Search to RefSeqBP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-012863
(1231 letters)
Database: RefSeq49_BP.fasta
33,088 sequences; 17,681,374 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_776458.1| cytochrome b5 [Bos taurus]. 256 4e-68
Alignment gi|NP_001157254.1| cytochrome b5 type B (outer mitochondrial me... 143 3e-34
Alignment gi|XP_002706872.1| PREDICTED: cytochrome b-5-like [Bos taurus]. 88 2e-17
Alignment gi|XP_002693751.1| PREDICTED: rCG26407-like [Bos taurus]. 73 5e-13
Alignment gi|XP_599338.4| PREDICTED: rCG26407-like [Bos taurus]. 73 5e-13
Alignment gi|XP_002693779.1| PREDICTED: fatty acid desaturase 2-like [Bos... 72 1e-12
Alignment gi|XP_871845.3| PREDICTED: fatty acid desaturase 2-like [Bos ta... 72 1e-12
Alignment gi|NP_001076913.1| fatty acid desaturase 2 [Bos taurus]. 71 2e-12
Alignment gi|XP_002699331.1| PREDICTED: fatty acid desaturase 1 [Bos taur... 60 5e-09
Alignment gi|XP_612398.4| PREDICTED: fatty acid desaturase 1 [Bos taurus]. 60 5e-09
>ref|NP_776458.1| cytochrome b5 [Bos taurus].
Length = 134
Score = 256 bits (653), Expect = 4e-68
Identities = 120/134 (89%), Positives = 129/134 (96%)
Frame = +1
Query: 130 MAEQSDKAVKYYTLEEIQKHNNSKSTWLILHHKVYDLTKFLEEHPGGEEVLREQAGGDAT 309
MAE+S KAVKYYTLEEIQKHNNSKSTWLILH+KVYDLTKFLEEHPGGEEVLREQAGGDAT
Sbjct: 1 MAEESSKAVKYYTLEEIQKHNNSKSTWLILHYKVYDLTKFLEEHPGGEEVLREQAGGDAT 60
Query: 310 ENFEDVGHSTDARELSKTFIIGELHPDDRSKIAKPSETLITTVESNSSWWTNWVIPAISA 489
ENFEDVGHSTDARELSKTFIIGELHPDDRSKI KPSE++ITT++SN SWWTNW+IPAISA
Sbjct: 61 ENFEDVGHSTDARELSKTFIIGELHPDDRSKITKPSESIITTIDSNPSWWTNWLIPAISA 120
Query: 490 LVVSLMYHFYTSEN 531
L V+L+YH YTSEN
Sbjct: 121 LFVALIYHLYTSEN 134
>ref|NP_001157254.1| cytochrome b5 type B (outer mitochondrial membrane) [Bos taurus].
Length = 146
Score = 143 bits (361), Expect = 3e-34
Identities = 64/131 (48%), Positives = 95/131 (72%), Gaps = 2/131 (1%)
Frame = +1
Query: 145 DKAVKYYTLEEIQKHNNSKSTWLILHHKVYDLTKFLEEHPGGEEVLREQAGGDATENFED 324
+ +V YY LEE+ K N+ K WL++H +VYD+++FL+EHPGGEEVL EQAGGDATE+FED
Sbjct: 17 ETSVTYYRLEEVAKRNSPKDIWLVIHGRVYDVSRFLDEHPGGEEVLMEQAGGDATESFED 76
Query: 325 VGHSTDARELSKTFIIGELHPDDRSKIAKPSETLITTVESNS--SWWTNWVIPAISALVV 498
VGHS+DARE+ K + IG++HP+D KP +SN+ S+W+ W+ P + A+++
Sbjct: 77 VGHSSDAREMLKQYYIGDVHPND----LKPGGGSKEPPKSNTCKSYWSYWIFPIVGAILL 132
Query: 499 SLMYHFYTSEN 531
+Y +Y +E+
Sbjct: 133 GFLYRYYMAES 143
>ref|XP_002706872.1| PREDICTED: cytochrome b-5-like [Bos taurus].
Length = 48
Score = 87.8 bits (216), Expect = 2e-17
Identities = 41/46 (89%), Positives = 43/46 (93%)
Frame = +1
Query: 130 MAEQSDKAVKYYTLEEIQKHNNSKSTWLILHHKVYDLTKFLEEHPG 267
MAE+S KAVKYYTLEEIQKHNNSKSTWLILH+KVYDLTKFLEE G
Sbjct: 1 MAEESSKAVKYYTLEEIQKHNNSKSTWLILHYKVYDLTKFLEERRG 46
>ref|XP_002693751.1| PREDICTED: rCG26407-like [Bos taurus].
Length = 485
Score = 73.2 bits (178), Expect = 5e-13
Identities = 36/95 (37%), Positives = 56/95 (58%), Gaps = 1/95 (1%)
Frame = +1
Query: 148 KAVKYYTLEEIQKHNNSKSTWLILHHKVYDLTKFLEEHPGGEEVLREQAGGDATENFEDV 327
K++ YT +EIQ+HN WL+++ KVYD+T + + HPGG VL AG DAT+ F +
Sbjct: 54 KSLSTYTWQEIQRHNQKTDKWLVINRKVYDVTGWADRHPGGRRVLNHCAGEDATDVFRAM 113
Query: 328 GHSTDAREL-SKTFIIGELHPDDRSKIAKPSETLI 429
D +L K +IGEL P++ ++ + L+
Sbjct: 114 HPDPDIVQLYLKPLLIGELAPEEPNQERNKNSQLV 148
>ref|XP_599338.4| PREDICTED: rCG26407-like [Bos taurus].
Length = 485
Score = 73.2 bits (178), Expect = 5e-13
Identities = 36/95 (37%), Positives = 56/95 (58%), Gaps = 1/95 (1%)
Frame = +1
Query: 148 KAVKYYTLEEIQKHNNSKSTWLILHHKVYDLTKFLEEHPGGEEVLREQAGGDATENFEDV 327
K++ YT +EIQ+HN WL+++ KVYD+T + + HPGG VL AG DAT+ F +
Sbjct: 54 KSLSTYTWQEIQRHNQKTDKWLVINRKVYDVTGWADRHPGGRRVLNHCAGEDATDVFRAM 113
Query: 328 GHSTDAREL-SKTFIIGELHPDDRSKIAKPSETLI 429
D +L K +IGEL P++ ++ + L+
Sbjct: 114 HPDPDIVQLYLKPLLIGELAPEEPNQERNKNSQLV 148
>ref|XP_002693779.1| PREDICTED: fatty acid desaturase 2-like [Bos taurus].
Length = 485
Score = 71.6 bits (174), Expect = 1e-12
Identities = 36/95 (37%), Positives = 55/95 (57%), Gaps = 1/95 (1%)
Frame = +1
Query: 148 KAVKYYTLEEIQKHNNSKSTWLILHHKVYDLTKFLEEHPGGEEVLREQAGGDATENFEDV 327
K++ YT +EIQ+HN WL+++ KVYD+T + + HPGG VL AG DAT+ F +
Sbjct: 54 KSLSTYTWQEIQRHNQETDQWLVINRKVYDVTGWADRHPGGRLVLNHCAGEDATDVFRAM 113
Query: 328 GHSTD-ARELSKTFIIGELHPDDRSKIAKPSETLI 429
D R K +IGEL P++ ++ + L+
Sbjct: 114 HPDPDIVRLYLKPLLIGELAPEEPNQERNKNSQLV 148
>ref|XP_871845.3| PREDICTED: fatty acid desaturase 2-like [Bos taurus].
Length = 485
Score = 71.6 bits (174), Expect = 1e-12
Identities = 36/95 (37%), Positives = 55/95 (57%), Gaps = 1/95 (1%)
Frame = +1
Query: 148 KAVKYYTLEEIQKHNNSKSTWLILHHKVYDLTKFLEEHPGGEEVLREQAGGDATENFEDV 327
K++ YT +EIQ+HN WL+++ KVYD+T + + HPGG VL AG DAT+ F +
Sbjct: 54 KSLSTYTWQEIQRHNQETDQWLVINRKVYDVTGWADRHPGGRLVLNHCAGEDATDVFRAM 113
Query: 328 GHSTD-ARELSKTFIIGELHPDDRSKIAKPSETLI 429
D R K +IGEL P++ ++ + L+
Sbjct: 114 HPDPDIVRLYLKPLLIGELAPEEPNQERNKNSQLV 148
>ref|NP_001076913.1| fatty acid desaturase 2 [Bos taurus].
Length = 444
Score = 71.2 bits (173), Expect = 2e-12
Identities = 37/98 (37%), Positives = 56/98 (57%), Gaps = 1/98 (1%)
Frame = +1
Query: 112 GSPRYEMAEQSDKAVKYYTLEEIQKHNNSKSTWLILHHKVYDLTKFLEEHPGGEEVLREQ 291
G + E A + + + + EEIQKHN WL++ KVY++TK+ HPGG+ V+
Sbjct: 4 GGNQDEGATELEAPMPTFRWEEIQKHNLRTDKWLVIDRKVYNITKWSSRHPGGQRVIGHY 63
Query: 292 AGGDATENFEDVGHSTD-ARELSKTFIIGELHPDDRSK 402
AG DAT+ F + D R+ K +IGEL P++ S+
Sbjct: 64 AGEDATDAFLAFHRNLDFVRKFMKPLLIGELAPEEPSQ 101
>ref|XP_002699331.1| PREDICTED: fatty acid desaturase 1 [Bos taurus].
Length = 440
Score = 59.7 bits (143), Expect = 5e-09
Identities = 29/83 (34%), Positives = 48/83 (57%), Gaps = 2/83 (2%)
Frame = +1
Query: 157 KYYTLEEI-QKHNNSKSTWLILHHKVYDLTKFLEEHPGGEEVLREQAGGDATENFEDVGH 333
+Y+T +E+ Q+ K WL++ KVY++++F+ HPGG V+ AG DAT+ F
Sbjct: 13 RYFTWDEVAQRSGREKERWLVIDRKVYNISEFVRRHPGGSRVISHYAGQDATDPFVAFHI 72
Query: 334 STD-ARELSKTFIIGELHPDDRS 399
+ R+ + +IGEL P+ S
Sbjct: 73 NKGLVRKYMNSLLIGELSPEQPS 95
>ref|XP_612398.4| PREDICTED: fatty acid desaturase 1 [Bos taurus].
Length = 440
Score = 59.7 bits (143), Expect = 5e-09
Identities = 29/83 (34%), Positives = 48/83 (57%), Gaps = 2/83 (2%)
Frame = +1
Query: 157 KYYTLEEI-QKHNNSKSTWLILHHKVYDLTKFLEEHPGGEEVLREQAGGDATENFEDVGH 333
+Y+T +E+ Q+ K WL++ KVY++++F+ HPGG V+ AG DAT+ F
Sbjct: 13 RYFTWDEVAQRSGREKERWLVIDRKVYNISEFVRRHPGGSRVISHYAGQDATDPFVAFHI 72
Query: 334 STD-ARELSKTFIIGELHPDDRS 399
+ R+ + +IGEL P+ S
Sbjct: 73 NKGLVRKYMNSLLIGELSPEQPS 95
Database: RefSeq49_BP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 17,681,374
Number of sequences in database: 33,088
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33088
Number of Hits to DB: 43,255,639
Number of extensions: 1049996
Number of successful extensions: 3148
Number of sequences better than 1.0e-05: 15
Number of HSP's gapped: 3139
Number of HSP's successfully gapped: 15
Length of query: 410
Length of database: 17,681,374
Length adjustment: 105
Effective length of query: 305
Effective length of database: 14,207,134
Effective search space: 4333175870
Effective search space used: 4333175870
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Animal-Genome cDNA 20110601C-012863
Search to RefSeqCP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-012863
(1231 letters)
Database: RefSeq49_CP.fasta
33,336 sequences; 18,874,504 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001180227.1| cytochrome b5A microsomal variant [Canis lup... 263 3e-70
Alignment gi|XP_854189.1| PREDICTED: similar to Cytochrome b5 [Canis fami... 236 4e-62
Alignment gi|XP_853630.1| PREDICTED: similar to cytochrome b5 outer mitoc... 144 2e-34
Alignment gi|XP_540913.2| PREDICTED: similar to fatty acid desaturase 2 [... 71 2e-12
Alignment gi|XP_540914.2| PREDICTED: similar to fatty acid desaturase 1 i... 62 1e-09
Alignment gi|XP_867837.1| PREDICTED: similar to fatty acid desaturase 1 i... 62 1e-09
Alignment gi|XP_853014.1| PREDICTED: similar to fatty acid 2-hydroxylase ... 58 2e-08
Alignment gi|XP_532219.2| PREDICTED: similar to NADPH cytochrome B5 oxido... 56 6e-08
Alignment gi|XP_533270.2| PREDICTED: similar to fatty acid desaturase 3 [... 51 3e-06
Alignment gi|XP_538224.2| PREDICTED: similar to Sulfite oxidase, mitochon... 51 3e-06
>ref|NP_001180227.1| cytochrome b5A microsomal variant [Canis lupus familiaris].
Length = 134
Score = 263 bits (672), Expect = 3e-70
Identities = 125/134 (93%), Positives = 132/134 (98%)
Frame = +1
Query: 130 MAEQSDKAVKYYTLEEIQKHNNSKSTWLILHHKVYDLTKFLEEHPGGEEVLREQAGGDAT 309
MAEQSD+ VKYYTLEEIQKHN+SKSTWLILHHKVYDLTKFLEEHPGGEEVLREQAGGDAT
Sbjct: 1 MAEQSDQTVKYYTLEEIQKHNHSKSTWLILHHKVYDLTKFLEEHPGGEEVLREQAGGDAT 60
Query: 310 ENFEDVGHSTDARELSKTFIIGELHPDDRSKIAKPSETLITTVESNSSWWTNWVIPAISA 489
ENFEDVGHSTDARELSKTFIIGELHPDDR+KI KPSETLITTV+SNSSWWTNWVIPAISA
Sbjct: 61 ENFEDVGHSTDARELSKTFIIGELHPDDRAKINKPSETLITTVDSNSSWWTNWVIPAISA 120
Query: 490 LVVSLMYHFYTSEN 531
LVV+LMYHFYT+E+
Sbjct: 121 LVVALMYHFYTAED 134
>ref|XP_854189.1| PREDICTED: similar to Cytochrome b5 [Canis familiaris].
Length = 234
Score = 236 bits (601), Expect = 4e-62
Identities = 111/127 (87%), Positives = 122/127 (96%)
Frame = +1
Query: 151 AVKYYTLEEIQKHNNSKSTWLILHHKVYDLTKFLEEHPGGEEVLREQAGGDATENFEDVG 330
AV ++ +EIQKHN+SKSTWLILHHKVYDLTKFLEEHP GEEVLREQAGGDATENFEDVG
Sbjct: 108 AVTPHSQKEIQKHNHSKSTWLILHHKVYDLTKFLEEHPSGEEVLREQAGGDATENFEDVG 167
Query: 331 HSTDARELSKTFIIGELHPDDRSKIAKPSETLITTVESNSSWWTNWVIPAISALVVSLMY 510
HSTDARELSKT+I+GELHPDDR+KI KPSETLITTV+SNSSWWTNWVIPAISALVV+LMY
Sbjct: 168 HSTDARELSKTYIVGELHPDDRAKINKPSETLITTVDSNSSWWTNWVIPAISALVVALMY 227
Query: 511 HFYTSEN 531
HFYT+E+
Sbjct: 228 HFYTAED 234
>ref|XP_853630.1| PREDICTED: similar to cytochrome b5 outer mitochondrial membrane
precursor [Canis familiaris].
Length = 146
Score = 144 bits (362), Expect = 2e-34
Identities = 68/132 (51%), Positives = 93/132 (70%), Gaps = 3/132 (2%)
Frame = +1
Query: 145 DKAVKYYTLEEIQKHNNSKSTWLILHHKVYDLTKFLEEHPGGEEVLREQAGGDATENFED 324
+ AV YY LEE+ K N+ K WL++H +VYD+T FL+EHPGGEEVL EQAG DA+E+FED
Sbjct: 17 EAAVTYYRLEEVAKRNSLKEIWLVIHGRVYDVTDFLKEHPGGEEVLLEQAGADASESFED 76
Query: 325 VGHSTDARELSKTFIIGELHPDD---RSKIAKPSETLITTVESNSSWWTNWVIPAISALV 495
VGHS+DARE+ K + IG++HPDD S PS+ + S W+ W++P I A+V
Sbjct: 77 VGHSSDAREMLKQYYIGDVHPDDLKPESGSKDPSKD-----ATCKSCWSYWILPIIGAIV 131
Query: 496 VSLMYHFYTSEN 531
+ +Y +YTSE+
Sbjct: 132 LGFLYRYYTSES 143
>ref|XP_540913.2| PREDICTED: similar to fatty acid desaturase 2 [Canis familiaris].
Length = 472
Score = 70.9 bits (172), Expect = 2e-12
Identities = 36/98 (36%), Positives = 54/98 (55%), Gaps = 1/98 (1%)
Frame = +1
Query: 112 GSPRYEMAEQSDKAVKYYTLEEIQKHNNSKSTWLILHHKVYDLTKFLEEHPGGEEVLREQ 291
G + E ++ ++ + EEIQKHN WL++ KVY++TK+ HPGG V+
Sbjct: 32 GGNQGEGTADREEPLQTFCWEEIQKHNLRTDKWLVIDRKVYNITKWSSRHPGGHRVIGHY 91
Query: 292 AGGDATENFEDVGHSTD-ARELSKTFIIGELHPDDRSK 402
AG DAT+ F D R+ K +IGEL P++ S+
Sbjct: 92 AGEDATDAFHAFHRDLDFVRKFMKPLLIGELAPEEPSQ 129
>ref|XP_540914.2| PREDICTED: similar to fatty acid desaturase 1 isoform 1 [Canis
familiaris].
Length = 442
Score = 62.0 bits (149), Expect = 1e-09
Identities = 32/87 (36%), Positives = 50/87 (57%), Gaps = 4/87 (4%)
Frame = +1
Query: 151 AVKYYTLEEIQKHNNSKST-WLILHHKVYDLTKFLEEHPGGEEVLREQAGGDATENFEDV 327
A +Y+T +E+ K + S+ WL++ KVYD+++F HPGG V+ AG DAT+ F +
Sbjct: 13 AKRYFTWDEVAKRSGSEEERWLVIERKVYDISEFTHRHPGGSRVINHYAGQDATDPF--M 70
Query: 328 GHSTD---ARELSKTFIIGELHPDDRS 399
D R+ + +IGEL P+ S
Sbjct: 71 AFHIDKGLVRKYMNSLLIGELSPEQPS 97
>ref|XP_867837.1| PREDICTED: similar to fatty acid desaturase 1 isoform 2 [Canis
familiaris].
Length = 425
Score = 62.0 bits (149), Expect = 1e-09
Identities = 32/87 (36%), Positives = 50/87 (57%), Gaps = 4/87 (4%)
Frame = +1
Query: 151 AVKYYTLEEIQKHNNSKST-WLILHHKVYDLTKFLEEHPGGEEVLREQAGGDATENFEDV 327
A +Y+T +E+ K + S+ WL++ KVYD+++F HPGG V+ AG DAT+ F +
Sbjct: 13 AKRYFTWDEVAKRSGSEEERWLVIERKVYDISEFTHRHPGGSRVINHYAGQDATDPF--M 70
Query: 328 GHSTD---ARELSKTFIIGELHPDDRS 399
D R+ + +IGEL P+ S
Sbjct: 71 AFHIDKGLVRKYMNSLLIGELSPEQPS 97
>ref|XP_853014.1| PREDICTED: similar to fatty acid 2-hydroxylase [Canis familiaris].
Length = 372
Score = 57.8 bits (138), Expect = 2e-08
Identities = 29/93 (31%), Positives = 53/93 (56%), Gaps = 2/93 (2%)
Frame = +1
Query: 175 EIQKHNNSKSTWLILHHKVYDLTKFLEEHPGGEEVLREQAGGDATENFEDV--GHSTDAR 348
E+Q+ + + W+ ++YDLT FL HPGGE++LR +AG D + + + HS +AR
Sbjct: 15 EVQRRLAAGACWVRCGARLYDLTGFLRHHPGGEQLLRARAGQDVSADLDGPPHRHSANAR 74
Query: 349 ELSKTFIIGELHPDDRSKIAKPSETLITTVESN 447
+ + +G+L D + + + T + T +S+
Sbjct: 75 LWLEQYYVGDLQGDPQGSVENGTVTSVNTRKSD 107
>ref|XP_532219.2| PREDICTED: similar to NADPH cytochrome B5 oxidoreductase [Canis
familiaris].
Length = 485
Score = 56.2 bits (134), Expect = 6e-08
Identities = 23/72 (31%), Positives = 41/72 (56%)
Frame = +1
Query: 166 TLEEIQKHNNSKSTWLILHHKVYDLTKFLEEHPGGEEVLREQAGGDATENFEDVGHSTDA 345
T EE+++HN W+ + VY+++ ++E HPGGE+ L AG D T+ F+ V +
Sbjct: 24 TEEELKRHNTKDDCWICIRGFVYNVSPYMEYHPGGEDELMRAAGSDGTDLFDQVHRWVNY 83
Query: 346 RELSKTFIIGEL 381
+ K ++G +
Sbjct: 84 ESMLKECLVGRM 95
>ref|XP_533270.2| PREDICTED: similar to fatty acid desaturase 3 [Canis familiaris].
Length = 480
Score = 50.8 bits (120), Expect = 3e-06
Identities = 22/73 (30%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Frame = +1
Query: 187 HNNSKSTWLILHHKVYDLTKFLEEHPGGEEVLREQAGGDATENFEDVGHSTD-ARELSKT 363
HN WL++ +VYD++++ + HPGG ++ DAT+ F + R+ +
Sbjct: 66 HNLPGDKWLVIERRVYDISRWTQRHPGGSRLIGHHGAEDATDAFRAFHQDLNFVRKFLQP 125
Query: 364 FIIGELHPDDRSK 402
+IGEL P++ S+
Sbjct: 126 LLIGELAPEEPSQ 138
>ref|XP_538224.2| PREDICTED: similar to Sulfite oxidase, mitochondrial precursor
[Canis familiaris].
Length = 690
Score = 50.8 bits (120), Expect = 3e-06
Identities = 28/81 (34%), Positives = 47/81 (58%), Gaps = 3/81 (3%)
Frame = +1
Query: 163 YTLEEIQKHNNSKST-WLILHHKVYDLTKFLEEHPGGEEVLREQAGGDATENFE--DVGH 333
YT EE++ H++ ++ W+ L +V+D+T+F++ HPGG L AGG + V +
Sbjct: 230 YTREEVRAHSSPETRIWVTLGCEVFDVTEFVDLHPGGPSKLMLAAGGPLEPFWALYAVHN 289
Query: 334 STDARELSKTFIIGELHPDDR 396
REL + +GEL P+D+
Sbjct: 290 QPHVRELLAQYKVGELSPEDK 310
Database: RefSeq49_CP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,874,504
Number of sequences in database: 33,336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33336
Number of Hits to DB: 45,200,996
Number of extensions: 1083272
Number of successful extensions: 2982
Number of sequences better than 1.0e-05: 10
Number of HSP's gapped: 2977
Number of HSP's successfully gapped: 10
Length of query: 410
Length of database: 18,874,504
Length adjustment: 105
Effective length of query: 305
Effective length of database: 15,374,224
Effective search space: 4689138320
Effective search space used: 4689138320
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to RefSeqSP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-012863
(1231 letters)
Database: RefSeq49_SP.fasta
24,897 sequences; 11,343,932 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001001770.1| cytochrome b5 [Sus scrofa]. 277 1e-74
Alignment gi|NP_001153064.1| cytochrome b5 type B [Sus scrofa]. 139 2e-33
Alignment gi|NP_001165221.1| fatty acid desaturase 2 [Sus scrofa]. 71 1e-12
Alignment gi|NP_001106512.1| fatty acid desaturase 1 [Sus scrofa]. 62 9e-10
Alignment gi|XP_003353294.1| PREDICTED: cytochrome b5 reductase 4-like [S... 59 7e-09
Alignment gi|XP_003126916.2| PREDICTED: fatty acid 2-hydroxylase [Sus scr... 55 6e-08
Alignment gi|NP_001193363.1| fatty acid desaturase 3 [Sus scrofa]. 55 8e-08
>ref|NP_001001770.1| cytochrome b5 [Sus scrofa].
Length = 134
Score = 277 bits (708), Expect = 1e-74
Identities = 134/134 (100%), Positives = 134/134 (100%)
Frame = +1
Query: 130 MAEQSDKAVKYYTLEEIQKHNNSKSTWLILHHKVYDLTKFLEEHPGGEEVLREQAGGDAT 309
MAEQSDKAVKYYTLEEIQKHNNSKSTWLILHHKVYDLTKFLEEHPGGEEVLREQAGGDAT
Sbjct: 1 MAEQSDKAVKYYTLEEIQKHNNSKSTWLILHHKVYDLTKFLEEHPGGEEVLREQAGGDAT 60
Query: 310 ENFEDVGHSTDARELSKTFIIGELHPDDRSKIAKPSETLITTVESNSSWWTNWVIPAISA 489
ENFEDVGHSTDARELSKTFIIGELHPDDRSKIAKPSETLITTVESNSSWWTNWVIPAISA
Sbjct: 61 ENFEDVGHSTDARELSKTFIIGELHPDDRSKIAKPSETLITTVESNSSWWTNWVIPAISA 120
Query: 490 LVVSLMYHFYTSEN 531
LVVSLMYHFYTSEN
Sbjct: 121 LVVSLMYHFYTSEN 134
>ref|NP_001153064.1| cytochrome b5 type B [Sus scrofa].
Length = 144
Score = 139 bits (351), Expect = 2e-33
Identities = 64/134 (47%), Positives = 93/134 (69%), Gaps = 1/134 (0%)
Frame = +1
Query: 145 DKAVKYYTLEEIQKHNNSKSTWLILHHKVYDLTKFLEEHPGGEEVLREQAGGDATENFED 324
+ +V YY LEE+ K N+ K WL++H +VYD+T+F+ EHPGGEEVL EQAG DATE+FED
Sbjct: 15 ETSVTYYRLEEVAKRNSPKELWLVIHGRVYDVTRFMNEHPGGEEVLMEQAGRDATESFED 74
Query: 325 VGHSTDARELSKTFIIGELHPDD-RSKIAKPSETLITTVESNSSWWTNWVIPAISALVVS 501
VGHS+DARE+ K + IG++HP+D +S+ K T S+W+ W+ P + A+++
Sbjct: 75 VGHSSDAREMLKQYYIGDVHPNDLKSESGKEPPTSGVC----KSYWSYWIFPILGAILLG 130
Query: 502 LMYHFYTSEN*KHS 543
+Y +YT+ K S
Sbjct: 131 FLYRYYTAAESKSS 144
>ref|NP_001165221.1| fatty acid desaturase 2 [Sus scrofa].
Length = 444
Score = 71.2 bits (173), Expect = 1e-12
Identities = 37/98 (37%), Positives = 55/98 (56%), Gaps = 1/98 (1%)
Frame = +1
Query: 112 GSPRYEMAEQSDKAVKYYTLEEIQKHNNSKSTWLILHHKVYDLTKFLEEHPGGEEVLREQ 291
G + E A + + + ++ EEIQKHN WL++ KVY++TK+ HPGG V+
Sbjct: 4 GGNQGEGATEREAQMPTFSWEEIQKHNLRTDKWLVIDRKVYNVTKWSSRHPGGHRVISHY 63
Query: 292 AGGDATENFEDVGHSTD-ARELSKTFIIGELHPDDRSK 402
AG DAT+ F D R+ K +IGEL P++ S+
Sbjct: 64 AGKDATDAFFAFHRDLDLVRKFMKPLLIGELAPEEPSQ 101
>ref|NP_001106512.1| fatty acid desaturase 1 [Sus scrofa].
Length = 445
Score = 61.6 bits (148), Expect = 9e-10
Identities = 31/83 (37%), Positives = 47/83 (56%), Gaps = 2/83 (2%)
Frame = +1
Query: 157 KYYTLEEI-QKHNNSKSTWLILHHKVYDLTKFLEEHPGGEEVLREQAGGDATENFEDVGH 333
+Y+T +E+ Q+ K WL++ KVY++TKF HPGG V+ AG DAT+ F
Sbjct: 18 RYFTWDEVAQRSGRGKEQWLVIDRKVYNVTKFTRRHPGGSRVISHYAGQDATDPFVAFHI 77
Query: 334 STD-ARELSKTFIIGELHPDDRS 399
+ R+ + +IGEL P+ S
Sbjct: 78 NQGLVRKYMSSLLIGELSPEQPS 100
>ref|XP_003353294.1| PREDICTED: cytochrome b5 reductase 4-like [Sus scrofa].
Length = 294
Score = 58.5 bits (140), Expect = 7e-09
Identities = 25/72 (34%), Positives = 41/72 (56%)
Frame = +1
Query: 166 TLEEIQKHNNSKSTWLILHHKVYDLTKFLEEHPGGEEVLREQAGGDATENFEDVGHSTDA 345
T EE++KHN W+ + VY+++ ++E HPGGEE L AG D T+ F+ V +
Sbjct: 76 TEEELKKHNKKDDCWICIRGFVYNVSPYMEYHPGGEEELMRAAGSDGTDLFDQVHRWVNY 135
Query: 346 RELSKTFIIGEL 381
+ K ++G +
Sbjct: 136 ESMLKECLVGRM 147
>ref|XP_003126916.2| PREDICTED: fatty acid 2-hydroxylase [Sus scrofa].
Length = 372
Score = 55.5 bits (132), Expect = 6e-08
Identities = 26/93 (27%), Positives = 52/93 (55%), Gaps = 2/93 (2%)
Frame = +1
Query: 175 EIQKHNNSKSTWLILHHKVYDLTKFLEEHPGGEEVLREQAGGDATENFEDV--GHSTDAR 348
E+Q+ + + W+ ++YDLT F+ HPGGE++LR +AG D + + + HS +AR
Sbjct: 15 EVQRRLAAGACWVRCGARLYDLTDFVRHHPGGEQLLRARAGQDVSADLDGPPHRHSANAR 74
Query: 349 ELSKTFIIGELHPDDRSKIAKPSETLITTVESN 447
+ + +G+L D + + ++T +++
Sbjct: 75 RWLEQYYVGDLQGDPQGSVENEPVASVSTQKAD 107
>ref|NP_001193363.1| fatty acid desaturase 3 [Sus scrofa].
Length = 443
Score = 55.1 bits (131), Expect = 8e-08
Identities = 25/87 (28%), Positives = 46/87 (52%), Gaps = 1/87 (1%)
Frame = +1
Query: 172 EEIQKHNNSKSTWLILHHKVYDLTKFLEEHPGGEEVLREQAGGDATENFEDVGHSTD-AR 348
E+I+ HN WL++ +VYD++++ + HPGG ++ DAT+ F R
Sbjct: 24 EQIRPHNLPGDKWLVIERRVYDISRWAQRHPGGSRLIGHHGAEDATDAFHAFHQDLSFVR 83
Query: 349 ELSKTFIIGELHPDDRSKIAKPSETLI 429
+ + +IGEL P++ S+ + L+
Sbjct: 84 KFLQPLLIGELAPEEPSQDGPQNAQLV 110
Database: RefSeq49_SP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 11,343,932
Number of sequences in database: 24,897
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 24897
Number of Hits to DB: 27,766,773
Number of extensions: 669796
Number of successful extensions: 1907
Number of sequences better than 1.0e-05: 7
Number of HSP's gapped: 1902
Number of HSP's successfully gapped: 7
Length of query: 410
Length of database: 11,343,932
Length adjustment: 101
Effective length of query: 309
Effective length of database: 8,829,335
Effective search space: 2728264515
Effective search space used: 2728264515
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)
Search to RefSeqMP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-012863
(1231 letters)
Database: RefSeq49_MP.fasta
30,036 sequences; 15,617,559 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_080073.1| cytochrome b5 [Mus musculus]. 251 1e-66
Alignment gi|XP_001473825.1| PREDICTED: cytochrome b5 type B-like [Mus mu... 139 3e-33
Alignment gi|NP_079834.2| cytochrome b5 type B precursor [Mus musculus]. 139 6e-33
Alignment gi|NP_001075133.1| fatty acid desaturase 2-like protein [Mus mu... 67 4e-11
Alignment gi|NP_062673.1| fatty acid desaturase 2 [Mus musculus]. 65 1e-10
Alignment gi|NP_776094.2| sulfite oxidase, mitochondrial precursor [Mus m... 59 8e-09
Alignment gi|NP_666206.1| fatty acid desaturase 1 [Mus musculus]. 59 8e-09
Alignment gi|NP_077157.2| cytochrome b5 reductase 4 [Mus musculus]. 58 1e-08
Alignment gi|NP_068690.3| fatty acid desaturase 3 [Mus musculus]. 55 9e-08
Alignment gi|NP_835187.2| fatty acid 2-hydroxylase [Mus musculus]. 52 1e-06
>ref|NP_080073.1| cytochrome b5 [Mus musculus].
Length = 134
Score = 251 bits (640), Expect = 1e-66
Identities = 120/134 (89%), Positives = 127/134 (94%)
Frame = +1
Query: 130 MAEQSDKAVKYYTLEEIQKHNNSKSTWLILHHKVYDLTKFLEEHPGGEEVLREQAGGDAT 309
MA QSDK VKYYTLEEIQKH +SKSTW+ILHHKVYDLTKFLEEHPGGEEVLREQAGGDAT
Sbjct: 1 MAGQSDKDVKYYTLEEIQKHKDSKSTWVILHHKVYDLTKFLEEHPGGEEVLREQAGGDAT 60
Query: 310 ENFEDVGHSTDARELSKTFIIGELHPDDRSKIAKPSETLITTVESNSSWWTNWVIPAISA 489
ENFEDVGHSTDARELSKT+IIGELHPDDRSKIAKPS+TLITTVESNSSWWTNWVIPAISA
Sbjct: 61 ENFEDVGHSTDARELSKTYIIGELHPDDRSKIAKPSDTLITTVESNSSWWTNWVIPAISA 120
Query: 490 LVVSLMYHFYTSEN 531
L V+LMY Y +E+
Sbjct: 121 LAVALMYRLYMAED 134
>ref|XP_001473825.1| PREDICTED: cytochrome b5 type B-like [Mus musculus].
Length = 146
Score = 139 bits (351), Expect = 3e-33
Identities = 64/137 (46%), Positives = 93/137 (67%), Gaps = 2/137 (1%)
Frame = +1
Query: 127 EMAEQSDKAVKYYTLEEIQKHNNSKSTWLILHHKVYDLTKFLEEHPGGEEVLREQAGGDA 306
E E S+ +V YY LEE+ K N+++ W+++H +VYD+T+FL EHPGGEEVL EQAG DA
Sbjct: 11 EKVEGSEPSVTYYRLEEVAKRNSAEEMWMVIHGRVYDITRFLSEHPGGEEVLLEQAGADA 70
Query: 307 TENFEDVGHSTDARELSKTFIIGELHPDDRSKIAKPSETLITTVESNS--SWWTNWVIPA 480
TE+FEDVGHS DARE+ K + IG++HP D KP ++NS S W W +P
Sbjct: 71 TESFEDVGHSPDAREMLKQYYIGDVHPSD----LKPKGDDKDPSKNNSCQSSWAYWFVPI 126
Query: 481 ISALVVSLMYHFYTSEN 531
+ A+++ +YH + +++
Sbjct: 127 VGAILIGFLYHHFWADS 143
>ref|NP_079834.2| cytochrome b5 type B precursor [Mus musculus].
Length = 146
Score = 139 bits (349), Expect = 6e-33
Identities = 66/134 (49%), Positives = 92/134 (68%), Gaps = 3/134 (2%)
Frame = +1
Query: 127 EMAEQSDKAVKYYTLEEIQKHNNSKSTWLILHHKVYDLTKFLEEHPGGEEVLREQAGGDA 306
E E S+ +V YY LEE+ K N+++ TW+++H +VYD+T+FL EHPGGEEVL EQAG DA
Sbjct: 11 EKVEGSEPSVTYYRLEEVAKRNSAEETWMVIHGRVYDITRFLSEHPGGEEVLLEQAGADA 70
Query: 307 TENFEDVGHSTDARELSKTFIIGELHPDDRSKIAKPSETLITTVESNS--SWWTNWVIPA 480
TE+FEDVGHS DARE+ K + IG++HP D KP ++NS S W W +P
Sbjct: 71 TESFEDVGHSPDAREMLKQYYIGDVHPSD----LKPKGDDKDPSKNNSCQSSWAYWFVPI 126
Query: 481 ISALVVSLMY-HFY 519
+ A+++ +Y HF+
Sbjct: 127 VGAILIGFLYRHFW 140
>ref|NP_001075133.1| fatty acid desaturase 2-like protein [Mus musculus].
Length = 487
Score = 66.6 bits (161), Expect = 4e-11
Identities = 34/95 (35%), Positives = 53/95 (55%), Gaps = 1/95 (1%)
Frame = +1
Query: 148 KAVKYYTLEEIQKHNNSKSTWLILHHKVYDLTKFLEEHPGGEEVLREQAGGDATENFEDV 327
K + YT +EIQ+H+ WL++ KVY++T + +HPGG VL AG DAT+ F +
Sbjct: 60 KCLNLYTWQEIQRHSQEADQWLVIDRKVYNVTDWAGKHPGGRRVLNHYAGQDATDAFRAM 119
Query: 328 GHSTDAREL-SKTFIIGELHPDDRSKIAKPSETLI 429
+L K +IGEL P++ S+ + L+
Sbjct: 120 HLDLGMVKLYLKPLLIGELSPEEPSQEKNKNAQLV 154
>ref|NP_062673.1| fatty acid desaturase 2 [Mus musculus].
Length = 444
Score = 65.1 bits (157), Expect = 1e-10
Identities = 40/126 (31%), Positives = 62/126 (49%), Gaps = 8/126 (6%)
Frame = +1
Query: 112 GSPRYEMAEQSDKAVKYYTLEEIQKHNNSKSTWLILHHKVYDLTKFLEEHPGGEEVLREQ 291
G + E + + + + EEIQKHN WL++ KVY++TK+ + HPGG V+
Sbjct: 4 GGNQGEGSTERQAPMPTFRWEEIQKHNLRTDRWLVIDRKVYNVTKWSQRHPGGHRVIGHY 63
Query: 292 AGGDATENFEDVGHSTD-ARELSKTFIIGELHPDD-------RSKIAKPSETLITTVESN 447
+G DAT+ F D + K +IGEL P++ S+I + L T E
Sbjct: 64 SGEDATDAFRAFHLDLDFVGKFLKPLLIGELAPEEPSLDRGKSSQITEDFRALKKTAEDM 123
Query: 448 SSWWTN 465
+ + TN
Sbjct: 124 NLFKTN 129
>ref|NP_776094.2| sulfite oxidase, mitochondrial precursor [Mus musculus].
Length = 546
Score = 58.9 bits (141), Expect = 8e-09
Identities = 32/87 (36%), Positives = 51/87 (58%), Gaps = 3/87 (3%)
Frame = +1
Query: 142 SDKAVKYYTLEEIQKHNNSKS-TWLILHHKVYDLTKFLEEHPGGEEVLREQAGGDATENF 318
S ++ + Y+ E+++ HNN K+ W+ L +V+D+TKF++ HPGG L AGG +
Sbjct: 79 SQESPRMYSKEDVRSHNNPKTGVWVTLGSEVFDVTKFVDLHPGGPSKLMLAAGGPLEPFW 138
Query: 319 E--DVGHSTDARELSKTFIIGELHPDD 393
V + REL + IGEL+P+D
Sbjct: 139 ALYAVHNQPHVRELLAEYKIGELNPED 165
>ref|NP_666206.1| fatty acid desaturase 1 [Mus musculus].
Length = 447
Score = 58.9 bits (141), Expect = 8e-09
Identities = 30/86 (34%), Positives = 47/86 (54%), Gaps = 2/86 (2%)
Frame = +1
Query: 148 KAVKYYTLEEI-QKHNNSKSTWLILHHKVYDLTKFLEEHPGGEEVLREQAGGDATENFED 324
+ +Y+T EE+ Q+ K WL++ KVY+++ F HPGG V+ AG DAT+ F
Sbjct: 17 RQTRYFTWEEVAQRSGREKERWLVIDRKVYNISDFSRRHPGGSRVISHYAGQDATDPFVA 76
Query: 325 VGHSTD-ARELSKTFIIGELHPDDRS 399
+ R+ + +IGEL P+ S
Sbjct: 77 FHINKGLVRKYMNSLLIGELAPEQPS 102
>ref|NP_077157.2| cytochrome b5 reductase 4 [Mus musculus].
Length = 528
Score = 58.2 bits (139), Expect = 1e-08
Identities = 24/72 (33%), Positives = 42/72 (58%)
Frame = +1
Query: 166 TLEEIQKHNNSKSTWLILHHKVYDLTKFLEEHPGGEEVLREQAGGDATENFEDVGHSTDA 345
T EE++KHN + W+ + VY+++ ++E HPGGE+ L AG D T+ F +V +
Sbjct: 58 TEEELKKHNKKEDCWICIRGFVYNVSPYMEYHPGGEDELMRAAGADGTDLFNEVHRWVNY 117
Query: 346 RELSKTFIIGEL 381
+ K ++G +
Sbjct: 118 ESMLKECLVGRM 129
>ref|NP_068690.3| fatty acid desaturase 3 [Mus musculus].
Length = 449
Score = 55.5 bits (132), Expect = 9e-08
Identities = 26/87 (29%), Positives = 47/87 (54%), Gaps = 1/87 (1%)
Frame = +1
Query: 172 EEIQKHNNSKSTWLILHHKVYDLTKFLEEHPGGEEVLREQAGGDATENFEDVGHSTD-AR 348
E+I++H+ WL++ +VYD++++ + HPGG ++ DAT+ F R
Sbjct: 30 EQIRQHDLPGDKWLVIERRVYDISRWAQRHPGGSRLIGHHGAEDATDAFHAFHQDLHFVR 89
Query: 349 ELSKTFIIGELHPDDRSKIAKPSETLI 429
+ K +IGEL P++ S+ + LI
Sbjct: 90 KFLKPLLIGELAPEEPSQDGAQNAQLI 116
>ref|NP_835187.2| fatty acid 2-hydroxylase [Mus musculus].
Length = 372
Score = 52.0 bits (123), Expect = 1e-06
Identities = 26/78 (33%), Positives = 44/78 (56%), Gaps = 2/78 (2%)
Frame = +1
Query: 163 YTLEEIQKHNNSKSTWLILHHKVYDLTKFLEEHPGGEEVLREQAGGDATENFEDV--GHS 336
+T E+Q+ + + W+ +YDLT F+ HPGGE++L +AG D + + + HS
Sbjct: 11 FTPAEVQRRLAAGACWVRRGASLYDLTSFVRHHPGGEQLLLARAGQDISADLDGPPHRHS 70
Query: 337 TDARELSKTFIIGELHPD 390
+AR + + +GEL D
Sbjct: 71 DNARRWLEQYYVGELRAD 88
Database: RefSeq49_MP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 15,617,559
Number of sequences in database: 30,036
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 30036
Number of Hits to DB: 37,991,525
Number of extensions: 920415
Number of successful extensions: 2639
Number of sequences better than 1.0e-05: 10
Number of HSP's gapped: 2630
Number of HSP's successfully gapped: 10
Length of query: 410
Length of database: 15,617,559
Length adjustment: 104
Effective length of query: 306
Effective length of database: 12,493,815
Effective search space: 3823107390
Effective search space used: 3823107390
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to RefSeqHP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-012863
(1231 letters)
Database: RefSeq49_HP.fasta
32,964 sequences; 18,297,164 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_683725.1| cytochrome b5 isoform 1 [Homo sapiens]. 248 1e-65
Alignment gi|NP_001177736.1| cytochrome b5 isoform 3 [Homo sapiens]. 227 1e-59
Alignment gi|NP_001905.1| cytochrome b5 isoform 2 [Homo sapiens]. 189 3e-48
Alignment gi|NP_085056.2| cytochrome b5 type B precursor [Homo sapiens]. 141 1e-33
Alignment gi|NP_004256.1| fatty acid desaturase 2 [Homo sapiens]. 72 1e-12
Alignment gi|NP_037534.3| fatty acid desaturase 1 [Homo sapiens]. 59 1e-08
Alignment gi|NP_057314.2| cytochrome b5 reductase 4 [Homo sapiens]. 59 1e-08
Alignment gi|NP_001027559.1| sulfite oxidase, mitochondrial precursor [Ho... 55 2e-07
Alignment gi|NP_001027558.1| sulfite oxidase, mitochondrial precursor [Ho... 55 2e-07
Alignment gi|NP_000447.2| sulfite oxidase, mitochondrial precursor [Homo ... 55 2e-07
>ref|NP_683725.1| cytochrome b5 isoform 1 [Homo sapiens].
Length = 134
Score = 248 bits (632), Expect = 1e-65
Identities = 116/134 (86%), Positives = 127/134 (94%)
Frame = +1
Query: 130 MAEQSDKAVKYYTLEEIQKHNNSKSTWLILHHKVYDLTKFLEEHPGGEEVLREQAGGDAT 309
MAEQSD+AVKYYTLEEIQKHN+SKSTWLILHHKVYDLTKFLEEHPGGEEVLREQAGGDAT
Sbjct: 1 MAEQSDEAVKYYTLEEIQKHNHSKSTWLILHHKVYDLTKFLEEHPGGEEVLREQAGGDAT 60
Query: 310 ENFEDVGHSTDARELSKTFIIGELHPDDRSKIAKPSETLITTVESNSSWWTNWVIPAISA 489
ENFEDVGHSTDARE+SKTFIIGELHPDDR K+ KP ETLITT++S+SSWWTNWVIPAISA
Sbjct: 61 ENFEDVGHSTDAREMSKTFIIGELHPDDRPKLNKPPETLITTIDSSSSWWTNWVIPAISA 120
Query: 490 LVVSLMYHFYTSEN 531
+ V+LMY Y +E+
Sbjct: 121 VAVALMYRLYMAED 134
>ref|NP_001177736.1| cytochrome b5 isoform 3 [Homo sapiens].
Length = 124
Score = 227 bits (579), Expect = 1e-59
Identities = 110/134 (82%), Positives = 120/134 (89%)
Frame = +1
Query: 130 MAEQSDKAVKYYTLEEIQKHNNSKSTWLILHHKVYDLTKFLEEHPGGEEVLREQAGGDAT 309
MAEQSD+AVKYYTLEEIQKHN+SKSTWLILHHKVYDLTKFLEEHPGGEEVLREQAGGDAT
Sbjct: 1 MAEQSDEAVKYYTLEEIQKHNHSKSTWLILHHKVYDLTKFLEEHPGGEEVLREQAGGDAT 60
Query: 310 ENFEDVGHSTDARELSKTFIIGELHPDDRSKIAKPSETLITTVESNSSWWTNWVIPAISA 489
ENFEDVGHSTDARE+SKTFIIGELHP ETLITT++S+SSWWTNWVIPAISA
Sbjct: 61 ENFEDVGHSTDAREMSKTFIIGELHP----------ETLITTIDSSSSWWTNWVIPAISA 110
Query: 490 LVVSLMYHFYTSEN 531
+ V+LMY Y +E+
Sbjct: 111 VAVALMYRLYMAED 124
>ref|NP_001905.1| cytochrome b5 isoform 2 [Homo sapiens].
Length = 98
Score = 189 bits (481), Expect = 3e-48
Identities = 90/97 (92%), Positives = 94/97 (96%)
Frame = +1
Query: 130 MAEQSDKAVKYYTLEEIQKHNNSKSTWLILHHKVYDLTKFLEEHPGGEEVLREQAGGDAT 309
MAEQSD+AVKYYTLEEIQKHN+SKSTWLILHHKVYDLTKFLEEHPGGEEVLREQAGGDAT
Sbjct: 1 MAEQSDEAVKYYTLEEIQKHNHSKSTWLILHHKVYDLTKFLEEHPGGEEVLREQAGGDAT 60
Query: 310 ENFEDVGHSTDARELSKTFIIGELHPDDRSKIAKPSE 420
ENFEDVGHSTDARE+SKTFIIGELHPDDR K+ KP E
Sbjct: 61 ENFEDVGHSTDAREMSKTFIIGELHPDDRPKLNKPPE 97
>ref|NP_085056.2| cytochrome b5 type B precursor [Homo sapiens].
Length = 150
Score = 141 bits (356), Expect = 1e-33
Identities = 68/152 (44%), Positives = 101/152 (66%), Gaps = 3/152 (1%)
Frame = +1
Query: 85 ISAAVSRA*GSPRYEMAEQSDKAVKYYTLEEIQKHNNSKSTWLILHHKVYDLTKFLEEHP 264
+S +++ A S ++ + +V YY LEE+ K N+ K WL++H +VYD+T+FL EHP
Sbjct: 1 MSGSMATAEASGSDGKGQEVETSVTYYRLEEVAKRNSLKELWLVIHGRVYDVTRFLNEHP 60
Query: 265 GGEEVLREQAGGDATENFEDVGHSTDARELSKTFIIGELHPDD---RSKIAKPSETLITT 435
GGEEVL EQAG DA+E+FEDVGHS+DARE+ K + IG++HP D S PS+
Sbjct: 61 GGEEVLLEQAGVDASESFEDVGHSSDAREMLKQYYIGDIHPSDLKPESGSKDPSKN---- 116
Query: 436 VESNSSWWTNWVIPAISALVVSLMYHFYTSEN 531
++ S W W++P I A+++ +Y +YTSE+
Sbjct: 117 -DTCKSCWAYWILPIIGAVLLGFLYRYYTSES 147
>ref|NP_004256.1| fatty acid desaturase 2 [Homo sapiens].
Length = 444
Score = 72.0 bits (175), Expect = 1e-12
Identities = 44/128 (34%), Positives = 67/128 (52%), Gaps = 8/128 (6%)
Frame = +1
Query: 112 GSPRYEMAEQSDKAVKYYTLEEIQKHNNSKSTWLILHHKVYDLTKFLEEHPGGEEVLREQ 291
G + E A + + +V ++ EEIQKHN WL++ KVY++TK+ +HPGG+ V+
Sbjct: 4 GGNQGEGAAEREVSVPTFSWEEIQKHNLRTDRWLVIDRKVYNITKWSIQHPGGQRVIGHY 63
Query: 292 AGGDATENFEDVGHSTD-ARELSKTFIIGELHPDD-------RSKIAKPSETLITTVESN 447
AG DAT+ F + + K +IGEL P++ SKI + L T E
Sbjct: 64 AGEDATDAFRAFHPDLEFVGKFLKPLLIGELAPEEPSQDHGKNSKITEDFRALRKTAEDM 123
Query: 448 SSWWTNWV 471
+ + TN V
Sbjct: 124 NLFKTNHV 131
>ref|NP_037534.3| fatty acid desaturase 1 [Homo sapiens].
Length = 501
Score = 58.5 bits (140), Expect = 1e-08
Identities = 26/82 (31%), Positives = 47/82 (57%), Gaps = 1/82 (1%)
Frame = +1
Query: 157 KYYTLEEIQKHNNSKSTWLILHHKVYDLTKFLEEHPGGEEVLREQAGGDATENFEDVGHS 336
+Y+T +E+ + + + WL++ KVY++++F HPGG V+ AG DAT+ F +
Sbjct: 75 RYFTWDEVAQRSGCEERWLVIDRKVYNISEFTRRHPGGSRVISHYAGQDATDPFVAFHIN 134
Query: 337 TD-ARELSKTFIIGELHPDDRS 399
++ + +IGEL P+ S
Sbjct: 135 KGLVKKYMNSLLIGELSPEQPS 156
>ref|NP_057314.2| cytochrome b5 reductase 4 [Homo sapiens].
Length = 521
Score = 58.5 bits (140), Expect = 1e-08
Identities = 25/72 (34%), Positives = 41/72 (56%)
Frame = +1
Query: 166 TLEEIQKHNNSKSTWLILHHKVYDLTKFLEEHPGGEEVLREQAGGDATENFEDVGHSTDA 345
T EE++KHN W+ + VY+++ ++E HPGGE+ L AG D TE F+ V +
Sbjct: 58 TEEELKKHNKKDDCWICIRGFVYNVSPYMEYHPGGEDELMRAAGSDGTELFDQVHRWVNY 117
Query: 346 RELSKTFIIGEL 381
+ K ++G +
Sbjct: 118 ESMLKECLVGRM 129
>ref|NP_001027559.1| sulfite oxidase, mitochondrial precursor [Homo sapiens].
Length = 545
Score = 54.7 bits (130), Expect = 2e-07
Identities = 33/97 (34%), Positives = 54/97 (55%), Gaps = 3/97 (3%)
Frame = +1
Query: 142 SDKAVKYYTLEEIQKHNNSKS-TWLILHHKVYDLTKFLEEHPGGEEVLREQAGGDATENF 318
+ ++ YT EE+ H + ++ W+ L +V+D+T+F++ HPGG L AGG +
Sbjct: 78 AQESTHIYTKEEVSSHTSPETGIWVTLGSEVFDVTEFVDLHPGGPSKLMLAAGGPLEPFW 137
Query: 319 E--DVGHSTDARELSKTFIIGELHPDDRSKIAKPSET 423
V + + REL + IGEL+P+D K+A ET
Sbjct: 138 ALYAVHNQSHVRELLAQYKIGELNPED--KVAPTVET 172
>ref|NP_001027558.1| sulfite oxidase, mitochondrial precursor [Homo sapiens].
Length = 545
Score = 54.7 bits (130), Expect = 2e-07
Identities = 33/97 (34%), Positives = 54/97 (55%), Gaps = 3/97 (3%)
Frame = +1
Query: 142 SDKAVKYYTLEEIQKHNNSKS-TWLILHHKVYDLTKFLEEHPGGEEVLREQAGGDATENF 318
+ ++ YT EE+ H + ++ W+ L +V+D+T+F++ HPGG L AGG +
Sbjct: 78 AQESTHIYTKEEVSSHTSPETGIWVTLGSEVFDVTEFVDLHPGGPSKLMLAAGGPLEPFW 137
Query: 319 E--DVGHSTDARELSKTFIIGELHPDDRSKIAKPSET 423
V + + REL + IGEL+P+D K+A ET
Sbjct: 138 ALYAVHNQSHVRELLAQYKIGELNPED--KVAPTVET 172
>ref|NP_000447.2| sulfite oxidase, mitochondrial precursor [Homo sapiens].
Length = 545
Score = 54.7 bits (130), Expect = 2e-07
Identities = 33/97 (34%), Positives = 54/97 (55%), Gaps = 3/97 (3%)
Frame = +1
Query: 142 SDKAVKYYTLEEIQKHNNSKS-TWLILHHKVYDLTKFLEEHPGGEEVLREQAGGDATENF 318
+ ++ YT EE+ H + ++ W+ L +V+D+T+F++ HPGG L AGG +
Sbjct: 78 AQESTHIYTKEEVSSHTSPETGIWVTLGSEVFDVTEFVDLHPGGPSKLMLAAGGPLEPFW 137
Query: 319 E--DVGHSTDARELSKTFIIGELHPDDRSKIAKPSET 423
V + + REL + IGEL+P+D K+A ET
Sbjct: 138 ALYAVHNQSHVRELLAQYKIGELNPED--KVAPTVET 172
Database: RefSeq49_HP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,297,164
Number of sequences in database: 32,964
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 32964
Number of Hits to DB: 44,501,789
Number of extensions: 1073562
Number of successful extensions: 2926
Number of sequences better than 1.0e-05: 12
Number of HSP's gapped: 2911
Number of HSP's successfully gapped: 12
Length of query: 410
Length of database: 18,297,164
Length adjustment: 105
Effective length of query: 305
Effective length of database: 14,835,944
Effective search space: 4524962920
Effective search space used: 4524962920
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to Sscrofa10_2
BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-012863
(1231 letters)
Database: Sscrofa_10.2.fasta
4582 sequences; 2,808,509,378 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Sscrofa_Chr01 1479 0.0
Sscrofa_ChrX 228 6e-57
>Sscrofa_Chr01
|| Length = 315321322
Score = 1479 bits (746), Expect = 0.0
Identities = 777/787 (98%), Gaps = 2/787 (0%)
Strand = Plus / Plus
Query: 447 ttccagctggtggaccaactgggtgatcccagccatctcagcactggttgtatccctgat 506
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 165936276 ttccagctggtggaccaactgggtgatcccagccatctcagcactggttgtatccctgat 165936335
Query: 507 gtatcacttctacacatcggaaaactaaaaacattctcagaagccaatggaagaaaagac 566
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 165936336 gtatcacttctacacatcggaaaactaaaaacattctcagaagccaatggaagaaaagac 165936395
Query: 567 tgctctggtccagggagaaagaagctaccattaactgccttgattgacagaatacttcac 626
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 165936396 tgctctggtccagggagaaagaagctaccattaactgccttgattgacagaatacttcac 165936455
Query: 627 tggaaaataatttcagtatacctgtttccttttcctcctgcattagtcataaaacaaatc 686
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 165936456 tggaaaataatttcagtatacctgtttccttttcctcctgcattagtcataaaacaaatc 165936515
Query: 687 aaaaagcactgttctattctttctactcctcaacttttagagtgtgcctttttattcatc 746
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 165936516 aaaaagcactgttctattctttctactcctcaacttttagagtgtgcctttttattcatc 165936575
Query: 747 agctttgttttgatgttccatcactacatcatttgcttagtgtgggcacaatcttttaaa 806
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 165936576 agctttgttttgatgttccatcactacatcatttgcttagtgtgggcacaatcttttaaa 165936635
Query: 807 acctatcacatttgcctgtctctttggtgtataattgtctgtaacgtttgaaatctgatt 866
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 165936636 acctatcacatttgcctgtctctttggtgtataattgtctgtaacgtttgaaatctgatt 165936695
Query: 867 atttggcagtcatttaatatgctgatcactcagacctgcgttgtctgtctcgtgcgagga 926
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 165936696 atttggcagtcatttaatatgctgatcactcagacctgcgttgtctgtctcgtgcgagga 165936755
Query: 927 ggagcatccttgagtctcttactctgctgtttcatctaattgaataatcaggtactacat 986
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 165936756 ggagcatccttgagtctcttactctgctgtttcatctaattgaataatcaggtactacat 165936815
Query: 987 gtttccaatgtagtttttccccccaagggaaatatgaaaagcccagaaataatagcttaa 1046
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 165936816 gtttccaatgtagtttttccccccaagggaaatatgaaaagcccagaaataatagcttaa 165936875
Query: 1047 agatttctaatagttgttctacttgaaaagttgaatagatgataaaaaggaaaaatgccc 1106
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 165936876 agatttctaatagttgttctacttgaaaagttgaatagatgataaaaaggaaaaatgccc 165936935
Query: 1107 tataggacagag-aaagagactccatctctttgattnnnnnnncactagcaacatccaca 1165
|||||||||||| ||||||||||||||||||||||| ||||||||||||| |||
Sbjct: 165936936 tataggacagagaaaagagactccatctctttgattaaaaaaacactagcaacatcaaca 165936995
Query: 1166 aaagcctgtgaaccatgagagaacattaccactgtcccttctctcagc-taaaagatgtc 1224
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 165936996 aaagcctgtgaaccatgagagaacattaccactgtcccttctctcagcttaaaagatgtc 165937055
Query: 1225 attccaa 1231
|||||||
Sbjct: 165937056 attccaa 165937062
Score = 511 bits (258), Expect = e-142
Identities = 258/258 (100%)
Strand = Plus / Plus
Query: 1 gtctgccgcccggcccagttggggagctgggaccaggggaatgtcccggcccgagttcgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 165902018 gtctgccgcccggcccagttggggagctgggaccaggggaatgtcccggcccgagttcgc 165902077
Query: 61 caggactcccactctgttccgctcatctctgccgctgtcagcagggcctgaggttcgccg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 165902078 caggactcccactctgttccgctcatctctgccgctgtcagcagggcctgaggttcgccg 165902137
Query: 121 cgttacgaaatggccgaacagtccgacaaagccgtgaagtattacaccctggaagagatc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 165902138 cgttacgaaatggccgaacagtccgacaaagccgtgaagtattacaccctggaagagatc 165902197
Query: 181 cagaagcacaacaacagcaagagcacctggctaatcctgcaccacaaagtgtacgatttg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 165902198 cagaagcacaacaacagcaagagcacctggctaatcctgcaccacaaagtgtacgatttg 165902257
Query: 241 accaaatttttggaggag 258
||||||||||||||||||
Sbjct: 165902258 accaaatttttggaggag 165902275
Score = 262 bits (132), Expect = 4e-67
Identities = 132/132 (100%)
Strand = Plus / Plus
Query: 257 agcatcctggtggggaagaagtcttaagggaacaagctggaggtgatgctactgaaaatt 316
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 165928006 agcatcctggtggggaagaagtcttaagggaacaagctggaggtgatgctactgaaaatt 165928065
Query: 317 ttgaggatgttggacactccacagatgctcgagagttgtccaaaacgttcatcattgggg 376
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 165928066 ttgaggatgttggacactccacagatgctcgagagttgtccaaaacgttcatcattgggg 165928125
Query: 377 agctgcatccgg 388
||||||||||||
Sbjct: 165928126 agctgcatccgg 165928137
Score = 71.9 bits (36), Expect = 8e-10
Identities = 36/36 (100%)
Strand = Plus / Plus
Query: 417 ggaaactcttattaccactgttgaatctaattccag 452
||||||||||||||||||||||||||||||||||||
Sbjct: 165934348 ggaaactcttattaccactgttgaatctaattccag 165934383
Score = 63.9 bits (32), Expect = 2e-07
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 387 ggatgacagatcaaagattgccaagccttcgg 418
||||||||||||||||||||||||||||||||
Sbjct: 165930249 ggatgacagatcaaagattgccaagccttcgg 165930280
>Sscrofa_ChrX
|| Length = 144288218
Score = 228 bits (115), Expect = 6e-57
Identities = 281/334 (84%), Gaps = 8/334 (2%)
Strand = Plus / Plus
Query: 53 gagttcgccaggactcccactctgttccgctcatctctgccgctgtcagcagggcctgag 112
|||||||| | |||||| ||||||||||| ||||| |||||| ||||| |||||
Sbjct: 46438886 gagttcgctaagactcctgctctgttccgcctggctctggtgctgtctacaggggctgag 46438945
Query: 113 gttcgccgcgttacgaaatggccgaacagtccgacaaagccgtgaagtattacaccctgg 172
| | ||||| || | |||||||| | |||||| | |||||| ||||||| || |||||||
Sbjct: 46438946 gcttgccgccttccaaaatggccaagcagtccaataaagccatgaagtactagaccctgg 46439005
Query: 173 aagagatccagaagcacaacaacagcaagagcacctggctaatcctgcaccacaaagtgt 232
|||||||||| ||||||| | ||||||||||||||||||| ||||||||| |||| ||
Sbjct: 46439006 aagagatccaaaagcacagccacagcaagagcacctggctgatcctgcac-acaaggt-- 46439062
Query: 233 acgatttgaccaaatttttggaggagcatcctggtggggaagaagtcttaagggaacaag 292
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 46439063 ----tttgaccaaatttt-ggaggagcatcctggtggggaagaagtcttaagggaacaag 46439117
Query: 293 ctggaggtgatgctactgaaaattttgaggatgttggacactccacagatgctcgagagt 352
|| |||||||||||| ||||| |||||||||| | ||||||||||||||| ||||
Sbjct: 46439118 ctagaggtgatgctatagaaaacgttgaggatgtcaggcactccacagatgcttacgagt 46439177
Query: 353 tgtccaaaacgttcatcattggggagctgcatcc 386
| |||||||| || ||| ||||||||||||||||
Sbjct: 46439178 tatccaaaacatttatctttggggagctgcatcc 46439211
Score = 174 bits (88), Expect = 7e-41
Identities = 115/123 (93%), Gaps = 2/123 (1%)
Strand = Plus / Plus
Query: 681 caaatcaaaaagcactgttctattcttt--ctactcctcaacttttagagtgtgcctttt 738
|||| ||||||||||||||||||| ||| |||||||| ||||||||||||||| |||||
Sbjct: 46439278 caaaccaaaaagcactgttctattttttttctactcctgaacttttagagtgtgtctttt 46439337
Query: 739 tattcatcagctttgttttgatgttccatcactacatcatttgcttagtgtgggcacaat 798
||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||
Sbjct: 46439338 tattcatcagctttgttttgatgttccatcactacgtcatttgcttattgtgggcacaat 46439397
Query: 799 ctt 801
|||
Sbjct: 46439398 ctt 46439400
Score = 71.9 bits (36), Expect = 8e-10
Identities = 145/178 (81%), Gaps = 9/178 (5%)
Strand = Plus / Plus
Query: 1045 aaagatttctaatagttgttctacttgaaaagttgaatagatgataaaaag---gaaaaa 1101
|||||||||||||| |||||||||||||| | ||||||||| || |||||| ||||||
Sbjct: 46440147 aaagatttctaatacttgttctacttgaacaattgaatagaggacaaaaagaaagaaaaa 46440206
Query: 1102 -tgccctataggacagagaaa-gagactccatc---tctttgattnnnnnnncactagca 1156
|| ||| |||||| |||| ||||||||||| ||||||||| ||| ||||
Sbjct: 46440207 gtggcctgtaggacctcgaaaagagactccatcccttctttgattaaaaac-caccagca 46440265
Query: 1157 acatccacaaaagcctgtgaaccatgagagaacattaccactgtcccttctctcagct 1214
||||| ||||||||||||||||| ||||||||||| || | |||| |||| |||||||
Sbjct: 46440266 acatcaacaaaagcctgtgaaccgtgagagaacatcactattgtcacttccctcagct 46440323
Database: Sscrofa_10.2.fasta
Posted date: Nov 16, 2011 10:34 AM
Number of letters in database: 2,808,509,378
Number of sequences in database: 4582
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4582
Number of Hits to DB: 41,675,343
Number of extensions: 335
Number of successful extensions: 335
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 331
Number of HSP's successfully gapped: 10
Length of query: 1231
Length of database: 2,808,509,378
Length adjustment: 21
Effective length of query: 1210
Effective length of database: 2,808,413,156
Effective search space: 3398179918760
Effective search space used: 3398179918760
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 18 (36.2 bits)
S2: 30 (60.0 bits)