Search to RefSeqBP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-013077
(1401 letters)
Database: RefSeq49_BP.fasta
33,088 sequences; 17,681,374 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001070477.1| P2Y purinoceptor 14 [Bos taurus]. 352 6e-97
Alignment gi|NP_001091621.1| P2Y purinoceptor 13 [Bos taurus]. 218 8e-57
Alignment gi|NP_001001174.2| P2Y purinoceptor 12 [Bos taurus]. 192 5e-49
Alignment gi|NP_001192380.1| G-protein coupled receptor 87 [Bos taurus]. 175 1e-43
Alignment gi|XP_002685065.1| PREDICTED: G protein-coupled receptor 87-lik... 175 1e-43
Alignment gi|NP_001070470.1| probable G-protein coupled receptor 171 [Bos... 124 3e-28
Alignment gi|NP_001033622.2| proteinase-activated receptor 3 precursor [B... 80 4e-15
Alignment gi|NP_001075939.1| uracil nucleotide/cysteinyl leukotriene rece... 72 2e-13
Alignment gi|NP_776835.1| P2Y purinoceptor 1 [Bos taurus]. 73 5e-13
Alignment gi|NP_001039748.1| proteinase-activated receptor 2 precursor [B... 73 5e-13
>ref|NP_001070477.1| P2Y purinoceptor 14 [Bos taurus].
Length = 337
Score = 352 bits (902), Expect = 6e-97
Identities = 178/270 (65%), Positives = 203/270 (75%)
Frame = +1
Query: 571 MNATTTQAPEESCPQNTLITQKIIPALYFVVFVAGILLNGVSGWIFFYVPSSKSFIVYLK 750
MNAT+ E SCP N LIT++IIP LYFVVFVAGILLNG+SGW+FFYVPSSKSFIVYLK
Sbjct: 1 MNATSVPPAEGSCPSNALITKQIIPMLYFVVFVAGILLNGMSGWVFFYVPSSKSFIVYLK 60
Query: 751 NIVVADFLMSLTFPFKILGDSGLGPWQLNVFVCRVSAVLFYINMYVSIMFFGFIGFDRYY 930
NIV+ADFLMSLTFPFKILGD GLG WQ+ VFVCRVSAVLFYINMYVSI+FFG IGFDRYY
Sbjct: 61 NIVIADFLMSLTFPFKILGDLGLGLWQVKVFVCRVSAVLFYINMYVSIVFFGLIGFDRYY 120
Query: 931 KIVKPLLTSFXXXXXXXXXXXXXXXXXXXXXXXPNMILTNQSVKEGTRIKCVELKNELGR 1110
KIVKPLLTSF PNMILTN++V E TR+KC++LK++LG
Sbjct: 121 KIVKPLLTSFIQSISYSKLLSVLVWSLTLLIALPNMILTNRNVTEATRVKCMDLKSDLGL 180
Query: 1111 NWHKASNYIFVGIFWIVFLSLIIFYTAITRKIFXSHLXAXXXXXXXXXXXXXHIFSIMFV 1290
WHKAS+YIFVGIFWIVFLSLIIFYTAIT+KIF SH + +IFSIMFV
Sbjct: 181 KWHKASSYIFVGIFWIVFLSLIIFYTAITKKIFKSHFKSRKNSVSVKKKSSRNIFSIMFV 240
Query: 1291 FFCLLCTFTHAKIPYTRSQTKAITAASPKK 1380
FF + A+IPYT+SQT+A + K+
Sbjct: 241 FFICFVPYHIARIPYTQSQTEAHYSCQSKQ 270
>ref|NP_001091621.1| P2Y purinoceptor 13 [Bos taurus].
Length = 333
Score = 218 bits (556), Expect = 8e-57
Identities = 110/266 (41%), Positives = 150/266 (56%), Gaps = 2/266 (0%)
Frame = +1
Query: 571 MNATTTQA--PEESCPQNTLITQKIIPALYFVVFVAGILLNGVSGWIFFYVPSSKSFIVY 744
MN T + E CP++ Q + PA+Y +VF GILLN ++ W+F ++PSS +FIVY
Sbjct: 1 MNVTVMKGFNGSERCPRDLKTAQLVFPAIYTIVFFVGILLNSLALWVFIHIPSSSTFIVY 60
Query: 745 LKNIVVADFLMSLTFPFKILGDSGLGPWQLNVFVCRVSAVLFYINMYVSIMFFGFIGFDR 924
LKN +VAD +M+L PFKIL D+ LGPWQL FVCR SAV+FY +MYV I G I FDR
Sbjct: 61 LKNTLVADLIMTLMLPFKILSDARLGPWQLRAFVCRFSAVIFYESMYVGITLLGLIAFDR 120
Query: 925 YYKIVKPLLTSFXXXXXXXXXXXXXXXXXXXXXXXPNMILTNQSVKEGTRIKCVELKNEL 1104
+ KI++P F PNMIL+N+ + KC LK L
Sbjct: 121 FLKIIRPFGKFFVQKPAFAKGVSTLIWLFLFLLSLPNMILSNKEATPSSVKKCASLKGPL 180
Query: 1105 GRNWHKASNYIFVGIFWIVFLSLIIFYTAITRKIFXSHLXAXXXXXXXXXXXXXHIFSIM 1284
G WH+A NYI IFW VF+ +++FYT I +K++ S+ + +F ++
Sbjct: 181 GLKWHEAVNYISQFIFWTVFVLMLLFYTVIAKKVYDSYRKSKSKDSKNNKRLEGKVFVVV 240
Query: 1285 FVFFCLLCTFTHAKIPYTRSQTKAIT 1362
VFF F ++IPYT SQT + T
Sbjct: 241 AVFFVCFAPFHFSRIPYTHSQTNSKT 266
>ref|NP_001001174.2| P2Y purinoceptor 12 [Bos taurus].
Length = 339
Score = 192 bits (489), Expect = 5e-49
Identities = 102/262 (38%), Positives = 143/262 (54%)
Frame = +1
Query: 574 NATTTQAPEESCPQNTLITQKIIPALYFVVFVAGILLNGVSGWIFFYVPSSKSFIVYLKN 753
N T+ C ++ ITQ + P LY V+F G++ N ++ IFF + S +FI++LKN
Sbjct: 3 NLTSVAGNSSQCSRDYKITQVLFPLLYTVLFFVGLITNSLAMRIFFQIRSKSNFIIFLKN 62
Query: 754 IVVADFLMSLTFPFKILGDSGLGPWQLNVFVCRVSAVLFYINMYVSIMFFGFIGFDRYYK 933
V++D LM LTFPFKIL D+ LG L FVC+V++V+FY MY+SI F G I DRY K
Sbjct: 63 TVISDLLMILTFPFKILSDTKLGTGPLRAFVCQVTSVVFYFTMYISISFLGLITIDRYQK 122
Query: 934 IVKPLLTSFXXXXXXXXXXXXXXXXXXXXXXXPNMILTNQSVKEGTRIKCVELKNELGRN 1113
+P T+ PNMILTN+ + T KC LK+E G
Sbjct: 123 TTRPFKTANPNNLLGAKILSVVIWAFMFLISLPNMILTNRRPSDKTVKKCSFLKSEFGLV 182
Query: 1114 WHKASNYIFVGIFWIVFLSLIIFYTAITRKIFXSHLXAXXXXXXXXXXXXXHIFSIMFVF 1293
WH+ NY+ IFWI FL +I+ YT IT++++ S++ +F I+ VF
Sbjct: 183 WHEIVNYVCQVIFWINFLIVIVCYTLITKELYKSYVRTRGAGKVPKKKVNIKVFIIIAVF 242
Query: 1294 FCLLCTFTHAKIPYTRSQTKAI 1359
F F A+IPYT SQT+ +
Sbjct: 243 FICFVPFHFARIPYTLSQTRDV 264
>ref|NP_001192380.1| G-protein coupled receptor 87 [Bos taurus].
Length = 358
Score = 175 bits (443), Expect = 1e-43
Identities = 99/248 (39%), Positives = 131/248 (52%)
Frame = +1
Query: 637 IIPALYFVVFVAGILLNGVSGWIFFYVPSSKSFIVYLKNIVVADFLMSLTFPFKILGDSG 816
++P LY V+FVA ILLNG++ WIFF++ + SFI YLKNIVVAD +M+LTFPF+I+ D+G
Sbjct: 44 VLPGLYLVIFVASILLNGLAVWIFFHIRNKTSFIFYLKNIVVADLIMTLTFPFRIVHDAG 103
Query: 817 LGPWQLNVFVCRVSAVLFYINMYVSIMFFGFIGFDRYYKIVKPLLTSFXXXXXXXXXXXX 996
LGPW +CR S+VLFY NMY SI+F G I DRY K+VKP S
Sbjct: 104 LGPWYFKFILCRYSSVLFYANMYTSIVFLGLISIDRYLKVVKPFGDSRMYSITFTKVLSV 163
Query: 997 XXXXXXXXXXXPNMILTNQSVKEGTRIKCVELKNELGRNWHKASNYIFVGIFWIVFLSLI 1176
PN+ILTN +C +LK+ LG WH A Y+ +F +V + LI
Sbjct: 164 CVWVLMAVLSLPNIILTNVQPTRENIHECTKLKSPLGVKWHNAITYVNSCLFVVVLVILI 223
Query: 1177 IFYTAITRKIFXSHLXAXXXXXXXXXXXXXHIFSIMFVFFCLLCTFTHAKIPYTRSQTKA 1356
Y AI+R I S I ++ VFF + +IP+T S
Sbjct: 224 GCYIAISRYIHKSS-RQFISQSSRKRKHNQSIRVVVAVFFTCFLPYHLCRIPFTFSHLDR 282
Query: 1357 ITAASPKK 1380
+ S K
Sbjct: 283 LLDESAHK 290
>ref|XP_002685065.1| PREDICTED: G protein-coupled receptor 87-like [Bos taurus].
Length = 358
Score = 175 bits (443), Expect =
Animal-Genome cDNA 20110601C-013077
Animal-Genome cDNA 20110601C-013077
Search to RefSeqCP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-013077
(1401 letters)
Database: RefSeq49_CP.fasta
33,336 sequences; 18,874,504 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_542838.2| PREDICTED: similar to P2Y purinoceptor 14 (P2Y1... 356 3e-98
Alignment gi|XP_852662.1| PREDICTED: similar to Probable G-protein couple... 219 7e-57
Alignment gi|NP_001003365.1| P2Y purinoceptor 12 [Canis lupus familiaris]. 192 7e-49
Alignment gi|XP_542839.2| PREDICTED: similar to Probable G-protein couple... 171 1e-42
Alignment gi|XP_542837.1| PREDICTED: similar to G protein-coupled recepto... 125 8e-29
Alignment gi|XP_849866.1| PREDICTED: similar to Proteinase activated rece... 85 2e-16
Alignment gi|NP_001139463.1| proteinase-activated receptor 2 [Canis lupus... 73 6e-13
Alignment gi|NP_001005764.1| P2Y purinoceptor 1 [Canis lupus familiaris]. 71 2e-12
Alignment gi|NP_001180602.1| P2Y purinoceptor 1 [Canis lupus familiaris]. 71 2e-12
Alignment gi|XP_544462.2| PREDICTED: similar to Platelet activating facto... 70 5e-12
>ref|XP_542838.2| PREDICTED: similar to P2Y purinoceptor 14 (P2Y14) (UDP-glucose
receptor) (G-protein coupled receptor 105) [Canis
familiaris].
Length = 340
Score = 356 bits (913), Expect = 3e-98
Identities = 182/263 (69%), Positives = 202/263 (76%), Gaps = 2/263 (0%)
Frame = +1
Query: 574 NATTTQAPEESCPQNTLITQKIIPALYFVVFVAGILLNGVSGWIFFYVPSSKSFIVYLKN 753
N++TTQ PEESC +NT+ITQ+I+P LY VVFVAGILLNGVSGWIFFYVPSSKSFIVYLKN
Sbjct: 3 NSSTTQPPEESCSRNTVITQQIVPVLYLVVFVAGILLNGVSGWIFFYVPSSKSFIVYLKN 62
Query: 754 IVVADFLMSLTFPFKILGDSGLGPWQLNVFVCRVSAVLFYINMYVSIMFFGFIGFDRYYK 933
IVVADFLMSLTFPFKIL DSGLGPW+++VFVCRVSAVLFY+NMYVSI+FFGFI FDRYYK
Sbjct: 63 IVVADFLMSLTFPFKILADSGLGPWRIHVFVCRVSAVLFYVNMYVSIVFFGFISFDRYYK 122
Query: 934 IVKPLLTSFXXXXXXXXXXXXXXXXXXXXXXXPNMILTNQSVK--EGTRIKCVELKNELG 1107
IVKPLLTSF PN+ILTNQ+V + TRIKCV LKNELG
Sbjct: 123 IVKPLLTSFIHSVNYSKLLSVMVWVLMLLLAVPNIILTNQNVSNVKVTRIKCVTLKNELG 182
Query: 1108 RNWHKASNYIFVGIFWIVFLSLIIFYTAITRKIFXSHLXAXXXXXXXXXXXXXHIFSIMF 1287
WHKASNYIFVGIFWIVF LI FYTAITRKIF SHL + +IFSIMF
Sbjct: 183 LKWHKASNYIFVGIFWIVFFLLIFFYTAITRKIFKSHLKSRRNSISVKRKSSRNIFSIMF 242
Query: 1288 VFFCLLCTFTHAKIPYTRSQTKA 1356
VFF + A+IPYT+SQT+A
Sbjct: 1e-43
Identities = 99/248 (39%), Positives = 131/248 (52%)
Frame = +1
Query: 637 IIPALYFVVFVAGILLNGVSGWIFFYVPSSKSFIVYLKNIVVADFLMSLTFPFKILGDSG 816
++P LY V+FVA ILLNG++ WIFF++ + SFI YLKNIVVAD +M+LTFPF+I+ D+G
Sbjct: 44 VLPGLYLVIFVASILLNGLAVWIFFHIRNKTSFIFYLKNIVVADLIMTLTFPFRIVHDAG 103
Query: 817 LGPWQLNVFVCRVSAVLFYINMYVSIMFFGFIGFDRYYKIVKPLLTSFXXXXXXXXXXXX 996
LGPW +CR S+VLFY NMY SI+F G I DRY K+VKP S
Sbjct: 104 LGPWYFKFILCRYSSVLFYANMYTSIVFLGLISIDRYLKVVKPFGDSRMYSITFTKVLSV 163
Query: 997 XXXXXXXXXXXPNMILTNQSVKEGTRIKCVELKNELGRNWHKASNYIFVGIFWIVFLSLI 1176
PN+ILTN +C +LK+ LG WH A Y+ +F +V + LI
Sbjct: 164 CVWVLMAVLSLPNIILTNVQPTRENIHECTKLKSPLGVKWHNAITYVNSCLFVVVLVILI 223
Query: 1177 IFYTAITRKIFXSHLXAXXXXXXXXXXXXXHIFSIMFVFFCLLCTFTHAKIPYTRSQTKA 1356
Y AI+R I S I ++ VFF + +IP+T S
Sbjct: 224 GCYIAISRYIHKSS-RQFISQSSRKRKHNQSIRVVVAVFFTCFLPYHLCRIPFTFSHLDR 282
Query: 1357 ITAASPKK 1380
+ S K
Sbjct: 283 LLDESAHK 290
>ref|NP_001070470.1| probable G-protein coupled receptor 171 [Bos taurus].
Length = 319
Score = 124 bits (310), Expect = 3e-28
Identities = 72/248 (29%), Positives = 122/248 (49%), Gaps = 4/248 (1%)
Frame = +1
Query: 652 YFVVFVAGILLNGVSGWIFFYVPSSKSFI-VYLKNIVVADFLMSLTFPFKILGDSGLGPW 828
+++VF+ GI+ + + W F ++ + +YL N++ ADFL++L P KI D G+ PW
Sbjct: 21 FYLVFLIGIIGSCFATWAFIQKNTNHRCVSIYLINLLTADFLLTLALPVKITVDLGVAPW 80
Query: 829 QLNVFVCRVSAVLFYINMYVSIMFFGFIGFDRYYKIVKPLLTSFXXXXXXXXXXXXXXXX 1008
+L +F C+V+A L YINMY+SI+F F+ DR ++
Sbjct: 81 KLRIFHCQVTACLIYINMYLSIIFLAFVSIDRCLQLTYSCKIYRIQEPGFAKMISAVVWL 140
Query: 1009 XXXXXXXPNMILTNQSVKEGTRIKCVELKNELGRNWHKASNYIFVGIFWIVFLSLIIFYT 1188
PNMI+ + +KE + C+E K+E GRNWH +N+I + IF+ ++I
Sbjct: 141 MVLLIMVPNMIIPIKDIKEKPNVGCMEFKSEFGRNWHLLTNFISIAIFFNFSAIILISNC 200
Query: 1189 AITRKIFXSHLXAXXXXXXXXXXXXXHIFSIMFV---FFCLLCTFTHAKIPYTRSQTKAI 1359
+ R+++ + + SI+ V + + +IPYT SQT+ I
Sbjct: 201 LVIRQLYRN------KDNENYPNVKRALISILLVTTGYIICFVPYHIVRIPYTLSQTEVI 254
Query: 1360 TAASPKKS 1383
+ S + S
Sbjct: 255 SDCSTRIS 262
>ref|NP_001033622.2| proteinase-activated receptor 3 precursor [Bos taurus].
Length = 377
Score = 80.1 bits (196), Expect = 4e-15
Identities = 40/107 (37%), Positives = 59/107 (55%)
Frame = +1
Query: 625 ITQKIIPALYFVVFVAGILLNGVSGWIFFYVPSSKSFIVYLKNIVVADFLMSLTFPFKIL 804
++ K+IPA+Y +VF G+ N V+ W+ F + + I Y N+ +ADFL +T PF+I
Sbjct: 92 LSTKLIPAIYILVFAVGMPANAVTLWMLFRTRTIRMTIFYT-NLAIADFLFCVTLPFRIA 150
Query: 805 GDSGLGPWQLNVFVCRVSAVLFYINMYVSIMFFGFIGFDRYYKIVKP 945
W +CR + V+FY NMY SI+ I +RY IV P
Sbjct: 151 YHLNGNNWVFGEVMCRATTVIFYGNMYCSILLLACISINRYLAIVHP 197
>ref|NP_001075939.1| uracil nucleotide/cysteinyl leukotriene receptor [Bos taurus].
Length = 339
Score = 71.6 bits (174), Expect(2) = 2e-13
Identities = 52/214 (24%), Positives = 91/214 (42%), Gaps = 4/214 (1%)
Frame = +1
Query: 577 ATTTQAPEESCPQNTLITQKIIPALYFVVFVAGILLNGVSGWIFFYVPSSKSFI-VYLKN 753
A ++ AP E C Q T + + + Y + F+ + N ++ W+F S + V+L +
Sbjct: 13 ANSSLAPMEQCGQETPLENVLFASFYLLDFILAFVGNALALWLFIRDHKSGTPANVFLMH 72
Query: 754 IVVADFLMSLTFPFKILGDSGLGPWQLNVFVCRVSAVLFYINMYVSIMFFGFIGFDRYYK 933
+ VAD L P +++ W CR++ LFY+NMY SI F I DR+
Sbjct: 73 LAVADLSCVLVLPTRLVYHFSGSHWPFGEIPCRLTGFLFYLNMYASIYFLTCISADRFLA 132
Query: 934 IVKPLLTSFXXXXXXXXXXXXXXXXXXXXXXXPNMILTNQSVKEGTRIKCVELKNELGRN 1113
IV P+ + P ++++ Q+V+ + C++L E
Sbjct: 133 IVHPVKSLKLRRPLHAHLACAFLWVVVAVAMAP-LLVSPQTVRTNNTVVCLQLYRE---- 187
Query: 243 VFFVCFVPYHTARIPYTQSQTEA 265
>ref|XP_852662.1| PREDICTED: similar to Probable G-protein coupled receptor 86 (P2Y
purinoceptor 13) (P2Y13) [Canis familiaris].
Length = 333
Score = 219 bits (557), Expect = 7e-57
Identities = 109/254 (42%), Positives = 144/254 (56%)
Frame = +1
Query: 601 ESCPQNTLITQKIIPALYFVVFVAGILLNGVSGWIFFYVPSSKSFIVYLKNIVVADFLMS 780
E CP++T I Q + PA+Y VVF GILLN ++ W+F ++PSS +FIVYLKN +VAD +M+
Sbjct: 13 ERCPRDTRIAQLVFPAVYTVVFFTGILLNTLALWVFLHIPSSSTFIVYLKNTLVADLVMT 72
Query: 781 LTFPFKILGDSGLGPWQLNVFVCRVSAVLFYINMYVSIMFFGFIGFDRYYKIVKPLLTSF 960
L PFKIL DS LGPWQL FVCR SAV+FY MYV I+ GFI FDR+ KI++P F
Sbjct: 73 LMLPFKILSDSHLGPWQLRAFVCRFSAVIFYETMYVGIILLGFIAFDRFLKIIRPFGKFF 132
Query: 961 XXXXXXXXXXXXXXXXXXXXXXXPNMILTNQSVKEGTRIKCVELKNELGRNWHKASNYIF 1140
PN+IL+N+ + KC LK LG WH NYI
Sbjct: 133 VQKPVFAKMASALVWLLLFLISLPNIILSNKEATPSSVKKCASLKGPLGLKWHGVVNYIC 192
Query: 1141 VGIFWIVFLSLIIFYTAITRKIFXSHLXAXXXXXXXXXXXXXHIFSIMFVFFCLLCTFTH 1320
IFW VF+ + +FY I +K++ S+ +F ++ VFF F
Sbjct: 193 QFIFWTVFILMFLFYVVIAKKVYDSYRKTRSKDRKHNTKLEGKVFVVVAVFFVCFAPFHF 252
Query: 1321 AKIPYTRSQTKAIT 1362
A++PYT SQT + T
Sbjct: 253 ARVPYTHSQTNSKT 266
>ref|NP_001003365.1| P2Y purinoceptor 12 [Canis lupus familiaris].
Length = 339
Score = 192 bits (488), Expect = 7e-49
Identities = 104/270 (38%), Positives = 146/270 (54%)
Frame = +1
Query: 574 NATTTQAPEESCPQNTLITQKIIPALYFVVFVAGILLNGVSGWIFFYVPSSKSFIVYLKN 753
N T+ C ++ ITQ + P LY V+F G++ N ++ IFF + S +FI++LKN
Sbjct: 3 NLTSVAGNGSLCTRDYKITQVLFPLLYTVLFFVGLITNSLAMRIFFQIRSKSNFIIFLKN 62
Query: 754 IVVADFLMSLTFPFKILGDSGLGPWQLNVFVCRVSAVLFYINMYVSIMFFGFIGFDRYYK 933
V++D LM LTFPFKIL D+ LG L FVC+V++V+FY MY+SI F G I DRY K
Sbjct: 63 TVISDLLMILTFPFKILSDAKLGTGPLRTFVCQVTSVVFYFTMYISISFLGLITIDRYQK 122
Query: 934 IVKPLLTSFXXXXXXXXXXXXXXXXXXXXXXXPNMILTNQSVKEGTRIKCVELKNELGRN 1113
+P TS PNMILTN+ ++ KC LK+E G
Sbjct: 123 TTRPFKTSSPNNLLGAKILSVVIWAFMFLLSLPNMILTNRRPRDKNVKKCSFLKSEFGLV 182
Query: 1114 WHKASNYIFVGIFWIVFLSLIIFYTAITRKIFXSHLXAXXXXXXXXXXXXXHIFSIMFVF 1293
WH+ NYI IFWI FL +I+ YT IT++++ S++ +F I+ VF
Sbjct: 183 WHEIVNYICQVIFWINFLIVIVCYTLITKELYRSYVRTRGVGKVPKKKVNIKVFIIIAVF 242
Query: 1294 FCLLCTFTHAKIPYTRSQTKAITAASPKKS 1383
F F A+IPYT SQT+ + S + +
Sbjct: 243 FICFVPFHFARIPYTLSQTRDVFDCSAENT 272
>ref|XP_542839.2| PREDICTED: similar to Probable G-protein coupled receptor 87 [Canis
familiaris].
Length = 358
Score = 171 bits (434), Expect = 1e-42
Identities = 98/265 (36%), Positives = 137/265 (51%)
Frame = +1
Query: 586 TQAPEESCPQNTLITQKIIPALYFVVFVAGILLNGVSGWIFFYVPSSKSFIVYLKNIVVA 765
+ P ++ N ++P LY ++FVA ILLNG++ WIFF++ + SFI YLKNIVVA
Sbjct: 27 SDGPGKNTTVNNEFDTIVLPVLYLIIFVASILLNGLAVWIFFHIRNKTSFIFYLKNIVVA 86
Query: 766 DFLMSLTFPFKILGDSGLGPWQLNVFVCRVSAVLFYINMYVSIMFFGFIGFDRYYKIVKP 945
D +M+LTFPF+I+ D+G GPW +CR ++VLFY NMY SI+F G I DRY K+VKP
Sbjct: 87 DLIMTLTFPFRIVHDAGFGPWYFKFILCRYTSVLFYANMYTSIVFLGLISIDRYLKVVKP 146
Query: 946 LLTSFXXXXXXXXXXXXXXXXXXXXXXXPNMILTNQSVKEGTRIKCVELKNELGRNWHKA 1125
S PN+ILTN + + C++LK+ LG WH+A
Sbjct: 147 FGDSRMYSVTFTKVLSICVWVIMAVLSLPNIILTNGQLTKENIHDCMKLKSPLGVKWHQA 206
Query: 1126 SNYIFVGIFWIVFLSLIIFYTAITRKIFXSHLXAXXXXXXXXXXXXXHIFSIMFVFFCLL 1305
Y+ +F V + LI Y AI+R I S I ++ VFF
Sbjct: 207 VIYVNSCLFVAVLVILIGCYIAISRYIHKSS-RQFISQSSRKRKHNQSIRVVVAVFFTCF 265
Query: 1306 CTFTHAKIPYTRSQTKAITAASPKK 1380
+ +IP+T S + S K
Sbjct: 266 LPYHLCRIPFTFS1114 WHKASNYIFVGI---FWIVFLSLIIFYTAITRKI 1206
KAS + + F F++ + Y I R +
Sbjct: 188 --KASQHALASLAVAFTFPFVTTVTCYLLIIRSL 219
Score = 23.1 bits (48), Expect(2) = 2e-13
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = +2
Query: 1274 SASCSCFFVCFAPLHMPRS 1330
+A + F +CF P H+ RS
Sbjct: 238 AAVLAIFLICFVPYHVHRS 256
>ref|NP_776835.1| P2Y purinoceptor 1 [Bos taurus].
Length = 373
Score = 73.2 bits (178), Expect = 5e-13
Identities = 54/223 (24%), Positives = 94/223 (42%), Gaps = 7/223 (3%)
Frame = +1
Query: 574 NATTTQAPEESCPQNTLITQK-----IIPALYFVVFVAGILLNGVSGWIF-FYVPSSKSF 735
N+T T + P +T+ +PA+Y +VF+ G L N V+ W+F F++
Sbjct: 27 NSTVTSTAAVASPFKCALTKTGFQFYYLPAVYILVFIIGFLGNSVAIWMFVFHMKPWSGI 86
Query: 736 IVYLKNIVVADFLMSLTFPFKILGDSGLGPWQLNVFVCRVSAVLFYINMYVSIMFFGFIG 915
VY+ N+ +ADFL LT P I W +C++ +F++N+Y SI+F I
Sbjct: 87 SVYMFNLALADFLYVLTLPALIFYYFNKTDWIFGDAMCKLQRFIFHVNLYGSILFLTCIS 146
Query: 916 FDRYYKIVKPLLTSFXXXXXXXXXXXXXXXXXXXXXXXPNMILTNQSVKEGTRIKCVE-L 1092
RY +V PL + P + + +++ I C +
Sbjct: 147 AHRYSGVVYPLKSLGRLKKKNAVYISVLVWLIVVVGISPILFYSGTGIRKNKTITCYDTT 206
Query: 1093 KNELGRNWHKASNYIFVGIFWIVFLSLIIFYTAITRKIFXSHL 1221
+E R++ S V +F + + ++ Y I R + L
Sbjct: 207 SDEYLRSYFIYSMCTTVAMFCVPLVLILGCYGLIVRALIYKDL 249
>ref|NP_001039748.1| proteinase-activated receptor 2 precursor [Bos taurus].
Length = 395
Score = 73.2 bits (178), Expect = 5e-13
Identities = 37/110 (33%), Positives = 58/110 (52%), Gaps = 1/110 (0%)
Frame = +1
Query: 625 ITQKIIPALYFVVFVAGILLNGVSGWIFFYVPSSKS-FIVYLKNIVVADFLMSLTFPFKI 801
+T +P +Y +VFV G+ NG++ W+F + K ++Y+ N+ +AD L FP KI
Sbjct: 71 LTTVFLPVVYTIVFVVGLPSNGMALWVFLFRTKKKHPAVIYMANLALADLLSVTWFPLKI 130
Query: 802 LGDSGLGPWQLNVFVCRVSAVLFYINMYVSIMFFGFIGFDRYYKIVKPLL 951
W +C+V FY NMY SI+F + RY+ IV P++
Sbjct: 131 AYHIHGNNWIYGESLCKVLIGFFYGNMYCSILFMTCLSVQRYWVIVNPMV 180
Database: RefSeq49_BP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 17,681,374
Number of sequences in database: 33,088
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33088
Number of Hits to DB: 47,346,395
Number of extensions: 1150178
Number of successful extensions: 4299
Number of sequences better than 1.0e-05: 76
Number of HSP's gapped: 4190
Number of HSP's successfully gapped: 77
Length of query: 467
Length of database: 17,681,374
Length adjustment: 106
Effective length of query: 361
Effective length of database: 14,174,046
Effective search space: 5116830606
Effective search space used: 5116830606
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
HLDRLLDESAHK 290
>ref|XP_542837.1| PREDICTED: similar to G protein-coupled receptor 171 [Canis
familiaris].
Length = 319
Score = 125 bits (315), Expect = 8e-29
Identities = 70/238 (29%), Positives = 118/238 (49%), Gaps = 1/238 (0%)
Frame = +1
Query: 652 YFVVFVAGILLNGVSGWIFFYVPSSKSFI-VYLKNIVVADFLMSLTFPFKILGDSGLGPW 828
+++VF+ GI+ +G + W F ++ + +YL N++ ADFL++L P KI+ D G+ PW
Sbjct: 21 FYLVFLVGIIGSGFATWAFVQNKTNHRCVSIYLINLLTADFLLTLALPVKIVVDLGVAPW 80
Query: 829 QLNVFVCRVSAVLFYINMYVSIMFFGFIGFDRYYKIVKPLLTSFXXXXXXXXXXXXXXXX 1008
+L +F C+V+A L YINMY+SI+F F+ DR ++
Sbjct: 81 KLKIFHCQVTACLMYINMYLSIIFLAFVSIDRCLQLTYNSKVYRIQEPGFAKMISTVVWL 140
Query: 1009 XXXXXXXPNMILTNQSVKEGTRIKCVELKNELGRNWHKASNYIFVGIFWIVFLSLIIFYT 1188
PNMI+ + +KE + C+E K E GRNWH +N+I V IF + ++I
Sbjct: 141 MVLLIMVPNMIIPIKDIKERPNVGCMEFKKEFGRNWHLLTNFICVAIFLNFSVIILISNC 200
Query: 1189 AITRKIFXSHLXAXXXXXXXXXXXXXHIFSIMFVFFCLLCTFTHAKIPYTRSQTKAIT 1362
+ R+++ + +I + + + +IPYT SQT+ I+
Sbjct: 201 LVIRQLYRN---KDNENYPYVKKALINILLVTTGYIICFVPYHIVRIPYTLSQTEVIS 255
>ref|XP_849866.1| PREDICTED: similar to Proteinase activated receptor 3 precursor
(PAR-3) (Thrombin receptor-like 2) (Coagulation factor
II receptor-like 2) [Canis familiaris].
Length = 379
Score = 84.7 bits (208), Expect = 2e-16
Identities = 49/140 (35%), Positives = 68/140 (48%), Gaps = 14/140 (10%)
Frame = +1
Query: 568 TMNATTT---QAPEESCPQ-----------NTLITQKIIPALYFVVFVAGILLNGVSGWI 705
T TTT + PEES + ++ K+IPA+Y +VFV G+ N V+ W
Sbjct: 60 TEGTTTTIKFKCPEESVSNLQVNNATMGYLRSSLSTKLIPAIYILVFVVGVPANVVTLWR 119
Query: 706 FFYVPSSKSFIVYLKNIVVADFLMSLTFPFKILGDSGLGPWQLNVFVCRVSAVLFYINMY 885
F+ S ++ N+ +ADFL +T PFKI W +CR + V+FY NMY
Sbjct: 120 LFFRTRSICMTIFYTNLAIADFLFCVTLPFKIAYHLNGNNWVFGEVMCRATTVIFYGNMY 179
Query: 886 VSIMFFGFIGFDRYYKIVKP 945
SI+ I RY IV P
Sbjct: 180 CSILLLACISISRYLAIVHP 199
>ref|NP_001139463.1| proteinase-activated receptor 2 [Canis lupus familiaris].
Length = 397
Score = 73.2 bits (178), Expect = 6e-13
Identities = 37/109 (33%), Positives = 58/109 (53%), Gaps = 1/109 (0%)
Frame = +1
Query: 625 ITQKIIPALYFVVFVAGILLNGVSGWIFFYVPSSKS-FIVYLKNIVVADFLMSLTFPFKI 801
+T +P +Y +VF+ G+ NG++ W+F + K +VY+ N+ +AD L + FP KI
Sbjct: 73 LTTVFLPTVYTIVFMVGLPSNGMALWVFLFRTKKKHPAVVYMTNLALADLLSVVWFPLKI 132
Query: 802 LGDSGLGPWQLNVFVCRVSAVLFYINMYVSIMFFGFIGFDRYYKIVKPL 948
W +C+V FY NMY SI+F + RY+ IV P+
Sbjct: 133 AYHIHGNNWVYGEALCKVLIGFFYGNMYCSILFMTCLSVQRYWVIVNPI 181
>ref|NP_001005764.1| P2Y purinoceptor 1 [Canis lupus familiaris].
Length = 373
Score = 71.2 bits (173), Expect = 2e-12
Identities = 55/223 (24%), Positives = 93/223 (41%), Gaps = 7/223 (3%)
Frame = +1
Query: 574 NATTTQAPEESCPQNTLITQK-----IIPALYFVVFVAGILLNGVSGWIFF-YVPSSKSF 735
N+T + A + P +T+ +PA+Y +VFV G L N V+ W+F ++
Sbjct: 27 NSTASAAAAAAAPFTCALTKTGFQFYYLPAVYILVFVTGFLGNSVAIWMFARHMRPWSGI 86
Query: 736 IVYLKNIVVADFLMSLTFPFKILGDSGLGPWQLNVFVCRVSAVLFYINMYVSIMFFGFIG 915
VY+ N+ +ADFL LT P I W L +C++ +F+ N+Y SI+F I
Sbjct: 87 SVYMFNLALADFLYVLTLPALIFYYFNKTDWTLGDAMCKLQRFIFHANLYGSILFLTCIS 146
Query: 916 FDRYYKIVKPLLTSFXXXXXXXXXXXXXXXXXXXXXXXPNMILTNQSVKEGTRIKCVE-L 1092
RY +V PL + P + + V+ + C +
Sbjct: 147 AHRYSGVVYPLRSLGRLQKRTAVHVSLLVWLVVALAISPILFYSGTQVRRNGTVTCYDST 206
Query: 1093 KNELGRNWHKASNYIFVGIFWIVFLSLIIFYTAITRKIFXSHL 1221
+E R++ S V +F + + ++ Y I R + L
Sbjct: 207 SDEYLRSYFVYSMCTTVAMFCVPLVLILGCYGLIVRALIYKDL 249
>ref|NP_001180602.1| P2Y purinoceptor 1 [Canis lupus familiaris].
Length = 373
Score = 71.2 bits (173), Expect = 2e-12
Identities = 55/223 (24%), Positives = 93/223 (41%), Gaps = 7/223 (3%)
Frame = +1
Query: 574 NATTTQAPEESCPQNTLITQK-----IIPALYFVVFVAGILLNGVSGWIFF-YVPSSKSF 735
N+T + A + P +T+ +PA+Y +VFV G L N V+ W+F ++
Sbjct: 27 NSTASAAAAAAAPFTCALTKTGFQFYYLPAVYILVFVTGFLGNSVAIWMFARHMRPWSGI 86
Query: 736 IVYLKNIVVADFLMSLTFPFKILGDSGLGPWQLNVFVCRVSAVLFYINMYVSIMFFGFIG 915
VY+ N+ +ADFL LT P I W L +C++ +F+ N+Y SI+F I
Sbjct: 87 SVYMFNLALADFLYVLTLPALIFYYFNKTDWTLGDAMCKLQRFIFHANLYGSILFLTCIS 146
Query: 916 FDRYYKIVKPLLTSFXXXXXXXXXXXXXXXXXXXXXXXPNMILTNQSVKEGTRIKCVE-L 1092
RY +V PL + P + + V+ + C +
Sbjct: 147 AHRYSGVVYPLRSLGRLQKRTAVHVSLLVWLVVALAISPILFYSGTQVRRNGTVTCYDST 206
Query: 1093 KNELGRNWHKASNYIFVGIFWIVFLSLIIFYTAITRKIFXSHL 1221
+E R++ S V +F + + ++ Y I R + L
Sbjct: 207 SDEYLRSYFVYSMCTTVAMFCVPLVLILGCYGLIVRALIYKDL 249
>ref|XP_544462.2| PREDICTED: similar to Platelet activating factor receptor (PAF-R)
[Canis familiaris].
Length = 343
Score = 70.1 bits (170), Expect = 5e-12
Identities = 32/110 (29%), Positives = 59/110 (53%), Gaps = 3/110 (2%)
Frame = +1
Query: 637 IIPALYFVVFVAGILLNGVSGWIFFYVPSSKSFI---VYLKNIVVADFLMSLTFPFKILG 807
+ P +Y ++FV G++ N W+F + SK +++ N+ +AD L +T P I+
Sbjct: 18 LFPIVYSIIFVLGVVANSYVLWVFACLYPSKKLNEIKIFMVNLTMADLLFLVTLPLWIIY 77
Query: 808 DSGLGPWQLNVFVCRVSAVLFYINMYVSIMFFGFIGFDRYYKIVKPLLTS 957
G W L F+C ++ F+IN Y S+ F I ++R+ + +P+ T+
Sbjct: 78 YHNQGNWILPSFLCNLAGCFFFINTYCSVAFLAVITYNRFQAVTRPIKTA 127
Database: RefSeq49_CP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,874,504
Number of sequences in database: 33,336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33336
Number of Hits to DB: 49,511,255
Number of extensions: 1188612
Number of successful extensions: 3520
Number of sequences better than 1.0e-05: 63
Number of HSP's gapped: 3436
Number of HSP's successfully gapped: 63
Length of query: 467
Length of database: 18,874,504
Length adjustment: 106
Effective length of query: 361
Effective length of database: 15,340,888
Effective search space: 5538060568
Effective search space used: 5538060568
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to RefSeqSP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-013077
(1401 letters)
Database: RefSeq49_SP.fasta
24,897 sequences; 11,343,932 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_003132536.1| PREDICTED: p2Y purinoceptor 14-like [Sus scr... 412 e-115
Alignment gi|XP_003132539.2| PREDICTED: p2Y purinoceptor 13-like [Sus scr... 224 1e-58
Alignment gi|NP_001166989.1| purinergic receptor P2Y12 [Sus scrofa]. 187 1e-47
Alignment gi|XP_003132537.1| PREDICTED: G-protein coupled receptor 87 [Su... 173 2e-43
Alignment gi|XP_003135078.2| PREDICTED: LOW QUALITY PROTEIN: probable G-p... 97 2e-20
Alignment gi|XP_003123759.1| PREDICTED: proteinase-activated receptor 3-l... 85 8e-17
Alignment gi|XP_003123761.1| PREDICTED: proteinase-activated receptor 2-l... 75 1e-13
Alignment gi|XP_001926821.1| PREDICTED: p2Y purinoceptor 1 [Sus scrofa]. 72 6e-13
Alignment gi|XP_003127831.1| PREDICTED: platelet-activating factor recept... 71 2e-12
Alignment gi|XP_003359144.1| PREDICTED: G-protein coupled receptor 109A-l... 69 6e-12
>ref|XP_003132536.1| PREDICTED: p2Y purinoceptor 14-like [Sus scrofa].
Length = 338
Score = 412 bits (1059), Expect = e-115
Identities = 212/270 (78%), Positives = 220/270 (81%)
Frame = +1
Query: 571 MNATTTQAPEESCPQNTLITQKIIPALYFVVFVAGILLNGVSGWIFFYVPSSKSFIVYLK 750
MNATTTQAPEESCPQNTLITQKIIPALYFVVFVAGILLNGVSGWIFFYVPSSKSFIVYLK
Sbjct: 2 MNATTTQAPEESCPQNTLITQKIIPALYFVVFVAGILLNGVSGWIFFYVPSSKSFIVYLK 61
Query: 751 NIVVADFLMSLTFPFKILGDSGLGPWQLNVFVCRVSAVLFYINMYVSIMFFGFIGFDRYY 930
NIVVADFLMSLTFPFKILGDSGLGPWQLNVFVCRVSAVLFYINMYVSI+FFGFIGFDRYY
Sbjct: 62 NIVVADFLMSLTFPFKILGDSGLGPWQLNVFVCRVSAVLFYINMYVSIVFFGFIGFDRYY 121
Query: 931 KIVKPLLTSFXXXXXXXXXXXXXXXXXXXXXXXPNMILTNQSVKEGTRIKCVELKNELGR 1110
KIVKPLLTSF PNMILTNQSV+EGTRIKCVELKNELGR
Sbjct: 122 KIVKPLLTSFVQSVTSSKLLSVLVWSLTLLLAVPNMILTNQSVREGTRIKCVELKNELGR 181
Query: 1111 NWHKASNYIFVGIFWIVFLSLIIFYTAITRKIFXSHLXAXXXXXXXXXXXXXHIFSIMFV 1290
NWHKASNYIFVGIFWIVFLSLIIFYTAITRKIF SHL A +IFSIMFV
Sbjct: 182 NWHKASNYIFVGIFWIVFLSLIIFYTAITRKIFKSHLKARKNSSSVKKKSSRNIFSIMFV 241
Query: 1291 FFCLLCTFTHAKIPYTRSQTKAITAASPKK 1380
FF + A+IPYTRSQT+A + K+
Sbjct: 242 FFVCFVPYHIARIPYTRSQTEAHYSCQSKE 271
>ref|XP_003132539.2| PREDICTED: p2Y purinoceptor 13-like [Sus scrofa].
Length = 480
Score = 224 bits (570), Expect = 1e-58
Identities = 114/266 (42%), Positives = 149/266 (56%), Gaps = 2/266 (0%)
Frame = +1
Query: 571 MNATTTQA--PEESCPQNTLITQKIIPALYFVVFVAGILLNGVSGWIFFYVPSSKSFIVY 744
MNAT + E CP++ Q + PA+Y VF GILLN ++ W+F Y+PSS +FIVY
Sbjct: 148 MNATVVKGFNGSERCPRDMQTAQLVFPAIYTAVFFIGILLNALALWVFIYIPSSSTFIVY 207
Query: 745 LKNIVVADFLMSLTFPFKILGDSGLGPWQLNVFVCRVSAVLFYINMYVSIMFFGFIGFDR 924
LKN +VAD +M+LT PFKIL DS LGPWQL FVCR SAV+FY MYV I+ G I FDR
Sbjct: 208 LKNTLVADLIMTLTLPFKILSDSRLGPWQLRAFVCRFSAVIFYETMYVGIILLGLIAFDR 267
Query: 925 YYKIVKPLLTSFXXXXXXXXXXXXXXXXXXXXXXXPNMILTNQSVKEGTRIKCVELKNEL 1104
+ KI+KP F PNMIL+N+ + KC LK L
Sbjct: 268 FLKIIKPFGKFFVQKPAFARAISSLVWLVLFLISLPNMILSNKEATPSSVKKCASLKGPL 327
Query: 1105 GRNWHKASNYIFVGIFWIVFLSLIIFYTAITRKIFXSHLXAXXXXXXXXXXXXXHIFSIM 1284
G WH+ NYI IFW VF +++FY I +K++ S+ A +F ++
Sbjct: 328 GLKWHEVVNYICQFIFWTVFALMLLFYVVIAKKVYNSYRKAKSKDSKNNKRLEGKVFVVV 387
Query: 1285 FVFFCLLCTFTHAKIPYTRSQTKAIT 1362
VFF F A++PYT+SQT + T
Sbjct: 388 AVFFVCFAPFHFARVPYTQSQTNSKT 413
>ref|NP_001166989.1| purinergic receptor P2Y12 [Sus scrofa].
Length = 338
Score = 187 bits (475), Expect = 1e-47
Identities = 102/270 (37%), Positives = 145/270 (53%)
Frame = +1
Query: 574 NATTTQAPEESCPQNTLITQKIIPALYFVVFVAGILLNGVSGWIFFYVPSSKSFIVYLKN 753
N T+ C ++ ITQ + P LY V+F G++ N ++ IFF + S +FI++LKN
Sbjct: 3 NLTSAPGNGSLCIRDYKITQVLFPLLYTVLFFVGLITNSLAMRIFFQIRSKSNFIIFLKN 62
Query: 754 IVVADFLMSLTFPFKILGDSGLGPWQLNVFVCRVSAVLFYINMYVSIMFFGFIGFDRYYK 933
V++D LM LTFPFKIL D+ LG L FVC+V++V+FY MY+SI F G I DRY K
Sbjct: 63 TVISDLLMILTFPFKILSDAKLGTGPLRAFVCQVTSVIFYFTMYISISFLGLITIDRYQK 122
Query: 934 IVKPLLTSFXXXXXXXXXXXXXXXXXXXXXXXPNMILTNQSVKEGTRIKCVELKNELGRN 1113
+P TS PNMILTN+ + + KC LK+E G
Sbjct: 123 TTRPFKTSNPNNLLGAKILSVVIWAFMFLLSLPNMILTNRRPSDNVK-KCSFLKSEFGLV 181
Query: 1114 WHKASNYIFVGIFWIVFLSLIIFYTAITRKIFXSHLXAXXXXXXXXXXXXXHIFSIMFVF 1293
WH+ NYI IFWI FL +++ YT IT++++ S++ +F I+ VF
Sbjct: 182 WHEIVNYICQVIFWINFLIVVVCYTLITKELYKSYVRTRGVGKVPKKKVNIKVFIIIAVF 241
Query: 1294 FCLLCTFTHAKIPYTRSQTKAITAASPKKS 1383
F A+IPYT SQT+ + S + +
Sbjct: 242 LICFVPFHFARIPYTLSQTRDVFDCSAENT 271
>ref|XP_003132537.1| PREDICTED: G-protein coupled receptor 87 [Sus scrofa].
Length = 358
Score = 173 bits (439), Expect = 2e-43
Identities = 101/268 (37%), Positives = 137/268 (51%)
Frame = +1
Query: 577 ATTTQAPEESCPQNTLITQKIIPALYFVVFVAGILLNGVSGWIFFYVPSSKSFIVYLKNI 756
+ + AP ++ N ++P LY V+FVA ILLNG++ WIFF++ + SFI YLKNI
Sbjct: 24 SNVSDAPGKNATINNEFNTIVLPLLYLVIFVASILLNGLAVWIFFHIRNKTSFIFYLKNI 83
Query: 757 VVADFLMSLTFPFKILGDSGLGPWQLNVFVCRVSAVLFYINMYVSIMFFGFIGFDRYYKI 936
VVAD +M+LTFPF+I+ D+G GPW +CR ++VLFY NMY SI+F G I DRY K+
Sbjct: 84 VVADLIMTLTFPFRIVHDAGFGPWYFKFILCRYTSVLFYANMYTSIVFLGLISIDRYLKV 143
Query: 937 VKPLLTSFXXXXXXXXXXXXXXXXXXXXXXXPNMILTNQSVKEGTRIKCVELKNELGRNW 1116
VKP S PN+ILTN +CV+LK+ LG W
Sbjct: 144 VKPFGDSRMYSVTFTKVLSICVWVLMAVLSLPNIILTNGQPTRENIHECVKLKSPLGVKW 203
Query: 1117 HKASNYIFVGIFWIVFLSLIIFYTAITRKIFXSHLXAXXXXXXXXXXXXXHIFSIMFVFF 1296
H A Y+ +F V + LI Y AI+R I S I ++ VFF
Sbjct: 204 HNAIIYVNSCLFVAVLVILIGCYIAISRYIHKSS-RQFISQSSRKRKHNQSIRVVVAVFF 262
Query: 1297 CLLCTFTHAKIPYTRSQTKAITAASPKK 1380
+ +IP+T S + S K
Sbjct: 263 TCFLPYHLCRIPFTFSHLDRLLDDSAHK 290
>ref|XP_003135078.2| PREDICTED: LOW QUALITY PROTEIN: probable G-protein coupled receptor
34-like [Sus scrofa].
Length = 381
Score = 97.1 bits (240), Expect = 2e-20
Identities = 55/204 (26%), Positives = 97/204 (47%), Gaps = 3/204 (1%)
Frame = +1
Query: 604 SCPQNTLITQKIIPALYFVVFVAGILLNGVSGWIFFYVPSSKSFI-VYLKNIVVADFLMS 780
+C + + ++ Y V+F+ G++ N ++ ++F + ++ I +YL N+ VAD L+
Sbjct: 45 ACSMDETLLSSVLTTFYSVIFIMGLVGNIIALYVFLGIHRKRNSIQIYLLNVAVADLLLI 104
Query: 781 LTFPFKILGDSGLGPWQLNVFVCRVSAVLFYINMYVSIMFFGFIGFDRYYKIVKPLLTSF 960
PF+I+ W L V +C+V LFY+NMY+SI+ GFI DRY KI + +
Sbjct: 105 FCLPFRIMYHINQNKWTLGVILCKVVGTLFYMNMYISIILLGFISLDRYIKINRSIQQRK 164
Query: 961 XXXXXXXXXXXXXXXXXXXXXXXPNMILTNQSVKEG--TRIKCVELKNELGRNWHKASNY 1134
+ILT +K+G C +++ N+
Sbjct: 165 AITTKQSIYVCCAVWIIALAGFLTMIILT---LKKGGHNSTMCFHYRDKHNAKGEAIFNF 221
Query: 1135 IFVGIFWIVFLSLIIFYTAITRKI 1206
I V +FW++FL +I+ Y I + +
Sbjct: 222 ILVVMFWLIFLLIILSYIKIGKNL 245
>ref|XP_003123759.1| PREDICTED: proteinase-activated receptor 3-like [Sus scrofa].
Length = 378
Score = 85.1 bits (209), Expect = 8e-17
Identities = 58/200 (29%), Positives = 88/200 (44%), Gaps = 6/200 (3%)
Frame = +1
Query: 625 ITQKIIPALYFVVFVAGILLNGVSGWIFFYVPSSKSFIVYLKNIVVADFLMSLTFPFKIL 804
++ K+IPA+Y +VF G+ N V+ W+ F+ S ++ N+ +ADFL +T PF+I
Sbjct: 92 LSTKLIPAIYILVFAVGVPANAVTLWMLFFRTRSIRMTIFYTNLAIADFLFCVTLPFRIA 151
Query: 805 GDSGLGPWQLNVFVCRVSAVLFYINMYVSIMFFGFIGFDRYYKIVKPLLTSFXXXXXXXX 984
W +CR + V+FY NMY SI+ I +RY IV P
Sbjct: 152 YHLNGNNWVFGEVMCRATTVIFYGNMYCSILLLACISINRYLAIVHPFTYRGLPKRTYAL 211
Query: 985 XXXXXXXXXXXXXXXPNMILTNQ--SVKEGTRIKCVELKNELGRNWHKASNYIFVGI--- 1149
P IL + V++G C ++ N + Y F+ +
Sbjct: 212 LTCGLVWVTVFLYMLPLFILKQEYYLVQQGI-TTCHDVHNTC-ESSSPFQLYYFISLAFF 269
Query: 1150 -FWIVFLSLIIFYTAITRKI 1206
F I FL +I YTAI R +
Sbjct: 270 GFLIPFLVIIYCYTAIIRTL 289
>ref|XP_003123761.1| PREDICTED: proteinase-activated receptor 2-like [Sus scrofa].
Length = 397
Score = 74.7 bits (182), Expect = 1e-13
Identities = 37/110 (33%), Positives = 59/110 (53%), Gaps = 1/110 (0%)
Frame = +1
Query: 625 ITQKIIPALYFVVFVAGILLNGVSGWIFFYVPSSKS-FIVYLKNIVVADFLMSLTFPFKI 801
+T +P +Y +VFV G+ NG++ W+F + K ++Y+ N+ +AD L + FP KI
Sbjct: 73 LTTVFLPVVYTIVFVVGLPSNGMALWVFLFRTKKKHPAVIYMANLALADLLSVIWFPLKI 132
Query: 802 LGDSGLGPWQLNVFVCRVSAVLFYINMYVSIMFFGFIGFDRYYKIVKPLL 951
W +C+V FY NMY SI+F + RY+ IV P++
Sbjct: 133 AYHIHGNNWVYGESLCKVLIGFFYGNMYCSILFMTCLSVQRYWVIVNPMV 182
>ref|XP_001926821.1| PREDICTED: p2Y purinoceptor 1 [Sus scrofa].
Length = 371
Score = 72.4 bits (176), Expect = 6e-13
Identities = 53/217 (24%), Positives = 91/217 (41%), Gaps = 2/217 (0%)
Frame = +1
Query: 577 ATTTQAPEESCPQNTLITQKIIPALYFVVFVAGILLNGVSGWIF-FYVPSSKSFIVYLKN 753
A+T P + T +PA+Y +VF+ G L N V+ W+F F++ VY+ N
Sbjct: 31 ASTAAVPFKCALTKTGFQFYYLPAVYILVFIIGFLGNSVAIWMFVFHMKPWSGISVYMFN 90
Query: 754 IVVADFLMSLTFPFKILGDSGLGPWQLNVFVCRVSAVLFYINMYVSIMFFGFIGFDRYYK 933
+ +ADFL LT P I W +C++ +F++N+Y SI+F I RY
Sbjct: 91 LALADFLYVLTLPALIFYYFNKTDWIFGDAMCKLQRFIFHVNLYGSILFLTCISAHRYSG 150
Query: 934 IVKPLLTSFXXXXXXXXXXXXXXXXXXXXXXXPNMILTNQSVKEGTRIKCVE-LKNELGR 1110
+V PL + P + + +++ I C + +E R
Sbjct: 151 VVYPLKSLGRLKKKNAVYISVLVWLIVVVAISPILFYSGTGIRKNKTITCYDTTSDEYLR 210
Query: 1111 NWHKASNYIFVGIFWIVFLSLIIFYTAITRKIFXSHL 1221
++ S V +F + + ++ Y I R + L
Sbjct: 211 SYFIYSMCTTVAMFCVPLVLILGCYGLIVRALIYKDL 247
>ref|XP_003127831.1| PREDICTED: platelet-activating factor receptor-like [Sus scrofa].
Length = 352
Score = 70.9 bits (172), Expect = 2e-12
Identities = 35/124 (28%), Positives = 63/124 (50%), Gaps = 3/124 (2%)
Frame = +1
Query: 595 PEESCPQNTLITQKIIPALYFVVFVAGILLNGVSGWIFFYVPSSKSFI---VYLKNIVVA 765
P +S ++ + P Y ++FV G++ N W+F V SK +++ N+ +A
Sbjct: 13 PNDSWRVDSEFRYTLFPIFYSIIFVLGVIANSYVLWVFARVYPSKKLNEIKIFMLNLTMA 72
Query: 766 DFLMSLTFPFKILGDSGLGPWQLNVFVCRVSAVLFYINMYVSIMFFGFIGFDRYYKIVKP 945
D L +T P I+ G W L F+C ++ F+IN Y S+ F I ++R+ + +P
Sbjct: 73 DLLFLVTLPLWIIYYYHEGNWILPKFLCNLAGCFFFINTYCSVSFLAVITYNRFQAVTRP 132
Query: 946 LLTS 957
+ T+
Sbjct: 133 IKTA 136
>ref|XP_003359144.1| PREDICTED: G-protein coupled receptor 109A-like [Sus scrofa].
Length = 363
Score = 68.9 bits (167), Expect = 6e-12
Identities = 36/105 (34%), Positives = 59/105 (56%), Gaps = 1/105 (0%)
Frame = +1
Query: 634 KIIPALYFVVFVAGILLNGVSGWIF-FYVPSSKSFIVYLKNIVVADFLMSLTFPFKILGD 810
K++P + + FV G+L NG++ WIF F++ S KS ++L N+ VADFL+ + PF
Sbjct: 28 KVLPPVVGLEFVFGLLGNGLALWIFCFHLKSWKSSRIFLFNLAVADFLLIICLPFLTDNY 87
Query: 811 SGLGPWQLNVFVCRVSAVLFYINMYVSIMFFGFIGFDRYYKIVKP 945
W+ CR+ + +N SI+F + DRY+++V P
Sbjct: 88 VRKWDWRFGDIPCRIMLFMLAMNRQGSIIFLTVVAVDRYFRVVHP 132
Database: RefSeq49_SP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 11,343,932
Number of sequences in database: 24,897
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 24897
Number of Hits to DB: 30,426,357
Number of extensions: 733755
Number of successful extensions: 2791
Number of sequences better than 1.0e-05: 69
Number of HSP's gapped: 2699
Number of HSP's successfully gapped: 69
Length of query: 467
Length of database: 11,343,932
Length adjustment: 103
Effective length of query: 364
Effective length of database: 8,779,541
Effective search space: 3195752924
Effective search space used: 3195752924
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to RefSeqMP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-013077
(1401 letters)
Database: RefSeq49_MP.fasta
30,036 sequences; 15,617,559 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_573463.1| P2Y purinoceptor 14 [Mus musculus]. 343 2e-94
Alignment gi|NP_001008497.1| P2Y purinoceptor 14 [Mus musculus]. 343 2e-94
Alignment gi|NP_083084.2| P2Y purinoceptor 13 [Mus musculus]. 203 2e-52
Alignment gi|NP_081847.3| P2Y purinoceptor 12 [Mus musculus]. 196 5e-50
Alignment gi|NP_115775.1| G-protein coupled receptor 87 [Mus musculus]. 173 3e-43
Alignment gi|NP_775574.1| probable G-protein coupled receptor 171 [Mus mu... 128 9e-30
Alignment gi|NP_035953.3| probable G-protein coupled receptor 34 [Mus mus... 99 6e-21
Alignment gi|NP_001074680.1| platelet-activating factor receptor [Mus mus... 77 4e-14
Alignment gi|NP_032000.3| proteinase-activated receptor 2 precursor [Mus ... 75 2e-13
Alignment gi|NP_034300.3| proteinase-activated receptor 3 precursor [Mus ... 75 2e-13
>ref|NP_573463.1| P2Y purinoceptor 14 [Mus musculus].
Length = 338
Score = 343 bits (880), Expect = 2e-94
Identities = 169/270 (62%), Positives = 199/270 (73%)
Frame = +1
Query: 574 NATTTQAPEESCPQNTLITQKIIPALYFVVFVAGILLNGVSGWIFFYVPSSKSFIVYLKN 753
N+TTT P + C NTLIT++IIP LY +VF+ G+LLNG+SGWIFFYVPSSKSFI+YLKN
Sbjct: 3 NSTTTDPPNQPCSWNTLITKQIIPVLYGMVFITGLLLNGISGWIFFYVPSSKSFIIYLKN 62
Query: 754 IVVADFLMSLTFPFKILGDSGLGPWQLNVFVCRVSAVLFYINMYVSIMFFGFIGFDRYYK 933
IVVADFLM LTFPFK+LGDSGLGPWQ+NVFVCRVSAV+FY+NMYVSI+FFG I FDRYYK
Sbjct: 63 IVVADFLMGLTFPFKVLGDSGLGPWQVNVFVCRVSAVIFYVNMYVSIVFFGLISFDRYYK 122
Query: 934 IVKPLLTSFXXXXXXXXXXXXXXXXXXXXXXXPNMILTNQSVKEGTRIKCVELKNELGRN 1113
IVKPLLTS PN+ILTNQ VKE T+I+C+ELKNELGR
Sbjct: 123 IVKPLLTSIVQSVNYSKLLSVLVWMLMLLLAVPNIILTNQGVKEVTKIQCMELKNELGRK 182
Query: 1114 WHKASNYIFVGIFWIVFLSLIIFYTAITRKIFXSHLXAXXXXXXXXXXXXXHIFSIMFVF 1293
WHKASNYIFV IFW+VFL LI+FYTAITRKIF SHL + +IFSI+ VF
Sbjct: 183 WHKASNYIFVSIFWVVFLLLIVFYTAITRKIFKSHLKSRKNSTSVKRKSSRNIFSIVLVF 242
Query: 1294 FCLLCTFTHAKIPYTRSQTKAITAASPKKS 1383
+ A+IPYT+SQT+ + K++
Sbjct: 243 VVCFVPYHIARIPYTKSQTEGHYSCRTKET 272
>ref|NP_001008497.1| P2Y purinoceptor 14 [Mus musculus].
Length = 338
Score = 343 bits (880), Expect = 2e-94
Identities = 169/270 (62%), Positives = 199/270 (73%)
Frame = +1
Query: 574 NATTTQAPEESCPQNTLITQKIIPALYFVVFVAGILLNGVSGWIFFYVPSSKSFIVYLKN 753
N+TTT P + C NTLIT++IIP LY +VF+ G+LLNG+SGWIFFYVPSSKSFI+YLKN
Sbjct: 3 NSTTTDPPNQPCSWNTLITKQIIPVLYGMVFITGLLLNGISGWIFFYVPSSKSFIIYLKN 62
Query: 754 IVVADFLMSLTFPFKILGDSGLGPWQLNVFVCRVSAVLFYINMYVSIMFFGFIGFDRYYK 933
IVVADFLM LTFPFK+LGDSGLGPWQ+NVFVCRVSAV+FY+NMYVSI+FFG I FDRYYK
Sbjct: 63 IVVADFLMGLTFPFKVLGDSGLGPWQVNVFVCRVSAVIFYVNMYVSIVFFGLISFDRYYK 122
Query: 934 IVKPLLTSFXXXXXXXXXXXXXXXXXXXXXXXPNMILTNQSVKEGTRIKCVELKNELGRN 1113
IVKPLLTS PN+ILTNQ VKE T+I+C+ELKNELGR
Sbjct: 123 IVKPLLTSIVQSVNYSKLLSVLVWMLMLLLAVPNIILTNQGVKEVTKIQCMELKNELGRK 182
Query: 1114 WHKASNYIFVGIFWIVFLSLIIFYTAITRKIFXSHLXAXXXXXXXXXXXXXHIFSIMFVF 1293
WHKASNYIFV IFW+VFL LI+FYTAITRKIF SHL + +IFSI+ VF
Sbjct: 183 WHKASNYIFVSIFWVVFLLLIVFYTAITRKIFKSHLKSRKNSTSVKRKSSRNIFSIVLVF 242
Query: 1294 FCLLCTFTHAKIPYTRSQTKAITAASPKKS 1383
+ A+IPYT+SQT+ + K++
Sbjct: 243 VVCFVPYHIARIPYTKSQTEGHYSCRTKET 272
>ref|NP_083084.2| P2Y purinoceptor 13 [Mus musculus].
Length = 337
Score = 203 bits (517), Expect = 2e-52
Identities = 108/263 (41%), Positives = 147/263 (55%), Gaps = 2/263 (0%)
Frame = +1
Query: 568 TMNATTTQA--PEESCPQNTLITQKIIPALYFVVFVAGILLNGVSGWIFFYVPSSKSFIV 741
T+N T Q E CP++T +TQ + P LY VVF+AGILLN V+ W+F ++PS+ +FIV
Sbjct: 4 TINTTGMQGFNKSERCPRDTRMTQLLFPVLYTVVFLAGILLNTVALWVFVHIPSNSTFIV 63
Query: 742 YLKNIVVADFLMSLTFPFKILGDSGLGPWQLNVFVCRVSAVLFYINMYVSIMFFGFIGFD 921
YLKN +VAD +M+L PFKIL DS L PWQL FVC +S+V+FY MYV IM G I FD
Sbjct: 64 YLKNTLVADLIMALMLPFKILSDSHLAPWQLRGFVCTLSSVVFYETMYVGIMMLGLIAFD 123
Query: 922 RYYKIVKPLLTSFXXXXXXXXXXXXXXXXXXXXXXXPNMILTNQSVKEGTRIKCVELKNE 1101
R+ KI+ P +F PNMIL ++ + KC LK+
Sbjct: 124 RFLKIIMPFRKTFVKKTAFAKTVSISVWSLMFFISLPNMILNKEATPSSVK-KCASLKSP 182
Query: 1102 LGRNWHKASNYIFVGIFWIVFLSLIIFYTAITRKIFXSHLXAXXXXXXXXXXXXXHIFSI 1281
LG WH+ ++ IFW VF+ +++FY IT+K++ S+ +F +
Sbjct: 183 LGLWWHQVVSHTCQFIFWAVFILMLLFYAVITKKVYNSY-RKFRSKDSRHKRLEVKVFIV 241
Query: 1282 MFVFFCLLCTFTHAKIPYTRSQT 1350
M VFF +IPYT SQT
Sbjct: 242 MAVFFVCFAPLHFVRIPYTYSQT 264
>ref|NP_081847.3| P2Y purinoceptor 12 [Mus musculus].
Length = 347
Score = 196 bits (497), Expect = 5e-50
Identities = 109/274 (39%), Positives = 151/274 (55%), Gaps = 2/274 (0%)
Frame = +1
Query: 568 TMNATTTQAPEES--CPQNTLITQKIIPALYFVVFVAGILLNGVSGWIFFYVPSSKSFIV 741
T +A TT +P S C ++ ITQ + P LY V+F AG++ N ++ IFF + S +FI+
Sbjct: 8 TTSANTTFSPGTSTLCVRDYKITQVLFPLLYTVLFFAGLITNSLAMRIFFQIRSKSNFII 67
Query: 742 YLKNIVVADFLMSLTFPFKILGDSGLGPWQLNVFVCRVSAVLFYINMYVSIMFFGFIGFD 921
+LKN V++D LM LTFPFKIL D+ LG L VC+V++V FY MY+SI F G I D
Sbjct: 68 FLKNTVISDLLMILTFPFKILSDAKLGAGPLRTLVCQVTSVTFYFTMYISISFLGLITID 127
Query: 922 RYYKIVKPLLTSFXXXXXXXXXXXXXXXXXXXXXXXPNMILTNQSVKEGTRIKCVELKNE 1101
RY K +P TS PNMILTN+ K+ KC LK+E
Sbjct: 128 RYLKTTRPFKTSSPSNLLGAKILSVVIWAFMFLISLPNMILTNRRPKDKDVTKCSFLKSE 187
Query: 1102 LGRNWHKASNYIFVGIFWIVFLSLIIFYTAITRKIFXSHLXAXXXXXXXXXXXXXHIFSI 1281
G WH+ NYI IFWI FL +I+ Y+ IT++++ S++ +F I
Sbjct: 188 FGLVWHEIVNYICQVIFWINFLIVIVCYSLITKELYRSYVRTRGSAKVPKKKVNVKVFII 247
Query: 1282 MFVFFCLLCTFTHAKIPYTRSQTKAITAASPKKS 1383
+ VFF F A+IPYT SQT+A+ S + +
Sbjct: 248 IAVFFICFVPFHFARIPYTLSQTRAVFDCSAENT 281
>ref|NP_115775.1| G-protein coupled receptor 87 [Mus musculus].
Length = 359
Score = 173 bits (438), Expect = 3e-43
Identities = 107/276 (38%), Positives = 143/276 (51%), Gaps = 1/276 (0%)
Frame = +1
Query: 556 RSEKTMNATTTQAPEESCPQNTLITQKIIPALYFVVFVAGILLNGVSGWIFFYVPSSKSF 735
++ T N+T+ + S N T I+P LY V+FVA ILLNG++ WIFF++ + SF
Sbjct: 19 QASHTANSTSEGHGKNSTLHNKFDTI-ILPVLYLVIFVASILLNGLAVWIFFHIRNKTSF 77
Query: 736 IVYLKNIVVADFLMSLTFPFKILGDSGLGPWQLNVFVCRVSAVLFYINMYVSIMFFGFIG 915
I YLKNIVVAD +M+LTFPF+I+ D+G GPW +CR ++VLFY NMY SI+F G I
Sbjct: 78 IFYLKNIVVADLIMTLTFPFRIVRDAGFGPWYFEFILCRYTSVLFYANMYTSIVFLGLIS 137
Query: 916 FDRYYKIVKPLLTSFXXXXXXXXXXXXXXXXXXXXXXXPNMILTN-QSVKEGTRIKCVEL 1092
DRY K+VKP S PN+ILTN Q KE C++L
Sbjct: 138 VDRYLKVVKPFGDSRMYSITFTKVLSVCVWVIMAILSLPNIILTNGQPTKENIH-DCMKL 196
Query: 1093 KNELGRNWHKASNYIFVGIFWIVFLSLIIFYTAITRKIFXSHLXAXXXXXXXXXXXXXHI 1272
K+ LG WH A Y+ +F V + LI Y AI+R I S I
Sbjct: 197 KSPLGAKWHMAVTYVDSCLFVAVLVILIGCYIAISRYIHKSS-RQFISQSSRKRKHNQSI 255
Query: 1273 FSIMFVFFCLLCTFTHAKIPYTRSQTKAITAASPKK 1380
++ VFF + +IP+T S + S K
Sbjct: 256 RVVVAVFFTCFLPYHLCRIPFTFSNLDRLLDESAHK 291
>ref|NP_775574.1| probable G-protein coupled receptor 171 [Mus musculus].
Length = 319
Score = 128 bits (322), Expect = 9e-30
Identities = 70/243 (28%), Positives = 120/243 (49%), Gaps = 1/243 (0%)
Frame = +1
Query: 652 YFVVFVAGILLNGVSGWIFFYVPSSKSFI-VYLKNIVVADFLMSLTFPFKILGDSGLGPW 828
+++VF+ GI+ + + W F ++ + +YL N++ ADFL++L P KI+ D G+ PW
Sbjct: 21 FYLVFLIGIIGSCFATWAFIQKTTNHRCVSIYLINLLTADFLLTLALPVKIIVDLGVAPW 80
Query: 829 QLNVFVCRVSAVLFYINMYVSIMFFGFIGFDRYYKIVKPLLTSFXXXXXXXXXXXXXXXX 1008
+L +F C+V+A L YINMY+SI+F F+ DR +++
Sbjct: 81 KLRIFHCQVTACLIYINMYLSIIFLAFVSIDRCLQLIHSCKIYRIQEPGFAKMISAVVWL 140
Query: 1009 XXXXXXXPNMILTNQSVKEGTRIKCVELKNELGRNWHKASNYIFVGIFWIVFLSLIIFYT 1188
PNM++ + +KE + + C+E K E GRNWH +N+I V IF + ++I
Sbjct: 141 MVLLIMVPNMVIPIKDIKEKSNVGCMEFKKEFGRNWHLLTNFICVAIFLNFSVIILISNF 200
Query: 1189 AITRKIFXSHLXAXXXXXXXXXXXXXHIFSIMFVFFCLLCTFTHAKIPYTRSQTKAITAA 1368
R+++ + HI + + + +IPYT SQT+ I+
Sbjct: 201 LAIRQLYRNR---DNTNYPSVKSALLHILLVTASYIICFVPYHAVRIPYTLSQTEVISDC 257
Query: 1369 SPK 1377
S +
Sbjct: 258 STR 260
>ref|NP_035953.3| probable G-protein coupled receptor 34 [Mus musculus].
Length = 375
Score = 99.4 bits (246), Expect = 6e-21
Identities = 56/204 (27%), Positives = 97/204 (47%), Gaps = 3/204 (1%)
Frame = +1
Query: 604 SCPQNTLITQKIIPALYFVVFVAGILLNGVSGWIFFYVPSSKSFI-VYLKNIVVADFLMS 780
SCP + + ++ Y V+F+ G++ N ++ ++F + ++ I +YL N+ VAD L+
Sbjct: 38 SCPMDEKLLSTVLTTFYSVIFLVGLVGNIIALYVFLGIHRKRNSIQIYLLNVAVADLLLI 97
Query: 781 LTFPFKILGDSGLGPWQLNVFVCRVSAVLFYINMYVSIMFFGFIGFDRYYKIVKPLLTSF 960
PF+I+ W L V +C+V LFY+NMY+SI+ GFI DRY KI + +
Sbjct: 98 FCLPFRIMYHINQNKWTLGVILCKVVGTLFYMNMYISIILLGFISLDRYIKINRSIQQRR 157
Query: 961 XXXXXXXXXXXXXXXXXXXXXXXPNMILTNQSVKEG--TRIKCVELKNELGRNWHKASNY 1134
+ILT +K+G C ++ N+
Sbjct: 158 AITTKQSIYVCCIVWTVALAGFLTMIILT---LKKGGHNSTMCFHYRDRHNAKGEAIFNF 214
Query: 1135 IFVGIFWIVFLSLIIFYTAITRKI 1206
+ V +FW++FL +I+ Y I + +
Sbjct: 215 VLVVMFWLIFLLIILSYIKIGKNL 238
>ref|NP_001074680.1| platelet-activating factor receptor [Mus musculus].
Length = 341
Score = 76.6 bits (187), Expect = 4e-14
Identities = 37/110 (33%), Positives = 61/110 (55%), Gaps = 3/110 (2%)
Frame = +1
Query: 637 IIPALYFVVFVAGILLNGVSGWIFFYVPSSKSFI---VYLKNIVVADFLMSLTFPFKILG 807
+ P +Y V+F+ G++ NG W+F + SK +++ N+ +AD L +T P I+
Sbjct: 17 LFPIVYSVIFILGVVANGYVLWVFANLYPSKKLNEIKIFMVNLTMADLLFLITLPLWIVY 76
Query: 808 DSGLGPWQLNVFVCRVSAVLFYINMYVSIMFFGFIGFDRYYKIVKPLLTS 957
G W L F+C V+ LF+IN Y S+ F G I ++RY + P+ T+
Sbjct: 77 YYNEGDWILPNFLCNVAGCLFFINTYCSVAFLGVITYNRYQAVAYPIKTA 126
>ref|NP_032000.3| proteinase-activated receptor 2 precursor [Mus musculus].
Length = 399
Score = 74.7 bits (182), Expect = 2e-13
Identities = 38/109 (34%), Positives = 58/109 (53%), Gaps = 1/109 (0%)
Frame = +1
Query: 625 ITQKIIPALYFVVFVAGILLNGVSGWIFFYVPSSKS-FIVYLKNIVVADFLMSLTFPFKI 801
+T +P +Y +VFV G+ NG++ WIF + K ++Y+ N+ +AD L + FP KI
Sbjct: 75 LTTVFLPVVYIIVFVIGLPSNGMALWIFLFRTKKKHPAVIYMANLALADLLSVIWFPLKI 134
Query: 802 LGDSGLGPWQLNVFVCRVSAVLFYINMYVSIMFFGFIGFDRYYKIVKPL 948
W +C+V FY NMY SI+F + RY+ IV P+
Sbjct: 135 SYHLHGNNWVYGEALCKVLIGFFYGNMYCSILFMTCLSVQRYWVIVNPM 183
>ref|NP_034300.3| proteinase-activated receptor 3 precursor [Mus musculus].
Length = 369
Score = 74.7 bits (182), Expect = 2e-13
Identities = 43/139 (30%), Positives = 67/139 (48%), Gaps = 16/139 (11%)
Frame = +1
Query: 577 ATTTQAPEESCPQNTLIT----------------QKIIPALYFVVFVAGILLNGVSGWIF 708
ATTT E CP++++ T ++IPA+Y ++FV G+ N V+ W
Sbjct: 61 ATTTIKAE--CPEDSISTLHVNNATIGYLRSSLSTQVIPAIYILLFVVGVPANIVTLWKL 118
Query: 709 FYVPSSKSFIVYLKNIVVADFLMSLTFPFKILGDSGLGPWQLNVFVCRVSAVLFYINMYV 888
S S +++ N+ +AD L +T PFKI W CR++ V+FY NMY
Sbjct: 119 SLRTKSISLVIFHTNLAIADLLFCVTLPFKIAYHLNGNNWVFGEVTCRITTVVFYGNMYC 178
Query: 889 SIMFFGFIGFDRYYKIVKP 945
+I+ +G +RY P
Sbjct: 179 AILILTCMGINRYLATAHP 197
Database: RefSeq49_MP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 15,617,559
Number of sequences in database: 30,036
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 30036
Number of Hits to DB: 41,617,660
Number of extensions: 1003102
Number of successful extensions: 3608
Number of sequences better than 1.0e-05: 88
Number of HSP's gapped: 3478
Number of HSP's successfully gapped: 91
Length of query: 467
Length of database: 15,617,559
Length adjustment: 105
Effective length of query: 362
Effective length of database: 12,463,779
Effective search space: 4511887998
Effective search space used: 4511887998
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to RefSeqHP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-013077
(1401 letters)
Database: RefSeq49_HP.fasta
32,964 sequences; 18,297,164 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001074924.1| P2Y purinoceptor 14 [Homo sapiens]. 361 e-100
Alignment gi|NP_055694.3| P2Y purinoceptor 14 [Homo sapiens]. 361 e-100
Alignment gi|NP_795713.2| P2Y purinoceptor 13 [Homo sapiens]. 216 3e-56
Alignment gi|NP_795345.1| P2Y purinoceptor 12 [Homo sapiens]. 195 1e-49
Alignment gi|NP_073625.1| P2Y purinoceptor 12 [Homo sapiens]. 195 1e-49
Alignment gi|NP_076404.3| G-protein coupled receptor 87 [Homo sapiens]. 171 1e-42
Alignment gi|NP_037440.3| probable G-protein coupled receptor 171 [Homo s... 125 9e-29
Alignment gi|NP_001091048.1| probable G-protein coupled receptor 34 [Homo... 99 1e-20
Alignment gi|NP_005291.1| probable G-protein coupled receptor 34 [Homo sa... 99 1e-20
Alignment gi|NP_004092.1| proteinase-activated receptor 3 precursor [Homo... 87 4e-17
>ref|NP_001074924.1| P2Y purinoceptor 14 [Homo sapiens].
Length = 338
Score = 361 bits (927), Expect = e-100
Identities = 180/270 (66%), Positives = 208/270 (77%)
Frame = +1
Query: 571 MNATTTQAPEESCPQNTLITQKIIPALYFVVFVAGILLNGVSGWIFFYVPSSKSFIVYLK 750
+N+T+TQ P+ESC QN LITQ+IIP LY +VF+AGILLNGVSGWIFFYVPSSKSFI+YLK
Sbjct: 2 INSTSTQPPDESCSQNLLITQQIIPVLYCMVFIAGILLNGVSGWIFFYVPSSKSFIIYLK 61
Query: 751 NIVVADFLMSLTFPFKILGDSGLGPWQLNVFVCRVSAVLFYINMYVSIMFFGFIGFDRYY 930
NIV+ADF+MSLTFPFKILGDSGLGPWQLNVFVCRVSAVLFY+NMYVSI+FFG I FDRYY
Sbjct: 62 NIVIADFVMSLTFPFKILGDSGLGPWQLNVFVCRVSAVLFYVNMYVSIVFFGLISFDRYY 121
Query: 931 KIVKPLLTSFXXXXXXXXXXXXXXXXXXXXXXXPNMILTNQSVKEGTRIKCVELKNELGR 1110
KIVKPL TSF PN+ILTNQSV+E T+IKC+ELK+ELGR
Sbjct: 122 KIVKPLWTSFIQSVSYSKLLSVIVWMLMLLLAVPNIILTNQSVREVTQIKCIELKSELGR 181
Query: 1111 NWHKASNYIFVGIFWIVFLSLIIFYTAITRKIFXSHLXAXXXXXXXXXXXXXHIFSIMFV 1290
WHKASNYIFV IFWIVFL LI+FYTAIT+KIF SHL + +IFSI+FV
Sbjct: 182 KWHKASNYIFVAIFWIVFLLLIVFYTAITKKIFKSHLKSSRNSTSVKKKSSRNIFSIVFV 241
Query: 1291 FFCLLCTFTHAKIPYTRSQTKAITAASPKK 1380
FF + A+IPYT+SQT+A + K+
Sbjct: 242 FFVCFVPYHIARIPYTKSQTEAHYSCQSKE 271
>ref|NP_055694.3| P2Y purinoceptor 14 [Homo sapiens].
Length = 338
Score = 361 bits (927), Expect = e-100
Identities = 180/270 (66%), Positives = 208/270 (77%)
Frame = +1
Query: 571 MNATTTQAPEESCPQNTLITQKIIPALYFVVFVAGILLNGVSGWIFFYVPSSKSFIVYLK 750
+N+T+TQ P+ESC QN LITQ+IIP LY +VF+AGILLNGVSGWIFFYVPSSKSFI+YLK
Sbjct: 2 INSTSTQPPDESCSQNLLITQQIIPVLYCMVFIAGILLNGVSGWIFFYVPSSKSFIIYLK 61
Query: 751 NIVVADFLMSLTFPFKILGDSGLGPWQLNVFVCRVSAVLFYINMYVSIMFFGFIGFDRYY 930
NIV+ADF+MSLTFPFKILGDSGLGPWQLNVFVCRVSAVLFY+NMYVSI+FFG I FDRYY
Sbjct: 62 NIVIADFVMSLTFPFKILGDSGLGPWQLNVFVCRVSAVLFYVNMYVSIVFFGLISFDRYY 121
Query: 931 KIVKPLLTSFXXXXXXXXXXXXXXXXXXXXXXXPNMILTNQSVKEGTRIKCVELKNELGR 1110
KIVKPL TSF PN+ILTNQSV+E T+IKC+ELK+ELGR
Sbjct: 122 KIVKPLWTSFIQSVSYSKLLSVIVWMLMLLLAVPNIILTNQSVREVTQIKCIELKSELGR 181
Query: 1111 NWHKASNYIFVGIFWIVFLSLIIFYTAITRKIFXSHLXAXXXXXXXXXXXXXHIFSIMFV 1290
WHKASNYIFV IFWIVFL LI+FYTAIT+KIF SHL + +IFSI+FV
Sbjct: 182 KWHKASNYIFVAIFWIVFLLLIVFYTAITKKIFKSHLKSSRNSTSVKKKSSRNIFSIVFV 241
Query: 1291 FFCLLCTFTHAKIPYTRSQTKAITAASPKK 1380
FF + A+IPYT+SQT+A + K+
Sbjct: 242 FFVCFVPYHIARIPYTKSQTEAHYSCQSKE 271
>ref|NP_795713.2| P2Y purinoceptor 13 [Homo sapiens].
Length = 354
Score = 216 bits (551), Expect = 3e-56
Identities = 109/264 (41%), Positives = 148/264 (56%), Gaps = 2/264 (0%)
Frame = +1
Query: 565 KTMNATTTQA--PEESCPQNTLITQKIIPALYFVVFVAGILLNGVSGWIFFYVPSSKSFI 738
+ MN T Q E CP++T I Q + PALY VVF+ GILLN ++ W+F ++PSS +FI
Sbjct: 20 EAMNTTVMQGFNRSERCPRDTRIVQLVFPALYTVVFLTGILLNTLALWVFVHIPSSSTFI 79
Query: 739 VYLKNIVVADFLMSLTFPFKILGDSGLGPWQLNVFVCRVSAVLFYINMYVSIMFFGFIGF 918
+YLKN +VAD +M+L PFKIL DS L PWQL FVCR S+V+FY MYV I+ G I F
Sbjct: 80 IYLKNTLVADLIMTLMLPFKILSDSHLAPWQLRAFVCRFSSVIFYETMYVGIVLLGLIAF 139
Query: 919 DRYYKIVKPLLTSFXXXXXXXXXXXXXXXXXXXXXXXPNMILTNQSVKEGTRIKCVELKN 1098
DR+ KI++PL F PN IL+N+ + KC LK
Sbjct: 140 DRFLKIIRPLRNIFLKKPVFAKTVSIFIWFFLFFISLPNTILSNKEATPSSVKKCASLKG 199
Query: 1099 ELGRNWHKASNYIFVGIFWIVFLSLIIFYTAITRKIFXSHLXAXXXXXXXXXXXXXHIFS 1278
LG WH+ N I IFW VF+ +++FY I +K++ S+ + +F
Sbjct: 200 PLGLKWHQMVNNICQFIFWTVFILMLVFYVVIAKKVYDSYRKSKSKDRKNNKKLEGKVFV 259
Query: 1279 IMFVFFCLLCTFTHAKIPYTRSQT 1350
++ VFF F A++PYT SQT
Sbjct: 260 VVAVFFVCFAPFHFARVPYTHSQT 283
>ref|NP_795345.1| P2Y purinoceptor 12 [Homo sapiens].
Length = 342
Score = 195 bits (495), Expect = 1e-49
Identities = 104/262 (39%), Positives = 144/262 (54%)
Frame = +1
Query: 574 NATTTQAPEESCPQNTLITQKIIPALYFVVFVAGILLNGVSGWIFFYVPSSKSFIVYLKN 753
N T+ C ++ ITQ + P LY V+F G++ NG++ IFF + S +FI++LKN
Sbjct: 6 NLTSAPGNTSLCTRDYKITQVLFPLLYTVLFFVGLITNGLAMRIFFQIRSKSNFIIFLKN 65
Query: 754 IVVADFLMSLTFPFKILGDSGLGPWQLNVFVCRVSAVLFYINMYVSIMFFGFIGFDRYYK 933
V++D LM LTFPFKIL D+ LG L FVC+V++V+FY MY+SI F G I DRY K
Sbjct: 66 TVISDLLMILTFPFKILSDAKLGTGPLRTFVCQVTSVIFYFTMYISISFLGLITIDRYQK 125
Query: 934 IVKPLLTSFXXXXXXXXXXXXXXXXXXXXXXXPNMILTNQSVKEGTRIKCVELKNELGRN 1113
+P TS PNMILTN+ ++ KC LK+E G
Sbjct: 126 TTRPFKTSNPKNLLGAKILSVVIWAFMFLLSLPNMILTNRQPRDKNVKKCSFLKSEFGLV 185
Query: 1114 WHKASNYIFVGIFWIVFLSLIIFYTAITRKIFXSHLXAXXXXXXXXXXXXXHIFSIMFVF 1293
WH+ NYI IFWI FL +I+ YT IT++++ S++ +F I+ VF
Sbjct: 186 WHEIVNYICQVIFWINFLIVIVCYTLITKELYRSYVRTRGVGKVPRKKVNVKVFIIIAVF 245
Query: 1294 FCLLCTFTHAKIPYTRSQTKAI 1359
F F A+IPYT SQT+ +
Sbjct: 246 FICFVPFHFARIPYTLSQTRDV 267
>ref|NP_073625.1| P2Y purinoceptor 12 [Homo sapiens].
Length = 342
Score = 195 bits (495), Expect = 1e-49
Identities = 104/262 (39%), Positives = 144/262 (54%)
Frame = +1
Query: 574 NATTTQAPEESCPQNTLITQKIIPALYFVVFVAGILLNGVSGWIFFYVPSSKSFIVYLKN 753
N T+ C ++ ITQ + P LY V+F G++ NG++ IFF + S +FI++LKN
Sbjct: 6 NLTSAPGNTSLCTRDYKITQVLFPLLYTVLFFVGLITNGLAMRIFFQIRSKSNFIIFLKN 65
Query: 754 IVVADFLMSLTFPFKILGDSGLGPWQLNVFVCRVSAVLFYINMYVSIMFFGFIGFDRYYK 933
V++D LM LTFPFKIL D+ LG L FVC+V++V+FY MY+SI F G I DRY K
Sbjct: 66 TVISDLLMILTFPFKILSDAKLGTGPLRTFVCQVTSVIFYFTMYISISFLGLITIDRYQK 125
Query: 934 IVKPLLTSFXXXXXXXXXXXXXXXXXXXXXXXPNMILTNQSVKEGTRIKCVELKNELGRN 1113
+P TS PNMILTN+ ++ KC LK+E G
Sbjct: 126 TTRPFKTSNPKNLLGAKILSVVIWAFMFLLSLPNMILTNRQPRDKNVKKCSFLKSEFGLV 185
Query: 1114 WHKASNYIFVGIFWIVFLSLIIFYTAITRKIFXSHLXAXXXXXXXXXXXXXHIFSIMFVF 1293
WH+ NYI IFWI FL +I+ YT IT++++ S++ +F I+ VF
Sbjct: 186 WHEIVNYICQVIFWINFLIVIVCYTLITKELYRSYVRTRGVGKVPRKKVNVKVFIIIAVF 245
Query: 1294 FCLLCTFTHAKIPYTRSQTKAI 1359
F F A+IPYT SQT+ +
Sbjct: 246 FICFVPFHFARIPYTLSQTRDV 267
>ref|NP_076404.3| G-protein coupled receptor 87 [Homo sapiens].
Length = 358
Score = 171 bits (434), Expect = 1e-42
Identities = 97/248 (39%), Positives = 130/248 (52%)
Frame = +1
Query: 637 IIPALYFVVFVAGILLNGVSGWIFFYVPSSKSFIVYLKNIVVADFLMSLTFPFKILGDSG 816
++P LY ++FVA ILLNG++ WIFF++ + SFI YLKNIVVAD +M+LTFPF+I+ D+G
Sbjct: 44 VLPVLYLIIFVASILLNGLAVWIFFHIRNKTSFIFYLKNIVVADLIMTLTFPFRIVHDAG 103
Query: 817 LGPWQLNVFVCRVSAVLFYINMYVSIMFFGFIGFDRYYKIVKPLLTSFXXXXXXXXXXXX 996
GPW +CR ++VLFY NMY SI+F G I DRY K+VKP S
Sbjct: 104 FGPWYFKFILCRYTSVLFYANMYTSIVFLGLISIDRYLKVVKPFGDSRMYSITFTKVLSV 163
Query: 997 XXXXXXXXXXXPNMILTNQSVKEGTRIKCVELKNELGRNWHKASNYIFVGIFWIVFLSLI 1176
PN+ILTN E C +LK+ LG WH A Y+ +F V + LI
Sbjct: 164 CVWVIMAVLSLPNIILTNGQPTEDNIHDCSKLKSPLGVKWHTAVTYVNSCLFVAVLVILI 223
Query: 1177 IFYTAITRKIFXSHLXAXXXXXXXXXXXXXHIFSIMFVFFCLLCTFTHAKIPYTRSQTKA 1356
Y AI+R I S I ++ VFF + +IP+T S
Sbjct: 224 GCYIAISRYIHKSS-RQFISQSSRKRKHNQSIRVVVAVFFTCFLPYHLCRIPFTFSHLDR 282
Query: 1357 ITAASPKK 1380
+ S +K
Sbjct: 283 LLDESAQK 290
>ref|NP_037440.3| probable G-protein coupled receptor 171 [Homo sapiens].
Length = 319
Score = 125 bits (314), Expect = 9e-29
Identities = 71/245 (28%), Positives = 120/245 (48%), Gaps = 1/245 (0%)
Frame = +1
Query: 652 YFVVFVAGILLNGVSGWIFFYVPSSKSFI-VYLKNIVVADFLMSLTFPFKILGDSGLGPW 828
+++VF+ GI+ + + W F ++ + +YL N++ ADFL++L P KI+ D G+ PW
Sbjct: 21 FYLVFLVGIIGSCFATWAFIQKNTNHRCVSIYLINLLTADFLLTLALPVKIVVDLGVAPW 80
Query: 829 QLNVFVCRVSAVLFYINMYVSIMFFGFIGFDRYYKIVKPLLTSFXXXXXXXXXXXXXXXX 1008
+L +F C+V+A L YINMY+SI+F F+ DR ++
Sbjct: 81 KLKIFHCQVTACLIYINMYLSIIFLAFVSIDRCLQLTHSCKIYRIQEPGFAKMISTVVWL 140
Query: 1009 XXXXXXXPNMILTNQSVKEGTRIKCVELKNELGRNWHKASNYIFVGIFWIVFLSLIIFYT 1188
PNM++ + +KE + + C+E K E GRNWH +N+I V IF ++I
Sbjct: 141 MVLLIMVPNMMIPIKDIKEKSNVGCMEFKKEFGRNWHLLTNFICVAIFLNFSAIILISNC 200
Query: 1189 AITRKIFXSHLXAXXXXXXXXXXXXXHIFSIMFVFFCLLCTFTHAKIPYTRSQTKAITAA 1368
+ R+++ + +I + + + +IPYT SQT+ IT
Sbjct: 201 LVIRQLYRN---KDNENYPNVKKALINILLVTTGYIICFVPYHIVRIPYTLSQTEVITDC 257
Query: 1369 SPKKS 1383
S + S
Sbjct: 258 STRIS 262
>ref|NP_001091048.1| probable G-protein coupled receptor 34 [Homo sapiens].
Length = 381
Score = 98.6 bits (244), Expect = 1e-20
Identities = 55/204 (26%), Positives = 98/204 (48%), Gaps = 3/204 (1%)
Frame = +1
Query: 604 SCPQNTLITQKIIPALYFVVFVAGILLNGVSGWIFFYVPSSKSFI-VYLKNIVVADFLMS 780
+CP + + ++ Y V+F+ G++ N ++ ++F + ++ I +YL N+ +AD L+
Sbjct: 45 TCPMDEKLLSTVLTTSYSVIFIVGLVGNIIALYVFLGIHRKRNSIQIYLLNVAIADLLLI 104
Query: 781 LTFPFKILGDSGLGPWQLNVFVCRVSAVLFYINMYVSIMFFGFIGFDRYYKIVKPLLTSF 960
PF+I+ W L V +C+V LFY+NMY+SI+ GFI DRY KI + +
Sbjct: 105 FCLPFRIMYHINQNKWTLGVILCKVVGTLFYMNMYISIILLGFISLDRYIKINRSIQQRK 164
Query: 961 XXXXXXXXXXXXXXXXXXXXXXXPNMILTNQSVKEG--TRIKCVELKNELGRNWHKASNY 1134
+ILT +K+G C +++ N+
Sbjct: 165 AITTKQSIYVCCIVWMLALGGFLTMIILT---LKKGGHNSTMCFHYRDKHNAKGEAIFNF 221
Query: 1135 IFVGIFWIVFLSLIIFYTAITRKI 1206
I V +FW++FL +I+ Y I + +
Sbjct: 222 ILVVMFWLIFLLIILSYIKIGKNL 245
>ref|NP_005291.1| probable G-protein coupled receptor 34 [Homo sapiens].
Length = 381
Score = 98.6 bits (244), Expect = 1e-20
Identities = 55/204 (26%), Positives = 98/204 (48%), Gaps = 3/204 (1%)
Frame = +1
Query: 604 SCPQNTLITQKIIPALYFVVFVAGILLNGVSGWIFFYVPSSKSFI-VYLKNIVVADFLMS 780
+CP + + ++ Y V+F+ G++ N ++ ++F + ++ I +YL N+ +AD L+
Sbjct: 45 TCPMDEKLLSTVLTTSYSVIFIVGLVGNIIALYVFLGIHRKRNSIQIYLLNVAIADLLLI 104
Query: 781 LTFPFKILGDSGLGPWQLNVFVCRVSAVLFYINMYVSIMFFGFIGFDRYYKIVKPLLTSF 960
PF+I+ W L V +C+V LFY+NMY+SI+ GFI DRY KI + +
Sbjct: 105 FCLPFRIMYHINQNKWTLGVILCKVVGTLFYMNMYISIILLGFISLDRYIKINRSIQQRK 164
Query: 961 XXXXXXXXXXXXXXXXXXXXXXXPNMILTNQSVKEG--TRIKCVELKNELGRNWHKASNY 1134
+ILT +K+G C +++ N+
Sbjct: 165 AITTKQSIYVCCIVWMLALGGFLTMIILT---LKKGGHNSTMCFHYRDKHNAKGEAIFNF 221
Query: 1135 IFVGIFWIVFLSLIIFYTAITRKI 1206
I V +FW++FL +I+ Y I + +
Sbjct: 222 ILVVMFWLIFLLIILSYIKIGKNL 245
>ref|NP_004092.1| proteinase-activated receptor 3 precursor [Homo sapiens].
Length = 374
Score = 87.0 bits (214), Expect = 4e-17
Identities = 42/107 (39%), Positives = 60/107 (56%)
Frame = +1
Query: 625 ITQKIIPALYFVVFVAGILLNGVSGWIFFYVPSSKSFIVYLKNIVVADFLMSLTFPFKIL 804
++ K+IPA+Y +VFV G+ N V+ W+ F+ S V+ N+ +ADFL +T PFKI
Sbjct: 92 LSTKLIPAIYLLVFVVGVPANAVTLWMLFFRTRSICTTVFYTNLAIADFLFCVTLPFKIA 151
Query: 805 GDSGLGPWQLNVFVCRVSAVLFYINMYVSIMFFGFIGFDRYYKIVKP 945
W +CR + V+FY NMY SI+ I +RY IV P
Sbjct: 152 YHLNGNNWVFGEVLCRATTVIFYGNMYCSILLLACISINRYLAIVHP 198
Database: RefSeq49_HP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,297,164
Number of sequences in database: 32,964
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 32964
Number of Hits to DB: 48,709,783
Number of extensions: 1178157
Number of successful extensions: 3730
Number of sequences better than 1.0e-05: 112
Number of HSP's gapped: 3569
Number of HSP's successfully gapped: 117
Length of query: 467
Length of database: 18,297,164
Length adjustment: 106
Effective length of query: 361
Effective length of database: 14,802,980
Effective search space: 5343875780
Effective search space used: 5343875780
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to Sscrofa10_2
BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-013077
(1401 letters)
Database: Sscrofa_10.2.fasta
4582 sequences; 2,808,509,378 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Sscrofa_Chr13 1437 0.0
>Sscrofa_Chr13
|| Length = 218635234
Score = 1437 bits (725), Expect = 0.0
Identities = 832/863 (96%), Gaps = 7/863 (0%)
Strand = Plus / Minus
Query: 543 aggtctcgccctcagaagtgagaagacgatgaatgccaccaccacccaggcccccgagga 602
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 99456820 aggtctcgccctcagaagtgagaagatgatgaatgccaccaccacccaggcccccgagga 99456761
Query: 603 gtcctgcccccagaacaccctcatcacccagaaaatcatccccgcgctgtacttcgtggt 662
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 99456760 gtcctgcccccagaacaccctcatcacccagaaaatcatccccgcgctgtacttcgtggt 99456701
Query: 663 cttcgtggctggcatcctactcaatggcgtgtcggggtggatatttttctacgtgcccag 722
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 99456700 cttcgtggctggcatcctactcaatggcgtgtcggggtggatatttttctacgtgcccag 99456641
Query: 723 ctccaagagtttcattgtctatctcaaaaatattgttgttgctgacttcctgatgagcct 782
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 99456640 ctccaagagtttcattgtctatctcaaaaatattgttgttgctgacttcctgatgagcct 99456581
Query: 783 gacttttcccttcaagatcctgggcgactcgggcctcgggccctggcagctgaacgtgtt 842
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 99456580 gacttttcccttcaagatcctgggcgactcgggcctcgggccctggcagctgaacgtgtt 99456521
Query: 843 cgtgtgcagggtctccgccgtgctcttctacatcaacatgtacgtcagcatcatgttctt 902
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 99456520 cgtgtgcagggtctccgccgtgctcttctacatcaacatgtacgtcagcatcgtgttctt 99456461
Query: 903 cgggttcatcggcttcgacaggtattataagatcgtaaagccacttctgacgtcattcgt 962
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 99456460 cgggttcatcggcttcgacaggtattataagatcgtaaagccacttctgacgtcattcgt 99456401
Query: 963 ccagtccgtgacctctagcaaactcctatcggtgctggtgtggagcctcacactgctgtt 1022
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 99456400 ccagtccgtgacctctagcaaactcctatcggtgctggtgtggagcctcacactgctgtt 99456341
Query: 1023 ggccgttcccaacatgatcctgaccaaccagagcgtcaaggagggcacacgcattaagtg 1082
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 99456340 ggccgttcccaacatgatcctgaccaaccagagcgtcagggagggcacacgcattaagtg 99456281
Query: 1083 tgtggaactgaaaaatgaactgggccgcaactggcacaaggcctccaactatatctttgt 1142
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 99456280 tgtggaactgaaaaatgaactgggccgcaactggcacaaggcctccaactatatctttgt 99456221
Query: 1143 aggcatcttctggattgtgtttctttccttaatcatcttctacactgctatcacgaggaa 1202
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 99456220 aggcatcttctggattgtgtttctttccttaatcatcttctacactgctatcacgaggaa 99456161
Query: 1203 gatctttnagtcccaccttnangcccagaagaattccagttcgggttagaagaaaaatc- 1261
||||||| ||||||||||| | ||| |||||||||||||||| | ||||| |||||
Sbjct: 99456160 gatctttaagtcccaccttaaggccagaaagaattccagttcggttaagaag--aaatca 99456103
Query: 1262 agtcgc-atatattcagcatcatgttcgtgnnnnnnngtctgctttgcacctttacaca- 1319
|||||| ||||||||||||||||||||||| |||||||||| ||||| ||||
Sbjct: 99456102 agtcgcaatatattcagcatcatgttcgtg-ttttttgtctgctttgtaccttaccacat 99456044
Query: 1320 tgccaagatcccctacacacggagccaaa-cgaaggccattacagctgccagtccaaaga 1378
||||| |||||||||||||||||||||| ||||| ||||||||||||||||||||||||
Sbjct: 99456043 tgccagaatcccctacacacggagccaaaccgaagcccattacagctgccagtccaaaga 99455984
Query: 1379 aatcctgctctatgtggaagaat 1401
|||||||||||||||| ||||||
Sbjct: 99455983 aatcctgctctatgtgaaagaat 99455961
Score = 704 bits (355), Expect = 0.0
Identities = 413/438 (94%), Gaps = 1/438 (0%)
Strand = Plus / Minus
Query: 1 tgttgaacttggcaatggcaaaatttgaaaagaaaacctactcaggttgttgcctggctg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 99726979 tgttgaacttggcaatggcaaaatttgaaaagaaaacctactcaggttgttgcctggctg 99726920
Query: 61 ttcatttgccgtatgatgtggtggcgtggcggggggaacatagtagaaaatttcaagaag 120
||||||||||||||||||||||| |||||| ||||||||||||||||||||||||| |||
Sbjct: 99726919 ttcatttgccgtatgatgtggtgacgtggcagggggaacatagtagaaaatttcaaaaag 99726860
Query: 121 gnnnnnnnctcacannnnnnnnnnnnnnngatcactgaaggaaaggcactagcacggagg 180
| |||||| |||||||||||||||||||||||||||||||
Sbjct: 99726859 gaaaaaaactcacattttttgttttttt-gatcactgaaggaaaggcactagcacggagg 99726801
Query: 181 ccagcctgatatccacgtagatccaaacatctctctctccctccttgtttccatttccca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 99726800 ccagcctgatatccacgtagatccaaacatctctctctccctccttgtttccatttccca 99726741
Query: 241 accttgagcaatttcaaactgaccaattcagcagtgacagtcaaccttctgtctcgtggt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 99726740 accttgagcaatttcaaactgaccaattcagcagtgacagtcaaccttctgtctcgtggt 99726681
Query: 301 ttctgtcaagttcctgattttcatctgttcttgaagacgagcaagaactgcgtaaggaca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 99726680 ttctgtcaagttcctgattttcatctgttcttgaagacgagcaagaactgcgtaaggaca 99726621
Query: 361 gtcttaatttggagcgtccactgagacatactttgaaataagtgctgtgtgactcgcaga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 99726620 gtcttaatttggagcgtccactgagacatactttgaaataagtgctgtgtgactcgcaga 99726561
Query: 421 cgaaggtctacaaacagg 438
||||||||||||||||||
Sbjct: 99726560 cgaaggtctacaaacagg 99726543
Score = 190 bits (96), Expect = 1e-45
Identities = 96/96 (100%)
Strand = Plus / Minus
Query: 434 acaggatcattggtgaagaaacactttggccatttcaagatgacaagcactcaccgggct 493
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 99459643 acaggatcattggtgaagaaacactttggccatttcaagatgacaagcactcaccgggct 99459584
Query: 494 aaattacttcattgaaaggaaacctcattttagacc 529
||||||||||||||||||||||||||||||||||||
Sbjct: 99459583 aaattacttcattgaaaggaaacctcattttagacc 99459548
Database: Sscrofa_10.2.fasta
Posted date: Nov 16, 2011 10:34 AM
Number of letters in database: 2,808,509,378
Number of sequences in database: 4582
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4582
Number of Hits to DB: 40,268,236
Number of extensions: 253
Number of successful extensions: 253
Number of sequences better than 1.0e-05: 1
Number of HSP's gapped: 251
Number of HSP's successfully gapped: 5
Length of query: 1401
Length of database: 2,808,509,378
Length adjustment: 21
Effective length of query: 1380
Effective length of database: 2,808,413,156
Effective search space: 3875610155280
Effective search space used: 3875610155280
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 18 (36.2 bits)
S2: 30 (60.0 bits)