Animal-Genome cDNA 20110601C-013099


Search to RefSeqBP_Rel49

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-013099
         (1795 letters)

Database: RefSeq49_BP.fasta 
           33,088 sequences; 17,681,374 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_001019717.2| lysophospholipid acyltransferase 5 [Bos taur...   842   0.0  
Alignment   gi|NP_001179786.1| lysophospholipid acyltransferase 1 [Bos taur...   120   3e-27
Alignment   gi|XP_002697594.1| PREDICTED: membrane bound O-acyltransferase ...   120   3e-27
Alignment   gi|XP_002691577.1| PREDICTED: CG18445-like [Bos taurus].              88   2e-17
Alignment   gi|XP_001253491.2| PREDICTED: CG18445-like [Bos taurus].              88   2e-17
Alignment   gi|NP_001094678.1| probable protein-cysteine N-palmitoyltransfe...    55   2e-07
Alignment   gi|XP_002694856.1| PREDICTED: porcupine homolog (Drosophila)-li...    52   2e-06
Alignment   gi|XP_585983.1| PREDICTED: porcupine [Bos taurus].                    52   2e-06

>ref|NP_001019717.2| lysophospholipid acyltransferase 5 [Bos taurus].
          Length = 485

 Score =  842 bits (2176), Expect = 0.0
 Identities = 414/487 (85%), Positives = 433/487 (88%)
 Frame = +3

Query: 81   MASAAEGDVGAVVELAGVLRWVLQELSLNKLATSLGASEQALRLILSIFLGYPLALFYRR 260
            MASAAEGD+ A  EL   L W  Q+LSLNKLATSLGASEQALRLI+SIFLGYP ALFYRR
Sbjct: 1    MASAAEGDMEA--ELTRGLLWGFQDLSLNKLATSLGASEQALRLIISIFLGYPFALFYRR 58

Query: 261  YLFYKESYLIHLFHTFTGLSIAYYNFGTQLYHSVLCIVLQFLILRLMGRTITAVLTTFCF 440
            YLFYK+SYLIHLFHTFTGLSIAYYNFGTQLYHS+LCIVLQFLILRLMGRTITAVLTTFC 
Sbjct: 59   YLFYKDSYLIHLFHTFTGLSIAYYNFGTQLYHSLLCIVLQFLILRLMGRTITAVLTTFCV 118

Query: 441  QMXXXXXXXXXXXXXNYDIKWTMPHCVLTLKLIGLAMDYFDGGKDQKSLSSEQQKYAIRG 620
            QM              YDIKWTMPHCVLTLKLIGLAMDY+DGGKDQKSL+SEQQ YAI G
Sbjct: 119  QMGYLLAGYYNTATGTYDIKWTMPHCVLTLKLIGLAMDYYDGGKDQKSLTSEQQIYAIWG 178

Query: 621  VPSLLEVAGFSYFYGAFLVGPQFSMNHYMKLVQGQLTDIPGKIPNSTIPALKRLSLGLFY 800
            VPSLLE++GFSYFYGAFLVGPQFSMNHYMKLV+G+LTD+PGKIPNSTIPAL+RL+LGL Y
Sbjct: 179  VPSLLEISGFSYFYGAFLVGPQFSMNHYMKLVRGELTDVPGKIPNSTIPALRRLALGLVY 238

Query: 801  LVGYTLLSPHITEDYLLTDDYENLHFVFRCMYMLVWGKFVLYKYVTCWLVTEGVCILTGL 980
            LVGYTLLSPHITEDYLL+DDYEN  F FRCMYML+WGKFVLYKYVTCWLVTEGVCILTGL
Sbjct: 239  LVGYTLLSPHITEDYLLSDDYENGSFWFRCMYMLIWGKFVLYKYVTCWLVTEGVCILTGL 298

Query: 981  GFNDFDEHGKAKWDACANMKVWLFETNPRFTGTIASFNINTNAWVARYFFKRLKFLGNKV 1160
            GFN  DE+G AKWDACANMKVWLFET PRFTGTIASFNINTNAWVARYFFKRLKFLGNKV
Sbjct: 299  GFNGLDEYGTAKWDACANMKVWLFETTPRFTGTIASFNINTNAWVARYFFKRLKFLGNKV 358

Query: 1161 XXXXXXXXXXXXWHGLHSGYLVCFQMEFLIVIVERQAASLIQDSPTLSSLASITVLKPFY 1340
                        WHGLHSGYLVCFQMEFLIVIVERQAASLI+DSP LS LASITVL+P Y
Sbjct: 359  LSQGLSLLFLALWHGLHSGYLVCFQMEFLIVIVERQAASLIRDSPVLSRLASITVLQPLY 418

Query: 1341 YLVQQTIHWLFMGYSMTAFCLFTWDKWFKVYKSIYFLGHVFFLSLLFTLPYVRKAMVPRK 1520
            YL QQTIHWLFMGYSMTAFCLFTWDKW KVYKSIYFLGHVFFLSLLF LPYVRK MVPRK
Sbjct: 419  YLAQQTIHWLFMGYSMTAFCLFTWDKWMKVYKSIYFLGHVFFLSLLFILPYVRKVMVPRK 478

Query: 1521 EKLKKME 1541
            EKLKKME
Sbjct: 479  EKLKKME 485


>ref|NP_001179786.1| lysophospholipid acyltransferase 1 [Bos taurus].
          Length = 490

 Score =  120 bits (302), Expect = 3e-27
 Identities = 111/469 (23%), Positives = 193/469 (41%), Gaps = 26/469 (5%)
 Frame = +3

Query: 162  LNKLATSLGASEQALRLILSIFLGYPLALFYRRYLFYKESY--LIHLFHTFTGLSIAYYN 335
            L+ L+  LG     +  +         A ++R YL   E+   + H F T  G+    + 
Sbjct: 16   LHPLSELLGIPLDQVNFVACQLSALCAAFWFRLYLSPGETSPAVRHAFATIFGIYFVIFC 75

Query: 336  FGTQLYHSVLCIVLQFLILRLMGRTITAVLTT------FCFQMXXXXXXXXXXXXXNYDI 497
            FG    H      L  L+L   G  +TA ++       F                 +Y I
Sbjct: 76   FGWYSVH------LFVLVLMCYGIMVTASISNIHRYSFFVAMGYLTICHISRIYIFHYGI 129

Query: 498  KWTM---PHCVLTLKLIGLAMDYFDG-GKDQKSLSSEQQKYAIRGVPSLLEVAGFSYFYG 665
              T    P  ++T K+  LA    DG G+  + LSSEQ + A++  PS LE   +   + 
Sbjct: 130  LTTDFSGPLMIVTQKITTLAFQVHDGLGRRAEDLSSEQHRLAVKAKPSFLEYVSYLLNFM 189

Query: 666  AFLVGPQFSMNHYMKLVQGQ-----LTDIPGKI--------PNSTIPALKRLSLGLFYLV 806
            + + GP  +   Y+  ++G+     L ++  K         P+ T   + +L + L  L+
Sbjct: 190  SVIAGPCNNFKDYVAFIEGRHTHMKLLEVNWKEKGFHSLPEPSPTGAVMHKLCVTLVSLL 249

Query: 807  GYTLLSPHITEDYLLTDDY-ENLHFVFRCMYMLVWGKFVLYKYVTCWLVTEGVCILTGLG 983
             +  L+       L+ D +    +F+ R  Y+ +  +    KY   W + + V    G G
Sbjct: 250  LFLTLTKTFPVTSLVDDWFVHEANFLTRLCYLYIVMQASKPKYYFAWTLADAVNNAAGFG 309

Query: 984  FNDFDEHGKAKWDACANMKVWLFETNPRFTGTIASFNINTNAWVARYFFKRLKFLGNKVX 1163
            F+  D++G   WD  +N+ +W  ET   F   + ++NI T  W+ R  ++R+ +    + 
Sbjct: 310  FSGVDKNGNFSWDLLSNLNIWKIETATSFKMYVENWNIQTATWLKRVCYERVPWYPTVL- 368

Query: 1164 XXXXXXXXXXXWHGLHSGYLVCFQMEFLIVIVERQAASLIQDSPTLSSLASITVLKPFYY 1343
                       WHG++ GY   F    L+ +  R      +    LSS A    LK  Y 
Sbjct: 369  ----TFILSALWHGVYPGYYFTFLTGILVTLAARTVRKNYRHY-FLSSKA----LKAVYD 419

Query: 1344 LVQQTIHWLFMGYSMTAFCLFTWDKWFKVYKSIYFLGHVFFLSLLFTLP 1490
            +V   +  L + Y++  F +   +    +YKS+YF  H+  L ++  LP
Sbjct: 420  IVTWAVTQLAVSYTVAPFVMLAVEPTISLYKSMYFYLHIISLLIILFLP 468


>ref|XP_002697594.1| PREDICTED: membrane bound O-acyltransferase domain containing 1 [Bos
            taurus].
          Length = 490

 Score =  120 bits (302), Expect = 3e-27
 Identities = 111/469 (23%), Positives = 193/469 (41%), Gaps = 26/469 (5%)
 Frame = +3

Query: 162  LNKLATSLGASEQALRLILSIFLGYPLALFYRRYLFYKESY--LIHLFHTFTGLSIAYYN 335
            L+ L+  LG     +  +         A ++R YL   E+   + H F T  G+    + 
Sbjct: 16   LHPLSELLGIPLDQVNFVACQLSALCAAFWFRLYLSPGETSPAVRHAFATIFGIYFVIFC 75

Query: 336  FGTQLYHSVLCIVLQFLILRLMGRTITAVLTT------FCFQMXXXXXXXXXXXXXNYDI 497
            FG    H      L  L+L   G  +TA ++       F                 +Y I
Sbjct: 76   FGWYSVH------LFVLVLMCYGIMVTASISNIHRYSFFVAMGYLTICHISRIYIFHYGI 129

Query: 498  KWTM---PHCVLTLKLIGLAMDYFDG-GKDQKSLSSEQQKYAIRGVPSLLEVAGFSYFYG 665
              T    P  ++T K+  LA    DG G+  + LSSEQ + A++  PS LE   +   + 
Sbjct: 130  LTTDFSGPLMIVTQKITTLAFQVHDGLGRRAEDLSSEQHRLAVKAKPSFLEYVSYLLNFM 189

Query: 666  AFLVGPQFSMNHYMKLVQGQ-----LTDIPGKI--------PNSTIPALKRLSLGLFYLV 806
            + + GP  +   Y+  ++G+     L ++  K         P+ T   + +L + L  L+
Sbjct: 190  SVIAGPCNNFKDYVAFIEGRHTHMKLLEVNWKEKGFHSLPEPSPTGAVMHKLCVTLVSLL 249

Query: 807  GYTLLSPHITEDYLLTDDY-ENLHFVFRCMYMLVWGKFVLYKYVTCWLVTEGVCILTGLG 983
             +  L+       L+ D +    +F+ R  Y+ +  +    KY   W + + V    G G
Sbjct: 250  LFLTLTKTFPVTSLVDDWFVHEANFLTRLCYLYIVMQASKPKYYFAWTLADAVNNAAGFG 309

Query: 984  FNDFDEHGKAKWDACANMKVWLFETNPRFTGTIASFNINTNAWVARYFFKRLKFLGNKVX 1163
            F+  D++G   WD  +N+ +W  ET   F   + ++NI T  W+ R  ++R+ +    + 
Sbjct: 310  FSGVDKNGNFSWDLLSNLNIWKIETATSFKMYVENWNIQTATWLKRVCYERVPWYPTVL- 368

Query: 1164 XXXXXXXXXXXWHGLHSGYLVCFQMEFLIVIVERQAASLIQDSPTLSSLASITVLKPFYY 1343
                       WHG++ GY   F    L+ +  R      +    LSS A    LK  Y 
Sbjct: 369  ----TFILSALWHGVYPGYYFTFLTGILVTLAARTVRKNYRHY-FLSSKA----LKAVYD 419

Query: 1344 LVQQTIHWLFMGYSMTAFCLFTWDKWFKVYKSIYFLGHVFFLSLLFTLP 1490
            +V   +  L + Y++  F +   +    +YKS+YF  H+  L ++  LP
Sbjct: 420  IVTWAVTQLAVSYTVAPFVMLAVEPTISLYKSMYFYLHIISLLIILFLP 468


>ref|XP_002691577.1| PREDICTED: CG18445-like [Bos taurus].
          Length = 313

 Score = 88.2 bits (217), Expect = 2e-17
 Identities = 59/264 (22%), Positives = 121/264 (45%), Gaps = 15/264 (5%)
 Frame = +3

Query: 519  VLTLKLIGLAMDYFDGG-KDQKSLSSEQQKYAIRGVPSLLEVAGFSYFYGAFLVGPQFSM 695
            ++T K+  LA +  DG  +  + L+  Q+  A+R +PSLLE   ++  +   L GP  S 
Sbjct: 3    IITQKITSLAYEIHDGMFRKDEELTPSQRGLAVRRMPSLLEYLSYNCNFMGILAGPLCSY 62

Query: 696  NHYMKLVQGQLTDIP-----GKI--------PNSTIPALKRLSLGLFYLVGYTLLSPHIT 836
              Y+  ++G+   +      GK         P+  +  +++L +    L+ + ++S  + 
Sbjct: 63   KDYITFIEGRSYHMTQSGEDGKEEIQYERTEPSPNVAVIQKLLVCGLSLLFHLIISKMLP 122

Query: 837  EDYLLTDDYE-NLHFVFRCMYMLVWGKFVLYKYVTCWLVTEGVCILTGLGFNDFDEHGKA 1013
             +Y + + ++    +  + +Y+ V       KY   W + + +    G GF  +D++G A
Sbjct: 123  VEYNIDEHFQATASWPTKVIYLYVSLLAARPKYYFAWTLADAINNAAGFGFRGYDKNGAA 182

Query: 1014 KWDACANMKVWLFETNPRFTGTIASFNINTNAWVARYFFKRLKFLGNKVXXXXXXXXXXX 1193
            +WD  +N+++   E +  F   + ++NI T  W+ R  ++R       +           
Sbjct: 183  RWDLISNLRIKQIEMSTSFKMFLDNWNIQTALWLKRVCYERA-----SLSPTTQTFFLSA 237

Query: 1194 XWHGLHSGYLVCFQMEFLIVIVER 1265
             WHG++ GY + F    L+ +V R
Sbjct: 238  IWHGVYPGYYLTFLTGMLMTLVAR 261


>ref|XP_001253491.2| PREDICTED: CG18445-like [Bos taurus].
          Length = 313

 Score = 88.2 bits (217), Expect = 2e-17
 Identities = 59/264 (22%), Positives = 121/264 (45%), Gaps = 15/264 (5%)
 Frame = +3

Query: 519  VLTLKLIGLAMDYFDGG-KDQKSLSSEQQKYAIRGVPSLLEVAGFSYFYGAFLVGPQFSM 695
            ++T K+  LA +  DG  +  + L+  Q+  A+R +PSLLE   ++  +   L GP  S 
Sbjct: 3    IITQKITSLAYEIHDGMFRKDEELTPSQRGLAVRRMPSLLEYLSYNCNFMGILAGPLCSY 62

Query: 696  NHYMKLVQGQLTDIP-----GKI--------PNSTIPALKRLSLGLFYLVGYTLLSPHIT 836
              Y+  ++G+   +      GK         P+  +  +++L +    L+ + ++S  + 
Sbjct: 63   KDYITFIEGRSYHMTQSGEDGKEEIQYERTEPSPNVAVIQKLLVCGLSLLFHLIISKMLP 122

Query: 837  EDYLLTDDYE-NLHFVFRCMYMLVWGKFVLYKYVTCWLVTEGVCILTGLGFNDFDEHGKA 1013
             +Y + + ++    +  + +Y+ V       KY   W + + +    G GF  +D++G A
Sbjct: 123  VEYNIDEHFQATASWPTKVIYLYVSLLAARPKYYFAWTLADAINNAAGFGFRGYDKNGAA 182

Query: 1014 KWDACANMKVWLFETNPRFTGTIASFNINTNAWVARYFFKRLKFLGNKVXXXXXXXXXXX 1193
            +WD  +N+++   E +  F   + ++NI T  W+ R  ++R       +           
Sbjct: 183  RWDLISNLRIKQIEMSTSFKMFLDNWNIQTALWLKRVCYERA-----SLSPTTQTFFLSA 237

Query: 1194 XWHGLHSGYLVCFQMEFLIVIVER 1265
             WHG++ GY + F    L+ +V R
Sbjct: 238  IWHGVYPGYYLTFLTGMLMTLVAR 261


>ref|NP_001094678.1| probable protein-cysteine N-palmitoyltransferase porcupine [Bos
            taurus].
          Length = 450

 Score = 55.1 bits (131), Expect = 2e-07
 Identities = 50/191 (26%), Positives = 79/191 (41%), Gaps = 1/191 (0%)
 Frame = +3

Query: 582  SLSSEQQKYAIRGVPSLLEVAGFSYFYGAFLVGPQFSMNHYMKLVQGQLTDIPGKIPNST 761
            SL  +  +  +  VPS +E  G+ YF G  + GP  S + Y++ VQG        +    
Sbjct: 136  SLGFDLDRGEVGAVPSPVEFMGYLYFVGTIVFGPWISFHSYLQAVQGH------PLSRRW 189

Query: 762  IPALKR-LSLGLFYLVGYTLLSPHITEDYLLTDDYENLHFVFRCMYMLVWGKFVLYKYVT 938
            +  + R L+L L  LV  T + P++   ++  D    L    R     V   F    Y  
Sbjct: 190  LQKVARSLALALLCLVLSTCVGPYLFPYFIPLDGDRLLRKWLRAYESAV--SFHFSNYFV 247

Query: 939  CWLVTEGVCILTGLGFNDFDEHGKAKWDACANMKVWLFETNPRFTGTIASFNINTNAWVA 1118
             +L +E    L G GF +  +H   +WD   + K    E        + S+N+  + W+ 
Sbjct: 248  GFL-SEATATLAGAGFTEEKDH--LEWDLTVS-KPLNVELPRSMVEVVTSWNLPMSYWLN 303

Query: 1119 RYFFKRLKFLG 1151
             Y FK    LG
Sbjct: 304  NYVFKNALHLG 314


>ref|XP_002694856.1| PREDICTED: porcupine homolog (Drosophila)-like [Bos taurus].
          Length = 450

 Score = 52.0 bits (123), Expect = 2e-06
 Identities = 67/297 (22%), Positives = 108/297 (36%), Gaps = 6/297 (2%)
 Frame = +3

Query: 279  SYLIHLFHTFTGLSIAYYNFGTQLYH----SVLCIVLQFLILRLMGRTITAVLTTFCFQM 446
            SYL H      G    Y+ F   +      S+LC ++ FL  R   R +   +T   + +
Sbjct: 49   SYLKHASTVVGGFFSLYHFFELHMVWVMLLSLLCYLVLFLCRRSSHRGVFVSITILTYLL 108

Query: 447  XXXXXXXXXXXXXNYDIKWTMPHCVLTLKLIGLAMDYFDGGKDQKSLSSEQQKYAIRGVP 626
                             +      ++ +K + L  D  D G+             +  VP
Sbjct: 109  MGEMYMVDTVAWH----RMRGAQMIVAMKAVSLGFD-LDRGE-------------VSMVP 150

Query: 627  SLLEVAGFSYFYGAFLVGPQFSMNHYMKLVQGQLTDIP--GKIPNSTIPALKRLSLGLFY 800
            S +E  G+  F G  + GP  S + Y++ VQG+        K+  S       L L L  
Sbjct: 151  SPMEFMGYLCFVGTVIFGPWISFHRYLEAVQGRPLSCRWLQKVAQS-------LLLALLC 203

Query: 801  LVGYTLLSPHITEDYLLTDDYENLHFVFRCMYMLVWGKFVLYKYVTCWLVTEGVCILTGL 980
            LV  T + P++   ++  D    L    R     V  +F  Y       ++E    L G 
Sbjct: 204  LVLSTCVGPYLFPYFIPLDGDHLLRKWLRAYESAVSFRFSNY---FVGFLSEATATLAGT 260

Query: 981  GFNDFDEHGKAKWDACANMKVWLFETNPRFTGTIASFNINTNAWVARYFFKRLKFLG 1151
            GF +  +H   +WD   + K    E        + S+N+  + W+  Y FK    LG
Sbjct: 261  GFTEEKDH--LEWDLTVS-KPLNVELPRSMVEVVTSWNLPMSCWLNNYVFKNALHLG 314


>ref|XP_585983.1| PREDICTED: porcupine [Bos taurus].
          Length = 450

 Score = 52.0 bits (123), Expect = 2e-06
 Identities = 67/297 (22%), Positives = 108/297 (36%), Gaps = 6/297 (2%)
 Frame = +3

Query: 279  SYLIHLFHTFTGLSIAYYNFGTQLYH----SVLCIVLQFLILRLMGRTITAVLTTFCFQM 446
            SYL H      G    Y+ F   +      S+LC ++ FL  R   R +   +T   + +
Sbjct: 49   SYLKHASTVVGGFFSLYHFFELHMVWVMLLSLLCYLVLFLCRRSSHRGVFVSITILTYLL 108

Query: 447  XXXXXXXXXXXXXNYDIKWTMPHCVLTLKLIGLAMDYFDGGKDQKSLSSEQQKYAIRGVP 626
                             +      ++ +K + L  D  D G+             +  VP
Sbjct: 109  MGEMYMVDTVAWH----RMRGAQMIVAMKAVSLGFD-LDRGE-------------VSMVP 150

Query: 627  SLLEVAGFSYFYGAFLVGPQFSMNHYMKLVQGQLTDIP--GKIPNSTIPALKRLSLGLFY 800
            S +E  G+  F G  + GP  S + Y++ VQG+        K+  S       L L L  
Sbjct: 151  SPMEFMGYLCFVGTVIFGPWISFHRYLEAVQGRPLSCRWLQKVAQS-------LLLALLC 203

Query: 801  LVGYTLLSPHITEDYLLTDDYENLHFVFRCMYMLVWGKFVLYKYVTCWLVTEGVCILTGL 980
            LV  T + P++   ++  D    L    R     V  +F  Y       ++E    L G 
Sbjct: 204  LVLSTCVGPYLFPYFIPLDGDHLLRKWLRAYESAVSFRFSNY---FVGFLSEATATLAGT 260

Query: 981  GFNDFDEHGKAKWDACANMKVWLFETNPRFTGTIASFNINTNAWVARYFFKRLKFLG 1151
            GF +  +H   +WD   + K    E        + S+N+  + W+  Y FK    LG
Sbjct: 261  GFTEEKDH--LEWDLTVS-KPLNVELPRSMVEVVTSWNLPMSCWLNNYVFKNALHLG 314


  Database: RefSeq49_BP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 17,681,374
  Number of sequences in database:  33,088
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33088
Number of Hits to DB: 72,741,420
Number of extensions: 2151132
Number of successful extensions: 9099
Number of sequences better than 1.0e-05: 8
Number of HSP's gapped: 9061
Number of HSP's successfully gapped: 8
Length of query: 598
Length of database: 17,681,374
Length adjustment: 108
Effective length of query: 490
Effective length of database: 14,107,870
Effective search space: 6912856300
Effective search space used: 6912856300
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)

Search to RefSeqCP_Rel49

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-013099
         (1795 letters)

Database: RefSeq49_CP.fasta 
           33,336 sequences; 18,874,504 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|XP_543842.2| PREDICTED: similar to gene rich cluster, C3f ge...   872   0.0  
Alignment   gi|XP_867234.1| PREDICTED: similar to gene rich cluster, C3f ge...   530   e-150
Alignment   gi|XP_867245.1| PREDICTED: similar to gene rich cluster, C3f ge...   390   e-108
Alignment   gi|XP_532866.2| PREDICTED: similar to O-acyltransferase (membra...   113   7e-25
Alignment   gi|XP_545360.2| PREDICTED: similar to O-acyltransferase (membra...   102   2e-21
Alignment   gi|XP_541427.2| PREDICTED: similar to leukocyte receptor cluste...    65   3e-10
Alignment   gi|XP_862869.1| PREDICTED: similar to porcupine isoform C isofo...    55   2e-07
Alignment   gi|XP_538023.2| PREDICTED: similar to porcupine isoform A isofo...    55   2e-07
Alignment   gi|XP_851011.1| PREDICTED: similar to porcupine isoform D isofo...    51   4e-06

>ref|XP_543842.2| PREDICTED: similar to gene rich cluster, C3f gene isoform 1 [Canis
            familiaris].
          Length = 487

 Score =  872 bits (2252), Expect = 0.0
 Identities = 426/486 (87%), Positives = 441/486 (90%)
 Frame = +3

Query: 81   MASAAEGDVGAVVELAGVLRWVLQELSLNKLATSLGASEQALRLILSIFLGYPLALFYRR 260
            MASAAEGDVG V ELA VLRW   ELSLNKLATSLGASEQALRLI+SIF+GYPLALF+RR
Sbjct: 1    MASAAEGDVGTVAELARVLRWGFDELSLNKLATSLGASEQALRLIISIFMGYPLALFFRR 60

Query: 261  YLFYKESYLIHLFHTFTGLSIAYYNFGTQLYHSVLCIVLQFLILRLMGRTITAVLTTFCF 440
            YLF+K+SYLIHLFHTFTGLSIAY+NFG QLYHS+LC+VLQFLILRLMGRTITAVLTT+CF
Sbjct: 61   YLFFKDSYLIHLFHTFTGLSIAYFNFGNQLYHSLLCVVLQFLILRLMGRTITAVLTTYCF 120

Query: 441  QMXXXXXXXXXXXXXNYDIKWTMPHCVLTLKLIGLAMDYFDGGKDQKSLSSEQQKYAIRG 620
            QM             NYDIKWTMPHCVLTLKLIGLA+DYFDGGKD  SLSSEQQKYAIRG
Sbjct: 121  QMAYLLAGYYYTATGNYDIKWTMPHCVLTLKLIGLAVDYFDGGKDLNSLSSEQQKYAIRG 180

Query: 621  VPSLLEVAGFSYFYGAFLVGPQFSMNHYMKLVQGQLTDIPGKIPNSTIPALKRLSLGLFY 800
            VPSLLEVAGFSYFYGAFLVGPQFSMNHYMKLVQGQLTDIPGKIPNSTIPALKRL LGL Y
Sbjct: 181  VPSLLEVAGFSYFYGAFLVGPQFSMNHYMKLVQGQLTDIPGKIPNSTIPALKRLGLGLVY 240

Query: 801  LVGYTLLSPHITEDYLLTDDYENLHFVFRCMYMLVWGKFVLYKYVTCWLVTEGVCILTGL 980
            LVGYTLLSPHITEDYLLT+DYEN  F FRCMYML+WGKFVLYKYVTCWLVTEGVCILTGL
Sbjct: 241  LVGYTLLSPHITEDYLLTEDYENHSFWFRCMYMLLWGKFVLYKYVTCWLVTEGVCILTGL 300

Query: 981  GFNDFDEHGKAKWDACANMKVWLFETNPRFTGTIASFNINTNAWVARYFFKRLKFLGNKV 1160
            GFNDFDE GKAKWDACANMKVWLFET PRFTGTIASFNINTNAWVARYFFKRLKFLGNK 
Sbjct: 301  GFNDFDERGKAKWDACANMKVWLFETTPRFTGTIASFNINTNAWVARYFFKRLKFLGNKE 360

Query: 1161 XXXXXXXXXXXXWHGLHSGYLVCFQMEFLIVIVERQAASLIQDSPTLSSLASITVLKPFY 1340
                        WHGLHSGYLVCFQMEFLIVIVERQAA LIQ+SPTLS+LASITVL+PFY
Sbjct: 361  LSQGLSLLFLALWHGLHSGYLVCFQMEFLIVIVERQAARLIQESPTLSNLASITVLQPFY 420

Query: 1341 YLVQQTIHWLFMGYSMTAFCLFTWDKWFKVYKSIYFLGHVFFLSLLFTLPYVRKAMVPRK 1520
            YLVQQTIHWLFMGYSMTAFCLFTWDKWFKVYKSIYFLGHVFFLSLLF LPYV KAMVPRK
Sbjct: 421  YLVQQTIHWLFMGYSMTAFCLFTWDKWFKVYKSIYFLGHVFFLSLLFILPYVHKAMVPRK 480

Query: 1521 EKLKKM 1538
            EKLKKM
Sbjct: 481  EKLKKM 486


>ref|XP_867234.1| PREDICTED: similar to gene rich cluster, C3f gene isoform 2 [Canis
            familiaris].
          Length = 283

 Score =  530 bits (1365), Expect = e-150
 Identities = 254/282 (90%), Positives = 259/282 (91%)
 Frame = +3

Query: 693  MNHYMKLVQGQLTDIPGKIPNSTIPALKRLSLGLFYLVGYTLLSPHITEDYLLTDDYENL 872
            MNHYMKLVQGQLTDIPGKIPNSTIPALKRL LGL YLVGYTLLSPHITEDYLLT+DYEN 
Sbjct: 1    MNHYMKLVQGQLTDIPGKIPNSTIPALKRLGLGLVYLVGYTLLSPHITEDYLLTEDYENH 60

Query: 873  HFVFRCMYMLVWGKFVLYKYVTCWLVTEGVCILTGLGFNDFDEHGKAKWDACANMKVWLF 1052
             F FRCMYML+WGKFVLYKYVTCWLVTEGVCILTGLGFNDFDE GKAKWDACANMKVWLF
Sbjct: 61   SFWFRCMYMLLWGKFVLYKYVTCWLVTEGVCILTGLGFNDFDERGKAKWDACANMKVWLF 120

Query: 1053 ETNPRFTGTIASFNINTNAWVARYFFKRLKFLGNKVXXXXXXXXXXXXWHGLHSGYLVCF 1232
            ET PRFTGTIASFNINTNAWVARYFFKRLKFLGNK             WHGLHSGYLVCF
Sbjct: 121  ETTPRFTGTIASFNINTNAWVARYFFKRLKFLGNKELSQGLSLLFLALWHGLHSGYLVCF 180

Query: 1233 QMEFLIVIVERQAASLIQDSPTLSSLASITVLKPFYYLVQQTIHWLFMGYSMTAFCLFTW 1412
            QMEFLIVIVERQAA LIQ+SPTLS+LASITVL+PFYYLVQQTIHWLFMGYSMTAFCLFTW
Sbjct: 181  QMEFLIVIVERQAARLIQESPTLSNLASITVLQPFYYLVQQTIHWLFMGYSMTAFCLFTW 240

Query: 1413 DKWFKVYKSIYFLGHVFFLSLLFTLPYVRKAMVPRKEKLKKM 1538
            DKWFKVYKSIYFLGHVFFLSLLF LPYV KAMVPRKEKLKKM
Sbjct: 241  DKWFKVYKSIYFLGHVFFLSLLFILPYVHKAMVPRKEKLKKM 282


>ref|XP_867245.1| PREDICTED: similar to gene rich cluster, C3f gene isoform 3 [Canis
           familiaris].
          Length = 226

 Score =  390 bits (1001), Expect = e-108
 Identities = 193/225 (85%), Positives = 203/225 (90%)
 Frame = +3

Query: 81  MASAAEGDVGAVVELAGVLRWVLQELSLNKLATSLGASEQALRLILSIFLGYPLALFYRR 260
           MASAAEGDVG V ELA VLRW   ELSLNKLATSLGASEQALRLI+SIF+GYPLALF+RR
Sbjct: 1   MASAAEGDVGTVAELARVLRWGFDELSLNKLATSLGASEQALRLIISIFMGYPLALFFRR 60

Query: 261 YLFYKESYLIHLFHTFTGLSIAYYNFGTQLYHSVLCIVLQFLILRLMGRTITAVLTTFCF 440
           YLF+K+SYLIHLFHTFTGLSIAY+NFG QLYHS+LC+VLQFLILRLMGRTITAVLTT+CF
Sbjct: 61  YLFFKDSYLIHLFHTFTGLSIAYFNFGNQLYHSLLCVVLQFLILRLMGRTITAVLTTYCF 120

Query: 441 QMXXXXXXXXXXXXXNYDIKWTMPHCVLTLKLIGLAMDYFDGGKDQKSLSSEQQKYAIRG 620
           QM             NYDIKWTMPHCVLTLKLIGLA+DYFDGGKD  SLSSEQQKYAIRG
Sbjct: 121 QMAYLLAGYYYTATGNYDIKWTMPHCVLTLKLIGLAVDYFDGGKDLNSLSSEQQKYAIRG 180

Query: 621 VPSLLEVAGFSYFYGAFLVGPQFSMNHYMKLVQGQLTDIPGKIPN 755
           VPSLLEVAGFSYFYGAFLVGPQFSMNHYMKLVQGQLTDIPGKIPN
Sbjct: 181 VPSLLEVAGFSYFYGAFLVGPQFSMNHYMKLVQGQLTDIPGKIPN 225


>ref|XP_532866.2| PREDICTED: similar to O-acyltransferase (membrane bound) domain
            containing 2 [Canis familiaris].
          Length = 612

 Score =  113 bits (282), Expect = 7e-25
 Identities = 98/475 (20%), Positives = 202/475 (42%), Gaps = 27/475 (5%)
 Frame = +3

Query: 147  LQELSLNKLATSLGASEQALRLILSIFLGYPLALFYRRYLFYKE--SYLIHLFHTFTGLS 320
            L E+ L +    +    + +  ++        A+++R YL   +  S++ H+  T  GL 
Sbjct: 99   LDEIYLAQCLDGMLEGPEEVNFVVCQLFALLAAIWFRTYLHSSKTSSFIRHVVATLLGLY 158

Query: 321  IAYYNFGTQLYHSVLCIVLQFLILRLMGRTITAVLTTFCFQMXXXXXXXXXXXXX----- 485
            +A + FG    H ++   + + I+ ++G      +  +CF                    
Sbjct: 159  LALFCFGWYALHFLVQSGISYCIMIVIG---VENMHKYCFVFALGYLTVCQITRVYIFDY 215

Query: 486  -NYDIKWTMPHCVLTLKLIGLAMDYFDGG-KDQKSLSSEQQKYAIRGVPSLLEVAGFSYF 659
              Y   ++ P  ++T K+  LA +  DG  +  + L+S Q+  A+R +PSLLE   ++  
Sbjct: 216  GQYSADFSGPMMIITQKITSLAYEIHDGMFRKDEELTSSQRGLAVRRMPSLLEYLSYTCN 275

Query: 660  YGAFLVGPQFSMNHYMKLVQGQLT-----------DIPGKI--PNSTIPALKRLSLGLFY 800
            +   L GP  S   Y+  ++G+             ++P +   P+  I  +++L +    
Sbjct: 276  FMGILAGPLCSYRDYIIFIEGRAQHRAQPSPSGKEEMPCERAEPSPNIAVIQKLLICGLS 335

Query: 801  LVGYTLLSPHITEDYLLTDDYE-NLHFVFRCMYMLVWGKFVLYKYVTCWLVTEGVCILTG 977
            L+ +  +S  ++ +Y + + ++    +  + +Y+ V       KY   W + + +    G
Sbjct: 336  LLFHLTISKTLSVEYNIDERFQATASWPTKVVYLYVSLLAARPKYYFAWTLADAINNAAG 395

Query: 978  LGFNDFDEHGKAKWDACANMKVWLFETNPRFTGTIASFNINTNAWVARYFFKRLKFLGNK 1157
             GF  +DE+G A+WD  +N+++   E +  F   + ++NI T  W+ R  ++R       
Sbjct: 396  FGFRGYDENGTARWDLISNLRIQQIEMSTSFKMFLDNWNIQTALWLKRVCYERA-----S 450

Query: 1158 VXXXXXXXXXXXXWHGLHSGYLVCFQMEFLIVIVERQAASLIQDSPTLSSLASITVLKPF 1337
            +            WHG++ GY     + FL  +V   AA  ++     ++     +  P 
Sbjct: 451  LSPTIQTFILSAIWHGVYPGY----YLTFLTGVVMTLAARAMR-----NNFRHYFIEPPQ 501

Query: 1338 YYLVQQTIHWLF----MGYSMTAFCLFTWDKWFKVYKSIYFLGHVFFLSLLFTLP 1490
              L+   + W+     + Y++  F L +    F  Y S Y+  H+  + +L  LP
Sbjct: 502  LKLLYDVLTWIMTQIAISYTVVPFVLLSIKPSFMFYSSWYYCLHIAGILILLLLP 556


>ref|XP_545360.2| PREDICTED: similar to O-acyltransferase (membrane bound) domain
            containing 1 [Canis familiaris].
          Length = 453

 Score =  102 bits (253), Expect = 2e-21
 Identities = 78/324 (24%), Positives = 145/324 (44%), Gaps = 15/324 (4%)
 Frame = +3

Query: 510  PHCVLTLKLIGLAMDYFDG-GKDQKSLSSEQQKYAIRGVPSLLEVAGFSYFYGAFLVGPQ 686
            P  ++T K+  LA    DG G+  + LS+EQQ+ A++  PS LE   +   + + + GP 
Sbjct: 140  PLMIVTQKITTLAFQVHDGLGRRAEDLSAEQQRLAVKVKPSFLEYLSYLLNFMSVIAGPC 199

Query: 687  FSMNHYMKLVQGQ-----LTDIPGKI--------PNSTIPALKRLSLGLFYLVGYTLLSP 827
             +   Y+  ++G+     L ++  K         P+ T   + +L + L  L+ +  L+ 
Sbjct: 200  NNFKDYIAFIEGRHIHAKLLEVNWKQRGFHNLPEPSPTGAVIHKLCMTLVSLLLFLTLTK 259

Query: 828  HITEDYLLTDDY-ENLHFVFRCMYMLVWGKFVLYKYVTCWLVTEGVCILTGLGFNDFDEH 1004
                  L+ D +    +F+ R  Y+ +  +    KY   W + + V    G GF+  D++
Sbjct: 260  TFPVTCLVDDWFVHKANFLTRLCYLYIVMQASKPKYYFAWTLADAVNNAAGFGFSGVDKN 319

Query: 1005 GKAKWDACANMKVWLFETNPRFTGTIASFNINTNAWVARYFFKRLKFLGNKVXXXXXXXX 1184
            G   WD  +N+ +W  ET   F   + ++NI T  W+ R  ++R+ +    +        
Sbjct: 320  GNFCWDLLSNLNIWKIETATSFKMYLENWNIQTATWLKRVCYERVPWYPTVL-----TFF 374

Query: 1185 XXXXWHGLHSGYLVCFQMEFLIVIVERQAASLIQDSPTLSSLASITVLKPFYYLVQQTIH 1364
                WHG++ GY   F    L+ +    AA  ++++     L+S   LK  Y +V   + 
Sbjct: 375  LSALWHGVYPGYYFTFLTGILVTV----AARTVRNNYRHCFLSS-RALKVVYDVVTWAVT 429

Query: 1365 WLFMGYSMTAFCLFTWDKWFKVYK 1436
             L + Y++  F L   +    +YK
Sbjct: 430  QLAVSYTVAPFVLLAVEPTISLYK 453


>ref|XP_541427.2| PREDICTED: similar to leukocyte receptor cluster (LRC) member 4
            protein [Canis familiaris].
          Length = 1041

 Score = 64.7 bits (156), Expect = 3e-10
 Identities = 93/419 (22%), Positives = 152/419 (36%), Gaps = 30/419 (7%)
 Frame = +3

Query: 312  GLSIAYYNFGTQLYHSVLCIVLQFLILRLMGRTITAVLTTFCFQMXXXXXXXXXXXXXNY 491
            GL +  +  G    HS++ I+  + +++    +  A+   + F                 
Sbjct: 38   GLGLTLFTCGPHTLHSLITILGTWALIQAQPCSCHALALAWTFSYLLFFRALGLLGLPTP 97

Query: 492  DIKWTMPHCVLTLKLIGLAMDYFDGGKDQ-KSLSSEQQKYAIRG----VPSLLEVAGFSY 656
                     +LTLKL+ LA +  D    Q K ++S   K    G    VPSL+E   +SY
Sbjct: 98   TPFTNAVQLLLTLKLVSLASEVQDLHLAQRKEMASGFSKGPSLGLLPDVPSLMETLSYSY 157

Query: 657  FYGAFLVGPQFSMNHYMKLVQGQLTDIPGKIPNSTIPALKRL-SLGLFYLVGYTLLSPHI 833
             Y   + GP F    Y+  ++      PG +P S  P L+R     LF L+   LLS H+
Sbjct: 158  CYVGIMTGPFFRYRTYLDWLE---QPFPGAVP-SLRPLLRRAWPAPLFGLL--FLLSSHL 211

Query: 834  TE-DYLLTDDYENLHFVFRCMYML-VWGKFVLYKYVTCWLVTEGVCILTGLGFNDFDEHG 1007
               + +  D +       R  YM+ V+  F +  YV  W+  E  CI  G G        
Sbjct: 212  FPLEAVREDAFYARPLPARLFYMIPVFFAFRMRFYV-AWIAAECGCIAAGFGAYPVAAKA 270

Query: 1008 KA------------------KWDACANMKVWLFETNPRFTGTIASFNINTNAWVARYFFK 1133
            +A                   ++   N+  +  +   R    +  +N+    W+A+Y +K
Sbjct: 271  RAGGGPTLHPSPEKAASLEYDYETIRNIDCYGTDFCVRVRDGMRYWNMTVQWWLAQYIYK 330

Query: 1134 RLKFLGNKVXXXXXXXXXXXXWHGLHSGYLVCFQMEFLIVIVERQAASLIQDSPTLSSLA 1313
                  + V            WHGLH GY + F    L +  E    S ++         
Sbjct: 331  SAP-ARSYVLRSAWTMLLSAYWHGLHPGYYLSFLTIPLCLSAEGCLESALRGR------- 382

Query: 1314 SITVLKPFYYLVQQTIHWLF----MGYSMTAFCLFTWDKWFKVYKSIYFLGHVFFLSLL 1478
                L P        +HW        Y    F L +     + + S+YF  H+  ++ L
Sbjct: 383  ----LSPGGQKAWDWVHWFLKMRAYDYMCMGFVLLSLGDTLRYWASVYFCVHIVAVAAL 437


>ref|XP_862869.1| PREDICTED: similar to porcupine isoform C isoform 3 [Canis
            familiaris].
          Length = 455

 Score = 55.1 bits (131), Expect = 2e-07
 Identities = 46/193 (23%), Positives = 83/193 (43%), Gaps = 3/193 (1%)
 Frame = +3

Query: 582  SLSSEQQKYAIRGVPSLLEVAGFSYFYGAFLVGPQFSMNHYMKLVQGQLTDIPGKIPNST 761
            SL  +  +  +  VPS +E  G+ YF G  + GP  S + Y++ VQG+       +    
Sbjct: 136  SLGFDLDRGEVGAVPSPMEFMGYLYFVGTIVFGPWISFHSYLQAVQGR------PLSRRW 189

Query: 762  IPALKR-LSLGLFYLVGYTLLSPHITEDYLLTDDYENLHFVFRCMYMLVWGKFVLYKYVT 938
            +  + R L+L L  LV  T + P++   ++  D    L       ++  +   V + +  
Sbjct: 190  LQKVARSLALALLCLVLSTCVGPYLFPYFIPLDGDRLLRKGTMVRWLRAYESAVSFHFSN 249

Query: 939  CWL--VTEGVCILTGLGFNDFDEHGKAKWDACANMKVWLFETNPRFTGTIASFNINTNAW 1112
             ++  ++E    L G GF +  +H   +WD   + K    E        + S+N+  + W
Sbjct: 250  YFVGFLSEATATLAGAGFTEEKDH--LEWDLTVS-KPLNVELPRSMVEVVTSWNLPMSYW 306

Query: 1113 VARYFFKRLKFLG 1151
            +  Y FK    LG
Sbjct: 307  LNNYVFKNALRLG 319


>ref|XP_538023.2| PREDICTED: similar to porcupine isoform A isoform 1 [Canis
            familiaris].
          Length = 450

 Score = 55.1 bits (131), Expect = 2e-07
 Identities = 50/191 (26%), Positives = 80/191 (41%), Gaps = 1/191 (0%)
 Frame = +3

Query: 582  SLSSEQQKYAIRGVPSLLEVAGFSYFYGAFLVGPQFSMNHYMKLVQGQLTDIPGKIPNST 761
            SL  +  +  +  VPS +E  G+ YF G  + GP  S + Y++ VQG+       +    
Sbjct: 136  SLGFDLDRGEVGAVPSPMEFMGYLYFVGTIVFGPWISFHSYLQAVQGR------PLSRRW 189

Query: 762  IPALKR-LSLGLFYLVGYTLLSPHITEDYLLTDDYENLHFVFRCMYMLVWGKFVLYKYVT 938
            +  + R L+L L  LV  T + P++   ++  D    L    R     V   F    Y  
Sbjct: 190  LQKVARSLALALLCLVLSTCVGPYLFPYFIPLDGDRLLRKWLRAYESAV--SFHFSNYFV 247

Query: 939  CWLVTEGVCILTGLGFNDFDEHGKAKWDACANMKVWLFETNPRFTGTIASFNINTNAWVA 1118
             +L +E    L G GF +  +H   +WD   + K    E        + S+N+  + W+ 
Sbjct: 248  GFL-SEATATLAGAGFTEEKDH--LEWDLTVS-KPLNVELPRSMVEVVTSWNLPMSYWLN 303

Query: 1119 RYFFKRLKFLG 1151
             Y FK    LG
Sbjct: 304  NYVFKNALRLG 314


>ref|XP_851011.1| PREDICTED: similar to porcupine isoform D isoform 2 [Canis
            familiaris].
          Length = 461

 Score = 50.8 bits (120), Expect = 4e-06
 Identities = 47/199 (23%), Positives = 84/199 (42%), Gaps = 9/199 (4%)
 Frame = +3

Query: 582  SLSSEQQKYAIRGVPSLLEVAGFSYFYGAFLVGPQFSMNHYMKLVQGQLTDIPGKIPNST 761
            SL  +  +  +  VPS +E  G+ YF G  + GP  S + Y++ VQG+       +    
Sbjct: 136  SLGFDLDRGEVGAVPSPMEFMGYLYFVGTIVFGPWISFHSYLQAVQGR------PLSRRW 189

Query: 762  IPALKR-LSLGLFYLVGYTLLSPHITEDYLLTDDYENLHFVFR------CMYMLVWGKFV 920
            +  + R L+L L  LV  T + P++   ++  D    L    R        ++  +   V
Sbjct: 190  LQKVARSLALALLCLVLSTCVGPYLFPYFIPLDGDRLLRNKKRKARGTMVRWLRAYESAV 249

Query: 921  LYKYVTCWL--VTEGVCILTGLGFNDFDEHGKAKWDACANMKVWLFETNPRFTGTIASFN 1094
             + +   ++  ++E    L G GF +  +H   +WD   + K    E        + S+N
Sbjct: 250  SFHFSNYFVGFLSEATATLAGAGFTEEKDH--LEWDLTVS-KPLNVELPRSMVEVVTSWN 306

Query: 1095 INTNAWVARYFFKRLKFLG 1151
            +  + W+  Y FK    LG
Sbjct: 307  LPMSYWLNNYVFKNALRLG 325


  Database: RefSeq49_CP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 18,874,504
  Number of sequences in database:  33,336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33336
Number of Hits to DB: 75,769,524
Number of extensions: 2210873
Number of successful extensions: 9191
Number of sequences better than 1.0e-05: 9
Number of HSP's gapped: 9153
Number of HSP's successfully gapped: 9
Length of query: 598
Length of database: 18,874,504
Length adjustment: 109
Effective length of query: 489
Effective length of database: 15,240,880
Effective search space: 7452790320
Effective search space used: 7452790320
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)

Search to RefSeqSP_Rel49

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-013099
         (1795 letters)

Database: RefSeq49_SP.fasta 
           24,897 sequences; 11,343,932 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|XP_003355641.1| PREDICTED: lysophospholipid acyltransferase ...   733   0.0  
Alignment   gi|XP_001928378.1| PREDICTED: lysophospholipid acyltransferase ...   120   3e-27
Alignment   gi|XP_003354981.1| PREDICTED: lysophospholipid acyltransferase ...    69   8e-12
Alignment   gi|XP_003127465.1| PREDICTED: lysophospholipid acyltransferase ...    65   1e-10
Alignment   gi|XP_003360348.1| PREDICTED: probable protein-cysteine N-palmi...    55   2e-07
Alignment   gi|XP_003360346.1| PREDICTED: probable protein-cysteine N-palmi...    55   2e-07
Alignment   gi|XP_003360347.1| PREDICTED: probable protein-cysteine N-palmi...    53   6e-07
Alignment   gi|NP_001177352.1| ghrelin O-acyltransferase [Sus scrofa].            52   1e-06
Alignment   gi|XP_003356093.1| PREDICTED: lysophospholipid acyltransferase ...    50   5e-06

>ref|XP_003355641.1| PREDICTED: lysophospholipid acyltransferase 5 [Sus scrofa].
          Length = 381

 Score =  733 bits (1891), Expect = 0.0
 Identities = 355/381 (93%), Positives = 356/381 (93%)
 Frame = +3

Query: 399  MGRTITAVLTTFCFQMXXXXXXXXXXXXXNYDIKWTMPHCVLTLKLIGLAMDYFDGGKDQ 578
            MGRTITAVLTTFCFQM             NYDIKWTMPHCVLTLKLIGLAMDYFDGGKDQ
Sbjct: 1    MGRTITAVLTTFCFQMAYLLAGYYYTATGNYDIKWTMPHCVLTLKLIGLAMDYFDGGKDQ 60

Query: 579  KSLSSEQQKYAIRGVPSLLEVAGFSYFYGAFLVGPQFSMNHYMKLVQGQLTDIPGKIPNS 758
            KSLSSEQQKYAIRGVPSLLEVAGFSYFYGAFLVGPQFSMNHYMKLVQGQLTDIPGKIPNS
Sbjct: 61   KSLSSEQQKYAIRGVPSLLEVAGFSYFYGAFLVGPQFSMNHYMKLVQGQLTDIPGKIPNS 120

Query: 759  TIPALKRLSLGLFYLVGYTLLSPHITEDYLLTDDYENLHFVFRCMYMLVWGKFVLYKYVT 938
            TIPALKRLSLGLFYLVGYTLLSPHITEDYLLTDDYENLHF+FRCMYMLVWGKFVLYKYVT
Sbjct: 121  TIPALKRLSLGLFYLVGYTLLSPHITEDYLLTDDYENLHFMFRCMYMLVWGKFVLYKYVT 180

Query: 939  CWLVTEGVCILTGLGFNDFDEHGKAKWDACANMKVWLFETNPRFTGTIASFNINTNAWVA 1118
            CWLVTEGVCILTGLGFNDFDEHGKAKWDACANMKVWLFETNPRFTGTIASFNINTNAWVA
Sbjct: 181  CWLVTEGVCILTGLGFNDFDEHGKAKWDACANMKVWLFETNPRFTGTIASFNINTNAWVA 240

Query: 1119 RYFFKRLKFLGNKVXXXXXXXXXXXXWHGLHSGYLVCFQMEFLIVIVERQAASLIQDSPT 1298
            RYFFKRLKFLGNKV            WHGLHSGYLVCFQMEFLIVIVERQAASLIQDSPT
Sbjct: 241  RYFFKRLKFLGNKVLSQGLSLLFLALWHGLHSGYLVCFQMEFLIVIVERQAASLIQDSPT 300

Query: 1299 LSSLASITVLKPFYYLVQQTIHWLFMGYSMTAFCLFTWDKWFKVYKSIYFLGHVFFLSLL 1478
            LSSLASITVLKPFYYLVQQTIHWLFMGYSMTAFCLFTWDKWFKVYKSIYFLGHVFFLSLL
Sbjct: 301  LSSLASITVLKPFYYLVQQTIHWLFMGYSMTAFCLFTWDKWFKVYKSIYFLGHVFFLSLL 360

Query: 1479 FTLPYVRKAMVPRKEKLKKME 1541
            FTLPYVRKAMVPRKEKLKKME
Sbjct: 361  FTLPYVRKAMVPRKEKLKKME 381


>ref|XP_001928378.1| PREDICTED: lysophospholipid acyltransferase 1 [Sus scrofa].
          Length = 492

 Score =  120 bits (300), Expect = 3e-27
 Identities = 111/479 (23%), Positives = 200/479 (41%), Gaps = 26/479 (5%)
 Frame = +3

Query: 162  LNKLATSLGASEQALRLILSIFLGYPLALFYRRYLFYKESY--LIHLFHTFTGLSIAYYN 335
            L+ L+  LG     +  +         A ++R YL   ++   + H F T  G+    + 
Sbjct: 19   LHPLSELLGIPLDQVNFVACQLFALFAAFWFRIYLSPGKTSPDVRHAFATIFGIYFVIFC 78

Query: 336  FGTQLYHSVLCIVLQFLILRLMGRTITAVLTT------FCFQMXXXXXXXXXXXXXNYDI 497
            FG    H      L  L+L   G  +TA ++       F                 +Y I
Sbjct: 79   FGWYSLH------LFVLVLMCYGLMVTASVSNIHRYSFFVAMGYLTICHISRIYIFHYGI 132

Query: 498  KWTM---PHCVLTLKLIGLAMDYFDG-GKDQKSLSSEQQKYAIRGVPSLLEVAGFSYFYG 665
              T    P  ++T K+  LA    DG G+  + LS+EQ + A++  PS LE   +   + 
Sbjct: 133  LTTDFSGPLMIVTQKITTLAFQVHDGLGRRAEDLSTEQHRLAVKAKPSFLEYLSYLLNFM 192

Query: 666  AFLVGPQFSMNHYMKLVQGQ-----LTDIPGKI--------PNSTIPALKRLSLGLFYLV 806
            + + GP  +   Y+  ++G+     L ++  K         P+ T   + +L + L  L+
Sbjct: 193  SVIAGPCNNFKDYVAFIEGRHTHMKLLEVNWKEKGFHSLPEPSPTGAVIHKLCMTLVSLL 252

Query: 807  GYTLLSPHITEDYLLTDDY-ENLHFVFRCMYMLVWGKFVLYKYVTCWLVTEGVCILTGLG 983
             +  L+       L+ D +    +F+ R  Y+ V  +    KY   W + + V    G G
Sbjct: 253  LFLTLTKTFPVTCLVDDWFVHKANFLTRLCYLYVVMQASKPKYYFAWTLADAVNNAAGFG 312

Query: 984  FNDFDEHGKAKWDACANMKVWLFETNPRFTGTIASFNINTNAWVARYFFKRLKFLGNKVX 1163
            F+  D++G   WD  +N+ +W  ET   F   + ++NI T  W+ R  ++R+ +    + 
Sbjct: 313  FSGVDKNGNFSWDLLSNLNIWKIETATSFKMYLENWNIQTATWLKRVCYERVPWYPTVL- 371

Query: 1164 XXXXXXXXXXXWHGLHSGYLVCFQMEFLIVIVERQAASLIQDSPTLSSLASITVLKPFYY 1343
                       WHG++ GY   F    L+ +    AA  ++++     L+S   LK  Y 
Sbjct: 372  ----TFILSALWHGVYPGYYFTFLTGILVTL----AARTVRNNYRHYFLSS-KALKVLYD 422

Query: 1344 LVQQTIHWLFMGYSMTAFCLFTWDKWFKVYKSIYFLGHVFFLSLLFTLPYVRKAMVPRK 1520
            +V   +  L + Y++  F +   +    +YKS+YF  H+  L ++  LP   +A   R+
Sbjct: 423  IVTWAVTQLAVSYTVAPFVMLAVEPTISLYKSMYFYLHIISLLIILFLPIKPQAHTQRR 481


>ref|XP_003354981.1| PREDICTED: lysophospholipid acyltransferase 2-like [Sus scrofa].
          Length = 310

 Score = 68.9 bits (167), Expect = 8e-12
 Identities = 53/230 (23%), Positives = 97/230 (42%), Gaps = 15/230 (6%)
 Frame = +3

Query: 621  VPSLLEVAGFSYFYGAFLVGPQFSMNHYMKLVQGQL--------TDIPGKIPNSTIPALK 776
            +PSLLE   ++  +   L GP  S   Y+  ++G+         +   G     T P+  
Sbjct: 60   MPSLLEYLSYTCNFMGILAGPLCSYKDYITFIEGRSYHAAQSGESGKEGIQGERTEPSPN 119

Query: 777  RLSLGLFYLVGYTLLSPHITEDYLLTDDYE-NLHFVF------RCMYMLVWGKFVLYKYV 935
               +    + G +LL  H+T    L  +Y  ++HF        R +Y+ V       KY 
Sbjct: 120  AAVVQKLLICGLSLLF-HLTICRRLPVEYNIDVHFQATASWPTRVLYLYVSLLAARPKYY 178

Query: 936  TCWLVTEGVCILTGLGFNDFDEHGKAKWDACANMKVWLFETNPRFTGTIASFNINTNAWV 1115
              W + + +    G GF  +D++G A+WD  +N+++   E +  F   + ++NI T  W+
Sbjct: 179  FAWTLADAINNAAGFGFRGYDKNGAARWDLISNLRIQQIEMSTSFKMFLDNWNIQTALWL 238

Query: 1116 ARYFFKRLKFLGNKVXXXXXXXXXXXXWHGLHSGYLVCFQMEFLIVIVER 1265
             R  ++R+                   WHG++ GY + F    ++ +  R
Sbjct: 239  KRVCYERV-----STSPTIQTFILSAIWHGVYPGYYLTFLTGTVMTLAAR 283


>ref|XP_003127465.1| PREDICTED: lysophospholipid acyltransferase 7 isoform 1 [Sus scrofa].
          Length = 472

 Score = 65.1 bits (157), Expect = 1e-10
 Identities = 96/423 (22%), Positives = 151/423 (35%), Gaps = 34/423 (8%)
 Frame = +3

Query: 312  GLSIAYYNFGTQLYHSVLCIVLQFLILRLMGRTITAVLTTFCFQMXXXXXXXXXXXXXNY 491
            GL +  +  G    HS++ I+  + +++    +  A+   + F                 
Sbjct: 38   GLGLTLFTCGPHTLHSLITILGTWALIQAQPCSCHALALAWTFSYLLFFRALSLLGLPTP 97

Query: 492  DIKWTMPHCVLTLKLIGLAMDYFDGGKDQ-KSLSSEQQKYAIRG----VPSLLEVAGFSY 656
                     +LTLKL+ LA +  D    Q K ++S   K    G    VPSL+E   +SY
Sbjct: 98   TPFTNAVQLLLTLKLVSLASEVQDLHMAQRKEMASGFVKGPSLGLLPEVPSLMETLSYSY 157

Query: 657  FYGAFLVGPQFSMNHYMKLVQGQLTDIPGKIPNSTIPALKRL-SLGLFYLVGYTLLSPHI 833
             Y   + GP F    Y+  ++      PG +P S  P L+R     LF L+   LLS HI
Sbjct: 158  CYVGIMTGPFFRYRTYLDWLE---QPFPGAVP-SLRPLLRRAWPAPLFGLL--FLLSSHI 211

Query: 834  TE-DYLLTDDYENLHFVFRCMYML-VWGKFVLYKYVTCWLVTEGVCILTGLGFNDFDEHG 1007
               + +  D +       R  YM+ V+  F +  YV  W+  E  CI  G G        
Sbjct: 212  FPLEAVREDAFYARPLPARLFYMIPVFFAFRMRFYV-AWIAAECGCIAAGFGAYPVAAKA 270

Query: 1008 KA----------------------KWDACANMKVWLFETNPRFTGTIASFNINTNAWVAR 1121
            +A                       ++   N+  +  +   R    +  +N+    W+A+
Sbjct: 271  RAGGGPTLQCPPPSSPEKAASLEYDYETVRNIDCYGTDFCVRVRDGMRYWNMTVQWWLAQ 330

Query: 1122 YFFKRLKFLGNKVXXXXXXXXXXXXWHGLHSGYLVCFQMEFLIVIVERQAASLIQDSPTL 1301
            Y +K      + V            WHGLH GY + F    L +  E    S ++     
Sbjct: 331  YIYKSAP-TRSYVLRSAWTMLLSAYWHGLHPGYYLSFLTIPLCLAAEGCLESALRGR--- 386

Query: 1302 SSLASITVLKPFYYLVQQTIHWLF----MGYSMTAFCLFTWDKWFKVYKSIYFLGHVFFL 1469
                    L P        +HW        Y    F L +     + + SIYF  H+  L
Sbjct: 387  --------LSPGGQKAWDWVHWFLKMRAYDYMCMGFVLLSLGDTLRYWASIYFCIHILAL 438

Query: 1470 SLL 1478
              L
Sbjct: 439  GAL 441


>ref|XP_003360348.1| PREDICTED: probable protein-cysteine N-palmitoyltransferase porcupine
            isoform 3 [Sus scrofa].
          Length = 453

 Score = 54.7 bits (130), Expect = 2e-07
 Identities = 50/191 (26%), Positives = 80/191 (41%), Gaps = 1/191 (0%)
 Frame = +3

Query: 582  SLSSEQQKYAIRGVPSLLEVAGFSYFYGAFLVGPQFSMNHYMKLVQGQLTDIPGKIPNST 761
            SL  +  +  +  VPS +E  G+ YF G  + GP  S + Y++ VQG+       +    
Sbjct: 139  SLGFDLDRGEVGAVPSPVEFMGYLYFVGTIVFGPWISFHSYLQAVQGR------PLSRRW 192

Query: 762  IPALKR-LSLGLFYLVGYTLLSPHITEDYLLTDDYENLHFVFRCMYMLVWGKFVLYKYVT 938
            +  + R L+L L  LV  T + P++   ++  D    L    R     V   F    Y  
Sbjct: 193  LQKVARSLALALLCLVLSTCVGPYLFPYFIPLDGDRLLRKWLRAYESAV--SFHFSNYFV 250

Query: 939  CWLVTEGVCILTGLGFNDFDEHGKAKWDACANMKVWLFETNPRFTGTIASFNINTNAWVA 1118
             +L +E    L G GF +  +H   +WD   + K    E        + S+N+  + W+ 
Sbjct: 251  GFL-SEATATLAGAGFTEEKDH--LEWDLTVS-KPLNVELPRSMVEVVTSWNLPMSYWLN 306

Query: 1119 RYFFKRLKFLG 1151
             Y FK    LG
Sbjct: 307  NYVFKNALRLG 317


>ref|XP_003360346.1| PREDICTED: probable protein-cysteine N-palmitoyltransferase porcupine
            isoform 1 [Sus scrofa].
          Length = 450

 Score = 54.7 bits (130), Expect = 2e-07
 Identities = 50/191 (26%), Positives = 80/191 (41%), Gaps = 1/191 (0%)
 Frame = +3

Query: 582  SLSSEQQKYAIRGVPSLLEVAGFSYFYGAFLVGPQFSMNHYMKLVQGQLTDIPGKIPNST 761
            SL  +  +  +  VPS +E  G+ YF G  + GP  S + Y++ VQG+       +    
Sbjct: 136  SLGFDLDRGEVGAVPSPVEFMGYLYFVGTIVFGPWISFHSYLQAVQGR------PLSRRW 189

Query: 762  IPALKR-LSLGLFYLVGYTLLSPHITEDYLLTDDYENLHFVFRCMYMLVWGKFVLYKYVT 938
            +  + R L+L L  LV  T + P++   ++  D    L    R     V   F    Y  
Sbjct: 190  LQKVARSLALALLCLVLSTCVGPYLFPYFIPLDGDRLLRKWLRAYESAV--SFHFSNYFV 247

Query: 939  CWLVTEGVCILTGLGFNDFDEHGKAKWDACANMKVWLFETNPRFTGTIASFNINTNAWVA 1118
             +L +E    L G GF +  +H   +WD   + K    E        + S+N+  + W+ 
Sbjct: 248  GFL-SEATATLAGAGFTEEKDH--LEWDLTVS-KPLNVELPRSMVEVVTSWNLPMSYWLN 303

Query: 1119 RYFFKRLKFLG 1151
             Y FK    LG
Sbjct: 304  NYVFKNALRLG 314


>ref|XP_003360347.1| PREDICTED: probable protein-cysteine N-palmitoyltransferase porcupine
            isoform 2 [Sus scrofa].
          Length = 456

 Score = 52.8 bits (125), Expect = 6e-07
 Identities = 47/194 (24%), Positives = 84/194 (43%), Gaps = 4/194 (2%)
 Frame = +3

Query: 582  SLSSEQQKYAIRGVPSLLEVAGFSYFYGAFLVGPQFSMNHYMKLVQGQLTDIPGKIPNST 761
            SL  +  +  +  VPS +E  G+ YF G  + GP  S + Y++ VQG+       +    
Sbjct: 136  SLGFDLDRGEVGAVPSPVEFMGYLYFVGTIVFGPWISFHSYLQAVQGR------PLSRRW 189

Query: 762  IPALKR-LSLGLFYLVGYTLLSPHITEDYLLTDDYENLHFVFR-CMYMLVWGKFVLYKYV 935
            +  + R L+L L  LV  T + P++   ++  D    L    R   ++  +   V + + 
Sbjct: 190  LQKVARSLALALLCLVLSTCVGPYLFPYFIPLDGDRLLRNKKRKARWLRAYESAVSFHFS 249

Query: 936  TCWL--VTEGVCILTGLGFNDFDEHGKAKWDACANMKVWLFETNPRFTGTIASFNINTNA 1109
              ++  ++E    L G GF +  +H   +WD   + K    E        + S+N+  + 
Sbjct: 250  NYFVGFLSEATATLAGAGFTEEKDH--LEWDLTVS-KPLNVELPRSMVEVVTSWNLPMSY 306

Query: 1110 WVARYFFKRLKFLG 1151
            W+  Y FK    LG
Sbjct: 307  WLNNYVFKNALRLG 320


>ref|NP_001177352.1| ghrelin O-acyltransferase [Sus scrofa].
          Length = 435

 Score = 51.6 bits (122), Expect = 1e-06
 Identities = 65/291 (22%), Positives = 115/291 (39%), Gaps = 8/291 (2%)
 Frame = +3

Query: 519  VLTLKLIGLAMDYFDGGKDQKSLSSEQQKYAIRGVPSLLEVAGFSYFYGAFLVGPQFSMN 698
            +LT ++  L++D F+G  +  S +   +    + +   L    +  F+ A L GP  S  
Sbjct: 125  LLTQRVTSLSLDIFEGKVEVASEAVGSESSLPKRLWKALPYCSYLLFFPALLGGPLCSFR 184

Query: 699  HYMKLVQGQLTDIPGKIPNSTIP--ALKRLSLGLFYLVGYTLLSPH----ITEDYLLTDD 860
             +   VQG         P S  P  +L  L+     +VG   L       ++    LTD 
Sbjct: 185  RFQSHVQG---------PRSWDPRHSLWALTCQGLQIVGLECLKVAMRWAVSVGAGLTDC 235

Query: 861  YENLHFVFRCMYMLVWGKFVLYK--YVTCWLVTEGVCILTGLGFNDFDEHGKAKWDACAN 1034
             +      +C+Y++ W    L+K  Y + W++ E +    G G       G+  +   A+
Sbjct: 236  RQ-----LQCVYVM-WSMAGLFKLTYYSHWILDESLLQAAGFGSGFGGSTGEESFVPDAD 289

Query: 1035 MKVWLFETNPRFTGTIASFNINTNAWVARYFFKRLKFLGNKVXXXXXXXXXXXXWHGLHS 1214
              +W  ET  + +     +N +T  W+     +RL F   +             WHGLH 
Sbjct: 290  --IWTLETTHKLSLFTRKWNHSTAQWL-----RRLVFQQGRTWPLLQTFVFSAWWHGLHP 342

Query: 1215 GYLVCFQMEFLIVIVERQAASLIQDSPTLSSLASITVLKPFYYLVQQTIHW 1367
            G +      FL   V  +A  LI       + A +++     +L+ +T+ W
Sbjct: 343  GQV----FGFLCWAVMVKADYLIH------TFAKVSIRSQLMWLLYRTLTW 383


>ref|XP_003356093.1| PREDICTED: lysophospholipid acyltransferase 7 isoform 2 [Sus
           scrofa].
          Length = 344

 Score = 49.7 bits (117), Expect = 5e-06
 Identities = 62/232 (26%), Positives = 95/232 (40%), Gaps = 8/232 (3%)
 Frame = +3

Query: 312 GLSIAYYNFGTQLYHSVLCIVLQFLILRLMGRTITAVLTTFCFQMXXXXXXXXXXXXXNY 491
           GL +  +  G    HS++ I+  + +++    +  A+   + F                 
Sbjct: 38  GLGLTLFTCGPHTLHSLITILGTWALIQAQPCSCHALALAWTFSYLLFFRALSLLGLPTP 97

Query: 492 DIKWTMPHCVLTLKLIGLAMDYFDGGKDQ-KSLSSEQQKYAIRG----VPSLLEVAGFSY 656
                    +LTLKL+ LA +  D    Q K ++S   K    G    VPSL+E   +SY
Sbjct: 98  TPFTNAVQLLLTLKLVSLASEVQDLHMAQRKEMASGFVKGPSLGLLPEVPSLMETLSYSY 157

Query: 657 FYGAFLVGPQFSMNHYMKLVQGQLTDIPGKIPNSTIPALKRL-SLGLFYLVGYTLLSPHI 833
            Y   + GP F    Y+  ++      PG +P S  P L+R     LF L+   LLS HI
Sbjct: 158 CYVGIMTGPFFRYRTYLDWLE---QPFPGAVP-SLRPLLRRAWPAPLFGLL--FLLSSHI 211

Query: 834 TE-DYLLTDDYENLHFVFRCMYML-VWGKFVLYKYVTCWLVTEGVCILTGLG 983
              + +  D +       R  YM+ V+  F +  YV  W+  E  CI  G G
Sbjct: 212 FPLEAVREDAFYARPLPARLFYMIPVFFAFRMRFYV-AWIAAECGCIAAGFG 262


  Database: RefSeq49_SP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 11,343,932
  Number of sequences in database:  24,897
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 24897
Number of Hits to DB: 46,925,427
Number of extensions: 1385134
Number of successful extensions: 5876
Number of sequences better than 1.0e-05: 9
Number of HSP's gapped: 5850
Number of HSP's successfully gapped: 9
Length of query: 598
Length of database: 11,343,932
Length adjustment: 105
Effective length of query: 493
Effective length of database: 8,729,747
Effective search space: 4303765271
Effective search space used: 4303765271
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)

Search to RefSeqMP_Rel49

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-013099
         (1795 letters)

Database: RefSeq49_MP.fasta 
           30,036 sequences; 15,617,559 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_660112.1| lysophospholipid acyltransferase 5 [Mus musculu...   816   0.0  
Alignment   gi|NP_705774.1| lysophospholipid acyltransferase 1 [Mus musculu...   119   1e-26
Alignment   gi|NP_080313.2| lysophospholipid acyltransferase 2 isoform a [M...   115   1e-25
Alignment   gi|NP_001076810.1| lysophospholipid acyltransferase 2 isoform b...   109   8e-24
Alignment   gi|NP_665914.1| probable protein-cysteine N-palmitoyltransferas...    54   3e-07
Alignment   gi|NP_058609.1| probable protein-cysteine N-palmitoyltransferas...    54   3e-07
Alignment   gi|NP_665915.1| probable protein-cysteine N-palmitoyltransferas...    52   1e-06
Alignment   gi|NP_076127.1| probable protein-cysteine N-palmitoyltransferas...    50   6e-06

>ref|NP_660112.1| lysophospholipid acyltransferase 5 [Mus musculus].
          Length = 487

 Score =  816 bits (2109), Expect = 0.0
 Identities = 394/487 (80%), Positives = 426/487 (87%)
 Frame = +3

Query: 81   MASAAEGDVGAVVELAGVLRWVLQELSLNKLATSLGASEQALRLILSIFLGYPLALFYRR 260
            MAS A+GD+G  +E    L   +++LSLNKLATSLGASEQALRLI SIFLGYPLALFYR 
Sbjct: 1    MASTADGDMGETLEQMRGLWPGVEDLSLNKLATSLGASEQALRLIFSIFLGYPLALFYRH 60

Query: 261  YLFYKESYLIHLFHTFTGLSIAYYNFGTQLYHSVLCIVLQFLILRLMGRTITAVLTTFCF 440
            YLFYK+SYLIHLFHTFTGLSIAY+NFG Q YHS+LC+VLQFLILRLMGRT+TAV+TT CF
Sbjct: 61   YLFYKDSYLIHLFHTFTGLSIAYFNFGHQFYHSLLCVVLQFLILRLMGRTVTAVITTLCF 120

Query: 441  QMXXXXXXXXXXXXXNYDIKWTMPHCVLTLKLIGLAMDYFDGGKDQKSLSSEQQKYAIRG 620
            QM             +YDIKWTMPHCVLTLKLIGL +DY+DGGKD  SL+SEQQKYAIRG
Sbjct: 121  QMAYLLAGYYYTATGDYDIKWTMPHCVLTLKLIGLCIDYYDGGKDGNSLTSEQQKYAIRG 180

Query: 621  VPSLLEVAGFSYFYGAFLVGPQFSMNHYMKLVQGQLTDIPGKIPNSTIPALKRLSLGLFY 800
            VPSLLEVAGFSYFYGAFLVGPQFSMNHYMKLV+GQLTDIPGK+PNSTIPALKRLSLGL Y
Sbjct: 181  VPSLLEVAGFSYFYGAFLVGPQFSMNHYMKLVRGQLTDIPGKMPNSTIPALKRLSLGLVY 240

Query: 801  LVGYTLLSPHITEDYLLTDDYENLHFVFRCMYMLVWGKFVLYKYVTCWLVTEGVCILTGL 980
            LVGYTLLSPHIT+DYLLT+DY+N  F FRCMYML+WGKFVLYKYVTCWLVTEGVCIL+GL
Sbjct: 241  LVGYTLLSPHITDDYLLTEDYDNRPFWFRCMYMLIWGKFVLYKYVTCWLVTEGVCILSGL 300

Query: 981  GFNDFDEHGKAKWDACANMKVWLFETNPRFTGTIASFNINTNAWVARYFFKRLKFLGNKV 1160
            GFN FDE+G  +WDACANMKVWLFET PRF GTIASFNINTNAWVARY FKRLKFLGNK 
Sbjct: 301  GFNGFDENGTVRWDACANMKVWLFETTPRFNGTIASFNINTNAWVARYIFKRLKFLGNKE 360

Query: 1161 XXXXXXXXXXXXWHGLHSGYLVCFQMEFLIVIVERQAASLIQDSPTLSSLASITVLKPFY 1340
                        WHGLHSGYL+CFQMEFLIVIVE+Q +SLI+DSP LSSLASIT L+PFY
Sbjct: 361  LSQGLSLLFLALWHGLHSGYLICFQMEFLIVIVEKQVSSLIRDSPALSSLASITALQPFY 420

Query: 1341 YLVQQTIHWLFMGYSMTAFCLFTWDKWFKVYKSIYFLGHVFFLSLLFTLPYVRKAMVPRK 1520
            YLVQQTIHWLFMGYSMTAFCLFTWDKW KVY+SIYFLGHVFFLSLLF LPY+ KAMVPRK
Sbjct: 421  YLVQQTIHWLFMGYSMTAFCLFTWDKWLKVYRSIYFLGHVFFLSLLFILPYIHKAMVPRK 480

Query: 1521 EKLKKME 1541
            EKLKK E
Sbjct: 481  EKLKKRE 487


>ref|NP_705774.1| lysophospholipid acyltransferase 1 [Mus musculus].
          Length = 492

 Score =  119 bits (297), Expect = 1e-26
 Identities = 107/471 (22%), Positives = 193/471 (40%), Gaps = 28/471 (5%)
 Frame = +3

Query: 162  LNKLATSLGASEQALRLILSIFLGYPLALFYRRYLFYKESY--LIHLFHTFTGLSIAYYN 335
            L+ L+  LG     +  +         A ++R YL   ++   + H   T  G+    + 
Sbjct: 19   LHPLSQLLGIPLDQVNFVACQLFALSAAFWFRIYLHPGKASPEVRHTLATILGIYFVVFC 78

Query: 336  FGTQLYHSVLCIVLQFLILRLMGRTITAVLTT------FCFQMXXXXXXXXXXXXXNYDI 497
            FG    H      L  L+L   G  +TA ++       F                 +Y I
Sbjct: 79   FGWYAVH------LFVLVLMCYGVMVTASVSNIHRYSFFVAMGYLTICHISRIYIFHYGI 132

Query: 498  KWTM---PHCVLTLKLIGLAMDYFDG-GKDQKSLSSEQQKYAIRGVPSLLEVAGFSYFYG 665
              T    P  ++T K+  LA    DG G+  + LS+EQ + A++  PSLLE   +   + 
Sbjct: 133  LTTDFSGPLMIVTQKITTLAFQVHDGLGRKAEDLSAEQHRLAVKAKPSLLEYLSYHLNFM 192

Query: 666  AFLVGPQFSMNHYMKLVQGQ---------------LTDIPGKIPNSTIPALKRLSLGLFY 800
            + + GP  +   Y+  ++G+                  +P   P   +  +++L + L  
Sbjct: 193  SVIAGPCNNFKDYVAFIEGRHIHMKLLEVNWTQRGFQSLPEPSPMGAV--IQKLCVTLMS 250

Query: 801  LVGYTLLSPHITEDYLLTDDY-ENLHFVFRCMYMLVWGKFVLYKYVTCWLVTEGVCILTG 977
            L+ +  LS      +L+ D +    +F+ R  Y+ V  +    KY   W + + V    G
Sbjct: 251  LLLFLTLSKSFPVTFLIDDWFVHKANFLSRLWYLYVVMQAAKPKYYFAWTLADAVHNAAG 310

Query: 978  LGFNDFDEHGKAKWDACANMKVWLFETNPRFTGTIASFNINTNAWVARYFFKRLKFLGNK 1157
             GFN  D  GK++WD  +N+ +W  ET   F   + ++NI T+ W+    ++R+ +    
Sbjct: 311  FGFNGMDTDGKSRWDLLSNLNIWKIETATSFKMYLENWNIQTSTWLKCVCYERVPWYPTV 370

Query: 1158 VXXXXXXXXXXXXWHGLHSGYLVCFQMEFLIVIVERQAASLIQDSPTLSSLASITVLKPF 1337
            +            WHG++ GY       FL  +    AA  ++++     L+S    K  
Sbjct: 371  L-----TFLLSALWHGVYPGY----YFTFLTGVPVTLAARAVRNNYRHHFLSS-KARKIA 420

Query: 1338 YYLVQQTIHWLFMGYSMTAFCLFTWDKWFKVYKSIYFLGHVFFLSLLFTLP 1490
            Y +V   +  L + Y+   F +   +    +YKS++F  H+  L ++  LP
Sbjct: 421  YDVVTWAVTQLAVSYTAAPFVMLAVEPTISLYKSVFFFLHIICLLIILFLP 471


>ref|NP_080313.2| lysophospholipid acyltransferase 2 isoform a [Mus musculus].
          Length = 519

 Score =  115 bits (288), Expect = 1e-25
 Identities = 100/440 (22%), Positives = 184/440 (41%), Gaps = 24/440 (5%)
 Frame = +3

Query: 243  ALFYRRYLFYKE--SYLIHLFHTFTGLSIAYYNFGTQLYHSVLCIVLQFLILRLMGRTIT 416
            A+++R YL   +  S++ H+  T  GL +A++ FG    H ++   + + I+ + G    
Sbjct: 39   AVWFRTYLHSSKTSSFIRHVVATLLGLYLAFFCFGWYALHFLVQSGISYCIMIIAG---V 95

Query: 417  AVLTTFCFQMXXXXXXXXXXXXX------NYDIKWTMPHCVLTLKLIGLAMDYFDGG-KD 575
              +   CF                      Y   ++ P  ++T K+  LA +  DG  + 
Sbjct: 96   ESMQQCCFVFALGYLSVCQITRVYIFDYGQYSADFSGPMMIITQKITSLAYEIHDGMFRK 155

Query: 576  QKSLSSEQQKYAIRGVPSLLEVAGFSYFYGAFLVGPQFSMNHYMKLVQGQLTDIP----- 740
             + L+  Q+  A+R +PSLLE   ++  +   L GP  S   Y+  ++G+ + +      
Sbjct: 156  DEELTPSQRGLAVRRMPSLLEYVSYTCNFMGILAGPLCSYKDYIAFIEGRASHVAQPSEN 215

Query: 741  ------GKI---PNSTIPALKRLSLGLFYLVGYTLLSPHITEDYLLTDDYE-NLHFVFRC 890
                  GK    PN+ +   K L  GL  L   T+ S  +  +Y + + ++    +  + 
Sbjct: 216  GKDEQHGKADPSPNAAVTE-KLLVCGLSLLFHLTI-SNMLPVEYNIDEHFQATASWPTKA 273

Query: 891  MYMLVWGKFVLYKYVTCWLVTEGVCILTGLGFNDFDEHGKAKWDACANMKVWLFETNPRF 1070
             Y+ V       KY   W + + +    G GF  +D++G A+WD  +N+++   E +  F
Sbjct: 274  TYLYVSLLAARPKYYFAWTLADAINNAAGFGFRGYDKNGVARWDLISNLRIQQIEMSTSF 333

Query: 1071 TGTIASFNINTNAWVARYFFKRLKFLGNKVXXXXXXXXXXXXWHGLHSGYLVCFQMEFLI 1250
               + ++NI T  W+ R  ++R  F                 WHG++ GY + F    L+
Sbjct: 334  KMFLDNWNIQTALWLKRVCYERATF-----SPTIQTFFLSAIWHGVYPGYYLTFLTGVLM 388

Query: 1251 VIVERQAASLIQDSPTLSSLASITVLKPFYYLVQQTIHWLFMGYSMTAFCLFTWDKWFKV 1430
             +  R   +  +             LK FY L+      + + Y++  F L +    F  
Sbjct: 389  TLAARAVRNNFR-----HYFLEPPQLKLFYDLITWVATQITISYTVVPFVLLSIKPSFTF 443

Query: 1431 YKSIYFLGHVFFLSLLFTLP 1490
            Y S Y+  HV  + +L  LP
Sbjct: 444  YSSWYYCLHVCSILVLLLLP 463


>ref|NP_001076810.1| lysophospholipid acyltransferase 2 isoform b [Mus musculus].
          Length = 487

 Score =  109 bits (272), Expect = 8e-24
 Identities = 97/434 (22%), Positives = 178/434 (41%), Gaps = 18/434 (4%)
 Frame = +3

Query: 243  ALFYRRYLFYKE--SYLIHLFHTFTGLSIAYYNFGTQLYHSVLCIVLQFLILRLMGRTIT 416
            A+++R YL   +  S++ H+  T  GL +A++ FG    H ++   + + I+ + G    
Sbjct: 39   AVWFRTYLHSSKTSSFIRHVVATLLGLYLAFFCFGWYALHFLVQSGISYCIMIIAGVE-- 96

Query: 417  AVLTTFCFQMXXXXXXXXXXXXXNYDIKWTMPHCVLTLKLIGLAMDYFDGG-KDQKSLSS 593
                                           P  ++T K+  LA +  DG  +  + L+ 
Sbjct: 97   ---------------------------SMQHPMMIITQKITSLAYEIHDGMFRKDEELTP 129

Query: 594  EQQKYAIRGVPSLLEVAGFSYFYGAFLVGPQFSMNHYMKLVQGQLTDIP----------- 740
             Q+  A+R +PSLLE   ++  +   L GP  S   Y+  ++G+ + +            
Sbjct: 130  SQRGLAVRRMPSLLEYVSYTCNFMGILAGPLCSYKDYIAFIEGRASHVAQPSENGKDEQH 189

Query: 741  GKI---PNSTIPALKRLSLGLFYLVGYTLLSPHITEDYLLTDDYE-NLHFVFRCMYMLVW 908
            GK    PN+ +   K L  GL  L   T+ S  +  +Y + + ++    +  +  Y+ V 
Sbjct: 190  GKADPSPNAAVTE-KLLVCGLSLLFHLTI-SNMLPVEYNIDEHFQATASWPTKATYLYVS 247

Query: 909  GKFVLYKYVTCWLVTEGVCILTGLGFNDFDEHGKAKWDACANMKVWLFETNPRFTGTIAS 1088
                  KY   W + + +    G GF  +D++G A+WD  +N+++   E +  F   + +
Sbjct: 248  LLAARPKYYFAWTLADAINNAAGFGFRGYDKNGVARWDLISNLRIQQIEMSTSFKMFLDN 307

Query: 1089 FNINTNAWVARYFFKRLKFLGNKVXXXXXXXXXXXXWHGLHSGYLVCFQMEFLIVIVERQ 1268
            +NI T  W+ R  ++R  F                 WHG++ GY + F    L+ +  R 
Sbjct: 308  WNIQTALWLKRVCYERATF-----SPTIQTFFLSAIWHGVYPGYYLTFLTGVLMTLAARA 362

Query: 1269 AASLIQDSPTLSSLASITVLKPFYYLVQQTIHWLFMGYSMTAFCLFTWDKWFKVYKSIYF 1448
              +  +             LK FY L+      + + Y++  F L +    F  Y S Y+
Sbjct: 363  VRNNFR-----HYFLEPPQLKLFYDLITWVATQITISYTVVPFVLLSIKPSFTFYSSWYY 417

Query: 1449 LGHVFFLSLLFTLP 1490
              HV  + +L  LP
Sbjct: 418  CLHVCSILVLLLLP 431


>ref|NP_665914.1| probable protein-cysteine N-palmitoyltransferase porcupine isoform
            Mporc-c [Mus musculus].
          Length = 455

 Score = 54.3 bits (129), Expect = 3e-07
 Identities = 45/193 (23%), Positives = 84/193 (43%), Gaps = 3/193 (1%)
 Frame = +3

Query: 582  SLSSEQQKYAIRGVPSLLEVAGFSYFYGAFLVGPQFSMNHYMKLVQGQLTDIPGKIPNST 761
            SL  +  +  +  VPS +E  G+ YF G  + GP  S + Y++ VQG+       +    
Sbjct: 136  SLGFDLDRGEVGAVPSPVEFMGYLYFVGTIVFGPWISFHSYLQAVQGR------PLSRRW 189

Query: 762  IPALKR-LSLGLFYLVGYTLLSPHITEDYLLTDDYENLHFVFRCMYMLVWGKFVLYKYVT 938
            +  + R L+L L  LV  T + P++   ++  D    L       ++  +   V + +  
Sbjct: 190  LKKVARSLALALLCLVLSTCVGPYLFPYFIPLDGDRLLRKGTMVRWLRAYESAVSFHFSN 249

Query: 939  CWL--VTEGVCILTGLGFNDFDEHGKAKWDACANMKVWLFETNPRFTGTIASFNINTNAW 1112
             ++  ++E    L G GF +  +H   +WD   +  + + E        + S+N+  + W
Sbjct: 250  YFVGFLSEATATLAGAGFTEEKDH--LEWDLTVSRPLNV-ELPRSMVEVVTSWNLPMSYW 306

Query: 1113 VARYFFKRLKFLG 1151
            +  Y FK    LG
Sbjct: 307  LNNYVFKNALRLG 319


>ref|NP_058609.1| probable protein-cysteine N-palmitoyltransferase porcupine isoform
            Mporc-a [Mus musculus].
          Length = 450

 Score = 54.3 bits (129), Expect = 3e-07
 Identities = 49/191 (25%), Positives = 81/191 (42%), Gaps = 1/191 (0%)
 Frame = +3

Query: 582  SLSSEQQKYAIRGVPSLLEVAGFSYFYGAFLVGPQFSMNHYMKLVQGQLTDIPGKIPNST 761
            SL  +  +  +  VPS +E  G+ YF G  + GP  S + Y++ VQG+       +    
Sbjct: 136  SLGFDLDRGEVGAVPSPVEFMGYLYFVGTIVFGPWISFHSYLQAVQGR------PLSRRW 189

Query: 762  IPALKR-LSLGLFYLVGYTLLSPHITEDYLLTDDYENLHFVFRCMYMLVWGKFVLYKYVT 938
            +  + R L+L L  LV  T + P++   ++  D    L    R     V   F    Y  
Sbjct: 190  LKKVARSLALALLCLVLSTCVGPYLFPYFIPLDGDRLLRKWLRAYESAV--SFHFSNYFV 247

Query: 939  CWLVTEGVCILTGLGFNDFDEHGKAKWDACANMKVWLFETNPRFTGTIASFNINTNAWVA 1118
             +L +E    L G GF +  +H   +WD   +  + + E        + S+N+  + W+ 
Sbjct: 248  GFL-SEATATLAGAGFTEEKDH--LEWDLTVSRPLNV-ELPRSMVEVVTSWNLPMSYWLN 303

Query: 1119 RYFFKRLKFLG 1151
             Y FK    LG
Sbjct: 304  NYVFKNALRLG 314


>ref|NP_665915.1| probable protein-cysteine N-palmitoyltransferase porcupine isoform
            Mporc-b [Mus musculus].
          Length = 456

 Score = 52.4 bits (124), Expect = 1e-06
 Identities = 46/194 (23%), Positives = 85/194 (43%), Gaps = 4/194 (2%)
 Frame = +3

Query: 582  SLSSEQQKYAIRGVPSLLEVAGFSYFYGAFLVGPQFSMNHYMKLVQGQLTDIPGKIPNST 761
            SL  +  +  +  VPS +E  G+ YF G  + GP  S + Y++ VQG+       +    
Sbjct: 136  SLGFDLDRGEVGAVPSPVEFMGYLYFVGTIVFGPWISFHSYLQAVQGR------PLSRRW 189

Query: 762  IPALKR-LSLGLFYLVGYTLLSPHITEDYLLTDDYENLHFVFR-CMYMLVWGKFVLYKYV 935
            +  + R L+L L  LV  T + P++   ++  D    L    R   ++  +   V + + 
Sbjct: 190  LKKVARSLALALLCLVLSTCVGPYLFPYFIPLDGDRLLRNKKRKARWLRAYESAVSFHFS 249

Query: 936  TCWL--VTEGVCILTGLGFNDFDEHGKAKWDACANMKVWLFETNPRFTGTIASFNINTNA 1109
              ++  ++E    L G GF +  +H   +WD   +  + + E        + S+N+  + 
Sbjct: 250  NYFVGFLSEATATLAGAGFTEEKDH--LEWDLTVSRPLNV-ELPRSMVEVVTSWNLPMSY 306

Query: 1110 WVARYFFKRLKFLG 1151
            W+  Y FK    LG
Sbjct: 307  WLNNYVFKNALRLG 320


>ref|NP_076127.1| probable protein-cysteine N-palmitoyltransferase porcupine isoform
            Mporc-d [Mus musculus].
          Length = 461

 Score = 50.1 bits (118), Expect = 6e-06
 Identities = 46/199 (23%), Positives = 85/199 (42%), Gaps = 9/199 (4%)
 Frame = +3

Query: 582  SLSSEQQKYAIRGVPSLLEVAGFSYFYGAFLVGPQFSMNHYMKLVQGQLTDIPGKIPNST 761
            SL  +  +  +  VPS +E  G+ YF G  + GP  S + Y++ VQG+       +    
Sbjct: 136  SLGFDLDRGEVGAVPSPVEFMGYLYFVGTIVFGPWISFHSYLQAVQGR------PLSRRW 189

Query: 762  IPALKR-LSLGLFYLVGYTLLSPHITEDYLLTDDYENLHFVFR------CMYMLVWGKFV 920
            +  + R L+L L  LV  T + P++   ++  D    L    R        ++  +   V
Sbjct: 190  LKKVARSLALALLCLVLSTCVGPYLFPYFIPLDGDRLLRNKKRKARGTMVRWLRAYESAV 249

Query: 921  LYKYVTCWL--VTEGVCILTGLGFNDFDEHGKAKWDACANMKVWLFETNPRFTGTIASFN 1094
             + +   ++  ++E    L G GF +  +H   +WD   +  + + E        + S+N
Sbjct: 250  SFHFSNYFVGFLSEATATLAGAGFTEEKDH--LEWDLTVSRPLNV-ELPRSMVEVVTSWN 306

Query: 1095 INTNAWVARYFFKRLKFLG 1151
            +  + W+  Y FK    LG
Sbjct: 307  LPMSYWLNNYVFKNALRLG 325


  Database: RefSeq49_MP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 15,617,559
  Number of sequences in database:  30,036
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 30036
Number of Hits to DB: 62,967,965
Number of extensions: 1808036
Number of successful extensions: 7145
Number of sequences better than 1.0e-05: 8
Number of HSP's gapped: 7106
Number of HSP's successfully gapped: 8
Length of query: 598
Length of database: 15,617,559
Length adjustment: 107
Effective length of query: 491
Effective length of database: 12,403,707
Effective search space: 6090220137
Effective search space used: 6090220137
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)

Search to RefSeqHP_Rel49

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-013099
         (1795 letters)

Database: RefSeq49_HP.fasta 
           32,964 sequences; 18,297,164 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_005759.4| lysophospholipid acyltransferase 5 [Homo sapien...   860   0.0  
Alignment   gi|NP_620154.2| lysophospholipid acyltransferase 2 [Homo sapien...   116   8e-26
Alignment   gi|NP_001073949.1| lysophospholipid acyltransferase 1 [Homo sap...   109   9e-24
Alignment   gi|NP_077274.3| lysophospholipid acyltransferase 7 isoform 1 [H...    65   2e-10
Alignment   gi|NP_001139528.1| lysophospholipid acyltransferase 7 isoform 2...    58   3e-08
Alignment   gi|NP_001139555.1| lysophospholipid acyltransferase 7 isoform 2...    58   3e-08
Alignment   gi|NP_982300.1| probable protein-cysteine N-palmitoyltransferas...    51   3e-06
Alignment   gi|NP_073736.2| probable protein-cysteine N-palmitoyltransferas...    51   3e-06
Alignment   gi|NP_982299.1| probable protein-cysteine N-palmitoyltransferas...    50   5e-06

>ref|NP_005759.4| lysophospholipid acyltransferase 5 [Homo sapiens].
          Length = 487

 Score =  860 bits (2223), Expect = 0.0
 Identities = 421/487 (86%), Positives = 438/487 (89%)
 Frame = +3

Query: 81   MASAAEGDVGAVVELAGVLRWVLQELSLNKLATSLGASEQALRLILSIFLGYPLALFYRR 260
            MAS+AEGD G VV LAGVL+   QELSLNKLATSLGASEQALRLI+SIFLGYP ALFYR 
Sbjct: 1    MASSAEGDEGTVVALAGVLQSGFQELSLNKLATSLGASEQALRLIISIFLGYPFALFYRH 60

Query: 261  YLFYKESYLIHLFHTFTGLSIAYYNFGTQLYHSVLCIVLQFLILRLMGRTITAVLTTFCF 440
            YLFYKE+YLIHLFHTFTGLSIAY+NFG QLYHS+LCIVLQFLILRLMGRTITAVLTTFCF
Sbjct: 61   YLFYKETYLIHLFHTFTGLSIAYFNFGNQLYHSLLCIVLQFLILRLMGRTITAVLTTFCF 120

Query: 441  QMXXXXXXXXXXXXXNYDIKWTMPHCVLTLKLIGLAMDYFDGGKDQKSLSSEQQKYAIRG 620
            QM             NYDIKWTMPHCVLTLKLIGLA+DYFDGGKDQ SLSSEQQKYAIRG
Sbjct: 121  QMAYLLAGYYYTATGNYDIKWTMPHCVLTLKLIGLAVDYFDGGKDQNSLSSEQQKYAIRG 180

Query: 621  VPSLLEVAGFSYFYGAFLVGPQFSMNHYMKLVQGQLTDIPGKIPNSTIPALKRLSLGLFY 800
            VPSLLEVAGFSYFYGAFLVGPQFSMNHYMKLVQG+L DIPGKIPNS IPALKRLSLGLFY
Sbjct: 181  VPSLLEVAGFSYFYGAFLVGPQFSMNHYMKLVQGELIDIPGKIPNSIIPALKRLSLGLFY 240

Query: 801  LVGYTLLSPHITEDYLLTDDYENLHFVFRCMYMLVWGKFVLYKYVTCWLVTEGVCILTGL 980
            LVGYTLLSPHITEDYLLT+DY+N  F FRCMYML+WGKFVLYKYVTCWLVTEGVCILTGL
Sbjct: 241  LVGYTLLSPHITEDYLLTEDYDNHPFWFRCMYMLIWGKFVLYKYVTCWLVTEGVCILTGL 300

Query: 981  GFNDFDEHGKAKWDACANMKVWLFETNPRFTGTIASFNINTNAWVARYFFKRLKFLGNKV 1160
            GFN F+E GKAKWDACANMKVWLFETNPRFTGTIASFNINTNAWVARY FKRLKFLGNK 
Sbjct: 301  GFNGFEEKGKAKWDACANMKVWLFETNPRFTGTIASFNINTNAWVARYIFKRLKFLGNKE 360

Query: 1161 XXXXXXXXXXXXWHGLHSGYLVCFQMEFLIVIVERQAASLIQDSPTLSSLASITVLKPFY 1340
                        WHGLHSGYLVCFQMEFLIVIVERQAA LIQ+SPTLS LA+ITVL+PFY
Sbjct: 361  LSQGLSLLFLALWHGLHSGYLVCFQMEFLIVIVERQAARLIQESPTLSKLAAITVLQPFY 420

Query: 1341 YLVQQTIHWLFMGYSMTAFCLFTWDKWFKVYKSIYFLGHVFFLSLLFTLPYVRKAMVPRK 1520
            YLVQQTIHWLFMGYSMTAFCLFTWDKW KVYKSIYFLGH+FFLSLLF LPY+ KAMVPRK
Sbjct: 421  YLVQQTIHWLFMGYSMTAFCLFTWDKWLKVYKSIYFLGHIFFLSLLFILPYIHKAMVPRK 480

Query: 1521 EKLKKME 1541
            EKLKKME
Sbjct: 481  EKLKKME 487


>ref|NP_620154.2| lysophospholipid acyltransferase 2 [Homo sapiens].
          Length = 520

 Score =  116 bits (290), Expect = 8e-26
 Identities = 96/440 (21%), Positives = 184/440 (41%), Gaps = 24/440 (5%)
 Frame = +3

Query: 243  ALFYRRYLFYKE--SYLIHLFHTFTGLSIAYYNFGTQLYHSVLCIVLQFLILRLMGRTIT 416
            A+++R YL   +  S++ H+  T  GL +A + FG    H ++   + + I+ ++G    
Sbjct: 39   AIWFRTYLHSSKTSSFIRHVVATLLGLYLALFCFGWYALHFLVQSGISYCIMIIIG---V 95

Query: 417  AVLTTFCFQMXXXXXXXXXXXXX------NYDIKWTMPHCVLTLKLIGLAMDYFDGG-KD 575
              +  +CF                      Y   ++ P  ++T K+  LA +  DG  + 
Sbjct: 96   ENMHNYCFVFALGYLTVCQVTRVYIFDYGQYSADFSGPMMIITQKITSLACEIHDGMFRK 155

Query: 576  QKSLSSEQQKYAIRGVPSLLEVAGFSYFYGAFLVGPQFSMNHYMKLVQGQLTDIPGKIPN 755
             + L+S Q+  A+R +PSLLE   ++  +   L GP  S   Y+  ++G+   I     N
Sbjct: 156  DEELTSSQRDLAVRRMPSLLEYLSYNCNFMGILAGPLCSYKDYITFIEGRSYHITQSGEN 215

Query: 756  --------------STIPALKRLSLGLFYLVGYTLLSPHITEDYLLTDDYE-NLHFVFRC 890
                          +T    K L  GL  L   T+ +  +  +Y + + ++    +  + 
Sbjct: 216  GKEETQYERTEPSPNTAVVQKLLVCGLSLLFHLTICTT-LPVEYNIDEHFQATASWPTKI 274

Query: 891  MYMLVWGKFVLYKYVTCWLVTEGVCILTGLGFNDFDEHGKAKWDACANMKVWLFETNPRF 1070
            +Y+ +       KY   W + + +    G GF  +DE+G A+WD  +N+++   E +  F
Sbjct: 275  IYLYISLLAARPKYYFAWTLADAINNAAGFGFRGYDENGAARWDLISNLRIQQIEMSTSF 334

Query: 1071 TGTIASFNINTNAWVARYFFKRLKFLGNKVXXXXXXXXXXXXWHGLHSGYLVCFQMEFLI 1250
               + ++NI T  W+ R  ++R  F                 WHG++ GY + F    L+
Sbjct: 335  KMFLDNWNIQTALWLKRVCYERTSF-----SPTIQTFILSAIWHGVYPGYYLTFLTGVLM 389

Query: 1251 VIVERQAASLIQDSPTLSSLASITVLKPFYYLVQQTIHWLFMGYSMTAFCLFTWDKWFKV 1430
             +  R   +  +           + LK FY ++   +  + + Y++  F L +       
Sbjct: 390  TLAARAMRNNFR-----HYFIEPSQLKLFYDVITWIVTQVAISYTVVPFVLLSIKPSLTF 444

Query: 1431 YKSIYFLGHVFFLSLLFTLP 1490
            Y S Y+  H+  + +L  LP
Sbjct: 445  YSSWYYCLHILGILVLLLLP 464


>ref|NP_001073949.1| lysophospholipid acyltransferase 1 [Homo sapiens].
          Length = 495

 Score =  109 bits (272), Expect = 9e-24
 Identities = 105/473 (22%), Positives = 194/473 (41%), Gaps = 20/473 (4%)
 Frame = +3

Query: 162  LNKLATSLGASEQALRLILSIFLGYPLALFYRRYLF--YKESYLIHLFHTFTGLSIAYYN 335
            L+ L+  LG     +  ++   +    A ++R YL      S + H   T  G+    + 
Sbjct: 20   LHPLSELLGIPLDQVNFVVCQLVALFAAFWFRIYLRPGTTSSDVRHAVATIFGIYFVIFC 79

Query: 336  FGTQLYHSVLCIVLQFLILRLMGRTITAVLTTFCFQMXXXXXXXXXXXXXNYDIKWTM-- 509
            FG    H  + +++ + I+     +     + F                 +Y I  T   
Sbjct: 80   FGWYSVHLFVLVLMCYAIMVTASVSNIHRYSFFVAMGYLTICHISRIYIFHYGILTTDFS 139

Query: 510  -PHCVLTLKLIGLAMDYFDG-GKDQKSLSSEQQKYAIRGVPSLLEVAGFSYFYGAFLVGP 683
             P  ++T K+  LA    DG G+  + LS+EQ + AI+  PS LE   +   + + + GP
Sbjct: 140  GPLMIVTQKITTLAFQVHDGLGRRAEDLSAEQHRLAIKVKPSFLEYLSYLLNFMSVIAGP 199

Query: 684  QFSMNHYMKLVQGQ-----LTDIPGKI--------PNSTIPALKRLSLGLFYLVGYTLLS 824
              +   Y+  ++G+     L ++  K         P+ T   + +L + L  L+ +  L+
Sbjct: 200  CNNFKDYIAFIEGKHIHMKLLEVNWKRKGFHSLPEPSPTGAVIHKLGITLVSLLLFLTLT 259

Query: 825  PHITEDYLLTDDY-ENLHFVFRCMYMLVWGKFVLYKYVTCWLVTEGVCILTGLGFNDFDE 1001
                   L+ D +     F  R  Y+ V  +    KY   W + + V    G GF+  D+
Sbjct: 260  KTFPVTCLVDDWFVHKASFPARLCYLYVVMQASKPKYYFAWTLADAVNNAAGFGFSGVDK 319

Query: 1002 HGKAKWDACANMKVWLFETNPRFTGTIASFNINTNAWVARYFFKRLKFLGNKVXXXXXXX 1181
            +G   WD  +N+ +W  ET   F   + ++NI T  W+    ++R+ +    +       
Sbjct: 320  NGNFCWDLLSNLNIWKIETATSFKMYLENWNIQTATWLKCVCYQRVPWYPTVL-----TF 374

Query: 1182 XXXXXWHGLHSGYLVCFQMEFLIVIVERQAASLIQDSPTLSSLASITVLKPFYYLVQQTI 1361
                 WHG++ GY   F    L+ +    AA  ++++     L+S   LK  Y      +
Sbjct: 375  ILSALWHGVYPGYYFTFLTGILVTL----AARAVRNNYRHYFLSS-RALKAVYDAGTWAV 429

Query: 1362 HWLFMGYSMTAFCLFTWDKWFKVYKSIYFLGHVFFLSLLFTLPYVRKAMVPRK 1520
              L + Y++  F +   +    +YKS+YF  H+  L ++  LP   +A   R+
Sbjct: 430  TQLAVSYTVAPFVMLAVEPTISLYKSMYFYLHIISLLIILFLPMKPQAHTQRR 482


>ref|NP_077274.3| lysophospholipid acyltransferase 7 isoform 1 [Homo sapiens].
          Length = 472

 Score = 65.5 bits (158), Expect = 2e-10
 Identities = 95/423 (22%), Positives = 152/423 (35%), Gaps = 34/423 (8%)
 Frame = +3

Query: 312  GLSIAYYNFGTQLYHSVLCIVLQFLILRLMGRTITAVLTTFCFQMXXXXXXXXXXXXXNY 491
            GL +  +  G    HS++ I+  + +++    +  A+   + F                 
Sbjct: 38   GLGLTLFTCGPHTLHSLVTILGTWALIQAQPCSCHALALAWTFSYLLFFRALSLLGLPTP 97

Query: 492  DIKWTMPHCVLTLKLIGLAMDYFDGGKDQ-KSLSSEQQKYAIRG----VPSLLEVAGFSY 656
                     +LTLKL+ LA +  D    Q K ++S   K    G    VPSL+E   +SY
Sbjct: 98   TPFTNAVQLLLTLKLVSLASEVQDLHLAQRKEMASGFSKGPTLGLLPDVPSLMETLSYSY 157

Query: 657  FYGAFLVGPQFSMNHYMKLVQGQLTDIPGKIPNSTIPALKRL-SLGLFYLVGYTLLSPHI 833
             Y   + GP F    Y+  ++      PG +P S  P L+R     LF L+   LLS H+
Sbjct: 158  CYVGIMTGPFFRYRTYLDWLE---QPFPGAVP-SLRPLLRRAWPAPLFGLL--FLLSSHL 211

Query: 834  TE-DYLLTDDYENLHFVFRCMYML-VWGKFVLYKYVTCWLVTEGVCILTGLGFNDFDEHG 1007
               + +  D +       R  YM+ V+  F +  YV  W+  E  CI  G G        
Sbjct: 212  FPLEAVREDAFYARPLPARLFYMIPVFFAFRMRFYVA-WIAAECGCIAAGFGAYPVAAKA 270

Query: 1008 KA----------------------KWDACANMKVWLFETNPRFTGTIASFNINTNAWVAR 1121
            +A                       ++   N+  +  +   R    +  +N+    W+A+
Sbjct: 271  RAGGGPTLQCPPPSSPEKAASLEYDYETIRNIDCYSTDFCVRVRDGMRYWNMTVQWWLAQ 330

Query: 1122 YFFKRLKFLGNKVXXXXXXXXXXXXWHGLHSGYLVCFQMEFLIVIVERQAASLIQDSPTL 1301
            Y +K      + V            WHGLH GY + F    L +  E +  S ++     
Sbjct: 331  YIYKSAP-ARSYVLRSAWTMLLSAYWHGLHPGYYLSFLTIPLCLAAEGRLESALRGR--- 386

Query: 1302 SSLASITVLKPFYYLVQQTIHWLF----MGYSMTAFCLFTWDKWFKVYKSIYFLGHVFFL 1469
                    L P        +HW        Y    F L +     + + SIYF  H   L
Sbjct: 387  --------LSPGGQKAWDWVHWFLKMRAYDYMCMGFVLLSLADTLRYWASIYFCIHFLAL 438

Query: 1470 SLL 1478
            + L
Sbjct: 439  AAL 441


>ref|NP_001139528.1| lysophospholipid acyltransferase 7 isoform 2 [Homo sapiens].
          Length = 399

 Score = 57.8 bits (138), Expect = 3e-08
 Identities = 74/315 (23%), Positives = 114/315 (36%), Gaps = 29/315 (9%)
 Frame = +3

Query: 621  VPSLLEVAGFSYFYGAFLVGPQFSMNHYMKLVQGQLTDIPGKIPNSTIPALKRL-SLGLF 797
            VPSL+E   +SY Y   + GP F    Y+  ++      PG +P S  P L+R     LF
Sbjct: 73   VPSLMETLSYSYCYVGIMTGPFFRYRTYLDWLE---QPFPGAVP-SLRPLLRRAWPAPLF 128

Query: 798  YLVGYTLLSPHITE-DYLLTDDYENLHFVFRCMYML-VWGKFVLYKYVTCWLVTEGVCIL 971
             L+   LLS H+   + +  D +       R  YM+ V+  F +  YV  W+  E  CI 
Sbjct: 129  GLL--FLLSSHLFPLEAVREDAFYARPLPARLFYMIPVFFAFRMRFYVA-WIAAECGCIA 185

Query: 972  TGLGFNDFDEHGKA----------------------KWDACANMKVWLFETNPRFTGTIA 1085
             G G        +A                       ++   N+  +  +   R    + 
Sbjct: 186  AGFGAYPVAAKARAGGGPTLQCPPPSSPEKAASLEYDYETIRNIDCYSTDFCVRVRDGMR 245

Query: 1086 SFNINTNAWVARYFFKRLKFLGNKVXXXXXXXXXXXXWHGLHSGYLVCFQMEFLIVIVER 1265
             +N+    W+A+Y +K      + V            WHGLH GY + F    L +  E 
Sbjct: 246  YWNMTVQWWLAQYIYKSAP-ARSYVLRSAWTMLLSAYWHGLHPGYYLSFLTIPLCLAAEG 304

Query: 1266 QAASLIQDSPTLSSLASITVLKPFYYLVQQTIHWLF----MGYSMTAFCLFTWDKWFKVY 1433
            +  S ++             L P        +HW        Y    F L +     + +
Sbjct: 305  RLESALRGR-----------LSPGGQKAWDWVHWFLKMRAYDYMCMGFVLLSLADTLRYW 353

Query: 1434 KSIYFLGHVFFLSLL 1478
             SIYF  H   L+ L
Sbjct: 354  ASIYFCIHFLALAAL 368


>ref|NP_001139555.1| lysophospholipid acyltransferase 7 isoform 2 [Homo sapiens].
          Length = 399

 Score = 57.8 bits (138), Expect = 3e-08
 Identities = 74/315 (23%), Positives = 114/315 (36%), Gaps = 29/315 (9%)
 Frame = +3

Query: 621  VPSLLEVAGFSYFYGAFLVGPQFSMNHYMKLVQGQLTDIPGKIPNSTIPALKRL-SLGLF 797
            VPSL+E   +SY Y   + GP F    Y+  ++      PG +P S  P L+R     LF
Sbjct: 73   VPSLMETLSYSYCYVGIMTGPFFRYRTYLDWLE---QPFPGAVP-SLRPLLRRAWPAPLF 128

Query: 798  YLVGYTLLSPHITE-DYLLTDDYENLHFVFRCMYML-VWGKFVLYKYVTCWLVTEGVCIL 971
             L+   LLS H+   + +  D +       R  YM+ V+  F +  YV  W+  E  CI 
Sbjct: 129  GLL--FLLSSHLFPLEAVREDAFYARPLPARLFYMIPVFFAFRMRFYVA-WIAAECGCIA 185

Query: 972  TGLGFNDFDEHGKA----------------------KWDACANMKVWLFETNPRFTGTIA 1085
             G G        +A                       ++   N+  +  +   R    + 
Sbjct: 186  AGFGAYPVAAKARAGGGPTLQCPPPSSPEKAASLEYDYETIRNIDCYSTDFCVRVRDGMR 245

Query: 1086 SFNINTNAWVARYFFKRLKFLGNKVXXXXXXXXXXXXWHGLHSGYLVCFQMEFLIVIVER 1265
             +N+    W+A+Y +K      + V            WHGLH GY + F    L +  E 
Sbjct: 246  YWNMTVQWWLAQYIYKSAP-ARSYVLRSAWTMLLSAYWHGLHPGYYLSFLTIPLCLAAEG 304

Query: 1266 QAASLIQDSPTLSSLASITVLKPFYYLVQQTIHWLF----MGYSMTAFCLFTWDKWFKVY 1433
            +  S ++             L P        +HW        Y    F L +     + +
Sbjct: 305  RLESALRGR-----------LSPGGQKAWDWVHWFLKMRAYDYMCMGFVLLSLADTLRYW 353

Query: 1434 KSIYFLGHVFFLSLL 1478
             SIYF  H   L+ L
Sbjct: 354  ASIYFCIHFLALAAL 368


>ref|NP_982300.1| probable protein-cysteine N-palmitoyltransferase porcupine isoform C
            [Homo sapiens].
          Length = 455

 Score = 51.2 bits (121), Expect = 3e-06
 Identities = 44/192 (22%), Positives = 80/192 (41%), Gaps = 2/192 (1%)
 Frame = +3

Query: 582  SLSSEQQKYAIRGVPSLLEVAGFSYFYGAFLVGPQFSMNHYMKLVQGQLTDIPGKIPNST 761
            SL  +  +  +  VPS +E  G+ YF G  + GP  S + Y++ VQG+            
Sbjct: 136  SLGFDLDRGEVGTVPSPVEFMGYLYFVGTIVFGPWISFHSYLQAVQGRPLSC-----RWL 190

Query: 762  IPALKRLSLGLFYLVGYTLLSPHITEDYLLTDDYENLHFVFRCMYMLVWGKFVLYKYVTC 941
                + L+L L  LV  T + P++   ++  +    L       ++  +   V + +   
Sbjct: 191  QKVARSLALALLCLVLSTCVGPYLFPYFIPLNGDRLLRKGTMVRWLRAYESAVSFHFSNY 250

Query: 942  WL--VTEGVCILTGLGFNDFDEHGKAKWDACANMKVWLFETNPRFTGTIASFNINTNAWV 1115
            ++  ++E    L G GF +  +H   +WD   + K    E        + S+N+  + W+
Sbjct: 251  FVGFLSEATATLAGAGFTEEKDH--LEWDLTVS-KPLNVELPRSMVEVVTSWNLPMSYWL 307

Query: 1116 ARYFFKRLKFLG 1151
              Y FK    LG
Sbjct: 308  NNYVFKNALRLG 319


>ref|NP_073736.2| probable protein-cysteine N-palmitoyltransferase porcupine isoform A
            [Homo sapiens].
          Length = 450

 Score = 51.2 bits (121), Expect = 3e-06
 Identities = 48/190 (25%), Positives = 77/190 (40%)
 Frame = +3

Query: 582  SLSSEQQKYAIRGVPSLLEVAGFSYFYGAFLVGPQFSMNHYMKLVQGQLTDIPGKIPNST 761
            SL  +  +  +  VPS +E  G+ YF G  + GP  S + Y++ VQG+            
Sbjct: 136  SLGFDLDRGEVGTVPSPVEFMGYLYFVGTIVFGPWISFHSYLQAVQGRPLSC-----RWL 190

Query: 762  IPALKRLSLGLFYLVGYTLLSPHITEDYLLTDDYENLHFVFRCMYMLVWGKFVLYKYVTC 941
                + L+L L  LV  T + P++   ++  +    L    R     V   F    Y   
Sbjct: 191  QKVARSLALALLCLVLSTCVGPYLFPYFIPLNGDRLLRKWLRAYESAV--SFHFSNYFVG 248

Query: 942  WLVTEGVCILTGLGFNDFDEHGKAKWDACANMKVWLFETNPRFTGTIASFNINTNAWVAR 1121
            +L +E    L G GF +  +H   +WD   + K    E        + S+N+  + W+  
Sbjct: 249  FL-SEATATLAGAGFTEEKDH--LEWDLTVS-KPLNVELPRSMVEVVTSWNLPMSYWLNN 304

Query: 1122 YFFKRLKFLG 1151
            Y FK    LG
Sbjct: 305  YVFKNALRLG 314


>ref|NP_982299.1| probable protein-cysteine N-palmitoyltransferase porcupine isoform B
            [Homo sapiens].
          Length = 456

 Score = 50.4 bits (119), Expect = 5e-06
 Identities = 45/193 (23%), Positives = 82/193 (42%), Gaps = 3/193 (1%)
 Frame = +3

Query: 582  SLSSEQQKYAIRGVPSLLEVAGFSYFYGAFLVGPQFSMNHYMKLVQGQLTDIPGKIPNST 761
            SL  +  +  +  VPS +E  G+ YF G  + GP  S + Y++ VQG+            
Sbjct: 136  SLGFDLDRGEVGTVPSPVEFMGYLYFVGTIVFGPWISFHSYLQAVQGRPLSC-----RWL 190

Query: 762  IPALKRLSLGLFYLVGYTLLSPHITEDYL-LTDDYENLHFVFRCMYMLVWGKFVLYKYVT 938
                + L+L L  LV  T + P++   ++ L  D    +   +  ++  +   V + +  
Sbjct: 191  QKVARSLALALLCLVLSTCVGPYLFPYFIPLNGDRLLRNKKRKARWLRAYESAVSFHFSN 250

Query: 939  CWL--VTEGVCILTGLGFNDFDEHGKAKWDACANMKVWLFETNPRFTGTIASFNINTNAW 1112
             ++  ++E    L G GF +  +H   +WD   + K    E        + S+N+  + W
Sbjct: 251  YFVGFLSEATATLAGAGFTEEKDH--LEWDLTVS-KPLNVELPRSMVEVVTSWNLPMSYW 307

Query: 1113 VARYFFKRLKFLG 1151
            +  Y FK    LG
Sbjct: 308  LNNYVFKNALRLG 320


  Database: RefSeq49_HP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 18,297,164
  Number of sequences in database:  32,964
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 32964
Number of Hits to DB: 74,357,030
Number of extensions: 2169127
Number of successful extensions: 8919
Number of sequences better than 1.0e-05: 9
Number of HSP's gapped: 8883
Number of HSP's successfully gapped: 9
Length of query: 598
Length of database: 18,297,164
Length adjustment: 108
Effective length of query: 490
Effective length of database: 14,737,052
Effective search space: 7221155480
Effective search space used: 7221155480
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)

Search to Sscrofa10_2

BLASTN 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-013099
         (1795 letters)

Database: Sscrofa_10.2.fasta 
           4582 sequences; 2,808,509,378 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Sscrofa_Chr05                                                         462   e-127

>Sscrofa_Chr05 
||          Length = 111506441

 Score =  462 bits (233), Expect = e-127
 Identities = 233/233 (100%)
 Strand = Plus / Plus

                                                                            
Query: 1        ttgggggtgaagctccagcgttgtgcccacattcggggcgcgcggagccgaggggtccct 60
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 66143938 ttgggggtgaagctccagcgttgtgcccacattcggggcgcgcggagccgaggggtccct 66143997

                                                                            
Query: 61       ggggggcgcccggagctaagatggcgtccgcagccgagggggacgtgggagcggtggtgg 120
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 66143998 ggggggcgcccggagctaagatggcgtccgcagccgagggggacgtgggagcggtggtgg 66144057

                                                                            
Query: 121      agctggcaggagtgctgcggtgggttctccaggagctgagccttaacaagttggcgacgt 180
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 66144058 agctggcaggagtgctgcggtgggttctccaggagctgagccttaacaagttggcgacgt 66144117

                                                                     
Query: 181      ccctgggcgcgtcagaacaggcgctgcggctcatcctctccatcttcctaggt 233
                |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 66144118 ccctgggcgcgtcagaacaggcgctgcggctcatcctctccatcttcctaggt 66144170



 Score =  359 bits (181), Expect = 3e-96
 Identities = 181/181 (100%)
 Strand = Plus / Plus

                                                                            
Query: 577      agaaatccttgtcctctgagcaacagaaatatgccatacggggtgtcccttccctgctgg 636
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 66178139 agaaatccttgtcctctgagcaacagaaatatgccatacggggtgtcccttccctgctgg 66178198

                                                                            
Query: 637      aagttgctggtttctcctacttctatggggccttcttggtggggccccagttctcaatga 696
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 66178199 aagttgctggtttctcctacttctatggggccttcttggtggggccccagttctcaatga 66178258

                                                                            
Query: 697      accactacatgaagctggtgcagggacagctgactgacataccagggaagataccaaaca 756
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 66178259 accactacatgaagctggtgcagggacagctgactgacataccagggaagataccaaaca 66178318

                 
Query: 757      g 757
                |
Sbjct: 66178319 g 66178319



 Score =  351 bits (177), Expect = 8e-94
 Identities = 230/240 (95%), Gaps = 7/240 (2%)
 Strand = Plus / Plus

                                                                            
Query: 1556     ggtggcctagagcaggactggtgcagaaatgactcgcctcccttccacagcactccttcg 1615
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 66181847 ggtggcctagagcaggactggtgcagaaatgactcgcctcccttccacagcactccttcg 66181906

                                                                            
Query: 1616     cccccagaacacagagcacagaagccagggagcaggagaacagggctccccagctctgcc 1675
                |||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 66181907 cccc-agaacacagagcacagaagccagggagcaggagaacagggctccccagctgtgcc 66181965

                                                                            
Query: 1676     tctgctgccagccgcatctccatttggggccaaaggggaaaactctcgtggggaggagta 1735
                |||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||
Sbjct: 66181966 tctgctgccagccgcatctccatttggggccaaagggg-aaactctcgt-gggaggagta 66182023

                                                                            
Query: 1736     gagggggccacgtcctcccctctggggcttcccccatgcacgttgcctttatctctcccc 1795
                |||||| |||||| ||||||||||||   |||||||||||||||||| ||||||||||||
Sbjct: 66182024 gaggggcccacgt-ctcccctctggg--ctcccccatgcacgttgcc-ttatctctcccc 66182079



 Score =  333 bits (168), Expect = 2e-88
 Identities = 168/168 (100%)
 Strand = Plus / Plus

                                                                            
Query: 953      ggaaggggtgtgcattctgacgggcctgggcttcaatgactttgacgaacatggaaaggc 1012
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 66179910 ggaaggggtgtgcattctgacgggcctgggcttcaatgactttgacgaacatggaaaggc 66179969

                                                                            
Query: 1013     caagtgggatgcttgcgccaacatgaaggtgtggctctttgaaacaaacccccgcttcac 1072
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 66179970 caagtgggatgcttgcgccaacatgaaggtgtggctctttgaaacaaacccccgcttcac 66180029

                                                                
Query: 1073     tggtaccatcgcctctttcaacatcaacaccaacgcctgggtggctcg 1120
                ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 66180030 tggtaccatcgcctctttcaacatcaacaccaacgcctgggtggctcg 66180077



 Score =  325 bits (164), Expect = 5e-86
 Identities = 164/164 (100%)
 Strand = Plus / Plus

                                                                            
Query: 1266     caggctgccagcctgattcaagacagcccaaccctgagcagcctggcttccattactgtc 1325
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 66181247 caggctgccagcctgattcaagacagcccaaccctgagcagcctggcttccattactgtc 66181306

                                                                            
Query: 1326     ctgaaacctttctactacctggtgcagcagaccatccactggctcttcatgggttattcc 1385
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 66181307 ctgaaacctttctactacctggtgcagcagaccatccactggctcttcatgggttattcc 66181366

                                                            
Query: 1386     atgactgccttctgcctcttcacgtgggacaaatggtttaaggt 1429
                ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 66181367 atgactgccttctgcctcttcacgtgggacaaatggtttaaggt 66181410



 Score =  289 bits (146), Expect = 3e-75
 Identities = 149/150 (99%)
 Strand = Plus / Plus

                                                                            
Query: 1120     gttacttcttcaaacgactcaagttccttggaaataaagtactatcccagggtctctctt 1179
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 66181020 gttacttcttcaaacgactcaagttccttggaaataaagtactatcccagggtctctctt 66181079

                                                                            
Query: 1180     tgctgttcctggccctctggcatggcctccactcaggttacttggtctgcttccagatgg 1239
                ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 66181080 tgctgttcctggccctctggcatggcctccactcaggttacctggtctgcttccagatgg 66181139

                                              
Query: 1240     aattcctcattgttattgtggaaagacagg 1269
                ||||||||||||||||||||||||||||||
Sbjct: 66181140 aattcctcattgttattgtggaaagacagg 66181169



 Score =  266 bits (134), Expect = 4e-68
 Identities = 134/134 (100%)
 Strand = Plus / Plus

                                                                            
Query: 1426     aggtgtataaatccatctattttcttggccacgtcttcttcttgagtctactgttcacat 1485
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 66181512 aggtgtataaatccatctattttcttggccacgtcttcttcttgagtctactgttcacat 66181571

                                                                            
Query: 1486     tgccttatgttcgaaaagcaatggtgccgaggaaagagaagttaaagaaaatggaataat 1545
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 66181572 tgccttatgttcgaaaagcaatggtgccgaggaaagagaagttaaagaaaatggaataat 66181631

                              
Query: 1546     ctatttccctggtg 1559
                ||||||||||||||
Sbjct: 66181632 ctatttccctggtg 66181645



 Score =  222 bits (112), Expect = 5e-55
 Identities = 112/112 (100%)
 Strand = Plus / Plus

                                                                            
Query: 755      cagcaccatacctgctctcaagcgcctgagtctgggccttttctacctagtgggctacac 814
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 66179037 cagcaccatacctgctctcaagcgcctgagtctgggccttttctacctagtgggctacac 66179096

                                                                    
Query: 815      cctgctcagcccccacatcacagaagactatctcctcactgacgactatgaa 866
                ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 66179097 cctgctcagcccccacatcacagaagactatctcctcactgacgactatgaa 66179148



 Score =  220 bits (111), Expect = 2e-54
 Identities = 111/111 (100%)
 Strand = Plus / Plus

                                                                            
Query: 230      aggttaccccttggctttgttttatcggcgttaccttttctacaaggaaagctacctcat 289
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 66175891 aggttaccccttggctttgttttatcggcgttaccttttctacaaggaaagctacctcat 66175950

                                                                   
Query: 290      ccacctcttccacacctttaccggcctctcaattgcttattataactttgg 340
                |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 66175951 ccacctcttccacacctttaccggcctctcaattgcttattataactttgg 66176001



 Score =  208 bits (105), Expect = 8e-51
 Identities = 108/109 (99%)
 Strand = Plus / Plus

                                                                            
Query: 339      ggaacccagctctaccactccgtgctgtgcattgtgcttcagtttcttatcctccggctg 398
                ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 66176524 ggaacccagctctaccactccgtgctgtgcattgtgcttcagtttctcatcctccggctg 66176583

                                                                 
Query: 399      atgggccgcaccatcactgccgtcctcactaccttttgcttccagatgg 447
                |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 66176584 atgggccgcaccatcactgccgtcctcactaccttttgcttccagatgg 66176632



 Score =  192 bits (97), Expect = 5e-46
 Identities = 97/97 (100%)
 Strand = Plus / Plus

                                                                            
Query: 446      ggcctaccttcttgccggatattattacacagccactggcaactacgatatcaagtggac 505
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 66177450 ggcctaccttcttgccggatattattacacagccactggcaactacgatatcaagtggac 66177509

                                                     
Query: 506      gatgccacattgtgtcctgaccttgaagctgatcggt 542
                |||||||||||||||||||||||||||||||||||||
Sbjct: 66177510 gatgccacattgtgtcctgaccttgaagctgatcggt 66177546



 Score =  167 bits (84), Expect = 3e-38
 Identities = 87/88 (98%)
 Strand = Plus / Plus

                                                                            
Query: 867      aatctccacttcgtgttccgctgcatgtacatgctggtctggggcaagtttgtgctatac 926
                |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 66179728 aatctccacttcatgttccgctgcatgtacatgctggtctggggcaagtttgtgctatac 66179787

                                            
Query: 927      aagtacgtcacctgttggctcgtcacgg 954
                ||||||||||||||||||||||||||||
Sbjct: 66179788 aagtacgtcacctgttggctcgtcacgg 66179815



 Score = 77.8 bits (39), Expect = 2e-11
 Identities = 39/39 (100%)
 Strand = Plus / Plus

                                                       
Query: 540      ggtctggccatggactactttgacggagggaaagatcag 578
                |||||||||||||||||||||||||||||||||||||||
Sbjct: 66177706 ggtctggccatggactactttgacggagggaaagatcag 66177744


  Database: Sscrofa_10.2.fasta
    Posted date:  Nov 16, 2011 10:34 AM
  Number of letters in database: 2,808,509,378
  Number of sequences in database:  4582
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4582
Number of Hits to DB: 52,092,260
Number of extensions: 836
Number of successful extensions: 836
Number of sequences better than 1.0e-05: 1
Number of HSP's gapped: 833
Number of HSP's successfully gapped: 13
Length of query: 1795
Length of database: 2,808,509,378
Length adjustment: 22
Effective length of query: 1773
Effective length of database: 2,808,408,574
Effective search space: 4979308401702
Effective search space used: 4979308401702
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 18 (36.2 bits)
S2: 30 (60.0 bits)