Number of Hits to DB: 44,786,553
Number of extensions: 1034769
Number of successful extensions: 5656
Number of sequences better than 1.0e-05: 640
Number of HSP's gapped: 4271
Number of HSP's successfully gapped: 662
Length of query: 529
Length of database: 15,617,559
Length adjustment: 106
Effective length of query: 423
Effective length of database: 12,433,743
Effective search space: 5259473289
Effective search space used: 5259473289
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-012848
         (1588 letters)

Database: RefSeq49_HP.fasta 
           32,964 sequences; 18,297,164 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_004751.2| serine/threonine-protein kinase 17A [Homo sapie...   646   0.0  
Alignment   gi|NP_004217.1| serine/threonine-protein kinase 17B [Homo sapie...   365   e-101
Alignment   gi|NP_004929.2| death-associated protein kinase 1 [Homo sapiens].    256   5e-68
Alignment   gi|NP_001339.1| death-associated protein kinase 3 [Homo sapiens].    253   3e-67
Alignment   gi|NP_055141.2| death-associated protein kinase 2 [Homo sapiens].    249   4e-66
Alignment   gi|NP_001012418.2| myosin light chain kinase family member 4 [H...   218   1e-56
Alignment   gi|NP_149109.1| myosin light chain kinase 2, skeletal/cardiac m...   214   1e-55
Alignment   gi|NP_872299.2| putative myosin light chain kinase 3 [Homo sapi...   210   3e-54
Alignment   gi|NP_444253.3| myosin light chain kinase, smooth muscle isofor...   207   2e-53
Alignment   gi|NP_444254.3| myosin light chain kinase, smooth muscle isofor...   207   2e-53

>ref|NP_004751.2| serine/threonine-protein kinase 17A [Homo sapiens].
          Length = 414

 Score =  646 bits (1666), Expect = 0.0
 Identities = 335/414 (80%), Positives = 348/414 (84%), Gaps = 2/414 (0%)
 Frame = +3

Query: 132  MIPLEKPGSGDSXXXXXXXXXXXXXXXXXXXXXXXXXXXX--LTEIRTAVRTEPFQDSYS 305
            MIPLEKPGSG S                              LTEIR  VRTEPFQD YS
Sbjct: 1    MIPLEKPGSGGSSPGATSGSGRAGRGLSGPCRPPPPPQARGLLTEIRAVVRTEPFQDGYS 60

Query: 306  LSPGRELGRGKFAVVRKCIKKDSGREFAAKFMRKRRKGQDCRMEIIHEIAVLELAQDNPW 485
            L PGRELGRGKFAVVRKCIKKDSG+EFAAKFMRKRRKGQDCRMEIIHEIAVLELAQDNPW
Sbjct: 61   LCPGRELGRGKFAVVRKCIKKDSGKEFAAKFMRKRRKGQDCRMEIIHEIAVLELAQDNPW 120

Query: 486  VINLHEVYETPSEMILVLEYAAGGEIFDQCVADREEAFTEKDVQRLMRQILEGVRFLHAH 665
            VINLHEVYET SEMILVLEYAAGGEIFDQCVADREEAF EKDVQRLMRQILEGV FLH  
Sbjct: 121  VINLHEVYETASEMILVLEYAAGGEIFDQCVADREEAFKEKDVQRLMRQILEGVHFLHTR 180

Query: 666  DVVHLDLKPQNILLTSESPLGDIKIVDFGLSRIMKKSEELREIMGTPEYVAPEILSYDPI 845
            DVVHLDLKPQNILLTSESPLGDIKIVDFGLSRI+K SEELREIMGTPEYVAPEILSYDPI
Sbjct: 181  DVVHLDLKPQNILLTSESPLGDIKIVDFGLSRILKNSEELREIMGTPEYVAPEILSYDPI 240

Query: 846  SMATDMWSIGVLTYVMLTGVSPFLGDSKQETFLNISRMNLNYSEEEFDVVSESAVDFIKA 1025
            SMATDMWSIGVLTYVMLTG+SPFLG+ KQETFLNIS+MNL+YSEEEFDV+SESAVDFI+ 
Sbjct: 241  SMATDMWSIGVLTYVMLTGISPFLGNDKQETFLNISQMNLSYSEEEFDVLSESAVDFIRT 300

Query: 1026 LLVKEPEDRATAEECLKHPWLAQGSAQEPSCKLKGAPEEAQALQEGDSVPESNSDXXXXX 1205
            LLVK+PEDRATAEECLKHPWL Q S QEPS +++ A EEA ALQEG SVPE NSD     
Sbjct: 301  LLVKKPEDRATAEECLKHPWLTQSSIQEPSFRMEKALEEANALQEGHSVPEINSDTDKSE 360

Query: 1206 XXXXXXXXXLIVVTSYTLGQCRQSEKEKMEQKAISKRFKFEEPLLQEIPGDFIY 1367
                     LIVVTSYTLGQCRQSEKEKMEQKAISKRFKFEEPLLQEIPG+FIY
Sbjct: 361  TKESIVTEELIVVTSYTLGQCRQSEKEKMEQKAISKRFKFEEPLLQEIPGEFIY 414


>ref|NP_004217.1| serine/threonine-protein kinase 17B [Homo sapiens].
          Length = 372

 Score =  365 bits (936), Expect = e-101
 Identities = 192/355 (54%), Positives = 249/355 (70%)
 Frame = +3

Query: 273  VRTEPFQDSYSLSPGRELGRGKFAVVRKCIKKDSGREFAAKFMRKRRKGQDCRMEIIHEI 452
            ++ E F + Y L+  +ELGRGKFAVVR+CI K +G+E+AAKF++KRR+GQDCR EI+HEI
Sbjct: 23   IKMENFNNFYILT-SKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEI 81

Query: 453  AVLELAQDNPWVINLHEVYETPSEMILVLEYAAGGEIFDQCVADREEAFTEKDVQRLMRQ 632
            AVLELA+  P VINLHEVYE  SE+IL+LEYAAGGEIF  C+ +  E  +E DV RL++Q
Sbjct: 82   AVLELAKSCPRVINLHEVYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQ 141

Query: 633  ILEGVRFLHAHDVVHLDLKPQNILLTSESPLGDIKIVDFGLSRIMKKSEELREIMGTPEY 812
            ILEGV +LH +++VHLDLKPQNILL+S  PLGDIKIVDFG+SR +  + ELREIMGTPEY
Sbjct: 142  ILEGVYYLHQNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACELREIMGTPEY 201

Query: 813  VAPEILSYDPISMATDMWSIGVLTYVMLTGVSPFLGDSKQETFLNISRMNLNYSEEEFDV 992
            +APEIL+YDPI+ ATDMW+IG++ Y++LT  SPF+G+  QET+LNIS++N++YSEE F  
Sbjct: 202  LAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQVNVDYSEETFSS 261

Query: 993  VSESAVDFIKALLVKEPEDRATAEECLKHPWLAQGSAQEPSCKLKGAPEEAQALQEGDSV 1172
            VS+ A DFI++LLVK PE R TAE CL H WL Q   +     L    E + + Q  D  
Sbjct: 262  VSQLATDFIQSLLVKNPEKRPTAEICLSHSWLQQWDFE----NLFHPEETSSSSQTQDHS 317

Query: 1173 PESNSDXXXXXXXXXXXXXXLIVVTSYTLGQCRQSEKEKMEQKAISKRFKFEEPL 1337
              S+ D                   + T G     E    +   +SKRF+F++ L
Sbjct: 318  VRSSEDKTSKSS------------CNGTCGDREDKENIPEDSSMVSKRFRFDDSL 360


>ref|NP_004929.2| death-associated protein kinase 1 [Homo sapiens].
          Length = 1430

 Score =  256 bits (653), Expect = 5e-68
 Identities = 131/286 (45%), Positives = 189/286 (66%), Gaps = 5/286 (1%)
 Frame = +3

Query: 267  TAVRTEPFQDSYSLSPGRELGRGKFAVVRKCIKKDSGREFAAKFMRKRRKGQD----CRM 434
            T  R E   D Y    G ELG G+FAVV+KC +K +G ++AAKF++KRR         R 
Sbjct: 2    TVFRQENVDDYYDT--GEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSRE 59

Query: 435  EIIHEIAVLELAQDNPWVINLHEVYETPSEMILVLEYAAGGEIFDQCVADREEAFTEKDV 614
            +I  E+++L+  Q +P VI LHEVYE  +++IL+LE  AGGE+FD      +E+ TE++ 
Sbjct: 60   DIEREVSILKEIQ-HPNVITLHEVYENKTDVILILELVAGGELFDFLA--EKESLTEEEA 116

Query: 615  QRLMRQILEGVRFLHAHDVVHLDLKPQNILLTSES-PLGDIKIVDFGLSRIMKKSEELRE 791
               ++QIL GV +LH+  + H DLKP+NI+L   + P   IKI+DFGL+  +    E + 
Sbjct: 117  TEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN 176

Query: 792  IMGTPEYVAPEILSYDPISMATDMWSIGVLTYVMLTGVSPFLGDSKQETFLNISRMNLNY 971
            I GTPE+VAPEI++Y+P+ +  DMWSIGV+TY++L+G SPFLGD+KQET  N+S +N  +
Sbjct: 177  IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEF 236

Query: 972  SEEEFDVVSESAVDFIKALLVKEPEDRATAEECLKHPWLAQGSAQE 1109
             +E F   S  A DFI+ LLVK+P+ R T ++ L+HPW+     Q+
Sbjct: 237  EDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQQ 282


>ref|NP_001339.1| death-associated protein kinase 3 [Homo sapiens].
          Length = 454

 Score =  253 bits (647), Expect = 3e-67
 Identities = 131/319 (41%), Positives = 207/319 (64%), Gaps = 15/319 (4%)
 Frame = +3

Query: 276  RTEPFQDSYSLSPGRELGRGKFAVVRKCIKKDSGREFAAKFMRKRRKGQD----CRMEII 443
            R E  +D Y +  G ELG G+FA+VRKC +K +G+E+AAKF++KRR         R EI 
Sbjct: 5    RQEDVEDHYEM--GEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIE 62

Query: 444  HEIAVLELAQDNPWVINLHEVYETPSEMILVLEYAAGGEIFDQCVADREEAFTEKDVQRL 623
             E+ +L   + +P +I LH+++E  ++++L+LE  +GGE+FD      +E+ TE +  + 
Sbjct: 63   REVNILREIR-HPNIITLHDIFENKTDVVLILELVSGGELFDFLA--EKESLTEDEATQF 119

Query: 624  MRQILEGVRFLHAHDVVHLDLKPQNILLTSES-PLGDIKIVDFGLSRIMKKSEELREIMG 800
            ++QIL+GV +LH+  + H DLKP+NI+L  ++ P   IK++DFG++  ++   E + I G
Sbjct: 120  LKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFG 179

Query: 801  TPEYVAPEILSYDPISMATDMWSIGVLTYVMLTGVSPFLGDSKQETFLNISRMNLNYSEE 980
            TPE+VAPEI++Y+P+ +  DMWSIGV+TY++L+G SPFLG++KQET  NIS +N ++ EE
Sbjct: 180  TPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEE 239

Query: 981  EFDVVSESAVDFIKALLVKEPEDRATAEECLKHPWL---------AQGSAQEPS-CKLKG 1130
             F   SE A DFI+ LLVK+P+ R T  + L+H W+          + S ++P   +LK 
Sbjct: 240  YFSNTSELAKDFIRRLLVKDPKRRMTIAQSLEHSWIKAIRRRNVRGEDSGRKPERRRLKT 299

Query: 1131 APEEAQALQEGDSVPESNS 1187
               +   ++   S+P +NS
Sbjct: 300  TRLKEYTIKSHSSLPPNNS 318


>ref|NP_055141.2| death-associated protein kinase 2 [Homo sapiens].
          Length = 370

 Score =  249 bits (637), Expect = 4e-66
 Identities = 128/287 (44%), Positives = 194/287 (67%), Gaps = 11/287 (3%)
 Frame = +3

Query: 282  EPF-----QDSYSLSPGRELGRGKFAVVRKCIKKDSGREFAAKFMRKR-----RKGQDCR 431
            EPF     +D Y +  G ELG G+FA+V+KC +K +G E+AAKF++KR     R+G   R
Sbjct: 12   EPFKQQKVEDFYDI--GEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVS-R 68

Query: 432  MEIIHEIAVLELAQDNPWVINLHEVYETPSEMILVLEYAAGGEIFDQCVADREEAFTEKD 611
             EI  E+++L     +  VI LH+VYE  ++++L+LE  +GGE+FD     ++E+ +E++
Sbjct: 69   EEIEREVSILRQVLHHN-VITLHDVYENRTDVVLILELVSGGELFDFLA--QKESLSEEE 125

Query: 612  VQRLMRQILEGVRFLHAHDVVHLDLKPQNILLTSES-PLGDIKIVDFGLSRIMKKSEELR 788
                ++QIL+GV +LH   + H DLKP+NI+L  ++ P+  IK++DFGL+  ++   E +
Sbjct: 126  ATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFK 185

Query: 789  EIMGTPEYVAPEILSYDPISMATDMWSIGVLTYVMLTGVSPFLGDSKQETFLNISRMNLN 968
             I GTPE+VAPEI++Y+P+ +  DMWSIGV+TY++L+G SPFLGD+KQET  NI+ ++ +
Sbjct: 186  NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYD 245

Query: 969  YSEEEFDVVSESAVDFIKALLVKEPEDRATAEECLKHPWLAQGSAQE 1109
            + EE F   SE A DFI+ LLVKE   R T +E L+HPW+     Q+
Sbjct: 246  FDEEFFSQTSELAKDFIRKLLVKETRKRLTIQEALRHPWITPVDNQQ 292


>ref|NP_001012418.2| myosin light chain kinase family member 4 [Homo sapiens].
          Length = 388

 Score =  218 bits (555), Expect = 1e-56
 Identities = 114/264 (43%), Positives = 172/264 (65%)
 Frame = +3

Query: 300  YSLSPGRELGRGKFAVVRKCIKKDSGREFAAKFMRKRRKGQDCRMEIIHEIAVLELAQDN 479
            Y++S    LG G+F  V KC +  +G + AAK ++ R  G   + E+ +EI+V+    D+
Sbjct: 104  YTVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTR--GMKDKEEVKNEISVMNQL-DH 160

Query: 480  PWVINLHEVYETPSEMILVLEYAAGGEIFDQCVADREEAFTEKDVQRLMRQILEGVRFLH 659
              +I L++ +E+ ++++LV+EY  GGE+FD+ + D     TE D    M+QI EG+R +H
Sbjct: 161  ANLIQLYDAFESKNDIVLVMEYVDGGELFDRII-DESYNLTELDTILFMKQICEGIRHMH 219

Query: 660  AHDVVHLDLKPQNILLTSESPLGDIKIVDFGLSRIMKKSEELREIMGTPEYVAPEILSYD 839
               ++HLDLKP+NIL  +      IKI+DFGL+R  K  E+L+   GTPE++APE+++YD
Sbjct: 220  QMYILHLDLKPENILCVNRDAK-QIKIIDFGLARRYKPREKLKVNFGTPEFLAPEVVNYD 278

Query: 840  PISMATDMWSIGVLTYVMLTGVSPFLGDSKQETFLNISRMNLNYSEEEFDVVSESAVDFI 1019
             +S  TDMWS+GV+ Y++L+G+SPFLGD+  ET  NI     +  +EEF  +SE A +FI
Sbjct: 279  FVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILACRWDLEDEEFQDISEEAKEFI 338

Query: 1020 KALLVKEPEDRATAEECLKHPWLA 1091
              LL+KE   R +A E LKHPWL+
Sbjct: 339  SKLLIKEKSWRISASEALKHPWLS 362


>ref|NP_149109.1| myosin light chain kinase 2, skeletal/cardiac muscle [Homo sapiens].
          Length = 596

 Score =  214 bits (546), Expect = 1e-55
 Identities = 114/282 (40%), Positives = 175/282 (62%)
 Frame = +3

Query: 273  VRTEPFQDSYSLSPGRELGRGKFAVVRKCIKKDSGREFAAKFMRKRRKGQDCRMEIIHEI 452
            +RT      +S++    LG GKF  V  C++K +G + AAK ++K+   +D  M ++   
Sbjct: 274  LRTGNVSSEFSMNSKEALGGGKFGAVCTCMEKATGLKLAAKVIKKQTP-KDKEMVLLEIE 332

Query: 453  AVLELAQDNPWVINLHEVYETPSEMILVLEYAAGGEIFDQCVADREEAFTEKDVQRLMRQ 632
             + +L   N  +I L+   ETP E++L +EY  GGE+F++ V D +   TE D    +RQ
Sbjct: 333  VMNQLNHRN--LIQLYAAIETPHEIVLFMEYIEGGELFERIV-DEDYHLTEVDTMVFVRQ 389

Query: 633  ILEGVRFLHAHDVVHLDLKPQNILLTSESPLGDIKIVDFGLSRIMKKSEELREIMGTPEY 812
            I +G+ F+H   V+HLDLKP+NIL  + +    +KI+DFGL+R    +E+L+   GTPE+
Sbjct: 390  ICDGILFMHKMRVLHLDLKPENILCVNTTG-HLVKIIDFGLARRYNPNEKLKVNFGTPEF 448

Query: 813  VAPEILSYDPISMATDMWSIGVLTYVMLTGVSPFLGDSKQETFLNISRMNLNYSEEEFDV 992
            ++PE+++YD IS  TDMWS+GV+TY++L+G+SPFLGD   ET  N+   N  + EE F+ 
Sbjct: 449  LSPEVVNYDQISDKTDMWSMGVITYMLLSGLSPFLGDDDTETLNNVLSGNWYFDEETFEA 508

Query: 993  VSESAVDFIKALLVKEPEDRATAEECLKHPWLAQGSAQEPSC 1118
            VS+ A DF+  L+VK+   R  A +CL HPWL   + +   C
Sbjct: 509  VSDEAKDFVSNLIVKDQRARMNAAQCLAHPWLNNLAEKAKRC 550


>ref|NP_872299.2| putative myosin light chain kinase 3 [Homo sapiens].
          Length = 819

 Score =  210 bits (534), Expect = 3e-54
 Identities = 112/274 (40%), Positives = 173/274 (63%), Gaps = 1/274 (0%)
 Frame = +3

Query: 270  AVRTEPFQDSYSLSPGRELGRGKFAVVRKCIKKDSGREFAAKFMRKRRKGQDCRMEIIHE 449
            +V+       Y +     LG G+F  V +C +K +G   AAK ++   K    R ++ +E
Sbjct: 503  SVKETSISAGYEVCQHEVLGGGRFGQVHRCTEKSTGLPLAAKIIKV--KSAKDREDVKNE 560

Query: 450  IAVL-ELAQDNPWVINLHEVYETPSEMILVLEYAAGGEIFDQCVADREEAFTEKDVQRLM 626
            I ++ +L+  N  +I L++ +E+     LV+EY  GGE+FD+ + D +   TE DV    
Sbjct: 561  INIMNQLSHVN--LIQLYDAFESKHSCTLVMEYVDGGELFDR-ITDEKYHLTELDVVLFT 617

Query: 627  RQILEGVRFLHAHDVVHLDLKPQNILLTSESPLGDIKIVDFGLSRIMKKSEELREIMGTP 806
            RQI EGV +LH H ++HLDLKP+NIL  +++    IKI+DFGL+R  K  E+L+   GTP
Sbjct: 618  RQICEGVHYLHQHYILHLDLKPENILCVNQTG-HQIKIIDFGLARRYKPREKLKVNFGTP 676

Query: 807  EYVAPEILSYDPISMATDMWSIGVLTYVMLTGVSPFLGDSKQETFLNISRMNLNYSEEEF 986
            E++APE+++Y+ +S  TDMWS+GV+TY++L+G+SPFLG++  ET   I   + ++  + F
Sbjct: 677  EFLAPEVVNYEFVSFPTDMWSVGVITYMLLSGLSPFLGETDAETMNFIVNCSWDFDADTF 736

Query: 987  DVVSESAVDFIKALLVKEPEDRATAEECLKHPWL 1088
            + +SE A DF+  LLVKE   R +A +CLKH WL
Sbjct: 737  EGLSEEAKDFVSRLLVKEKSCRMSATQCLKHEWL 770


>ref|NP_444253.3| myosin light chain kinase, smooth muscle isoform 1 [Homo sapiens].
          Length = 1914

 Score =  207 bits (528), Expect = 2e-53
 Identities = 100/267 (37%), Positives = 174/267 (65%)
 Frame = +3

Query: 324  LGRGKFAVVRKCIKKDSGREFAAKFMRKRRKGQDCRMEIIHEIAVLELAQDNPWVINLHE 503
            LG GKF  V + ++K + + +A KF +     +  +  I  EI+++     +P ++   +
Sbjct: 1470 LGSGKFGQVFRLVEKKTRKVWAGKFFKAYSAKE--KENIRQEISIMNCLH-HPKLVQCVD 1526

Query: 504  VYETPSEMILVLEYAAGGEIFDQCVADREEAFTEKDVQRLMRQILEGVRFLHAHDVVHLD 683
             +E  + +++VLE  +GGE+F++ + D +   TE++  + MRQI EGV ++H   +VHLD
Sbjct: 1527 AFEEKANIVMVLEIVSGGELFERII-DEDFELTERECIKYMRQISEGVEYIHKQGIVHLD 1585

Query: 684  LKPQNILLTSESPLGDIKIVDFGLSRIMKKSEELREIMGTPEYVAPEILSYDPISMATDM 863
            LKP+NI+  +++    IK++DFGL+R ++ +  L+ + GTPE+VAPE+++Y+PI  ATDM
Sbjct: 1586 LKPENIMCVNKTGTR-IKLIDFGLARRLENAGSLKVLFGTPEFVAPEVINYEPIGYATDM 1644

Query: 864  WSIGVLTYVMLTGVSPFLGDSKQETFLNISRMNLNYSEEEFDVVSESAVDFIKALLVKEP 1043
            WSIGV+ Y++++G+SPF+GD+  ET  N++    ++ +E FD +S+ A DFI  LL K+ 
Sbjct: 1645 WSIGVICYILVSGLSPFMGDNDNETLANVTSATWDFDDEAFDEISDDAKDFISNLLKKDM 1704

Query: 1044 EDRATAEECLKHPWLAQGSAQEPSCKL 1124
            ++R    +CL+HPWL + +    + KL
Sbjct: 1705 KNRLDCTQCLQHPWLMKDTKNMEAKKL 1731


>ref|NP_444254.3| myosin light chain kinase, smooth muscle isoform 2 [Homo sapiens].
          Length = 1845

 Score =  207 bits (528), Expect = 2e-53
 Identities = 100/267 (37%), Positives = 174/267 (65%)
 Frame = +3

Query: 324  LGRGKFAVVRKCIKKDSGREFAAKFMRKRRKGQDCRMEIIHEIAVLELAQDNPWVINLHE 503
            LG GKF  V + ++K + + +A KF +     +  +  I  EI+++     +P ++   +
Sbjct: 1401 LGSGKFGQVFRLVEKKTRKVWAGKFFKAYSAKE--KENIRQEISIMNCLH-HPKLVQCVD 1457

Query: 504  VYETPSEMILVLEYAAGGEIFDQCVADREEAFTEKDVQRLMRQILEGVRFLHAHDVVHLD 683
             +E  + +++VLE  +GGE+F++ + D +   TE++  + MRQI EGV ++H   +VHLD
Sbjct: 1458 AFEEKANIVMVLEIVSGGELFERII-DEDFELTERECIKYMRQISEGVEYIHKQGIVHLD 1516

Query: 684  LKPQNILLTSESPLGDIKIVDFGLSRIMKKSEELREIMGTPEYVAPEILSYDPISMATDM 863
            LKP+NI+  +++    IK++DFGL+R ++ +  L+ + GTPE+VAPE+++Y+PI  ATDM
Sbjct: 1517 LKPENIMCVNKTGTR-IKLIDFGLARRLENAGSLKVLFGTPEFVAPEVINYEPIGYATDM 1575

Query: 864  WSIGVLTYVMLTGVSPFLGDSKQETFLNISRMNLNYSEEEFDVVSESAVDFIKALLVKEP 1043
            WSIGV+ Y++++G+SPF+GD+  ET  N++    ++ +E FD +S+ A DFI  LL K+ 
Sbjct: 1576 WSIGVICYILVSGLSPFMGDNDNETLANVTSATWDFDDEAFDEISDDAKDFISNLLKKDM 1635

Query: 1044 EDRATAEECLKHPWLAQGSAQEPSCKL 1124
            ++R    +CL+HPWL + +    + KL
Sbjct: 1636 KNRLDCTQCLQHPWLMKDTKNMEAKKL 1662


  Database: RefSeq49_HP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 18,297,164
  Number of sequences in database:  32,964
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 32964
Number of Hits to DB: 52,769,969
Number of extensions: 1222474
Number of successful extensions: 6693
Number of sequences better than 1.0e-05: 762
Number of HSP's gapped: 5104
Number of HSP's successfully gapped: 789
Length of query: 529
Length of database: 18,297,164
Length adjustment: 107
Effective length of query: 422
Effective length of database: 14,770,016
Effective search space: 6232946752
Effective search space used: 6232946752
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)

BLASTN 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-012848
         (1588 letters)

Database: Sscrofa_10.2.fasta 
           4582 sequences; 2,808,509,378 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|JH118657.1| Sus scrofa unplaced genomic scaffold ChrUScaf1499      957   0.0  
Sscrofa_Chr18                                                         957   0.0  
Sscrofa_Chr01                                                         492   e-136

>gb|JH118657.1| Sus scrofa unplaced genomic scaffold ChrUScaf1499
          Length = 79552

 Score =  957 bits (483), Expect = 0.0
 Identities = 531/545 (97%), Gaps = 2/545 (0%)
 Strand = Plus / Plus

                                                                        
Query: 1046 agatcgcgccactgctgaagagtgtctgaaacacccatggctggcacagggcagtgccca 1105
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6041 agatcgcgccactgctgaagagtgtctgaaacacccatggctggcacagggcagtgccca 6100

                                                                        
Query: 1106 ggaaccgtcctgcaagctgaaaggggcgcccgaggaagcccaggccctccaggaaggcga 1165
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6101 ggaaccgtcctgcaagctgaaaggggcgcccgaggaagcccaggccctccaggaaggcga 6160

                                                                        
Query: 1166 ttctgtgcctgaaagtaactcagaccctcagacacccgaaacccaggagccagtcgtaac 1225
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 6161 ttctgtgcctgaaagtaactcagaccctcagacacccgaaacccaggagccagtcctaac 6220

                                                                        
Query: 1226 agaggagttaattgtagttacttcctacactttaggacaatgcagacagtcggaaaaaga 1285
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6221 agaggagttaattgtagttacttcctacactttaggacaatgcagacagtcggaaaaaga 6280

                                                                        
Query: 1286 gaaaatggagcaaaaggccatttccaaacgatttaaatttgaggaacctttgctacagga 1345
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6281 gaaaatggagcaaaaggccatttccaaacgatttaaatttgaggaacctttgctacagga 6340

                                                                        
Query: 1346 aattccaggcgattttatctactgagcagcatctccctctaggacttgaaaatttctact 1405
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6341 aattccaggcgattttatctactgagcagcatctccctctaggacttgaaaatttctact 6400

                                                                        
Query: 1406 ttgggaccattatttatgaacttctggcccaatggtacaagtactgaaagtggatgacca 1465
            ||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||
Sbjct: 6401 ttgggaccattatttatgaacttctggccaaatggtacaggtactgaaagtggatgacca 6460

                                                                        
Query: 1466 agtgtcactgatagaacctgaaatgactgtcagacttgtggagtcagaagaatccagcca 1525
             |||||||||||||||||||||||||||||||||||||||||||||||  |||| |||||
Sbjct: 6461 ggtgtcactgatagaacctgaaatgactgtcagacttgtggagtcagagaaatcaagcca 6520

                                                                        
Query: 1526 gatctagtcaagttgccaa-cagcagg-ttnatgggntacgtcatctgtttcaatggtct 1583
            ||||||||||||||||||| ||||||| || | |||  |||||||||||||||||| |||
Sbjct: 6521 gatctagtcaagttgccaaccagcaggtttaacgggtaacgtcatctgtttcaatgttct 6580

                 
Query: 1584 tttta 1588
            |||||
Sbjct: 6581 tttta 6585



 Score =  359 bits (181), Expect = 3e-96
 Identities = 181/181 (100%)
 Strand = Plus / Plus

                                                                        
Query: 865  ggagcatcggagtgctgacgtacgtcatgctgacgggagtgtcgcctttcctgggcgaca 924
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5422 ggagcatcggagtgctgacgtacgtcatgctgacgggagtgtcgcctttcctgggcgaca 5481

                                                                        
Query: 925  gtaaacaagaaacgttcctcaacatctcgcggatgaacttaaattattctgaggaggaat 984
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5482 gtaaacaagaaacgttcctcaacatctcgcggatgaacttaaattattctgaggaggaat 5541

                                                                        
Query: 985  tcgatgttgtgtccgagtcggctgttgacttcatcaaggcgcttttagttaaggaacctg 1044
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5542 tcgatgttgtgtccgagtcggctgttgacttcatcaaggcgcttttagttaaggaacctg 5601

             
Query: 1045 a 1045
            |
Sbjct: 5602 a 5602



 Score =  147 bits (74), Expect = 2e-32
 Identities = 74/74 (100%)
 Strand = Plus / Plus

                                                                        
Query: 688  agcctcagaatattctgctgacaagtgaatctccgttgggtgacattaagatagtcgact 747
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1535 agcctcagaatattctgctgacaagtgaatctccgttgggtgacattaagatagtcgact 1594

                          
Query: 748  tcggactttcgaga 761
            ||||||||||||||
Sbjct: 1595 tcggactttcgaga 1608



 Score =  101 bits (51), Expect = 1e-18
 Identities = 51/51 (100%)
 Strand = Plus / Plus

                                                               
Query: 816  gctcctgaaattcttagttatgatcctatcagcatggcaacggacatgtgg 866
            |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5285 gctcctgaaattcttagttatgatcctatcagcatggcaacggacatgtgg 5335



 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 34/34 (100%)
 Strand = Plus / Plus

                                              
Query: 783  ctgcgggagattatgggcacccctgagtacgtgg 816
            ||||||||||||||||||||||||||||||||||
Sbjct: 1709 ctgcgggagattatgggcacccctgagtacgtgg 1742


>Sscrofa_Chr18 
||          Length = 61220071

 Score =  957 bits (483), Expect = 0.0
 Identities = 531/545 (97%), Gaps = 2/545 (0%)
 Strand = Plus / Minus

                                                                            
Query: 1046     agatcgcgccactgctgaagagtgtctgaaacacccatggctggcacagggcagtgccca 1105
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 56219648 agatcgcgccactgctgaagagtgtctgaaacacccatggctggcacagggcagtgccca 56219589

                                                                            
Query: 1106     ggaaccgtcctgcaagctgaaaggggcgcccgaggaagcccaggccctccaggaaggcga 1165
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 56219588 ggaaccgtcctgcaagctgaaaggggcgcccgaggaagcccaggccctccaggaaggcga 56219529

                                                                            
Query: 1166     ttctgtgcctgaaagtaactcagaccctcagacacccgaaacccaggagccagtcgtaac 1225
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 56219528 ttctgtgcctgaaagtaactcagaccctcagacacccgaaacccaggagccagtcctaac 56219469

                                                                            
Query: 1226     agaggagttaattgtagttacttcctacactttaggacaatgcagacagtcggaaaaaga 1285
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 56219468 agaggagttaattgtagttacttcctacactttaggacaatgcagacagtcggaaaaaga 56219409

                                                                            
Query: 1286     gaaaatggagcaaaaggccatttccaaacgatttaaatttgaggaacctttgctacagga 1345
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 56219408 gaaaatggagcaaaaggccatttccaaacgatttaaatttgaggaacctttgctacagga 56219349

                                                                            
Query: 1346     aattccaggcgattttatctactgagcagcatctccctctaggacttgaaaatttctact 1405
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 56219348 aattccaggcgattttatctactgagcagcatctccctctaggacttgaaaatttctact 56219289

                                                                            
Query: 1406     ttgggaccattatttatgaacttctggcccaatggtacaagtactgaaagtggatgacca 1465
                ||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||
Sbjct: 56219288 ttgggaccattatttatgaacttctggccaaatggtacaggtactgaaagtggatgacca 56219229

                                                                            
Query: 1466     agtgtcactgatagaacctgaaatgactgtcagacttgtggagtcagaagaatccagcca 1525
                 |||||||||||||||||||||||||||||||||||||||||||||||  |||| |||||
Sbjct: 56219228 ggtgtcactgatagaacctgaaatgactgtcagacttgtggagtcagagaaatcaagcca 56219169

                                                                            
Query: 1526     gatctagtcaagttgccaa-cagcagg-ttnatgggntacgtcatctgtttcaatggtct 1583
                ||||||||||||||||||| ||||||| || | |||  |||||||||||||||||| |||
Sbjct: 56219168 gatctagtcaagttgccaaccagcaggtttaacgggtaacgtcatctgtttcaatgttct 56219109

                     
Query: 1584     tttta 1588
                |||||
Sbjct: 56219108 tttta 56219104



 Score =  426 bits (215), Expect = e-116
 Identities = 215/215 (100%)
 Strand = Plus / Minus

                                                                            
Query: 330      agggggaaatttgcagtggtgaggaaatgtataaagaaagactctggaagagaatttgca 389
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 56242665 agggggaaatttgcagtggtgaggaaatgtataaagaaagactctggaagagaatttgca 56242606

                                                                            
Query: 390      gcaaagttcatgagaaaaaggagaaaaggccaagattgtcggatggaaataattcacgaa 449
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 56242605 gcaaagttcatgagaaaaaggagaaaaggccaagattgtcggatggaaataattcacgaa 56242546

                                                                            
Query: 450      attgctgtacttgaactagcacaggacaatccttgggtcattaacttgcatgaagtctat 509
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 56242545 attgctgtacttgaactagcacaggacaatccttgggtcattaacttgcatgaagtctat 56242486

                                                   
Query: 510      gaaacgccgtcggagatgatcttagttctggaata 544
                |||||||||||||||||||||||||||||||||||
Sbjct: 56242485 gaaacgccgtcggagatgatcttagttctggaata 56242451



 Score =  323 bits (163), Expect = 2e-85
 Identities = 166/167 (99%)
 Strand = Plus / Minus

                                                                            
Query: 2        agtccgagcgcggcgcggaggagagcggttgcttccctccgaccggctggaggctgctgg 61
                ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 56255444 agtccgagcgcggcgcggaggagagcggttgcttctctccgaccggctggaggctgctgg 56255385

                                                                            
Query: 62       aggcggggccgttacccgccggcagctcggagcgagccgggcggccagaaagccggcgcg 121
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 56255384 aggcggggccgttacccgccggcagctcggagcgagccgggcggccagaaagccggcgcg 56255325

                                                               
Query: 122      cccgagcgccatgattcctctggagaagccgggcagcggcgactcct 168
                |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 56255324 cccgagcgccatgattcctctggagaagccgggcagcggcgactcct 56255278



 Score =  287 bits (145), Expect = 9e-75
 Identities = 145/145 (100%)
 Strand = Plus / Minus

                                                                            
Query: 545      tgccgctgggggcgagatctttgaccagtgtgtggcagacagagaagaagcctttacgga 604
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 56233526 tgccgctgggggcgagatctttgaccagtgtgtggcagacagagaagaagcctttacgga 56233467

                                                                            
Query: 605      aaaagatgttcagagactcatgaggcagatcttagaaggtgtccgctttttacacgctca 664
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 56233466 aaaagatgttcagagactcatgaggcagatcttagaaggtgtccgctttttacacgctca 56233407

                                         
Query: 665      cgatgtggtgcatcttgatctgaag 689
                |||||||||||||||||||||||||
Sbjct: 56233406 cgatgtggtgcatcttgatctgaag 56233382



 Score =  248 bits (125), Expect = 8e-63
 Identities = 173/181 (95%), Gaps = 6/181 (3%)
 Strand = Plus / Minus

                                                                            
Query: 865      ggagcatcggagtgctgacgtacgtcatgctgacgggagtgtcgcctttcctgggcgaca 924
                ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 56220261 ggagcatcg-agtgctgacgtacgtcatgctgacgggagtgtcgcctttcctgggcgaca 56220203

                                                                            
Query: 925      gtaaacaagaaacgttcctcaacatctcgcggatgaacttaaattattctgaggaggaat 984
                |||||| ||||||||||||| |||||||||||||| |||||||||||||||| |||||||
Sbjct: 56220202 gtaaaccagaaacgttcctc-acatctcgcggatg-acttaaattattctga-gaggaat 56220146

                                                                            
Query: 985      tcgatgttgtgtccgagtcggctgttgacttcatcaaggcgcttttagttaaggaacctg 1044
                |||||| |||||| |||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 56220145 tcgatg-tgtgtcggagtcggctgttgacttcatcaaggcgc-tttagttaaggaacctg 56220088

                 
Query: 1045     a 1045
                |
Sbjct: 56220087 a 56220087



 Score =  165 bits (83), Expect = 9e-38
 Identities = 83/83 (100%)
 Strand = Plus / Minus

                                                                            
Query: 250      tgctgacggagatccgcaccgccgtgcgcaccgagcccttccaggacagctacagcctga 309
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 56255196 tgctgacggagatccgcaccgccgtgcgcaccgagcccttccaggacagctacagcctga 56255137

                                       
Query: 310      gcccgggccgggagctgggcagg 332
                |||||||||||||||||||||||
Sbjct: 56255136 gcccgggccgggagctgggcagg 56255114



 Score =  101 bits (51), Expect = 1e-18
 Identities = 51/51 (100%)
 Strand = Plus / Minus

                                                                   
Query: 816      gctcctgaaattcttagttatgatcctatcagcatggcaacggacatgtgg 866
                |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 56220397 gctcctgaaattcttagttatgatcctatcagcatggcaacggacatgtgg 56220347


>Sscrofa_Chr01 
||          Length = 315321322

 Score =  492 bits (248), Expect = e-136
 Identities = 415/470 (88%), Gaps = 3/470 (0%)
 Strand = Plus / Minus

                                                                            
Query: 273      gtgcgcaccgagcccttccaggacagctacagcctgagcccgggccgggagctgggcagg 332
                |||| |||| ||||||||||||||||||||||| | || || || | |||| ||||||||
Sbjct: 96833208 gtgcccaccaagcccttccaggacagctacagcttaagtccaggtcaggagatgggcagg 96833149

                                                                            
Query: 333      gggaaatttgcagtggtgaggaaatgtataaagaaagactctggaagagaatttgcagca 392
                |||||||||||||||||||||||||||||||||||||||||||||| ||||||||  |||
Sbjct: 96833148 gggaaatttgcagtggtgaggaaatgtataaagaaagactctggaaaagaatttgtggca 96833089

                                                                            
Query: 393      aagttcatgagaaaaaggagaaaaggccaagattgtcggatggaaataattcacgaaatt 452
                | |||||||||| |||| |||||||||||||| |||| ||||||| |||||||| | |||
Sbjct: 96833088 aggttcatgagagaaagaagaaaaggccaagactgtcagatggaagtaattcacaacatt 96833029

                                                                            
Query: 453      gctgtacttgaactagcacaggacaatccttgggtcattaacttgcatgaagtctatgaa 512
                |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 96833028 gctgtacttgaactagcataggacaatccttgggtcattaacttgcatgaagtctatgaa 96832969

                                                                            
Query: 513      acgccgtcggagatgatcttagttctggaatatgccgctgggggcgagatctttgaccag 572
                || || || || ||||| ||||||||| |||||||| ||||||  || ||||||||||||
Sbjct: 96832968 actccatcagaaatgattttagttctgtaatatgcccctggggctgaaatctttgaccag 96832909

                                                                            
Query: 573      tgtgtggcagacagagaagaagcctttacggaaaaagatgttcagagactcatgaggcag 632
                  ||| |||||||||   |||||||||| |||||||||  ||||||||||||||||||||
Sbjct: 96832908 catgttgcagacaga---gaagcctttaaggaaaaagaaattcagagactcatgaggcag 96832852

                                                                            
Query: 633      atcttagaaggtgtccgctttttacacgctcacgatgtggtgcatcttgatctgaagcct 692
                ||||| |||||||  |||||||||||| |||| ||||  || |||||||||||||||  |
Sbjct: 96832851 atcttcgaaggtgctcgctttttacacactcatgatgcagttcatcttgatctgaagtgt 96832792

                                                                  
Query: 693      cagaatattctgctgacaagtgaatctccgttgggtgacattaagatagt 742
                ||||| ||||||||||||||||||||||| ||| ||||||| ||| ||||
Sbjct: 96832791 cagaacattctgctgacaagtgaatctccattgagtgacatcaagttagt 96832742


  Database: Sscrofa_10.2.fasta
    Posted date:  Nov 16, 2011 10:34 AM
  Number of letters in database: 2,808,509,378
  Number of sequences in database:  4582
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4582
Number of Hits to DB: 41,084,182
Number of extensions: 272
Number of successful extensions: 272
Number of sequences better than 1.0e-05: 3
Number of HSP's gapped: 267
Number of HSP's successfully gapped: 13
Length of query: 1588
Length of database: 2,808,509,378
Length adjustment: 22
Effective length of query: 1566
Effective length of database: 2,808,408,574
Effective search space: 4397967826884
Effective search space used: 4397967826884
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 18 (36.2 bits)
S2: 30 (60.0 bits)