Search to RefSeqBP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-012859
(1139 letters)
Database: RefSeq49_BP.fasta
33,088 sequences; 17,681,374 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001091486.1| tyrosine-protein phosphatase non-receptor ty... 577 e-165
Alignment gi|XP_002694636.1| PREDICTED: protein tyrosine phosphatase, non... 346 2e-95
Alignment gi|XP_002694238.1| PREDICTED: MGC107851 protein-like [Bos tauru... 333 2e-91
Alignment gi|XP_605143.5| PREDICTED: protein-tyrosine phosphatase SHP-2b-... 333 2e-91
Alignment gi|NP_776850.1| 1-phosphatidylinositol-4,5-bisphosphate phospho... 66 7e-11
Alignment gi|NP_001179489.1| GRB2-related adaptor protein 2 [Bos taurus]. 63 6e-10
Alignment gi|XP_002687983.1| PREDICTED: GRB2-related adaptor protein 2-li... 63 6e-10
Alignment gi|NP_001070359.1| dual adapter for phosphotyrosine and 3-phosp... 62 7e-10
Alignment gi|NP_776874.1| ras GTPase-activating protein 1 [Bos taurus]. 57 2e-08
Alignment gi|XP_589041.3| PREDICTED: 1-phosphatidylinositol-4,5-bisphosph... 57 4e-08
>ref|NP_001091486.1| tyrosine-protein phosphatase non-receptor type 6 [Bos taurus].
Length = 593
Score = 577 bits (1486), Expect = e-165
Identities = 286/316 (90%), Positives = 294/316 (93%), Gaps = 2/316 (0%)
Frame = +2
Query: 179 MVRWFHRDLSGLDAETLLKGRGVHGSFLARPSRKNQGDFSLSVRVGDQVTHIRIQNSGDF 358
MVRWFHRDLSGLDAETLLKGRGVHGSFLARPSRKNQGDFSLSVRVGDQVTHIRIQNSGDF
Sbjct: 1 MVRWFHRDLSGLDAETLLKGRGVHGSFLARPSRKNQGDFSLSVRVGDQVTHIRIQNSGDF 60
Query: 359 YDLYGGEKFATLTELVEYYTQQQGVLQDRDGTIIHLKYPLNCSDPTSERWYHGHMSGGQA 538
YDLYGGEKFATLTELVEYYTQQQGVLQDRDGTIIHLKYPLNCSDPTSERWYHGHMSGGQA
Sbjct: 61 YDLYGGEKFATLTELVEYYTQQQGVLQDRDGTIIHLKYPLNCSDPTSERWYHGHMSGGQA 120
Query: 539 ETLLQAKGEPWTFLVRESLSQPGDFVLSVLSDQPKAGPGSPLKVTHIKVMCEGGRYTVGG 718
ETLLQAKGEPWTFLVRESLSQPGDFVLSVLSDQPKAGPGSPL+VTHIKVMCEGGRYTVGG
Sbjct: 121 ETLLQAKGEPWTFLVRESLSQPGDFVLSVLSDQPKAGPGSPLRVTHIKVMCEGGRYTVGG 180
Query: 719 PETFDSLTDLVEHFKKTGIEEASGAFVYLRQPYYATRVNAADIENRVLELNQKQESEETA 898
ETFDSLTDLVEHFK+TGIEEASGAFVYLRQPYYATRVNAADIENRVLELN+KQESEETA
Sbjct: 181 SETFDSLTDLVEHFKRTGIEEASGAFVYLRQPYYATRVNAADIENRVLELNKKQESEETA 240
Query: 899 KAGFWEEFESLQKQEVKNLHQRLEGQRPKNKSKNRYQNI--FHSTQPSDPARDGTVTSLG 1072
KAGFWEEFESLQKQEVKNLHQRLEGQRP+NKSKNRY+NI F ++ RD + G
Sbjct: 241 KAGFWEEFESLQKQEVKNLHQRLEGQRPENKSKNRYKNILPFDHSRVVLQGRDSNIP--G 298
Query: 1073 PDYFNPTYVKNNC*GP 1120
DY N YVKN GP
Sbjct: 299 SDYINANYVKNQLLGP 314
Score = 69.3 bits (168), Expect = 6e-12
Identities = 41/111 (36%), Positives = 62/111 (55%), Gaps = 10/111 (9%)
Frame = +2
Query: 173 PRMVRWFHRDLSGLDAETLLKGRGVHGSFLARPSRKNQGDFSLSVRVGDQ---------- 322
P RW+H +SG AETLL+ +G +FL R S GDF LSV + DQ
Sbjct: 105 PTSERWYHGHMSGGQAETLLQAKGEPWTFLVRESLSQPGDFVLSV-LSDQPKAGPGSPLR 163
Query: 323 VTHIRIQNSGDFYDLYGGEKFATLTELVEYYTQQQGVLQDRDGTIIHLKYP 475
VTHI++ G Y + G E F +LT+LVE++ ++ +++ G ++L+ P
Sbjct: 164 VTHIKVMCEGGRYTVGGSETFDSLTDLVEHF--KRTGIEEASGAFVYLRQP 212
>ref|XP_002694636.1| PREDICTED: protein tyrosine phosphatase, non-receptor type 11-like
[Bos taurus].
Length = 722
Score = 346 bits (887), Expect = 2e-95
Identities = 174/315 (55%), Positives = 221/315 (70%), Gaps = 3/315 (0%)
Frame = +2
Query: 164 PGHPRM--VRWFHRDLSGLDAETLLKGRGVHGSFLARPSRKNQGDFSLSVRVGDQVTHIR 337
PG R VRWFH +++G++AE LL RGV GSFLARPS+ N GDF+LSVR VTHI+
Sbjct: 125 PGDARQDGVRWFHPNITGVEAENLLLTRGVDGSFLARPSKSNPGDFTLSVRRNGAVTHIK 184
Query: 338 IQNSGDFYDLYGGEKFATLTELVEYYTQQQGVLQDRDGTIIHLKYPLNCSDPTSERWYHG 517
IQN+GD+YDLYGGEKFATL ELV+YY + G L++++G +I LKYPLNC+DPTSERW+HG
Sbjct: 185 IQNTGDYYDLYGGEKFATLAELVQYYMEHHGQLKEKNGDVIELKYPLNCADPTSERWFHG 244
Query: 518 HMSGGQAETLLQAKGEPWTFLVRESLSQPGDFVLSVLSDQPKA-GPGSPLKVTHIKVMCE 694
H+SG +AE LL KG+ +FLVRES S PGDFVLSV + K + KVTH+ + C+
Sbjct: 245 HLSGKEAEKLLTEKGKHGSFLVRESQSHPGDFVLSVRTGDDKGESNDAKSKVTHVMIRCQ 304
Query: 695 GGRYTVGGPETFDSLTDLVEHFKKTGIEEASGAFVYLRQPYYATRVNAADIENRVLELNQ 874
+Y VGG E FDSLTDLVEH+KK + E G + L+QP TR+NAA+IE+RV EL++
Sbjct: 305 ELKYDVGGGERFDSLTDLVEHYKKNPMVETLGTVLQLKQPLNTTRINAAEIESRVRELSK 364
Query: 875 KQESEETAKAGFWEEFESLQKQEVKNLHQRLEGQRPKNKSKNRYQNIFHSTQPSDPARDG 1054
E+ + K GFWEEFE+LQ+QE K L+ R EGQR +NK+KNRY+NI DG
Sbjct: 365 LAETTDKVKQGFWEEFETLQQQECKLLYSRKEGQRQENKNKNRYKNILPFDHTRVVLHDG 424
Query: 1055 TVTSLGPDYFNPTYV 1099
DY N +
Sbjct: 425 DPNEPVSDYINANII 439
>ref|XP_002694238.1| PREDICTED: MGC107851 protein-like [Bos taurus].
Length = 646
Score = 333 bits (853), Expect = 2e-91
Identities = 171/310 (55%), Positives = 220/310 (70%), Gaps = 2/310 (0%)
Frame = +2
Query: 185 RWFHRDLSGLDAETLLKGRGVHGSFLARPSRKNQGDFSLSVRVGDQVTHIRIQNSGDFYD 364
RWFH ++SG++AE LL G HGSFLARPS+ G F+LSVR ++VTHI+IQN+GD+YD
Sbjct: 5 RWFHPNISGVEAEQLLMSSGQHGSFLARPSKSCPGGFTLSVRRHNEVTHIKIQNTGDYYD 64
Query: 365 LYGGEKFATLTELVEYYTQQQG-VLQDRDGTIIHLKYPLNCSDPTSERWYHGHMSGGQAE 541
LYGGEKFATL ELV++YT Q G +L++R G + L++PL C DPTSERWYHGH+SG +AE
Sbjct: 65 LYGGEKFATLAELVQHYTGQHGGLLRERGGAPVELRHPLGCQDPTSERWYHGHLSGKEAE 124
Query: 542 TLLQAKGEPWTFLVRESLSQPGDFVLSVLSDQPKAGPGSPLKVTHIKVMCE-GGRYTVGG 718
LL KG P +FLVRES S+PGDFVLSVL+ Q P +VTHI + + G+Y VGG
Sbjct: 125 KLLMEKGRPGSFLVRESQSKPGDFVLSVLTQQLDRVDRQP-RVTHIMIHFQPDGKYDVGG 183
Query: 719 PETFDSLTDLVEHFKKTGIEEASGAFVYLRQPYYATRVNAADIENRVLELNQKQESEETA 898
E FD+L DLVE ++K + E SG V+LRQP ATR++AA IE+RV EL++ ++ E A
Sbjct: 184 GEQFDTLGDLVERYRKNPMVERSGVVVHLRQPLKATRISAASIESRVQELSEATDASEKA 243
Query: 899 KAGFWEEFESLQKQEVKNLHQRLEGQRPKNKSKNRYQNIFHSTQPSDPARDGTVTSLGPD 1078
K GFWEEFE LQ+QE + L+ R EGQRP+NK KNRY+NI D G D
Sbjct: 244 KQGFWEEFEMLQQQECRLLYPRKEGQRPENKPKNRYKNILPFDTTRVILHDVDDRVPGAD 303
Query: 1079 YFNPTYVKNN 1108
Y N Y++++
Sbjct: 304 YINANYIRSD 313
Score = 79.7 bits (195), Expect = 4e-15
Identities = 51/114 (44%), Positives = 66/114 (57%), Gaps = 9/114 (7%)
Frame = +2
Query: 173 PRMVRWFHRDLSGLDAETLLKGRGVHGSFLARPSRKNQGDFSLSV------RVGDQ--VT 328
P RW+H LSG +AE LL +G GSFL R S+ GDF LSV RV Q VT
Sbjct: 108 PTSERWYHGHLSGKEAEKLLMEKGRPGSFLVRESQSKPGDFVLSVLTQQLDRVDRQPRVT 167
Query: 329 HIRIQNSGD-FYDLYGGEKFATLTELVEYYTQQQGVLQDRDGTIIHLKYPLNCS 487
HI I D YD+ GGE+F TL +LVE Y ++ + +R G ++HL+ PL +
Sbjct: 168 HIMIHFQPDGKYDVGGGEQFDTLGDLVERY--RKNPMVERSGVVVHLRQPLKAT 219
Score = 72.0 bits (175), Expect = 9e-13
Identities = 46/112 (41%), Positives = 61/112 (54%), Gaps = 5/112 (4%)
Frame = +2
Query: 494 TSERWYHGHMSGGQAETLLQAKGEPWTFLVRESLSQPGDFVLSVLSDQPKAGPGSPLKVT 673
TS RW+H ++SG +AE LL + G+ +FL R S S PG F LSV +VT
Sbjct: 2 TSRRWFHPNISGVEAEQLLMSSGQHGSFLARPSKSCPGGFTLSVRRHN---------EVT 52
Query: 674 HIKVMCEGGRYTVGGPETFDSLTDLVEHFKKTG-----IEEASGAFVYLRQP 814
HIK+ G Y + G E F +L +LV+H+ TG + E GA V LR P
Sbjct: 53 HIKIQNTGDYYDLYGGEKFATLAELVQHY--TGQHGGLLRERGGAPVELRHP 102
>ref|XP_605143.5| PREDICTED: protein-tyrosine phosphatase SHP-2b-like [Bos taurus].
Length = 695
Score = 333 bits (853), Expect = 2e-91
Identities = 171/310 (55%), Positives = 220/310 (70%), Gaps = 2/310 (0%)
Frame = +2
Query: 185 RWFHRDLSGLDAETLLKGRGVHGSFLARPSRKNQGDFSLSVRVGDQVTHIRIQNSGDFYD 364
RWFH ++SG++AE LL G HGSFLARPS+ G F+LSVR ++VTHI+IQN+GD+YD
Sbjct: 5 RWFHPNISGVEAEQLLMSSGQHGSFLARPSKSCPGGFTLSVRRHNEVTHIKIQNTGDYYD 64
Query: 365 LYGGEKFATLTELVEYYTQQQG-VLQDRDGTIIHLKYPLNCSDPTSERWYHGHMSGGQAE 541
LYGGEKFATL ELV++YT Q G +L++R G + L++PL C DPTSERWYHGH+SG +AE
Sbjct: 65 LYGGEKFATLAELVQHYTGQHGGLLRERGGAPVELRHPLGCQDPTSERWYHGHLSGKEAE 124
Query: 542 TLLQAKGEPWTFLVRESLSQPGDFVLSVLSDQPKAGPGSPLKVTHIKVMCE-GGRYTVGG 718
LL KG P +FLVRES S+PGDFVLSVL+ Q P +VTHI + + G+Y VGG
Sbjct: 125 KLLMEKGRPGSFLVRESQSKPGDFVLSVLTQQLDRVDRQP-RVTHIMIHFQPDGKYDVGG 183
Query: 719 PETFDSLTDLVEHFKKTGIEEASGAFVYLRQPYYATRVNAADIENRVLELNQKQESEETA 898
E FD+L DLVE ++K + E SG V+LRQP ATR++AA IE+RV EL++ ++ E A
Sbjct: 184 GEQFDTLGDLVERYRKNPMVERSGVVVHLRQPLKATRISAASIESRVQELSEATDASEKA 243
Query: 899 KAGFWEEFESLQKQEVKNLHQRLEGQRPKNKSKNRYQNIFHSTQPSDPARDGTVTSLGPD 1078
K GFWEEFE LQ+QE + L+ R EGQRP+NK KNRY+NI D G D
Sbjct: 244 KQGFWEEFEMLQQQECRLLYPRKEGQRPENKPKNRYKNILPFDTTRVILHDVDDRVPGAD 303
Query: 1079 YFNPTYVKNN 1108
Y N Y++++
Sbjct: 304 YINANYIRSD 313
Score = 79.7 bits (195), Expect = 4e-15
Identities = 51/114 (44%), Positives = 66/114 (57%), Gaps = 9/114 (7%)
Frame = +2
Query: 173 PRMVRWFHRDLSGLDAETLLKGRGVHGSFLARPSRKNQGDFSLSV------RVGDQ--VT 328
P RW+H LSG +AE LL +G GSFL R S+ GDF LSV RV Q VT
Sbjct: 108 PTSERWYHGHLSGKEAEKLLMEKGRPGSFLVRESQSKPGDFVLSVLTQQLDRVDRQPRVT 167
Query: 329 HIRIQNSGD-FYDLYGGEKFATLTELVEYYTQQQGVLQDRDGTIIHLKYPLNCS 487
HI I D YD+ GGE+F TL +LVE Y ++ + +R G ++HL+ PL +
Sbjct: 168 HIMIHFQPDGKYDVGGGEQFDTLGDLVERY--RKNPMVERSGVVVHLRQPLKAT 219
Score = 72.0 bits (175), Expect = 9e-13
Identities = 46/112 (41%), Positives = 61/112 (54%), Gaps = 5/112 (4%)
Frame = +2
Query: 494 TSERWYHGHMSGGQAETLLQAKGEPWTFLVRESLSQPGDFVLSVLSDQPKAGPGSPLKVT 673
TS RW+H ++SG +AE LL + G+ +FL R S S PG F LSV +VT
Sbjct: 2 TSRRWFHPNISGVEAEQLLMSSGQHGSFLARPSKSCPGGFTLSVRRHN---------EVT 52
Query: 674 HIKVMCEGGRYTVGGPETFDSLTDLVEHFKKTG-----IEEASGAFVYLRQP 814
HIK+ G Y + G E F +L +LV+H+ TG + E GA V LR P
Sbjct: 53 HIKIQNTGDYYDLYGGEKFATLAELVQHY--TGQHGGLLRERGGAPVELRHP 102
>ref|NP_776850.1| 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma-1
[Bos taurus].
Length = 1291
Score = 65.9 bits (159), Expect = 7e-11
Identities = 63/215 (29%), Positives = 98/215 (45%), Gaps = 21/215 (9%)
Frame = +2
Query: 185 RWFHRDL-SGLD----AETLLKGRGVH-----GSFLARPSRKNQGDFSLSVRVGDQVTHI 334
+WFH L +G D AE LL + GSFL R S GD++LS +V H
Sbjct: 549 KWFHGKLGAGRDGRHIAERLLTEYCIETGAPDGSFLVRESETFVGDYTLSFWRNGKVQHC 608
Query: 335 RIQNSGDF----YDLYGGEKFATLTELVEYYTQQQGVLQDRDGTIIHLKYPLNCSDPT-- 496
RI + D + L F +L +L+ +Y QQ L+ + + + S+P
Sbjct: 609 RIHSRQDAGTPKFFLTDNLVFDSLYDLITHY--QQVPLRCNE-------FEMRLSEPVPQ 659
Query: 497 -----SERWYHGHMSGGQAETLLQAKGEPWTFLVRESLSQPGDFVLSVLSDQPKAGPGSP 661
S+ WYH ++ QAE +L FLVR+ ++P + +S ++
Sbjct: 660 TNAHESKEWYHASLTRAQAEHMLMRVPRDGAFLVRKR-NEPNSYAISFRAEG-------- 710
Query: 662 LKVTHIKVMCEGGRYTVGGPETFDSLTDLVEHFKK 766
K+ H +V EG +G E FDSL DL+ +++K
Sbjct: 711 -KIKHCRVQQEGQTVMLGNSE-FDSLVDLISYYEK 743
>ref|NP_001179489.1| GRB2-related adaptor protein 2 [Bos taurus].
Length = 316
Score = 62.8 bits (151), Expect = 6e-10
Identities = 39/94 (41%), Positives = 56/94 (59%), Gaps = 8/94 (8%)
Frame = +2
Query: 188 WFHRDLSGLDAETLLKGRGVHGSFLARPSRKNQGDFSLSVRVGDQVTHIRI--QNSGDFY 361
WFH LS AE+LL G+ + G F+ R S+ + GDFS+SVR D V H ++ N G+++
Sbjct: 58 WFHEGLSRHQAESLLMGKEL-GCFIIRASQSSPGDFSISVRHEDDVQHFKVMRDNKGNYF 116
Query: 362 DLYGGEKFATLTELVEYY------TQQQGVLQDR 445
EKF +L +LV+YY Q+Q L+DR
Sbjct: 117 --LWTEKFPSLNKLVDYYRKNSISKQKQIFLRDR 148
Score = 52.8 bits (125), Expect = 6e-07
Identities = 44/150 (29%), Positives = 69/150 (46%), Gaps = 1/150 (0%)
Frame = +2
Query: 353 DFYDLYGGEKFATLTELVEYYTQQQGVLQDRDGTIIHLKYPLNCSDPTSERWYHGHMSGG 532
D + G+ L+ E++ + G ++G + P N + W+H +S
Sbjct: 15 DELGFHAGDVLKILSNQGEWFKAELG---SQEGYV-----PKNFIEIEFPEWFHEGLSRH 66
Query: 533 QAETLLQAKGEPWTFLVRESLSQPGDFVLSVLSDQPKAGPGSPLKVTHIKVMCEG-GRYT 709
QAE+LL K E F++R S S PGDF +SV + V H KVM + G Y
Sbjct: 67 QAESLLMGK-ELGCFIIRASQSSPGDFSISVRHED---------DVQHFKVMRDNKGNYF 116
Query: 710 VGGPETFDSLTDLVEHFKKTGIEEASGAFV 799
+ E F SL LV++++K I + F+
Sbjct: 117 L-WTEKFPSLNKLVDYYRKNSISKQKQIFL 145
>ref|XP_002687983.1| PREDICTED: GRB2-related adaptor protein 2-like [Bos taurus].
Length = 316
Score = 62.8 bits (151), Expect = 6e-10
Identities = 39/94 (41%), Positives = 56/94 (59%), Gaps = 8/94 (8%)
Frame = +2
Query: 188 WFHRDLSGLDAETLLKGRGVHGSFLARPSRKNQGDFSLSVRVGDQVTHIRI--QNSGDFY 361
WFH LS AE+LL G+ + G F+ R S+ + GDFS+SVR D V H ++ N G+++
Sbjct: 58 WFHEGLSRHQAESLLMGKEL-GCFIIRASQSSPGDFSISVRHEDDVQHFKVMRDNKGNYF 116
Query: 362 DLYGGEKFATLTELVEYY------TQQQGVLQDR 445
EKF +L +LV+YY Q+Q L+DR
Sbjct: 117 --LWTEKFPSLNKLVDYYRKNSISKQKQIFLRDR 148
Score = 52.8 bits (125), Expect = 6e-07
Identities = 44/150 (29%), Positives = 69/150 (46%), Gaps = 1/150 (0%)
Frame = +2
Query: 353 DFYDLYGGEKFATLTELVEYYTQQQGVLQDRDGTIIHLKYPLNCSDPTSERWYHGHMSGG 532
D + G+ L+ E++ + G ++G + P N + W+H +S
Sbjct: 15 DELGFHAGDVLKILSNQGEWFKAELG---SQEGYV-----PKNFIEIEFPEWFHEGLSRH 66
Query: 533 QAETLLQAKGEPWTFLVRESLSQPGDFVLSVLSDQPKAGPGSPLKVTHIKVMCEG-GRYT 709
QAE+LL K E F++R S S PGDF +SV + V H KVM + G Y
Sbjct: 67 QAESLLMGK-ELGCFIIRASQSSPGDFSISVRHED---------DVQHFKVMRDNKGNYF 116
Query: 710 VGGPETFDSLTDLVEHFKKTGIEEASGAFV 799
+ E F SL LV++++K I + F+
Sbjct: 117 L-WTEKFPSLNKLVDYYRKNSISKQKQIFL 145
>ref|NP_001070359.1| dual adapter for phosphotyrosine and 3-phosphotyrosine and
3-phosphoinositide [Bos taurus].
Length = 280
Score = 62.4 bits (150), Expect = 7e-10
Identities = 34/96 (35%), Positives = 56/96 (58%)
Frame = +2
Query: 188 WFHRDLSGLDAETLLKGRGVHGSFLARPSRKNQGDFSLSVRVGDQVTHIRIQNSGDFYDL 367
W+H +L+ AE LL G GS+L R S + G +SLSVR D V H ++ +G +
Sbjct: 35 WYHGNLTRHAAEALLLSNGCDGSYLLRDSNERIGLYSLSVRAKDSVKHFHVEYTGYSFK- 93
Query: 368 YGGEKFATLTELVEYYTQQQGVLQDRDGTIIHLKYP 475
+G +F++L + V+++ Q ++ GT+I LK+P
Sbjct: 94 FGFNEFSSLRDFVKHFANQP-LIGSETGTLIVLKHP 128
>ref|NP_776874.1| ras GTPase-activating protein 1 [Bos taurus].
Length = 1044
Score = 57.4 bits (137), Expect = 2e-08
Identities = 32/90 (35%), Positives = 49/90 (54%)
Frame = +2
Query: 491 PTSERWYHGHMSGGQAETLLQAKGEPWTFLVRESLSQPGDFVLSVLSDQPKAGPGSPLKV 670
P + +WYHG + AE L+ G+ ++L+RES +PG FVLS LS V
Sbjct: 173 PPTNQWYHGKLDRTIAEERLRQAGKSGSYLIRESDRRPGSFVLSFLSQTN--------VV 224
Query: 671 THIKVMCEGGRYTVGGPETFDSLTDLVEHF 760
H +++ G Y +GG F SL+DL+ ++
Sbjct: 225 NHFRIIAMCGDYYIGG-RRFSSLSDLIGYY 253
Score = 53.5 bits (127), Expect = 3e-07
Identities = 37/113 (32%), Positives = 57/113 (50%), Gaps = 2/113 (1%)
Frame = +2
Query: 173 PRMVRWFHRDLSGLDAETLLKGRGVHGSFLARPSRKNQGDFSLS-VRVGDQVTHIR-IQN 346
P +W+H L AE L+ G GS+L R S + G F LS + + V H R I
Sbjct: 173 PPTNQWYHGKLDRTIAEERLRQAGKSGSYLIRESDRRPGSFVLSFLSQTNVVNHFRIIAM 232
Query: 347 SGDFYDLYGGEKFATLTELVEYYTQQQGVLQDRDGTIIHLKYPLNCSDPTSER 505
GD+Y GG +F++L++L+ YY+ +L+ L YP+ +P +R
Sbjct: 233 CGDYY--IGGRRFSSLSDLIGYYSHVSCLLKGE-----KLLYPVAPPEPVEDR 278
Score = 49.7 bits (117), Expect = 5e-06
Identities = 49/225 (21%), Positives = 94/225 (41%), Gaps = 3/225 (1%)
Frame = +2
Query: 374 GEKFATLTELVEYYTQQQGVLQDRDGTIIH--LKYPLNCSDPTSER-WYHGHMSGGQAET 544
G+ F EL + + + D G I+ ++ DP + W+HG +S +A
Sbjct: 301 GDMFIVHNELEDGWMWVTNLRTDEQGLIVEDLVEEVGREEDPHEGKIWFHGKISKQEAYN 360
Query: 545 LLQAKGEPWTFLVRESLSQPGDFVLSVLSDQPKAGPGSPLKVTHIKVMCEGGRYTVGGPE 724
LL G+ +FLVR S + PGD+ L + + + K+ + G
Sbjct: 361 LLMTVGQACSFLVRPSDNTPGDYSLYFRTSE---------NIQRFKICPTPNNQFMMGGR 411
Query: 725 TFDSLTDLVEHFKKTGIEEASGAFVYLRQPYYATRVNAADIENRVLELNQKQESEETAKA 904
++S+ D+++H++K I E YL++P ++++ LN + +E
Sbjct: 412 YYNSIGDIIDHYRKEQIVEG----YYLKEP--------VPMQDQEQVLNDAVDGKEIYNT 459
Query: 905 GFWEEFESLQKQEVKNLHQRLEGQRPKNKSKNRYQNIFHSTQPSD 1039
+ ++ K VK +G K R++N++ + SD
Sbjct: 460 IRRKTKDAFYKNIVK------KGYLLKKGKGKRWKNLYFILEGSD 498
Score = 49.7 bits (117), Expect = 5e-06
Identities = 24/80 (30%), Positives = 43/80 (53%)
Frame = +2
Query: 188 WFHRDLSGLDAETLLKGRGVHGSFLARPSRKNQGDFSLSVRVGDQVTHIRIQNSGDFYDL 367
WFH +S +A LL G SFL RPS GD+SL R + + +I + + +
Sbjct: 348 WFHGKISKQEAYNLLMTVGQACSFLVRPSDNTPGDYSLYFRTSENIQRFKICPTPNNQFM 407
Query: 368 YGGEKFATLTELVEYYTQQQ 427
GG + ++ +++++Y ++Q
Sbjct: 408 MGGRYYNSIGDIIDHYRKEQ 427
>ref|XP_589041.3| PREDICTED: 1-phosphatidylinositol-4,5-bisphosphate
phosphodiesterase gamma-2-like, partial [Bos taurus].
Length = 867
Score = 56.6 bits (135), Expect = 4e-08
Identities = 52/211 (24%), Positives = 93/211 (44%), Gaps = 17/211 (8%)
Frame = +2
Query: 185 RWFHRDLSG-LDAETLLKGR-----GVHGSFLARPSRKNQGDFSLSVRVGDQVTHIRIQN 346
+WFH+ + AE LL+ G G+FL R S D++LS +V H RI++
Sbjct: 133 KWFHKKVEKRTSAEKLLQEYCAETGGKDGTFLVRESETFPNDYTLSFWRSGRVQHCRIRS 192
Query: 347 SGD----FYDLYGGEKFATLTELVEYYTQQQGVLQDRDGTIIHLKYPLNCSDPT------ 496
+ + Y L F ++ L+++Y R+ + ++ L +DP
Sbjct: 193 TMEGGTMKYYLTDNLMFTSIYALIQHY---------RETHLRCAEFELRLTDPVPNPNPH 243
Query: 497 -SERWYHGHMSGGQAETLLQAKGEPWTFLVRESLSQPGDFVLSVLSDQPKAGPGSPLKVT 673
S+ WY+ +S G+AE +L FL+R+ +D + KV
Sbjct: 244 ESKPWYYDGLSRGEAEDMLMRIPRDGAFLIRKREG----------TDSYAITFRARGKVK 293
Query: 674 HIKVMCEGGRYTVGGPETFDSLTDLVEHFKK 766
H ++ +G + +G F+SL +LV +++K
Sbjct: 294 HCRINRDGRHFVLGTSAYFESLVELVSYYEK 324
Database: RefSeq49_BP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 17,681,374
Number of sequences in database: 33,088
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33088
Number of Hits to DB: 44,695,319
Number of extensions: 1297817
Number of successful extensions: 7841
Number of sequences better than 1.0e-05: 31
Number of HSP's gapped: 7697
Number of HSP's successfully gapped: 49
Length of query: 379
Length of database: 17,681,374
Length adjustment: 104
Effective length of query: 275
Effective length of database: 14,240,222
Effective search space: 3916061050
Effective search space used: 3916061050
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to RefSeqCP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-012859
(1139 letters)
Database: RefSeq49_CP.fasta
33,336 sequences; 18,874,504 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_543844.2| PREDICTED: similar to Tyrosine-protein phosphat... 574 e-164
Alignment gi|XP_534686.2| PREDICTED: similar to protein tyrosine phosphat... 343 2e-94
Alignment gi|XP_542998.2| PREDICTED: similar to 1-phosphatidylinositol-4,... 66 7e-11
Alignment gi|XP_535669.2| PREDICTED: similar to Dual adapter for phosphot... 63 5e-10
Alignment gi|XP_849706.1| PREDICTED: similar to GRB2-related adaptor prot... 63 5e-10
Alignment gi|XP_538362.2| PREDICTED: similar to GRB2-related adaptor prot... 63 5e-10
Alignment gi|XP_534478.2| PREDICTED: similar to src-related kinase lackin... 59 1e-08
Alignment gi|XP_536302.2| PREDICTED: similar to Ras GTPase-activating pro... 58 2e-08
Alignment gi|XP_546812.2| PREDICTED: similar to 1-phosphatidylinositol-4,... 57 3e-08
Alignment gi|XP_851972.1| PREDICTED: similar to Proto-oncogene tyrosine-p... 57 3e-08
>ref|XP_543844.2| PREDICTED: similar to Tyrosine-protein phosphatase, non-receptor type
6 (Protein-tyrosine phosphatase 1C) (PTP-1C)
(Hematopoietic cell protein-tyrosine phosphatase)
(SH-PTP1) (Protein-tyrosine phosphatase SHP-1) [Canis
familiaris].
Length = 595
Score = 574 bits (1480), Expect = e-164
Identities = 286/316 (90%), Positives = 293/316 (92%), Gaps = 2/316 (0%)
Frame = +2
Query: 179 MVRWFHRDLSGLDAETLLKGRGVHGSFLARPSRKNQGDFSLSVRVGDQVTHIRIQNSGDF 358
MVRWFHRDLSGLDAETLLKGRGVHGSFLARPSRKNQGDFSLSVRVGDQVTHIRIQNSGDF
Sbjct: 1 MVRWFHRDLSGLDAETLLKGRGVHGSFLARPSRKNQGDFSLSVRVGDQVTHIRIQNSGDF 60
Query: 359 YDLYGGEKFATLTELVEYYTQQQGVLQDRDGTIIHLKYPLNCSDPTSERWYHGHMSGGQA 538
YDLYGGEKFATLTELVEYYTQQQGVLQDRDGTIIHLKYPLNCSDPTSERWYHGHMSGGQA
Sbjct: 61 YDLYGGEKFATLTELVEYYTQQQGVLQDRDGTIIHLKYPLNCSDPTSERWYHGHMSGGQA 120
Query: 539 ETLLQAKGEPWTFLVRESLSQPGDFVLSVLSDQPKAGPGSPLKVTHIKVMCEGGRYTVGG 718
ETLLQAKGEPWTFLVRESLSQPGDFVLSVLSDQPKAG GSPL+VTHIKVMCEGGRYTVGG
Sbjct: 121 ETLLQAKGEPWTFLVRESLSQPGDFVLSVLSDQPKAGLGSPLRVTHIKVMCEGGRYTVGG 180
Query: 719 PETFDSLTDLVEHFKKTGIEEASGAFVYLRQPYYATRVNAADIENRVLELNQKQESEETA 898
ETFDSLTDLVEHFKKTGIEEASGAFVYLRQPYYATRVNAADIENRVLELN+KQESE+TA
Sbjct: 181 AETFDSLTDLVEHFKKTGIEEASGAFVYLRQPYYATRVNAADIENRVLELNKKQESEDTA 240
Query: 899 KAGFWEEFESLQKQEVKNLHQRLEGQRPKNKSKNRYQNI--FHSTQPSDPARDGTVTSLG 1072
KAGFWEEFESLQKQEVKNLHQRLEGQRP+NKSKNRY+NI F T+ RD + G
Sbjct: 241 KAGFWEEFESLQKQEVKNLHQRLEGQRPENKSKNRYKNILPFDHTRVILQGRDSNIP--G 298
Query: 1073 PDYFNPTYVKNNC*GP 1120
DY N YVKN GP
Sbjct: 299 SDYINANYVKNELLGP 314
Score = 69.3 bits (168), Expect = 6e-12
Identities = 41/111 (36%), Positives = 62/111 (55%), Gaps = 10/111 (9%)
Frame = +2
Query: 173 PRMVRWFHRDLSGLDAETLLKGRGVHGSFLARPSRKNQGDFSLSVRVGDQ---------- 322
P RW+H +SG AETLL+ +G +FL R S GDF LSV + DQ
Sbjct: 105 PTSERWYHGHMSGGQAETLLQAKGEPWTFLVRESLSQPGDFVLSV-LSDQPKAGLGSPLR 163
Query: 323 VTHIRIQNSGDFYDLYGGEKFATLTELVEYYTQQQGVLQDRDGTIIHLKYP 475
VTHI++ G Y + G E F +LT+LVE++ ++ +++ G ++L+ P
Sbjct: 164 VTHIKVMCEGGRYTVGGAETFDSLTDLVEHF--KKTGIEEASGAFVYLRQP 212
>ref|XP_534686.2| PREDICTED: similar to protein tyrosine phosphatase, non-receptor type
11 [Canis familiaris].
Length = 571
Score = 343 bits (880), Expect = 2e-94
Identities = 171/307 (55%), Positives = 220/307 (71%), Gaps = 2/307 (0%)
Frame = +2
Query: 185 RWFHRDLSGLDAETLLKGRGVHGSFLARPSRKNQGDFSLSVRVGDQVTHIRIQNSGDFYD 364
RWFH +++G++AE LL RGV GSFLARPS+ N GDF+LSVR VTHI+IQN+GD+YD
Sbjct: 5 RWFHPNITGVEAENLLLTRGVDGSFLARPSKSNPGDFTLSVRRNGAVTHIKIQNTGDYYD 64
Query: 365 LYGGEKFATLTELVEYYTQQQGVLQDRDGTIIHLKYPLNCSDPTSERWYHGHMSGGQAET 544
LYGGEKFATL ELV+YY + G L++++G +I LKYPLNC+DPTSERW+HGH+SG +AE
Sbjct: 65 LYGGEKFATLAELVQYYMEHHGQLKEKNGDVIELKYPLNCADPTSERWFHGHLSGKEAEK 124
Query: 545 LLQAKGEPWTFLVRESLSQPGDFVLSVLS--DQPKAGPGSPLKVTHIKVMCEGGRYTVGG 718
LL KG+ +FLVRES S PGDFVLSV + D+ ++ G KVTH+ + C+ +Y VGG
Sbjct: 125 LLTEKGKHGSFLVRESQSHPGDFVLSVRTGDDKGESNDGKS-KVTHVMIRCQELKYDVGG 183
Query: 719 PETFDSLTDLVEHFKKTGIEEASGAFVYLRQPYYATRVNAADIENRVLELNQKQESEETA 898
E FDSLTDLVEH+KK + E G + L+QP TR+NAA+IE+RV EL++ E+ +
Sbjct: 184 GERFDSLTDLVEHYKKNPMVETLGTVLQLKQPLNTTRINAAEIESRVRELSKLAETTDKV 243
Query: 899 KAGFWEEFESLQKQEVKNLHQRLEGQRPKNKSKNRYQNIFHSTQPSDPARDGTVTSLGPD 1078
K GFWEEFE+LQ+QE K L+ R EGQR +NK+KNRY+NI DG D
Sbjct: 244 KQGFWEEFETLQQQECKLLYSRKEGQRQENKNKNRYKNILPFDHTRVVLHDGDPNEPVSD 303
Query: 1079 YFNPTYV 1099
Y N +
Sbjct: 304 YINANII 310
Score = 93.2 bits (230), Expect = 4e-19
Identities = 52/113 (46%), Positives = 70/113 (61%), Gaps = 10/113 (8%)
Frame = +2
Query: 173 PRMVRWFHRDLSGLDAETLLKGRGVHGSFLARPSRKNQGDFSLSVRVGD----------Q 322
P RWFH LSG +AE LL +G HGSFL R S+ + GDF LSVR GD +
Sbjct: 107 PTSERWFHGHLSGKEAEKLLTEKGKHGSFLVRESQSHPGDFVLSVRTGDDKGESNDGKSK 166
Query: 323 VTHIRIQNSGDFYDLYGGEKFATLTELVEYYTQQQGVLQDRDGTIIHLKYPLN 481
VTH+ I+ YD+ GGE+F +LT+LVE+Y ++ + + GT++ LK PLN
Sbjct: 167 VTHVMIRCQELKYDVGGGERFDSLTDLVEHY--KKNPMVETLGTVLQLKQPLN 217
Score = 68.9 bits (167), Expect = 8e-12
Identities = 43/119 (36%), Positives = 65/119 (54%), Gaps = 2/119 (1%)
Frame = +2
Query: 494 TSERWYHGHMSGGQAETLLQAKGEPWTFLVRESLSQPGDFVLSVLSDQPKAGPGSPLKVT 673
TS RW+H +++G +AE LL +G +FL R S S PGDF LSV + VT
Sbjct: 2 TSRRWFHPNITGVEAENLLLTRGVDGSFLARPSKSNPGDFTLSVRRNG---------AVT 52
Query: 674 HIKVMCEGGRYTVGGPETFDSLTDLVEHFKK--TGIEEASGAFVYLRQPYYATRVNAAD 844
HIK+ G Y + G E F +L +LV+++ + ++E +G + L+ P +N AD
Sbjct: 53 HIKIQNTGDYYDLYGGEKFATLAELVQYYMEHHGQLKEKNGDVIELKYP-----LNCAD 106
>ref|XP_542998.2| PREDICTED: similar to 1-phosphatidylinositol-4,5-bisphosphate
phosphodiesterase gamma 1 (Phosphoinositide phospholipase
C) (PLC-gamma-1) (Phospholipase C-gamma-1) (PLC-II)
(PLC-148) [Canis familiaris].
Length = 1249
Score = 65.9 bits (159), Expect = 7e-11
Identities = 63/215 (29%), Positives = 98/215 (45%), Gaps = 21/215 (9%)
Frame = +2
Query: 185 RWFHRDL-SGLD----AETLLKGRGVH-----GSFLARPSRKNQGDFSLSVRVGDQVTHI 334
+WFH L +G D AE LL + GSFL R S GD++LS +V H
Sbjct: 509 KWFHGKLGAGRDGRHIAERLLTEYCIETGAPDGSFLVRESETFVGDYTLSFWRNGKVQHC 568
Query: 335 RIQNSGDF----YDLYGGEKFATLTELVEYYTQQQGVLQDRDGTIIHLKYPLNCSDPT-- 496
RI + D + L F +L +L+ +Y QQ L+ + + + S+P
Sbjct: 569 RIHSRQDAGAPKFFLTDNLVFDSLYDLITHY--QQVPLRCNE-------FEMRLSEPVPQ 619
Query: 497 -----SERWYHGHMSGGQAETLLQAKGEPWTFLVRESLSQPGDFVLSVLSDQPKAGPGSP 661
S+ WYH ++ QAE +L FLVR+ ++P + +S ++
Sbjct: 620 TNAHESKEWYHASLTRAQAEHMLMRVPRDGAFLVRKR-NEPNSYAISFRAEG-------- 670
Query: 662 LKVTHIKVMCEGGRYTVGGPETFDSLTDLVEHFKK 766
K+ H +V EG +G E FDSL DL+ +++K
Sbjct: 671 -KIKHCRVQQEGQTVMLGNSE-FDSLVDLISYYEK 703
>ref|XP_535669.2| PREDICTED: similar to Dual adapter for phosphotyrosine and
3-phosphotyrosine and 3-phosphoinositide (hDAPP1) (B
cell adapter molecule of 32 kDa) (B lymphocyte adapter
protein Bam32) [Canis familiaris].
Length = 280
Score = 63.2 bits (152), Expect = 5e-10
Identities = 34/96 (35%), Positives = 56/96 (58%)
Frame = +2
Query: 188 WFHRDLSGLDAETLLKGRGVHGSFLARPSRKNQGDFSLSVRVGDQVTHIRIQNSGDFYDL 367
W+H +L+ AE LL G GS+L R S + G +SLSVR D V H ++ +G +
Sbjct: 35 WYHGNLTRHAAEALLLSNGCDGSYLLRDSNERTGLYSLSVRAKDSVKHFHVEYTGYSFK- 93
Query: 368 YGGEKFATLTELVEYYTQQQGVLQDRDGTIIHLKYP 475
+G +F++L + V+++ Q ++ GT+I LK+P
Sbjct: 94 FGFNEFSSLKDFVKHFANQP-LIGSETGTLIVLKHP 128
>ref|XP_849706.1| PREDICTED: similar to GRB2-related adaptor protein 2 isoform 2
[Canis familiaris].
Length = 316
Score = 63.2 bits (152), Expect = 5e-10
Identities = 40/94 (42%), Positives = 55/94 (58%), Gaps = 8/94 (8%)
Frame = +2
Query: 188 WFHRDLSGLDAETLLKGRGVHGSFLARPSRKNQGDFSLSVRVGDQVTHIRI--QNSGDFY 361
WFH LS AE LL G+ V G F+ R S+ + GDFS+SVR D V H ++ N G+++
Sbjct: 58 WFHEGLSRHQAENLLMGKEV-GFFIIRASQSSPGDFSISVRHEDDVQHFKVMRDNKGNYF 116
Query: 362 DLYGGEKFATLTELVEYY------TQQQGVLQDR 445
EKF +L +LV+YY Q+Q L+DR
Sbjct: 117 --LWTEKFPSLNKLVDYYRTTSISKQKQIFLRDR 148
Score = 53.5 bits (127), Expect = 4e-07
Identities = 45/150 (30%), Positives = 68/150 (45%), Gaps = 1/150 (0%)
Frame = +2
Query: 353 DFYDLYGGEKFATLTELVEYYTQQQGVLQDRDGTIIHLKYPLNCSDPTSERWYHGHMSGG 532
D + G+ L+ E++ + G ++G + P N D W+H +S
Sbjct: 15 DELSFHTGDVLKILSNQEEWFKAELG---SQEGYV-----PKNFIDIQFPEWFHEGLSRH 66
Query: 533 QAETLLQAKGEPWTFLVRESLSQPGDFVLSVLSDQPKAGPGSPLKVTHIKVMCEG-GRYT 709
QAE LL K E F++R S S PGDF +SV + V H KVM + G Y
Sbjct: 67 QAENLLMGK-EVGFFIIRASQSSPGDFSISVRHED---------DVQHFKVMRDNKGNYF 116
Query: 710 VGGPETFDSLTDLVEHFKKTGIEEASGAFV 799
+ E F SL LV++++ T I + F+
Sbjct: 117 L-WTEKFPSLNKLVDYYRTTSISKQKQIFL 145
>ref|XP_538362.2| PREDICTED: similar to GRB2-related adaptor protein 2 isoform 1
[Canis familiaris].
Length = 212
Score = 63.2 bits (152), Expect = 5e-10
Identities = 40/94 (42%), Positives = 55/94 (58%), Gaps = 8/94 (8%)
Frame = +2
Query: 188 WFHRDLSGLDAETLLKGRGVHGSFLARPSRKNQGDFSLSVRVGDQVTHIRI--QNSGDFY 361
WFH LS AE LL G+ V G F+ R S+ + GDFS+SVR D V H ++ N G+++
Sbjct: 58 WFHEGLSRHQAENLLMGKEV-GFFIIRASQSSPGDFSISVRHEDDVQHFKVMRDNKGNYF 116
Query: 362 DLYGGEKFATLTELVEYY------TQQQGVLQDR 445
EKF +L +LV+YY Q+Q L+DR
Sbjct: 117 --LWTEKFPSLNKLVDYYRTTSISKQKQIFLRDR 148
Score = 53.5 bits (127), Expect = 4e-07
Identities = 45/150 (30%), Positives = 68/150 (45%), Gaps = 1/150 (0%)
Frame = +2
Query: 353 DFYDLYGGEKFATLTELVEYYTQQQGVLQDRDGTIIHLKYPLNCSDPTSERWYHGHMSGG 532
D + G+ L+ E++ + G ++G + P N D W+H +S
Sbjct: 15 DELSFHTGDVLKILSNQEEWFKAELG---SQEGYV-----PKNFIDIQFPEWFHEGLSRH 66
Query: 533 QAETLLQAKGEPWTFLVRESLSQPGDFVLSVLSDQPKAGPGSPLKVTHIKVMCEG-GRYT 709
QAE LL K E F++R S S PGDF +SV + V H KVM + G Y
Sbjct: 67 QAENLLMGK-EVGFFIIRASQSSPGDFSISVRHED---------DVQHFKVMRDNKGNYF 116
Query: 710 VGGPETFDSLTDLVEHFKKTGIEEASGAFV 799
+ E F SL LV++++ T I + F+
Sbjct: 117 L-WTEKFPSLNKLVDYYRTTSISKQKQIFL 145
>ref|XP_534478.2| PREDICTED: similar to src-related kinase lacking C-terminal
regulatory tyrosine and N-terminal myristylation sites
[Canis familiaris].
Length = 629
Score = 58.5 bits (140), Expect = 1e-08
Identities = 36/97 (37%), Positives = 47/97 (48%), Gaps = 4/97 (4%)
Frame = +2
Query: 137 HLLACTPSPPGHPRMVR---WFHRDLSGLDAETLLKG-RGVHGSFLARPSRKNQGDFSLS 304
HL P P P + W+ +S A+ LL G+FL RPS + GD+SLS
Sbjct: 238 HLARAAPEPEPEPEPLPDRPWYFSGISRARAQQLLLSPANAPGAFLVRPSESSHGDYSLS 297
Query: 305 VRVGDQVTHIRIQNSGDFYDLYGGEKFATLTELVEYY 415
VR +V H RI + D L G F +L EL+ YY
Sbjct: 298 VRAQAKVRHYRISAAADGLYLQKGRLFPSLEELLAYY 334
>ref|XP_536302.2| PREDICTED: similar to Ras GTPase-activating protein 1
(GTPase-activating protein) (GAP) (Ras p21 protein
activator) (p120GAP) (RasGAP) [Canis familiaris].
Length = 1127
Score = 57.8 bits (138), Expect = 2e-08
Identities = 32/90 (35%), Positives = 49/90 (54%)
Frame = +2
Query: 491 PTSERWYHGHMSGGQAETLLQAKGEPWTFLVRESLSQPGDFVLSVLSDQPKAGPGSPLKV 670
P + +WYHG + AE L+ G+ ++L+RES +PG FVLS LS V
Sbjct: 256 PPTNQWYHGKLDRTIAEERLRQAGKSGSYLIRESDRRPGSFVLSFLSQTS--------VV 307
Query: 671 THIKVMCEGGRYTVGGPETFDSLTDLVEHF 760
H +++ G Y +GG F SL+DL+ ++
Sbjct: 308 NHFRIIAMCGDYYIGG-RRFSSLSDLIGYY 336
Score = 53.1 bits (126), Expect = 5e-07
Identities = 37/113 (32%), Positives = 56/113 (49%), Gaps = 2/113 (1%)
Frame = +2
Query: 173 PRMVRWFHRDLSGLDAETLLKGRGVHGSFLARPSRKNQGDFSLS-VRVGDQVTHIR-IQN 346
P +W+H L AE L+ G GS+L R S + G F LS + V H R I
Sbjct: 256 PPTNQWYHGKLDRTIAEERLRQAGKSGSYLIRESDRRPGSFVLSFLSQTSVVNHFRIIAM 315
Query: 347 SGDFYDLYGGEKFATLTELVEYYTQQQGVLQDRDGTIIHLKYPLNCSDPTSER 505
GD+Y GG +F++L++L+ YY+ +L+ L YP+ +P +R
Sbjct: 316 CGDYY--IGGRRFSSLSDLIGYYSHVSCLLKGE-----KLLYPVAPPEPVEDR 361
Score = 49.7 bits (117), Expect = 5e-06
Identities = 49/225 (21%), Positives = 95/225 (42%), Gaps = 3/225 (1%)
Frame = +2
Query: 374 GEKFATLTELVEYYTQQQGVLQDRDGTIIH--LKYPLNCSDPTSER-WYHGHMSGGQAET 544
G+ F EL + + + D G I+ ++ DP + W+HG +S +A
Sbjct: 384 GDMFIVHNELEDGWMWVTNLRTDEQGLIVEDLVEEVGREEDPHEGKIWFHGKISKQEAYN 443
Query: 545 LLQAKGEPWTFLVRESLSQPGDFVLSVLSDQPKAGPGSPLKVTHIKVMCEGGRYTVGGPE 724
LL G+ +FLVR S + PGD+ L +++ + K+ + G
Sbjct: 444 LLMTVGQVCSFLVRPSDNTPGDYSLYFRTNE---------NIQRFKICPTPNNQFMMGGR 494
Query: 725 TFDSLTDLVEHFKKTGIEEASGAFVYLRQPYYATRVNAADIENRVLELNQKQESEETAKA 904
++S+ D+++H++K I E YL++P ++++ LN + +E
Sbjct: 495 YYNSIGDIIDHYRKEQIVEG----YYLKEP--------VPMQDQEQVLNDTVDGKEIYNT 542
Query: 905 GFWEEFESLQKQEVKNLHQRLEGQRPKNKSKNRYQNIFHSTQPSD 1039
+ ++ K VK +G K R++N++ + SD
Sbjct: 543 IRRKTKDAFYKNIVK------KGYLLKKGKGKRWKNLYFILEGSD 581
Score = 49.3 bits (116), Expect = 7e-06
Identities = 24/80 (30%), Positives = 43/80 (53%)
Frame = +2
Query: 188 WFHRDLSGLDAETLLKGRGVHGSFLARPSRKNQGDFSLSVRVGDQVTHIRIQNSGDFYDL 367
WFH +S +A LL G SFL RPS GD+SL R + + +I + + +
Sbjct: 431 WFHGKISKQEAYNLLMTVGQVCSFLVRPSDNTPGDYSLYFRTNENIQRFKICPTPNNQFM 490
Query: 368 YGGEKFATLTELVEYYTQQQ 427
GG + ++ +++++Y ++Q
Sbjct: 491 MGGRYYNSIGDIIDHYRKEQ 510
>ref|XP_546812.2| PREDICTED: similar to 1-phosphatidylinositol-4,5-bisphosphate
phosphodiesterase gamma 2 (Phosphoinositide phospholipase
C) (PLC-gamma-2) (Phospholipase C-gamma-2) (PLC-IV)
[Canis familiaris].
Length = 1252
Score = 57.0 bits (136), Expect = 3e-08
Identities = 52/206 (25%), Positives = 91/206 (44%), Gaps = 13/206 (6%)
Frame = +2
Query: 188 WFHRDLSG-LDAETLLKGR-----GVHGSFLARPSRKNQGDFSLSVRVGDQVTHIRIQNS 349
WFH+ + AE LL+ G G+FL R S+ D++LS +V H RI+++
Sbjct: 532 WFHKKVEKRTSAEKLLQEYCAETGGKDGTFLVRESKTFPNDYTLSFWRSGRVQHCRIRST 591
Query: 350 GDFYDLYGGEKFATLTELVEYYTQQQGVLQDRDGTIIHLKYPLNCSDPT-------SERW 508
+ GG LT+ V + + + R+ + ++ L +DP S+ W
Sbjct: 592 -----VEGGTMKYFLTDNVMFTSIYALIQHYRETHLRCAEFELRLTDPVPNPNPHESKPW 646
Query: 509 YHGHMSGGQAETLLQAKGEPWTFLVRESLSQPGDFVLSVLSDQPKAGPGSPLKVTHIKVM 688
Y+ +S G+AE +L FL+R +D + KV H ++
Sbjct: 647 YYDGLSRGEAEDMLMRVPRDGAFLIRRREG----------TDSYAITFRARGKVKHCRIH 696
Query: 689 CEGGRYTVGGPETFDSLTDLVEHFKK 766
+G + +G F+SL +LV +++K
Sbjct: 697 RDGQHFVLGTSAYFESLVELVSYYEK 722
>ref|XP_851972.1| PREDICTED: similar to Proto-oncogene tyrosine-protein kinase LCK
(P56-LCK) (LSK) (T cell-specific protein-tyrosine
kinase) isoform 2 [Canis familiaris].
Length = 509
Score = 57.0 bits (136), Expect = 3e-08
Identities = 45/115 (39%), Positives = 51/115 (44%), Gaps = 8/115 (6%)
Frame = +2
Query: 188 WFHRDLSGLDAETLLKGRG-VHGSFLARPSRKNQGDFSLSVRVGDQ-----VTHIRIQN- 346
WF ++LS DAE L G HGSFL R S G FSLSVR DQ V H +I+N
Sbjct: 127 WFFKNLSRKDAERQLLAPGNTHGSFLIRESESTAGSFSLSVRDFDQNQGEVVKHYKIRNL 186
Query: 347 -SGDFYDLYGGEKFATLTELVEYYTQQQGVLQDRDGTIIHLKYPLNCSDPTSERW 508
G FY + F L ELV +YT DG L P P W
Sbjct: 187 DKGGFY-ISPRITFPGLHELVRHYTNSS------DGLCTRLSRPCQTQKPQKPWW 234
Database: RefSeq49_CP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,874,504
Number of sequences in database: 33,336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33336
Number of Hits to DB: 46,696,376
Number of extensions: 1342596
Number of successful extensions: 8035
Number of sequences better than 1.0e-05: 37
Number of HSP's gapped: 7896
Number of HSP's successfully gapped: 54
Length of query: 379
Length of database: 18,874,504
Length adjustment: 104
Effective length of query: 275
Effective length of database: 15,407,560
Effective search space: 4237079000
Effective search space used: 4237079000
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to RefSeqSP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-012859
(1139 letters)
Database: RefSeq49_SP.fasta
24,897 sequences; 11,343,932 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_003355638.1| PREDICTED: tyrosine-protein phosphatase non-... 582 e-166
Alignment gi|XP_003359164.1| PREDICTED: tyrosine-protein phosphatase non-... 287 9e-78
Alignment gi|XP_003361926.1| PREDICTED: tyrosine-protein phosphatase non-... 249 3e-66
Alignment gi|XP_003356160.1| PREDICTED: agrin-like [Sus scrofa]. 201 5e-52
Alignment gi|XP_003129348.2| PREDICTED: dual adapter for phosphotyrosine ... 71 1e-12
Alignment gi|XP_003134490.1| PREDICTED: 1-phosphatidylinositol-4,5-bispho... 66 3e-11
Alignment gi|XP_003126054.1| PREDICTED: GRB2-related adapter protein 2-li... 64 1e-10
Alignment gi|XP_003126048.1| PREDICTED: GRB2-related adapter protein 2-li... 64 1e-10
Alignment gi|XP_003354255.1| PREDICTED: ras GTPase-activating protein 1-l... 57 1e-08
Alignment gi|XP_003356350.1| PREDICTED: tyrosine-protein kinase Lck-like ... 57 2e-08
>ref|XP_003355638.1| PREDICTED: tyrosine-protein phosphatase non-receptor type 6 [Sus
scrofa].
Length = 595
Score = 582 bits (1500), Expect = e-166
Identities = 289/316 (91%), Positives = 295/316 (93%), Gaps = 2/316 (0%)
Frame = +2
Query: 179 MVRWFHRDLSGLDAETLLKGRGVHGSFLARPSRKNQGDFSLSVRVGDQVTHIRIQNSGDF 358
MVRWFHRDLSGLDAETLLKGRGVHGSFLARPSRKNQGDFSLSVRVGDQVTHIRIQNSGDF
Sbjct: 1 MVRWFHRDLSGLDAETLLKGRGVHGSFLARPSRKNQGDFSLSVRVGDQVTHIRIQNSGDF 60
Query: 359 YDLYGGEKFATLTELVEYYTQQQGVLQDRDGTIIHLKYPLNCSDPTSERWYHGHMSGGQA 538
YDLYGGEKFATLTELVEYYTQQQGVLQDRDGTIIHLKYPLNCSDPTSERWYHGHMSGGQA
Sbjct: 61 YDLYGGEKFATLTELVEYYTQQQGVLQDRDGTIIHLKYPLNCSDPTSERWYHGHMSGGQA 120
Query: 539 ETLLQAKGEPWTFLVRESLSQPGDFVLSVLSDQPKAGPGSPLKVTHIKVMCEGGRYTVGG 718
ETLLQAKGEPWTFLVRESLSQPGDFVLSVLSDQPKAGPGSPLKVTHIKVMCEGGRYTVGG
Sbjct: 121 ETLLQAKGEPWTFLVRESLSQPGDFVLSVLSDQPKAGPGSPLKVTHIKVMCEGGRYTVGG 180
Query: 719 PETFDSLTDLVEHFKKTGIEEASGAFVYLRQPYYATRVNAADIENRVLELNQKQESEETA 898
PETFDSLTDLVEHFKKTGIEEASGAFVYLRQPYYATRVNAADIENRVLELN+KQESEETA
Sbjct: 181 PETFDSLTDLVEHFKKTGIEEASGAFVYLRQPYYATRVNAADIENRVLELNKKQESEETA 240
Query: 899 KAGFWEEFESLQKQEVKNLHQRLEGQRPKNKSKNRYQNI--FHSTQPSDPARDGTVTSLG 1072
KAGFWEEFESLQKQEVKNLHQRLEGQRP+NKSKNRY+NI F ++ RD + G
Sbjct: 241 KAGFWEEFESLQKQEVKNLHQRLEGQRPENKSKNRYKNILPFDHSRVILQGRDSNIP--G 298
Query: 1073 PDYFNPTYVKNNC*GP 1120
DY N YVKN GP
Sbjct: 299 SDYINANYVKNKLLGP 314
Score = 68.6 bits (166), Expect = 6e-12
Identities = 41/111 (36%), Positives = 62/111 (55%), Gaps = 10/111 (9%)
Frame = +2
Query: 173 PRMVRWFHRDLSGLDAETLLKGRGVHGSFLARPSRKNQGDFSLSVRVGDQ---------- 322
P RW+H +SG AETLL+ +G +FL R S GDF LSV + DQ
Sbjct: 105 PTSERWYHGHMSGGQAETLLQAKGEPWTFLVRESLSQPGDFVLSV-LSDQPKAGPGSPLK 163
Query: 323 VTHIRIQNSGDFYDLYGGEKFATLTELVEYYTQQQGVLQDRDGTIIHLKYP 475
VTHI++ G Y + G E F +LT+LVE++ ++ +++ G ++L+ P
Sbjct: 164 VTHIKVMCEGGRYTVGGPETFDSLTDLVEHF--KKTGIEEASGAFVYLRQP 212
>ref|XP_003359164.1| PREDICTED: tyrosine-protein phosphatase non-receptor type 11 [Sus
scrofa].
Length = 552
Score = 287 bits (734), Expect = 9e-78
Identities = 143/261 (54%), Positives = 185/261 (70%), Gaps = 2/261 (0%)
Frame = +2
Query: 323 VTHIRIQNSGDFYDLYGGEKFATLTELVEYYTQQQGVLQDRDGTIIHLKYPLNCSDPTSE 502
VTHI+IQN+GD+YDLYGGEKFATL ELV+YY + G L++++G +I LKYPLNC+DPTSE
Sbjct: 10 VTHIKIQNTGDYYDLYGGEKFATLAELVQYYMEHHGQLKEKNGDVIELKYPLNCADPTSE 69
Query: 503 RWYHGHMSGGQAETLLQAKGEPWTFLVRESLSQPGDFVLSVLS--DQPKAGPGSPLKVTH 676
RW+HGH+SG +AE LL KG+ +FLVRES S PGDFVLSV + D+ ++ G KVTH
Sbjct: 70 RWFHGHLSGKEAEKLLTEKGKHGSFLVRESQSHPGDFVLSVRTGDDKGESNDGKS-KVTH 128
Query: 677 IKVMCEGGRYTVGGPETFDSLTDLVEHFKKTGIEEASGAFVYLRQPYYATRVNAADIENR 856
+ + C+ +Y VGG E FDSLTDLVEH+KK + E G + L+QP TR+NAA+IE+R
Sbjct: 129 VMIRCQELKYDVGGGERFDSLTDLVEHYKKNPMVETLGTVLQLKQPLNTTRINAAEIESR 188
Query: 857 VLELNQKQESEETAKAGFWEEFESLQKQEVKNLHQRLEGQRPKNKSKNRYQNIFHSTQPS 1036
V EL++ E+ + K GFWEEFE+LQ+QE K L+ R EGQR +NK+KNRY+NI
Sbjct: 189 VRELSKLAETTDKVKQGFWEEFETLQQQECKLLYSRKEGQRQENKNKNRYKNILPFDHTR 248
Query: 1037 DPARDGTVTSLGPDYFNPTYV 1099
DG DY N +
Sbjct: 249 VVLHDGDPNEPVSDYINANII 269
Score = 93.2 bits (230), Expect = 2e-19
Identities = 52/113 (46%), Positives = 70/113 (61%), Gaps = 10/113 (8%)
Frame = +2
Query: 173 PRMVRWFHRDLSGLDAETLLKGRGVHGSFLARPSRKNQGDFSLSVRVGD----------Q 322
P RWFH LSG +AE LL +G HGSFL R S+ + GDF LSVR GD +
Sbjct: 66 PTSERWFHGHLSGKEAEKLLTEKGKHGSFLVRESQSHPGDFVLSVRTGDDKGESNDGKSK 125
Query: 323 VTHIRIQNSGDFYDLYGGEKFATLTELVEYYTQQQGVLQDRDGTIIHLKYPLN 481
VTH+ I+ YD+ GGE+F +LT+LVE+Y ++ + + GT++ LK PLN
Sbjct: 126 VTHVMIRCQELKYDVGGGERFDSLTDLVEHY--KKNPMVETLGTVLQLKQPLN 176
>ref|XP_003361926.1| PREDICTED: tyrosine-protein phosphatase non-receptor type 11-like
[Sus scrofa].
Length = 477
Score = 249 bits (635), Expect = 3e-66
Identities = 140/285 (49%), Positives = 176/285 (61%), Gaps = 3/285 (1%)
Frame = +2
Query: 263 ARPSRKNQGDFSLSVRVGDQVTHIRIQNSGDFYDLYGGEKFATLTELVEYYTQQQGVLQD 442
ARPS+ G F+LSVR D+VTHI+IQ++GD+YDLYGGEKFATL ELV++YT Q
Sbjct: 14 ARPSQSCPGGFTLSVRRHDEVTHIKIQSTGDYYDLYGGEKFATLAELVQHYTGQ------ 67
Query: 443 RDGTIIHLKYPLNCSDPTSERWYHGHMSGGQAETLLQAKGEPWTFLVRESLSQPGDFVLS 622
WYHGH+SG +AE LL KG P +FLVRES S+PGDFVLS
Sbjct: 68 ---------------------WYHGHLSGKEAEKLLTEKGRPGSFLVRESQSKPGDFVLS 106
Query: 623 VLS---DQPKAGPGSPLKVTHIKVMCEGGRYTVGGPETFDSLTDLVEHFKKTGIEEASGA 793
VL+ D+P+ G+Y VGG E FD+L DLVEH++K+ + E SGA
Sbjct: 107 VLTQLLDKPE------------------GKYDVGGGEQFDTLGDLVEHYRKSPMVERSGA 148
Query: 794 FVYLRQPYYATRVNAADIENRVLELNQKQESEETAKAGFWEEFESLQKQEVKNLHQRLEG 973
V+L QP ATR+ AA IE+RV ELN+ ++ E AK GFWEEFE LQ+QE + LH R EG
Sbjct: 149 MVHLVQPLKATRIKAASIESRVQELNKVMDASEKAKQGFWEEFELLQQQECQLLHPRREG 208
Query: 974 QRPKNKSKNRYQNIFHSTQPSDPARDGTVTSLGPDYFNPTYVKNN 1108
QR +NK KNRY+NI RD G DY N Y++++
Sbjct: 209 QRLENKPKNRYKNILPFDTTRVVLRDVDKNVPGADYINANYIRSD 253
Score = 71.6 bits (174), Expect = 7e-13
Identities = 42/101 (41%), Positives = 61/101 (60%)
Frame = +2
Query: 185 RWFHRDLSGLDAETLLKGRGVHGSFLARPSRKNQGDFSLSVRVGDQVTHIRIQNSGDFYD 364
+W+H LSG +AE LL +G GSFL R S+ GDF LSV +T + + G YD
Sbjct: 67 QWYHGHLSGKEAEKLLTEKGRPGSFLVRESQSKPGDFVLSV-----LTQLLDKPEGK-YD 120
Query: 365 LYGGEKFATLTELVEYYTQQQGVLQDRDGTIIHLKYPLNCS 487
+ GGE+F TL +LVE+Y ++ + +R G ++HL PL +
Sbjct: 121 VGGGEQFDTLGDLVEHY--RKSPMVERSGAMVHLVQPLKAT 159
>ref|XP_003356160.1| PREDICTED: agrin-like [Sus scrofa].
Length = 1015
Score = 201 bits (512), Expect = 5e-52
Identities = 108/203 (53%), Positives = 136/203 (66%), Gaps = 1/203 (0%)
Frame = +2
Query: 497 SERWYHGHMSGGQAETLLQAKGEPWTFLVRESLSQPGDFVLSVLSDQPKAGPGSPLKVTH 676
+ERWYHGH+SG +AE LL KG P +FLVRES S+PGDFVLSVL+ P +VTH
Sbjct: 639 AERWYHGHLSGKEAEKLLTEKGRPGSFLVRESQSKPGDFVLSVLTQLLDKADCQP-RVTH 697
Query: 677 IKVMCEG-GRYTVGGPETFDSLTDLVEHFKKTGIEEASGAFVYLRQPYYATRVNAADIEN 853
I++ + G+Y VGG E FD+L DLVEH++K+ + E SGA V+L QP ATR+ AA IE+
Sbjct: 698 IRIHFQPEGKYDVGGGEQFDTLGDLVEHYRKSPMVERSGAMVHLGQPLKATRIKAASIES 757
Query: 854 RVLELNQKQESEETAKAGFWEEFESLQKQEVKNLHQRLEGQRPKNKSKNRYQNIFHSTQP 1033
RV ELN+ ++ E AK GFWEEFE LQ+QE + LH R EGQR +NK KNRY+NI
Sbjct: 758 RVQELNKVMDASEKAKQGFWEEFELLQQQECQLLHPRREGQRLENKPKNRYKNILPFDTT 817
Query: 1034 SDPARDGTVTSLGPDYFNPTYVK 1102
RD G DY N Y++
Sbjct: 818 RVVLRDVDKNVPGADYINANYIR 840
Score = 77.4 bits (189), Expect = 1e-14
Identities = 49/111 (44%), Positives = 65/111 (58%), Gaps = 10/111 (9%)
Frame = +2
Query: 185 RWFHRDLSGLDAETLLKGRGVHGSFLARPSRKNQGDFSLSVRV--------GDQVTHIRI 340
RW+H LSG +AE LL +G GSFL R S+ GDF LSV +VTHIRI
Sbjct: 641 RWYHGHLSGKEAEKLLTEKGRPGSFLVRESQSKPGDFVLSVLTQLLDKADCQPRVTHIRI 700
Query: 341 --QNSGDFYDLYGGEKFATLTELVEYYTQQQGVLQDRDGTIIHLKYPLNCS 487
Q G YD+ GGE+F TL +LVE+Y ++ + +R G ++HL PL +
Sbjct: 701 HFQPEGK-YDVGGGEQFDTLGDLVEHY--RKSPMVERSGAMVHLGQPLKAT 748
>ref|XP_003129348.2| PREDICTED: dual adapter for phosphotyrosine and 3-phosphotyrosine
and 3-phosphoinositide-like [Sus scrofa].
Length = 458
Score = 70.9 bits (172), Expect = 1e-12
Identities = 71/253 (28%), Positives = 105/253 (41%), Gaps = 28/253 (11%)
Frame = +2
Query: 143 LACTPSPPGHPRMVRWFHRDLSGLDAETLLKGRGVHGSFLARPSRKNQGDFSLSVR---- 310
LA P PG RW+H +L+ AE LL G GS+L R S + G +SLSVR
Sbjct: 82 LADLPHFPG-----RWYHGNLTRHAAEALLLSNGRDGSYLLRDSNEKTGLYSLSVRGPLT 136
Query: 311 ----VGDQVTHIRIQNSGDFYDLYGGEKFATLTELVEYYTQQQGVLQDRDGTIIHLKYPL 478
G + + +SG + L G + A ++ + D + P
Sbjct: 137 IRGVTGYLSASVTLASSGGLHVL-GSQAAAPGSDW-----------RSEDSHPLLRLSPH 184
Query: 479 NCSDPTSE-------------------RWYHGHMSGGQAETLLQAKGEPWTFLVRESLSQ 601
+CS PT + RWYHG+++ AE LL + G ++L+R+S +
Sbjct: 185 SCSSPTPQPRTAEPFVLSTLARIFTWLRWYHGNLTRHAAEALLLSNGRDGSYLLRDSNEK 244
Query: 602 PGDFVLSVLSDQPKAGPGSPLKVTHIKVMCEGGRYTVGGPETFDSLTDLVEHF-KKTGIE 778
G + LSV + V H V G G E F S+ D V+HF + I
Sbjct: 245 TGLYSLSVRAKD---------SVKHFHVEYTGYSLKFGFNE-FSSVKDFVKHFANQPLIG 294
Query: 779 EASGAFVYLRQPY 817
+G + L+ PY
Sbjct: 295 SETGTLIVLKHPY 307
>ref|XP_003134490.1| PREDICTED: 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase
gamma-1-like [Sus scrofa].
Length = 1374
Score = 66.2 bits (160), Expect = 3e-11
Identities = 64/215 (29%), Positives = 98/215 (45%), Gaps = 21/215 (9%)
Frame = +2
Query: 185 RWFHRDL-SGLD----AETLLKGRGVH-----GSFLARPSRKNQGDFSLSVRVGDQVTHI 334
+WFH L +G D AE LL + GSFL R S GD++LS +V H
Sbjct: 632 KWFHGKLGAGRDGRHIAERLLTEYCIETGAPDGSFLVRESETFVGDYTLSFWRNGKVQHC 691
Query: 335 RIQNSGDF----YDLYGGEKFATLTELVEYYTQQQGVLQDRDGTIIHLKYPLNCSDPT-- 496
RI + D + L F +L +L+ +Y QQ L+ + + + S+P
Sbjct: 692 RIHSRQDAGTPKFFLTDNLVFDSLYDLITHY--QQVPLRCNE-------FEMRLSEPVPQ 742
Query: 497 -----SERWYHGHMSGGQAETLLQAKGEPWTFLVRESLSQPGDFVLSVLSDQPKAGPGSP 661
S+ WYH ++ QAE +L FLVR+ ++P + +S ++
Sbjct: 743 TNAHESKEWYHASLTRAQAEHMLMRVPRDGAFLVRKR-NEPNSYAISFRAEG-------- 793
Query: 662 LKVTHIKVMCEGGRYTVGGPETFDSLTDLVEHFKK 766
K+ H +V EG +G E FDSL DLV +++K
Sbjct: 794 -KIKHCRVQQEGQTVMLGNSE-FDSLVDLVSYYEK 826
>ref|XP_003126054.1| PREDICTED: GRB2-related adapter protein 2-like [Sus scrofa].
Length = 320
Score = 64.3 bits (155), Expect = 1e-10
Identities = 40/94 (42%), Positives = 56/94 (59%), Gaps = 8/94 (8%)
Frame = +2
Query: 188 WFHRDLSGLDAETLLKGRGVHGSFLARPSRKNQGDFSLSVRVGDQVTHIRI--QNSGDFY 361
WFH LS AE+LL G+ V G F+ R S+ + GDFS+SVR D V H ++ N G+++
Sbjct: 58 WFHEGLSRHQAESLLMGKDV-GCFIIRASQSSPGDFSISVRHEDDVQHFKVMRDNKGNYF 116
Query: 362 DLYGGEKFATLTELVEYY------TQQQGVLQDR 445
EKF +L +LV+YY Q+Q L+DR
Sbjct: 117 --LWTEKFPSLNKLVDYYRTTSISKQKQIFLRDR 148
Score = 53.5 bits (127), Expect = 2e-07
Identities = 45/155 (29%), Positives = 70/155 (45%), Gaps = 1/155 (0%)
Frame = +2
Query: 338 IQNSGDFYDLYGGEKFATLTELVEYYTQQQGVLQDRDGTIIHLKYPLNCSDPTSERWYHG 517
I + D G+ L+ E++ + G ++G + P N D W+H
Sbjct: 10 IASGEDELSFQAGDVLKILSNQEEWFKAELG---SQEGYV-----PKNFIDLEFPEWFHE 61
Query: 518 HMSGGQAETLLQAKGEPWTFLVRESLSQPGDFVLSVLSDQPKAGPGSPLKVTHIKVMCEG 697
+S QAE+LL K + F++R S S PGDF +SV + V H KVM +
Sbjct: 62 GLSRHQAESLLMGK-DVGCFIIRASQSSPGDFSISVRHED---------DVQHFKVMRDN 111
Query: 698 -GRYTVGGPETFDSLTDLVEHFKKTGIEEASGAFV 799
G Y + E F SL LV++++ T I + F+
Sbjct: 112 KGNYFL-WTEKFPSLNKLVDYYRTTSISKQKQIFL 145
>ref|XP_003126048.1| PREDICTED: GRB2-related adapter protein 2-like [Sus scrofa].
Length = 320
Score = 64.3 bits (155), Expect = 1e-10
Identities = 40/94 (42%), Positives = 56/94 (59%), Gaps = 8/94 (8%)
Frame = +2
Query: 188 WFHRDLSGLDAETLLKGRGVHGSFLARPSRKNQGDFSLSVRVGDQVTHIRI--QNSGDFY 361
WFH LS AE+LL G+ V G F+ R S+ + GDFS+SVR D V H ++ N G+++
Sbjct: 58 WFHEGLSRHQAESLLMGKDV-GCFIIRASQSSPGDFSISVRHEDDVQHFKVMRDNKGNYF 116
Query: 362 DLYGGEKFATLTELVEYY------TQQQGVLQDR 445
EKF +L +LV+YY Q+Q L+DR
Sbjct: 117 --LWTEKFPSLNKLVDYYRTTSISKQKQIFLRDR 148
Score = 53.5 bits (127), Expect = 2e-07
Identities = 45/155 (29%), Positives = 70/155 (45%), Gaps = 1/155 (0%)
Frame = +2
Query: 338 IQNSGDFYDLYGGEKFATLTELVEYYTQQQGVLQDRDGTIIHLKYPLNCSDPTSERWYHG 517
I + D G+ L+ E++ + G ++G + P N D W+H
Sbjct: 10 IASGEDELSFQAGDVLKILSNQEEWFKAELG---SQEGYV-----PKNFIDIEFPEWFHE 61
Query: 518 HMSGGQAETLLQAKGEPWTFLVRESLSQPGDFVLSVLSDQPKAGPGSPLKVTHIKVMCEG 697
+S QAE+LL K + F++R S S PGDF +SV + V H KVM +
Sbjct: 62 GLSRHQAESLLMGK-DVGCFIIRASQSSPGDFSISVRHED---------DVQHFKVMRDN 111
Query: 698 -GRYTVGGPETFDSLTDLVEHFKKTGIEEASGAFV 799
G Y + E F SL LV++++ T I + F+
Sbjct: 112 KGNYFL-WTEKFPSLNKLVDYYRTTSISKQKQIFL 145
>ref|XP_003354255.1| PREDICTED: ras GTPase-activating protein 1-like [Sus scrofa].
Length = 1040
Score = 57.4 bits (137), Expect = 1e-08
Identities = 32/90 (35%), Positives = 49/90 (54%)
Frame = +2
Query: 491 PTSERWYHGHMSGGQAETLLQAKGEPWTFLVRESLSQPGDFVLSVLSDQPKAGPGSPLKV 670
P + +WYHG + AE L+ G+ ++L+RES +PG FVLS LS V
Sbjct: 169 PPTNQWYHGKLDRTIAEERLRQAGKSGSYLIRESDRRPGSFVLSFLSQTN--------VV 220
Query: 671 THIKVMCEGGRYTVGGPETFDSLTDLVEHF 760
H +++ G Y +GG F SL+DL+ ++
Sbjct: 221 NHFRIIAMCGDYYIGG-RRFSSLSDLIGYY 249
Score = 53.5 bits (127), Expect = 2e-07
Identities = 37/113 (32%), Positives = 57/113 (50%), Gaps = 2/113 (1%)
Frame = +2
Query: 173 PRMVRWFHRDLSGLDAETLLKGRGVHGSFLARPSRKNQGDFSLS-VRVGDQVTHIR-IQN 346
P +W+H L AE L+ G GS+L R S + G F LS + + V H R I
Sbjct: 169 PPTNQWYHGKLDRTIAEERLRQAGKSGSYLIRESDRRPGSFVLSFLSQTNVVNHFRIIAM 228
Query: 347 SGDFYDLYGGEKFATLTELVEYYTQQQGVLQDRDGTIIHLKYPLNCSDPTSER 505
GD+Y GG +F++L++L+ YY+ +L+ L YP+ +P +R
Sbjct: 229 CGDYY--IGGRRFSSLSDLIGYYSHVSCLLKGE-----KLLYPVAPPEPVEDR 274
Score = 50.4 bits (119), Expect = 2e-06
Identities = 49/225 (21%), Positives = 96/225 (42%), Gaps = 3/225 (1%)
Frame = +2
Query: 374 GEKFATLTELVEYYTQQQGVLQDRDGTIIH--LKYPLNCSDPTSER-WYHGHMSGGQAET 544
G+ F EL + + + D G I+ ++ DP + W+HG +S +A
Sbjct: 297 GDMFIVHNELEDGWMWVTNLRTDEQGLIVEDLVEEVGREEDPHEGKIWFHGKISKQEAYN 356
Query: 545 LLQAKGEPWTFLVRESLSQPGDFVLSVLSDQPKAGPGSPLKVTHIKVMCEGGRYTVGGPE 724
LL G+ +FLVR S + PGD+ L +++ + K+ + G
Sbjct: 357 LLMTVGQVCSFLVRPSDNTPGDYSLYFRTNE---------NIQRFKICPTPNNQFMMGGR 407
Query: 725 TFDSLTDLVEHFKKTGIEEASGAFVYLRQPYYATRVNAADIENRVLELNQKQESEETAKA 904
++S+ D+++H++K I E YL++P ++++ LN+ + +E
Sbjct: 408 YYNSIGDIIDHYRKEQIVEG----YYLKEP--------VPMQDQEQVLNETVDGKEIYNT 455
Query: 905 GFWEEFESLQKQEVKNLHQRLEGQRPKNKSKNRYQNIFHSTQPSD 1039
+ ++ K VK +G K R++N++ + SD
Sbjct: 456 IRRKTKDAFYKNIVK------KGYLLKKGKGKRWKNLYFILEGSD 494
Score = 49.3 bits (116), Expect = 4e-06
Identities = 24/80 (30%), Positives = 43/80 (53%)
Frame = +2
Query: 188 WFHRDLSGLDAETLLKGRGVHGSFLARPSRKNQGDFSLSVRVGDQVTHIRIQNSGDFYDL 367
WFH +S +A LL G SFL RPS GD+SL R + + +I + + +
Sbjct: 344 WFHGKISKQEAYNLLMTVGQVCSFLVRPSDNTPGDYSLYFRTNENIQRFKICPTPNNQFM 403
Query: 368 YGGEKFATLTELVEYYTQQQ 427
GG + ++ +++++Y ++Q
Sbjct: 404 MGGRYYNSIGDIIDHYRKEQ 423
>ref|XP_003356350.1| PREDICTED: tyrosine-protein kinase Lck-like [Sus scrofa].
Length = 444
Score = 57.0 bits (136), Expect = 2e-08
Identities = 45/115 (39%), Positives = 51/115 (44%), Gaps = 8/115 (6%)
Frame = +2
Query: 188 WFHRDLSGLDAETLLKGRG-VHGSFLARPSRKNQGDFSLSVRVGDQ-----VTHIRIQN- 346
WF ++LS DAE L G HGSFL R S G FSLSVR DQ V H +I+N
Sbjct: 127 WFFKNLSRKDAERQLLAPGNTHGSFLIRESESTAGSFSLSVRDFDQNQGEVVKHYKIRNL 186
Query: 347 -SGDFYDLYGGEKFATLTELVEYYTQQQGVLQDRDGTIIHLKYPLNCSDPTSERW 508
G FY + F L ELV +YT DG L P P W
Sbjct: 187 DKGGFY-ISPRITFPGLHELVHHYTNSS------DGLCTRLNRPCQTQKPQKPWW 234
Database: RefSeq49_SP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 11,343,932
Number of sequences in database: 24,897
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 24897
Number of Hits to DB: 28,865,632
Number of extensions: 839771
Number of successful extensions: 4998
Number of sequences better than 1.0e-05: 26
Number of HSP's gapped: 4915
Number of HSP's successfully gapped: 42
Length of query: 379
Length of database: 11,343,932
Length adjustment: 101
Effective length of query: 278
Effective length of database: 8,829,335
Effective search space: 2454555130
Effective search space used: 2454555130
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)
Search to RefSeqMP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-012859
(1139 letters)
Database: RefSeq49_MP.fasta
30,036 sequences; 15,617,559 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_038573.2| tyrosine-protein phosphatase non-receptor type ... 563 e-160
Alignment gi|NP_001071173.1| tyrosine-protein phosphatase non-receptor ty... 557 e-159
Alignment gi|NP_001103462.1| tyrosine-protein phosphatase non-receptor ty... 343 1e-94
Alignment gi|NP_035332.1| tyrosine-protein phosphatase non-receptor type ... 343 1e-94
Alignment gi|NP_067255.2| 1-phosphatidylinositol-4,5-bisphosphate phospho... 66 6e-11
Alignment gi|NP_034945.1| GRB2-related adaptor protein 2 [Mus musculus]. 61 2e-09
Alignment gi|NP_036062.1| dual adapter for phosphotyrosine and 3-phosphot... 60 3e-09
Alignment gi|NP_663427.2| RAS p21 protein activator 1 [Mus musculus]. 57 2e-08
Alignment gi|NP_758489.1| 1-phosphatidylinositol-4,5-bisphosphate phospho... 56 5e-08
Alignment gi|NP_001155905.1| proto-oncogene tyrosine-protein kinase LCK i... 55 8e-08
>ref|NP_038573.2| tyrosine-protein phosphatase non-receptor type 6 isoform a [Mus
musculus].
Length = 595
Score = 563 bits (1450), Expect = e-160
Identities = 279/316 (88%), Positives = 291/316 (92%), Gaps = 2/316 (0%)
Frame = +2
Query: 179 MVRWFHRDLSGLDAETLLKGRGVHGSFLARPSRKNQGDFSLSVRVGDQVTHIRIQNSGDF 358
MVRWFHRDLSG DAETLLKGRGV GSFLARPSRKNQGDFSLSVRV DQVTHIRIQNSGDF
Sbjct: 1 MVRWFHRDLSGPDAETLLKGRGVPGSFLARPSRKNQGDFSLSVRVDDQVTHIRIQNSGDF 60
Query: 359 YDLYGGEKFATLTELVEYYTQQQGVLQDRDGTIIHLKYPLNCSDPTSERWYHGHMSGGQA 538
YDLYGGEKFATLTELVEYYTQQQG+LQDRDGTIIHLKYPLNCSDPTSERWYHGH+SGGQA
Sbjct: 61 YDLYGGEKFATLTELVEYYTQQQGILQDRDGTIIHLKYPLNCSDPTSERWYHGHISGGQA 120
Query: 539 ETLLQAKGEPWTFLVRESLSQPGDFVLSVLSDQPKAGPGSPLKVTHIKVMCEGGRYTVGG 718
E+LLQAKGEPWTFLVRESLSQPGDFVLSVL+DQPKAGPGSPL+VTHIKVMCEGGRYTVGG
Sbjct: 121 ESLLQAKGEPWTFLVRESLSQPGDFVLSVLNDQPKAGPGSPLRVTHIKVMCEGGRYTVGG 180
Query: 719 PETFDSLTDLVEHFKKTGIEEASGAFVYLRQPYYATRVNAADIENRVLELNQKQESEETA 898
ETFDSLTDLVEHFKKTGIEEASGAFVYLRQPYYATRVNAADIENRVLELN+KQESE+TA
Sbjct: 181 SETFDSLTDLVEHFKKTGIEEASGAFVYLRQPYYATRVNAADIENRVLELNKKQESEDTA 240
Query: 899 KAGFWEEFESLQKQEVKNLHQRLEGQRPKNKSKNRYQNI--FHSTQPSDPARDGTVTSLG 1072
KAGFWEEFESLQKQEVKNLHQRLEGQRP+NKSKNRY+NI F ++ RD + G
Sbjct: 241 KAGFWEEFESLQKQEVKNLHQRLEGQRPENKSKNRYKNILPFDHSRVILQGRDSNIP--G 298
Query: 1073 PDYFNPTYVKNNC*GP 1120
DY N YVKN GP
Sbjct: 299 SDYINANYVKNQLLGP 314
Score = 67.8 bits (164), Expect = 2e-11
Identities = 40/111 (36%), Positives = 62/111 (55%), Gaps = 10/111 (9%)
Frame = +2
Query: 173 PRMVRWFHRDLSGLDAETLLKGRGVHGSFLARPSRKNQGDFSLSVRVGDQ---------- 322
P RW+H +SG AE+LL+ +G +FL R S GDF LSV + DQ
Sbjct: 105 PTSERWYHGHISGGQAESLLQAKGEPWTFLVRESLSQPGDFVLSV-LNDQPKAGPGSPLR 163
Query: 323 VTHIRIQNSGDFYDLYGGEKFATLTELVEYYTQQQGVLQDRDGTIIHLKYP 475
VTHI++ G Y + G E F +LT+LVE++ ++ +++ G ++L+ P
Sbjct: 164 VTHIKVMCEGGRYTVGGSETFDSLTDLVEHF--KKTGIEEASGAFVYLRQP 212
>ref|NP_001071173.1| tyrosine-protein phosphatase non-receptor type 6 isoform b [Mus
musculus].
Length = 597
Score = 557 bits (1436), Expect = e-159
Identities = 276/313 (88%), Positives = 288/313 (92%), Gaps = 2/313 (0%)
Frame = +2
Query: 188 WFHRDLSGLDAETLLKGRGVHGSFLARPSRKNQGDFSLSVRVGDQVTHIRIQNSGDFYDL 367
WFHRDLSG DAETLLKGRGV GSFLARPSRKNQGDFSLSVRV DQVTHIRIQNSGDFYDL
Sbjct: 6 WFHRDLSGPDAETLLKGRGVPGSFLARPSRKNQGDFSLSVRVDDQVTHIRIQNSGDFYDL 65
Query: 368 YGGEKFATLTELVEYYTQQQGVLQDRDGTIIHLKYPLNCSDPTSERWYHGHMSGGQAETL 547
YGGEKFATLTELVEYYTQQQG+LQDRDGTIIHLKYPLNCSDPTSERWYHGH+SGGQAE+L
Sbjct: 66 YGGEKFATLTELVEYYTQQQGILQDRDGTIIHLKYPLNCSDPTSERWYHGHISGGQAESL 125
Query: 548 LQAKGEPWTFLVRESLSQPGDFVLSVLSDQPKAGPGSPLKVTHIKVMCEGGRYTVGGPET 727
LQAKGEPWTFLVRESLSQPGDFVLSVL+DQPKAGPGSPL+VTHIKVMCEGGRYTVGG ET
Sbjct: 126 LQAKGEPWTFLVRESLSQPGDFVLSVLNDQPKAGPGSPLRVTHIKVMCEGGRYTVGGSET 185
Query: 728 FDSLTDLVEHFKKTGIEEASGAFVYLRQPYYATRVNAADIENRVLELNQKQESEETAKAG 907
FDSLTDLVEHFKKTGIEEASGAFVYLRQPYYATRVNAADIENRVLELN+KQESE+TAKAG
Sbjct: 186 FDSLTDLVEHFKKTGIEEASGAFVYLRQPYYATRVNAADIENRVLELNKKQESEDTAKAG 245
Query: 908 FWEEFESLQKQEVKNLHQRLEGQRPKNKSKNRYQNI--FHSTQPSDPARDGTVTSLGPDY 1081
FWEEFESLQKQEVKNLHQRLEGQRP+NKSKNRY+NI F ++ RD + G DY
Sbjct: 246 FWEEFESLQKQEVKNLHQRLEGQRPENKSKNRYKNILPFDHSRVILQGRDSNIP--GSDY 303
Query: 1082 FNPTYVKNNC*GP 1120
N YVKN GP
Sbjct: 304 INANYVKNQLLGP 316
Score = 72.4 bits (176), Expect = 6e-13
Identities = 42/108 (38%), Positives = 62/108 (57%), Gaps = 2/108 (1%)
Frame = +2
Query: 497 SERWYHGHMSGGQAETLLQAKGEPWTFLVRESLSQPGDFVLSVLSDQPKAGPGSPLKVTH 676
S W+H +SG AETLL+ +G P +FL R S GDF LSV D +VTH
Sbjct: 3 SRGWFHRDLSGPDAETLLKGRGVPGSFLARPSRKNQGDFSLSVRVDD---------QVTH 53
Query: 677 IKVMCEGGRYTVGGPETFDSLTDLVEHF-KKTGI-EEASGAFVYLRQP 814
I++ G Y + G E F +LT+LVE++ ++ GI ++ G ++L+ P
Sbjct: 54 IRIQNSGDFYDLYGGEKFATLTELVEYYTQQQGILQDRDGTIIHLKYP 101
Score = 67.8 bits (164), Expect = 2e-11
Identities = 40/111 (36%), Positives = 62/111 (55%), Gaps = 10/111 (9%)
Frame = +2
Query: 173 PRMVRWFHRDLSGLDAETLLKGRGVHGSFLARPSRKNQGDFSLSVRVGDQ---------- 322
P RW+H +SG AE+LL+ +G +FL R S GDF LSV + DQ
Sbjct: 107 PTSERWYHGHISGGQAESLLQAKGEPWTFLVRESLSQPGDFVLSV-LNDQPKAGPGSPLR 165
Query: 323 VTHIRIQNSGDFYDLYGGEKFATLTELVEYYTQQQGVLQDRDGTIIHLKYP 475
VTHI++ G Y + G E F +LT+LVE++ ++ +++ G ++L+ P
Sbjct: 166 VTHIKVMCEGGRYTVGGSETFDSLTDLVEHF--KKTGIEEASGAFVYLRQP 214
>ref|NP_001103462.1| tyrosine-protein phosphatase non-receptor type 11 isoform b [Mus
musculus].
Length = 593
Score = 343 bits (880), Expect = 1e-94
Identities = 171/307 (55%), Positives = 220/307 (71%), Gaps = 2/307 (0%)
Frame = +2
Query: 185 RWFHRDLSGLDAETLLKGRGVHGSFLARPSRKNQGDFSLSVRVGDQVTHIRIQNSGDFYD 364
RWFH +++G++AE LL RGV GSFLARPS+ N GDF+LSVR VTHI+IQN+GD+YD
Sbjct: 5 RWFHPNITGVEAENLLLTRGVDGSFLARPSKSNPGDFTLSVRRNGAVTHIKIQNTGDYYD 64
Query: 365 LYGGEKFATLTELVEYYTQQQGVLQDRDGTIIHLKYPLNCSDPTSERWYHGHMSGGQAET 544
LYGGEKFATL ELV+YY + G L++++G +I LKYPLNC+DPTSERW+HGH+SG +AE
Sbjct: 65 LYGGEKFATLAELVQYYMEHHGQLKEKNGDVIELKYPLNCADPTSERWFHGHLSGKEAEK 124
Query: 545 LLQAKGEPWTFLVRESLSQPGDFVLSVLS--DQPKAGPGSPLKVTHIKVMCEGGRYTVGG 718
LL KG+ +FLVRES S PGDFVLSV + D+ ++ G KVTH+ + C+ +Y VGG
Sbjct: 125 LLTEKGKHGSFLVRESQSHPGDFVLSVRTGDDKGESNDGKS-KVTHVMIRCQELKYDVGG 183
Query: 719 PETFDSLTDLVEHFKKTGIEEASGAFVYLRQPYYATRVNAADIENRVLELNQKQESEETA 898
E FDSLTDLVEH+KK + E G + L+QP TR+NAA+IE+RV EL++ E+ +
Sbjct: 184 GERFDSLTDLVEHYKKNPMVETLGTVLQLKQPLNTTRINAAEIESRVRELSKLAETTDKV 243
Query: 899 KAGFWEEFESLQKQEVKNLHQRLEGQRPKNKSKNRYQNIFHSTQPSDPARDGTVTSLGPD 1078
K GFWEEFE+LQ+QE K L+ R EGQR +NK+KNRY+NI DG D
Sbjct: 244 KQGFWEEFETLQQQECKLLYSRKEGQRQENKNKNRYKNILPFDHTRVVLHDGDPNEPVSD 303
Query: 1079 YFNPTYV 1099
Y N +
Sbjct: 304 YINANII 310
Score = 93.2 bits (230), Expect = 3e-19
Identities = 52/113 (46%), Positives = 70/113 (61%), Gaps = 10/113 (8%)
Frame = +2
Query: 173 PRMVRWFHRDLSGLDAETLLKGRGVHGSFLARPSRKNQGDFSLSVRVGD----------Q 322
P RWFH LSG +AE LL +G HGSFL R S+ + GDF LSVR GD +
Sbjct: 107 PTSERWFHGHLSGKEAEKLLTEKGKHGSFLVRESQSHPGDFVLSVRTGDDKGESNDGKSK 166
Query: 323 VTHIRIQNSGDFYDLYGGEKFATLTELVEYYTQQQGVLQDRDGTIIHLKYPLN 481
VTH+ I+ YD+ GGE+F +LT+LVE+Y ++ + + GT++ LK PLN
Sbjct: 167 VTHVMIRCQELKYDVGGGERFDSLTDLVEHY--KKNPMVETLGTVLQLKQPLN 217
Score = 68.9 bits (167), Expect = 7e-12
Identities = 43/119 (36%), Positives = 65/119 (54%), Gaps = 2/119 (1%)
Frame = +2
Query: 494 TSERWYHGHMSGGQAETLLQAKGEPWTFLVRESLSQPGDFVLSVLSDQPKAGPGSPLKVT 673
TS RW+H +++G +AE LL +G +FL R S S PGDF LSV + VT
Sbjct: 2 TSRRWFHPNITGVEAENLLLTRGVDGSFLARPSKSNPGDFTLSVRRNG---------AVT 52
Query: 674 HIKVMCEGGRYTVGGPETFDSLTDLVEHFKK--TGIEEASGAFVYLRQPYYATRVNAAD 844
HIK+ G Y + G E F +L +LV+++ + ++E +G + L+ P +N AD
Sbjct: 53 HIKIQNTGDYYDLYGGEKFATLAELVQYYMEHHGQLKEKNGDVIELKYP-----LNCAD 106
>ref|NP_035332.1| tyrosine-protein phosphatase non-receptor type 11 isoform a [Mus
musculus].
Length = 597
Score = 343 bits (880), Expect = 1e-94
Identities = 171/307 (55%), Positives = 220/307 (71%), Gaps = 2/307 (0%)
Frame = +2
Query: 185 RWFHRDLSGLDAETLLKGRGVHGSFLARPSRKNQGDFSLSVRVGDQVTHIRIQNSGDFYD 364
RWFH +++G++AE LL RGV GSFLARPS+ N GDF+LSVR VTHI+IQN+GD+YD
Sbjct: 5 RWFHPNITGVEAENLLLTRGVDGSFLARPSKSNPGDFTLSVRRNGAVTHIKIQNTGDYYD 64
Query: 365 LYGGEKFATLTELVEYYTQQQGVLQDRDGTIIHLKYPLNCSDPTSERWYHGHMSGGQAET 544
LYGGEKFATL ELV+YY + G L++++G +I LKYPLNC+DPTSERW+HGH+SG +AE
Sbjct: 65 LYGGEKFATLAELVQYYMEHHGQLKEKNGDVIELKYPLNCADPTSERWFHGHLSGKEAEK 124
Query: 545 LLQAKGEPWTFLVRESLSQPGDFVLSVLS--DQPKAGPGSPLKVTHIKVMCEGGRYTVGG 718
LL KG+ +FLVRES S PGDFVLSV + D+ ++ G KVTH+ + C+ +Y VGG
Sbjct: 125 LLTEKGKHGSFLVRESQSHPGDFVLSVRTGDDKGESNDGKS-KVTHVMIRCQELKYDVGG 183
Query: 719 PETFDSLTDLVEHFKKTGIEEASGAFVYLRQPYYATRVNAADIENRVLELNQKQESEETA 898
E FDSLTDLVEH+KK + E G + L+QP TR+NAA+IE+RV EL++ E+ +
Sbjct: 184 GERFDSLTDLVEHYKKNPMVETLGTVLQLKQPLNTTRINAAEIESRVRELSKLAETTDKV 243
Query: 899 KAGFWEEFESLQKQEVKNLHQRLEGQRPKNKSKNRYQNIFHSTQPSDPARDGTVTSLGPD 1078
K GFWEEFE+LQ+QE K L+ R EGQR +NK+KNRY+NI DG D
Sbjct: 244 KQGFWEEFETLQQQECKLLYSRKEGQRQENKNKNRYKNILPFDHTRVVLHDGDPNEPVSD 303
Query: 1079 YFNPTYV 1099
Y N +
Sbjct: 304 YINANII 310
Score = 93.2 bits (230), Expect = 3e-19
Identities = 52/113 (46%), Positives = 70/113 (61%), Gaps = 10/113 (8%)
Frame = +2
Query: 173 PRMVRWFHRDLSGLDAETLLKGRGVHGSFLARPSRKNQGDFSLSVRVGD----------Q 322
P RWFH LSG +AE LL +G HGSFL R S+ + GDF LSVR GD +
Sbjct: 107 PTSERWFHGHLSGKEAEKLLTEKGKHGSFLVRESQSHPGDFVLSVRTGDDKGESNDGKSK 166
Query: 323 VTHIRIQNSGDFYDLYGGEKFATLTELVEYYTQQQGVLQDRDGTIIHLKYPLN 481
VTH+ I+ YD+ GGE+F +LT+LVE+Y ++ + + GT++ LK PLN
Sbjct: 167 VTHVMIRCQELKYDVGGGERFDSLTDLVEHY--KKNPMVETLGTVLQLKQPLN 217
Score = 68.9 bits (167), Expect = 7e-12
Identities = 43/119 (36%), Positives = 65/119 (54%), Gaps = 2/119 (1%)
Frame = +2
Query: 494 TSERWYHGHMSGGQAETLLQAKGEPWTFLVRESLSQPGDFVLSVLSDQPKAGPGSPLKVT 673
TS RW+H +++G +AE LL +G +FL R S S PGDF LSV + VT
Sbjct: 2 TSRRWFHPNITGVEAENLLLTRGVDGSFLARPSKSNPGDFTLSVRRNG---------AVT 52
Query: 674 HIKVMCEGGRYTVGGPETFDSLTDLVEHFKK--TGIEEASGAFVYLRQPYYATRVNAAD 844
HIK+ G Y + G E F +L +LV+++ + ++E +G + L+ P +N AD
Sbjct: 53 HIKIQNTGDYYDLYGGEKFATLAELVQYYMEHHGQLKEKNGDVIELKYP-----LNCAD 106
>ref|NP_067255.2| 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma-1
[Mus musculus].
Length = 1302
Score = 65.9 bits (159), Expect = 6e-11
Identities = 63/215 (29%), Positives = 98/215 (45%), Gaps = 21/215 (9%)
Frame = +2
Query: 185 RWFHRDL-SGLD----AETLLKGRGVH-----GSFLARPSRKNQGDFSLSVRVGDQVTHI 334
+WFH L +G D AE LL + GSFL R S GD++LS +V H
Sbjct: 549 KWFHGKLGAGRDGRHIAERLLTEYCIETGAPDGSFLVRESETFVGDYTLSFWRNGKVQHC 608
Query: 335 RIQNSGDF----YDLYGGEKFATLTELVEYYTQQQGVLQDRDGTIIHLKYPLNCSDPT-- 496
RI + D + L F +L +L+ +Y QQ L+ + + + S+P
Sbjct: 609 RIHSRQDAGTPKFFLTDNLVFDSLYDLITHY--QQVPLRCNE-------FEMRLSEPVPQ 659
Query: 497 -----SERWYHGHMSGGQAETLLQAKGEPWTFLVRESLSQPGDFVLSVLSDQPKAGPGSP 661
S+ WYH ++ QAE +L FLVR+ ++P + +S ++
Sbjct: 660 TNAHESKEWYHASLTRAQAEHMLMRVPRDGAFLVRKR-NEPNSYAISFRAEG-------- 710
Query: 662 LKVTHIKVMCEGGRYTVGGPETFDSLTDLVEHFKK 766
K+ H +V EG +G E FDSL DL+ +++K
Sbjct: 711 -KIKHCRVQQEGQTVMLGNSE-FDSLVDLISYYEK 743
>ref|NP_034945.1| GRB2-related adaptor protein 2 [Mus musculus].
Length = 322
Score = 60.8 bits (146), Expect = 2e-09
Identities = 37/93 (39%), Positives = 50/93 (53%), Gaps = 4/93 (4%)
Frame = +2
Query: 188 WFHRDLSGLDAETLLKGRGVHGSFLARPSRKNQGDFSLSVRVGDQVTHIRIQNSGDFYDL 367
WFH LS AE LL G+ + G F+ R S+ + GDFS+SVR D V H ++
Sbjct: 58 WFHEGLSRHQAENLLMGKDI-GFFIIRASQSSPGDFSISVRHEDDVQHFKVMRDTKGNYF 116
Query: 368 YGGEKFATLTELVEYY----TQQQGVLQDRDGT 454
EKF +L +LV+YY +Q + RDGT
Sbjct: 117 LWTEKFPSLNKLVDYYRTTSISKQKQVFLRDGT 149
Score = 51.2 bits (121), Expect = 1e-06
Identities = 38/110 (34%), Positives = 53/110 (48%), Gaps = 1/110 (0%)
Frame = +2
Query: 473 PLNCSDPTSERWYHGHMSGGQAETLLQAKGEPWTFLVRESLSQPGDFVLSVLSDQPKAGP 652
P N D W+H +S QAE LL K + F++R S S PGDF +SV +
Sbjct: 47 PKNFIDIEFPEWFHEGLSRHQAENLLMGK-DIGFFIIRASQSSPGDFSISVRHED----- 100
Query: 653 GSPLKVTHIKVMCE-GGRYTVGGPETFDSLTDLVEHFKKTGIEEASGAFV 799
V H KVM + G Y + E F SL LV++++ T I + F+
Sbjct: 101 ----DVQHFKVMRDTKGNYFL-WTEKFPSLNKLVDYYRTTSISKQKQVFL 145
>ref|NP_036062.1| dual adapter for phosphotyrosine and 3-phosphotyrosine and
3-phosphoinositide [Mus musculus].
Length = 280
Score = 60.1 bits (144), Expect = 3e-09
Identities = 32/96 (33%), Positives = 56/96 (58%)
Frame = +2
Query: 188 WFHRDLSGLDAETLLKGRGVHGSFLARPSRKNQGDFSLSVRVGDQVTHIRIQNSGDFYDL 367
W+H +L+ AE LL G GS+L R S + G +SLSVR D V H ++ +G +
Sbjct: 35 WYHGNLTRHAAEALLLSNGRDGSYLLRDSNEQTGLYSLSVRAKDSVKHFHVEYTGYSFK- 93
Query: 368 YGGEKFATLTELVEYYTQQQGVLQDRDGTIIHLKYP 475
+G ++++L + V+++ Q ++ GT++ LK+P
Sbjct: 94 FGFNEYSSLKDFVKHFANQP-LIGSETGTLMVLKHP 128
Score = 49.7 bits (117), Expect = 4e-06
Identities = 34/105 (32%), Positives = 51/105 (48%), Gaps = 1/105 (0%)
Frame = +2
Query: 506 WYHGHMSGGQAETLLQAKGEPWTFLVRESLSQPGDFVLSVLSDQPKAGPGSPLKVTHIKV 685
WYHG+++ AE LL + G ++L+R+S Q G + LSV + V H V
Sbjct: 35 WYHGNLTRHAAEALLLSNGRDGSYLLRDSNEQTGLYSLSVRAKD---------SVKHFHV 85
Query: 686 MCEGGRYTVGGPETFDSLTDLVEHF-KKTGIEEASGAFVYLRQPY 817
G + G E + SL D V+HF + I +G + L+ PY
Sbjct: 86 EYTGYSFKFGFNE-YSSLKDFVKHFANQPLIGSETGTLMVLKHPY 129
>ref|NP_663427.2| RAS p21 protein activator 1 [Mus musculus].
Length = 1038
Score = 57.4 bits (137), Expect = 2e-08
Identities = 32/90 (35%), Positives = 49/90 (54%)
Frame = +2
Query: 491 PTSERWYHGHMSGGQAETLLQAKGEPWTFLVRESLSQPGDFVLSVLSDQPKAGPGSPLKV 670
P + +WYHG + AE L+ G+ ++L+RES +PG FVLS LS V
Sbjct: 167 PPTNQWYHGKLDRTIAEERLRQAGKSGSYLIRESDRRPGSFVLSFLSQTN--------VV 218
Query: 671 THIKVMCEGGRYTVGGPETFDSLTDLVEHF 760
H +++ G Y +GG F SL+DL+ ++
Sbjct: 219 NHFRIIAMCGDYYIGG-RRFSSLSDLIGYY 247
Score = 53.5 bits (127), Expect = 3e-07
Identities = 37/113 (32%), Positives = 57/113 (50%), Gaps = 2/113 (1%)
Frame = +2
Query: 173 PRMVRWFHRDLSGLDAETLLKGRGVHGSFLARPSRKNQGDFSLS-VRVGDQVTHIR-IQN 346
P +W+H L AE L+ G GS+L R S + G F LS + + V H R I
Sbjct: 167 PPTNQWYHGKLDRTIAEERLRQAGKSGSYLIRESDRRPGSFVLSFLSQTNVVNHFRIIAM 226
Query: 347 SGDFYDLYGGEKFATLTELVEYYTQQQGVLQDRDGTIIHLKYPLNCSDPTSER 505
GD+Y GG +F++L++L+ YY+ +L+ L YP+ +P +R
Sbjct: 227 CGDYY--IGGRRFSSLSDLIGYYSHVSCLLKGE-----KLLYPVAPPEPVEDR 272
Score = 49.3 bits (116), Expect = 6e-06
Identities = 37/150 (24%), Positives = 68/150 (45%), Gaps = 3/150 (2%)
Frame = +2
Query: 374 GEKFATLTELVEYYTQQQGVLQDRDGTIIH--LKYPLNCSDPTSER-WYHGHMSGGQAET 544
G+ F EL + + + D G I+ ++ DP + W+HG +S +A
Sbjct: 295 GDMFIVHNELEDGWMWVTNLRTDEQGLIVEDLVEEVGREEDPHEGKIWFHGKISKQEAYN 354
Query: 545 LLQAKGEPWTFLVRESLSQPGDFVLSVLSDQPKAGPGSPLKVTHIKVMCEGGRYTVGGPE 724
LL G+ +FLVR S + PGD+ L +++ + K+ + G
Sbjct: 355 LLMTVGQVCSFLVRPSDNTPGDYSLYFRTNE---------NIQRFKICPTPNNQFMMGGR 405
Query: 725 TFDSLTDLVEHFKKTGIEEASGAFVYLRQP 814
++S+ D+++H++K I E YL++P
Sbjct: 406 YYNSIGDIIDHYRKEQIVEG----YYLKEP 431
Score = 49.3 bits (116), Expect = 6e-06
Identities = 24/80 (30%), Positives = 43/80 (53%)
Frame = +2
Query: 188 WFHRDLSGLDAETLLKGRGVHGSFLARPSRKNQGDFSLSVRVGDQVTHIRIQNSGDFYDL 367
WFH +S +A LL G SFL RPS GD+SL R + + +I + + +
Sbjct: 342 WFHGKISKQEAYNLLMTVGQVCSFLVRPSDNTPGDYSLYFRTNENIQRFKICPTPNNQFM 401
Query: 368 YGGEKFATLTELVEYYTQQQ 427
GG + ++ +++++Y ++Q
Sbjct: 402 MGGRYYNSIGDIIDHYRKEQ 421
>ref|NP_758489.1| 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma-2
[Mus musculus].
Length = 1265
Score = 56.2 bits (134), Expect = 5e-08
Identities = 51/211 (24%), Positives = 94/211 (44%), Gaps = 17/211 (8%)
Frame = +2
Query: 185 RWFHRDL-SGLDAETLLKGRGVH-----GSFLARPSRKNQGDFSLSVRVGDQVTHIRIQN 346
+WFH+ + S AE LL+ G+FL R S D++LS +V H RI++
Sbjct: 531 KWFHKKVESRTSAEKLLQEYCAETGAKDGTFLVRESETFPNDYTLSFWRSGRVQHCRIRS 590
Query: 347 SGDF----YDLYGGEKFATLTELVEYYTQQQGVLQDRDGTIIHLKYPLNCSDPT------ 496
+ + Y L F ++ L+++Y R+ + ++ L +DP
Sbjct: 591 TMENGVMKYYLTDNLTFNSIYALIQHY---------REAHLRCAEFELRLTDPVPNPNPH 641
Query: 497 -SERWYHGHMSGGQAETLLQAKGEPWTFLVRESLSQPGDFVLSVLSDQPKAGPGSPLKVT 673
S+ WY+ +S G+AE +L FL+R+ + ++ + KV
Sbjct: 642 ESKPWYYDSLSRGEAEDMLMRIPRDGAFLIRKR-EGTNSYAITFRARG---------KVK 691
Query: 674 HIKVMCEGGRYTVGGPETFDSLTDLVEHFKK 766
H ++ +G + +G F+SL +LV +++K
Sbjct: 692 HCRINRDGRHFVLGTSAYFESLVELVSYYEK 722
>ref|NP_001155905.1| proto-oncogene tyrosine-protein kinase LCK isoform b [Mus
musculus].
Length = 509
Score = 55.5 bits (132), Expect = 8e-08
Identities = 44/115 (38%), Positives = 52/115 (45%), Gaps = 8/115 (6%)
Frame = +2
Query: 188 WFHRDLSGLDAETLLKGRG-VHGSFLARPSRKNQGDFSLSVRVGDQ-----VTHIRIQN- 346
WF ++LS DAE L G HGSFL R S G FSLSVR DQ V H +I+N
Sbjct: 127 WFFKNLSRKDAERQLLAPGNTHGSFLIRESESTAGSFSLSVRDFDQNQGEVVKHYKIRNL 186
Query: 347 -SGDFYDLYGGEKFATLTELVEYYTQQQGVLQDRDGTIIHLKYPLNCSDPTSERW 508
+G FY + F L +LV +YT DG L P P W
Sbjct: 187 DNGGFY-ISPRITFPGLHDLVRHYTNAS------DGLCTKLSRPCQTQKPQKPWW 234
Database: RefSeq49_MP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 15,617,559
Number of sequences in database: 30,036
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 30036
Number of Hits to DB: 38,383,720
Number of extensions: 1071416
Number of successful extensions: 5916
Number of sequences better than 1.0e-05: 35
Number of HSP's gapped: 5786
Number of HSP's successfully gapped: 51
Length of query: 379
Length of database: 15,617,559
Length adjustment: 103
Effective length of query: 276
Effective length of database: 12,523,851
Effective search space: 3456582876
Effective search space used: 3456582876
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to RefSeqHP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-012859
(1139 letters)
Database: RefSeq49_HP.fasta
32,964 sequences; 18,297,164 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_536859.1| tyrosine-protein phosphatase non-receptor type ... 574 e-164
Alignment gi|NP_002822.2| tyrosine-protein phosphatase non-receptor type ... 574 e-164
Alignment gi|NP_536858.1| tyrosine-protein phosphatase non-receptor type ... 568 e-162
Alignment gi|NP_002825.3| tyrosine-protein phosphatase non-receptor type ... 343 2e-94
Alignment gi|NP_002651.2| 1-phosphatidylinositol-4,5-bisphosphate phospho... 66 7e-11
Alignment gi|NP_877963.1| 1-phosphatidylinositol-4,5-bisphosphate phospho... 66 7e-11
Alignment gi|NP_004801.1| GRB2-related adapter protein 2 [Homo sapiens]. 64 3e-10
Alignment gi|NP_055210.2| dual adapter for phosphotyrosine and 3-phosphot... 62 1e-09
Alignment gi|NP_002652.2| 1-phosphatidylinositol-4,5-bisphosphate phospho... 59 1e-08
Alignment gi|NP_002881.1| ras GTPase-activating protein 1 isoform 1 [Homo... 58 2e-08
>ref|NP_536859.1| tyrosine-protein phosphatase non-receptor type 6 isoform 3 [Homo
sapiens].
Length = 624
Score = 574 bits (1479), Expect = e-164
Identities = 284/316 (89%), Positives = 293/316 (92%), Gaps = 2/316 (0%)
Frame = +2
Query: 179 MVRWFHRDLSGLDAETLLKGRGVHGSFLARPSRKNQGDFSLSVRVGDQVTHIRIQNSGDF 358
MVRWFHRDLSGLDAETLLKGRGVHGSFLARPSRKNQGDFSLSVRVGDQVTHIRIQNSGDF
Sbjct: 1 MVRWFHRDLSGLDAETLLKGRGVHGSFLARPSRKNQGDFSLSVRVGDQVTHIRIQNSGDF 60
Query: 359 YDLYGGEKFATLTELVEYYTQQQGVLQDRDGTIIHLKYPLNCSDPTSERWYHGHMSGGQA 538
YDLYGGEKFATLTELVEYYTQQQGVLQDRDGTIIHLKYPLNCSDPTSERWYHGHMSGGQA
Sbjct: 61 YDLYGGEKFATLTELVEYYTQQQGVLQDRDGTIIHLKYPLNCSDPTSERWYHGHMSGGQA 120
Query: 539 ETLLQAKGEPWTFLVRESLSQPGDFVLSVLSDQPKAGPGSPLKVTHIKVMCEGGRYTVGG 718
ETLLQAKGEPWTFLVRESLSQPGDFVLSVLSDQPKAGPGSPL+VTHIKVMCEGGRYTVGG
Sbjct: 121 ETLLQAKGEPWTFLVRESLSQPGDFVLSVLSDQPKAGPGSPLRVTHIKVMCEGGRYTVGG 180
Query: 719 PETFDSLTDLVEHFKKTGIEEASGAFVYLRQPYYATRVNAADIENRVLELNQKQESEETA 898
ETFDSLTDLVEHFKKTGIEEASGAFVYLRQPYYATRVNAADIENRVLELN+KQESE+TA
Sbjct: 181 LETFDSLTDLVEHFKKTGIEEASGAFVYLRQPYYATRVNAADIENRVLELNKKQESEDTA 240
Query: 899 KAGFWEEFESLQKQEVKNLHQRLEGQRPKNKSKNRYQNI--FHSTQPSDPARDGTVTSLG 1072
KAGFWEEFESLQKQEVKNLHQRLEGQRP+NK KNRY+NI F ++ RD + G
Sbjct: 241 KAGFWEEFESLQKQEVKNLHQRLEGQRPENKGKNRYKNILPFDHSRVILQGRDSNIP--G 298
Query: 1073 PDYFNPTYVKNNC*GP 1120
DY N Y+KN GP
Sbjct: 299 SDYINANYIKNQLLGP 314
Score = 67.8 bits (164), Expect = 2e-11
Identities = 41/111 (36%), Positives = 62/111 (55%), Gaps = 10/111 (9%)
Frame = +2
Query: 173 PRMVRWFHRDLSGLDAETLLKGRGVHGSFLARPSRKNQGDFSLSVRVGDQ---------- 322
P RW+H +SG AETLL+ +G +FL R S GDF LSV + DQ
Sbjct: 105 PTSERWYHGHMSGGQAETLLQAKGEPWTFLVRESLSQPGDFVLSV-LSDQPKAGPGSPLR 163
Query: 323 VTHIRIQNSGDFYDLYGGEKFATLTELVEYYTQQQGVLQDRDGTIIHLKYP 475
VTHI++ G Y + G E F +LT+LVE++ ++ +++ G ++L+ P
Sbjct: 164 VTHIKVMCEGGRYTVGGLETFDSLTDLVEHF--KKTGIEEASGAFVYLRQP 212
>ref|NP_002822.2| tyrosine-protein phosphatase non-receptor type 6 isoform 1 [Homo
sapiens].
Length = 595
Score = 574 bits (1479), Expect = e-164
Identities = 284/316 (89%), Positives = 293/316 (92%), Gaps = 2/316 (0%)
Frame = +2
Query: 179 MVRWFHRDLSGLDAETLLKGRGVHGSFLARPSRKNQGDFSLSVRVGDQVTHIRIQNSGDF 358
MVRWFHRDLSGLDAETLLKGRGVHGSFLARPSRKNQGDFSLSVRVGDQVTHIRIQNSGDF
Sbjct: 1 MVRWFHRDLSGLDAETLLKGRGVHGSFLARPSRKNQGDFSLSVRVGDQVTHIRIQNSGDF 60
Query: 359 YDLYGGEKFATLTELVEYYTQQQGVLQDRDGTIIHLKYPLNCSDPTSERWYHGHMSGGQA 538
YDLYGGEKFATLTELVEYYTQQQGVLQDRDGTIIHLKYPLNCSDPTSERWYHGHMSGGQA
Sbjct: 61 YDLYGGEKFATLTELVEYYTQQQGVLQDRDGTIIHLKYPLNCSDPTSERWYHGHMSGGQA 120
Query: 539 ETLLQAKGEPWTFLVRESLSQPGDFVLSVLSDQPKAGPGSPLKVTHIKVMCEGGRYTVGG 718
ETLLQAKGEPWTFLVRESLSQPGDFVLSVLSDQPKAGPGSPL+VTHIKVMCEGGRYTVGG
Sbjct: 121 ETLLQAKGEPWTFLVRESLSQPGDFVLSVLSDQPKAGPGSPLRVTHIKVMCEGGRYTVGG 180
Query: 719 PETFDSLTDLVEHFKKTGIEEASGAFVYLRQPYYATRVNAADIENRVLELNQKQESEETA 898
ETFDSLTDLVEHFKKTGIEEASGAFVYLRQPYYATRVNAADIENRVLELN+KQESE+TA
Sbjct: 181 LETFDSLTDLVEHFKKTGIEEASGAFVYLRQPYYATRVNAADIENRVLELNKKQESEDTA 240
Query: 899 KAGFWEEFESLQKQEVKNLHQRLEGQRPKNKSKNRYQNI--FHSTQPSDPARDGTVTSLG 1072
KAGFWEEFESLQKQEVKNLHQRLEGQRP+NK KNRY+NI F ++ RD + G
Sbjct: 241 KAGFWEEFESLQKQEVKNLHQRLEGQRPENKGKNRYKNILPFDHSRVILQGRDSNIP--G 298
Query: 1073 PDYFNPTYVKNNC*GP 1120
DY N Y+KN GP
Sbjct: 299 SDYINANYIKNQLLGP 314
Score = 67.8 bits (164), Expect = 2e-11
Identities = 41/111 (36%), Positives = 62/111 (55%), Gaps = 10/111 (9%)
Frame = +2
Query: 173 PRMVRWFHRDLSGLDAETLLKGRGVHGSFLARPSRKNQGDFSLSVRVGDQ---------- 322
P RW+H +SG AETLL+ +G +FL R S GDF LSV + DQ
Sbjct: 105 PTSERWYHGHMSGGQAETLLQAKGEPWTFLVRESLSQPGDFVLSV-LSDQPKAGPGSPLR 163
Query: 323 VTHIRIQNSGDFYDLYGGEKFATLTELVEYYTQQQGVLQDRDGTIIHLKYP 475
VTHI++ G Y + G E F +LT+LVE++ ++ +++ G ++L+ P
Sbjct: 164 VTHIKVMCEGGRYTVGGLETFDSLTDLVEHF--KKTGIEEASGAFVYLRQP 212
>ref|NP_536858.1| tyrosine-protein phosphatase non-receptor type 6 isoform 2 [Homo
sapiens].
Length = 597
Score = 568 bits (1465), Expect = e-162
Identities = 281/313 (89%), Positives = 290/313 (92%), Gaps = 2/313 (0%)
Frame = +2
Query: 188 WFHRDLSGLDAETLLKGRGVHGSFLARPSRKNQGDFSLSVRVGDQVTHIRIQNSGDFYDL 367
WFHRDLSGLDAETLLKGRGVHGSFLARPSRKNQGDFSLSVRVGDQVTHIRIQNSGDFYDL
Sbjct: 6 WFHRDLSGLDAETLLKGRGVHGSFLARPSRKNQGDFSLSVRVGDQVTHIRIQNSGDFYDL 65
Query: 368 YGGEKFATLTELVEYYTQQQGVLQDRDGTIIHLKYPLNCSDPTSERWYHGHMSGGQAETL 547
YGGEKFATLTELVEYYTQQQGVLQDRDGTIIHLKYPLNCSDPTSERWYHGHMSGGQAETL
Sbjct: 66 YGGEKFATLTELVEYYTQQQGVLQDRDGTIIHLKYPLNCSDPTSERWYHGHMSGGQAETL 125
Query: 548 LQAKGEPWTFLVRESLSQPGDFVLSVLSDQPKAGPGSPLKVTHIKVMCEGGRYTVGGPET 727
LQAKGEPWTFLVRESLSQPGDFVLSVLSDQPKAGPGSPL+VTHIKVMCEGGRYTVGG ET
Sbjct: 126 LQAKGEPWTFLVRESLSQPGDFVLSVLSDQPKAGPGSPLRVTHIKVMCEGGRYTVGGLET 185
Query: 728 FDSLTDLVEHFKKTGIEEASGAFVYLRQPYYATRVNAADIENRVLELNQKQESEETAKAG 907
FDSLTDLVEHFKKTGIEEASGAFVYLRQPYYATRVNAADIENRVLELN+KQESE+TAKAG
Sbjct: 186 FDSLTDLVEHFKKTGIEEASGAFVYLRQPYYATRVNAADIENRVLELNKKQESEDTAKAG 245
Query: 908 FWEEFESLQKQEVKNLHQRLEGQRPKNKSKNRYQNI--FHSTQPSDPARDGTVTSLGPDY 1081
FWEEFESLQKQEVKNLHQRLEGQRP+NK KNRY+NI F ++ RD + G DY
Sbjct: 246 FWEEFESLQKQEVKNLHQRLEGQRPENKGKNRYKNILPFDHSRVILQGRDSNIP--GSDY 303
Query: 1082 FNPTYVKNNC*GP 1120
N Y+KN GP
Sbjct: 304 INANYIKNQLLGP 316
Score = 67.8 bits (164), Expect = 2e-11
Identities = 41/111 (36%), Positives = 62/111 (55%), Gaps = 10/111 (9%)
Frame = +2
Query: 173 PRMVRWFHRDLSGLDAETLLKGRGVHGSFLARPSRKNQGDFSLSVRVGDQ---------- 322
P RW+H +SG AETLL+ +G +FL R S GDF LSV + DQ
Sbjct: 107 PTSERWYHGHMSGGQAETLLQAKGEPWTFLVRESLSQPGDFVLSV-LSDQPKAGPGSPLR 165
Query: 323 VTHIRIQNSGDFYDLYGGEKFATLTELVEYYTQQQGVLQDRDGTIIHLKYP 475
VTHI++ G Y + G E F +LT+LVE++ ++ +++ G ++L+ P
Sbjct: 166 VTHIKVMCEGGRYTVGGLETFDSLTDLVEHF--KKTGIEEASGAFVYLRQP 214
Score = 66.2 bits (160), Expect = 5e-11
Identities = 40/109 (36%), Positives = 61/109 (55%), Gaps = 3/109 (2%)
Frame = +2
Query: 497 SERWYHGHMSGGQAETLLQAKGEPWTFLVRESLSQPGDFVLSV-LSDQPKAGPGSPLKVT 673
S W+H +SG AETLL+ +G +FL R S GDF LSV + DQ VT
Sbjct: 3 SRGWFHRDLSGLDAETLLKGRGVHGSFLARPSRKNQGDFSLSVRVGDQ----------VT 52
Query: 674 HIKVMCEGGRYTVGGPETFDSLTDLVEHF--KKTGIEEASGAFVYLRQP 814
HI++ G Y + G E F +LT+LVE++ ++ +++ G ++L+ P
Sbjct: 53 HIRIQNSGDFYDLYGGEKFATLTELVEYYTQQQGVLQDRDGTIIHLKYP 101
>ref|NP_002825.3| tyrosine-protein phosphatase non-receptor type 11 [Homo sapiens].
Length = 593
Score = 343 bits (880), Expect = 2e-94
Identities = 171/307 (55%), Positives = 220/307 (71%), Gaps = 2/307 (0%)
Frame = +2
Query: 185 RWFHRDLSGLDAETLLKGRGVHGSFLARPSRKNQGDFSLSVRVGDQVTHIRIQNSGDFYD 364
RWFH +++G++AE LL RGV GSFLARPS+ N GDF+LSVR VTHI+IQN+GD+YD
Sbjct: 5 RWFHPNITGVEAENLLLTRGVDGSFLARPSKSNPGDFTLSVRRNGAVTHIKIQNTGDYYD 64
Query: 365 LYGGEKFATLTELVEYYTQQQGVLQDRDGTIIHLKYPLNCSDPTSERWYHGHMSGGQAET 544
LYGGEKFATL ELV+YY + G L++++G +I LKYPLNC+DPTSERW+HGH+SG +AE
Sbjct: 65 LYGGEKFATLAELVQYYMEHHGQLKEKNGDVIELKYPLNCADPTSERWFHGHLSGKEAEK 124
Query: 545 LLQAKGEPWTFLVRESLSQPGDFVLSVLS--DQPKAGPGSPLKVTHIKVMCEGGRYTVGG 718
LL KG+ +FLVRES S PGDFVLSV + D+ ++ G KVTH+ + C+ +Y VGG
Sbjct: 125 LLTEKGKHGSFLVRESQSHPGDFVLSVRTGDDKGESNDGKS-KVTHVMIRCQELKYDVGG 183
Query: 719 PETFDSLTDLVEHFKKTGIEEASGAFVYLRQPYYATRVNAADIENRVLELNQKQESEETA 898
E FDSLTDLVEH+KK + E G + L+QP TR+NAA+IE+RV EL++ E+ +
Sbjct: 184 GERFDSLTDLVEHYKKNPMVETLGTVLQLKQPLNTTRINAAEIESRVRELSKLAETTDKV 243
Query: 899 KAGFWEEFESLQKQEVKNLHQRLEGQRPKNKSKNRYQNIFHSTQPSDPARDGTVTSLGPD 1078
K GFWEEFE+LQ+QE K L+ R EGQR +NK+KNRY+NI DG D
Sbjct: 244 KQGFWEEFETLQQQECKLLYSRKEGQRQENKNKNRYKNILPFDHTRVVLHDGDPNEPVSD 303
Query: 1079 YFNPTYV 1099
Y N +
Sbjct: 304 YINANII 310
Score = 93.2 bits (230), Expect = 4e-19
Identities = 52/113 (46%), Positives = 70/113 (61%), Gaps = 10/113 (8%)
Frame = +2
Query: 173 PRMVRWFHRDLSGLDAETLLKGRGVHGSFLARPSRKNQGDFSLSVRVGD----------Q 322
P RWFH LSG +AE LL +G HGSFL R S+ + GDF LSVR GD +
Sbjct: 107 PTSERWFHGHLSGKEAEKLLTEKGKHGSFLVRESQSHPGDFVLSVRTGDDKGESNDGKSK 166
Query: 323 VTHIRIQNSGDFYDLYGGEKFATLTELVEYYTQQQGVLQDRDGTIIHLKYPLN 481
VTH+ I+ YD+ GGE+F +LT+LVE+Y ++ + + GT++ LK PLN
Sbjct: 167 VTHVMIRCQELKYDVGGGERFDSLTDLVEHY--KKNPMVETLGTVLQLKQPLN 217
Score = 68.9 bits (167), Expect = 8e-12
Identities = 43/119 (36%), Positives = 65/119 (54%), Gaps = 2/119 (1%)
Frame = +2
Query: 494 TSERWYHGHMSGGQAETLLQAKGEPWTFLVRESLSQPGDFVLSVLSDQPKAGPGSPLKVT 673
TS RW+H +++G +AE LL +G +FL R S S PGDF LSV + VT
Sbjct: 2 TSRRWFHPNITGVEAENLLLTRGVDGSFLARPSKSNPGDFTLSVRRNG---------AVT 52
Query: 674 HIKVMCEGGRYTVGGPETFDSLTDLVEHFKK--TGIEEASGAFVYLRQPYYATRVNAAD 844
HIK+ G Y + G E F +L +LV+++ + ++E +G + L+ P +N AD
Sbjct: 53 HIKIQNTGDYYDLYGGEKFATLAELVQYYMEHHGQLKEKNGDVIELKYP-----LNCAD 106
>ref|NP_002651.2| 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma-1
isoform a [Homo sapiens].
Length = 1291
Score = 65.9 bits (159), Expect = 7e-11
Identities = 63/215 (29%), Positives = 98/215 (45%), Gaps = 21/215 (9%)
Frame = +2
Query: 185 RWFHRDL-SGLD----AETLLKGRGVH-----GSFLARPSRKNQGDFSLSVRVGDQVTHI 334
+WFH L +G D AE LL + GSFL R S GD++LS +V H
Sbjct: 549 KWFHGKLGAGRDGRHIAERLLTEYCIETGAPDGSFLVRESETFVGDYTLSFWRNGKVQHC 608
Query: 335 RIQNSGDF----YDLYGGEKFATLTELVEYYTQQQGVLQDRDGTIIHLKYPLNCSDPT-- 496
RI + D + L F +L +L+ +Y QQ L+ + + + S+P
Sbjct: 609 RIHSRQDAGTPKFFLTDNLVFDSLYDLITHY--QQVPLRCNE-------FEMRLSEPVPQ 659
Query: 497 -----SERWYHGHMSGGQAETLLQAKGEPWTFLVRESLSQPGDFVLSVLSDQPKAGPGSP 661
S+ WYH ++ QAE +L FLVR+ ++P + +S ++
Sbjct: 660 TNAHESKEWYHASLTRAQAEHMLMRVPRDGAFLVRKR-NEPNSYAISFRAEG-------- 710
Query: 662 LKVTHIKVMCEGGRYTVGGPETFDSLTDLVEHFKK 766
K+ H +V EG +G E FDSL DL+ +++K
Sbjct: 711 -KIKHCRVQQEGQTVMLGNSE-FDSLVDLISYYEK 743
>ref|NP_877963.1| 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma-1
isoform b [Homo sapiens].
Length = 1290
Score = 65.9 bits (159), Expect = 7e-11
Identities = 63/215 (29%), Positives = 98/215 (45%), Gaps = 21/215 (9%)
Frame = +2
Query: 185 RWFHRDL-SGLD----AETLLKGRGVH-----GSFLARPSRKNQGDFSLSVRVGDQVTHI 334
+WFH L +G D AE LL + GSFL R S GD++LS +V H
Sbjct: 549 KWFHGKLGAGRDGRHIAERLLTEYCIETGAPDGSFLVRESETFVGDYTLSFWRNGKVQHC 608
Query: 335 RIQNSGDF----YDLYGGEKFATLTELVEYYTQQQGVLQDRDGTIIHLKYPLNCSDPT-- 496
RI + D + L F +L +L+ +Y QQ L+ + + + S+P
Sbjct: 609 RIHSRQDAGTPKFFLTDNLVFDSLYDLITHY--QQVPLRCNE-------FEMRLSEPVPQ 659
Query: 497 -----SERWYHGHMSGGQAETLLQAKGEPWTFLVRESLSQPGDFVLSVLSDQPKAGPGSP 661
S+ WYH ++ QAE +L FLVR+ ++P + +S ++
Sbjct: 660 TNAHESKEWYHASLTRAQAEHMLMRVPRDGAFLVRKR-NEPNSYAISFRAEG-------- 710
Query: 662 LKVTHIKVMCEGGRYTVGGPETFDSLTDLVEHFKK 766
K+ H +V EG +G E FDSL DL+ +++K
Sbjct: 711 -KIKHCRVQQEGQTVMLGNSE-FDSLVDLISYYEK 743
>ref|NP_004801.1| GRB2-related adapter protein 2 [Homo sapiens].
Length = 330
Score = 63.9 bits (154), Expect = 3e-10
Identities = 40/95 (42%), Positives = 56/95 (58%), Gaps = 8/95 (8%)
Frame = +2
Query: 185 RWFHRDLSGLDAETLLKGRGVHGSFLARPSRKNQGDFSLSVRVGDQVTHIRI--QNSGDF 358
+WFH LS AE LL G+ V G F+ R S+ + GDFS+SVR D V H ++ N G++
Sbjct: 57 KWFHEGLSRHQAENLLMGKEV-GFFIIRASQSSPGDFSISVRHEDDVQHFKVMRDNKGNY 115
Query: 359 YDLYGGEKFATLTELVEYY------TQQQGVLQDR 445
+ EKF +L +LV+YY Q+Q L+DR
Sbjct: 116 F--LWTEKFPSLNKLVDYYRTNSISRQKQIFLRDR 148
Score = 52.0 bits (123), Expect = 1e-06
Identities = 44/150 (29%), Positives = 67/150 (44%), Gaps = 1/150 (0%)
Frame = +2
Query: 353 DFYDLYGGEKFATLTELVEYYTQQQGVLQDRDGTIIHLKYPLNCSDPTSERWYHGHMSGG 532
D + G+ L+ E++ + G ++G + P N D +W+H +S
Sbjct: 15 DELSFHTGDVLKILSNQEEWFKAELG---SQEGYV-----PKNFIDIQFPKWFHEGLSRH 66
Query: 533 QAETLLQAKGEPWTFLVRESLSQPGDFVLSVLSDQPKAGPGSPLKVTHIKVMCEG-GRYT 709
QAE LL K E F++R S S PGDF +SV + V H KVM + G Y
Sbjct: 67 QAENLLMGK-EVGFFIIRASQSSPGDFSISVRHED---------DVQHFKVMRDNKGNYF 116
Query: 710 VGGPETFDSLTDLVEHFKKTGIEEASGAFV 799
+ E F SL LV++++ I F+
Sbjct: 117 L-WTEKFPSLNKLVDYYRTNSISRQKQIFL 145
>ref|NP_055210.2| dual adapter for phosphotyrosine and 3-phosphotyrosine and
3-phosphoinositide [Homo sapiens].
Length = 280
Score = 62.0 bits (149), Expect = 1e-09
Identities = 33/96 (34%), Positives = 56/96 (58%)
Frame = +2
Query: 188 WFHRDLSGLDAETLLKGRGVHGSFLARPSRKNQGDFSLSVRVGDQVTHIRIQNSGDFYDL 367
W+H +L+ AE LL G GS+L R S + G +SLSVR D V H ++ +G +
Sbjct: 35 WYHGNLTRHAAEALLLSNGCDGSYLLRDSNETTGLYSLSVRAKDSVKHFHVEYTGYSFK- 93
Query: 368 YGGEKFATLTELVEYYTQQQGVLQDRDGTIIHLKYP 475
+G +F++L + V+++ Q ++ GT++ LK+P
Sbjct: 94 FGFNEFSSLKDFVKHFANQP-LIGSETGTLMVLKHP 128
>ref|NP_002652.2| 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma-2
[Homo sapiens].
Length = 1265
Score = 58.5 bits (140), Expect = 1e-08
Identities = 53/211 (25%), Positives = 94/211 (44%), Gaps = 17/211 (8%)
Frame = +2
Query: 185 RWFHRDLSG-LDAETLLKGR-----GVHGSFLARPSRKNQGDFSLSVRVGDQVTHIRIQN 346
+WFH+ + AE LL+ G G+FL R S D++LS +V H RI++
Sbjct: 531 KWFHKKVEKRTSAEKLLQEYCMETGGKDGTFLVRESETFPNDYTLSFWRSGRVQHCRIRS 590
Query: 347 SGD----FYDLYGGEKFATLTELVEYYTQQQGVLQDRDGTIIHLKYPLNCSDPT------ 496
+ + Y L F+++ L+++Y R+ + ++ L +DP
Sbjct: 591 TMEGGTLKYYLTDNLTFSSIYALIQHY---------RETHLRCAEFELRLTDPVPNPNPH 641
Query: 497 -SERWYHGHMSGGQAETLLQAKGEPWTFLVRESLSQPGDFVLSVLSDQPKAGPGSPLKVT 673
S+ WY+ +S G+AE +L FL+R+ SD + KV
Sbjct: 642 ESKPWYYDSLSRGEAEDMLMRIPRDGAFLIRKREG----------SDSYAITFRARGKVK 691
Query: 674 HIKVMCEGGRYTVGGPETFDSLTDLVEHFKK 766
H ++ +G + +G F+SL +LV +++K
Sbjct: 692 HCRINRDGRHFVLGTSAYFESLVELVSYYEK 722
>ref|NP_002881.1| ras GTPase-activating protein 1 isoform 1 [Homo sapiens].
Length = 1047
Score = 57.8 bits (138), Expect = 2e-08
Identities = 32/90 (35%), Positives = 49/90 (54%)
Frame = +2
Query: 491 PTSERWYHGHMSGGQAETLLQAKGEPWTFLVRESLSQPGDFVLSVLSDQPKAGPGSPLKV 670
P + +WYHG + AE L+ G+ ++L+RES +PG FVLS LS V
Sbjct: 176 PPTNQWYHGKLDRTIAEERLRQAGKSGSYLIRESDRRPGSFVLSFLSQMN--------VV 227
Query: 671 THIKVMCEGGRYTVGGPETFDSLTDLVEHF 760
H +++ G Y +GG F SL+DL+ ++
Sbjct: 228 NHFRIIAMCGDYYIGG-RRFSSLSDLIGYY 256
Score = 53.1 bits (126), Expect = 5e-07
Identities = 37/113 (32%), Positives = 57/113 (50%), Gaps = 2/113 (1%)
Frame = +2
Query: 173 PRMVRWFHRDLSGLDAETLLKGRGVHGSFLARPSRKNQGDFSLS-VRVGDQVTHIR-IQN 346
P +W+H L AE L+ G GS+L R S + G F LS + + V H R I
Sbjct: 176 PPTNQWYHGKLDRTIAEERLRQAGKSGSYLIRESDRRPGSFVLSFLSQMNVVNHFRIIAM 235
Query: 347 SGDFYDLYGGEKFATLTELVEYYTQQQGVLQDRDGTIIHLKYPLNCSDPTSER 505
GD+Y GG +F++L++L+ YY+ +L+ L YP+ +P +R
Sbjct: 236 CGDYY--IGGRRFSSLSDLIGYYSHVSCLLKGE-----KLLYPVAPPEPVEDR 281
Score = 49.7 bits (117), Expect = 5e-06
Identities = 49/225 (21%), Positives = 95/225 (42%), Gaps = 3/225 (1%)
Frame = +2
Query: 374 GEKFATLTELVEYYTQQQGVLQDRDGTIIH--LKYPLNCSDPTSER-WYHGHMSGGQAET 544
G+ F EL + + + D G I+ ++ DP + W+HG +S +A
Sbjct: 304 GDMFIVHNELEDGWMWVTNLRTDEQGLIVEDLVEEVGREEDPHEGKIWFHGKISKQEAYN 363
Query: 545 LLQAKGEPWTFLVRESLSQPGDFVLSVLSDQPKAGPGSPLKVTHIKVMCEGGRYTVGGPE 724
LL G+ +FLVR S + PGD+ L +++ + K+ + G
Sbjct: 364 LLMTVGQVCSFLVRPSDNTPGDYSLYFRTNE---------NIQRFKICPTPNNQFMMGGR 414
Query: 725 TFDSLTDLVEHFKKTGIEEASGAFVYLRQPYYATRVNAADIENRVLELNQKQESEETAKA 904
++S+ D+++H++K I E YL++P ++++ LN + +E
Sbjct: 415 YYNSIGDIIDHYRKEQIVEG----YYLKEP--------VPMQDQEQVLNDTVDGKEIYNT 462
Query: 905 GFWEEFESLQKQEVKNLHQRLEGQRPKNKSKNRYQNIFHSTQPSD 1039
+ ++ K VK +G K R++N++ + SD
Sbjct: 463 IRRKTKDAFYKNIVK------KGYLLKKGKGKRWKNLYFILEGSD 501
Score = 49.3 bits (116), Expect = 7e-06
Identities = 24/80 (30%), Positives = 43/80 (53%)
Frame = +2
Query: 188 WFHRDLSGLDAETLLKGRGVHGSFLARPSRKNQGDFSLSVRVGDQVTHIRIQNSGDFYDL 367
WFH +S +A LL G SFL RPS GD+SL R + + +I + + +
Sbjct: 351 WFHGKISKQEAYNLLMTVGQVCSFLVRPSDNTPGDYSLYFRTNENIQRFKICPTPNNQFM 410
Query: 368 YGGEKFATLTELVEYYTQQQ 427
GG + ++ +++++Y ++Q
Sbjct: 411 MGGRYYNSIGDIIDHYRKEQ 430
Database: RefSeq49_HP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,297,164
Number of sequences in database: 32,964
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 32964
Number of Hits to DB: 45,629,077
Number of extensions: 1299685
Number of successful extensions: 7456
Number of sequences better than 1.0e-05: 45
Number of HSP's gapped: 7289
Number of HSP's successfully gapped: 66
Length of query: 379
Length of database: 18,297,164
Length adjustment: 104
Effective length of query: 275
Effective length of database: 14,868,908
Effective search space: 4088949700
Effective search space used: 4088949700
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to Sscrofa10_2
BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-012859
(1139 letters)
Database: Sscrofa_10.2.fasta
4582 sequences; 2,808,509,378 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Sscrofa_Chr05 398 e-108
>Sscrofa_Chr05
|| Length = 111506441
Score = 398 bits (201), Expect = e-108
Identities = 201/201 (100%)
Strand = Plus / Minus
Query: 307 cagggtgggggatcaggtgacccatattcggatccagaactcgggggatttctacgacct 366
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 66208201 cagggtgggggatcaggtgacccatattcggatccagaactcgggggatttctacgacct 66208142
Query: 367 gtatggaggggagaagtttgcgacgctgacggagctggtggagtattacacgcagcagca 426
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 66208141 gtatggaggggagaagtttgcgacgctgacggagctggtggagtattacacgcagcagca 66208082
Query: 427 gggcgtcctgcaggaccgagacggcacaatcatccacctcaagtacccgctgaactgctc 486
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 66208081 gggcgtcctgcaggaccgagacggcacaatcatccacctcaagtacccgctgaactgctc 66208022
Query: 487 ggaccccaccagtgagaggtg 507
|||||||||||||||||||||
Sbjct: 66208021 ggaccccaccagtgagaggtg 66208001
Score = 383 bits (193), Expect = e-103
Identities = 193/193 (100%)
Strand = Plus / Minus
Query: 503 aggtggtaccatggccacatgtctggagggcaggcagagacactgctgcaggccaagggt 562
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 66205526 aggtggtaccatggccacatgtctggagggcaggcagagacactgctgcaggccaagggt 66205467
Query: 563 gagccctggacatttcttgtgcgtgagagtctcagccagcctggagattttgtgctgtct 622
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 66205466 gagccctggacatttcttgtgcgtgagagtctcagccagcctggagattttgtgctgtct 66205407
Query: 623 gtgctcagcgaccagcccaaggctggcccgggatccccactcaaagtcacccatatcaag 682
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 66205406 gtgctcagcgaccagcccaaggctggcccgggatccccactcaaagtcacccatatcaag 66205347
Query: 683 gtcatgtgtgagg 695
|||||||||||||
Sbjct: 66205346 gtcatgtgtgagg 66205334
Score = 305 bits (154), Expect = 3e-80
Identities = 154/154 (100%)
Strand = Plus / Minus
Query: 35 cagaaccaggaccgcgggtggcgggcggtggggtggcctgagtgctgagagccgcgggag 94
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 66208733 cagaaccaggaccgcgggtggcgggcggtggggtggcctgagtgctgagagccgcgggag 66208674
Query: 95 gcttagccccggcattctcctcttgtctggactcagtggcatcatctccttgcctgtacc 154
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 66208673 gcttagccccggcattctcctcttgtctggactcagtggcatcatctccttgcctgtacc 66208614
Query: 155 ccctccccgccggggcaccccaggatggtgaggt 188
||||||||||||||||||||||||||||||||||
Sbjct: 66208613 ccctccccgccggggcaccccaggatggtgaggt 66208580
Score = 234 bits (118), Expect = 9e-59
Identities = 124/126 (98%)
Strand = Plus / Minus
Query: 185 aggtggtttcaccgagacctcagcgggctggatgcagagaccctgctcaagggccgaggg 244
||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||
Sbjct: 66208497 aggtggtttcaccgagacctcagtgggctggatgctgagaccctgctcaagggccgaggg 66208438
Query: 245 gtccacggcagcttcctggctcggcccagtcgcaagaaccagggcgacttctccctctct 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 66208437 gtccacggcagcttcctggctcggcccagtcgcaagaaccagggcgacttctccctctct 66208378
Query: 305 gtcagg 310
||||||
Sbjct: 66208377 gtcagg 66208372
Score = 228 bits (115), Expect = 5e-57
Identities = 118/119 (99%)
Strand = Plus / Minus
Query: 693 agggtggccgctacacagtggggggtcctgagaccttcgacagcctcacggacctggtgg 752
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 66205180 agggtggccgctacacagtggggggtcccgagaccttcgacagcctcacggacctggtgg 66205121
Query: 753 agcacttcaagaagacggggattgaggaggcctcgggcgccttcgtctacctgcggcag 811
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 66205120 agcacttcaagaagacggggattgaggaggcctcgggcgccttcgtctacctgcggcag 66205062
Score = 216 bits (109), Expect = 2e-53
Identities = 115/117 (98%)
Strand = Plus / Minus
Query: 809 cagccatactatgccacgagggtgaacgcggctgacatcgagaaccgggtcttggaactg 868
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 66204979 cagccatactatgccacgagggtgaacgcggctgacatcgagaaccgggtcttggaactg 66204920
Query: 869 aaccagaagcaggagtcagaggagacagccaaggccggcttctgggaagagtttgag 925
||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 66204919 aacaagaagcaggagtcagaggagacagccaaggccggcttctgggaggagtttgag 66204863
Score = 167 bits (84), Expect = 2e-38
Identities = 90/92 (97%)
Strand = Plus / Minus
Query: 924 agagtctgcagaagcaggaggtgaagaacttgcaccagcggctggaagggcagcggccaa 983
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 66204705 agagtctgcagaagcaggaggtgaagaacttgcaccagcggctggaagggcagcggccag 66204646
Query: 984 aaaacaagagcaagaatcgttaccagaacatc 1015
||||||||||||||||||||||| ||||||||
Sbjct: 66204645 aaaacaagagcaagaatcgttacaagaacatc 66204614
Score = 87.7 bits (44), Expect = 1e-14
Identities = 70/76 (92%), Gaps = 2/76 (2%)
Strand = Plus / Minus
Query: 1026 cacagccgagtgatcctgccagggacgggacagtaacatccctgggtcctgactacttta 1085
||||||||||||||||||| ||||||||||||||||||||||||||| |||||||| |||
Sbjct: 66204225 cacagccgagtgatcctgc-agggacgggacagtaacatccctgggt-ctgactacatta 66204168
Query: 1086 accccacttatgtcaa 1101
|| ||| ||||||||
Sbjct: 66204167 acgccaactatgtcaa 66204152
Database: Sscrofa_10.2.fasta
Posted date: Nov 16, 2011 10:34 AM
Number of letters in database: 2,808,509,378
Number of sequences in database: 4582
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4582
Number of Hits to DB: 28,365,213
Number of extensions: 160
Number of successful extensions: 160
Number of sequences better than 1.0e-05: 1
Number of HSP's gapped: 159
Number of HSP's successfully gapped: 8
Length of query: 1139
Length of database: 2,808,509,378
Length adjustment: 21
Effective length of query: 1118
Effective length of database: 2,808,413,156
Effective search space: 3139805908408
Effective search space used: 3139805908408
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 18 (36.2 bits)
S2: 30 (60.0 bits)