Animal-Genome cDNA 20110601C-013083

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-013083
         (2602 letters)

Database: RefSeq49_BP.fasta 
           33,088 sequences; 17,681,374 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_001180177.1| alpha-centractin [Bos taurus].                    755   0.0  
Alignment   gi|XP_002698500.1| PREDICTED: ARP1 actin-related protein 1 homo...   755   0.0  
Alignment   gi|NP_001096808.1| beta-centractin [Bos taurus].                     710   0.0  
Alignment   gi|NP_001028790.1| actin, cytoplasmic 2 [Bos taurus].                425   e-118
Alignment   gi|NP_001029757.1| actin, alpha cardiac muscle 1 [Bos taurus].       425   e-118
Alignment   gi|NP_776404.2| actin, cytoplasmic 1 [Bos taurus].                   424   e-118
Alignment   gi|NP_001029674.1| actin, aortic smooth muscle [Bos taurus].         422   e-118
Alignment   gi|NP_001013610.1| actin, gamma-enteric smooth muscle [Bos taur...   422   e-117
Alignment   gi|NP_776650.1| actin, alpha skeletal muscle [Bos taurus].           421   e-117
Alignment   gi|XP_002696363.1| PREDICTED: beta actin-like [Bos taurus].          416   e-116

>ref|NP_001180177.1| alpha-centractin [Bos taurus].
          Length = 376

 Score =  755 bits (1949), Expect = 0.0
 Identities = 376/376 (100%), Positives = 376/376 (100%)
 Frame = +3

Query: 138  MESYDVIANQPVVIDNGSGVIKAGFAGDQIPKYCFPNYVGRPKHVRVMAGALEGDIFIGP 317
            MESYDVIANQPVVIDNGSGVIKAGFAGDQIPKYCFPNYVGRPKHVRVMAGALEGDIFIGP
Sbjct: 1    MESYDVIANQPVVIDNGSGVIKAGFAGDQIPKYCFPNYVGRPKHVRVMAGALEGDIFIGP 60

Query: 318  KAEEHRGLLSIRYPMEHGIVKDWNDMERIWQYVYSKDQLQTFSEEHPVLLTEAPLNPRKN 497
            KAEEHRGLLSIRYPMEHGIVKDWNDMERIWQYVYSKDQLQTFSEEHPVLLTEAPLNPRKN
Sbjct: 61   KAEEHRGLLSIRYPMEHGIVKDWNDMERIWQYVYSKDQLQTFSEEHPVLLTEAPLNPRKN 120

Query: 498  RERAAEVFFETFNVPALFISMQAVLSLYATGRTTGVVLDSGDGVTHAVPIYEGFAMPHSI 677
            RERAAEVFFETFNVPALFISMQAVLSLYATGRTTGVVLDSGDGVTHAVPIYEGFAMPHSI
Sbjct: 121  RERAAEVFFETFNVPALFISMQAVLSLYATGRTTGVVLDSGDGVTHAVPIYEGFAMPHSI 180

Query: 678  MRIDIAGRDVSRFLRLYLRKEGYDFHSSSEFEIVKAIKERACYLSINPQKDETLETEKAQ 857
            MRIDIAGRDVSRFLRLYLRKEGYDFHSSSEFEIVKAIKERACYLSINPQKDETLETEKAQ
Sbjct: 181  MRIDIAGRDVSRFLRLYLRKEGYDFHSSSEFEIVKAIKERACYLSINPQKDETLETEKAQ 240

Query: 858  YYLPDGSTIEIGPSRFRAPELLFRPDLIGEESEGIHEVLVFAIQKSDMDLRRTLFSNIVL 1037
            YYLPDGSTIEIGPSRFRAPELLFRPDLIGEESEGIHEVLVFAIQKSDMDLRRTLFSNIVL
Sbjct: 241  YYLPDGSTIEIGPSRFRAPELLFRPDLIGEESEGIHEVLVFAIQKSDMDLRRTLFSNIVL 300

Query: 1038 SGGSTLFKGFGDRLLSEVKKLAPKDVKIRISAPQERLYSTWIGGSILASLDTFKKMWVSK 1217
            SGGSTLFKGFGDRLLSEVKKLAPKDVKIRISAPQERLYSTWIGGSILASLDTFKKMWVSK
Sbjct: 301  SGGSTLFKGFGDRLLSEVKKLAPKDVKIRISAPQERLYSTWIGGSILASLDTFKKMWVSK 360

Query: 1218 KEYEEDGARSIHRKTF 1265
            KEYEEDGARSIHRKTF
Sbjct: 361  KEYEEDGARSIHRKTF 376


>ref|XP_002698500.1| PREDICTED: ARP1 actin-related protein 1 homolog A, centractin alpha
            (yeast) [Bos taurus].
          Length = 376

 Score =  755 bits (1949), Expect = 0.0
 Identities = 376/376 (100%), Positives = 376/376 (100%)
 Frame = +3

Query: 138  MESYDVIANQPVVIDNGSGVIKAGFAGDQIPKYCFPNYVGRPKHVRVMAGALEGDIFIGP 317
            MESYDVIANQPVVIDNGSGVIKAGFAGDQIPKYCFPNYVGRPKHVRVMAGALEGDIFIGP
Sbjct: 1    MESYDVIANQPVVIDNGSGVIKAGFAGDQIPKYCFPNYVGRPKHVRVMAGALEGDIFIGP 60

Query: 318  KAEEHRGLLSIRYPMEHGIVKDWNDMERIWQYVYSKDQLQTFSEEHPVLLTEAPLNPRKN 497
            KAEEHRGLLSIRYPMEHGIVKDWNDMERIWQYVYSKDQLQTFSEEHPVLLTEAPLNPRKN
Sbjct: 61   KAEEHRGLLSIRYPMEHGIVKDWNDMERIWQYVYSKDQLQTFSEEHPVLLTEAPLNPRKN 120

Query: 498  RERAAEVFFETFNVPALFISMQAVLSLYATGRTTGVVLDSGDGVTHAVPIYEGFAMPHSI 677
            RERAAEVFFETFNVPALFISMQAVLSLYATGRTTGVVLDSGDGVTHAVPIYEGFAMPHSI
Sbjct: 121  RERAAEVFFETFNVPALFISMQAVLSLYATGRTTGVVLDSGDGVTHAVPIYEGFAMPHSI 180

Query: 678  MRIDIAGRDVSRFLRLYLRKEGYDFHSSSEFEIVKAIKERACYLSINPQKDETLETEKAQ 857
            MRIDIAGRDVSRFLRLYLRKEGYDFHSSSEFEIVKAIKERACYLSINPQKDETLETEKAQ
Sbjct: 181  MRIDIAGRDVSRFLRLYLRKEGYDFHSSSEFEIVKAIKERACYLSINPQKDETLETEKAQ 240

Query: 858  YYLPDGSTIEIGPSRFRAPELLFRPDLIGEESEGIHEVLVFAIQKSDMDLRRTLFSNIVL 1037
            YYLPDGSTIEIGPSRFRAPELLFRPDLIGEESEGIHEVLVFAIQKSDMDLRRTLFSNIVL
Sbjct: 241  YYLPDGSTIEIGPSRFRAPELLFRPDLIGEESEGIHEVLVFAIQKSDMDLRRTLFSNIVL 300

Query: 1038 SGGSTLFKGFGDRLLSEVKKLAPKDVKIRISAPQERLYSTWIGGSILASLDTFKKMWVSK 1217
            SGGSTLFKGFGDRLLSEVKKLAPKDVKIRISAPQERLYSTWIGGSILASLDTFKKMWVSK
Sbjct: 301  SGGSTLFKGFGDRLLSEVKKLAPKDVKIRISAPQERLYSTWIGGSILASLDTFKKMWVSK 360

Query: 1218 KEYEEDGARSIHRKTF 1265
            KEYEEDGARSIHRKTF
Sbjct: 361  KEYEEDGARSIHRKTF 376


>ref|NP_001096808.1| beta-centractin [Bos taurus].
          Length = 376

 Score =  710 bits (1833), Expect = 0.0
 Identities = 342/376 (90%), Positives = 367/376 (97%)
 Frame = +3

Query: 138  MESYDVIANQPVVIDNGSGVIKAGFAGDQIPKYCFPNYVGRPKHVRVMAGALEGDIFIGP 317
            MESYD+IANQPVVIDNGSGVIKAGFAGDQIPKYCFPNYVGRPKH+RVMAGALEGD+FIGP
Sbjct: 1    MESYDIIANQPVVIDNGSGVIKAGFAGDQIPKYCFPNYVGRPKHMRVMAGALEGDLFIGP 60

Query: 318  KAEEHRGLLSIRYPMEHGIVKDWNDMERIWQYVYSKDQLQTFSEEHPVLLTEAPLNPRKN 497
            KAEEHRGLL+IRYPMEHG+V+DWNDMERIWQYVYSKDQLQTFSEEHPVLLTEAPLNP KN
Sbjct: 61   KAEEHRGLLAIRYPMEHGVVRDWNDMERIWQYVYSKDQLQTFSEEHPVLLTEAPLNPSKN 120

Query: 498  RERAAEVFFETFNVPALFISMQAVLSLYATGRTTGVVLDSGDGVTHAVPIYEGFAMPHSI 677
            RE+AAEVFFETFNVPALFISMQAVLSLYATGRTTGVVLDSGDGVTHAVP+YEGFAMPHSI
Sbjct: 121  REKAAEVFFETFNVPALFISMQAVLSLYATGRTTGVVLDSGDGVTHAVPVYEGFAMPHSI 180

Query: 678  MRIDIAGRDVSRFLRLYLRKEGYDFHSSSEFEIVKAIKERACYLSINPQKDETLETEKAQ 857
            MR+DIAGRDVSR+LRL LRKEG DFH+S+EFE+V+ IKERACYLSINPQKDE LETEK Q
Sbjct: 181  MRVDIAGRDVSRYLRLLLRKEGADFHTSAEFEVVRTIKERACYLSINPQKDEALETEKVQ 240

Query: 858  YYLPDGSTIEIGPSRFRAPELLFRPDLIGEESEGIHEVLVFAIQKSDMDLRRTLFSNIVL 1037
            Y LPDGST+ +GP+RFRAPELLF+PDLIG+ESEG+HEVLVFAI KSDMDLRRTLF+NI+L
Sbjct: 241  YTLPDGSTLNVGPARFRAPELLFQPDLIGDESEGLHEVLVFAIHKSDMDLRRTLFANIML 300

Query: 1038 SGGSTLFKGFGDRLLSEVKKLAPKDVKIRISAPQERLYSTWIGGSILASLDTFKKMWVSK 1217
            SGGSTLFKGFGDRLLSEVKKLAPKDVKI+ISAPQERLYSTWIGGSILASLDTFKKMWVSK
Sbjct: 301  SGGSTLFKGFGDRLLSEVKKLAPKDVKIKISAPQERLYSTWIGGSILASLDTFKKMWVSK 360

Query: 1218 KEYEEDGARSIHRKTF 1265
            KEYEEDG+R+IHRKTF
Sbjct: 361  KEYEEDGSRAIHRKTF 376


>ref|NP_001028790.1| actin, cytoplasmic 2 [Bos taurus].
          Length = 375

 Score =  425 bits (1092), Expect = e-118
 Identities = 197/369 (53%), Positives = 276/369 (74%), Gaps = 4/369 (1%)
 Frame = +3

Query: 171  VVIDNGSGVIKAGFAGDQIPKYCFPNYVGRPKHVRVMAGALEGDIFIGPKAEEHRGLLSI 350
            +VIDNGSG+ KAGFAGD  P+  FP+ VGRP+H  VM G  + D ++G +A+  RG+L++
Sbjct: 8    LVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 67

Query: 351  RYPMEHGIVKDWNDMERIWQYVYSKDQLQTFSEEHPVLLTEAPLNPRKNRERAAEVFFET 530
            +YP+EHGIV +W+DME+IW + +  ++L+   EEHPVLLTEAPLNP+ NRE+  ++ FET
Sbjct: 68   KYPIEHGIVTNWDDMEKIWHHTFY-NELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 126

Query: 531  FNVPALFISMQAVLSLYATGRTTGVVLDSGDGVTHAVPIYEGFAMPHSIMRIDIAGRDVS 710
            FN PA+++++QAVLSLYA+GRTTG+V+DSGDGVTH VPIYEG+A+PH+I+R+D+AGRD++
Sbjct: 127  FNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLT 186

Query: 711  RFLRLYLRKEGYDFHSSSEFEIVKAIKERACYLSINPQKDETLETEKA----QYYLPDGS 878
             +L   L + GY F +++E EIV+ IKE+ CY++++ +++       +     Y LPDG 
Sbjct: 187  DYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQ 246

Query: 879  TIEIGPSRFRAPELLFRPDLIGEESEGIHEVLVFAIQKSDMDLRRTLFSNIVLSGGSTLF 1058
             I IG  RFR PE LF+P  +G ES GIHE    +I K D+D+R+ L++N VLSGG+T++
Sbjct: 247  VITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLSGGTTMY 306

Query: 1059 KGFGDRLLSEVKKLAPKDVKIRISAPQERLYSTWIGGSILASLDTFKKMWVSKKEYEEDG 1238
             G  DR+  E+  LAP  +KI+I AP ER YS WIGGSILASL TF++MW+SK+EY+E G
Sbjct: 307  PGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESG 366

Query: 1239 ARSIHRKTF 1265
               +HRK F
Sbjct: 367  PSIVHRKCF 375


>ref|NP_001029757.1| actin, alpha cardiac muscle 1 [Bos taurus].
          Length = 377

 Score =  425 bits (1092), Expect = e-118
 Identities = 198/369 (53%), Positives = 275/369 (74%), Gaps = 4/369 (1%)
 Frame = +3

Query: 171  VVIDNGSGVIKAGFAGDQIPKYCFPNYVGRPKHVRVMAGALEGDIFIGPKAEEHRGLLSI 350
            +V DNGSG++KAGFAGD  P+  FP+ VGRP+H  VM G  + D ++G +A+  RG+L++
Sbjct: 10   LVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 69

Query: 351  RYPMEHGIVKDWNDMERIWQYVYSKDQLQTFSEEHPVLLTEAPLNPRKNRERAAEVFFET 530
            +YP+EHGI+ +W+DME+IW + +  ++L+   EEHP LLTEAPLNP+ NRE+  ++ FET
Sbjct: 70   KYPIEHGIITNWDDMEKIWHHTFY-NELRVAPEEHPTLLTEAPLNPKANREKMTQIMFET 128

Query: 531  FNVPALFISMQAVLSLYATGRTTGVVLDSGDGVTHAVPIYEGFAMPHSIMRIDIAGRDVS 710
            FNVPA+++++QAVLSLYA+GRTTG+VLDSGDGVTH VPIYEG+A+PH+IMR+D+AGRD++
Sbjct: 129  FNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGRDLT 188

Query: 711  RFLRLYLRKEGYDFHSSSEFEIVKAIKERACYLSINPQKDETLETEKA----QYYLPDGS 878
             +L   L + GY F +++E EIV+ IKE+ CY++++ + +       +     Y LPDG 
Sbjct: 189  DYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYELPDGQ 248

Query: 879  TIEIGPSRFRAPELLFRPDLIGEESEGIHEVLVFAIQKSDMDLRRTLFSNIVLSGGSTLF 1058
             I IG  RFR PE LF+P  IG ES GIHE    +I K D+D+R+ L++N VLSGG+T++
Sbjct: 249  VITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVLSGGTTMY 308

Query: 1059 KGFGDRLLSEVKKLAPKDVKIRISAPQERLYSTWIGGSILASLDTFKKMWVSKKEYEEDG 1238
             G  DR+  E+  LAP  +KI+I AP ER YS WIGGSILASL TF++MW+SK+EY+E G
Sbjct: 309  PGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDEAG 368

Query: 1239 ARSIHRKTF 1265
               +HRK F
Sbjct: 369  PSIVHRKCF 377


>ref|NP_776404.2| actin, cytoplasmic 1 [Bos taurus].
          Length = 375

 Score =  424 bits (1091), Expect = e-118
 Identities = 196/369 (53%), Positives = 276/369 (74%), Gaps = 4/369 (1%)
 Frame = +3

Query: 171  VVIDNGSGVIKAGFAGDQIPKYCFPNYVGRPKHVRVMAGALEGDIFIGPKAEEHRGLLSI 350
            +V+DNGSG+ KAGFAGD  P+  FP+ VGRP+H  VM G  + D ++G +A+  RG+L++
Sbjct: 8    LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 67

Query: 351  RYPMEHGIVKDWNDMERIWQYVYSKDQLQTFSEEHPVLLTEAPLNPRKNRERAAEVFFET 530
            +YP+EHGIV +W+DME+IW + +  ++L+   EEHPVLLTEAPLNP+ NRE+  ++ FET
Sbjct: 68   KYPIEHGIVTNWDDMEKIWHHTFY-NELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 126

Query: 531  FNVPALFISMQAVLSLYATGRTTGVVLDSGDGVTHAVPIYEGFAMPHSIMRIDIAGRDVS 710
            FN PA+++++QAVLSLYA+GRTTG+V+DSGDGVTH VPIYEG+A+PH+I+R+D+AGRD++
Sbjct: 127  FNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLT 186

Query: 711  RFLRLYLRKEGYDFHSSSEFEIVKAIKERACYLSINPQKDETLETEKA----QYYLPDGS 878
             +L   L + GY F +++E EIV+ IKE+ CY++++ +++       +     Y LPDG 
Sbjct: 187  DYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQ 246

Query: 879  TIEIGPSRFRAPELLFRPDLIGEESEGIHEVLVFAIQKSDMDLRRTLFSNIVLSGGSTLF 1058
             I IG  RFR PE LF+P  +G ES GIHE    +I K D+D+R+ L++N VLSGG+T++
Sbjct: 247  VITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLSGGTTMY 306

Query: 1059 KGFGDRLLSEVKKLAPKDVKIRISAPQERLYSTWIGGSILASLDTFKKMWVSKKEYEEDG 1238
             G  DR+  E+  LAP  +KI+I AP ER YS WIGGSILASL TF++MW+SK+EY+E G
Sbjct: 307  PGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESG 366

Query: 1239 ARSIHRKTF 1265
               +HRK F
Sbjct: 367  PSIVHRKCF 375


>ref|NP_001029674.1| actin, aortic smooth muscle [Bos taurus].
          Length = 377

 Score =  422 bits (1086), Expect = e-118
 Identities = 198/369 (53%), Positives = 274/369 (74%), Gaps = 4/369 (1%)
 Frame = +3

Query: 171  VVIDNGSGVIKAGFAGDQIPKYCFPNYVGRPKHVRVMAGALEGDIFIGPKAEEHRGLLSI 350
            +V DNGSG+ KAGFAGD  P+  FP+ VGRP+H  VM G  + D ++G +A+  RG+L++
Sbjct: 10   LVCDNGSGLCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 69

Query: 351  RYPMEHGIVKDWNDMERIWQYVYSKDQLQTFSEEHPVLLTEAPLNPRKNRERAAEVFFET 530
            +YP+EHGI+ +W+DME+IW + +  ++L+   EEHP LLTEAPLNP+ NRE+  ++ FET
Sbjct: 70   KYPIEHGIITNWDDMEKIWHHSFY-NELRVAPEEHPTLLTEAPLNPKANREKMTQIMFET 128

Query: 531  FNVPALFISMQAVLSLYATGRTTGVVLDSGDGVTHAVPIYEGFAMPHSIMRIDIAGRDVS 710
            FNVPA+++++QAVLSLYA+GRTTG+VLDSGDGVTH VPIYEG+A+PH+IMR+D+AGRD++
Sbjct: 129  FNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGRDLT 188

Query: 711  RFLRLYLRKEGYDFHSSSEFEIVKAIKERACYLSINPQKDETLETEKA----QYYLPDGS 878
             +L   L + GY F +++E EIV+ IKE+ CY++++ + +       +     Y LPDG 
Sbjct: 189  DYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYELPDGQ 248

Query: 879  TIEIGPSRFRAPELLFRPDLIGEESEGIHEVLVFAIQKSDMDLRRTLFSNIVLSGGSTLF 1058
             I IG  RFR PE LF+P  IG ES GIHE    +I K D+D+R+ L++N VLSGG+T++
Sbjct: 249  VITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVLSGGTTMY 308

Query: 1059 KGFGDRLLSEVKKLAPKDVKIRISAPQERLYSTWIGGSILASLDTFKKMWVSKKEYEEDG 1238
             G  DR+  E+  LAP  +KI+I AP ER YS WIGGSILASL TF++MW+SK+EY+E G
Sbjct: 309  PGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDEAG 368

Query: 1239 ARSIHRKTF 1265
               +HRK F
Sbjct: 369  PSIVHRKCF 377


>ref|NP_001013610.1| actin, gamma-enteric smooth muscle [Bos taurus].
          Length = 376

 Score =  422 bits (1084), Expect = e-117
 Identities = 198/369 (53%), Positives = 273/369 (73%), Gaps = 4/369 (1%)
 Frame = +3

Query: 171  VVIDNGSGVIKAGFAGDQIPKYCFPNYVGRPKHVRVMAGALEGDIFIGPKAEEHRGLLSI 350
            +V DNGSG+ KAGFAGD  P+  FP+ VGRP+H  VM G  + D ++G +A+  RG+L++
Sbjct: 9    LVCDNGSGLCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 68

Query: 351  RYPMEHGIVKDWNDMERIWQYVYSKDQLQTFSEEHPVLLTEAPLNPRKNRERAAEVFFET 530
            +YP+EHGI+ +W+DME+IW + +  ++L+   EEHP LLTEAPLNP+ NRE+  ++ FET
Sbjct: 69   KYPIEHGIITNWDDMEKIWHHSFY-NELRVAPEEHPTLLTEAPLNPKANREKMTQIMFET 127

Query: 531  FNVPALFISMQAVLSLYATGRTTGVVLDSGDGVTHAVPIYEGFAMPHSIMRIDIAGRDVS 710
            FNVPA+++++QAVLSLYA+GRTTG+VLDSGDGVTH VPIYEG+A+PH+IMR+D+AGRD++
Sbjct: 128  FNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGRDLT 187

Query: 711  RFLRLYLRKEGYDFHSSSEFEIVKAIKERACYLSINPQKDETLETEKA----QYYLPDGS 878
             +L   L + GY F +++E EIV+ IKE+ CY++++ + +       +     Y LPDG 
Sbjct: 188  DYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYELPDGQ 247

Query: 879  TIEIGPSRFRAPELLFRPDLIGEESEGIHEVLVFAIQKSDMDLRRTLFSNIVLSGGSTLF 1058
             I IG  RFR PE LF+P  IG ES GIHE    +I K D+D+R+ L++N VLSGG+T++
Sbjct: 248  VITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVLSGGTTMY 307

Query: 1059 KGFGDRLLSEVKKLAPKDVKIRISAPQERLYSTWIGGSILASLDTFKKMWVSKKEYEEDG 1238
             G  DR+  E+  LAP  +KI+I AP ER YS WIGGSILASL TF++MW+SK EY+E G
Sbjct: 308  PGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKPEYDEAG 367

Query: 1239 ARSIHRKTF 1265
               +HRK F
Sbjct: 368  PSIVHRKCF 376


>ref|NP_776650.1| actin, alpha skeletal muscle [Bos taurus].
          Length = 377

 Score =  421 bits (1082), Expect = e-117
 Identities = 195/369 (52%), Positives = 274/369 (74%), Gaps = 4/369 (1%)
 Frame = +3

Query: 171  VVIDNGSGVIKAGFAGDQIPKYCFPNYVGRPKHVRVMAGALEGDIFIGPKAEEHRGLLSI 350
            +V DNGSG++KAGFAGD  P+  FP+ VGRP+H  VM G  + D ++G +A+  RG+L++
Sbjct: 10   LVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 69

Query: 351  RYPMEHGIVKDWNDMERIWQYVYSKDQLQTFSEEHPVLLTEAPLNPRKNRERAAEVFFET 530
            +YP+EHGI+ +W+DME+IW + +  ++L+   EEHP LLTEAPLNP+ NRE+  ++ FET
Sbjct: 70   KYPIEHGIITNWDDMEKIWHHTFY-NELRVAPEEHPTLLTEAPLNPKANREKMTQIMFET 128

Query: 531  FNVPALFISMQAVLSLYATGRTTGVVLDSGDGVTHAVPIYEGFAMPHSIMRIDIAGRDVS 710
            FNVPA+++++QAVLSLYA+GRTTG+VLDSGDGVTH VPIYEG+A+PH+IMR+D+AGRD++
Sbjct: 129  FNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGRDLT 188

Query: 711  RFLRLYLRKEGYDFHSSSEFEIVKAIKERACYLSINPQKDETLETEKA----QYYLPDGS 878
             +L   L + GY F +++E EIV+ IKE+ CY++++ + +       +     Y LPDG 
Sbjct: 189  DYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYELPDGQ 248

Query: 879  TIEIGPSRFRAPELLFRPDLIGEESEGIHEVLVFAIQKSDMDLRRTLFSNIVLSGGSTLF 1058
             I IG  RFR PE LF+P  IG ES GIHE    +I K D+D+R+ L++N V+SGG+T++
Sbjct: 249  VITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVMSGGTTMY 308

Query: 1059 KGFGDRLLSEVKKLAPKDVKIRISAPQERLYSTWIGGSILASLDTFKKMWVSKKEYEEDG 1238
             G  DR+  E+  LAP  +KI+I AP ER YS WIGGSIL SL TF++MW++K+EY+E G
Sbjct: 309  PGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILRSLSTFQQMWITKQEYDEAG 368

Query: 1239 ARSIHRKTF 1265
               +HRK F
Sbjct: 369  PSIVHRKCF 377


>ref|XP_002696363.1| PREDICTED: beta actin-like [Bos taurus].
          Length = 376

 Score =  416 bits (1069), Expect = e-116
 Identities = 189/369 (51%), Positives = 275/369 (74%), Gaps = 4/369 (1%)
 Frame = +3

Query: 171  VVIDNGSGVIKAGFAGDQIPKYCFPNYVGRPKHVRVMAGALEGDIFIGPKAEEHRGLLSI 350
            +V+DNGSG+ KAGF GD  P+  FP+ VGRP+H  VM G  + D ++G +A+  RG+L++
Sbjct: 9    LVVDNGSGMCKAGFGGDDAPRAVFPSMVGRPRHQGVMVGMGQKDCYVGDEAQSKRGILTL 68

Query: 351  RYPMEHGIVKDWNDMERIWQYVYSKDQLQTFSEEHPVLLTEAPLNPRKNRERAAEVFFET 530
            +YP+EHG+V +W+DME+IW + +  ++L+   +EHP+LLTEAPLNP+ NRE+  ++ FE 
Sbjct: 69   KYPIEHGVVTNWDDMEKIWHHTFY-NELRVAPDEHPILLTEAPLNPKINREKMTQIMFEA 127

Query: 531  FNVPALFISMQAVLSLYATGRTTGVVLDSGDGVTHAVPIYEGFAMPHSIMRIDIAGRDVS 710
            FN PA+++++QAVLSLYA+GRTTG+V+DSGDGVTH VPIYEG+A+PH+I+R+D+AGRD++
Sbjct: 128  FNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLT 187

Query: 711  RFLRLYLRKEGYDFHSSSEFEIVKAIKERACYLSINPQKD----ETLETEKAQYYLPDGS 878
             +L   L + GY F +++E EIV+ +KE+ CY++++ +++        + +  Y LPDG 
Sbjct: 188  DYLMKILTERGYSFTTTAEREIVRDVKEKLCYVALDFEQEMVSTAASSSLERSYELPDGQ 247

Query: 879  TIEIGPSRFRAPELLFRPDLIGEESEGIHEVLVFAIQKSDMDLRRTLFSNIVLSGGSTLF 1058
             I IG  RFR PE +F+P  +G ES GIHE    +I K D+D+R+ L++N VLSGGST++
Sbjct: 248  VITIGNERFRCPEAIFQPSFLGIESSGIHETTFNSIMKCDVDIRKDLYANTVLSGGSTMY 307

Query: 1059 KGFGDRLLSEVKKLAPKDVKIRISAPQERLYSTWIGGSILASLDTFKKMWVSKKEYEEDG 1238
             G  +R+  E+  LAP  +KI+I AP ER YS WIGGSILASL TF++MW+SK+EY+E G
Sbjct: 308  PGIAERMQKEIVALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDEAG 367

Query: 1239 ARSIHRKTF 1265
               +HRK F
Sbjct: 368  PPIVHRKCF 376


  Database: RefSeq49_BP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 17,681,374
  Number of sequences in database:  33,088
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33088
Number of Hits to DB: 108,338,139
Number of extensions: 3312813
Number of successful extensions: 11559
Number of sequences better than 1.0e-05: 37
Number of HSP's gapped: 11418
Number of HSP's successfully gapped: 40
Length of query: 867
Length of database: 17,681,374
Length adjustment: 111
Effective length of query: 756
Effective length of database: 14,008,606
Effective search space: 10590506136
Effective search space used: 10590506136
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-013083
         (2602 letters)

Database: RefSeq49_CP.fasta 
           33,336 sequences; 18,874,504 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_001003164.1| alpha-centractin [Canis lupus familiaris].        755   0.0  
Alignment   gi|XP_854473.1| PREDICTED: similar to ARP1 actin-related protei...   711   0.0  
Alignment   gi|XP_535424.1| PREDICTED: similar to Actin, alpha cardiac (Alp...   425   e-118
Alignment   gi|XP_534781.2| PREDICTED: similar to Actin, aortic smooth musc...   422   e-118
Alignment   gi|NP_001182774.1| actin, cytoplasmic 1 [Canis lupus familiaris].    422   e-118
Alignment   gi|XP_533002.2| PREDICTED: similar to Actin, gamma-enteric smoo...   422   e-117
Alignment   gi|XP_533132.2| PREDICTED: hypothetical protein XP_533132 [Cani...   422   e-117
Alignment   gi|XP_544346.1| PREDICTED: similar to Actin, cytoplasmic 1 (Bet...   419   e-117
Alignment   gi|XP_861856.1| PREDICTED: similar to cytoplasmic beta-actin is...   414   e-115
Alignment   gi|NP_001003349.1| beta-actin-like [Canis lupus familiaris].         405   e-113

>ref|NP_001003164.1| alpha-centractin [Canis lupus familiaris].
          Length = 376

 Score =  755 bits (1949), Expect = 0.0
 Identities = 376/376 (100%), Positives = 376/376 (100%)
 Frame = +3

Query: 138  MESYDVIANQPVVIDNGSGVIKAGFAGDQIPKYCFPNYVGRPKHVRVMAGALEGDIFIGP 317
            MESYDVIANQPVVIDNGSGVIKAGFAGDQIPKYCFPNYVGRPKHVRVMAGALEGDIFIGP
Sbjct: 1    MESYDVIANQPVVIDNGSGVIKAGFAGDQIPKYCFPNYVGRPKHVRVMAGALEGDIFIGP 60

Query: 318  KAEEHRGLLSIRYPMEHGIVKDWNDMERIWQYVYSKDQLQTFSEEHPVLLTEAPLNPRKN 497
            KAEEHRGLLSIRYPMEHGIVKDWNDMERIWQYVYSKDQLQTFSEEHPVLLTEAPLNPRKN
Sbjct: 61   KAEEHRGLLSIRYPMEHGIVKDWNDMERIWQYVYSKDQLQTFSEEHPVLLTEAPLNPRKN 120

Query: 498  RERAAEVFFETFNVPALFISMQAVLSLYATGRTTGVVLDSGDGVTHAVPIYEGFAMPHSI 677
            RERAAEVFFETFNVPALFISMQAVLSLYATGRTTGVVLDSGDGVTHAVPIYEGFAMPHSI
Sbjct: 121  RERAAEVFFETFNVPALFISMQAVLSLYATGRTTGVVLDSGDGVTHAVPIYEGFAMPHSI 180

Query: 678  MRIDIAGRDVSRFLRLYLRKEGYDFHSSSEFEIVKAIKERACYLSINPQKDETLETEKAQ 857
            MRIDIAGRDVSRFLRLYLRKEGYDFHSSSEFEIVKAIKERACYLSINPQKDETLETEKAQ
Sbjct: 181  MRIDIAGRDVSRFLRLYLRKEGYDFHSSSEFEIVKAIKERACYLSINPQKDETLETEKAQ 240

Query: 858  YYLPDGSTIEIGPSRFRAPELLFRPDLIGEESEGIHEVLVFAIQKSDMDLRRTLFSNIVL 1037
            YYLPDGSTIEIGPSRFRAPELLFRPDLIGEESEGIHEVLVFAIQKSDMDLRRTLFSNIVL
Sbjct: 241  YYLPDGSTIEIGPSRFRAPELLFRPDLIGEESEGIHEVLVFAIQKSDMDLRRTLFSNIVL 300

Query: 1038 SGGSTLFKGFGDRLLSEVKKLAPKDVKIRISAPQERLYSTWIGGSILASLDTFKKMWVSK 1217
            SGGSTLFKGFGDRLLSEVKKLAPKDVKIRISAPQERLYSTWIGGSILASLDTFKKMWVSK
Sbjct: 301  SGGSTLFKGFGDRLLSEVKKLAPKDVKIRISAPQERLYSTWIGGSILASLDTFKKMWVSK 360

Query: 1218 KEYEEDGARSIHRKTF 1265
            KEYEEDGARSIHRKTF
Sbjct: 361  KEYEEDGARSIHRKTF 376


>ref|XP_854473.1| PREDICTED: similar to ARP1 actin-related protein 1 homolog B,
            centractin beta [Canis familiaris].
          Length = 376

 Score =  711 bits (1834), Expect = 0.0
 Identities = 342/376 (90%), Positives = 367/376 (97%)
 Frame = +3

Query: 138  MESYDVIANQPVVIDNGSGVIKAGFAGDQIPKYCFPNYVGRPKHVRVMAGALEGDIFIGP 317
            MESYD+IANQPVVIDNGSGVIKAGFAGDQIPKYCFPNYVGRPKH+RVMAGALEGD+FIGP
Sbjct: 1    MESYDIIANQPVVIDNGSGVIKAGFAGDQIPKYCFPNYVGRPKHMRVMAGALEGDLFIGP 60

Query: 318  KAEEHRGLLSIRYPMEHGIVKDWNDMERIWQYVYSKDQLQTFSEEHPVLLTEAPLNPRKN 497
            KAEEHRGLL+IRYPMEHG+V+DWNDMERIWQYVYSKDQLQTFSEEHPVLLTEAPLNP KN
Sbjct: 61   KAEEHRGLLAIRYPMEHGVVRDWNDMERIWQYVYSKDQLQTFSEEHPVLLTEAPLNPSKN 120

Query: 498  RERAAEVFFETFNVPALFISMQAVLSLYATGRTTGVVLDSGDGVTHAVPIYEGFAMPHSI 677
            RE+AAEVFFETFNVPALFISMQAVLSLYATGRTTGVVLDSGDGVTHAVPIYEGFAMPHSI
Sbjct: 121  REKAAEVFFETFNVPALFISMQAVLSLYATGRTTGVVLDSGDGVTHAVPIYEGFAMPHSI 180

Query: 678  MRIDIAGRDVSRFLRLYLRKEGYDFHSSSEFEIVKAIKERACYLSINPQKDETLETEKAQ 857
            MR+DIAGRDVSR+LRL LRKEG DFH+S+EFE+V+ IKERACYLSINPQKDE LETEK Q
Sbjct: 181  MRVDIAGRDVSRYLRLLLRKEGVDFHTSAEFEVVRTIKERACYLSINPQKDEALETEKVQ 240

Query: 858  YYLPDGSTIEIGPSRFRAPELLFRPDLIGEESEGIHEVLVFAIQKSDMDLRRTLFSNIVL 1037
            Y LPDGS +++GP+RFRAPELLF+PDL+G+ESEG+HEVLVFAI KSDMDLRRTLF+NIVL
Sbjct: 241  YTLPDGSVLDVGPARFRAPELLFQPDLVGDESEGLHEVLVFAIHKSDMDLRRTLFANIVL 300

Query: 1038 SGGSTLFKGFGDRLLSEVKKLAPKDVKIRISAPQERLYSTWIGGSILASLDTFKKMWVSK 1217
            SGGSTLFKGFGDRLLSEVKKLAPKDVKI+ISAPQERLYSTWIGGSILASLDTFKKMWVSK
Sbjct: 301  SGGSTLFKGFGDRLLSEVKKLAPKDVKIKISAPQERLYSTWIGGSILASLDTFKKMWVSK 360

Query: 1218 KEYEEDGARSIHRKTF 1265
            KEYEEDG+R+IHRKTF
Sbjct: 361  KEYEEDGSRAIHRKTF 376


>ref|XP_535424.1| PREDICTED: similar to Actin, alpha cardiac (Alpha-cardiac actin)
            isoform 3 [Canis familiaris].
          Length = 377

 Score =  425 bits (1092), Expect = e-118
 Identities = 198/369 (53%), Positives = 275/369 (74%), Gaps = 4/369 (1%)
 Frame = +3

Query: 171  VVIDNGSGVIKAGFAGDQIPKYCFPNYVGRPKHVRVMAGALEGDIFIGPKAEEHRGLLSI 350
            +V DNGSG++KAGFAGD  P+  FP+ VGRP+H  VM G  + D ++G +A+  RG+L++
Sbjct: 10   LVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 69

Query: 351  RYPMEHGIVKDWNDMERIWQYVYSKDQLQTFSEEHPVLLTEAPLNPRKNRERAAEVFFET 530
            +YP+EHGI+ +W+DME+IW + +  ++L+   EEHP LLTEAPLNP+ NRE+  ++ FET
Sbjct: 70   KYPIEHGIITNWDDMEKIWHHTFY-NELRVAPEEHPTLLTEAPLNPKANREKMTQIMFET 128

Query: 531  FNVPALFISMQAVLSLYATGRTTGVVLDSGDGVTHAVPIYEGFAMPHSIMRIDIAGRDVS 710
            FNVPA+++++QAVLSLYA+GRTTG+VLDSGDGVTH VPIYEG+A+PH+IMR+D+AGRD++
Sbjct: 129  FNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGRDLT 188

Query: 711  RFLRLYLRKEGYDFHSSSEFEIVKAIKERACYLSINPQKDETLETEKA----QYYLPDGS 878
             +L   L + GY F +++E EIV+ IKE+ CY++++ + +       +     Y LPDG 
Sbjct: 189  DYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYELPDGQ 248

Query: 879  TIEIGPSRFRAPELLFRPDLIGEESEGIHEVLVFAIQKSDMDLRRTLFSNIVLSGGSTLF 1058
             I IG  RFR PE LF+P  IG ES GIHE    +I K D+D+R+ L++N VLSGG+T++
Sbjct: 249  VITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVLSGGTTMY 308

Query: 1059 KGFGDRLLSEVKKLAPKDVKIRISAPQERLYSTWIGGSILASLDTFKKMWVSKKEYEEDG 1238
             G  DR+  E+  LAP  +KI+I AP ER YS WIGGSILASL TF++MW+SK+EY+E G
Sbjct: 309  PGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDEAG 368

Query: 1239 ARSIHRKTF 1265
               +HRK F
Sbjct: 369  PSIVHRKCF 377


>ref|XP_534781.2| PREDICTED: similar to Actin, aortic smooth muscle (Alpha-actin 2)
            [Canis familiaris].
          Length = 377

 Score =  422 bits (1086), Expect = e-118
 Identities = 198/369 (53%), Positives = 274/369 (74%), Gaps = 4/369 (1%)
 Frame = +3

Query: 171  VVIDNGSGVIKAGFAGDQIPKYCFPNYVGRPKHVRVMAGALEGDIFIGPKAEEHRGLLSI 350
            +V DNGSG+ KAGFAGD  P+  FP+ VGRP+H  VM G  + D ++G +A+  RG+L++
Sbjct: 10   LVCDNGSGLCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 69

Query: 351  RYPMEHGIVKDWNDMERIWQYVYSKDQLQTFSEEHPVLLTEAPLNPRKNRERAAEVFFET 530
            +YP+EHGI+ +W+DME+IW + +  ++L+   EEHP LLTEAPLNP+ NRE+  ++ FET
Sbjct: 70   KYPIEHGIITNWDDMEKIWHHSFY-NELRVAPEEHPTLLTEAPLNPKANREKMTQIMFET 128

Query: 531  FNVPALFISMQAVLSLYATGRTTGVVLDSGDGVTHAVPIYEGFAMPHSIMRIDIAGRDVS 710
            FNVPA+++++QAVLSLYA+GRTTG+VLDSGDGVTH VPIYEG+A+PH+IMR+D+AGRD++
Sbjct: 129  FNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGRDLT 188

Query: 711  RFLRLYLRKEGYDFHSSSEFEIVKAIKERACYLSINPQKDETLETEKA----QYYLPDGS 878
             +L   L + GY F +++E EIV+ IKE+ CY++++ + +       +     Y LPDG 
Sbjct: 189  DYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYELPDGQ 248

Query: 879  TIEIGPSRFRAPELLFRPDLIGEESEGIHEVLVFAIQKSDMDLRRTLFSNIVLSGGSTLF 1058
             I IG  RFR PE LF+P  IG ES GIHE    +I K D+D+R+ L++N VLSGG+T++
Sbjct: 249  VITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVLSGGTTMY 308

Query: 1059 KGFGDRLLSEVKKLAPKDVKIRISAPQERLYSTWIGGSILASLDTFKKMWVSKKEYEEDG 1238
             G  DR+  E+  LAP  +KI+I AP ER YS WIGGSILASL TF++MW+SK+EY+E G
Sbjct: 309  PGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDEAG 368

Query: 1239 ARSIHRKTF 1265
               +HRK F
Sbjct: 369  PSIVHRKCF 377


>ref|NP_001182774.1| actin, cytoplasmic 1 [Canis lupus familiaris].
          Length = 375

 Score =  422 bits (1085), Expect = e-118
 Identities = 195/369 (52%), Positives = 275/369 (74%), Gaps = 4/369 (1%)
 Frame = +3

Query: 171  VVIDNGSGVIKAGFAGDQIPKYCFPNYVGRPKHVRVMAGALEGDIFIGPKAEEHRGLLSI 350
            +V+DNGSG+ KAGFAGD  P+  FP+ VGRP+H  VM G  + D ++G +A+  RG+L++
Sbjct: 8    LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 67

Query: 351  RYPMEHGIVKDWNDMERIWQYVYSKDQLQTFSEEHPVLLTEAPLNPRKNRERAAEVFFET 530
            +YP+EHGIV +W+DME+IW + +  ++L+   EEHPVLLTEAPLNP+ NRE+  ++ FET
Sbjct: 68   KYPIEHGIVTNWDDMEKIWHHTFY-NELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 126

Query: 531  FNVPALFISMQAVLSLYATGRTTGVVLDSGDGVTHAVPIYEGFAMPHSIMRIDIAGRDVS 710
            FN PA+++++QAVLSLYA+GRTTG+V+DSGDGVTH VPIYEG+A+PH+I+R+D+AGRD++
Sbjct: 127  FNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLT 186

Query: 711  RFLRLYLRKEGYDFHSSSEFEIVKAIKERACYLSINPQKDETLETEKA----QYYLPDGS 878
             +L   L + GY F +++E EIV+ IKE+ CY++++ +++       +     Y LPDG 
Sbjct: 187  DYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQ 246

Query: 879  TIEIGPSRFRAPELLFRPDLIGEESEGIHEVLVFAIQKSDMDLRRTLFSNIVLSGGSTLF 1058
             I IG  RFR PE LF+P  +  ES GIHE    +I K D+D+R+ L++N VLSGG+T++
Sbjct: 247  VITIGNERFRCPEALFQPSFLSMESCGIHETTFNSIMKCDVDIRKDLYANTVLSGGTTMY 306

Query: 1059 KGFGDRLLSEVKKLAPKDVKIRISAPQERLYSTWIGGSILASLDTFKKMWVSKKEYEEDG 1238
             G  DR+  E+  LAP  +KI+I AP ER YS WIGGSILASL TF++MW+SK+EY+E G
Sbjct: 307  PGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESG 366

Query: 1239 ARSIHRKTF 1265
               +HRK F
Sbjct: 367  PSIVHRKCF 375


>ref|XP_533002.2| PREDICTED: similar to Actin, gamma-enteric smooth muscle (Smooth
            muscle gamma actin) (Alpha-actin 3) [Canis familiaris].
          Length = 376

 Score =  422 bits (1084), Expect = e-117
 Identities = 198/369 (53%), Positives = 273/369 (73%), Gaps = 4/369 (1%)
 Frame = +3

Query: 171  VVIDNGSGVIKAGFAGDQIPKYCFPNYVGRPKHVRVMAGALEGDIFIGPKAEEHRGLLSI 350
            +V DNGSG+ KAGFAGD  P+  FP+ VGRP+H  VM G  + D ++G +A+  RG+L++
Sbjct: 9    LVCDNGSGLCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 68

Query: 351  RYPMEHGIVKDWNDMERIWQYVYSKDQLQTFSEEHPVLLTEAPLNPRKNRERAAEVFFET 530
            +YP+EHGI+ +W+DME+IW + +  ++L+   EEHP LLTEAPLNP+ NRE+  ++ FET
Sbjct: 69   KYPIEHGIITNWDDMEKIWHHSFY-NELRVAPEEHPTLLTEAPLNPKANREKMTQIMFET 127

Query: 531  FNVPALFISMQAVLSLYATGRTTGVVLDSGDGVTHAVPIYEGFAMPHSIMRIDIAGRDVS 710
            FNVPA+++++QAVLSLYA+GRTTG+VLDSGDGVTH VPIYEG+A+PH+IMR+D+AGRD++
Sbjct: 128  FNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGRDLT 187

Query: 711  RFLRLYLRKEGYDFHSSSEFEIVKAIKERACYLSINPQKDETLETEKA----QYYLPDGS 878
             +L   L + GY F +++E EIV+ IKE+ CY++++ + +       +     Y LPDG 
Sbjct: 188  DYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYELPDGQ 247

Query: 879  TIEIGPSRFRAPELLFRPDLIGEESEGIHEVLVFAIQKSDMDLRRTLFSNIVLSGGSTLF 1058
             I IG  RFR PE LF+P  IG ES GIHE    +I K D+D+R+ L++N VLSGG+T++
Sbjct: 248  VITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVLSGGTTMY 307

Query: 1059 KGFGDRLLSEVKKLAPKDVKIRISAPQERLYSTWIGGSILASLDTFKKMWVSKKEYEEDG 1238
             G  DR+  E+  LAP  +KI+I AP ER YS WIGGSILASL TF++MW+SK EY+E G
Sbjct: 308  PGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKPEYDEAG 367

Query: 1239 ARSIHRKTF 1265
               +HRK F
Sbjct: 368  PSIVHRKCF 376


>ref|XP_533132.2| PREDICTED: hypothetical protein XP_533132 [Canis familiaris].
          Length = 375

 Score =  422 bits (1084), Expect = e-117
 Identities = 196/369 (53%), Positives = 274/369 (74%), Gaps = 4/369 (1%)
 Frame = +3

Query: 171  VVIDNGSGVIKAGFAGDQIPKYCFPNYVGRPKHVRVMAGALEGDIFIGPKAEEHRGLLSI 350
            +VIDNGSG+ KAGFAGD  P+  FP+ VGRP+H  VM G  + D ++G +A+  RG+L++
Sbjct: 8    LVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 67

Query: 351  RYPMEHGIVKDWNDMERIWQYVYSKDQLQTFSEEHPVLLTEAPLNPRKNRERAAEVFFET 530
            +YP+EHGIV +W DME+IW + +  ++L+   EEHPVLLTEAPLNP+ N E+  ++ FET
Sbjct: 68   KYPIEHGIVTNWEDMEKIWHHTFY-NELRVAPEEHPVLLTEAPLNPKTNGEKMTQIMFET 126

Query: 531  FNVPALFISMQAVLSLYATGRTTGVVLDSGDGVTHAVPIYEGFAMPHSIMRIDIAGRDVS 710
            FN PA+++++QAVLSLYA+GRTTG+V+DSGDGVTH VPIYEG+A+PH+I+R+D+AGRD++
Sbjct: 127  FNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLT 186

Query: 711  RFLRLYLRKEGYDFHSSSEFEIVKAIKERACYLSINPQKDETLETEKA----QYYLPDGS 878
             +L   L + GY F +++E EIV+ IKE+ CY++++ +++       +     Y LPDG 
Sbjct: 187  DYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQ 246

Query: 879  TIEIGPSRFRAPELLFRPDLIGEESEGIHEVLVFAIQKSDMDLRRTLFSNIVLSGGSTLF 1058
             I IG  RFR PE LF+P  +G ES GIHE    +I K D+D+R+ L++N VLSGG+T++
Sbjct: 247  VITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLSGGTTMY 306

Query: 1059 KGFGDRLLSEVKKLAPKDVKIRISAPQERLYSTWIGGSILASLDTFKKMWVSKKEYEEDG 1238
             G  DR+  E+  LAP  +KI+I AP ER YS WIGGSILASL TF++MW+SK+EY+E G
Sbjct: 307  PGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESG 366

Query: 1239 ARSIHRKTF 1265
               +HRK F
Sbjct: 367  PSIVHRKCF 375


>ref|XP_544346.1| PREDICTED: similar to Actin, cytoplasmic 1 (Beta-actin 1) [Canis
            familiaris].
          Length = 376

 Score =  419 bits (1077), Expect = e-117
 Identities = 190/369 (51%), Positives = 277/369 (75%), Gaps = 4/369 (1%)
 Frame = +3

Query: 171  VVIDNGSGVIKAGFAGDQIPKYCFPNYVGRPKHVRVMAGALEGDIFIGPKAEEHRGLLSI 350
            +V+DNGSG+ KAGF GD  P+  FP+ VGRP+H  VM G  + D ++G +A+  RG+L++
Sbjct: 9    LVVDNGSGMCKAGFGGDDAPRAVFPSMVGRPRHQGVMVGMGQKDCYVGDEAQSKRGILTL 68

Query: 351  RYPMEHGIVKDWNDMERIWQYVYSKDQLQTFSEEHPVLLTEAPLNPRKNRERAAEVFFET 530
            +YP+EHG+V +W+DME+IW + +  ++L+   +EHP+LLTEAPLNP+ NRE+  ++ FE 
Sbjct: 69   KYPIEHGVVTNWDDMEKIWHHTFY-NELRVAPDEHPILLTEAPLNPKINREKMTQIMFEA 127

Query: 531  FNVPALFISMQAVLSLYATGRTTGVVLDSGDGVTHAVPIYEGFAMPHSIMRIDIAGRDVS 710
            FN PA+++++QAVLSLYA+GRTTG+V+DSGDGVTH VPIYEG+A+PH+I+R+D+AGRD++
Sbjct: 128  FNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLT 187

Query: 711  RFLRLYLRKEGYDFHSSSEFEIVKAIKERACYLSINPQKD----ETLETEKAQYYLPDGS 878
             +L   L + GY+F +++E EIV+ +KE+ CY++++ +++        + +  Y LPDG 
Sbjct: 188  DYLMKILTERGYNFTTTAEREIVRDVKEKLCYVALDFEQEMGSAAASSSLERSYELPDGQ 247

Query: 879  TIEIGPSRFRAPELLFRPDLIGEESEGIHEVLVFAIQKSDMDLRRTLFSNIVLSGGSTLF 1058
             I +G  RFR PE +F+P  +G ES GIHE    +I K D+D+R+ L++NIVLSGGST++
Sbjct: 248  VITLGNERFRCPESIFQPSFLGIESSGIHETTFNSIMKCDVDIRKDLYANIVLSGGSTMY 307

Query: 1059 KGFGDRLLSEVKKLAPKDVKIRISAPQERLYSTWIGGSILASLDTFKKMWVSKKEYEEDG 1238
             G  DR+  E+  LAP  +KI+I AP ER YS WIGGSILASL TF++MW+SK+EY+E G
Sbjct: 308  PGIADRMQKEIMTLAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDEAG 367

Query: 1239 ARSIHRKTF 1265
               +HRK F
Sbjct: 368  PPIVHRKCF 376


>ref|XP_861856.1| PREDICTED: similar to cytoplasmic beta-actin isoform 9 [Canis
            familiaris].
          Length = 376

 Score =  414 bits (1064), Expect = e-115
 Identities = 196/370 (52%), Positives = 274/370 (74%), Gaps = 5/370 (1%)
 Frame = +3

Query: 171  VVIDNGSGVIKAGFAGDQIPKYCFPNYVGRPKHVRVMAGALEGDIFIGPKAEEHRGLLSI 350
            +V+DNGSG+ KAGFAGD  P+  FP+ VGRP+H  VM G  + D ++G +A+  RG+L++
Sbjct: 8    LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 67

Query: 351  RYPMEHGIVKDWNDMERIWQYVYSKDQLQTFSEEHPVLLTEAPLNPRKNRERAAEVFFET 530
            +YP+EHGIV +W+DME+IW + +  ++L+   EEHPVLLTEAPLNP+ NRE+  ++ FET
Sbjct: 68   KYPIEHGIVTNWDDMEKIWHHTFY-NELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 126

Query: 531  FNVPALFISMQAVLSLYATGRTTGVVLDSGDGVTHAVPIYEGFAMPHSIMRIDIAGRDVS 710
            FN PA+++++QAVLSLYA+GRTTG+V+DSGDGVTH VPIYEG+A+PH+I+R+D+AGRD++
Sbjct: 127  FNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLT 186

Query: 711  RFLRLYLRKEGYDFHSSSEFEIVKAIKERACYLSINPQKDETLETEKA----QYYLPDGS 878
             +L   L + GY F +++E EIV+ IKE+ CY++++ +++       +     Y LPDG 
Sbjct: 187  DYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQ 246

Query: 879  TIEIGPSRFRAPELLFR-PDLIGEESEGIHEVLVFAIQKSDMDLRRTLFSNIVLSGGSTL 1055
             I IG  RFR PE LF    L G ES GIHE    +I K D+D+R+ L++N VLSGG+T+
Sbjct: 247  VITIGNERFRCPEALFHFCFLPGMESCGIHETTFNSIMKCDVDIRKDLYANTVLSGGTTM 306

Query: 1056 FKGFGDRLLSEVKKLAPKDVKIRISAPQERLYSTWIGGSILASLDTFKKMWVSKKEYEED 1235
            + G  DR+  E+  LAP  +KI+I AP ER YS WIGGSILASL TF++MW+SK+EY+E 
Sbjct: 307  YPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDES 366

Query: 1236 GARSIHRKTF 1265
            G   +HRK F
Sbjct: 367  GPSIVHRKCF 376


>ref|NP_001003349.1| beta-actin-like [Canis lupus familiaris].
          Length = 375

 Score =  405 bits (1042), Expect = e-113
 Identities = 193/369 (52%), Positives = 268/369 (72%), Gaps = 4/369 (1%)
 Frame = +3

Query: 171  VVIDNGSGVIKAGFAGDQIPKYCFPNYVGRPKHVRVMAGALEGDIFIGPKAEEHRGLLSI 350
            +V+DNGSG+ KAGFAGD  P+  FP+ VGRP+H  VM    + D ++G +A+  RG+L++
Sbjct: 8    LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVRMGQKDSYVGDEAQSKRGILTL 67

Query: 351  RYPMEHGIVKDWNDMERIWQYVYSKDQLQTFSEEHPVLLTEAPLNPRKNRERAAEVFFET 530
            +YP+EHGIV +W+DME+IW + +  ++L+   EE PVLLTEAPLNP+ NRE+  ++ FET
Sbjct: 68   KYPIEHGIVTNWDDMEKIWHHTFY-NELRVAPEEAPVLLTEAPLNPKANREKMTQIMFET 126

Query: 531  FNVPALFISMQAVLSLYATGRTTGVVLDSGDGVTHAVPIYEGFAMPHSIMRIDIAGRDVS 710
            FN PA+++++QAVLSLYA+GRTTG+V+DSGDGVTH VPIYEG+A+PH+I+R+D+AGRD++
Sbjct: 127  FNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLT 186

Query: 711  RFLRLYLRKEGYDFHSSSEFEIVKAIKERACY----LSINPQKDETLETEKAQYYLPDGS 878
             +L   L + GY F +++E EIV+ IKE A      L        +  + +  Y LPDG 
Sbjct: 187  DYLMKILTERGYSFTTTAEREIVRDIKEEALLRRPGLRAGDGHGASSSSLEKSYELPDGQ 246

Query: 879  TIEIGPSRFRAPELLFRPDLIGEESEGIHEVLVFAIQKSDMDLRRTLFSNIVLSGGSTLF 1058
             I IG  RFR P+ LF+P  +G ES GIHE    +I K D+D+R+ L++N VLSGG+T++
Sbjct: 247  VITIGNERFRCPKALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLSGGTTMY 306

Query: 1059 KGFGDRLLSEVKKLAPKDVKIRISAPQERLYSTWIGGSILASLDTFKKMWVSKKEYEEDG 1238
             G  DR+  E+  LAP  +KI+I AP ER YS WIGGSILASL TF++MW+SK+EY+E G
Sbjct: 307  PGIADRMQKEITALAPARMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESG 366

Query: 1239 ARSIHRKTF 1265
               +HRK F
Sbjct: 367  PSIVHRKCF 375


  Database: RefSeq49_CP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 18,874,504
  Number of sequences in database:  33,336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33336
Number of Hits to DB: 113,060,595
Number of extensions: 3382332
Number of successful extensions: 12394
Number of sequences better than 1.0e-05: 54
Number of HSP's gapped: 12196
Number of HSP's successfully gapped: 61
Length of query: 867
Length of database: 18,874,504
Length adjustment: 112
Effective length of query: 755
Effective length of database: 15,140,872
Effective search space: 11431358360
Effective search space used: 11431358360
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-013083
         (2602 letters)

Database: RefSeq49_SP.fasta 
           24,897 sequences; 11,343,932 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|XP_001928912.1| PREDICTED: alpha-centractin [Sus scrofa].         755   0.0  
Alignment   gi|XP_003124967.2| PREDICTED: beta-centractin-like [Sus scrofa].     657   0.0  
Alignment   gi|XP_003359402.1| PREDICTED: alpha-centractin-like [Sus scrofa].    458   e-129
Alignment   gi|XP_003357976.1| PREDICTED: actin, cytoplasmic 2 [Sus scrofa].     425   e-119
Alignment   gi|NP_001163988.1| actin, alpha cardiac muscle 1 [Sus scrofa].       425   e-119
Alignment   gi|XP_003124328.1| PREDICTED: actin, cytoplasmic 1 [Sus scrofa].     424   e-119
Alignment   gi|NP_001161267.1| actin, alpha skeletal muscle [Sus scrofa].        423   e-118
Alignment   gi|XP_003121682.1| PREDICTED: actin, alpha cardiac muscle 1-lik...   423   e-118
Alignment   gi|NP_001158122.1| actin, aortic smooth muscle [Sus scrofa].         422   e-118
Alignment   gi|XP_003353462.1| PREDICTED: actin, alpha cardiac muscle 1-lik...   356   3e-98

>ref|XP_001928912.1| PREDICTED: alpha-centractin [Sus scrofa].
          Length = 376

 Score =  755 bits (1949), Expect = 0.0
 Identities = 376/376 (100%), Positives = 376/376 (100%)
 Frame = +3

Query: 138  MESYDVIANQPVVIDNGSGVIKAGFAGDQIPKYCFPNYVGRPKHVRVMAGALEGDIFIGP 317
            MESYDVIANQPVVIDNGSGVIKAGFAGDQIPKYCFPNYVGRPKHVRVMAGALEGDIFIGP
Sbjct: 1    MESYDVIANQPVVIDNGSGVIKAGFAGDQIPKYCFPNYVGRPKHVRVMAGALEGDIFIGP 60

Query: 318  KAEEHRGLLSIRYPMEHGIVKDWNDMERIWQYVYSKDQLQTFSEEHPVLLTEAPLNPRKN 497
            KAEEHRGLLSIRYPMEHGIVKDWNDMERIWQYVYSKDQLQTFSEEHPVLLTEAPLNPRKN
Sbjct: 61   KAEEHRGLLSIRYPMEHGIVKDWNDMERIWQYVYSKDQLQTFSEEHPVLLTEAPLNPRKN 120

Query: 498  RERAAEVFFETFNVPALFISMQAVLSLYATGRTTGVVLDSGDGVTHAVPIYEGFAMPHSI 677
            RERAAEVFFETFNVPALFISMQAVLSLYATGRTTGVVLDSGDGVTHAVPIYEGFAMPHSI
Sbjct: 121  RERAAEVFFETFNVPALFISMQAVLSLYATGRTTGVVLDSGDGVTHAVPIYEGFAMPHSI 180

Query: 678  MRIDIAGRDVSRFLRLYLRKEGYDFHSSSEFEIVKAIKERACYLSINPQKDETLETEKAQ 857
            MRIDIAGRDVSRFLRLYLRKEGYDFHSSSEFEIVKAIKERACYLSINPQKDETLETEKAQ
Sbjct: 181  MRIDIAGRDVSRFLRLYLRKEGYDFHSSSEFEIVKAIKERACYLSINPQKDETLETEKAQ 240

Query: 858  YYLPDGSTIEIGPSRFRAPELLFRPDLIGEESEGIHEVLVFAIQKSDMDLRRTLFSNIVL 1037
            YYLPDGSTIEIGPSRFRAPELLFRPDLIGEESEGIHEVLVFAIQKSDMDLRRTLFSNIVL
Sbjct: 241  YYLPDGSTIEIGPSRFRAPELLFRPDLIGEESEGIHEVLVFAIQKSDMDLRRTLFSNIVL 300

Query: 1038 SGGSTLFKGFGDRLLSEVKKLAPKDVKIRISAPQERLYSTWIGGSILASLDTFKKMWVSK 1217
            SGGSTLFKGFGDRLLSEVKKLAPKDVKIRISAPQERLYSTWIGGSILASLDTFKKMWVSK
Sbjct: 301  SGGSTLFKGFGDRLLSEVKKLAPKDVKIRISAPQERLYSTWIGGSILASLDTFKKMWVSK 360

Query: 1218 KEYEEDGARSIHRKTF 1265
            KEYEEDGARSIHRKTF
Sbjct: 361  KEYEEDGARSIHRKTF 376


>ref|XP_003124967.2| PREDICTED: beta-centractin-like [Sus scrofa].
          Length = 371

 Score =  657 bits (1694), Expect = 0.0
 Identities = 325/376 (86%), Positives = 346/376 (92%)
 Frame = +3

Query: 138  MESYDVIANQPVVIDNGSGVIKAGFAGDQIPKYCFPNYVGRPKHVRVMAGALEGDIFIGP 317
            MESYD+IANQPVVIDNGSGVIKAGFAGDQIPKYCFPNYVGRPKH+RVMAGALEGD+FIGP
Sbjct: 1    MESYDIIANQPVVIDNGSGVIKAGFAGDQIPKYCFPNYVGRPKHMRVMAGALEGDLFIGP 60

Query: 318  KAEEHRGLLSIRYPMEHGIVKDWNDMERIWQYVYSKDQLQTFSEEHPVLLTEAPLNPRKN 497
            KAEEHRGLL+I YPMEHG+V+DWNDMERIWQYVYSKDQLQTFSEEHPVLLTEAPLNP KN
Sbjct: 61   KAEEHRGLLAIHYPMEHGVVRDWNDMERIWQYVYSKDQLQTFSEEHPVLLTEAPLNPSKN 120

Query: 498  RERAAEVFFETFNVPALFISMQAVLSLYATGRTTGVVLDSGDGVTHAVPIYEGFAMPHSI 677
            RE+AAEVFFETFNVPALFISMQAVLSLYATGRTTGVVLDSGDGVTHAVPIYEGFAMPHSI
Sbjct: 121  REKAAEVFFETFNVPALFISMQAVLSLYATGRTTGVVLDSGDGVTHAVPIYEGFAMPHSI 180

Query: 678  MRIDIAGRDVSRFLRLYLRKEGYDFHSSSEFEIVKAIKERACYLSINPQKDETLETEKAQ 857
            MR+DIAGRDVSR+LRL LRKEG DFH+S+EFE+V+ IKERACYLSINPQKDE LETEK Q
Sbjct: 181  MRVDIAGRDVSRYLRLLLRKEGVDFHTSAEFEVVRTIKERACYLSINPQKDEALETEKVQ 240

Query: 858  YYLPDGSTIEIGPSRFRAPELLFRPDLIGEESEGIHEVLVFAIQKSDMDLRRTLFSNIVL 1037
            Y LPDGST+++   + +   L F        S    EVL FAI KSDMDLRRTLFSNIVL
Sbjct: 241  YLLPDGSTLDVKTGKTQVILLQF-----NSFSSYFCEVLAFAIHKSDMDLRRTLFSNIVL 295

Query: 1038 SGGSTLFKGFGDRLLSEVKKLAPKDVKIRISAPQERLYSTWIGGSILASLDTFKKMWVSK 1217
            SGGSTLFKGFGDRLLSEVKKLAPKDVKI+ISAPQERLYSTWIGGSILASLDTFKKMWVSK
Sbjct: 296  SGGSTLFKGFGDRLLSEVKKLAPKDVKIKISAPQERLYSTWIGGSILASLDTFKKMWVSK 355

Query: 1218 KEYEEDGARSIHRKTF 1265
            KEYEEDG+R+IHRKTF
Sbjct: 356  KEYEEDGSRAIHRKTF 371


>ref|XP_003359402.1| PREDICTED: alpha-centractin-like [Sus scrofa].
          Length = 294

 Score =  458 bits (1179), Expect = e-129
 Identities = 232/242 (95%), Positives = 233/242 (96%)
 Frame = +3

Query: 540  PALFISMQAVLSLYATGRTTGVVLDSGDGVTHAVPIYEGFAMPHSIMRIDIAGRDVSRFL 719
            PA    M     +YATGRTTGVVLDSGDGVTHAVPIYEGFAMPHSIMRIDIAGRDVSRFL
Sbjct: 53   PAFVTLMLNSSKIYATGRTTGVVLDSGDGVTHAVPIYEGFAMPHSIMRIDIAGRDVSRFL 112

Query: 720  RLYLRKEGYDFHSSSEFEIVKAIKERACYLSINPQKDETLETEKAQYYLPDGSTIEIGPS 899
            RLYLRKEGYDFHSSSEFEIVKAIKERACYLSINPQKDETLETEKAQYYLPDGSTIEIGPS
Sbjct: 113  RLYLRKEGYDFHSSSEFEIVKAIKERACYLSINPQKDETLETEKAQYYLPDGSTIEIGPS 172

Query: 900  RFRAPELLFRPDLIGEESEGIHEVLVFAIQKSDMDLRRTLFSNIVLSGGSTLFKGFGDRL 1079
            RFRAPELLFRPDLIGEESEGIHEVLVFAIQKSDMDLRRTLFSNIVLSGGSTLFKGFGDRL
Sbjct: 173  RFRAPELLFRPDLIGEESEGIHEVLVFAIQKSDMDLRRTLFSNIVLSGGSTLFKGFGDRL 232

Query: 1080 LSEVKKLAPKDVKIRISAPQERLYSTWIGGSILASLDTFKKMWVSKKEYEEDGARSIHRK 1259
            LSEVKKLAPKDVKIRISAPQERLYSTWIGGSILASLDTFKKMWVSKKEYEEDGARSIHRK
Sbjct: 233  LSEVKKLAPKDVKIRISAPQERLYSTWIGGSILASLDTFKKMWVSKKEYEEDGARSIHRK 292

Query: 1260 TF 1265
            TF
Sbjct: 293  TF 294


>ref|XP_003357976.1| PREDICTED: actin, cytoplasmic 2 [Sus scrofa].
          Length = 375

 Score =  425 bits (1092), Expect = e-119
 Identities = 197/369 (53%), Positives = 276/369 (74%), Gaps = 4/369 (1%)
 Frame = +3

Query: 171  VVIDNGSGVIKAGFAGDQIPKYCFPNYVGRPKHVRVMAGALEGDIFIGPKAEEHRGLLSI 350
            +VIDNGSG+ KAGFAGD  P+  FP+ VGRP+H  VM G  + D ++G +A+  RG+L++
Sbjct: 8    LVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 67

Query: 351  RYPMEHGIVKDWNDMERIWQYVYSKDQLQTFSEEHPVLLTEAPLNPRKNRERAAEVFFET 530
            +YP+EHGIV +W+DME+IW + +  ++L+   EEHPVLLTEAPLNP+ NRE+  ++ FET
Sbjct: 68   KYPIEHGIVTNWDDMEKIWHHTFY-NELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 126

Query: 531  FNVPALFISMQAVLSLYATGRTTGVVLDSGDGVTHAVPIYEGFAMPHSIMRIDIAGRDVS 710
            FN PA+++++QAVLSLYA+GRTTG+V+DSGDGVTH VPIYEG+A+PH+I+R+D+AGRD++
Sbjct: 127  FNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLT 186

Query: 711  RFLRLYLRKEGYDFHSSSEFEIVKAIKERACYLSINPQKDETLETEKA----QYYLPDGS 878
             +L   L + GY F +++E EIV+ IKE+ CY++++ +++       +     Y LPDG 
Sbjct: 187  DYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQ 246

Query: 879  TIEIGPSRFRAPELLFRPDLIGEESEGIHEVLVFAIQKSDMDLRRTLFSNIVLSGGSTLF 1058
             I IG  RFR PE LF+P  +G ES GIHE    +I K D+D+R+ L++N VLSGG+T++
Sbjct: 247  VITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLSGGTTMY 306

Query: 1059 KGFGDRLLSEVKKLAPKDVKIRISAPQERLYSTWIGGSILASLDTFKKMWVSKKEYEEDG 1238
             G  DR+  E+  LAP  +KI+I AP ER YS WIGGSILASL TF++MW+SK+EY+E G
Sbjct: 307  PGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESG 366

Query: 1239 ARSIHRKTF 1265
               +HRK F
Sbjct: 367  PSIVHRKCF 375


>ref|NP_001163988.1| actin, alpha cardiac muscle 1 [Sus scrofa].
          Length = 377

 Score =  425 bits (1092), Expect = e-119
 Identities = 198/369 (53%), Positives = 275/369 (74%), Gaps = 4/369 (1%)
 Frame = +3

Query: 171  VVIDNGSGVIKAGFAGDQIPKYCFPNYVGRPKHVRVMAGALEGDIFIGPKAEEHRGLLSI 350
            +V DNGSG++KAGFAGD  P+  FP+ VGRP+H  VM G  + D ++G +A+  RG+L++
Sbjct: 10   LVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 69

Query: 351  RYPMEHGIVKDWNDMERIWQYVYSKDQLQTFSEEHPVLLTEAPLNPRKNRERAAEVFFET 530
            +YP+EHGI+ +W+DME+IW + +  ++L+   EEHP LLTEAPLNP+ NRE+  ++ FET
Sbjct: 70   KYPIEHGIITNWDDMEKIWHHTFY-NELRVAPEEHPTLLTEAPLNPKANREKMTQIMFET 128

Query: 531  FNVPALFISMQAVLSLYATGRTTGVVLDSGDGVTHAVPIYEGFAMPHSIMRIDIAGRDVS 710
            FNVPA+++++QAVLSLYA+GRTTG+VLDSGDGVTH VPIYEG+A+PH+IMR+D+AGRD++
Sbjct: 129  FNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGRDLT 188

Query: 711  RFLRLYLRKEGYDFHSSSEFEIVKAIKERACYLSINPQKDETLETEKA----QYYLPDGS 878
             +L   L + GY F +++E EIV+ IKE+ CY++++ + +       +     Y LPDG 
Sbjct: 189  DYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYELPDGQ 248

Query: 879  TIEIGPSRFRAPELLFRPDLIGEESEGIHEVLVFAIQKSDMDLRRTLFSNIVLSGGSTLF 1058
             I IG  RFR PE LF+P  IG ES GIHE    +I K D+D+R+ L++N VLSGG+T++
Sbjct: 249  VITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVLSGGTTMY 308

Query: 1059 KGFGDRLLSEVKKLAPKDVKIRISAPQERLYSTWIGGSILASLDTFKKMWVSKKEYEEDG 1238
             G  DR+  E+  LAP  +KI+I AP ER YS WIGGSILASL TF++MW+SK+EY+E G
Sbjct: 309  PGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDEAG 368

Query: 1239 ARSIHRKTF 1265
               +HRK F
Sbjct: 369  PSIVHRKCF 377


>ref|XP_003124328.1| PREDICTED: actin, cytoplasmic 1 [Sus scrofa].
          Length = 375

 Score =  424 bits (1091), Expect = e-119
 Identities = 196/369 (53%), Positives = 276/369 (74%), Gaps = 4/369 (1%)
 Frame = +3

Query: 171  VVIDNGSGVIKAGFAGDQIPKYCFPNYVGRPKHVRVMAGALEGDIFIGPKAEEHRGLLSI 350
            +V+DNGSG+ KAGFAGD  P+  FP+ VGRP+H  VM G  + D ++G +A+  RG+L++
Sbjct: 8    LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 67

Query: 351  RYPMEHGIVKDWNDMERIWQYVYSKDQLQTFSEEHPVLLTEAPLNPRKNRERAAEVFFET 530
            +YP+EHGIV +W+DME+IW + +  ++L+   EEHPVLLTEAPLNP+ NRE+  ++ FET
Sbjct: 68   KYPIEHGIVTNWDDMEKIWHHTFY-NELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 126

Query: 531  FNVPALFISMQAVLSLYATGRTTGVVLDSGDGVTHAVPIYEGFAMPHSIMRIDIAGRDVS 710
            FN PA+++++QAVLSLYA+GRTTG+V+DSGDGVTH VPIYEG+A+PH+I+R+D+AGRD++
Sbjct: 127  FNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLT 186

Query: 711  RFLRLYLRKEGYDFHSSSEFEIVKAIKERACYLSINPQKDETLETEKA----QYYLPDGS 878
             +L   L + GY F +++E EIV+ IKE+ CY++++ +++       +     Y LPDG 
Sbjct: 187  DYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQ 246

Query: 879  TIEIGPSRFRAPELLFRPDLIGEESEGIHEVLVFAIQKSDMDLRRTLFSNIVLSGGSTLF 1058
             I IG  RFR PE LF+P  +G ES GIHE    +I K D+D+R+ L++N VLSGG+T++
Sbjct: 247  VITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLSGGTTMY 306

Query: 1059 KGFGDRLLSEVKKLAPKDVKIRISAPQERLYSTWIGGSILASLDTFKKMWVSKKEYEEDG 1238
             G  DR+  E+  LAP  +KI+I AP ER YS WIGGSILASL TF++MW+SK+EY+E G
Sbjct: 307  PGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESG 366

Query: 1239 ARSIHRKTF 1265
               +HRK F
Sbjct: 367  PSIVHRKCF 375


>ref|NP_001161267.1| actin, alpha skeletal muscle [Sus scrofa].
          Length = 377

 Score =  423 bits (1087), Expect = e-118
 Identities = 196/369 (53%), Positives = 275/369 (74%), Gaps = 4/369 (1%)
 Frame = +3

Query: 171  VVIDNGSGVIKAGFAGDQIPKYCFPNYVGRPKHVRVMAGALEGDIFIGPKAEEHRGLLSI 350
            +V DNGSG++KAGFAGD  P+  FP+ VGRP+H  VM G  + D ++G +A+  RG+L++
Sbjct: 10   LVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 69

Query: 351  RYPMEHGIVKDWNDMERIWQYVYSKDQLQTFSEEHPVLLTEAPLNPRKNRERAAEVFFET 530
            +YP+EHGI+ +W+DME+IW + +  ++L+   EEHP LLTEAPLNP+ NRE+  ++ FET
Sbjct: 70   KYPIEHGIITNWDDMEKIWHHTFY-NELRVAPEEHPTLLTEAPLNPKANREKMTQIMFET 128

Query: 531  FNVPALFISMQAVLSLYATGRTTGVVLDSGDGVTHAVPIYEGFAMPHSIMRIDIAGRDVS 710
            FNVPA+++++QAVLSLYA+GRTTG+VLDSGDGVTH VPIYEG+A+PH+IMR+D+AGRD++
Sbjct: 129  FNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGRDLT 188

Query: 711  RFLRLYLRKEGYDFHSSSEFEIVKAIKERACYLSINPQKDETLETEKA----QYYLPDGS 878
             +L   L + GY F +++E EIV+ IKE+ CY++++ + +       +     Y LPDG 
Sbjct: 189  DYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYELPDGQ 248

Query: 879  TIEIGPSRFRAPELLFRPDLIGEESEGIHEVLVFAIQKSDMDLRRTLFSNIVLSGGSTLF 1058
             I IG  RFR PE LF+P  IG ES GIHE    +I K D+D+R+ L++N V+SGG+T++
Sbjct: 249  VITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVMSGGTTMY 308

Query: 1059 KGFGDRLLSEVKKLAPKDVKIRISAPQERLYSTWIGGSILASLDTFKKMWVSKKEYEEDG 1238
             G  DR+  E+  LAP  +KI+I AP ER YS WIGGSILASL TF++MW++K+EY+E G
Sbjct: 309  PGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWITKQEYDEAG 368

Query: 1239 ARSIHRKTF 1265
               +HRK F
Sbjct: 369  PSIVHRKCF 377


>ref|XP_003121682.1| PREDICTED: actin, alpha cardiac muscle 1-like isoform 1 [Sus scrofa].
          Length = 377

 Score =  423 bits (1087), Expect = e-118
 Identities = 197/369 (53%), Positives = 275/369 (74%), Gaps = 4/369 (1%)
 Frame = +3

Query: 171  VVIDNGSGVIKAGFAGDQIPKYCFPNYVGRPKHVRVMAGALEGDIFIGPKAEEHRGLLSI 350
            +V DNGSG++KAGFAGD  P+  FP+ VGRP+H  VM G  + D ++G +A+  RG+L++
Sbjct: 10   LVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 69

Query: 351  RYPMEHGIVKDWNDMERIWQYVYSKDQLQTFSEEHPVLLTEAPLNPRKNRERAAEVFFET 530
            +YP+EHGI+ +W+DME+IW + +  ++L+   EEHP LLTEAPLNP+ NRE+  ++ FET
Sbjct: 70   KYPIEHGIITNWDDMEKIWHHTFY-NELRVAPEEHPTLLTEAPLNPKANREKMTQIMFET 128

Query: 531  FNVPALFISMQAVLSLYATGRTTGVVLDSGDGVTHAVPIYEGFAMPHSIMRIDIAGRDVS 710
            FNVPA+++++QAVLSLYA+GRTTG+VLDSGDGVTH VPIYEG+A+PH+IMR+D+AGRD++
Sbjct: 129  FNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGRDLT 188

Query: 711  RFLRLYLRKEGYDFHSSSEFEIVKAIKERACYLSINPQKDETLETEKA----QYYLPDGS 878
             +L   L + GY F +++E EIV+ IKE+ C+++++ + +       +     Y LPDG 
Sbjct: 189  DYLMKILTERGYSFVTTAEREIVRDIKEKLCHVALDFENEMATAASSSSLEKSYELPDGQ 248

Query: 879  TIEIGPSRFRAPELLFRPDLIGEESEGIHEVLVFAIQKSDMDLRRTLFSNIVLSGGSTLF 1058
             I IG  RFR PE LF+P  IG ES GIHE    +I K D+D+R+ L++N VLSGG+T++
Sbjct: 249  VITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVLSGGTTMY 308

Query: 1059 KGFGDRLLSEVKKLAPKDVKIRISAPQERLYSTWIGGSILASLDTFKKMWVSKKEYEEDG 1238
             G  DR+  E+  LAP  +KI+I AP ER YS WIGGSILASL TF++MW+SK+EY+E G
Sbjct: 309  PGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDEAG 368

Query: 1239 ARSIHRKTF 1265
               +HRK F
Sbjct: 369  PSIVHRKCF 377


>ref|NP_001158122.1| actin, aortic smooth muscle [Sus scrofa].
          Length = 377

 Score =  422 bits (1086), Expect = e-118
 Identities = 198/369 (53%), Positives = 274/369 (74%), Gaps = 4/369 (1%)
 Frame = +3

Query: 171  VVIDNGSGVIKAGFAGDQIPKYCFPNYVGRPKHVRVMAGALEGDIFIGPKAEEHRGLLSI 350
            +V DNGSG+ KAGFAGD  P+  FP+ VGRP+H  VM G  + D ++G +A+  RG+L++
Sbjct: 10   LVCDNGSGLCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 69

Query: 351  RYPMEHGIVKDWNDMERIWQYVYSKDQLQTFSEEHPVLLTEAPLNPRKNRERAAEVFFET 530
            +YP+EHGI+ +W+DME+IW + +  ++L+   EEHP LLTEAPLNP+ NRE+  ++ FET
Sbjct: 70   KYPIEHGIITNWDDMEKIWHHSFY-NELRVAPEEHPTLLTEAPLNPKANREKMTQIMFET 128

Query: 531  FNVPALFISMQAVLSLYATGRTTGVVLDSGDGVTHAVPIYEGFAMPHSIMRIDIAGRDVS 710
            FNVPA+++++QAVLSLYA+GRTTG+VLDSGDGVTH VPIYEG+A+PH+IMR+D+AGRD++
Sbjct: 129  FNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGRDLT 188

Query: 711  RFLRLYLRKEGYDFHSSSEFEIVKAIKERACYLSINPQKDETLETEKA----QYYLPDGS 878
             +L   L + GY F +++E EIV+ IKE+ CY++++ + +       +     Y LPDG 
Sbjct: 189  DYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYELPDGQ 248

Query: 879  TIEIGPSRFRAPELLFRPDLIGEESEGIHEVLVFAIQKSDMDLRRTLFSNIVLSGGSTLF 1058
             I IG  RFR PE LF+P  IG ES GIHE    +I K D+D+R+ L++N VLSGG+T++
Sbjct: 249  VITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVLSGGTTMY 308

Query: 1059 KGFGDRLLSEVKKLAPKDVKIRISAPQERLYSTWIGGSILASLDTFKKMWVSKKEYEEDG 1238
             G  DR+  E+  LAP  +KI+I AP ER YS WIGGSILASL TF++MW+SK+EY+E G
Sbjct: 309  PGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDEAG 368

Query: 1239 ARSIHRKTF 1265
               +HRK F
Sbjct: 369  PSIVHRKCF 377


>ref|XP_003353462.1| PREDICTED: actin, alpha cardiac muscle 1-like isoform 2 [Sus scrofa].
          Length = 334

 Score =  356 bits (914), Expect = 3e-98
 Identities = 178/369 (48%), Positives = 243/369 (65%), Gaps = 4/369 (1%)
 Frame = +3

Query: 171  VVIDNGSGVIKAGFAGDQIPKYCFPNYVGRPKHVRVMAGALEGDIFIGPKAEEHRGLLSI 350
            +V DNGSG++KAGFAGD  P+  FP+ VGRP+H                           
Sbjct: 10   LVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRH--------------------------- 42

Query: 351  RYPMEHGIVKDWNDMERIWQYVYSKDQLQTFSEEHPVLLTEAPLNPRKNRERAAEVFFET 530
                            +IW + +  ++L+   EEHP LLTEAPLNP+ NRE+  ++ FET
Sbjct: 43   ----------------QIWHHTFY-NELRVAPEEHPTLLTEAPLNPKANREKMTQIMFET 85

Query: 531  FNVPALFISMQAVLSLYATGRTTGVVLDSGDGVTHAVPIYEGFAMPHSIMRIDIAGRDVS 710
            FNVPA+++++QAVLSLYA+GRTTG+VLDSGDGVTH VPIYEG+A+PH+IMR+D+AGRD++
Sbjct: 86   FNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGRDLT 145

Query: 711  RFLRLYLRKEGYDFHSSSEFEIVKAIKERACYLSINPQKDETLETEKA----QYYLPDGS 878
             +L   L + GY F +++E EIV+ IKE+ C+++++ + +       +     Y LPDG 
Sbjct: 146  DYLMKILTERGYSFVTTAEREIVRDIKEKLCHVALDFENEMATAASSSSLEKSYELPDGQ 205

Query: 879  TIEIGPSRFRAPELLFRPDLIGEESEGIHEVLVFAIQKSDMDLRRTLFSNIVLSGGSTLF 1058
             I IG  RFR PE LF+P  IG ES GIHE    +I K D+D+R+ L++N VLSGG+T++
Sbjct: 206  VITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVLSGGTTMY 265

Query: 1059 KGFGDRLLSEVKKLAPKDVKIRISAPQERLYSTWIGGSILASLDTFKKMWVSKKEYEEDG 1238
             G  DR+  E+  LAP  +KI+I AP ER YS WIGGSILASL TF++MW+SK+EY+E G
Sbjct: 266  PGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDEAG 325

Query: 1239 ARSIHRKTF 1265
               +HRK F
Sbjct: 326  PSIVHRKCF 334


  Database: RefSeq49_SP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 11,343,932
  Number of sequences in database:  24,897
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 24897
Number of Hits to DB: 70,431,386
Number of extensions: 2201547
Number of successful extensions: 7410
Number of sequences better than 1.0e-05: 29
Number of HSP's gapped: 7338
Number of HSP's successfully gapped: 36
Length of query: 867
Length of database: 11,343,932
Length adjustment: 108
Effective length of query: 759
Effective length of database: 8,655,056
Effective search space: 6569187504
Effective search space used: 6569187504
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-013083
         (2602 letters)

Database: RefSeq49_MP.fasta 
           30,036 sequences; 15,617,559 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_058556.1| alpha-centractin [Mus musculus].                     755   0.0  
Alignment   gi|NP_666219.1| beta-centractin [Mus musculus].                      712   0.0  
Alignment   gi|NP_033738.1| actin, alpha cardiac muscle 1 [Mus musculus].        425   e-118
Alignment   gi|NP_033739.1| actin, cytoplasmic 2 [Mus musculus].                 425   e-118
Alignment   gi|NP_031419.1| actin, cytoplasmic 1 [Mus musculus].                 424   e-118
Alignment   gi|NP_033736.1| actin, alpha skeletal muscle [Mus musculus].         423   e-118
Alignment   gi|NP_031418.1| actin, aortic smooth muscle [Mus musculus].          422   e-118
Alignment   gi|NP_033740.2| actin, gamma-enteric smooth muscle [Mus musculu...   422   e-118
Alignment   gi|NP_780706.1| beta-actin-like protein 2 [Mus musculus].            419   e-117
Alignment   gi|XP_003084637.1| PREDICTED: actin, cytoplasmic 2-like [Mus mu...   414   e-115

>ref|NP_058556.1| alpha-centractin [Mus musculus].
          Length = 376

 Score =  755 bits (1949), Expect = 0.0
 Identities = 376/376 (100%), Positives = 376/376 (100%)
 Frame = +3

Query: 138  MESYDVIANQPVVIDNGSGVIKAGFAGDQIPKYCFPNYVGRPKHVRVMAGALEGDIFIGP 317
            MESYDVIANQPVVIDNGSGVIKAGFAGDQIPKYCFPNYVGRPKHVRVMAGALEGDIFIGP
Sbjct: 1    MESYDVIANQPVVIDNGSGVIKAGFAGDQIPKYCFPNYVGRPKHVRVMAGALEGDIFIGP 60

Query: 318  KAEEHRGLLSIRYPMEHGIVKDWNDMERIWQYVYSKDQLQTFSEEHPVLLTEAPLNPRKN 497
            KAEEHRGLLSIRYPMEHGIVKDWNDMERIWQYVYSKDQLQTFSEEHPVLLTEAPLNPRKN
Sbjct: 61   KAEEHRGLLSIRYPMEHGIVKDWNDMERIWQYVYSKDQLQTFSEEHPVLLTEAPLNPRKN 120

Query: 498  RERAAEVFFETFNVPALFISMQAVLSLYATGRTTGVVLDSGDGVTHAVPIYEGFAMPHSI 677
            RERAAEVFFETFNVPALFISMQAVLSLYATGRTTGVVLDSGDGVTHAVPIYEGFAMPHSI
Sbjct: 121  RERAAEVFFETFNVPALFISMQAVLSLYATGRTTGVVLDSGDGVTHAVPIYEGFAMPHSI 180

Query: 678  MRIDIAGRDVSRFLRLYLRKEGYDFHSSSEFEIVKAIKERACYLSINPQKDETLETEKAQ 857
            MRIDIAGRDVSRFLRLYLRKEGYDFHSSSEFEIVKAIKERACYLSINPQKDETLETEKAQ
Sbjct: 181  MRIDIAGRDVSRFLRLYLRKEGYDFHSSSEFEIVKAIKERACYLSINPQKDETLETEKAQ 240

Query: 858  YYLPDGSTIEIGPSRFRAPELLFRPDLIGEESEGIHEVLVFAIQKSDMDLRRTLFSNIVL 1037
            YYLPDGSTIEIGPSRFRAPELLFRPDLIGEESEGIHEVLVFAIQKSDMDLRRTLFSNIVL
Sbjct: 241  YYLPDGSTIEIGPSRFRAPELLFRPDLIGEESEGIHEVLVFAIQKSDMDLRRTLFSNIVL 300

Query: 1038 SGGSTLFKGFGDRLLSEVKKLAPKDVKIRISAPQERLYSTWIGGSILASLDTFKKMWVSK 1217
            SGGSTLFKGFGDRLLSEVKKLAPKDVKIRISAPQERLYSTWIGGSILASLDTFKKMWVSK
Sbjct: 301  SGGSTLFKGFGDRLLSEVKKLAPKDVKIRISAPQERLYSTWIGGSILASLDTFKKMWVSK 360

Query: 1218 KEYEEDGARSIHRKTF 1265
            KEYEEDGARSIHRKTF
Sbjct: 361  KEYEEDGARSIHRKTF 376


>ref|NP_666219.1| beta-centractin [Mus musculus].
          Length = 376

 Score =  712 bits (1837), Expect = 0.0
 Identities = 343/376 (91%), Positives = 367/376 (97%)
 Frame = +3

Query: 138  MESYDVIANQPVVIDNGSGVIKAGFAGDQIPKYCFPNYVGRPKHVRVMAGALEGDIFIGP 317
            MESYD+IANQPVVIDNGSGVIKAGFAGDQIPKYCFPNYVGRPKH+RVMAGALEGD+FIGP
Sbjct: 1    MESYDIIANQPVVIDNGSGVIKAGFAGDQIPKYCFPNYVGRPKHMRVMAGALEGDLFIGP 60

Query: 318  KAEEHRGLLSIRYPMEHGIVKDWNDMERIWQYVYSKDQLQTFSEEHPVLLTEAPLNPRKN 497
            KAEEHRGLL+IRYPMEHG+V+DWNDMERIWQYVYSKDQLQTFSEEHPVLLTEAPLNP KN
Sbjct: 61   KAEEHRGLLTIRYPMEHGVVRDWNDMERIWQYVYSKDQLQTFSEEHPVLLTEAPLNPSKN 120

Query: 498  RERAAEVFFETFNVPALFISMQAVLSLYATGRTTGVVLDSGDGVTHAVPIYEGFAMPHSI 677
            RE+AAEVFFETFNVPALFISMQAVLSLYATGRTTGVVLDSGDGVTHAVPIYEGFAMPHSI
Sbjct: 121  REKAAEVFFETFNVPALFISMQAVLSLYATGRTTGVVLDSGDGVTHAVPIYEGFAMPHSI 180

Query: 678  MRIDIAGRDVSRFLRLYLRKEGYDFHSSSEFEIVKAIKERACYLSINPQKDETLETEKAQ 857
            MR+DIAGRDVSR+LRL LRKEG DFH+S+EFE+V+ IKERACYLSINPQKDE LETEK Q
Sbjct: 181  MRVDIAGRDVSRYLRLLLRKEGADFHTSAEFEVVRTIKERACYLSINPQKDEALETEKVQ 240

Query: 858  YYLPDGSTIEIGPSRFRAPELLFRPDLIGEESEGIHEVLVFAIQKSDMDLRRTLFSNIVL 1037
            Y LPDGST+++GP+RFRAPELLF+PDL+G+ESEG+HEVL FAI KSDMDLRRTLFSNIVL
Sbjct: 241  YTLPDGSTLDVGPARFRAPELLFQPDLVGDESEGLHEVLAFAIHKSDMDLRRTLFSNIVL 300

Query: 1038 SGGSTLFKGFGDRLLSEVKKLAPKDVKIRISAPQERLYSTWIGGSILASLDTFKKMWVSK 1217
            SGGSTLFKGFGDRLLSEVKKLAPKDVKI+ISAPQERLYSTWIGGSILASLDTFKKMWVSK
Sbjct: 301  SGGSTLFKGFGDRLLSEVKKLAPKDVKIKISAPQERLYSTWIGGSILASLDTFKKMWVSK 360

Query: 1218 KEYEEDGARSIHRKTF 1265
            KEYEEDG+R+IHRKTF
Sbjct: 361  KEYEEDGSRAIHRKTF 376


>ref|NP_033738.1| actin, alpha cardiac muscle 1 [Mus musculus].
          Length = 377

 Score =  425 bits (1092), Expect = e-118
 Identities = 198/369 (53%), Positives = 275/369 (74%), Gaps = 4/369 (1%)
 Frame = +3

Query: 171  VVIDNGSGVIKAGFAGDQIPKYCFPNYVGRPKHVRVMAGALEGDIFIGPKAEEHRGLLSI 350
            +V DNGSG++KAGFAGD  P+  FP+ VGRP+H  VM G  + D ++G +A+  RG+L++
Sbjct: 10   LVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 69

Query: 351  RYPMEHGIVKDWNDMERIWQYVYSKDQLQTFSEEHPVLLTEAPLNPRKNRERAAEVFFET 530
            +YP+EHGI+ +W+DME+IW + +  ++L+   EEHP LLTEAPLNP+ NRE+  ++ FET
Sbjct: 70   KYPIEHGIITNWDDMEKIWHHTFY-NELRVAPEEHPTLLTEAPLNPKANREKMTQIMFET 128

Query: 531  FNVPALFISMQAVLSLYATGRTTGVVLDSGDGVTHAVPIYEGFAMPHSIMRIDIAGRDVS 710
            FNVPA+++++QAVLSLYA+GRTTG+VLDSGDGVTH VPIYEG+A+PH+IMR+D+AGRD++
Sbjct: 129  FNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGRDLT 188

Query: 711  RFLRLYLRKEGYDFHSSSEFEIVKAIKERACYLSINPQKDETLETEKA----QYYLPDGS 878
             +L   L + GY F +++E EIV+ IKE+ CY++++ + +       +     Y LPDG 
Sbjct: 189  DYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYELPDGQ 248

Query: 879  TIEIGPSRFRAPELLFRPDLIGEESEGIHEVLVFAIQKSDMDLRRTLFSNIVLSGGSTLF 1058
             I IG  RFR PE LF+P  IG ES GIHE    +I K D+D+R+ L++N VLSGG+T++
Sbjct: 249  VITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVLSGGTTMY 308

Query: 1059 KGFGDRLLSEVKKLAPKDVKIRISAPQERLYSTWIGGSILASLDTFKKMWVSKKEYEEDG 1238
             G  DR+  E+  LAP  +KI+I AP ER YS WIGGSILASL TF++MW+SK+EY+E G
Sbjct: 309  PGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDEAG 368

Query: 1239 ARSIHRKTF 1265
               +HRK F
Sbjct: 369  PSIVHRKCF 377


>ref|NP_033739.1| actin, cytoplasmic 2 [Mus musculus].
          Length = 375

 Score =  425 bits (1092), Expect = e-118
 Identities = 197/369 (53%), Positives = 276/369 (74%), Gaps = 4/369 (1%)
 Frame = +3

Query: 171  VVIDNGSGVIKAGFAGDQIPKYCFPNYVGRPKHVRVMAGALEGDIFIGPKAEEHRGLLSI 350
            +VIDNGSG+ KAGFAGD  P+  FP+ VGRP+H  VM G  + D ++G +A+  RG+L++
Sbjct: 8    LVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 67

Query: 351  RYPMEHGIVKDWNDMERIWQYVYSKDQLQTFSEEHPVLLTEAPLNPRKNRERAAEVFFET 530
            +YP+EHGIV +W+DME+IW + +  ++L+   EEHPVLLTEAPLNP+ NRE+  ++ FET
Sbjct: 68   KYPIEHGIVTNWDDMEKIWHHTFY-NELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 126

Query: 531  FNVPALFISMQAVLSLYATGRTTGVVLDSGDGVTHAVPIYEGFAMPHSIMRIDIAGRDVS 710
            FN PA+++++QAVLSLYA+GRTTG+V+DSGDGVTH VPIYEG+A+PH+I+R+D+AGRD++
Sbjct: 127  FNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLT 186

Query: 711  RFLRLYLRKEGYDFHSSSEFEIVKAIKERACYLSINPQKDETLETEKA----QYYLPDGS 878
             +L   L + GY F +++E EIV+ IKE+ CY++++ +++       +     Y LPDG 
Sbjct: 187  DYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQ 246

Query: 879  TIEIGPSRFRAPELLFRPDLIGEESEGIHEVLVFAIQKSDMDLRRTLFSNIVLSGGSTLF 1058
             I IG  RFR PE LF+P  +G ES GIHE    +I K D+D+R+ L++N VLSGG+T++
Sbjct: 247  VITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLSGGTTMY 306

Query: 1059 KGFGDRLLSEVKKLAPKDVKIRISAPQERLYSTWIGGSILASLDTFKKMWVSKKEYEEDG 1238
             G  DR+  E+  LAP  +KI+I AP ER YS WIGGSILASL TF++MW+SK+EY+E G
Sbjct: 307  PGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESG 366

Query: 1239 ARSIHRKTF 1265
               +HRK F
Sbjct: 367  PSIVHRKCF 375


>ref|NP_031419.1| actin, cytoplasmic 1 [Mus musculus].
          Length = 375

 Score =  424 bits (1091), Expect = e-118
 Identities = 196/369 (53%), Positives = 276/369 (74%), Gaps = 4/369 (1%)
 Frame = +3

Query: 171  VVIDNGSGVIKAGFAGDQIPKYCFPNYVGRPKHVRVMAGALEGDIFIGPKAEEHRGLLSI 350
            +V+DNGSG+ KAGFAGD  P+  FP+ VGRP+H  VM G  + D ++G +A+  RG+L++
Sbjct: 8    LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 67

Query: 351  RYPMEHGIVKDWNDMERIWQYVYSKDQLQTFSEEHPVLLTEAPLNPRKNRERAAEVFFET 530
            +YP+EHGIV +W+DME+IW + +  ++L+   EEHPVLLTEAPLNP+ NRE+  ++ FET
Sbjct: 68   KYPIEHGIVTNWDDMEKIWHHTFY-NELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 126

Query: 531  FNVPALFISMQAVLSLYATGRTTGVVLDSGDGVTHAVPIYEGFAMPHSIMRIDIAGRDVS 710
            FN PA+++++QAVLSLYA+GRTTG+V+DSGDGVTH VPIYEG+A+PH+I+R+D+AGRD++
Sbjct: 127  FNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLT 186

Query: 711  RFLRLYLRKEGYDFHSSSEFEIVKAIKERACYLSINPQKDETLETEKA----QYYLPDGS 878
             +L   L + GY F +++E EIV+ IKE+ CY++++ +++       +     Y LPDG 
Sbjct: 187  DYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQ 246

Query: 879  TIEIGPSRFRAPELLFRPDLIGEESEGIHEVLVFAIQKSDMDLRRTLFSNIVLSGGSTLF 1058
             I IG  RFR PE LF+P  +G ES GIHE    +I K D+D+R+ L++N VLSGG+T++
Sbjct: 247  VITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLSGGTTMY 306

Query: 1059 KGFGDRLLSEVKKLAPKDVKIRISAPQERLYSTWIGGSILASLDTFKKMWVSKKEYEEDG 1238
             G  DR+  E+  LAP  +KI+I AP ER YS WIGGSILASL TF++MW+SK+EY+E G
Sbjct: 307  PGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESG 366

Query: 1239 ARSIHRKTF 1265
               +HRK F
Sbjct: 367  PSIVHRKCF 375


>ref|NP_033736.1| actin, alpha skeletal muscle [Mus musculus].
          Length = 377

 Score =  423 bits (1087), Expect = e-118
 Identities = 196/369 (53%), Positives = 275/369 (74%), Gaps = 4/369 (1%)
 Frame = +3

Query: 171  VVIDNGSGVIKAGFAGDQIPKYCFPNYVGRPKHVRVMAGALEGDIFIGPKAEEHRGLLSI 350
            +V DNGSG++KAGFAGD  P+  FP+ VGRP+H  VM G  + D ++G +A+  RG+L++
Sbjct: 10   LVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 69

Query: 351  RYPMEHGIVKDWNDMERIWQYVYSKDQLQTFSEEHPVLLTEAPLNPRKNRERAAEVFFET 530
            +YP+EHGI+ +W+DME+IW + +  ++L+   EEHP LLTEAPLNP+ NRE+  ++ FET
Sbjct: 70   KYPIEHGIITNWDDMEKIWHHTFY-NELRVAPEEHPTLLTEAPLNPKANREKMTQIMFET 128

Query: 531  FNVPALFISMQAVLSLYATGRTTGVVLDSGDGVTHAVPIYEGFAMPHSIMRIDIAGRDVS 710
            FNVPA+++++QAVLSLYA+GRTTG+VLDSGDGVTH VPIYEG+A+PH+IMR+D+AGRD++
Sbjct: 129  FNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGRDLT 188

Query: 711  RFLRLYLRKEGYDFHSSSEFEIVKAIKERACYLSINPQKDETLETEKA----QYYLPDGS 878
             +L   L + GY F +++E EIV+ IKE+ CY++++ + +       +     Y LPDG 
Sbjct: 189  DYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYELPDGQ 248

Query: 879  TIEIGPSRFRAPELLFRPDLIGEESEGIHEVLVFAIQKSDMDLRRTLFSNIVLSGGSTLF 1058
             I IG  RFR PE LF+P  IG ES GIHE    +I K D+D+R+ L++N V+SGG+T++
Sbjct: 249  VITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVMSGGTTMY 308

Query: 1059 KGFGDRLLSEVKKLAPKDVKIRISAPQERLYSTWIGGSILASLDTFKKMWVSKKEYEEDG 1238
             G  DR+  E+  LAP  +KI+I AP ER YS WIGGSILASL TF++MW++K+EY+E G
Sbjct: 309  PGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWITKQEYDEAG 368

Query: 1239 ARSIHRKTF 1265
               +HRK F
Sbjct: 369  PSIVHRKCF 377


>ref|NP_031418.1| actin, aortic smooth muscle [Mus musculus].
          Length = 377

 Score =  422 bits (1086), Expect = e-118
 Identities = 198/369 (53%), Positives = 274/369 (74%), Gaps = 4/369 (1%)
 Frame = +3

Query: 171  VVIDNGSGVIKAGFAGDQIPKYCFPNYVGRPKHVRVMAGALEGDIFIGPKAEEHRGLLSI 350
            +V DNGSG+ KAGFAGD  P+  FP+ VGRP+H  VM G  + D ++G +A+  RG+L++
Sbjct: 10   LVCDNGSGLCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 69

Query: 351  RYPMEHGIVKDWNDMERIWQYVYSKDQLQTFSEEHPVLLTEAPLNPRKNRERAAEVFFET 530
            +YP+EHGI+ +W+DME+IW + +  ++L+   EEHP LLTEAPLNP+ NRE+  ++ FET
Sbjct: 70   KYPIEHGIITNWDDMEKIWHHSFY-NELRVAPEEHPTLLTEAPLNPKANREKMTQIMFET 128

Query: 531  FNVPALFISMQAVLSLYATGRTTGVVLDSGDGVTHAVPIYEGFAMPHSIMRIDIAGRDVS 710
            FNVPA+++++QAVLSLYA+GRTTG+VLDSGDGVTH VPIYEG+A+PH+IMR+D+AGRD++
Sbjct: 129  FNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGRDLT 188

Query: 711  RFLRLYLRKEGYDFHSSSEFEIVKAIKERACYLSINPQKDETLETEKA----QYYLPDGS 878
             +L   L + GY F +++E EIV+ IKE+ CY++++ + +       +     Y LPDG 
Sbjct: 189  DYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYELPDGQ 248

Query: 879  TIEIGPSRFRAPELLFRPDLIGEESEGIHEVLVFAIQKSDMDLRRTLFSNIVLSGGSTLF 1058
             I IG  RFR PE LF+P  IG ES GIHE    +I K D+D+R+ L++N VLSGG+T++
Sbjct: 249  VITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVLSGGTTMY 308

Query: 1059 KGFGDRLLSEVKKLAPKDVKIRISAPQERLYSTWIGGSILASLDTFKKMWVSKKEYEEDG 1238
             G  DR+  E+  LAP  +KI+I AP ER YS WIGGSILASL TF++MW+SK+EY+E G
Sbjct: 309  PGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDEAG 368

Query: 1239 ARSIHRKTF 1265
               +HRK F
Sbjct: 369  PSIVHRKCF 377


>ref|NP_033740.2| actin, gamma-enteric smooth muscle [Mus musculus].
          Length = 376

 Score =  422 bits (1084), Expect = e-118
 Identities = 198/369 (53%), Positives = 273/369 (73%), Gaps = 4/369 (1%)
 Frame = +3

Query: 171  VVIDNGSGVIKAGFAGDQIPKYCFPNYVGRPKHVRVMAGALEGDIFIGPKAEEHRGLLSI 350
            +V DNGSG+ KAGFAGD  P+  FP+ VGRP+H  VM G  + D ++G +A+  RG+L++
Sbjct: 9    LVCDNGSGLCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 68

Query: 351  RYPMEHGIVKDWNDMERIWQYVYSKDQLQTFSEEHPVLLTEAPLNPRKNRERAAEVFFET 530
            +YP+EHGI+ +W+DME+IW + +  ++L+   EEHP LLTEAPLNP+ NRE+  ++ FET
Sbjct: 69   KYPIEHGIITNWDDMEKIWHHSFY-NELRVAPEEHPTLLTEAPLNPKANREKMTQIMFET 127

Query: 531  FNVPALFISMQAVLSLYATGRTTGVVLDSGDGVTHAVPIYEGFAMPHSIMRIDIAGRDVS 710
            FNVPA+++++QAVLSLYA+GRTTG+VLDSGDGVTH VPIYEG+A+PH+IMR+D+AGRD++
Sbjct: 128  FNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGRDLT 187

Query: 711  RFLRLYLRKEGYDFHSSSEFEIVKAIKERACYLSINPQKDETLETEKA----QYYLPDGS 878
             +L   L + GY F +++E EIV+ IKE+ CY++++ + +       +     Y LPDG 
Sbjct: 188  DYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYELPDGQ 247

Query: 879  TIEIGPSRFRAPELLFRPDLIGEESEGIHEVLVFAIQKSDMDLRRTLFSNIVLSGGSTLF 1058
             I IG  RFR PE LF+P  IG ES GIHE    +I K D+D+R+ L++N VLSGG+T++
Sbjct: 248  VITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVLSGGTTMY 307

Query: 1059 KGFGDRLLSEVKKLAPKDVKIRISAPQERLYSTWIGGSILASLDTFKKMWVSKKEYEEDG 1238
             G  DR+  E+  LAP  +KI+I AP ER YS WIGGSILASL TF++MW+SK EY+E G
Sbjct: 308  PGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKPEYDEAG 367

Query: 1239 ARSIHRKTF 1265
               +HRK F
Sbjct: 368  PSIVHRKCF 376


>ref|NP_780706.1| beta-actin-like protein 2 [Mus musculus].
          Length = 376

 Score =  419 bits (1077), Expect = e-117
 Identities = 191/369 (51%), Positives = 275/369 (74%), Gaps = 4/369 (1%)
 Frame = +3

Query: 171  VVIDNGSGVIKAGFAGDQIPKYCFPNYVGRPKHVRVMAGALEGDIFIGPKAEEHRGLLSI 350
            +V+DNGSG+ KAGF GD  P+  FP+ VGRP+H  VM G  + D ++G +A+  RG+L++
Sbjct: 9    LVVDNGSGMCKAGFGGDDAPRAVFPSMVGRPRHQGVMVGMGQKDCYVGDEAQSKRGILTL 68

Query: 351  RYPMEHGIVKDWNDMERIWQYVYSKDQLQTFSEEHPVLLTEAPLNPRKNRERAAEVFFET 530
            +YP+EHG+V +W+DME+IW + +  ++L+   +EHP+LLTEAPLNP+ NRE+  ++ FE 
Sbjct: 69   KYPIEHGVVTNWDDMEKIWYHTFY-NELRVAPDEHPILLTEAPLNPKINREKMTQIMFEA 127

Query: 531  FNVPALFISMQAVLSLYATGRTTGVVLDSGDGVTHAVPIYEGFAMPHSIMRIDIAGRDVS 710
            FN PA+++++QAVLSLYA+GRTTG+V+DSGDGVTH VPIYEG+A+PH+I+R+D+AGRD++
Sbjct: 128  FNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLT 187

Query: 711  RFLRLYLRKEGYDFHSSSEFEIVKAIKERACYLSINPQKDETLETEKA----QYYLPDGS 878
             +L   L + GY+F +++E EIV+ +KE+ CY++++ +++       +     Y LPDG 
Sbjct: 188  DYLMKILTERGYNFTTTAEREIVRDVKEKLCYVALDFEQEMVTAAASSSLERSYELPDGQ 247

Query: 879  TIEIGPSRFRAPELLFRPDLIGEESEGIHEVLVFAIQKSDMDLRRTLFSNIVLSGGSTLF 1058
             I IG  RFR PE +F+P  +G ES GIHE    +I K D+D+R+ LF+N VLSGGST++
Sbjct: 248  VITIGNERFRCPEAIFQPSFLGIESRGIHETTFNSIMKCDVDIRKDLFANTVLSGGSTMY 307

Query: 1059 KGFGDRLLSEVKKLAPKDVKIRISAPQERLYSTWIGGSILASLDTFKKMWVSKKEYEEDG 1238
             G  DR+  E+  LAP  +KI+I AP ER YS WIGGSILASL TF++MW+SK+EY+E G
Sbjct: 308  PGIADRMQKEIVTLAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDEAG 367

Query: 1239 ARSIHRKTF 1265
               +HRK F
Sbjct: 368  PPIVHRKCF 376


>ref|XP_003084637.1| PREDICTED: actin, cytoplasmic 2-like [Mus musculus].
          Length = 389

 Score =  414 bits (1065), Expect = e-115
 Identities = 193/361 (53%), Positives = 271/361 (75%), Gaps = 4/361 (1%)
 Frame = +3

Query: 171  VVIDNGSGVIKAGFAGDQIPKYCFPNYVGRPKHVRVMAGALEGDIFIGPKAEEHRGLLSI 350
            +VIDNGSG+ KAGFAGD  P+  FP+ VGRP+H  VM G  + D ++G +A+  RG+L++
Sbjct: 8    LVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 67

Query: 351  RYPMEHGIVKDWNDMERIWQYVYSKDQLQTFSEEHPVLLTEAPLNPRKNRERAAEVFFET 530
            +YP+EHGIV +W+DME+IW + +  ++L+   EEHPVLLTEAPLNP+ NRE+  ++ FET
Sbjct: 68   KYPIEHGIVTNWDDMEKIWHHTFY-NELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 126

Query: 531  FNVPALFISMQAVLSLYATGRTTGVVLDSGDGVTHAVPIYEGFAMPHSIMRIDIAGRDVS 710
            FN PA+++++QAVLSLYA+GRTTG+V+DSGDGVTH VPIYEG+A+PH+I+R+D+AGRD++
Sbjct: 127  FNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLT 186

Query: 711  RFLRLYLRKEGYDFHSSSEFEIVKAIKERACYLSINPQKDETLETEKA----QYYLPDGS 878
             +L   L + GY F +++E EIV+ IKE+ CY++++ +++       +     Y LPDG 
Sbjct: 187  DYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQ 246

Query: 879  TIEIGPSRFRAPELLFRPDLIGEESEGIHEVLVFAIQKSDMDLRRTLFSNIVLSGGSTLF 1058
             I IG  RFR PE LF+P  +G ES GIHE    +I K D+D+R+ L++N VLSGG+T++
Sbjct: 247  VITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLSGGTTMY 306

Query: 1059 KGFGDRLLSEVKKLAPKDVKIRISAPQERLYSTWIGGSILASLDTFKKMWVSKKEYEEDG 1238
             G  DR+  E+  LAP  +KI+I AP ER YS WIGGSILASL TF++MW+SK+EY+E  
Sbjct: 307  PGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDEXQ 366

Query: 1239 A 1241
            A
Sbjct: 367  A 367


  Database: RefSeq49_MP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 15,617,559
  Number of sequences in database:  30,036
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 30036
Number of Hits to DB: 92,925,719
Number of extensions: 2721087
Number of successful extensions: 9470
Number of sequences better than 1.0e-05: 30
Number of HSP's gapped: 9364
Number of HSP's successfully gapped: 33
Length of query: 867
Length of database: 15,617,559
Length adjustment: 110
Effective length of query: 757
Effective length of database: 12,313,599
Effective search space: 9321394443
Effective search space used: 9321394443
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-013083
         (2602 letters)

Database: RefSeq49_HP.fasta 
           32,964 sequences; 18,297,164 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_005727.1| alpha-centractin [Homo sapiens].                     755   0.0  
Alignment   gi|NP_005726.1| beta-centractin [Homo sapiens].                      709   0.0  
Alignment   gi|NP_001186883.1| actin, cytoplasmic 2 [Homo sapiens].              425   e-118
Alignment   gi|NP_005150.1| actin, alpha cardiac muscle 1 proprotein [Homo ...   425   e-118
Alignment   gi|NP_001605.1| actin, cytoplasmic 2 [Homo sapiens].                 425   e-118
Alignment   gi|NP_001092.1| actin, cytoplasmic 1 [Homo sapiens].                 424   e-118
Alignment   gi|NP_001091.1| actin, alpha skeletal muscle [Homo sapiens].         423   e-118
Alignment   gi|NP_001604.1| actin, aortic smooth muscle [Homo sapiens].          422   e-118
Alignment   gi|NP_001135417.1| actin, aortic smooth muscle [Homo sapiens].       422   e-118
Alignment   gi|NP_001606.1| actin, gamma-enteric smooth muscle isoform 1 pr...   422   e-117

>ref|NP_005727.1| alpha-centractin [Homo sapiens].
          Length = 376

 Score =  755 bits (1949), Expect = 0.0
 Identities = 376/376 (100%), Positives = 376/376 (100%)
 Frame = +3

Query: 138  MESYDVIANQPVVIDNGSGVIKAGFAGDQIPKYCFPNYVGRPKHVRVMAGALEGDIFIGP 317
            MESYDVIANQPVVIDNGSGVIKAGFAGDQIPKYCFPNYVGRPKHVRVMAGALEGDIFIGP
Sbjct: 1    MESYDVIANQPVVIDNGSGVIKAGFAGDQIPKYCFPNYVGRPKHVRVMAGALEGDIFIGP 60

Query: 318  KAEEHRGLLSIRYPMEHGIVKDWNDMERIWQYVYSKDQLQTFSEEHPVLLTEAPLNPRKN 497
            KAEEHRGLLSIRYPMEHGIVKDWNDMERIWQYVYSKDQLQTFSEEHPVLLTEAPLNPRKN
Sbjct: 61   KAEEHRGLLSIRYPMEHGIVKDWNDMERIWQYVYSKDQLQTFSEEHPVLLTEAPLNPRKN 120

Query: 498  RERAAEVFFETFNVPALFISMQAVLSLYATGRTTGVVLDSGDGVTHAVPIYEGFAMPHSI 677
            RERAAEVFFETFNVPALFISMQAVLSLYATGRTTGVVLDSGDGVTHAVPIYEGFAMPHSI
Sbjct: 121  RERAAEVFFETFNVPALFISMQAVLSLYATGRTTGVVLDSGDGVTHAVPIYEGFAMPHSI 180

Query: 678  MRIDIAGRDVSRFLRLYLRKEGYDFHSSSEFEIVKAIKERACYLSINPQKDETLETEKAQ 857
            MRIDIAGRDVSRFLRLYLRKEGYDFHSSSEFEIVKAIKERACYLSINPQKDETLETEKAQ
Sbjct: 181  MRIDIAGRDVSRFLRLYLRKEGYDFHSSSEFEIVKAIKERACYLSINPQKDETLETEKAQ 240

Query: 858  YYLPDGSTIEIGPSRFRAPELLFRPDLIGEESEGIHEVLVFAIQKSDMDLRRTLFSNIVL 1037
            YYLPDGSTIEIGPSRFRAPELLFRPDLIGEESEGIHEVLVFAIQKSDMDLRRTLFSNIVL
Sbjct: 241  YYLPDGSTIEIGPSRFRAPELLFRPDLIGEESEGIHEVLVFAIQKSDMDLRRTLFSNIVL 300

Query: 1038 SGGSTLFKGFGDRLLSEVKKLAPKDVKIRISAPQERLYSTWIGGSILASLDTFKKMWVSK 1217
            SGGSTLFKGFGDRLLSEVKKLAPKDVKIRISAPQERLYSTWIGGSILASLDTFKKMWVSK
Sbjct: 301  SGGSTLFKGFGDRLLSEVKKLAPKDVKIRISAPQERLYSTWIGGSILASLDTFKKMWVSK 360

Query: 1218 KEYEEDGARSIHRKTF 1265
            KEYEEDGARSIHRKTF
Sbjct: 361  KEYEEDGARSIHRKTF 376


>ref|NP_005726.1| beta-centractin [Homo sapiens].
          Length = 376

 Score =  709 bits (1831), Expect = 0.0
 Identities = 340/376 (90%), Positives = 367/376 (97%)
 Frame = +3

Query: 138  MESYDVIANQPVVIDNGSGVIKAGFAGDQIPKYCFPNYVGRPKHVRVMAGALEGDIFIGP 317
            MESYD+IANQPVVIDNGSGVIKAGFAGDQIPKYCFPNYVGRPKH+RVMAGALEGD+FIGP
Sbjct: 1    MESYDIIANQPVVIDNGSGVIKAGFAGDQIPKYCFPNYVGRPKHMRVMAGALEGDLFIGP 60

Query: 318  KAEEHRGLLSIRYPMEHGIVKDWNDMERIWQYVYSKDQLQTFSEEHPVLLTEAPLNPRKN 497
            KAEEHRGLL+IRYPMEHG+V+DWNDMERIWQYVYSKDQLQTFSEEHPVLLTEAPLNP KN
Sbjct: 61   KAEEHRGLLTIRYPMEHGVVRDWNDMERIWQYVYSKDQLQTFSEEHPVLLTEAPLNPSKN 120

Query: 498  RERAAEVFFETFNVPALFISMQAVLSLYATGRTTGVVLDSGDGVTHAVPIYEGFAMPHSI 677
            RE+AAEVFFETFNVPALFISMQAVLSLYATGRTTGVVLDSGDGVTHAVPIYEGFAMPHSI
Sbjct: 121  REKAAEVFFETFNVPALFISMQAVLSLYATGRTTGVVLDSGDGVTHAVPIYEGFAMPHSI 180

Query: 678  MRIDIAGRDVSRFLRLYLRKEGYDFHSSSEFEIVKAIKERACYLSINPQKDETLETEKAQ 857
            MR+DIAGRDVSR+LRL LRKEG DFH+S+EFE+V+ IKERACYLSINPQKDE LETEK Q
Sbjct: 181  MRVDIAGRDVSRYLRLLLRKEGVDFHTSAEFEVVRTIKERACYLSINPQKDEALETEKVQ 240

Query: 858  YYLPDGSTIEIGPSRFRAPELLFRPDLIGEESEGIHEVLVFAIQKSDMDLRRTLFSNIVL 1037
            Y LPDGST+++GP+RFRAPELLF+PDL+G+ESEG+HEV+ FAI KSDMDLRRTLF+NIVL
Sbjct: 241  YTLPDGSTLDVGPARFRAPELLFQPDLVGDESEGLHEVVAFAIHKSDMDLRRTLFANIVL 300

Query: 1038 SGGSTLFKGFGDRLLSEVKKLAPKDVKIRISAPQERLYSTWIGGSILASLDTFKKMWVSK 1217
            SGGSTLFKGFGDRLLSEVKKLAPKD+KI+ISAPQERLYSTWIGGSILASLDTFKKMWVSK
Sbjct: 301  SGGSTLFKGFGDRLLSEVKKLAPKDIKIKISAPQERLYSTWIGGSILASLDTFKKMWVSK 360

Query: 1218 KEYEEDGARSIHRKTF 1265
            KEYEEDG+R+IHRKTF
Sbjct: 361  KEYEEDGSRAIHRKTF 376


>ref|NP_001186883.1| actin, cytoplasmic 2 [Homo sapiens].
          Length = 375

 Score =  425 bits (1092), Expect = e-118
 Identities = 197/369 (53%), Positives = 276/369 (74%), Gaps = 4/369 (1%)
 Frame = +3

Query: 171  VVIDNGSGVIKAGFAGDQIPKYCFPNYVGRPKHVRVMAGALEGDIFIGPKAEEHRGLLSI 350
            +VIDNGSG+ KAGFAGD  P+  FP+ VGRP+H  VM G  + D ++G +A+  RG+L++
Sbjct: 8    LVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 67

Query: 351  RYPMEHGIVKDWNDMERIWQYVYSKDQLQTFSEEHPVLLTEAPLNPRKNRERAAEVFFET 530
            +YP+EHGIV +W+DME+IW + +  ++L+   EEHPVLLTEAPLNP+ NRE+  ++ FET
Sbjct: 68   KYPIEHGIVTNWDDMEKIWHHTFY-NELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 126

Query: 531  FNVPALFISMQAVLSLYATGRTTGVVLDSGDGVTHAVPIYEGFAMPHSIMRIDIAGRDVS 710
            FN PA+++++QAVLSLYA+GRTTG+V+DSGDGVTH VPIYEG+A+PH+I+R+D+AGRD++
Sbjct: 127  FNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLT 186

Query: 711  RFLRLYLRKEGYDFHSSSEFEIVKAIKERACYLSINPQKDETLETEKA----QYYLPDGS 878
             +L   L + GY F +++E EIV+ IKE+ CY++++ +++       +     Y LPDG 
Sbjct: 187  DYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQ 246

Query: 879  TIEIGPSRFRAPELLFRPDLIGEESEGIHEVLVFAIQKSDMDLRRTLFSNIVLSGGSTLF 1058
             I IG  RFR PE LF+P  +G ES GIHE    +I K D+D+R+ L++N VLSGG+T++
Sbjct: 247  VITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLSGGTTMY 306

Query: 1059 KGFGDRLLSEVKKLAPKDVKIRISAPQERLYSTWIGGSILASLDTFKKMWVSKKEYEEDG 1238
             G  DR+  E+  LAP  +KI+I AP ER YS WIGGSILASL TF++MW+SK+EY+E G
Sbjct: 307  PGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESG 366

Query: 1239 ARSIHRKTF 1265
               +HRK F
Sbjct: 367  PSIVHRKCF 375


>ref|NP_005150.1| actin, alpha cardiac muscle 1 proprotein [Homo sapiens].
          Length = 377

 Score =  425 bits (1092), Expect = e-118
 Identities = 198/369 (53%), Positives = 275/369 (74%), Gaps = 4/369 (1%)
 Frame = +3

Query: 171  VVIDNGSGVIKAGFAGDQIPKYCFPNYVGRPKHVRVMAGALEGDIFIGPKAEEHRGLLSI 350
            +V DNGSG++KAGFAGD  P+  FP+ VGRP+H  VM G  + D ++G +A+  RG+L++
Sbjct: 10   LVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 69

Query: 351  RYPMEHGIVKDWNDMERIWQYVYSKDQLQTFSEEHPVLLTEAPLNPRKNRERAAEVFFET 530
            +YP+EHGI+ +W+DME+IW + +  ++L+   EEHP LLTEAPLNP+ NRE+  ++ FET
Sbjct: 70   KYPIEHGIITNWDDMEKIWHHTFY-NELRVAPEEHPTLLTEAPLNPKANREKMTQIMFET 128

Query: 531  FNVPALFISMQAVLSLYATGRTTGVVLDSGDGVTHAVPIYEGFAMPHSIMRIDIAGRDVS 710
            FNVPA+++++QAVLSLYA+GRTTG+VLDSGDGVTH VPIYEG+A+PH+IMR+D+AGRD++
Sbjct: 129  FNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGRDLT 188

Query: 711  RFLRLYLRKEGYDFHSSSEFEIVKAIKERACYLSINPQKDETLETEKA----QYYLPDGS 878
             +L   L + GY F +++E EIV+ IKE+ CY++++ + +       +     Y LPDG 
Sbjct: 189  DYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYELPDGQ 248

Query: 879  TIEIGPSRFRAPELLFRPDLIGEESEGIHEVLVFAIQKSDMDLRRTLFSNIVLSGGSTLF 1058
             I IG  RFR PE LF+P  IG ES GIHE    +I K D+D+R+ L++N VLSGG+T++
Sbjct: 249  VITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVLSGGTTMY 308

Query: 1059 KGFGDRLLSEVKKLAPKDVKIRISAPQERLYSTWIGGSILASLDTFKKMWVSKKEYEEDG 1238
             G  DR+  E+  LAP  +KI+I AP ER YS WIGGSILASL TF++MW+SK+EY+E G
Sbjct: 309  PGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDEAG 368

Query: 1239 ARSIHRKTF 1265
               +HRK F
Sbjct: 369  PSIVHRKCF 377


>ref|NP_001605.1| actin, cytoplasmic 2 [Homo sapiens].
          Length = 375

 Score =  425 bits (1092), Expect = e-118
 Identities = 197/369 (53%), Positives = 276/369 (74%), Gaps = 4/369 (1%)
 Frame = +3

Query: 171  VVIDNGSGVIKAGFAGDQIPKYCFPNYVGRPKHVRVMAGALEGDIFIGPKAEEHRGLLSI 350
            +VIDNGSG+ KAGFAGD  P+  FP+ VGRP+H  VM G  + D ++G +A+  RG+L++
Sbjct: 8    LVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 67

Query: 351  RYPMEHGIVKDWNDMERIWQYVYSKDQLQTFSEEHPVLLTEAPLNPRKNRERAAEVFFET 530
            +YP+EHGIV +W+DME+IW + +  ++L+   EEHPVLLTEAPLNP+ NRE+  ++ FET
Sbjct: 68   KYPIEHGIVTNWDDMEKIWHHTFY-NELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 126

Query: 531  FNVPALFISMQAVLSLYATGRTTGVVLDSGDGVTHAVPIYEGFAMPHSIMRIDIAGRDVS 710
            FN PA+++++QAVLSLYA+GRTTG+V+DSGDGVTH VPIYEG+A+PH+I+R+D+AGRD++
Sbjct: 127  FNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLT 186

Query: 711  RFLRLYLRKEGYDFHSSSEFEIVKAIKERACYLSINPQKDETLETEKA----QYYLPDGS 878
             +L   L + GY F +++E EIV+ IKE+ CY++++ +++       +     Y LPDG 
Sbjct: 187  DYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQ 246

Query: 879  TIEIGPSRFRAPELLFRPDLIGEESEGIHEVLVFAIQKSDMDLRRTLFSNIVLSGGSTLF 1058
             I IG  RFR PE LF+P  +G ES GIHE    +I K D+D+R+ L++N VLSGG+T++
Sbjct: 247  VITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLSGGTTMY 306

Query: 1059 KGFGDRLLSEVKKLAPKDVKIRISAPQERLYSTWIGGSILASLDTFKKMWVSKKEYEEDG 1238
             G  DR+  E+  LAP  +KI+I AP ER YS WIGGSILASL TF++MW+SK+EY+E G
Sbjct: 307  PGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESG 366

Query: 1239 ARSIHRKTF 1265
               +HRK F
Sbjct: 367  PSIVHRKCF 375


>ref|NP_001092.1| actin, cytoplasmic 1 [Homo sapiens].
          Length = 375

 Score =  424 bits (1091), Expect = e-118
 Identities = 196/369 (53%), Positives = 276/369 (74%), Gaps = 4/369 (1%)
 Frame = +3

Query: 171  VVIDNGSGVIKAGFAGDQIPKYCFPNYVGRPKHVRVMAGALEGDIFIGPKAEEHRGLLSI 350
            +V+DNGSG+ KAGFAGD  P+  FP+ VGRP+H  VM G  + D ++G +A+  RG+L++
Sbjct: 8    LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 67

Query: 351  RYPMEHGIVKDWNDMERIWQYVYSKDQLQTFSEEHPVLLTEAPLNPRKNRERAAEVFFET 530
            +YP+EHGIV +W+DME+IW + +  ++L+   EEHPVLLTEAPLNP+ NRE+  ++ FET
Sbjct: 68   KYPIEHGIVTNWDDMEKIWHHTFY-NELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 126

Query: 531  FNVPALFISMQAVLSLYATGRTTGVVLDSGDGVTHAVPIYEGFAMPHSIMRIDIAGRDVS 710
            FN PA+++++QAVLSLYA+GRTTG+V+DSGDGVTH VPIYEG+A+PH+I+R+D+AGRD++
Sbjct: 127  FNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLT 186

Query: 711  RFLRLYLRKEGYDFHSSSEFEIVKAIKERACYLSINPQKDETLETEKA----QYYLPDGS 878
             +L   L + GY F +++E EIV+ IKE+ CY++++ +++       +     Y LPDG 
Sbjct: 187  DYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQ 246

Query: 879  TIEIGPSRFRAPELLFRPDLIGEESEGIHEVLVFAIQKSDMDLRRTLFSNIVLSGGSTLF 1058
             I IG  RFR PE LF+P  +G ES GIHE    +I K D+D+R+ L++N VLSGG+T++
Sbjct: 247  VITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLSGGTTMY 306

Query: 1059 KGFGDRLLSEVKKLAPKDVKIRISAPQERLYSTWIGGSILASLDTFKKMWVSKKEYEEDG 1238
             G  DR+  E+  LAP  +KI+I AP ER YS WIGGSILASL TF++MW+SK+EY+E G
Sbjct: 307  PGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESG 366

Query: 1239 ARSIHRKTF 1265
               +HRK F
Sbjct: 367  PSIVHRKCF 375


>ref|NP_001091.1| actin, alpha skeletal muscle [Homo sapiens].
          Length = 377

 Score =  423 bits (1087), Expect = e-118
 Identities = 196/369 (53%), Positives = 275/369 (74%), Gaps = 4/369 (1%)
 Frame = +3

Query: 171  VVIDNGSGVIKAGFAGDQIPKYCFPNYVGRPKHVRVMAGALEGDIFIGPKAEEHRGLLSI 350
            +V DNGSG++KAGFAGD  P+  FP+ VGRP+H  VM G  + D ++G +A+  RG+L++
Sbjct: 10   LVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 69

Query: 351  RYPMEHGIVKDWNDMERIWQYVYSKDQLQTFSEEHPVLLTEAPLNPRKNRERAAEVFFET 530
            +YP+EHGI+ +W+DME+IW + +  ++L+   EEHP LLTEAPLNP+ NRE+  ++ FET
Sbjct: 70   KYPIEHGIITNWDDMEKIWHHTFY-NELRVAPEEHPTLLTEAPLNPKANREKMTQIMFET 128

Query: 531  FNVPALFISMQAVLSLYATGRTTGVVLDSGDGVTHAVPIYEGFAMPHSIMRIDIAGRDVS 710
            FNVPA+++++QAVLSLYA+GRTTG+VLDSGDGVTH VPIYEG+A+PH+IMR+D+AGRD++
Sbjct: 129  FNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGRDLT 188

Query: 711  RFLRLYLRKEGYDFHSSSEFEIVKAIKERACYLSINPQKDETLETEKA----QYYLPDGS 878
             +L   L + GY F +++E EIV+ IKE+ CY++++ + +       +     Y LPDG 
Sbjct: 189  DYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYELPDGQ 248

Query: 879  TIEIGPSRFRAPELLFRPDLIGEESEGIHEVLVFAIQKSDMDLRRTLFSNIVLSGGSTLF 1058
             I IG  RFR PE LF+P  IG ES GIHE    +I K D+D+R+ L++N V+SGG+T++
Sbjct: 249  VITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVMSGGTTMY 308

Query: 1059 KGFGDRLLSEVKKLAPKDVKIRISAPQERLYSTWIGGSILASLDTFKKMWVSKKEYEEDG 1238
             G  DR+  E+  LAP  +KI+I AP ER YS WIGGSILASL TF++MW++K+EY+E G
Sbjct: 309  PGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWITKQEYDEAG 368

Query: 1239 ARSIHRKTF 1265
               +HRK F
Sbjct: 369  PSIVHRKCF 377


>ref|NP_001604.1| actin, aortic smooth muscle [Homo sapiens].
          Length = 377

 Score =  422 bits (1086), Expect = e-118
 Identities = 198/369 (53%), Positives = 274/369 (74%), Gaps = 4/369 (1%)
 Frame = +3

Query: 171  VVIDNGSGVIKAGFAGDQIPKYCFPNYVGRPKHVRVMAGALEGDIFIGPKAEEHRGLLSI 350
            +V DNGSG+ KAGFAGD  P+  FP+ VGRP+H  VM G  + D ++G +A+  RG+L++
Sbjct: 10   LVCDNGSGLCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 69

Query: 351  RYPMEHGIVKDWNDMERIWQYVYSKDQLQTFSEEHPVLLTEAPLNPRKNRERAAEVFFET 530
            +YP+EHGI+ +W+DME+IW + +  ++L+   EEHP LLTEAPLNP+ NRE+  ++ FET
Sbjct: 70   KYPIEHGIITNWDDMEKIWHHSFY-NELRVAPEEHPTLLTEAPLNPKANREKMTQIMFET 128

Query: 531  FNVPALFISMQAVLSLYATGRTTGVVLDSGDGVTHAVPIYEGFAMPHSIMRIDIAGRDVS 710
            FNVPA+++++QAVLSLYA+GRTTG+VLDSGDGVTH VPIYEG+A+PH+IMR+D+AGRD++
Sbjct: 129  FNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGRDLT 188

Query: 711  RFLRLYLRKEGYDFHSSSEFEIVKAIKERACYLSINPQKDETLETEKA----QYYLPDGS 878
             +L   L + GY F +++E EIV+ IKE+ CY++++ + +       +     Y LPDG 
Sbjct: 189  DYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYELPDGQ 248

Query: 879  TIEIGPSRFRAPELLFRPDLIGEESEGIHEVLVFAIQKSDMDLRRTLFSNIVLSGGSTLF 1058
             I IG  RFR PE LF+P  IG ES GIHE    +I K D+D+R+ L++N VLSGG+T++
Sbjct: 249  VITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVLSGGTTMY 308

Query: 1059 KGFGDRLLSEVKKLAPKDVKIRISAPQERLYSTWIGGSILASLDTFKKMWVSKKEYEEDG 1238
             G  DR+  E+  LAP  +KI+I AP ER YS WIGGSILASL TF++MW+SK+EY+E G
Sbjct: 309  PGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDEAG 368

Query: 1239 ARSIHRKTF 1265
               +HRK F
Sbjct: 369  PSIVHRKCF 377


>ref|NP_001135417.1| actin, aortic smooth muscle [Homo sapiens].
          Length = 377

 Score =  422 bits (1086), Expect = e-118
 Identities = 198/369 (53%), Positives = 274/369 (74%), Gaps = 4/369 (1%)
 Frame = +3

Query: 171  VVIDNGSGVIKAGFAGDQIPKYCFPNYVGRPKHVRVMAGALEGDIFIGPKAEEHRGLLSI 350
            +V DNGSG+ KAGFAGD  P+  FP+ VGRP+H  VM G  + D ++G +A+  RG+L++
Sbjct: 10   LVCDNGSGLCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 69

Query: 351  RYPMEHGIVKDWNDMERIWQYVYSKDQLQTFSEEHPVLLTEAPLNPRKNRERAAEVFFET 530
            +YP+EHGI+ +W+DME+IW + +  ++L+   EEHP LLTEAPLNP+ NRE+  ++ FET
Sbjct: 70   KYPIEHGIITNWDDMEKIWHHSFY-NELRVAPEEHPTLLTEAPLNPKANREKMTQIMFET 128

Query: 531  FNVPALFISMQAVLSLYATGRTTGVVLDSGDGVTHAVPIYEGFAMPHSIMRIDIAGRDVS 710
            FNVPA+++++QAVLSLYA+GRTTG+VLDSGDGVTH VPIYEG+A+PH+IMR+D+AGRD++
Sbjct: 129  FNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGRDLT 188

Query: 711  RFLRLYLRKEGYDFHSSSEFEIVKAIKERACYLSINPQKDETLETEKA----QYYLPDGS 878
             +L   L + GY F +++E EIV+ IKE+ CY++++ + +       +     Y LPDG 
Sbjct: 189  DYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYELPDGQ 248

Query: 879  TIEIGPSRFRAPELLFRPDLIGEESEGIHEVLVFAIQKSDMDLRRTLFSNIVLSGGSTLF 1058
             I IG  RFR PE LF+P  IG ES GIHE    +I K D+D+R+ L++N VLSGG+T++
Sbjct: 249  VITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVLSGGTTMY 308

Query: 1059 KGFGDRLLSEVKKLAPKDVKIRISAPQERLYSTWIGGSILASLDTFKKMWVSKKEYEEDG 1238
             G  DR+  E+  LAP  +KI+I AP ER YS WIGGSILASL TF++MW+SK+EY+E G
Sbjct: 309  PGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDEAG 368

Query: 1239 ARSIHRKTF 1265
               +HRK F
Sbjct: 369  PSIVHRKCF 377


>ref|NP_001606.1| actin, gamma-enteric smooth muscle isoform 1 precursor [Homo
            sapiens].
          Length = 376

 Score =  422 bits (1084), Expect = e-117
 Identities = 198/369 (53%), Positives = 273/369 (73%), Gaps = 4/369 (1%)
 Frame = +3

Query: 171  VVIDNGSGVIKAGFAGDQIPKYCFPNYVGRPKHVRVMAGALEGDIFIGPKAEEHRGLLSI 350
            +V DNGSG+ KAGFAGD  P+  FP+ VGRP+H  VM G  + D ++G +A+  RG+L++
Sbjct: 9    LVCDNGSGLCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 68

Query: 351  RYPMEHGIVKDWNDMERIWQYVYSKDQLQTFSEEHPVLLTEAPLNPRKNRERAAEVFFET 530
            +YP+EHGI+ +W+DME+IW + +  ++L+   EEHP LLTEAPLNP+ NRE+  ++ FET
Sbjct: 69   KYPIEHGIITNWDDMEKIWHHSFY-NELRVAPEEHPTLLTEAPLNPKANREKMTQIMFET 127

Query: 531  FNVPALFISMQAVLSLYATGRTTGVVLDSGDGVTHAVPIYEGFAMPHSIMRIDIAGRDVS 710
            FNVPA+++++QAVLSLYA+GRTTG+VLDSGDGVTH VPIYEG+A+PH+IMR+D+AGRD++
Sbjct: 128  FNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGRDLT 187

Query: 711  RFLRLYLRKEGYDFHSSSEFEIVKAIKERACYLSINPQKDETLETEKA----QYYLPDGS 878
             +L   L + GY F +++E EIV+ IKE+ CY++++ + +       +     Y LPDG 
Sbjct: 188  DYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYELPDGQ 247

Query: 879  TIEIGPSRFRAPELLFRPDLIGEESEGIHEVLVFAIQKSDMDLRRTLFSNIVLSGGSTLF 1058
             I IG  RFR PE LF+P  IG ES GIHE    +I K D+D+R+ L++N VLSGG+T++
Sbjct: 248  VITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVLSGGTTMY 307

Query: 1059 KGFGDRLLSEVKKLAPKDVKIRISAPQERLYSTWIGGSILASLDTFKKMWVSKKEYEEDG 1238
             G  DR+  E+  LAP  +KI+I AP ER YS WIGGSILASL TF++MW+SK EY+E G
Sbjct: 308  PGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKPEYDEAG 367

Query: 1239 ARSIHRKTF 1265
               +HRK F
Sbjct: 368  PSIVHRKCF 376


  Database: RefSeq49_HP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 18,297,164
  Number of sequences in database:  32,964
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 32964
Number of Hits to DB: 110,470,884
Number of extensions: 3293476
Number of successful extensions: 11766
Number of sequences better than 1.0e-05: 38
Number of HSP's gapped: 11648
Number of HSP's successfully gapped: 44
Length of query: 867
Length of database: 18,297,164
Length adjustment: 111
Effective length of query: 756
Effective length of database: 14,638,160
Effective search space: 11066448960
Effective search space used: 11066448960
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)

BLASTN 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-013083
         (2602 letters)

Database: Sscrofa_10.2.fasta 
           4582 sequences; 2,808,509,378 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Sscrofa_Chr14                                                        2147   0.0  
Sscrofa_Chr03                                                         161   2e-36
Sscrofa_Chr12                                                          60   6e-06

>Sscrofa_Chr14 
||          Length = 153851969

 Score = 2147 bits (1083), Expect = 0.0
 Identities = 1166/1204 (96%), Gaps = 1/1204 (0%)
 Strand = Plus / Minus

                                                                             
Query: 1391      cgcatacaagagtgccgtgtggcccggggatcccagggatcccggggcccagaaaggacg 1450
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123337179 cgcatacaagagtgccgtgtggcccggggatcccagggatcccggggcccagaaaggacg 123337120

                                                                             
Query: 1451      atgaactacccacgatggtgacggcctgagacctggggttgaccactaactggcccctga 1510
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123337119 atgaactacccacgatggtgacggcctgagacctggggttgaccactaactggcccctga 123337060

                                                                             
Query: 1511      cagggaagagtggctgccagagggccccactccgtcagctgggcctttgtctggctgtgt 1570
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123337059 cagggaagagtggctgccagagggccccactccgtcagctgggcctttgtctggctgtgt 123337000

                                                                             
Query: 1571      agggctgtgttgactaccatggggagacagagggaggtaagcccaacccctgggagacct 1630
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123336999 agggctgtgttgactaccatggggagacagagggaggtaagcccaacccctgggagacct 123336940

                                                                             
Query: 1631      tgctgctgcccatcctaggctgggccagtnnnnnnnnnnnnnnnnnnngggtgccctgca 1690
                 |||||||||||||||||||||||||||||                   ||||||||||||
Sbjct: 123336939 tgctgctgcccatcctaggctgggccagtcccacccccaccccacccagggtgccctgca 123336880

                                                                             
Query: 1691      gcccgaggcagctgctgcctccccttgctcatcattctgctctcaatgcctctggatcat 1750
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123336879 gcccgaggcagctgctgcctccccttgctcatcattctgctctcaatgcctctggatcat 123336820

                                                                             
Query: 1751      ggatggaggcctggggccagggttgagttctgtctggttttgttgcagtttgggtttaga 1810
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123336819 ggatggaggcctggggccagggttgagttctgtctggttttgttgcagtttgggtttaga 123336760

                                                                             
Query: 1811      aggctggagaagcactccagcagttattactgagactttggggtcagaagggggcaggat 1870
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123336759 aggctggagaagcactccagcagttattactgagactttggggtcagaagggggcaggat 123336700

                                                                             
Query: 1871      gccctcaacttcacctggggaccaggaccacactgggcatttgaggtgggcaggagtagt 1930
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123336699 gccctcaacttcacctggggaccaggaccacactgggcatttgaggtgggcaggagtagt 123336640

                                                                             
Query: 1931      gctgcttctgctggtggcaaagttgttgctccaactccaagcccacttccagtgggtctc 1990
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123336639 gctgcttctgctggtggcaaagttgttgctccaactccaagcccacttccagtgggtctc 123336580

                                                                             
Query: 1991      gggagagtttcaggagcctgttggccccaggccctgtcacttgctttccatccatccttg 2050
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123336579 gggagagtttcaggagcctgttggccccaggccctgtcacttgctttccatccatccttg 123336520

                                                                             
Query: 2051      ggcagtgccatcttcagttttatttattgaagtgtttgttcagtacagggcctggggaga 2110
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123336519 ggcagtgccatcttcagttttatttattgaagtgtttgttcagtacagggcctggggaga 123336460

                                                                             
Query: 2111      gggggctcattgcctcccacccaccaggcaccctgttcacactaatgtttacagcaccta 2170
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123336459 gggggctcattgcctcccacccaccaggcaccctgttcacactaatgtttacagcaccta 123336400

                                                                             
Query: 2171      agcttagcacagtgtccagggccccgccactccctgctcacggtgaactgacagtatcca 2230
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123336399 agcttagcacagtgtccagggccccgccactccctgctcacggtgaactgacagtatcca 123336340

                                                                             
Query: 2231      taggcctcaggaccacatggggtcagagactacactcaaagtcactccagcctctttctt 2290
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123336339 taggcctcaggaccacatggggtcagagactacactcaaagtcactccagcctctttctt 123336280

                                                                             
Query: 2291      tctccctcttccacttgctcactgccctggaatcaacagactggttgctggttggatttt 2350
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123336279 tctccctcttccacttgctcactgccctggaatcaacagactggttgctggttggatttt 123336220

                                                                             
Query: 2351      ctgaagcaagagctagaatcaccctttagcagaggctccgacccaaggaaaggtgttggg 2410
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123336219 ctgaagcaagagctagaatcaccctttagcagaggctccgacccaaggaaaggtgttggg 123336160

                                                                             
Query: 2411      gatccagcctccttaggaatggagaaagagctgcaattaaccaagtggccttttcccact 2470
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123336159 gatccagcctccttaggaatggagaaagagctgcaattaaccaagtggccttttcccact 123336100

                                                                             
Query: 2471      ctagctgacccggtnnnnnnnnnactaggttgcaaaggtgagcaggct-nnnnnnnaggc 2529
                 ||||||||||||||         ||||||||||| |||||||||||||        ||||
Sbjct: 123336099 ctagctgacccggtgggggggggactaggttgcagaggtgagcaggctcccccccaaggc 123336040

                                                                             
Query: 2530      cgatttatgccattcttgtctttggacttgcttgcttagggagggaagggtcagaccaga 2589
                 |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 123336039 cgatttatgccattcttgtctttggacttgcttgcttagggagggaggggtcagaccaga 123335980

                     
Query: 2590      gggc 2593
                 ||||
Sbjct: 123335979 gggc 123335976



 Score =  430 bits (217), Expect = e-117
 Identities = 217/217 (100%)
 Strand = Plus / Minus

                                                                             
Query: 578       ttatgccactggcaggaccacgggtgtggtgctggattctggggatggcgtcacccacgc 637
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123340301 ttatgccactggcaggaccacgggtgtggtgctggattctggggatggcgtcacccacgc 123340242

                                                                             
Query: 638       cgtgcccatttacgagggcttcgccatgccccactcaatcatgcgcatcgacatcgccgg 697
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123340241 cgtgcccatttacgagggcttcgccatgccccactcaatcatgcgcatcgacatcgccgg 123340182

                                                                             
Query: 698       ccgcgacgtctctcgcttccttcgcctttacctgcgcaaggagggctatgatttccactc 757
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123340181 ccgcgacgtctctcgcttccttcgcctttacctgcgcaaggagggctatgatttccactc 123340122

                                                      
Query: 758       atcctccgagtttgagattgtcaaggccataaaagaa 794
                 |||||||||||||||||||||||||||||||||||||
Sbjct: 123340121 atcctccgagtttgagattgtcaaggccataaaagaa 123340085



 Score =  357 bits (180), Expect = 2e-95
 Identities = 180/180 (100%)
 Strand = Plus / Minus

                                                                             
Query: 1165      ggggctccatccttgcctctctggacacctttaagaaaatgtgggtctctaagaaggaat 1224
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123337405 ggggctccatccttgcctctctggacacctttaagaaaatgtgggtctctaagaaggaat 123337346

                                                                             
Query: 1225      acgaggaagatggtgcccgatccatccataggaaaaccttctaatattgggacatcatct 1284
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123337345 acgaggaagatggtgcccgatccatccataggaaaaccttctaatattgggacatcatct 123337286

                                                                             
Query: 1285      tcacctctctctgaagttaactccactttaaaactcgctttcttgagtcgaggaactgcc 1344
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123337285 tcacctctctctgaagttaactccactttaaaactcgctttcttgagtcgaggaactgcc 123337226



 Score =  357 bits (180), Expect = 2e-95
 Identities = 180/180 (100%)
 Strand = Plus / Minus

                                                                             
Query: 886       agattggtccttcccgattccgggcccctgagctgctgttcaggccagacctgatcggcg 945
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123338736 agattggtccttcccgattccgggcccctgagctgctgttcaggccagacctgatcggcg 123338677

                                                                             
Query: 946       aggagagcgagggcatccacgaggtgctggtgttcgccatccagaagtctgacatggacc 1005
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123338676 aggagagcgagggcatccacgaggtgctggtgttcgccatccagaagtctgacatggacc 123338617

                                                                             
Query: 1006      tgcggcgcacgctcttctctaacatcgtcctctcgggaggctccaccctgttcaaaggtt 1065
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123338616 tgcggcgcacgctcttctctaacatcgtcctctcgggaggctccaccctgttcaaaggtt 123338557



 Score =  341 bits (172), Expect = 1e-90
 Identities = 186/188 (98%), Gaps = 2/188 (1%)
 Strand = Plus / Minus

                                                                             
Query: 1         gtattgtagt-cttcgaaagcgaggtcgggccg-tccctggccgtccggtactggaggcc 58
                 |||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 123354177 gtattgtagttcttcgaaagcgaggtcgggccgctccctggccgtccggtactggaggcc 123354118

                                                                             
Query: 59        agactgcgcatgcgtttcagtggcgttagcggcagaccggtctggcagttccttcctcgg 118
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123354117 agactgcgcatgcgtttcagtggcgttagcggcagaccggtctggcagttccttcctcgg 123354058

                                                                             
Query: 119       aaggagagattcctctgccatggagtcctacgatgtgatcgccaaccagcctgtcgtgat 178
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123354057 aaggagagattcctctgccatggagtcctacgatgtgatcgccaaccagcctgtcgtgat 123353998

                         
Query: 179       cgacaacg 186
                 ||||||||
Sbjct: 123353997 cgacaacg 123353990



 Score =  254 bits (128), Expect = 2e-64
 Identities = 128/128 (100%)
 Strand = Plus / Minus

                                                                             
Query: 325       aggagcaccgagggctgctctccatccgctaccccatggagcacggcattgtcaaggact 384
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123344222 aggagcaccgagggctgctctccatccgctaccccatggagcacggcattgtcaaggact 123344163

                                                                             
Query: 385       ggaacgacatggagcgcatctggcagtacgtctattccaaggaccagctgcagactttct 444
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123344162 ggaacgacatggagcgcatctggcagtacgtctattccaaggaccagctgcagactttct 123344103

                         
Query: 445       cagaggag 452
                 ||||||||
Sbjct: 123344102 cagaggag 123344095



 Score =  252 bits (127), Expect = 8e-64
 Identities = 127/127 (100%)
 Strand = Plus / Minus

                                                                             
Query: 451       agcatcctgtgctcctgacggaggcacctctaaacccacggaaaaaccgagaacgagctg 510
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123343035 agcatcctgtgctcctgacggaggcacctctaaacccacggaaaaaccgagaacgagctg 123342976

                                                                             
Query: 511       ctgaagttttcttcgagaccttcaatgtgccagcccttttcatctccatgcaagctgtgc 570
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123342975 ctgaagttttcttcgagaccttcaatgtgccagcccttttcatctccatgcaagctgtgc 123342916

                        
Query: 571       tcagcct 577
                 |||||||
Sbjct: 123342915 tcagcct 123342909



 Score =  184 bits (93), Expect = 2e-43
 Identities = 93/93 (100%)
 Strand = Plus / Minus

                                                                             
Query: 795       agagcctgctacctatccataaacccccagaaggatgagacactcgagacggagaaagct 854
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123339405 agagcctgctacctatccataaacccccagaaggatgagacactcgagacggagaaagct 123339346

                                                  
Query: 855       cagtattacctgcctgacggcagcaccattgag 887
                 |||||||||||||||||||||||||||||||||
Sbjct: 123339345 cagtattacctgcctgacggcagcaccattgag 123339313



 Score =  153 bits (77), Expect = 6e-34
 Identities = 77/77 (100%)
 Strand = Plus / Minus

                                                                             
Query: 251       tgtgggcagacccaagcacgttcgtgtcatggcaggcgccctcgaaggtgacatcttcat 310
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123345025 tgtgggcagacccaagcacgttcgtgtcatggcaggcgccctcgaaggtgacatcttcat 123344966

                                  
Query: 311       tggccccaaagctgagg 327
                 |||||||||||||||||
Sbjct: 123344965 tggccccaaagctgagg 123344949



 Score =  129 bits (65), Expect = 8e-27
 Identities = 65/65 (100%)
 Strand = Plus / Minus

                                                                             
Query: 186       ggatccggtgtgattaaagctggctttgctggtgatcaaatccccaagtactgttttcca 245
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123346378 ggatccggtgtgattaaagctggctttgctggtgatcaaatccccaagtactgttttcca 123346319

                      
Query: 246       aacta 250
                 |||||
Sbjct: 123346318 aacta 123346314



 Score =  127 bits (64), Expect = 3e-26
 Identities = 64/64 (100%)
 Strand = Plus / Minus

                                                                             
Query: 1061      aggttttggtgacaggctactgagtgaagtgaagaaactggctccaaaagacgtgaagat 1120
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123338457 aggttttggtgacaggctactgagtgaagtgaagaaactggctccaaaagacgtgaagat 123338398

                     
Query: 1121      cagg 1124
                 ||||
Sbjct: 123338397 cagg 123338394



 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 43/43 (100%)
 Strand = Plus / Minus

                                                            
Query: 1124      gatatcggcaccgcaggagagactgtattccacgtggatcggg 1166
                 |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123337740 gatatcggcaccgcaggagagactgtattccacgtggatcggg 123337698



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 68/77 (88%)
 Strand = Plus / Minus

                                                                             
Query: 606       gtgctggattctggggatggcgtcacccacgccgtgcccatttacgagggcttcgccatg 665
                 |||||||| ||||| ||||| |||||||||  |||||||||||||||||||| |||| ||
Sbjct: 109860445 gtgctggactctggagatggtgtcacccacaacgtgcccatttacgagggctacgccctg 109860386

                                  
Query: 666       ccccactcaatcatgcg 682
                 |||||| | ||||||||
Sbjct: 109860385 ccccacgccatcatgcg 109860369


>Sscrofa_Chr03 
||          Length = 144787322

 Score =  161 bits (81), Expect = 2e-36
 Identities = 144/165 (87%)
 Strand = Plus / Minus

                                                                            
Query: 900      cgattccgggcccctgagctgctgttcaggccagacctgatcggcgaggagagcgagggc 959
                |||||||||||||||||||||||||||  |||||||||||| || || ||||||||||| 
Sbjct: 59391742 cgattccgggcccctgagctgctgttccagccagacctgataggggatgagagcgagggg 59391683

                                                                            
Query: 960      atccacgaggtgctggtgttcgccatccagaagtctgacatggacctgcggcgcacgctc 1019
                 |||||||||||||||  ||||||||||| ||||| |||||||||||||| || || || 
Sbjct: 59391682 ctccacgaggtgctggccttcgccatccacaagtccgacatggacctgcgccggacactg 59391623

                                                             
Query: 1020     ttctctaacatcgtcctctcgggaggctccaccctgttcaaaggt 1064
                || || ||||||||||| || || |||||||| ||||||||||||
Sbjct: 59391622 ttttccaacatcgtcctttcaggtggctccacgctgttcaaaggt 59391578



 Score =  151 bits (76), Expect = 2e-33
 Identities = 115/128 (89%)
 Strand = Plus / Minus

                                                                            
Query: 325      aggagcaccgagggctgctctccatccgctaccccatggagcacggcattgtcaaggact 384
                |||||||||| ||||||||  |||||||||||||||||||||||||  | ||   |||||
Sbjct: 59393114 aggagcaccgggggctgctggccatccgctaccccatggagcacggagtggtgcgggact 59393055

                                                                            
Query: 385      ggaacgacatggagcgcatctggcagtacgtctattccaaggaccagctgcagactttct 444
                |||| ||||||||||||||||||||||||||||| |||||||||||||||||||| ||||
Sbjct: 59393054 ggaatgacatggagcgcatctggcagtacgtctactccaaggaccagctgcagaccttct 59392995

                        
Query: 445      cagaggag 452
                | ||||||
Sbjct: 59392994 ccgaggag 59392987



 Score = 89.7 bits (45), Expect = 7e-15
 Identities = 84/97 (86%)
 Strand = Plus / Minus

                                                                            
Query: 618      ggggatggcgtcacccacgccgtgcccatttacgagggcttcgccatgccccactcaatc 677
                ||||| || |||||||||||||| ||||| ||||||||||| |||||||| ||||| |||
Sbjct: 59392230 ggggacggggtcacccacgccgtccccatctacgagggctttgccatgccgcactccatc 59392171

                                                     
Query: 678      atgcgcatcgacatcgccggccgcgacgtctctcgct 714
                |||||  | ||||| |||||||| |||||||| ||||
Sbjct: 59392170 atgcgggtggacattgccggccgtgacgtctcccgct 59392134



 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 54/59 (91%)
 Strand = Plus / Minus

                                                                           
Query: 519      ttcttcgagaccttcaatgtgccagcccttttcatctccatgcaagctgtgctcagcct 577
                ||||| ||||||||||| || |||||||| |||||||||||||| ||||||||||||||
Sbjct: 59392562 ttctttgagaccttcaacgttccagccctgttcatctccatgcaggctgtgctcagcct 59392504


>Sscrofa_Chr12 
||          Length = 63588571

 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 54/62 (87%)
 Strand = Plus / Plus

                                                                           
Query: 610     tggattctggggatggcgtcacccacgccgtgcccatttacgagggcttcgccatgcccc 669
               |||| ||||||||||| ||||||||| | |||||||| |||||||| | |||| ||||||
Sbjct: 1164440 tggactctggggatggggtcacccacacggtgcccatctacgaggggtacgccctgcccc 1164499

                 
Query: 670     ac 671
               ||
Sbjct: 1164500 ac 1164501


  Database: Sscrofa_10.2.fasta
    Posted date:  Nov 16, 2011 10:34 AM
  Number of letters in database: 2,808,509,378
  Number of sequences in database:  4582
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4582
Number of Hits to DB: 70,175,821
Number of extensions: 562
Number of successful extensions: 562
Number of sequences better than 1.0e-05: 3
Number of HSP's gapped: 560
Number of HSP's successfully gapped: 20
Length of query: 2602
Length of database: 2,808,509,378
Length adjustment: 22
Effective length of query: 2580
Effective length of database: 2,808,408,574
Effective search space: 7245694120920
Effective search space used: 7245694120920
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 18 (36.2 bits)
S2: 30 (60.0 bits)