Search to RefSeqCP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-012940
(1616 letters)
Database: RefSeq49_CP.fasta
33,336 sequences; 18,874,504 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001182763.1| dipeptidyl peptidase 1 [Canis lupus familiar... 782 0.0
Alignment gi|XP_535784.2| PREDICTED: similar to Dipeptidyl-peptidase I pr... 776 0.0
Alignment gi|XP_538969.2| PREDICTED: similar to tubulointerstitial nephri... 136 7e-32
Alignment gi|XP_536212.2| PREDICTED: similar to Cathepsin H precursor [Ca... 134 3e-31
Alignment gi|XP_543203.2| PREDICTED: similar to cathepsin B preproprotein... 131 2e-30
Alignment gi|XP_533219.2| PREDICTED: similar to Cathepsin F precursor (CA... 121 2e-27
Alignment gi|NP_001029168.1| cathepsin K precursor [Canis lupus familiari... 120 4e-27
Alignment gi|XP_535330.2| PREDICTED: similar to P3ECSL [Canis familiaris]. 119 8e-27
Alignment gi|NP_001002938.1| cathepsin S precursor [Canis lupus familiari... 117 4e-26
Alignment gi|XP_854795.1| PREDICTED: similar to Cathepsin Z precursor (Ca... 115 2e-25
>ref|NP_001182763.1| dipeptidyl peptidase 1 [Canis lupus familiaris].
Length = 459
Score = 782 bits (2020), Expect = 0.0
Identities = 366/439 (83%), Positives = 395/439 (89%)
Frame = +2
Query: 188 DTPANCTYPDLLGTWIFHVGPGGSQRDVNCSVMGPPEKKVVVHLKKLDTAYDDFGNSGRF 367
DTPANCT+P+LLGTW+F VGP GS R VNCSVMGPPEKKVVVHL+KLDTAYD+FGN+G F
Sbjct: 25 DTPANCTHPELLGTWVFQVGPAGS-RSVNCSVMGPPEKKVVVHLEKLDTAYDNFGNTGHF 83
Query: 368 TIIYNQGFEIVLNDYKWFAFFKYKEEGRKVTSYCNETMTGWVHDVLGRNWACFTGEKAGN 547
TIIYNQGFEIVLNDYKWFAFFKYKEEG KVTSYCNETMTGWVHDVLGRNWACFTG K G
Sbjct: 84 TIIYNQGFEIVLNDYKWFAFFKYKEEGHKVTSYCNETMTGWVHDVLGRNWACFTGTKMGT 143
Query: 548 TFEKVNVNTAHLKSRQKKYSNRLYKYNHDFVKAINGIQKSWTATAYMEYETLTLKEMTQR 727
T EK VNT H++ Q+ SNRLYKYN++FVKAIN IQKSWTAT Y+EYETLTL++M R
Sbjct: 144 TSEKAKVNTKHIERLQENNSNRLYKYNYEFVKAINTIQKSWTATRYIEYETLTLRDMMTR 203
Query: 728 GGGYNQRLPRPKPAPITAEIQEKSLHLPASWDWRNVRGTNFVTPVRNQASCGSCYSFASM 907
GG +++PRPKP P+TAEI E+ LP SWDWRNVRGTNFV+PVRNQASCGSCY+FAS
Sbjct: 204 VGG--RKIPRPKPTPLTAEIHEEISRLPTSWDWRNVRGTNFVSPVRNQASCGSCYAFAST 261
Query: 908 GMMEARIRILTNNTQTPILSPQEVVSCSQYAQGCAGGFPYLIAGKYAQDFGLVEEACFPY 1087
M+EARIRILTNNTQTPILSPQE+VSCSQYAQGC GGFPYLIAGKYAQDFGLVEEACFPY
Sbjct: 262 AMLEARIRILTNNTQTPILSPQEIVSCSQYAQGCEGGFPYLIAGKYAQDFGLVEEACFPY 321
Query: 1088 TGTDSPCTVKEGCFRYYSSEYHYVGGFYGGCNEALMKLELVHHGPMAVAFEVYDDFLHYR 1267
G+DSPC + CFRYYSSEY+YVGGFYG CNEALMKLELV HGPMAVAFEVYDDF HY+
Sbjct: 322 AGSDSPCKPND-CFRYYSSEYYYVGGFYGACNEALMKLELVRHGPMAVAFEVYDDFFHYQ 380
Query: 1268 KGIYHHTGLRDPFNPFELTNHAVLLVGYGTDLASGMDYWIVKNSWGTSWGEDGYFRIPRG 1447
KGIY+HTGLRDPFNPFELTNHAVLLVGYGTD ASGMDYWIVKNSWG+ WGEDGYFRI RG
Sbjct: 381 KGIYYHTGLRDPFNPFELTNHAVLLVGYGTDSASGMDYWIVKNSWGSRWGEDGYFRIRRG 440
Query: 1448 TDECAIESIAVAATPIPKL 1504
TDECAIESIAVAATPIPKL
Sbjct: 441 TDECAIESIAVAATPIPKL 459
>ref|XP_535784.2| PREDICTED: similar to Dipeptidyl-peptidase I precursor (DPP-I) (DPPI)
(Cathepsin C) (Cathepsin J) (Dipeptidyl transferase),
partial [Canis familiaris].
Length = 481
Score = 776 bits (2005), Expect = 0.0
Identities = 363/444 (81%), Positives = 395/444 (88%)
Frame = +2
Query: 173 GTAHCDTPANCTYPDLLGTWIFHVGPGGSQRDVNCSVMGPPEKKVVVHLKKLDTAYDDFG 352
G AH DTPANCT+P+LLGTW+F VGP GS R VNC VMGPPEKKVVVHL+KLDTAYD+FG
Sbjct: 42 GAAHHDTPANCTHPELLGTWVFQVGPAGS-RSVNCLVMGPPEKKVVVHLEKLDTAYDNFG 100
Query: 353 NSGRFTIIYNQGFEIVLNDYKWFAFFKYKEEGRKVTSYCNETMTGWVHDVLGRNWACFTG 532
N+G FTIIYNQGFEIVLNDYKWFAFFKYKEEG +VTSYCNETMTGWVHDVLGRNWACFTG
Sbjct: 101 NTGDFTIIYNQGFEIVLNDYKWFAFFKYKEEGHRVTSYCNETMTGWVHDVLGRNWACFTG 160
Query: 533 EKAGNTFEKVNVNTAHLKSRQKKYSNRLYKYNHDFVKAINGIQKSWTATAYMEYETLTLK 712
K G T EK VNT H++ Q+ SNRLYKYN++FVKAIN IQKSWTAT Y+EYETLTL+
Sbjct: 161 TKMGTTSEKAKVNTKHIERLQENNSNRLYKYNYEFVKAINTIQKSWTATRYIEYETLTLR 220
Query: 713 EMTQRGGGYNQRLPRPKPAPITAEIQEKSLHLPASWDWRNVRGTNFVTPVRNQASCGSCY 892
+M +R GG +++PRPKP P+TAEI E+ LP SWDWRNVRGTNFV+PVRNQASCGSCY
Sbjct: 221 DMMRRAGG--RKIPRPKPTPLTAEIHEEISRLPTSWDWRNVRGTNFVSPVRNQASCGSCY 278
Query: 893 SFASMGMMEARIRILTNNTQTPILSPQEVVSCSQYAQGCAGGFPYLIAGKYAQDFGLVEE 1072
+FAS M+EARIRILTNNTQTPILSPQE+VSCSQYAQGC GGFPYLIAGKYAQDFGLV+E
Sbjct: 279 AFASTVMLEARIRILTNNTQTPILSPQEIVSCSQYAQGCEGGFPYLIAGKYAQDFGLVDE 338
Query: 1073 ACFPYTGTDSPCTVKEGCFRYYSSEYHYVGGFYGGCNEALMKLELVHHGPMAVAFEVYDD 1252
ACF Y G+DSPC + CF YYSSEYHYVGGFYG CNEALMKLELV HGPMAVAFEVYDD
Sbjct: 339 ACFSYAGSDSPCKPND-CFHYYSSEYHYVGGFYGACNEALMKLELVRHGPMAVAFEVYDD 397
Query: 1253 FLHYRKGIYHHTGLRDPFNPFELTNHAVLLVGYGTDLASGMDYWIVKNSWGTSWGEDGYF 1432
F HY+KGIY+HTGLRDP NPFELTNHAVLLVGYGTD ASGMDYWIVKNSWG+ WGEDGYF
Sbjct: 398 FFHYQKGIYYHTGLRDPINPFELTNHAVLLVGYGTDSASGMDYWIVKNSWGSRWGEDGYF 457
Query: 1433 RIPRGTDECAIESIAVAATPIPKL 1504
+I RGTDECAIESIAVAATPIPKL
Sbjct: 458 QICRGTDECAIESIAVAATPIPKL 481
>ref|XP_538969.2| PREDICTED: similar to tubulointerstitial nephritis antigen [Canis
familiaris].
Length = 476
Score = 136 bits (342), Expect = 7e-32
Identities = 100/340 (29%), Positives = 162/340 (47%), Gaps = 30/340 (8%)
Frame = +2
Query: 557 KVNVNTAHLKSRQKKYSNRLYKYNHDFVKAINGIQKSWTATAYMEYETLTLKEMTQRGGG 736
K N N+ +Q K S + + ++ +N WTA Y ++ +TL+E G
Sbjct: 134 KENCNSCTCSGQQWKCSQLVCLVQPELIEHVNKGDYGWTAQNYSQFWGMTLEE------G 187
Query: 737 YNQRLPRPKPAPITAEIQEKSLHLPASWDWRNVRGTNFVTP-----VRNQASCGSCYSFA 901
+ RL P+P+ + E + LPA+ D ++ P +Q +C + ++F+
Sbjct: 188 FKYRLGTLPPSPMLLSMNEMTASLPATTDLPEFFIASYKWPGWTHGPLDQKNCAASWAFS 247
Query: 902 SMGMMEARIRILTNNTQTPILSPQEVVSC-SQYAQGCAGGFPYLIAGKYAQDFGLVEEAC 1078
+ + RI I +N T LSPQ ++SC ++ GC G A + + GLV AC
Sbjct: 248 TASVAADRIAIQSNGRYTANLSPQNLISCCAKNRHGCNSG-SIDRAWWFLRKRGLVSHAC 306
Query: 1079 FPY----TGTDSPCTV---KEGCFRYYSSE------------YHYVGGFYGGCNEALMKL 1201
+P T+ C + +G + ++++ Y + NE +
Sbjct: 307 YPLFKDQNATNYGCAMASRSDGRGKRHATKPCPNNIEKSNRIYQCSPPYRVSSNETEIMK 366
Query: 1202 ELVHHGPMAVAFEVYDDFLHYRKGIYHH-TGLRDPFNPFE-LTNHAVLLVGYGT-DLASG 1372
E++ +GP+ +V++DF HY+ GIY H T + ++ L HAV L G+GT A G
Sbjct: 367 EIMQNGPVQAIMQVHEDFFHYKTGIYRHITRTNEESRKYQKLQTHAVKLTGWGTLKGAQG 426
Query: 1373 MD--YWIVKNSWGTSWGEDGYFRIPRGTDECAIESIAVAA 1486
+WI NSWG SWGE+GYFRI RG +E IE + +AA
Sbjct: 427 QKEKFWIAANSWGISWGENGYFRILRGVNESDIEKLIIAA 466
>ref|XP_536212.2| PREDICTED: similar to Cathepsin H precursor [Canis familiaris].
Length = 304
Score = 134 bits (337), Expect = 3e-31
Identities = 88/234 (37%), Positives = 127/234 (54%), Gaps = 4/234 (1%)
Frame = +2
Query: 809 PASWDWRNVRGTNFVTPVRNQASCGSCYSFASMGMMEARIRILTNNTQTPILSPQEVVSC 988
P DWR + FV+PV+NQ SCGSC++F++ G +E+ I I + + L+ Q++V C
Sbjct: 85 PPFVDWR--KKGKFVSPVKNQGSCGSCWTFSTTGALESAIAIKSGKLLS--LAEQQLVDC 140
Query: 989 SQYAQ--GCAGGFPYLIAGKYAQ-DFGLVEEACFPYTGTDSPCTVKEGCFRYYSSEYHYV 1159
+Q GC G L A +Y + + G++ E +PY G D C + + + +
Sbjct: 141 AQNFNNHGCQGYGAPLQAFEYIRYNKGIMGEDSYPYKGQDGDCKYQPSKAIAFVKDVANI 200
Query: 1160 GGFYGGCNEALMKLELVH-HGPMAVAFEVYDDFLHYRKGIYHHTGLRDPFNPFELTNHAV 1336
N+ +E V + P++ AFEV DF+ YRKGIY T P + NHAV
Sbjct: 201 T-----INDEQAMVEAVALYNPVSFAFEVTSDFMMYRKGIYSSTSCHK--TP-DKVNHAV 252
Query: 1337 LLVGYGTDLASGMDYWIVKNSWGTSWGEDGYFRIPRGTDECAIESIAVAATPIP 1498
L VGYG +G+ YWIVKNSWG WG +GYF + RG + C + A A+ PIP
Sbjct: 253 LAVGYGEQ--NGIPYWIVKNSWGPQWGMNGYFLMERGKNMCGL--AACASYPIP 302
>ref|XP_543203.2| PREDICTED: similar to cathepsin B preproprotein [Canis familiaris].
Length = 420
Score = 131 bits (329), Expect = 2e-30
Identities = 91/265 (34%), Positives = 128/265 (48%), Gaps = 32/265 (12%)
Frame = +2
Query: 794 KSLHLPASWDWRNV-RGTNFVTPVRNQASCGSCYSFASMGMMEARIRILTNNTQTPILSP 970
K+L LP S+D R + +R+Q SCGSC++F ++ + RI I TN +S
Sbjct: 157 KNLILPESFDAREQWPNCPTIKEIRDQGSCGSCWAFGAVEAISDRICIRTNGHVNVEVSA 216
Query: 971 QEVVSC--SQYAQGCAGGFPYLIAGKYAQDFGLVEEA-------CFPYT---------GT 1096
+++++C Q GC GGFP A + GLV C PY+ G+
Sbjct: 217 EDMLTCCGDQCGDGCNGGFP-AEAWNFWTKQGLVSGGLYDSHVGCRPYSIPPCEHHVNGS 275
Query: 1097 DSPCT-----------VKEGCFRYYSSEYHYVGGFYG-GCNEALMKLELVHHGPMAVAFE 1240
PCT + G Y + HY Y NE + E+ +GP+ AF
Sbjct: 276 RPPCTGEGDTPKCSKICEPGYSPSYKEDKHYGCSSYSVSDNEKEIMAEIYKNGPVEAAFT 335
Query: 1241 VYDDFLHYRKGIYHH-TGLRDPFNPFELTNHAVLLVGYGTDLASGMDYWIVKNSWGTSWG 1417
VY DFL Y+ G+Y H TG + HAV ++G+G + G YW+V NSW T WG
Sbjct: 336 VYSDFLLYKSGVYQHVTGEM-------MGGHAVRILGWGVE--DGTPYWLVGNSWNTDWG 386
Query: 1418 EDGYFRIPRGTDECAIESIAVAATP 1492
++G+F+I RG D C IES VA P
Sbjct: 387 DNGFFKILRGRDHCGIESEIVAGIP 411
>ref|XP_533219.2| PREDICTED: similar to Cathepsin F precursor (CATSF) [Canis
familiaris].
Length = 442
Score = 121 bits (304), Expect = 2e-27
Identities = 85/268 (31%), Positives = 127/268 (47%), Gaps = 2/268 (0%)
Frame = +2
Query: 689 EYETLTLKEMTQRGGGYNQRLPRP--KPAPITAEIQEKSLHLPASWDWRNVRGTNFVTPV 862
E+ T+ L + + G RL + AP P WDWR+ VT V
Sbjct: 200 EFRTIYLNPLLRENRGKKMRLAKSISDHAP------------PPEWDWRS---KGAVTKV 244
Query: 863 RNQASCGSCYSFASMGMMEARIRILTNNTQTPILSPQEVVSCSQYAQGCAGGFPYLIAGK 1042
++Q CGSC++F+ G +E + + + LS QE++ C + + C GG P
Sbjct: 245 KDQGMCGSCWAFSVTGNVEGQWFLKEGTLLS--LSEQELLDCDKVDKACLGGLPSNAYSA 302
Query: 1043 YAQDFGLVEEACFPYTGTDSPCTVKEGCFRYYSSEYHYVGGFYGGCNEALMKLELVHHGP 1222
GL E + Y G C+ R Y ++ + NE + L GP
Sbjct: 303 IMTLGGLETEDDYSYQGHLQACSFSAKKARVYINDSMELSQ-----NEQKLAAWLAKKGP 357
Query: 1223 MAVAFEVYDDFLHYRKGIYHHTGLRDPFNPFELTNHAVLLVGYGTDLASGMDYWIVKNSW 1402
++VA + YR GI H LR +P+ L +HAVLLVGYG SG+ +W +KNSW
Sbjct: 358 ISVAINAFG-MQFYRHGISHP--LRPLCSPW-LIDHAVLLVGYGN--RSGIPFWAIKNSW 411
Query: 1403 GTSWGEDGYFRIPRGTDECAIESIAVAA 1486
GT WGE+GY+ + RG+ C + ++A +A
Sbjct: 412 GTDWGEEGYYYLHRGSGACGVNTMASSA 439
>ref|NP_001029168.1| cathepsin K precursor [Canis lupus familiaris].
Length = 330
Score = 120 bits (301), Expect = 4e-27
Identities = 84/265 (31%), Positives = 123/265 (46%), Gaps = 6/265 (2%)
Frame = +2
Query: 701 LTLKEMTQRGGGYNQRLPRPKPAPITAEIQEKSLHLPASWDWRNVRGTNFVTPVRNQASC 880
+T +E+ Q+ G P + T I + P S D+R +VTPV+NQ C
Sbjct: 82 MTSEEVVQKMTGLKVP-PSHSRSNDTLYIPDWESRAPDSVDYRK---KGYVTPVKNQGQC 137
Query: 881 GSCYSFASMGMMEARIRILTNNTQTPILSPQEVVSCSQYAQGCAGGFPYLIAGKYAQDFG 1060
GSC++F+S+G +E +++ T LSPQ +V C GC GG+ ++ G
Sbjct: 138 GSCWAFSSVGALEGQLKKKTGKLLN--LSPQNLVDCVSENDGCGGGYMTNAFQYVQKNRG 195
Query: 1061 LVEEACFPYTGTDSPC----TVKEGCFRYYSSEYHYVGGFYGGCNEALMKLELVHHGPMA 1228
+ E +PY G D C T K R Y NE +K + GP++
Sbjct: 196 IDSEDAYPYVGQDESCMYNPTGKAAKCRGYRE--------IPEGNEKALKRAVARVGPIS 247
Query: 1229 VAFEV-YDDFLHYRKGIYHHTGLRDPFNPFELTNHAVLLVGYGTDLASGMDYWIVKNSWG 1405
VA + F Y KG+Y+ + NHAVL VGYG + G +WI+KNSWG
Sbjct: 248 VAIDASLTSFQFYSKGVYYDENCNS-----DNLNHAVLAVGYG--IQKGNKHWIIKNSWG 300
Query: 1406 TSWGEDGYFRIPRG-TDECAIESIA 1477
+WG GY + R + C I ++A
Sbjct: 301 ENWGNKGYILMARNKNNACGIANLA 325
>ref|XP_535330.2| PREDICTED: similar to P3ECSL [Canis familiaris].
Length = 550
Score = 119 bits (298), Expect = 8e-27
Identities = 92/323 (28%), Positives = 147/323 (45%), Gaps = 38/323 (11%)
Frame = +2
Query: 626 NHDFVKAINGIQKSWTATAYMEYETLTLKEMTQRGGGYNQRLPRPKPAPITAEIQEKSLH 805
+ D + AIN W A + + +TL E G RL +P+ + E +H
Sbjct: 226 DQDMINAINQGNYGWRAGNHSAFWGMTLDE------GIRYRLGTIRPSSSVTNMNE--IH 277
Query: 806 --------LPASWDWRNVRGTNFVTPVRNQASCGSCYSFASMGMMEARIRILTNNTQTPI 961
LP +++ + N + +Q +C ++F++ + R+ I + TP+
Sbjct: 278 TVLRPGEVLPTAFEAAE-KWPNLIHEPLDQGNCAGSWAFSTAAVASDRVSIHSLGHMTPV 336
Query: 962 LSPQEVVSCSQY-AQGCAGGFPYLIAGK--YAQDFGLVEEACFPYTGTDSP-------CT 1111
LSPQ ++SC + QGC GG + G + + G+V + C+P+ G + C
Sbjct: 337 LSPQNLLSCDTHNQQGCRGG---RLDGAWWFLRRRGVVSDHCYPFVGREQDEAGPAPRCM 393
Query: 1112 V---------KEGCFRYYSSEYH------YVGGFYGGCNEALMKLELVHHGPMAVAFEVY 1246
+ ++ R SS H + G NE + EL+ +GP+ EV+
Sbjct: 394 MHSRAMGRGKRQATARCPSSHVHANDIYQVTPAYRLGTNEKEIMKELMENGPVQALMEVH 453
Query: 1247 DDFLHYRKGIYHHT--GLRDPFNPFELTNHAVLLVGYGTD-LASG--MDYWIVKNSWGTS 1411
+DF Y+ GIY HT L P H+V + G+G + L G + YW NSWG +
Sbjct: 454 EDFFLYQGGIYSHTPVSLGRPERYRRHGTHSVKITGWGEETLPDGRTLKYWTAANSWGPA 513
Query: 1412 WGEDGYFRIPRGTDECAIESIAV 1480
WGE G+FRI RG +EC IES +
Sbjct: 514 WGERGHFRIVRGANECDIESFVL 536
>ref|NP_001002938.1| cathepsin S precursor [Canis lupus familiaris].
Length = 331
Score = 117 bits (292), Expect = 4e-26
Identities = 77/227 (33%), Positives = 120/227 (52%), Gaps = 5/227 (2%)
Frame = +2
Query: 806 LPASWDWRNVRGTNFVTPVRNQASCGSCYSFASMGMMEARIRILTNNTQTPILSPQEVVS 985
LP S DWR VT V+ Q SCG+C++F+++G +EA++++ T + LS Q +V
Sbjct: 115 LPDSVDWRE---KGCVTEVKYQGSCGACWAFSAVGALEAQLKLKTGKLVS--LSAQNLVD 169
Query: 986 CS--QYA-QGCAGGFPYLIAGKYAQDFGLVEEACFPYTGTDSPCTVKEGCFRYYSSEYHY 1156
CS +Y +GC GGF + G+ EA +PY + C S+Y
Sbjct: 170 CSTEKYGNKGCNGGFMTTAFQYIIDNNGIDSEASYPYKAMNGKCRYDSKKRAATCSKYTE 229
Query: 1157 VGGFYGGCNEALMKLELVHHGPMAVAFEV-YDDFLHYRKGIYHHTGLRDPFNPFELTNHA 1333
+ +G +E +K + + GP++VA + + F YR G+Y+ + NH
Sbjct: 230 LP--FG--SEDALKEAVANKGPVSVAIDASHYSFFLYRSGVYYEPSCT------QNVNHG 279
Query: 1334 VLLVGYGTDLASGMDYWIVKNSWGTSWGEDGYFRIPRGT-DECAIES 1471
VL+VGYG +G DYW+VKNSWG ++G+ GY R+ R + + C I S
Sbjct: 280 VLVVGYGN--LNGKDYWLVKNSWGLNFGDQGYIRMARNSGNHCGIAS 324
>ref|XP_854795.1| PREDICTED: similar to Cathepsin Z precursor (Cathepsin X) (Cathepsin
P) [Canis familiaris].
Length = 375
Score = 115 bits (287), Expect = 2e-25
Identities = 74/228 (32%), Positives = 106/228 (46%), Gaps = 13/228 (5%)
Frame = +2
Query: 806 LPASWDWRNVRGTNFVTPVRNQ---ASCGSCYSFASMGMMEARIRILTNNT-QTPILSPQ 973
LP SWDWRNV G N+ + RNQ CGSC++ S M RI I + +LS Q
Sbjct: 134 LPKSWDWRNVNGVNYASATRNQHIPQYCGSCWAHGSTSAMADRINIKRKGAWPSTLLSVQ 193
Query: 974 EVVSCSQYAQGCAGGFPYLIAGKYAQDFGLVEEACFPYTGTDSPCTVKEGC-----FRYY 1138
V+ C+ A C GG L YA + G+ +E C Y D C C F+
Sbjct: 194 HVLDCAN-AGSCEGGND-LPVWSYAHEHGIPDETCNNYQAKDQECNKFNQCGTCTEFKEC 251
Query: 1139 SSEYHY----VGGFYGGCNEALMKLELVHHGPMAVAFEVYDDFLHYRKGIYHHTGLRDPF 1306
+ +Y VG + M E+ +GP++ + ++Y GI+ +
Sbjct: 252 HAIQNYTLWRVGDYGSLSGREKMMAEIYANGPISCGIMATEKMVNYTGGIHAE------Y 305
Query: 1307 NPFELTNHAVLLVGYGTDLASGMDYWIVKNSWGTSWGEDGYFRIPRGT 1450
NH + +VG+G ++ G +YWIV+NSWG WGE G+ RI T
Sbjct: 306 QEQAYINHVISVVGWG--VSDGTEYWIVRNSWGEPWGERGWMRIVTST 351
Database: RefSeq49_CP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,874,504
Number of sequences in database: 33,336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33336
Number of Hits to DB: 64,109,939
Number of extensions: 1676656
Number of successful extensions: 5301
Number of sequences better than 1.0e-05: 15
Number of HSP's gapped: 5256
Number of HSP's successfully gapped: 15
Length of query: 538
Length of database: 18,874,504
Length adjustment: 108
Effective length of query: 430
Effective length of database: 15,274,216
Effective search space: 6567912880
Effective search space used: 6567912880
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Animal-Genome cDNA 20110601C-012940
Search to RefSeqBP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-012940
(1616 letters)
Database: RefSeq49_BP.fasta
33,088 sequences; 17,681,374 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001028789.1| dipeptidyl peptidase 1 [Bos taurus]. 851 0.0
Alignment gi|NP_001029557.1| pro-cathepsin H precursor [Bos taurus]. 157 3e-38
Alignment gi|NP_001030279.1| tubulointerstitial nephritis antigen [Bos ta... 127 4e-29
Alignment gi|XP_002685665.1| PREDICTED: tubulointerstitial nephritis anti... 124 3e-28
Alignment gi|XP_887401.3| PREDICTED: tubulointerstitial nephritis antigen... 124 3e-28
Alignment gi|NP_001029607.1| cathepsin K [Bos taurus]. 123 5e-28
Alignment gi|NP_776456.1| cathepsin B precursor [Bos taurus]. 122 7e-28
Alignment gi|NP_001068884.1| cathepsin F [Bos taurus]. 120 3e-27
Alignment gi|NP_001028787.1| cathepsin S precursor [Bos taurus]. 120 5e-27
Alignment gi|NP_001071303.1| cathepsin Z precursor [Bos taurus]. 117 4e-26
>ref|NP_001028789.1| dipeptidyl peptidase 1 [Bos taurus].
Length = 463
Score = 851 bits (2199), Expect = 0.0
Identities = 399/463 (86%), Positives = 416/463 (89%)
Frame = +2
Query: 116 MGPRXXXXXXXXXXXXYVAGTAHCDTPANCTYPDLLGTWIFHVGPGGSQRDVNCSVMGPP 295
MGP Y AG+ DTPANCTYPDLLGTW+F VG GSQRDVNCSVMGPP
Sbjct: 1 MGPWSGSRLVALLLLVYGAGSVRGDTPANCTYPDLLGTWVFQVGSSGSQRDVNCSVMGPP 60
Query: 296 EKKVVVHLKKLDTAYDDFGNSGRFTIIYNQGFEIVLNDYKWFAFFKYKEEGRKVTSYCNE 475
EKKVVVHLKKLDTAYDDFGNSG FTIIYNQGFEIVLNDYKWFAFFKYKEEG KVTSYC+E
Sbjct: 61 EKKVVVHLKKLDTAYDDFGNSGHFTIIYNQGFEIVLNDYKWFAFFKYKEEGGKVTSYCHE 120
Query: 476 TMTGWVHDVLGRNWACFTGEKAGNTFEKVNVNTAHLKSRQKKYSNRLYKYNHDFVKAING 655
TMTGWVHDVLGRN ACFTG K GNT E VNVNTA L ++ YSNRLY+YNHDFVKAIN
Sbjct: 121 TMTGWVHDVLGRNRACFTGRKTGNTSENVNVNTARLAGLEETYSNRLYRYNHDFVKAINA 180
Query: 656 IQKSWTATAYMEYETLTLKEMTQRGGGYNQRLPRPKPAPITAEIQEKSLHLPASWDWRNV 835
IQKSWTA YMEYETLTLKEM +RGGG+++R+PRPKPAPITAEIQ+K LHLP SWDWRNV
Sbjct: 181 IQKSWTAAPYMEYETLTLKEMIRRGGGHSRRIPRPKPAPITAEIQKKILHLPTSWDWRNV 240
Query: 836 RGTNFVTPVRNQASCGSCYSFASMGMMEARIRILTNNTQTPILSPQEVVSCSQYAQGCAG 1015
G NFVTPVRNQ SCGSCYSFASMGMMEARIRILTNNTQTPILSPQEVVSCSQYAQGC G
Sbjct: 241 HGINFVTPVRNQGSCGSCYSFASMGMMEARIRILTNNTQTPILSPQEVVSCSQYAQGCEG 300
Query: 1016 GFPYLIAGKYAQDFGLVEEACFPYTGTDSPCTVKEGCFRYYSSEYHYVGGFYGGCNEALM 1195
GFPYLIAGKYAQDFGLVEE CFPYTGTDSPC +KEGCFRYYSSEYHYVGGFYGGCNEALM
Sbjct: 301 GFPYLIAGKYAQDFGLVEEDCFPYTGTDSPCRLKEGCFRYYSSEYHYVGGFYGGCNEALM 360
Query: 1196 KLELVHHGPMAVAFEVYDDFLHYRKGIYHHTGLRDPFNPFELTNHAVLLVGYGTDLASGM 1375
KLELVH GPMAVAFEVYDDFLHYRKG+YHHTGLRDPFNPFELTNHAVLLVGYGTD ASG+
Sbjct: 361 KLELVHQGPMAVAFEVYDDFLHYRKGVYHHTGLRDPFNPFELTNHAVLLVGYGTDAASGL 420
Query: 1376 DYWIVKNSWGTSWGEDGYFRIPRGTDECAIESIAVAATPIPKL 1504
DYWIVKNSWGTSWGE+GYFRI RGTDECAIESIA+AATPIPKL
Sbjct: 421 DYWIVKNSWGTSWGENGYFRIRRGTDECAIESIALAATPIPKL 463
>ref|NP_001029557.1| pro-cathepsin H precursor [Bos taurus].
Length = 335
Score = 157 bits (397), Expect = 3e-38
Identities = 114/347 (32%), Positives = 169/347 (48%), Gaps = 20/347 (5%)
Frame = +2
Query: 518 ACFTGEKAGNTFEKVNVNTAHLKSRQKKYSNRLYKY------------------NHDFVK 643
AC E A N+ EK + + + QKKYS+ Y + NH F
Sbjct: 19 ACGAAELAANSLEKFHFQS-WMVQHQKKYSSEEYYHRLQAFASNLREINAHNARNHTFKM 77
Query: 644 AINGIQKSWTATAYMEYETLTLKEMTQRGGGYNQRLPRPKPAPITAEIQEKSLHLPASWD 823
+N ++ ++ E+ ++ Y P+ A + ++ + P S D
Sbjct: 78 GLN------------QFSDMSFDELKRK---YLWSEPQNCSATKSNYLRGTGPY-PPSMD 121
Query: 824 WRNVRGTNFVTPVRNQASCGSCYSFASMGMMEARIRILTNNTQTPILSPQEVVSCSQYAQ 1003
WR + NFVTPV+NQ SCGSC++F++ G +E+ + I T + P L+ Q++V C+Q
Sbjct: 122 WR--KKGNFVTPVKNQGSCGSCWTFSTTGALESAVAIATG--KLPFLAEQQLVDCAQNFN 177
Query: 1004 --GCAGGFPYLIAGKYAQDFGLVEEACFPYTGTDSPCTVKEGCFRYYSSEYHYVGGFYGG 1177
GC GG P + G++ E +PY G D C + + + V
Sbjct: 178 NHGCQGGLPSQAFEYIRYNKGIMGEDTYPYRGQDGDCKYQPSKAIAFVKD---VANITLN 234
Query: 1178 CNEALMKLELVHHGPMAVAFEVYDDFLHYRKGIYHHTGLRDPFNPFELTNHAVLLVGYGT 1357
EA+++ +H+ P++ AFEV DF+ YRKGIY T P + NHAVL VGYG
Sbjct: 235 DEEAMVEAVALHN-PVSFAFEVTADFMMYRKGIYSSTSCHK--TP-DKVNHAVLAVGYGE 290
Query: 1358 DLASGMDYWIVKNSWGTSWGEDGYFRIPRGTDECAIESIAVAATPIP 1498
+ G+ YWIVKNSWG +WG GYF I RG + C + A A+ PIP
Sbjct: 291 E--KGIPYWIVKNSWGPNWGMKGYFLIERGKNMCGL--AACASFPIP 333
>ref|NP_001030279.1| tubulointerstitial nephritis antigen [Bos taurus].
Length = 476
Score = 127 bits (318), Expect = 4e-29
Identities = 104/377 (27%), Positives = 170/377 (45%), Gaps = 35/377 (9%)
Frame = +2
Query: 461 SYCNETMTGWVHDVLGRNWACFTGEKAGNTFE-----KVNVNTAHLKSRQKKYSNRLYKY 625
S+C E GW + W+ + G +E K N N+ +Q K S +
Sbjct: 100 SFCREEK-GWPPRT--KPWSPEGCHRDGQHYEEGSVIKENCNSCTCSGQQWKCSQHVCLV 156
Query: 626 NHDFVKAINGIQKSWTATAYMEYETLTLKEMTQRGGGYNQRLPRPKPAPITAEIQEKSLH 805
++ +N WTA Y ++ +TL+E G+ RL P+P+ + E +
Sbjct: 157 QPGLIEHVNKGDYGWTAQNYSQFWGMTLEE------GFKYRLGTLPPSPLLLSMNEVTAS 210
Query: 806 LPASWDWRNVRGTNFVTP-----VRNQASCGSCYSFASMGMMEARIRILTNNTQTPILSP 970
L + D ++ P +Q +C + ++F++ + RI I + T LSP
Sbjct: 211 LTKTTDLPEFFIASYKWPGWTHGPLDQKNCAASWAFSTASVAADRIAIQSQGRYTANLSP 270
Query: 971 QEVVSC-SQYAQGCAGGFPYLIAGKYAQDFGLVEEACFPY----TGTDSPCTV---KEGC 1126
Q ++SC ++ GC G A Y + GLV AC+P T++ C + +G
Sbjct: 271 QNLISCCAKKRHGCNSGSVDR-AWWYLRKRGLVSHACYPLFKDQNATNNGCAMASRSDGR 329
Query: 1127 FRYYSSE------------YHYVGGFYGGCNEALMKLELVHHGPMAVAFEVYDDFLHYRK 1270
+ +++ Y + NE + E++ +GP+ +V++DF +Y+
Sbjct: 330 GKRHATTPCPNSIEKSNRIYQCSPPYRVSSNETEIMREIMQNGPVQAIMQVHEDFFNYKT 389
Query: 1271 GIYHH-TGLRDPFNPF-ELTNHAVLLVGYGTDL-ASGMD--YWIVKNSWGTSWGEDGYFR 1435
GIY H T + + + HAV L G+GT A G +WI NSWG SWGE+GYFR
Sbjct: 390 GIYRHITSTNEDSEKYRKFRTHAVKLTGWGTLRGAQGQKEKFWIAANSWGKSWGENGYFR 449
Query: 1436 IPRGTDECAIESIAVAA 1486
I RG +E IE + +AA
Sbjct: 450 ILRGVNESDIEKLIIAA 466
>ref|XP_002685665.1| PREDICTED: tubulointerstitial nephritis antigen-like 1-like [Bos
taurus].
Length = 534
Score = 124 bits (310), Expect = 3e-28
Identities = 100/370 (27%), Positives = 163/370 (44%), Gaps = 38/370 (10%)
Frame = +2
Query: 485 GWVHDVLGRNWACFTGEKAGNTFEKVNVNTAHLKSRQKKYSNRLYKYNHDFVKAINGIQK 664
G ++ VLG W + N T H K R + + D ++AIN
Sbjct: 176 GRIYPVLGTYW------------DNCNRCTCHEKERWE-CDQEPCLVDEDMIEAINHGDY 222
Query: 665 SWTATAYMEYETLTLKEMTQRGGGYNQRLPRPKPAPITAEIQEKSLH--------LPASW 820
W A + + +TL E G RL +P+ A + E +H LP ++
Sbjct: 223 GWRAGNHSAFWGMTLDE------GIRYRLGTVRPSSFVANMNE--IHTVLGPGEVLPRTF 274
Query: 821 DWRNVRGTNFVTPVRNQASCGSCYSFASMGMMEARIRILTNNTQTPILSPQEVVSCSQY- 997
+ + + N + +Q +C ++F++ + R+ I + +P+LSPQ ++SC +
Sbjct: 275 E-ASEKWPNLIHDPLDQGNCAGSWAFSTAAVASDRVSIHSLGHMSPVLSPQNLLSCDTHN 333
Query: 998 AQGCAGGFPYLIAGK--YAQDFGLVEEACFPYTGTDS-------PCTVKE---------- 1120
QGC GG + G + + G+V + C+P++G PC +
Sbjct: 334 QQGCRGG---RLDGAWWFLRRRGVVSDHCYPFSGHGRDEAVPAPPCMMHSRAMGRGKRQA 390
Query: 1121 -----GCFRYYSSEYHYVGGFYGGCNEALMKLELVHHGPMAVAFEVYDDFLHYRKGIYHH 1285
+ + + Y + G NE + EL+ +GP+ EV++DF Y+ GIY H
Sbjct: 391 TARCPNSYVHANDIYQVTPAYRLGSNEKEIMKELMENGPVQALMEVHEDFFLYQSGIYSH 450
Query: 1286 T--GLRDPFNPFELTNHAVLLVGYGTD-LASG--MDYWIVKNSWGTSWGEDGYFRIPRGT 1450
T L P H+V + G+G + L G + YW NSWG +WGE G+FRI RG
Sbjct: 451 TPVSLGRPERYRRHGTHSVKITGWGEETLPDGRTIKYWTAANSWGPAWGERGHFRIVRGA 510
Query: 1451 DECAIESIAV 1480
+EC IES +
Sbjct: 511 NECDIESFVL 520
>ref|XP_887401.3| PREDICTED: tubulointerstitial nephritis antigen-like 1 isoform 2 [Bos
taurus].
Length = 534
Score = 124 bits (310), Expect = 3e-28
Identities = 100/370 (27%), Positives = 163/370 (44%), Gaps = 38/370 (10%)
Frame = +2
Query: 485 GWVHDVLGRNWACFTGEKAGNTFEKVNVNTAHLKSRQKKYSNRLYKYNHDFVKAINGIQK 664
G ++ VLG W + N T H K R + + D ++AIN
Sbjct: 176 GRIYPVLGTYW------------DNCNRCTCHEKERWE-CDQEPCLVDEDMIEAINHGDY 222
Query: 665 SWTATAYMEYETLTLKEMTQRGGGYNQRLPRPKPAPITAEIQEKSLH--------LPASW 820
W A + + +TL E G RL +P+ A + E +H LP ++
Sbjct: 223 GWRAGNHSAFWGMTLDE------GIRYRLGTVRPSSFVANMNE--IHTVLGPGEVLPRTF 274
Query: 821 DWRNVRGTNFVTPVRNQASCGSCYSFASMGMMEARIRILTNNTQTPILSPQEVVSCSQY- 997
+ + + N + +Q +C ++F++ + R+ I + +P+LSPQ ++SC +
Sbjct: 275 E-ASEKWPNLIHDPLDQGNCAGSWAFSTAAVASDRVSIHSLGHMSPVLSPQNLLSCDTHN 333
Query: 998 AQGCAGGFPYLIAGK--YAQDFGLVEEACFPYTGTDS-------PCTVKE---------- 1120
QGC GG + G + + G+V + C+P++G PC +
Sbjct: 334 QQGCRGG---RLDGAWWFLRRRGVVSDHCYPFSGHGRDEAVPAPPCMMHSRAMGRGKRQA 390
Query: 1121 -----GCFRYYSSEYHYVGGFYGGCNEALMKLELVHHGPMAVAFEVYDDFLHYRKGIYHH 1285
+ + + Y + G NE + EL+ +GP+ EV++DF Y+ GIY H
Sbjct: 391 TARCPNSYVHANDIYQVTPAYRLGSNEKEIMKELMENGPVQALMEVHEDFFLYQSGIYSH 450
Query: 1286 T--GLRDPFNPFELTNHAVLLVGYGTD-LASG--MDYWIVKNSWGTSWGEDGYFRIPRGT 1450
T L P H+V + G+G + L G + YW NSWG +WGE G+FRI RG
Sbjct: 451 TPVSLGRPERYRRHGTHSVKITGWGEETLPDGRTIKYWTAANSWGPAWGERGHFRIVRGA 510
Query: 1451 DECAIESIAV 1480
+EC IES +
Sbjct: 511 NECDIESFVL 520
>ref|NP_001029607.1| cathepsin K [Bos taurus].
Length = 334
Score = 123 bits (308), Expect = 5e-28
Identities = 80/247 (32%), Positives = 118/247 (47%), Gaps = 11/247 (4%)
Frame = +2
Query: 770 PITAEIQEKSLHLPASWDWR-----NVRGTNFVTPVRNQASCGSCYSFASMGMMEARIRI 934
P + +L++P W+ R + R +VTPV+NQ CGSC++F+S+G +E +++
Sbjct: 101 PASRSRSNDTLYIP-DWEGRAPDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKK 159
Query: 935 LTNNTQTPILSPQEVVSCSQYAQGCAGGFPYLIAGKYAQDFGLVEEACFPYTGTDSPC-- 1108
T LSPQ +V C GC GG+ ++ G+ E +PY G D C
Sbjct: 160 KTGKLLN--LSPQNLVDCVSENDGCGGGYMTNAFQYVQKNRGIDSEDAYPYVGQDENCMY 217
Query: 1109 --TVKEGCFRYYSSEYHYVGGFYGGCNEALMKLELVHHGPMAVAFEV-YDDFLHYRKGIY 1279
T K R Y NE +K + GP++VA + F YRKG+Y
Sbjct: 218 NPTGKAAKCRGYRE--------IPEGNEKALKRAVARVGPISVAIDASLTSFQFYRKGVY 269
Query: 1280 HHTGLRDPFNPFELTNHAVLLVGYGTDLASGMDYWIVKNSWGTSWGEDGYFRIPRG-TDE 1456
+ + NHAVL VGYG + G +WI+KNSWG +WG GY + R +
Sbjct: 270 YDENCNS-----DNLNHAVLAVGYG--IQKGNKHWIIKNSWGENWGNKGYILMARNKNNA 322
Query: 1457 CAIESIA 1477
C I ++A
Sbjct: 323 CGIANLA 329
>ref|NP_776456.1| cathepsin B precursor [Bos taurus].
Length = 335
Score = 122 bits (307), Expect = 7e-28
Identities = 86/262 (32%), Positives = 125/262 (47%), Gaps = 33/262 (12%)
Frame = +2
Query: 806 LPASWDWRNV-RGTNFVTPVRNQASCGSCYSFASMGMMEARIRILTNNTQTPILSPQEVV 982
LP S+D R + +R+Q SCGSC++F ++ + RI I +N +S ++++
Sbjct: 80 LPESFDAREQWPNCPTIKEIRDQGSCGSCWAFGAVEAISDRICIHSNGRVNVEVSAEDML 139
Query: 983 SC--SQYAQGCAGGFPYLIAGKYAQDFGLVEEA-------CFPYT---------GTDSPC 1108
+C + GC GGFP A + GLV C PY+ G+ PC
Sbjct: 140 TCCGGECGDGCNGGFPSG-AWNFWTKKGLVSGGLYNSHVGCRPYSIPPCEHHVNGSRPPC 198
Query: 1109 T-------VKEGCFRYYSSEYHYVGGFYGGC-------NEALMKLELVHHGPMAVAFEVY 1246
T + C YS Y F GC NE + E+ +GP+ AF VY
Sbjct: 199 TGEGDTPKCSKTCEPGYSPSYKEDKHF--GCSSYSVANNEKEIMAEIYKNGPVEGAFSVY 256
Query: 1247 DDFLHYRKGIYHHTGLRDPFNPFELTNHAVLLVGYGTDLASGMDYWIVKNSWGTSWGEDG 1426
DFL Y+ G+Y H + HA+ ++G+G + +G YW+V NSW T WG++G
Sbjct: 257 SDFLLYKSGVYQHVSGEI------MGGHAIRILGWGVE--NGTPYWLVGNSWNTDWGDNG 308
Query: 1427 YFRIPRGTDECAIESIAVAATP 1492
+F+I RG D C IES VA P
Sbjct: 309 FFKILRGQDHCGIESEIVAGMP 330
>ref|NP_001068884.1| cathepsin F [Bos taurus].
Length = 460
Score = 120 bits (302), Expect = 3e-27
Identities = 83/266 (31%), Positives = 127/266 (47%)
Frame = +2
Query: 689 EYETLTLKEMTQRGGGYNQRLPRPKPAPITAEIQEKSLHLPASWDWRNVRGTNFVTPVRN 868
E+ T+ L + + G N R PA ++ P WDWRN VT V++
Sbjct: 219 EFRTIYLNPLLKDAPGRNMR-----PAQPVTDVP------PPQWDWRN---KGAVTNVKD 264
Query: 869 QASCGSCYSFASMGMMEARIRILTNNTQTPILSPQEVVSCSQYAQGCAGGFPYLIAGKYA 1048
Q CGSC++F+ G +E + + + LS QE++ C + + C GG P
Sbjct: 265 QGMCGSCWAFSVTGNVEGQWFLKRGTLLS--LSEQELLDCDKTDKACLGGLPSNAYSAIR 322
Query: 1049 QDFGLVEEACFPYTGTDSPCTVKEGCFRYYSSEYHYVGGFYGGCNEALMKLELVHHGPMA 1228
GL E + Y G C+ + Y ++ + NE + L +GP++
Sbjct: 323 TLGGLETEDDYSYRGRLQTCSFSAEKAKVYINDSVELSK-----NEQKLAAWLAKNGPVS 377
Query: 1229 VAFEVYDDFLHYRKGIYHHTGLRDPFNPFELTNHAVLLVGYGTDLASGMDYWIVKNSWGT 1408
+A + YR GI H LR +P+ L +HAVLLVGYG S + +W +KNSWGT
Sbjct: 378 IAINAFG-MQFYRHGISHP--LRPLCSPW-LIDHAVLLVGYGN--RSAIPFWAIKNSWGT 431
Query: 1409 SWGEDGYFRIPRGTDECAIESIAVAA 1486
WGE+GY+ + RG+ C + +A +A
Sbjct: 432 DWGEEGYYYLHRGSGACGVNIMASSA 457
>ref|NP_001028787.1| cathepsin S precursor [Bos taurus].
Length = 331
Score = 120 bits (300), Expect = 5e-27
Identities = 86/250 (34%), Positives = 129/250 (51%), Gaps = 10/250 (4%)
Frame = +2
Query: 746 RLPRPKPAPITAEIQEKSLHLPASWDWRNVRGTNFVTPVRNQASCGSCYSFASMGMMEAR 925
R+P P +T + + + LP S DWR VT V+ Q +CGSC++F+++G +EA+
Sbjct: 96 RVPSQWPRNVTYK-SDPNQKLPDSMDWRE---KGCVTEVKYQGACGSCWAFSAVGALEAQ 151
Query: 926 IRILTNNTQTPILSPQEVVSCS--QYA-QGCAGGFPYLIAGKYAQDFGLVEEACFPYTGT 1096
+++ T + LS Q +V CS +Y +GC GGF + G+ EA +PY
Sbjct: 152 VKLKTGKLVS--LSAQNLVDCSTAKYGNKGCNGGFMTEAFQYIIDNNGIDSEASYPYKAM 209
Query: 1097 DSPCT--VKEG---CFRYYSSEYHYVGGFYGGCNEALMKLELVHHGPMAVAFEV-YDDFL 1258
D C VK C RY + G EAL K + + GP++V + + F
Sbjct: 210 DGKCQYDVKNRAATCSRYIELPF--------GSEEAL-KEAVANKGPVSVGIDASHSSFF 260
Query: 1259 HYRKGIYHHTGLRDPFNPFELTNHAVLLVGYGTDLASGMDYWIVKNSWGTSWGEDGYFRI 1438
Y+ G+Y+ DP + + NH VL+VGYG G DYW+VKNSWG +G+ GY R+
Sbjct: 261 LYKTGVYY-----DP-SCTQNVNHGVLVVGYGN--LDGKDYWLVKNSWGLHFGDQGYIRM 312
Query: 1439 PRGT-DECAI 1465
R + + C I
Sbjct: 313 ARNSGNHCGI 322
>ref|NP_001071303.1| cathepsin Z precursor [Bos taurus].
Length = 304
Score = 117 bits (292), Expect = 4e-26
Identities = 77/228 (33%), Positives = 104/228 (45%), Gaps = 13/228 (5%)
Frame = +2
Query: 806 LPASWDWRNVRGTNFVTPVRNQ---ASCGSCYSFASMGMMEARIRILTNNT-QTPILSPQ 973
LP SWDWRNV G N+ + RNQ CGSC++ S M RI I + +LS Q
Sbjct: 63 LPKSWDWRNVNGVNYASVTRNQHIPQYCGSCWAHGSTSAMADRINIKRKGAWPSTLLSVQ 122
Query: 974 EVVSCSQYAQGCAGGFPYLIAGKYAQDFGLVEEACFPYTGTDSPCTVKEGCFRYYS-SEY 1150
V+ C A C GG L +YA G+ +E C Y D C C E
Sbjct: 123 HVIDCGD-AGSCEGGND-LPVWEYAHRHGIPDETCNNYQAKDQECDKFNQCGTCTEFKEC 180
Query: 1151 HYVGGF-------YGGCN-EALMKLELVHHGPMAVAFEVYDDFLHYRKGIYHHTGLRDPF 1306
H + + YG + M E+ +GP++ + +Y GIY +
Sbjct: 181 HVIKNYTLWKVGDYGSLSGREKMMAEIYTNGPISCGIMATEKMSNYTGGIYSE------Y 234
Query: 1307 NPFELTNHAVLLVGYGTDLASGMDYWIVKNSWGTSWGEDGYFRIPRGT 1450
N NH V + G+G ++ GM+YWIV+NSWG WGE G+ RI T
Sbjct: 235 NDQAFINHIVSVAGWG--VSDGMEYWIVRNSWGEPWGEHGWMRIVTST 280
Database: RefSeq49_BP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 17,681,374
Number of sequences in database: 33,088
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33088
Number of Hits to DB: 61,424,189
Number of extensions: 1624008
Number of successful extensions: 5001
Number of sequences better than 1.0e-05: 15
Number of HSP's gapped: 4966
Number of HSP's successfully gapped: 15
Length of query: 538
Length of database: 17,681,374
Length adjustment: 107
Effective length of query: 431
Effective length of database: 14,140,958
Effective search space: 6094752898
Effective search space used: 6094752898
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to RefSeqSP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-012940
(1616 letters)
Database: RefSeq49_SP.fasta
24,897 sequences; 11,343,932 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_003129789.1| PREDICTED: dipeptidyl peptidase 1-like [Sus ... 957 0.0
Alignment gi|NP_999094.1| pro-cathepsin H precursor [Sus scrofa]. 150 2e-36
Alignment gi|XP_001927698.3| PREDICTED: tubulointerstitial nephritis anti... 132 4e-31
Alignment gi|NP_001090927.1| cathepsin B precursor [Sus scrofa]. 124 1e-28
Alignment gi|XP_001929706.1| PREDICTED: cathepsin S [Sus scrofa]. 124 2e-28
Alignment gi|XP_003355243.1| PREDICTED: cathepsin S-like [Sus scrofa]. 124 2e-28
Alignment gi|NP_999467.1| cathepsin K precursor [Sus scrofa]. 120 2e-27
Alignment gi|XP_003127800.2| PREDICTED: tubulointerstitial nephritis anti... 120 3e-27
Alignment gi|XP_003122543.2| PREDICTED: cathepsin F [Sus scrofa]. 119 5e-27
Alignment gi|NP_001116576.1| cathepsin Z [Sus scrofa]. 111 1e-24
>ref|XP_003129789.1| PREDICTED: dipeptidyl peptidase 1-like [Sus scrofa].
Length = 463
Score = 957 bits (2475), Expect = 0.0
Identities = 450/463 (97%), Positives = 450/463 (97%)
Frame = +2
Query: 116 MGPRXXXXXXXXXXXXYVAGTAHCDTPANCTYPDLLGTWIFHVGPGGSQRDVNCSVMGPP 295
MGPR YVAGTAHCDTPANCTYPDLLGTWIFHVGPGGSQRDVNCSVMGPP
Sbjct: 1 MGPRLGSLLSALLLLLYVAGTAHCDTPANCTYPDLLGTWIFHVGPGGSQRDVNCSVMGPP 60
Query: 296 EKKVVVHLKKLDTAYDDFGNSGRFTIIYNQGFEIVLNDYKWFAFFKYKEEGRKVTSYCNE 475
EKKVVVHLKKLDTAYDDFGNSGRFTIIYNQGFEIVLNDYKWFAFFKYKEEGRKVTSYCNE
Sbjct: 61 EKKVVVHLKKLDTAYDDFGNSGRFTIIYNQGFEIVLNDYKWFAFFKYKEEGRKVTSYCNE 120
Query: 476 TMTGWVHDVLGRNWACFTGEKAGNTFEKVNVNTAHLKSRQKKYSNRLYKYNHDFVKAING 655
TMTGWVHDVLGRNWACFTGEKAGNTFEKVNVNTAHLKSRQKKYSNRLYKYNHDFVKAING
Sbjct: 121 TMTGWVHDVLGRNWACFTGEKAGNTFEKVNVNTAHLKSRQKKYSNRLYKYNHDFVKAING 180
Query: 656 IQKSWTATAYMEYETLTLKEMTQRGGGYNQRLPRPKPAPITAEIQEKSLHLPASWDWRNV 835
IQKSWTATAYMEYETLTLKEMTQRGGGYNQRLPRPKPAPITAEIQEKSLHLPASWDWRNV
Sbjct: 181 IQKSWTATAYMEYETLTLKEMTQRGGGYNQRLPRPKPAPITAEIQEKSLHLPASWDWRNV 240
Query: 836 RGTNFVTPVRNQASCGSCYSFASMGMMEARIRILTNNTQTPILSPQEVVSCSQYAQGCAG 1015
RGTNFVTPVRNQASCGSCYSFASMGMMEARIRILTNNTQTPILSPQEVVSCSQYAQGCAG
Sbjct: 241 RGTNFVTPVRNQASCGSCYSFASMGMMEARIRILTNNTQTPILSPQEVVSCSQYAQGCAG 300
Query: 1016 GFPYLIAGKYAQDFGLVEEACFPYTGTDSPCTVKEGCFRYYSSEYHYVGGFYGGCNEALM 1195
GFPYLIAGKYAQDFGLVEEACFPYTGTDSPCTVKEGCFRYYSSEYHYVGGFYGGCNEALM
Sbjct: 301 GFPYLIAGKYAQDFGLVEEACFPYTGTDSPCTVKEGCFRYYSSEYHYVGGFYGGCNEALM 360
Query: 1196 KLELVHHGPMAVAFEVYDDFLHYRKGIYHHTGLRDPFNPFELTNHAVLLVGYGTDLASGM 1375
KLELVHHGPMAVAFEVYDDFLHYRKGIYHHTGLRDPFNPFELTNHAVLLVGYGTDLASGM
Sbjct: 361 KLELVHHGPMAVAFEVYDDFLHYRKGIYHHTGLRDPFNPFELTNHAVLLVGYGTDLASGM 420
Query: 1376 DYWIVKNSWGTSWGEDGYFRIPRGTDECAIESIAVAATPIPKL 1504
DYWIVKNSWGTSWGEDGYFRI RGTDECAIESIAVAATPIPKL
Sbjct: 421 DYWIVKNSWGTSWGEDGYFRIRRGTDECAIESIAVAATPIPKL 463
>ref|NP_999094.1| pro-cathepsin H precursor [Sus scrofa].
Length = 335
Score = 150 bits (379), Expect = 2e-36
Identities = 111/333 (33%), Positives = 166/333 (49%), Gaps = 6/333 (1%)
Frame = +2
Query: 518 ACFTGEKAGNTFEKVNVNTAHLKSRQKKYSNRLYKYNHDFVKAINGIQKSWTATAYMEYE 697
AC A ++FEK++ + + QKKYS L +Y+H ++ +K A
Sbjct: 19 ACGASNLAVSSFEKLHFKS-WMVQHQKKYS--LEEYHHRLQVFVSNWRKINAHNAGNHTF 75
Query: 698 TLTLKEMTQRGGG---YNQRLPRPKPAPIT-AEIQEKSLHLPASWDWRNVRGTNFVTPVR 865
L L + + + P+ T + P S DWR + NFV+PV+
Sbjct: 76 KLGLNQFSDMSFDEIRHKYLWSEPQNCSATKGNYLRGTGPYPPSMDWR--KKGNFVSPVK 133
Query: 866 NQASCGSCYSFASMGMMEARIRILTNNTQTPILSPQEVVSCSQYAQ--GCAGGFPYLIAG 1039
NQ SCGSC++F++ G +E+ + I T + L+ Q++V C+Q GC GG P
Sbjct: 134 NQGSCGSCWTFSTTGALESAVAIATGKMLS--LAEQQLVDCAQNFNNHGCQGGLPSQAFE 191
Query: 1040 KYAQDFGLVEEACFPYTGTDSPCTVKEGCFRYYSSEYHYVGGFYGGCNEALMKLELVHHG 1219
+ G++ E +PY G D C + + + V EA+++ +++
Sbjct: 192 YIRYNKGIMGEDTYPYKGQDDHCKFQPDKAIAFVKD---VANITMNDEEAMVEAVALYN- 247
Query: 1220 PMAVAFEVYDDFLHYRKGIYHHTGLRDPFNPFELTNHAVLLVGYGTDLASGMDYWIVKNS 1399
P++ AFEV +DFL YRKGIY T P + NHAVL VGYG + +G+ YWIVKNS
Sbjct: 248 PVSFAFEVTNDFLMYRKGIYSSTSCHK--TP-DKVNHAVLAVGYGEE--NGIPYWIVKNS 302
Query: 1400 WGTSWGEDGYFRIPRGTDECAIESIAVAATPIP 1498
WG WG +GYF I RG + C + A A+ PIP
Sbjct: 303 WGPQWGMNGYFLIERGKNMCGL--AACASYPIP 333
>ref|XP_001927698.3| PREDICTED: tubulointerstitial nephritis antigen [Sus scrofa].
Length = 476
Score = 132 bits (333), Expect = 4e-31
Identities = 98/340 (28%), Positives = 160/340 (47%), Gaps = 30/340 (8%)
Frame = +2
Query: 557 KVNVNTAHLKSRQKKYSNRLYKYNHDFVKAINGIQKSWTATAYMEYETLTLKEMTQRGGG 736
K N N+ +Q S + ++ +N WTA Y ++ +TL+E G
Sbjct: 134 KENCNSCTCSGQQWNCSQHVCLVQPGLIEHVNEGDFGWTAQNYSQFWGMTLEE------G 187
Query: 737 YNQRLPRPKPAPITAEIQEKSLHLPASWDWRNVRGTNFVTP-----VRNQASCGSCYSFA 901
+ RL P+P+ + E + LP + D ++ P +Q +C + ++F+
Sbjct: 188 FKYRLGTLPPSPLLLSMNEVTASLPETTDLPEFFVASYKWPGWTHGPLDQKNCAASWAFS 247
Query: 902 SMGMMEARIRILTNNTQTPILSPQEVVSC-SQYAQGCAGGFPYLIAGKYAQDFGLVEEAC 1078
+ + RI I + T LSPQ ++SC ++ GC G A Y + GLV AC
Sbjct: 248 TASVAADRIAIQSEGRYTANLSPQNLISCCAKNRHGCNSG-SIDRAWWYLRKRGLVSHAC 306
Query: 1079 FPY----TGTDSPCTV---KEGCFRYYSSE------------YHYVGGFYGGCNEALMKL 1201
+P T++ C + +G + ++++ Y + NE +
Sbjct: 307 YPLFKDQNATNNGCAMASRSDGRGKRHATKPCPNNFEKSNRIYQCSPPYRVSSNETEIMR 366
Query: 1202 ELVHHGPMAVAFEVYDDFLHYRKGIYHH-TGLRDPFNPF-ELTNHAVLLVGYGT-DLASG 1372
E++ +GP+ +V++DF HY+ GIY H T + + + +L HAV L G+GT A G
Sbjct: 367 EIMQNGPVQAIMQVHEDFFHYKTGIYRHVTSTNEESDKYRKLRTHAVKLTGWGTLKGAQG 426
Query: 1373 MD--YWIVKNSWGTSWGEDGYFRIPRGTDECAIESIAVAA 1486
+WI NSWG SWGE+GYFRI RG +E IE + +AA
Sbjct: 427 RKEKFWIAANSWGKSWGENGYFRILRGVNESDIEKLIIAA 466
>ref|NP_001090927.1| cathepsin B precursor [Sus scrofa].
Length = 335
Score = 124 bits (311), Expect = 1e-28
Identities = 94/318 (29%), Positives = 145/318 (45%), Gaps = 31/318 (9%)
Frame = +2
Query: 632 DFVKAINGIQKSWTATAYMEYETLTLKEMTQRGGGYNQRLPRPKPAPITAEIQEKSLHLP 811
+ V IN +WTA + + L + + G + P+ A A+ + LP
Sbjct: 29 ELVNFINKQNTTWTAGH--NFYNVDLSYVKKLCGTFLGGPKLPQRAAFAAD-----MILP 81
Query: 812 ASWDWRNV-RGTNFVTPVRNQASCGSCYSFASMGMMEARIRILTNNTQTPILSPQEVVSC 988
S+D R + +R+Q SCGSC++F ++ + RI I +N +S +++++C
Sbjct: 82 KSFDAREQWPNCPTIKEIRDQGSCGSCWAFGAVEAISDRICIRSNGRVNVEVSAEDMLTC 141
Query: 989 --SQYAQGCAGGFPYLIAGKYAQDFGLVEEA-------CFPYT---------GTDSPCT- 1111
+ GC GGFP A + GLV C PY+ G+ PCT
Sbjct: 142 CGDECGDGCNGGFPSG-AWNFWTKKGLVSGGLYDSHVGCRPYSIPPCEHHVNGSRPPCTG 200
Query: 1112 ----------VKEGCFRYYSSEYHYVGGFYG-GCNEALMKLELVHHGPMAVAFEVYDDFL 1258
+ G Y + H+ Y NE + E+ +GP+ AF VY DFL
Sbjct: 201 EGDTPKCSKICEPGYTPSYKEDKHFGCSSYSISRNEKEIMAEIYKNGPVEGAFTVYSDFL 260
Query: 1259 HYRKGIYHHTGLRDPFNPFELTNHAVLLVGYGTDLASGMDYWIVKNSWGTSWGEDGYFRI 1438
Y+ G+Y H + HA+ ++G+G + +G YW+V NSW T WG++G+F+I
Sbjct: 261 QYKSGVYQHV------TGDLMGGHAIRILGWGVE--NGTPYWLVGNSWNTDWGDNGFFKI 312
Query: 1439 PRGTDECAIESIAVAATP 1492
RG D C IES VA P
Sbjct: 313 LRGQDHCGIESEIVAGIP 330
>ref|XP_001929706.1| PREDICTED: cathepsin S [Sus scrofa].
Length = 331
Score = 124 bits (310), Expect = 2e-28
Identities = 83/250 (33%), Positives = 126/250 (50%), Gaps = 10/250 (4%)
Frame = +2
Query: 746 RLPRPKPAPITAEIQEKSLHLPASWDWRNVRGTNFVTPVRNQASCGSCYSFASMGMMEAR 925
R+P P +T + + LP S DWR VT V+ Q SCGSC++F+++G +EA+
Sbjct: 96 RVPSQWPRNVTYK-SNPNQKLPDSMDWRE---KGCVTEVKYQGSCGSCWAFSAVGALEAQ 151
Query: 926 IRILTNNTQTPILSPQEVVSCSQYA---QGCAGGFPYLIAGKYAQDFGLVEEACFPYTGT 1096
+++ T + LS Q +V CS +GC GGF + G+ EA +PY
Sbjct: 152 VKMKTGRLVS--LSAQNLVDCSTEKYRNKGCNGGFMTEAFQYIIDNNGIDSEASYPYKAV 209
Query: 1097 DSPCTVKEG-----CFRYYSSEYHYVGGFYGGCNEALMKLELVHHGPMAVAFEV-YDDFL 1258
D C C RY + +E +K + + GP++VA + + F
Sbjct: 210 DGKCKYDSKNRAATCSRYTELPF---------ADEYALKEAVANKGPVSVAIDAKHSSFF 260
Query: 1259 HYRKGIYHHTGLRDPFNPFELTNHAVLLVGYGTDLASGMDYWIVKNSWGTSWGEDGYFRI 1438
YR G+Y+ DP + + NH VL+VGYG +G DYW+VKNSWG ++G+ GY R+
Sbjct: 261 FYRSGVYY-----DP-SCTQNVNHGVLVVGYGN--LNGKDYWLVKNSWGLNFGDGGYIRM 312
Query: 1439 PRGTD-ECAI 1465
R ++ C I
Sbjct: 313 ARNSENHCGI 322
>ref|XP_003355243.1| PREDICTED: cathepsin S-like [Sus scrofa].
Length = 331
Score = 124 bits (310), Expect = 2e-28
Identities = 83/250 (33%), Positives = 126/250 (50%), Gaps = 10/250 (4%)
Frame = +2
Query: 746 RLPRPKPAPITAEIQEKSLHLPASWDWRNVRGTNFVTPVRNQASCGSCYSFASMGMMEAR 925
R+P P +T + + LP S DWR VT V+ Q SCGSC++F+++G +EA+
Sbjct: 96 RVPSQWPRNVTYK-SNPNQKLPDSMDWRE---KGCVTEVKYQGSCGSCWAFSAVGALEAQ 151
Query: 926 IRILTNNTQTPILSPQEVVSCSQYA---QGCAGGFPYLIAGKYAQDFGLVEEACFPYTGT 1096
+++ T + LS Q +V CS +GC GGF + G+ EA +PY
Sbjct: 152 VKMKTGRLVS--LSAQNLVDCSTEKYRNKGCNGGFMTEAFQYIIDNNGIDSEASYPYKAV 209
Query: 1097 DSPCTVKEG-----CFRYYSSEYHYVGGFYGGCNEALMKLELVHHGPMAVAFEV-YDDFL 1258
D C C RY + +E +K + + GP++VA + + F
Sbjct: 210 DGKCKYDSKNRAATCSRYTELPF---------ADEYALKEAVANKGPVSVAIDAKHSSFF 260
Query: 1259 HYRKGIYHHTGLRDPFNPFELTNHAVLLVGYGTDLASGMDYWIVKNSWGTSWGEDGYFRI 1438
YR G+Y+ DP + + NH VL+VGYG +G DYW+VKNSWG ++G+ GY R+
Sbjct: 261 FYRSGVYY-----DP-SCTQNVNHGVLVVGYGN--LNGKDYWLVKNSWGLNFGDGGYIRM 312
Query: 1439 PRGTD-ECAI 1465
R ++ C I
Sbjct: 313 ARNSENHCGI 322
>ref|NP_999467.1| cathepsin K precursor [Sus scrofa].
Length = 330
Score = 120 bits (301), Expect = 2e-27
Identities = 78/238 (32%), Positives = 115/238 (48%), Gaps = 11/238 (4%)
Frame = +2
Query: 797 SLHLPASWDWR-----NVRGTNFVTPVRNQASCGSCYSFASMGMMEARIRILTNNTQTPI 961
+L++P W+ R + R +VTPV+NQ CGSC++F+S+G +E +++ T
Sbjct: 106 TLYIP-DWEGRTPDSIDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLN-- 162
Query: 962 LSPQEVVSCSQYAQGCAGGFPYLIAGKYAQDFGLVEEACFPYTGTDSPC----TVKEGCF 1129
LSPQ +V C GC GG+ ++ G+ E +PY G D C T K
Sbjct: 163 LSPQNLVDCVSENDGCGGGYMTNAFQYVQKNRGIDSEDAYPYVGQDENCMYNPTGKAAKC 222
Query: 1130 RYYSSEYHYVGGFYGGCNEALMKLELVHHGPMAVAFEV-YDDFLHYRKGIYHHTGLRDPF 1306
R Y NE +K + GP++VA + F Y KG+Y+
Sbjct: 223 RGYRE--------IPEGNEKALKRAVARVGPVSVAIDASLTSFQFYSKGVYYDENCNS-- 272
Query: 1307 NPFELTNHAVLLVGYGTDLASGMDYWIVKNSWGTSWGEDGYFRIPRG-TDECAIESIA 1477
+ NHAVL VGYG + G +WI+KNSWG +WG GY + R + C I ++A
Sbjct: 273 ---DNLNHAVLAVGYG--IQKGKKHWIIKNSWGENWGNKGYILMARNKNNACGIANLA 325
>ref|XP_003127800.2| PREDICTED: tubulointerstitial nephritis antigen [Sus scrofa].
Length = 362
Score = 120 bits (300), Expect = 3e-27
Identities = 90/321 (28%), Positives = 147/321 (45%), Gaps = 38/321 (11%)
Frame = +2
Query: 632 DFVKAINGIQKSWTATAYMEYETLTLKEMTQRGGGYNQRLPRPKPAPITAEIQEKSLH-- 805
D +KAIN W A + + +TL E G RL +P+ A + E +H
Sbjct: 40 DMIKAINQGNYGWRAGNHSAFWGMTLDE------GIRYRLGTIRPSSSVANMNE--IHTV 91
Query: 806 ------LPASWDWRNVRGTNFVTPVRNQASCGSCYSFASMGMMEARIRILTNNTQTPILS 967
LP +++ + + N + +Q +C ++F++ + R+ I + TP+LS
Sbjct: 92 LGPGEVLPRAFE-ASEKWPNLIHDPLDQGNCAGSWAFSTAAVASDRVSIHSLGHMTPVLS 150
Query: 968 PQEVVSCSQY-AQGCAGGFPYLIAGK--YAQDFGLVEEACFPYTGTDSP-------CTVK 1117
PQ ++SC + QGC GG + G + + G+V + C+P++G + C +
Sbjct: 151 PQNLLSCDTHNQQGCQGG---RLDGAWWFLRRRGVVSDHCYPFSGHERNEAGPAPRCMMH 207
Query: 1118 E---------------GCFRYYSSEYHYVGGFYGGCNEALMKLELVHHGPMAVAFEVYDD 1252
+ + + Y + G NE + EL+ +GP+ EV++D
Sbjct: 208 SRAMGRGKRQATARCPNSYVHANDIYQVTPAYRLGSNEKDIMKELMENGPVQALMEVHED 267
Query: 1253 FLHYRKGIYHHTGLRD--PFNPFELTNHAVLLVGYGTD-LASG--MDYWIVKNSWGTSWG 1417
F Y+ GIY HT + P H+V + G+G + L G + YW NSWG WG
Sbjct: 268 FFLYQSGIYSHTPVSHGRPERYRRHGTHSVKITGWGEETLPDGRMLKYWTAANSWGPGWG 327
Query: 1418 EDGYFRIPRGTDECAIESIAV 1480
E G+FRI RG +EC IES +
Sbjct: 328 ERGHFRIVRGANECDIESFVL 348
>ref|XP_003122543.2| PREDICTED: cathepsin F [Sus scrofa].
Length = 490
Score = 119 bits (298), Expect = 5e-27
Identities = 84/266 (31%), Positives = 123/266 (46%)
Frame = +2
Query: 689 EYETLTLKEMTQRGGGYNQRLPRPKPAPITAEIQEKSLHLPASWDWRNVRGTNFVTPVRN 868
E+ T+ L + Q G RL + S P WDWR VT V++
Sbjct: 249 EFRTIYLNPLLQEEPGRKMRLAK-----------SVSSLPPPEWDWRK---KGAVTKVKD 294
Query: 869 QASCGSCYSFASMGMMEARIRILTNNTQTPILSPQEVVSCSQYAQGCAGGFPYLIAGKYA 1048
Q CGSC++F+ G +E + + + LS QE++ C + +GC GG P
Sbjct: 295 QGMCGSCWAFSVTGNVEGQWFLKQGTLLS--LSEQELLDCDKVDKGCMGGLPSNAYSAIK 352
Query: 1049 QDFGLVEEACFPYTGTDSPCTVKEGCFRYYSSEYHYVGGFYGGCNEALMKLELVHHGPMA 1228
GL E + Y G C+ + Y ++ + NE + L GP++
Sbjct: 353 TLGGLETEEDYSYRGHLQTCSFNAEKAKVYINDSVELSQ-----NEQKLAAWLAEKGPIS 407
Query: 1229 VAFEVYDDFLHYRKGIYHHTGLRDPFNPFELTNHAVLLVGYGTDLASGMDYWIVKNSWGT 1408
VA + YR GI H LR +P+ L +HAVLLVGYG S +W +KNSWGT
Sbjct: 408 VAINAFG-MQFYRHGISHP--LRPLCSPW-LIDHAVLLVGYGN--RSATPFWAIKNSWGT 461
Query: 1409 SWGEDGYFRIPRGTDECAIESIAVAA 1486
WGE+GY+ + RG+ C + +A +A
Sbjct: 462 DWGEEGYYYLYRGSGACGVNIMASSA 487
>ref|NP_001116576.1| cathepsin Z [Sus scrofa].
Length = 304
Score = 111 bits (277), Expect = 1e-24
Identities = 74/228 (32%), Positives = 100/228 (43%), Gaps = 13/228 (5%)
Frame = +2
Query: 806 LPASWDWRNVRGTNFVTPVRNQ---ASCGSCYSFASMGMMEARIRILTNNT-QTPILSPQ 973
LP SWDWRNV G N+ + RNQ CGSC++ S M RI I + +LS Q
Sbjct: 63 LPRSWDWRNVNGVNYASVTRNQHIPQYCGSCWAHGSTSAMADRINIKRKGAWPSTLLSVQ 122
Query: 974 EVVSCSQYAQGCAGGFPYLIAGKYAQDFGLVEEACFPYTGTDS---------PCTVKEGC 1126
V+ C A C GG L YA G+ +E C Y D CT + C
Sbjct: 123 HVIDCGN-AGSCEGGDD-LPVWAYAHRHGIPDETCNNYQAKDQVCDKFNQCGTCTEFKEC 180
Query: 1127 FRYYSSEYHYVGGFYGGCNEALMKLELVHHGPMAVAFEVYDDFLHYRKGIYHHTGLRDPF 1306
+ VG + M E+ +GP++ + +Y GIY +
Sbjct: 181 HVIQNYTLWKVGDYGSVSGREKMMAEIYANGPISCGIMATEKMSNYTGGIYAE------Y 234
Query: 1307 NPFELTNHAVLLVGYGTDLASGMDYWIVKNSWGTSWGEDGYFRIPRGT 1450
NH V + G+G ++ G +YWIV+NSWG WGE G+ RI T
Sbjct: 235 KDQAYINHIVSVAGWG--VSGGTEYWIVRNSWGEPWGERGWMRIVTST 280
Database: RefSeq49_SP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 11,343,932
Number of sequences in database: 24,897
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 24897
Number of Hits to DB: 39,588,746
Number of extensions: 1045746
Number of successful extensions: 3363
Number of sequences better than 1.0e-05: 15
Number of HSP's gapped: 3324
Number of HSP's successfully gapped: 16
Length of query: 538
Length of database: 11,343,932
Length adjustment: 104
Effective length of query: 434
Effective length of database: 8,754,644
Effective search space: 3799515496
Effective search space used: 3799515496
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to RefSeqMP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-012940
(1616 letters)
Database: RefSeq49_MP.fasta
30,036 sequences; 15,617,559 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_034112.3| dipeptidyl peptidase 1 preproprotein [Mus muscu... 743 0.0
Alignment gi|NP_031827.2| pro-cathepsin H preproprotein [Mus musculus]. 147 2e-35
Alignment gi|NP_036137.1| cathepsin J [Mus musculus]. 132 1e-30
Alignment gi|NP_036163.3| tubulointerstitial nephritis antigen [Mus muscu... 130 4e-30
Alignment gi|NP_031828.2| cathepsin K precursor [Mus musculus]. 122 8e-28
Alignment gi|NP_062412.1| cathepsin 7 [Mus musculus]. 121 1e-27
Alignment gi|NP_067256.2| cathepsin S preproprotein [Mus musculus]. 119 5e-27
Alignment gi|NP_001161805.1| tubulointerstitial nephritis antigen-like pr... 119 7e-27
Alignment gi|NP_075965.2| tubulointerstitial nephritis antigen-like precu... 119 7e-27
Alignment gi|NP_063914.1| cathepsin F precursor [Mus musculus]. 119 9e-27
>ref|NP_034112.3| dipeptidyl peptidase 1 preproprotein [Mus musculus].
Length = 462
Score = 743 bits (1918), Expect = 0.0
Identities = 339/443 (76%), Positives = 385/443 (86%)
Frame = +2
Query: 176 TAHCDTPANCTYPDLLGTWIFHVGPGGSQRDVNCSVMGPPEKKVVVHLKKLDTAYDDFGN 355
T DTPANCTYPDLLGTW+F VGP S+ D+NCSVM E+KVVVHLKKLDTAYD+ GN
Sbjct: 21 TVRSDTPANCTYPDLLGTWVFQVGPRSSRSDINCSVMEATEEKVVVHLKKLDTAYDELGN 80
Query: 356 SGRFTIIYNQGFEIVLNDYKWFAFFKYKEEGRKVTSYCNETMTGWVHDVLGRNWACFTGE 535
SG FT+IYNQGFEIVLNDYKWFAFFKY+ G SYC+ETMTGWVHDVLGRNWACF G+
Sbjct: 81 SGHFTLIYNQGFEIVLNDYKWFAFFKYEVRGHTAISYCHETMTGWVHDVLGRNWACFVGK 140
Query: 536 KAGNTFEKVNVNTAHLKSRQKKYSNRLYKYNHDFVKAINGIQKSWTATAYMEYETLTLKE 715
K + EKVN+N AHL Q++YS RLY +NH+FVKAIN +QKSWTATAY EYE ++L++
Sbjct: 141 KVESHIEKVNMNAAHLGGLQERYSERLYTHNHNFVKAINTVQKSWTATAYKEYEKMSLRD 200
Query: 716 MTQRGGGYNQRLPRPKPAPITAEIQEKSLHLPASWDWRNVRGTNFVTPVRNQASCGSCYS 895
+ +R G ++QR+PRPKPAP+T EIQ++ L+LP SWDWRNV+G N+V+PVRNQ SCGSCYS
Sbjct: 201 LIRRSG-HSQRIPRPKPAPMTDEIQQQILNLPESWDWRNVQGVNYVSPVRNQESCGSCYS 259
Query: 896 FASMGMMEARIRILTNNTQTPILSPQEVVSCSQYAQGCAGGFPYLIAGKYAQDFGLVEEA 1075
FASMGM+EARIRILTNN+QTPILSPQEVVSCS YAQGC GGFPYLIAGKYAQDFG+VEE+
Sbjct: 260 FASMGMLEARIRILTNNSQTPILSPQEVVSCSPYAQGCDGGFPYLIAGKYAQDFGVVEES 319
Query: 1076 CFPYTGTDSPCTVKEGCFRYYSSEYHYVGGFYGGCNEALMKLELVHHGPMAVAFEVYDDF 1255
CFPYT DSPC +E C RYYSS+Y+YVGGFYGGCNEALMKLELV HGPMAVAFEV+DDF
Sbjct: 320 CFPYTAKDSPCKPRENCLRYYSSDYYYVGGFYGGCNEALMKLELVKHGPMAVAFEVHDDF 379
Query: 1256 LHYRKGIYHHTGLRDPFNPFELTNHAVLLVGYGTDLASGMDYWIVKNSWGTSWGEDGYFR 1435
LHY GIYHHTGL DPFNPFELTNHAVLLVGYG D +G++YWI+KNSWG++WGE GYFR
Sbjct: 380 LHYHSGIYHHTGLSDPFNPFELTNHAVLLVGYGRDPVTGIEYWIIKNSWGSNWGESGYFR 439
Query: 1436 IPRGTDECAIESIAVAATPIPKL 1504
I RGTDECAIESIAVAA PIPKL
Sbjct: 440 IRRGTDECAIESIAVAAIPIPKL 462
>ref|NP_031827.2| pro-cathepsin H preproprotein [Mus musculus].
Length = 333
Score = 147 bits (372), Expect = 2e-35
Identities = 108/336 (32%), Positives = 165/336 (49%), Gaps = 10/336 (2%)
Frame = +2
Query: 527 TGEKAGNTFEKVNVNTAHLKSRQKKYSNRLYKYNHDFVKAINGIQKSWTATAYMEYETLT 706
T E N EK + + +K QK YS+ +YNH N +K +
Sbjct: 20 TAELTVNAIEKFHFKS-WMKQHQKTYSS--VEYNHRLQMFANNWRKIQAHNQRNHTFKMA 76
Query: 707 LKEMTQRG-GGYNQRLPRPKPAPITAEIQEKSLHL------PASWDWRNVRGTNFVTPVR 865
L + + + +P +A KS +L P+S DWR + N V+PV+
Sbjct: 77 LNQFSDMSFAEIKHKFLWSEPQNCSAT---KSNYLRGTGPYPSSMDWR--KKGNVVSPVK 131
Query: 866 NQASCGSCYSFASMGMMEARIRILTNNTQTPILSPQEVVSCSQYAQ--GCAGGFPYLIAG 1039
NQ +CGSC++F++ G +E+ + I + + L+ Q++V C+Q GC GG P
Sbjct: 132 NQGACGSCWTFSTTGALESAVAIASGKMLS--LAEQQLVDCAQAFNNHGCKGGLPSQAFE 189
Query: 1040 KYAQDFGLVEEACFPYTGTDSPCTVK-EGCFRYYSSEYHYVGGFYGGCNEALMKLELVHH 1216
+ G++EE +PY G DS C + + + + +EA M + +
Sbjct: 190 YILYNKGIMEEDSYPYIGKDSSCRFNPQKAVAFVKNVVNITLN-----DEAAMVEAVALY 244
Query: 1217 GPMAVAFEVYDDFLHYRKGIYHHTGLRDPFNPFELTNHAVLLVGYGTDLASGMDYWIVKN 1396
P++ AFEV +DFL Y+ G+Y P + NHAVL VGYG +G+ YWIVKN
Sbjct: 245 NPVSFAFEVTEDFLMYKSGVYSSKSCHK--TP-DKVNHAVLAVGYGEQ--NGLLYWIVKN 299
Query: 1397 SWGTSWGEDGYFRIPRGTDECAIESIAVAATPIPKL 1504
SWG+ WGE+GYF I RG + C + A A+ PIP++
Sbjct: 300 SWGSQWGENGYFLIERGKNMCGL--AACASYPIPQV 333
>ref|NP_036137.1| cathepsin J [Mus musculus].
Length = 333
Score = 132 bits (331), Expect = 1e-30
Identities = 87/248 (35%), Positives = 128/248 (51%), Gaps = 8/248 (3%)
Frame = +2
Query: 758 PKPAPITAEIQEK--SLHLPASWDWRNVRGTNFVTPVRNQASCGSCYSFASMGMMEARIR 931
P PA +T + S+ LP DWR +VTPVRNQ CGSC++FA+ G +E ++
Sbjct: 95 PIPAAMTDPHAQNHVSIGLPDYKDWRE---EGYVTPVRNQGKCGSCWAFAAAGAIEGQMF 151
Query: 932 ILTNNTQTPILSPQEVVSCSQYA--QGCAGGFPYLIAGKYAQDFGLVEEACFPYTGTDSP 1105
T N TP LS Q ++ CS+ +GC G + ++ GL EA +PY G D P
Sbjct: 152 WKTGNL-TP-LSVQNLLDCSKTVGNKGCQSGTAHQAFEYVLKNKGLEAEATYPYEGKDGP 209
Query: 1106 CTVKEGCFRYYSSEYHYVGGFYGGCNEALMKLELVHHGPMAVAFEV-YDDFLHYRKGIYH 1282
C + ++Y + NE + + + GP++ A + +D F Y GIY+
Sbjct: 210 CRYRSENASANITDYVNLPP-----NELYLWVAVASIGPVSAAIDASHDSFRFYNGGIYY 264
Query: 1283 HTGLRDPFNPFELTNHAVLLVGYGT--DLASGMDYWIVKNSWGTSWGEDGYFRIPRG-TD 1453
F NHAVL+VGYG+ D+ G +YW++KNSWG WG +GY +I + +
Sbjct: 265 EPNCSSYF-----VNHAVLVVGYGSEGDVKDGNNYWLIKNSWGEEWGMNGYMQIAKDHNN 319
Query: 1454 ECAIESIA 1477
C I S+A
Sbjct: 320 HCGIASLA 327
>ref|NP_036163.3| tubulointerstitial nephritis antigen [Mus musculus].
Length = 475
Score = 130 bits (326), Expect = 4e-30
Identities = 95/340 (27%), Positives = 153/340 (45%), Gaps = 30/340 (8%)
Frame = +2
Query: 557 KVNVNTAHLKSRQKKYSNRLYKYNHDFVKAINGIQKSWTATAYMEYETLTLKEMTQRGGG 736
K N N+ +Q K S + + + + IN WTA Y ++ +TL+E G
Sbjct: 133 KENCNSCTCSGQQWKCSQHVCLVHPELIDHINKGDYGWTAQNYSQFWGMTLEE------G 186
Query: 737 YNQRLPRPKPAPITAEIQEKSLHLPASWDWRNVRGTNFVTP-----VRNQASCGSCYSFA 901
+ RL P+P+ + E + P D + ++ P +Q +C + ++F+
Sbjct: 187 FKFRLGTLPPSPMLLSMNEMTASFPPRADLPEIFIASYKWPGWTHGPLDQKNCAASWAFS 246
Query: 902 SMGMMEARIRILTNNTQTPILSPQEVVSC-SQYAQGCAGGFPYLIAGKYAQDFGLVEEAC 1078
+ + RI I + T LSPQ ++SC ++ GC G A + + GLV AC
Sbjct: 247 TASVAADRIAIQSKGRYTANLSPQNLISCCAKNRHGCNSG-SIDRAWWFLRKRGLVSHAC 305
Query: 1079 FPY----TGTDSPCTVKE---------------GCFRYYSSEYHYVGGFYGGCNEALMKL 1201
+P T++ C + F + Y + NE +
Sbjct: 306 YPLFKDQNTTNNICAMASRSDGRGKRHATKPCPNSFEKSNRIYQCSPPYRVSSNETEIMR 365
Query: 1202 ELVHHGPMAVAFEVYDDFLHYRKGIYHH--TGLRDPFNPFELTNHAVLLVGYGT---DLA 1366
E++ +GP+ +V++DF +Y+ GIY H + +P +L HAV L G+GT
Sbjct: 366 EIIQNGPVQAIMQVHEDFFYYKTGIYRHVVSTNEEPEKYKKLRTHAVKLTGWGTLRGARG 425
Query: 1367 SGMDYWIVKNSWGTSWGEDGYFRIPRGTDECAIESIAVAA 1486
+WI NSWG SWGE+GYFRI RG +E IE + +AA
Sbjct: 426 KKEKFWIAANSWGKSWGENGYFRILRGVNESDIEKLIIAA 465
>ref|NP_031828.2| cathepsin K precursor [Mus musculus].
Length = 329
Score = 122 bits (306), Expect = 8e-28
Identities = 81/230 (35%), Positives = 114/230 (49%), Gaps = 6/230 (2%)
Frame = +2
Query: 806 LPASWDWRNVRGTNFVTPVRNQASCGSCYSFASMGMMEARIRILTNNTQTPILSPQEVVS 985
+P S D+R +VTPV+NQ CGSC++F+S G +E +++ T LSPQ +V
Sbjct: 115 VPDSIDYRK---KGYVTPVKNQGQCGSCWAFSSAGALEGQLKKKTGKLLA--LSPQNLVD 169
Query: 986 CSQYAQGCAGGFPYLIAGKYAQDFGLVEEACFPYTGTDSPC----TVKEGCFRYYSSEYH 1153
C GC GG+ Q+ G+ E +PY G D C T K R Y
Sbjct: 170 CVTENYGCGGGYMTTAFQYVQQNGGIDSEDAYPYVGQDESCMYNATAKAAKCRGYRE--I 227
Query: 1154 YVGGFYGGCNEALMKLELVHHGPMAVAFEV-YDDFLHYRKGIYHHTGLRDPFNPFELTNH 1330
VG NE +K + GP++V+ + F Y +G+Y+ D + NH
Sbjct: 228 PVG------NEKALKRAVARVGPISVSIDASLASFQFYSRGVYY-----DENCDRDNVNH 276
Query: 1331 AVLLVGYGTDLASGMDYWIVKNSWGTSWGEDGYFRIPRG-TDECAIESIA 1477
AVL+VGYGT G +WI+KNSWG SWG GY + R + C I ++A
Sbjct: 277 AVLVVGYGTQ--KGSKHWIIKNSWGESWGNKGYALLARNKNNACGITNMA 324
>ref|NP_062412.1| cathepsin 7 [Mus musculus].
Length = 331
Score = 121 bits (304), Expect = 1e-27
Identities = 89/274 (32%), Positives = 129/274 (47%), Gaps = 8/274 (2%)
Frame = +2
Query: 683 YMEYETLTLKEMTQRGGGYNQRLPRPKPAPIT--AEIQEKSLHLPASWDWRNVRGTNFVT 856
+M T+ + E G + L P+ IQ+++ +P + DWR +VT
Sbjct: 69 WMNNFTIEMNEFGDMTGEEMKMLTESSSYPLRNGKHIQKRNPKIPPTLDWRK---EGYVT 125
Query: 857 PVRNQASCGSCYSFASMGMMEARIRILTNNTQTPILSPQEVVSCSQY--AQGCAGGFPYL 1030
PVR Q SCG+C++F+ +E ++ T LS Q ++ CS +GC GG PY
Sbjct: 126 PVRRQGSCGACWAFSVTACIEGQLFKKTGKLIP--LSVQNLMDCSVSYGTKGCDGGRPYD 183
Query: 1031 IAGKYAQDFGLVEEACFPYTGTDSPCTVKEGCFRYYSSEYHYVGGFYGGCNEALMKLELV 1210
+ GL EA +PY C +R S F NE + LV
Sbjct: 184 AFQYVKNNGGLEAEATYPYEAKAKHCR-----YRPERSVVKVNRFFVVPRNEEALLQALV 238
Query: 1211 HHGPMAVAFE-VYDDFLHYRKGIYHHTGLRDPFNPFELTNHAVLLVGYGTD--LASGMDY 1381
HGP+AVA + + F YR GIYH R + +H +LLVGYG + + Y
Sbjct: 239 THGPIAVAIDGSHASFHSYRGGIYHEPKCRK-----DTLDHGLLLVGYGYEGHESENRKY 293
Query: 1382 WIVKNSWGTSWGEDGYFRIPRGTDE-CAIESIAV 1480
W++KNS G WGE+GY ++PRG + C I S A+
Sbjct: 294 WLLKNSHGERWGENGYMKLPRGQNNYCGIASYAM 327
>ref|NP_067256.2| cathepsin S preproprotein [Mus musculus].
Length = 340
Score = 119 bits (299), Expect = 5e-27
Identities = 96/320 (30%), Positives = 153/320 (47%), Gaps = 24/320 (7%)
Frame = +2
Query: 584 KSRQKKYSNR--------LYKYNHDFVKAINGIQKSWTATAYM----EYETLTLKEMTQR 727
K+ +K+Y ++ +++ N F+ I+ ++ S Y + +T +E+ R
Sbjct: 41 KTHEKEYKDKNEEEVRRLIWEKNLKFIM-IHNLEYSMGMHTYQVGMNDMGDMTNEEILCR 99
Query: 728 GGGYNQRLPRPKPAPITAEIQEKSLHLPASWDWRNVRGTNFVTPVRNQASCGSCYSFASM 907
G R+PR P +T LP + DWR VT V+ Q SCG+C++F+++
Sbjct: 100 MGAL--RIPRQSPKTVTFRSYSNRT-LPDTVDWRE---KGCVTEVKYQGSCGACWAFSAV 153
Query: 908 GMMEARIRILTNNTQTPILSPQEVVSCSQYAQ----GCAGGFPYLIAGKYAQDFGLVE-E 1072
G +E ++++ T + LS Q +V CS + GC GG+ A +Y D G +E +
Sbjct: 154 GALEGQLKLKTGKLIS--LSAQNLVDCSNEEKYGNKGCGGGY-MTEAFQYIIDNGGIEAD 210
Query: 1073 ACFPYTGTDSPCTVKEG-----CFRYYSSEYHYVGGFYGGCNEALMKLELVHHGPMAVAF 1237
A +PY TD C C RY + +E +K + GP++V
Sbjct: 211 ASYPYKATDEKCHYNSKNRAATCSRYIQLPFG---------DEDALKEAVATKGPVSVGI 261
Query: 1238 EV-YDDFLHYRKGIYHHTGLRDPFNPFELTNHAVLLVGYGTDLASGMDYWIVKNSWGTSW 1414
+ + F Y+ G+Y DP + NH VL+VGYGT G DYW+VKNSWG ++
Sbjct: 262 DASHSSFFFYKSGVYD-----DPSCTGNV-NHGVLVVGYGT--LDGKDYWLVKNSWGLNF 313
Query: 1415 GEDGYFRIPRGT-DECAIES 1471
G+ GY R+ R + C I S
Sbjct: 314 GDQGYIRMARNNKNHCGIAS 333
>ref|NP_001161805.1| tubulointerstitial nephritis antigen-like precursor [Mus musculus].
Length = 466
Score = 119 bits (298), Expect = 7e-27
Identities = 92/319 (28%), Positives = 150/319 (47%), Gaps = 36/319 (11%)
Frame = +2
Query: 632 DFVKAINGIQKSWTATAYMEYETLTLKEMTQRGGGYNQRLPRPKPAPITAEIQE------ 793
D +KAIN W A + + +TL E G RL +P+ + E
Sbjct: 144 DMIKAINRGNYGWQAGNHSAFWGMTLDE------GIRYRLGTIRPSSTVMNMNEIYTVLG 197
Query: 794 KSLHLPASWDWRNVRGTNFVTPVRNQASCGSCYSFASMGMMEARIRILTNNTQTPILSPQ 973
+ LP +++ + + N + +Q +C ++F++ + R+ I + TPILSPQ
Sbjct: 198 QGEVLPTAFE-ASEKWPNLIHEPLDQGNCAGSWAFSTAAVASDRVSIHSLGHMTPILSPQ 256
Query: 974 EVVSC-SQYAQGCAGGFPYLIAGK--YAQDFGLVEEACFPYTGTD----SP---CTVKEG 1123
++SC + + QGC GG + G + + G+V + C+P++G + SP C +
Sbjct: 257 NLLSCDTHHQQGCRGG---RLDGAWWFLRRRGVVSDNCYPFSGREQNEASPTPRCMMHSR 313
Query: 1124 CF----RYYSSE-----------YHYVGGFYGGCNEALMKLELVHHGPMAVAFEVYDDFL 1258
R +S Y + G +E + EL+ +GP+ EV++DF
Sbjct: 314 AMGRGKRQATSRCPNGQVDSNDIYQVTPAYRLGSDEKEIMKELMENGPVQALMEVHEDFF 373
Query: 1259 HYRKGIYHHTGLRD--PFNPFELTNHAVLLVGYGTD-LASG--MDYWIVKNSWGTSWGED 1423
Y++GIY HT + P H+V + G+G + L G + YW NSWG WGE
Sbjct: 374 LYQRGIYSHTPVSQGRPEQYRRHGTHSVKITGWGEETLPDGRTIKYWTAANSWGPWWGER 433
Query: 1424 GYFRIPRGTDECAIESIAV 1480
G+FRI RGT+EC IE+ +
Sbjct: 434 GHFRIVRGTNECDIETFVL 452
>ref|NP_075965.2| tubulointerstitial nephritis antigen-like precursor [Mus musculus].
Length = 466
Score = 119 bits (298), Expect = 7e-27
Identities = 92/319 (28%), Positives = 150/319 (47%), Gaps = 36/319 (11%)
Frame = +2
Query: 632 DFVKAINGIQKSWTATAYMEYETLTLKEMTQRGGGYNQRLPRPKPAPITAEIQE------ 793
D +KAIN W A + + +TL E G RL +P+ + E
Sbjct: 144 DMIKAINRGNYGWQAGNHSAFWGMTLDE------GIRYRLGTIRPSSTVMNMNEIYTVLG 197
Query: 794 KSLHLPASWDWRNVRGTNFVTPVRNQASCGSCYSFASMGMMEARIRILTNNTQTPILSPQ 973
+ LP +++ + + N + +Q +C ++F++ + R+ I + TPILSPQ
Sbjct: 198 QGEVLPTAFE-ASEKWPNLIHEPLDQGNCAGSWAFSTAAVASDRVSIHSLGHMTPILSPQ 256
Query: 974 EVVSC-SQYAQGCAGGFPYLIAGK--YAQDFGLVEEACFPYTGTD----SP---CTVKEG 1123
++SC + + QGC GG + G + + G+V + C+P++G + SP C +
Sbjct: 257 NLLSCDTHHQQGCRGG---RLDGAWWFLRRRGVVSDNCYPFSGREQNEASPTPRCMMHSR 313
Query: 1124 CF----RYYSSE-----------YHYVGGFYGGCNEALMKLELVHHGPMAVAFEVYDDFL 1258
R +S Y + G +E + EL+ +GP+ EV++DF
Sbjct: 314 AMGRGKRQATSRCPNGQVDSNDIYQVTPAYRLGSDEKEIMKELMENGPVQALMEVHEDFF 373
Query: 1259 HYRKGIYHHTGLRD--PFNPFELTNHAVLLVGYGTD-LASG--MDYWIVKNSWGTSWGED 1423
Y++GIY HT + P H+V + G+G + L G + YW NSWG WGE
Sbjct: 374 LYQRGIYSHTPVSQGRPEQYRRHGTHSVKITGWGEETLPDGRTIKYWTAANSWGPWWGER 433
Query: 1424 GYFRIPRGTDECAIESIAV 1480
G+FRI RGT+EC IE+ +
Sbjct: 434 GHFRIVRGTNECDIETFVL 452
>ref|NP_063914.1| cathepsin F precursor [Mus musculus].
Length = 462
Score = 119 bits (297), Expect = 9e-27
Identities = 83/269 (30%), Positives = 121/269 (44%), Gaps = 3/269 (1%)
Frame = +2
Query: 689 EYETLTLKEMTQRGGGYNQRLPRPKPAPITAEIQEKSLHLPASWDWRNVRGTNFVTPVRN 868
E+ T+ L + Q+ G PA ++ P WDWR VT V+N
Sbjct: 221 EFHTIYLNPLLQKESGRKM-----SPAKSINDLA------PPEWDWRK---KGAVTEVKN 266
Query: 869 QASCGSCYSFASMGMMEARIRILTNNTQTPILSPQEVVSCSQYAQGCAGGFPYLIAGKYA 1048
Q CGSC++F+ G +E + + N LS QE++ C + + C GG P
Sbjct: 267 QGMCGSCWAFSVTGNVEGQWFL--NRGTLLSLSEQELLDCDKVDKACLGGLPSNAYAAIK 324
Query: 1049 QDFGLVEEACFPYTGTDSPCTVKEGCFRYYSSEYHYVGGFYGGCNEALMKLELVHHGPMA 1228
GL E + Y G C + Y ++ + NE + L GP++
Sbjct: 325 NLGGLETEDDYGYQGHVQTCNFSAQMAKVYINDSVELSR-----NENKIAAWLAQKGPIS 379
Query: 1229 VAFEVYDDFLHYRKGIYHHTGLRDPFNPF---ELTNHAVLLVGYGTDLASGMDYWIVKNS 1399
VA + YR GI H PF P +HAVLLVGYG S + YW +KNS
Sbjct: 380 VAINAFG-MQFYRHGIAH------PFRPLCSPWFIDHAVLLVGYGN--RSNIPYWAIKNS 430
Query: 1400 WGTSWGEDGYFRIPRGTDECAIESIAVAA 1486
WG+ WGE+GY+ + RG+ C + ++A +A
Sbjct: 431 WGSDWGEEGYYYLYRGSGACGVNTMASSA 459
Database: RefSeq49_MP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 15,617,559
Number of sequences in database: 30,036
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 30036
Number of Hits to DB: 53,413,836
Number of extensions: 1391779
Number of successful extensions: 4415
Number of sequences better than 1.0e-05: 27
Number of HSP's gapped: 4339
Number of HSP's successfully gapped: 29
Length of query: 538
Length of database: 15,617,559
Length adjustment: 106
Effective length of query: 432
Effective length of database: 12,433,743
Effective search space: 5371376976
Effective search space used: 5371376976
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to RefSeqHP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-012940
(1616 letters)
Database: RefSeq49_HP.fasta
32,964 sequences; 18,297,164 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001805.3| dipeptidyl peptidase 1 isoform a preproprotein ... 839 0.0
Alignment gi|NP_001107645.1| dipeptidyl peptidase 1 isoform c precursor [... 163 5e-40
Alignment gi|NP_680475.1| dipeptidyl peptidase 1 isoform b precursor [Hom... 163 5e-40
Alignment gi|NP_004381.2| pro-cathepsin H preproprotein [Homo sapiens]. 145 1e-34
Alignment gi|NP_055279.3| tubulointerstitial nephritis antigen [Homo sapi... 135 1e-31
Alignment gi|NP_680093.1| cathepsin B preproprotein [Homo sapiens]. 129 8e-30
Alignment gi|NP_680092.1| cathepsin B preproprotein [Homo sapiens]. 129 8e-30
Alignment gi|NP_680091.1| cathepsin B preproprotein [Homo sapiens]. 129 8e-30
Alignment gi|NP_680090.1| cathepsin B preproprotein [Homo sapiens]. 129 8e-30
Alignment gi|NP_001899.1| cathepsin B preproprotein [Homo sapiens]. 129 8e-30
>ref|NP_001805.3| dipeptidyl peptidase 1 isoform a preproprotein [Homo sapiens].
Length = 463
Score = 839 bits (2167), Expect = 0.0
Identities = 387/444 (87%), Positives = 411/444 (92%)
Frame = +2
Query: 173 GTAHCDTPANCTYPDLLGTWIFHVGPGGSQRDVNCSVMGPPEKKVVVHLKKLDTAYDDFG 352
G CDTPANCTY DLLGTW+F VG GSQRDVNCSVMGP EKKVVV+L+KLDTAYDD G
Sbjct: 20 GAVRCDTPANCTYLDLLGTWVFQVGSSGSQRDVNCSVMGPQEKKVVVYLQKLDTAYDDLG 79
Query: 353 NSGRFTIIYNQGFEIVLNDYKWFAFFKYKEEGRKVTSYCNETMTGWVHDVLGRNWACFTG 532
NSG FTIIYNQGFEIVLNDYKWFAFFKYKEEG KVT+YCNETMTGWVHDVLGRNWACFTG
Sbjct: 80 NSGHFTIIYNQGFEIVLNDYKWFAFFKYKEEGSKVTTYCNETMTGWVHDVLGRNWACFTG 139
Query: 533 EKAGNTFEKVNVNTAHLKSRQKKYSNRLYKYNHDFVKAINGIQKSWTATAYMEYETLTLK 712
+K G E V VNTAHLK+ Q+KYSNRLYKY+H+FVKAIN IQKSWTAT YMEYETLTL
Sbjct: 140 KKVGTASENVYVNTAHLKNSQEKYSNRLYKYDHNFVKAINAIQKSWTATTYMEYETLTLG 199
Query: 713 EMTQRGGGYNQRLPRPKPAPITAEIQEKSLHLPASWDWRNVRGTNFVTPVRNQASCGSCY 892
+M +R GG+++++PRPKPAP+TAEIQ+K LHLP SWDWRNV G NFV+PVRNQASCGSCY
Sbjct: 200 DMIRRSGGHSRKIPRPKPAPLTAEIQQKILHLPTSWDWRNVHGINFVSPVRNQASCGSCY 259
Query: 893 SFASMGMMEARIRILTNNTQTPILSPQEVVSCSQYAQGCAGGFPYLIAGKYAQDFGLVEE 1072
SFASMGM+EARIRILTNN+QTPILSPQEVVSCSQYAQGC GGFPYLIAGKYAQDFGLVEE
Sbjct: 260 SFASMGMLEARIRILTNNSQTPILSPQEVVSCSQYAQGCEGGFPYLIAGKYAQDFGLVEE 319
Query: 1073 ACFPYTGTDSPCTVKEGCFRYYSSEYHYVGGFYGGCNEALMKLELVHHGPMAVAFEVYDD 1252
ACFPYTGTDSPC +KE CFRYYSSEYHYVGGFYGGCNEALMKLELVHHGPMAVAFEVYDD
Sbjct: 320 ACFPYTGTDSPCKMKEDCFRYYSSEYHYVGGFYGGCNEALMKLELVHHGPMAVAFEVYDD 379
Query: 1253 FLHYRKGIYHHTGLRDPFNPFELTNHAVLLVGYGTDLASGMDYWIVKNSWGTSWGEDGYF 1432
FLHY+KGIYHHTGLRDPFNPFELTNHAVLLVGYGTD ASGMDYWIVKNSWGT WGE+GYF
Sbjct: 380 FLHYKKGIYHHTGLRDPFNPFELTNHAVLLVGYGTDSASGMDYWIVKNSWGTGWGENGYF 439
Query: 1433 RIPRGTDECAIESIAVAATPIPKL 1504
RI RGTDECAIESIAVAATPIPKL
Sbjct: 440 RIRRGTDECAIESIAVAATPIPKL 463
>ref|NP_001107645.1| dipeptidyl peptidase 1 isoform c precursor [Homo sapiens].
Length = 141
Score = 163 bits (412), Expect = 5e-40
Identities = 74/87 (85%), Positives = 77/87 (88%)
Frame = +2
Query: 173 GTAHCDTPANCTYPDLLGTWIFHVGPGGSQRDVNCSVMGPPEKKVVVHLKKLDTAYDDFG 352
G CDTPANCTY DLLGTW+F VG GSQRDVNCSVMGP EKKVVV+L+KLDTAYDD G
Sbjct: 20 GAVRCDTPANCTYLDLLGTWVFQVGSSGSQRDVNCSVMGPQEKKVVVYLQKLDTAYDDLG 79
Query: 353 NSGRFTIIYNQGFEIVLNDYKWFAFFK 433
NSG FTIIYNQGFEIVLNDYKWFAFFK
Sbjct: 80 NSGHFTIIYNQGFEIVLNDYKWFAFFK 106
>ref|NP_680475.1| dipeptidyl peptidase 1 isoform b precursor [Homo sapiens].
Length = 137
Score = 163 bits (412), Expect = 5e-40
Identities = 74/87 (85%), Positives = 77/87 (88%)
Frame = +2
Query: 173 GTAHCDTPANCTYPDLLGTWIFHVGPGGSQRDVNCSVMGPPEKKVVVHLKKLDTAYDDFG 352
G CDTPANCTY DLLGTW+F VG GSQRDVNCSVMGP EKKVVV+L+KLDTAYDD G
Sbjct: 20 GAVRCDTPANCTYLDLLGTWVFQVGSSGSQRDVNCSVMGPQEKKVVVYLQKLDTAYDDLG 79
Query: 353 NSGRFTIIYNQGFEIVLNDYKWFAFFK 433
NSG FTIIYNQGFEIVLNDYKWFAFFK
Sbjct: 80 NSGHFTIIYNQGFEIVLNDYKWFAFFK 106
>ref|NP_004381.2| pro-cathepsin H preproprotein [Homo sapiens].
Length = 335
Score = 145 bits (365), Expect = 1e-34
Identities = 89/232 (38%), Positives = 126/232 (54%), Gaps = 2/232 (0%)
Frame = +2
Query: 809 PASWDWRNVRGTNFVTPVRNQASCGSCYSFASMGMMEARIRILTNNTQTPILSPQEVVSC 988
P S DWR + NFV+PV+NQ +CGSC++F++ G +E+ I I T + L+ Q++V C
Sbjct: 117 PPSVDWR--KKGNFVSPVKNQGACGSCWTFSTTGALESAIAIATGKMLS--LAEQQLVDC 172
Query: 989 SQ--YAQGCAGGFPYLIAGKYAQDFGLVEEACFPYTGTDSPCTVKEGCFRYYSSEYHYVG 1162
+Q GC GG P + G++ E +PY G D C + G + + +
Sbjct: 173 AQDFNNHGCQGGLPSQAFEYILYNKGIMGEDTYPYQGKDGYCKFQPGKAIGFVKDVANIT 232
Query: 1163 GFYGGCNEALMKLELVHHGPMAVAFEVYDDFLHYRKGIYHHTGLRDPFNPFELTNHAVLL 1342
+ +E M + + P++ AFEV DF+ YR GIY T P + NHAVL
Sbjct: 233 IY----DEEAMVEAVALYNPVSFAFEVTQDFMMYRTGIYSSTSCHK--TP-DKVNHAVLA 285
Query: 1343 VGYGTDLASGMDYWIVKNSWGTSWGEDGYFRIPRGTDECAIESIAVAATPIP 1498
VGYG +G+ YWIVKNSWG WG +GYF I RG + C + A A+ PIP
Sbjct: 286 VGYGEK--NGIPYWIVKNSWGPQWGMNGYFLIERGKNMCGL--AACASYPIP 333
>ref|NP_055279.3| tubulointerstitial nephritis antigen [Homo sapiens].
Length = 476
Score = 135 bits (339), Expect = 1e-31
Identities = 108/377 (28%), Positives = 171/377 (45%), Gaps = 35/377 (9%)
Frame = +2
Query: 461 SYCNETMTGWVHDVLGRNWACFTGEKAGNTFE-----KVNVNTAHLKSRQKKYSNRLYKY 625
S+C E H CF K G +E K N N+ +Q K S +
Sbjct: 100 SFCREEKEWPPHTQPWYPEGCF---KDGQHYEEGSVIKENCNSCTCSGQQWKCSQHVCLV 156
Query: 626 NHDFVKAINGIQKSWTATAYMEYETLTLKEMTQRGGGYNQRLPRPKPAPITAEIQEKSLH 805
+ ++ +N WTA Y ++ +TL++ G+ RL P+P+ + E +
Sbjct: 157 RSELIEQVNKGDYGWTAQNYSQFWGMTLED------GFKFRLGTLPPSPMLLSMNEMTAS 210
Query: 806 LPASWDWRNVRGTNFVTP-----VRNQASCGSCYSFASMGMMEARIRILTNNTQTPILSP 970
LPA+ D ++ P +Q +C + ++F++ + RI I + T LSP
Sbjct: 211 LPATTDLPEFFVASYKWPGWTHGPLDQKNCAASWAFSTASVAADRIAIQSKGRYTANLSP 270
Query: 971 QEVVSC-SQYAQGCAGGFPYLIAGKYAQDFGLVEEACFPY----TGTDSPCTV---KEGC 1126
Q ++SC ++ GC G A Y + GLV AC+P T++ C + +G
Sbjct: 271 QNLISCCAKNRHGCNSG-SIDRAWWYLRKRGLVSHACYPLFKDQNATNNGCAMASRSDGR 329
Query: 1127 FRYYSSE------------YHYVGGFYGGCNEALMKLELVHHGPMAVAFEVYDDFLHYRK 1270
+ ++++ Y + NE + E++ +GP+ +V +DF HY+
Sbjct: 330 GKRHATKPCPNNVEKSNRIYQCSPPYRVSSNETEIMKEIMQNGPVQAIMQVREDFFHYKT 389
Query: 1271 GIYHH-TGLRDPFNPF-ELTNHAVLLVGYGTDL-ASGMD--YWIVKNSWGTSWGEDGYFR 1435
GIY H T + +L HAV L G+GT A G +WI NSWG SWGE+GYFR
Sbjct: 390 GIYRHVTSTNKESEKYRKLQTHAVKLTGWGTLRGAQGQKEKFWIAANSWGKSWGENGYFR 449
Query: 1436 IPRGTDECAIESIAVAA 1486
I RG +E IE + +AA
Sbjct: 450 ILRGVNESDIEKLIIAA 466
>ref|NP_680093.1| cathepsin B preproprotein [Homo sapiens].
Length = 339
Score = 129 bits (324), Expect = 8e-30
Identities = 92/280 (32%), Positives = 135/280 (48%), Gaps = 37/280 (13%)
Frame = +2
Query: 764 PAPITAEIQEKSLHLPASWDWRNV-RGTNFVTPVRNQASCGSCYSFASMGMMEARIRILT 940
P P + + L LPAS+D R + +R+Q SCGSC++F ++ + RI I T
Sbjct: 66 PKPPQRVMFTEDLKLPASFDAREQWPQCPTIKEIRDQGSCGSCWAFGAVEAISDRICIHT 125
Query: 941 NNTQTPILSPQEVVSC--SQYAQGCAGGFPY----------LIAGKYAQDFGLVEE--AC 1078
N + +S +++++C S GC GG+P L++G GL E C
Sbjct: 126 NAHVSVEVSAEDLLTCCGSMCGDGCNGGYPAEAWNFWTRKGLVSG------GLYESHVGC 179
Query: 1079 FPYT---------GTDSPCT-----------VKEGCFRYYSSEYHYVGGFYGGCN-EALM 1195
PY+ G+ PCT + G Y + HY Y N E +
Sbjct: 180 RPYSIPPCEHHVNGSRPPCTGEGDTPKCSKICEPGYSPTYKQDKHYGYNSYSVSNSEKDI 239
Query: 1196 KLELVHHGPMAVAFEVYDDFLHYRKGIYHH-TGLRDPFNPFELTNHAVLLVGYGTDLASG 1372
E+ +GP+ AF VY DFL Y+ G+Y H TG + HA+ ++G+G + +G
Sbjct: 240 MAEIYKNGPVEGAFSVYSDFLLYKSGVYQHVTGEM-------MGGHAIRILGWGVE--NG 290
Query: 1373 MDYWIVKNSWGTSWGEDGYFRIPRGTDECAIESIAVAATP 1492
YW+V NSW T WG++G+F+I RG D C IES VA P
Sbjct: 291 TPYWLVANSWNTDWGDNGFFKILRGQDHCGIESEVVAGIP 330
>ref|NP_680092.1| cathepsin B preproprotein [Homo sapiens].
Length = 339
Score = 129 bits (324), Expect = 8e-30
Identities = 92/280 (32%), Positives = 135/280 (48%), Gaps = 37/280 (13%)
Frame = +2
Query: 764 PAPITAEIQEKSLHLPASWDWRNV-RGTNFVTPVRNQASCGSCYSFASMGMMEARIRILT 940
P P + + L LPAS+D R + +R+Q SCGSC++F ++ + RI I T
Sbjct: 66 PKPPQRVMFTEDLKLPASFDAREQWPQCPTIKEIRDQGSCGSCWAFGAVEAISDRICIHT 125
Query: 941 NNTQTPILSPQEVVSC--SQYAQGCAGGFPY----------LIAGKYAQDFGLVEE--AC 1078
N + +S +++++C S GC GG+P L++G GL E C
Sbjct: 126 NAHVSVEVSAEDLLTCCGSMCGDGCNGGYPAEAWNFWTRKGLVSG------GLYESHVGC 179
Query: 1079 FPYT---------GTDSPCT-----------VKEGCFRYYSSEYHYVGGFYGGCN-EALM 1195
PY+ G+ PCT + G Y + HY Y N E +
Sbjct: 180 RPYSIPPCEHHVNGSRPPCTGEGDTPKCSKICEPGYSPTYKQDKHYGYNSYSVSNSEKDI 239
Query: 1196 KLELVHHGPMAVAFEVYDDFLHYRKGIYHH-TGLRDPFNPFELTNHAVLLVGYGTDLASG 1372
E+ +GP+ AF VY DFL Y+ G+Y H TG + HA+ ++G+G + +G
Sbjct: 240 MAEIYKNGPVEGAFSVYSDFLLYKSGVYQHVTGEM-------MGGHAIRILGWGVE--NG 290
Query: 1373 MDYWIVKNSWGTSWGEDGYFRIPRGTDECAIESIAVAATP 1492
YW+V NSW T WG++G+F+I RG D C IES VA P
Sbjct: 291 TPYWLVANSWNTDWGDNGFFKILRGQDHCGIESEVVAGIP 330
>ref|NP_680091.1| cathepsin B preproprotein [Homo sapiens].
Length = 339
Score = 129 bits (324), Expect = 8e-30
Identities = 92/280 (32%), Positives = 135/280 (48%), Gaps = 37/280 (13%)
Frame = +2
Query: 764 PAPITAEIQEKSLHLPASWDWRNV-RGTNFVTPVRNQASCGSCYSFASMGMMEARIRILT 940
P P + + L LPAS+D R + +R+Q SCGSC++F ++ + RI I T
Sbjct: 66 PKPPQRVMFTEDLKLPASFDAREQWPQCPTIKEIRDQGSCGSCWAFGAVEAISDRICIHT 125
Query: 941 NNTQTPILSPQEVVSC--SQYAQGCAGGFPY----------LIAGKYAQDFGLVEE--AC 1078
N + +S +++++C S GC GG+P L++G GL E C
Sbjct: 126 NAHVSVEVSAEDLLTCCGSMCGDGCNGGYPAEAWNFWTRKGLVSG------GLYESHVGC 179
Query: 1079 FPYT---------GTDSPCT-----------VKEGCFRYYSSEYHYVGGFYGGCN-EALM 1195
PY+ G+ PCT + G Y + HY Y N E +
Sbjct: 180 RPYSIPPCEHHVNGSRPPCTGEGDTPKCSKICEPGYSPTYKQDKHYGYNSYSVSNSEKDI 239
Query: 1196 KLELVHHGPMAVAFEVYDDFLHYRKGIYHH-TGLRDPFNPFELTNHAVLLVGYGTDLASG 1372
E+ +GP+ AF VY DFL Y+ G+Y H TG + HA+ ++G+G + +G
Sbjct: 240 MAEIYKNGPVEGAFSVYSDFLLYKSGVYQHVTGEM-------MGGHAIRILGWGVE--NG 290
Query: 1373 MDYWIVKNSWGTSWGEDGYFRIPRGTDECAIESIAVAATP 1492
YW+V NSW T WG++G+F+I RG D C IES VA P
Sbjct: 291 TPYWLVANSWNTDWGDNGFFKILRGQDHCGIESEVVAGIP 330
>ref|NP_680090.1| cathepsin B preproprotein [Homo sapiens].
Length = 339
Score = 129 bits (324), Expect = 8e-30
Identities = 92/280 (32%), Positives = 135/280 (48%), Gaps = 37/280 (13%)
Frame = +2
Query: 764 PAPITAEIQEKSLHLPASWDWRNV-RGTNFVTPVRNQASCGSCYSFASMGMMEARIRILT 940
P P + + L LPAS+D R + +R+Q SCGSC++F ++ + RI I T
Sbjct: 66 PKPPQRVMFTEDLKLPASFDAREQWPQCPTIKEIRDQGSCGSCWAFGAVEAISDRICIHT 125
Query: 941 NNTQTPILSPQEVVSC--SQYAQGCAGGFPY----------LIAGKYAQDFGLVEE--AC 1078
N + +S +++++C S GC GG+P L++G GL E C
Sbjct: 126 NAHVSVEVSAEDLLTCCGSMCGDGCNGGYPAEAWNFWTRKGLVSG------GLYESHVGC 179
Query: 1079 FPYT---------GTDSPCT-----------VKEGCFRYYSSEYHYVGGFYGGCN-EALM 1195
PY+ G+ PCT + G Y + HY Y N E +
Sbjct: 180 RPYSIPPCEHHVNGSRPPCTGEGDTPKCSKICEPGYSPTYKQDKHYGYNSYSVSNSEKDI 239
Query: 1196 KLELVHHGPMAVAFEVYDDFLHYRKGIYHH-TGLRDPFNPFELTNHAVLLVGYGTDLASG 1372
E+ +GP+ AF VY DFL Y+ G+Y H TG + HA+ ++G+G + +G
Sbjct: 240 MAEIYKNGPVEGAFSVYSDFLLYKSGVYQHVTGEM-------MGGHAIRILGWGVE--NG 290
Query: 1373 MDYWIVKNSWGTSWGEDGYFRIPRGTDECAIESIAVAATP 1492
YW+V NSW T WG++G+F+I RG D C IES VA P
Sbjct: 291 TPYWLVANSWNTDWGDNGFFKILRGQDHCGIESEVVAGIP 330
>ref|NP_001899.1| cathepsin B preproprotein [Homo sapiens].
Length = 339
Score = 129 bits (324), Expect = 8e-30
Identities = 92/280 (32%), Positives = 135/280 (48%), Gaps = 37/280 (13%)
Frame = +2
Query: 764 PAPITAEIQEKSLHLPASWDWRNV-RGTNFVTPVRNQASCGSCYSFASMGMMEARIRILT 940
P P + + L LPAS+D R + +R+Q SCGSC++F ++ + RI I T
Sbjct: 66 PKPPQRVMFTEDLKLPASFDAREQWPQCPTIKEIRDQGSCGSCWAFGAVEAISDRICIHT 125
Query: 941 NNTQTPILSPQEVVSC--SQYAQGCAGGFPY----------LIAGKYAQDFGLVEE--AC 1078
N + +S +++++C S GC GG+P L++G GL E C
Sbjct: 126 NAHVSVEVSAEDLLTCCGSMCGDGCNGGYPAEAWNFWTRKGLVSG------GLYESHVGC 179
Query: 1079 FPYT---------GTDSPCT-----------VKEGCFRYYSSEYHYVGGFYGGCN-EALM 1195
PY+ G+ PCT + G Y + HY Y N E +
Sbjct: 180 RPYSIPPCEHHVNGSRPPCTGEGDTPKCSKICEPGYSPTYKQDKHYGYNSYSVSNSEKDI 239
Query: 1196 KLELVHHGPMAVAFEVYDDFLHYRKGIYHH-TGLRDPFNPFELTNHAVLLVGYGTDLASG 1372
E+ +GP+ AF VY DFL Y+ G+Y H TG + HA+ ++G+G + +G
Sbjct: 240 MAEIYKNGPVEGAFSVYSDFLLYKSGVYQHVTGEM-------MGGHAIRILGWGVE--NG 290
Query: 1373 MDYWIVKNSWGTSWGEDGYFRIPRGTDECAIESIAVAATP 1492
YW+V NSW T WG++G+F+I RG D C IES VA P
Sbjct: 291 TPYWLVANSWNTDWGDNGFFKILRGQDHCGIESEVVAGIP 330
Database: RefSeq49_HP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,297,164
Number of sequences in database: 32,964
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 32964
Number of Hits to DB: 62,971,238
Number of extensions: 1651477
Number of successful extensions: 5171
Number of sequences better than 1.0e-05: 24
Number of HSP's gapped: 5109
Number of HSP's successfully gapped: 24
Length of query: 538
Length of database: 18,297,164
Length adjustment: 107
Effective length of query: 431
Effective length of database: 14,770,016
Effective search space: 6365876896
Effective search space used: 6365876896
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to Sscrofa10_2
BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-012940
(1616 letters)
Database: Sscrofa_10.2.fasta
4582 sequences; 2,808,509,378 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Sscrofa_Chr09 1084 0.0
>Sscrofa_Chr09
|| Length = 153670197
Score = 1084 bits (547), Expect = 0.0
Identities = 599/615 (97%), Gaps = 1/615 (0%)
Strand = Plus / Minus
Query: 1003 aggctgtgcaggaggcttcccatacctcatcgcaggaaagtacgcccaagattttgggct 1062
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24082636 aggctgtgcaggaggcttcccatacctcatcgcaggaaagtacgcccaagattttgggct 24082577
Query: 1063 ggtggaagaggcctgcttcccctacacaggcacggattcaccatgcacagtcaaagaagg 1122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24082576 ggtggaagaggcctgcttcccctacacaggcacggattcaccatgcacagtcaaagaagg 24082517
Query: 1123 ctgctttcgttactactcctctgagtaccactatgtgggtggtttctatgggggctgcaa 1182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24082516 ctgctttcgttactactcctctgagtaccactatgtgggtggtttctatgggggctgcaa 24082457
Query: 1183 tgaagccctgatgaagcttgagctggtccatcatgggcccatggcagttgcctttgaggt 1242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24082456 tgaagccctgatgaagcttgagctggtccatcatgggcccatggcagttgcctttgaggt 24082397
Query: 1243 ctatgatgacttcctccactaccgcaaggggatctaccaccacactggtctgagagaccc 1302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24082396 ctatgatgacttcctccactaccgcaaggggatctaccaccacactggtctgagagaccc 24082337
Query: 1303 tttcaacccctttgagttgaccaatcacgctgtcctgctggtgggctatggcactgactt 1362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24082336 tttcaacccctttgagttgaccaatcacgctgtcctgctggtgggctatggcactgactt 24082277
Query: 1363 ggcctctggaatggattactggattgttaaaaacagctggggcactagctggggtgagga 1422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24082276 ggcctctggaatggattactggattgttaaaaacagctggggcactagctggggtgagga 24082217
Query: 1423 tggttacttccggatccccagaggaactgatgagtgtgcaattgaaagcatagcggtggc 1482
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24082216 tggttacttccggatccgcagaggaactgatgagtgtgcaattgaaagcatagcggtggc 24082157
Query: 1483 ggccacacccattcctaaattggagagtgtacctcccagccattcctactgaccacctca 1542
||||||||| |||||||||||| ||||||||||||||||| ||| |||||||||| |||
Sbjct: 24082156 ggccacaccaattcctaaattgtagagtgtacctcccagcatttcatactgaccacatca 24082097
Query: 1543 gtcatcaaacgagactgaatttttc-caaacggtaaacttttacccttaacattttcaaa 1601
|||||||||||||||||| || ||| || || ||| |||||||| ||||||||||||| |
Sbjct: 24082096 gtcatcaaacgagactgagttattcacagactgtagacttttacacttaacattttcaga 24082037
Query: 1602 tttcaaatagattcc 1616
||||| |||||||||
Sbjct: 24082036 tttcagatagattcc 24082022
Score = 569 bits (287), Expect = e-159
Identities = 287/287 (100%)
Strand = Plus / Minus
Query: 2 tccggcccctcggactattttaaggagcgcgcgcgaccgtagtggcctcagcccccagcc 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24116601 tccggcccctcggactattttaaggagcgcgcgcgaccgtagtggcctcagcccccagcc 24116542
Query: 62 tgccacgctccggctcccgctccctcccccacctctcctgtgctcccggccggcatgggt 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24116541 tgccacgctccggctcccgctccctcccccacctctcctgtgctcccggccggcatgggt 24116482
Query: 122 ccccggctgggctcgctgctctctgccctcctgctgcttctttacgtcgcgggcaccgcg 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24116481 ccccggctgggctcgctgctctctgccctcctgctgcttctttacgtcgcgggcaccgcg 24116422
Query: 182 cactgtgacactcctgccaactgcacctatcctgacctgctgggcacctggatcttccac 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24116421 cactgtgacactcctgccaactgcacctatcctgacctgctgggcacctggatcttccac 24116362
Query: 242 gtgggccctggtggttcccagcgcgacgtcaactgctcggttatggg 288
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24116361 gtgggccctggtggttcccagcgcgacgtcaactgctcggttatggg 24116315
Score = 339 bits (171), Expect = 3e-90
Identities = 171/171 (100%)
Strand = Plus / Minus
Query: 432 agtataaagaagagggcagaaaggtaaccagctactgcaatgagaccatgactggctggg 491
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24097309 agtataaagaagagggcagaaaggtaaccagctactgcaatgagaccatgactggctggg 24097250
Query: 492 tgcatgacgtgctgggccggaactgggcttgcttcactggagagaaggcgggaaatacct 551
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24097249 tgcatgacgtgctgggccggaactgggcttgcttcactggagagaaggcgggaaatacct 24097190
Query: 552 ttgaaaaagtgaacgtgaacacagcacaccttaagagtcgccagaaaaagt 602
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24097189 ttgaaaaagtgaacgtgaacacagcacaccttaagagtcgccagaaaaagt 24097139
Score = 311 bits (157), Expect = 7e-82
Identities = 157/157 (100%)
Strand = Plus / Minus
Query: 601 gtattctaataggctctacaaatacaaccatgactttgtgaaagctatcaatggcattca 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24093801 gtattctaataggctctacaaatacaaccatgactttgtgaaagctatcaatggcattca 24093742
Query: 661 gaagtcttggactgccactgcgtacatggaatatgagactcttaccctgaaagagatgac 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24093741 gaagtcttggactgccactgcgtacatggaatatgagactcttaccctgaaagagatgac 24093682
Query: 721 tcagagaggtggtggctacaaccagagactcccacgg 757
|||||||||||||||||||||||||||||||||||||
Sbjct: 24093681 tcagagaggtggtggctacaaccagagactcccacgg 24093645
Score = 268 bits (135), Expect = 9e-69
Identities = 135/135 (100%)
Strand = Plus / Minus
Query: 871 agcatcttgtgggagctgctactcatttgcttctatggggatgatggaagcaagaatccg 930
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24084771 agcatcttgtgggagctgctactcatttgcttctatggggatgatggaagcaagaatccg 24084712
Query: 931 tatactaaccaacaatactcagaccccaatcttgagtcctcaggaggttgtgtcatgcag 990
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24084711 tatactaaccaacaatactcagaccccaatcttgagtcctcaggaggttgtgtcatgcag 24084652
Query: 991 ccagtatgctcaagg 1005
|||||||||||||||
Sbjct: 24084651 ccagtatgctcaagg 24084637
Score = 256 bits (129), Expect = 3e-65
Identities = 129/129 (100%)
Strand = Plus / Minus
Query: 305 gtagtggtgcaccttaagaagttggatacagcatatgatgactttggcaattctggacgt 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24114644 gtagtggtgcaccttaagaagttggatacagcatatgatgactttggcaattctggacgt 24114585
Query: 365 ttcaccatcatttacaatcaaggttttgagattgtgctgaatgactacaagtggtttgcc 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24114584 ttcaccatcatttacaatcaaggttttgagattgtgctgaatgactacaagtggtttgcc 24114525
Query: 425 ttttttaag 433
|||||||||
Sbjct: 24114524 ttttttaag 24114516
Score = 224 bits (113), Expect = 1e-55
Identities = 116/117 (99%)
Strand = Plus / Minus
Query: 756 ggcccaaacctgcaccaataactgctgaaatacaggaaaagagtttgcatttgccagcct 815
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 24090370 ggcccaaacctgcaccaataactgctgaaatacaggaaaagagtttgcatttgccagcat 24090311
Query: 816 cctgggactggaggaatgttcgtggtaccaattttgttactcctgttcgaaaccaag 872
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24090310 cctgggactggaggaatgttcgtggtaccaattttgttactcctgttcgaaaccaag 24090254
Database: Sscrofa_10.2.fasta
Posted date: Nov 16, 2011 10:34 AM
Number of letters in database: 2,808,509,378
Number of sequences in database: 4582
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4582
Number of Hits to DB: 45,214,103
Number of extensions: 314
Number of successful extensions: 314
Number of sequences better than 1.0e-05: 1
Number of HSP's gapped: 313
Number of HSP's successfully gapped: 7
Length of query: 1616
Length of database: 2,808,509,378
Length adjustment: 22
Effective length of query: 1594
Effective length of database: 2,808,408,574
Effective search space: 4476603266956
Effective search space used: 4476603266956
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 18 (36.2 bits)
S2: 30 (60.0 bits)