Search to RefSeqCP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-013215
(1154 letters)
Database: RefSeq49_CP.fasta
33,336 sequences; 18,874,504 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_541780.2| PREDICTED: similar to calcium/calmodulin-depend... 414 e-129
Alignment gi|XP_849488.1| PREDICTED: similar to calcium/calmodulin-depend... 340 e-110
Alignment gi|XP_547392.2| PREDICTED: similar to calcium/calmodulin-depend... 360 e-110
Alignment gi|XP_549361.2| PREDICTED: similar to Calcium/calmodulin-depend... 298 1e-90
Alignment gi|XP_850476.1| PREDICTED: similar to CaM kinase-like vesicle-a... 232 1e-67
Alignment gi|XP_861610.1| PREDICTED: similar to CaM kinase-like vesicle-a... 232 1e-67
Alignment gi|XP_544162.2| PREDICTED: similar to protein serine kinase H2 ... 229 3e-60
Alignment gi|XP_858119.1| PREDICTED: similar to Serine/threonine-protein ... 222 8e-60
Alignment gi|XP_858159.1| PREDICTED: similar to Serine/threonine-protein ... 222 8e-60
Alignment gi|XP_858077.1| PREDICTED: similar to Serine/threonine-protein ... 222 8e-60
>ref|XP_541780.2| PREDICTED: similar to calcium/calmodulin-dependent protein kinase I
[Canis familiaris].
Length = 370
Score = 414 bits (1063), Expect(2) = e-129
Identities = 204/235 (86%), Positives = 217/235 (92%)
Frame = +1
Query: 346 GAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHENIVALEDIYESP 525
GAFSEV+LAE+K T KL A+KCI KKAL+GKE S+ENEIAVL KIKH NIVAL+DIYES
Sbjct: 29 GAFSEVILAEDKRTHKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDIYESG 88
Query: 526 NHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLDAVYYLHRMGIVHRDLKPENLL 705
HLYL+MQLVSGGELFDRIVEKGFYTE+DAS LI QVLDAV YLH +GIVHRDLKPENLL
Sbjct: 89 GHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLL 148
Query: 706 YYSQDEESKIMISDFGLSKMEGKGDVMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIA 885
YYS DE+SKIMISDFGLSKME G V+STACGTPGYVAPEVLAQKPYSKAVDCWSIGVIA
Sbjct: 149 YYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIA 208
Query: 886 YILLCGYPPFYDENDSKLFEQILKAEYEFDSPYWDDISDSAKDFIRNLMEKDPIK 1050
YILLCGYPPFYDEND+KLFEQILKAEYEFDSPYWDDISDSAKDFIR+LMEKDP K
Sbjct: 209 YILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEK 263
Score = 67.8 bits (164), Expect(2) = e-129
Identities = 29/38 (76%), Positives = 34/38 (89%)
Frame = +3
Query: 1041 PNKRYTCEQAARHPWIAGDTALSKNINESVSAQIRKNF 1154
P KR+TCEQA +HPWIAGDTAL KNI++SVS QI+KNF
Sbjct: 261 PEKRFTCEQALQHPWIAGDTALDKNIHQSVSEQIKKNF 298
>ref|XP_849488.1| PREDICTED: similar to calcium/calmodulin-dependent protein kinase ID
isoform 2 [Canis familiaris].
Length = 412
Score = 340 bits (872), Expect(2) = e-110
Identities = 165/166 (99%), Positives = 165/166 (99%)
Frame = +1
Query: 553 VSGGELFDRIVEKGFYTEKDASTLIRQVLDAVYYLHRMGIVHRDLKPENLLYYSQDEESK 732
VSGGELFDRIVEKGFYTEKDASTLIRQVLDAVYYLHRMGIVHRDLKPENLLYYSQDEESK
Sbjct: 128 VSGGELFDRIVEKGFYTEKDASTLIRQVLDAVYYLHRMGIVHRDLKPENLLYYSQDEESK 187
Query: 733 IMISDFGLSKMEGKGDVMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPP 912
IMISDFGLSKMEGKGDVMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPP
Sbjct: 188 IMISDFGLSKMEGKGDVMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPP 247
Query: 913 FYDENDSKLFEQILKAEYEFDSPYWDDISDSAKDFIRNLMEKDPIK 1050
FYDENDSKLFEQILKAEYEFDSPYWDDISDSAKDFIRNLMEKDP K
Sbjct: 248 FYDENDSKLFEQILKAEYEFDSPYWDDISDSAKDFIRNLMEKDPNK 293
Score = 79.7 bits (195), Expect(2) = e-110
Identities = 36/38 (94%), Positives = 38/38 (100%)
Frame = +3
Query: 1041 PNKRYTCEQAARHPWIAGDTALSKNINESVSAQIRKNF 1154
PNKRYTCEQAARHPWIAGDTAL+KNI+ESVSAQIRKNF
Sbjct: 291 PNKRYTCEQAARHPWIAGDTALNKNIHESVSAQIRKNF 328
>ref|XP_547392.2| PREDICTED: similar to calcium/calmodulin-dependent protein kinase IG
[Canis familiaris].
Length = 509
Score = 360 bits (923), Expect(2) = e-110
Identities = 179/233 (76%), Positives = 204/233 (87%)
Frame = +1
Query: 346 GAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHENIVALEDIYESP 525
GAFSEV L +++ TGKLFA+KCI KK+ ++SS+ENEIAVL+KIKHENIV LEDIYES
Sbjct: 65 GAFSEVFLVKQRVTGKLFALKCI-KKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYEST 123
Query: 526 NHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLDAVYYLHRMGIVHRDLKPENLL 705
H YLVMQLVSGGELFDRI+E+G YTEKDAS +I+QVL AV YLH GIVHRDLKPENLL
Sbjct: 124 THYYLVMQLVSGGELFDRILERGVYTEKDASLVIQQVLSAVKYLHENGIVHRDLKPENLL 183
Query: 706 YYSQDEESKIMISDFGLSKMEGKGDVMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIA 885
Y + +E SKIMI+DFGLSKME G VMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVI
Sbjct: 184 YLTPEENSKIMITDFGLSKMEQSG-VMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIT 242
Query: 886 YILLCGYPPFYDENDSKLFEQILKAEYEFDSPYWDDISDSAKDFIRNLMEKDP 1044
YILLCGYPPFY+E +SKLFE+I + YEF+SP+WDDIS+SAKDFI +L+EKDP
Sbjct: 243 YILLCGYPPFYEETESKLFEKIKEGYYEFESPFWDDISESAKDFICHLLEKDP 295
Score = 59.7 bits (143), Expect(2) = e-110
Identities = 26/38 (68%), Positives = 32/38 (84%)
Frame = +3
Query: 1041 PNKRYTCEQAARHPWIAGDTALSKNINESVSAQIRKNF 1154
PN+RYTCE+A RHPWI G+TAL ++I SVS QI+KNF
Sbjct: 295 PNERYTCEKALRHPWIDGNTALHRDIYPSVSLQIQKNF 332
>ref|XP_549361.2| PREDICTED: similar to Calcium/calmodulin-dependent protein kinase
type 1B (CaM kinase IB) (CaM kinase I beta) (CaMKI-beta)
(CaM-KI beta) (Pregnancy up-regulated non-ubiquitously
expressed CaM kinase homolog) [Canis familiaris].
Length = 278
Score = 298 bits (764), Expect(2) = 1e-90
Identities = 139/192 (72%), Positives = 170/192 (88%)
Frame = +1
Query: 475 KIKHENIVALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLDAVYY 654
++ H NIVALED++ESP+HLYL M+LV+GGELFDRI+E+G YTEKDAS L+ QVL AV Y
Sbjct: 2 RVSHPNIVALEDVHESPSHLYLAMELVTGGELFDRIMERGSYTEKDASHLVGQVLGAVSY 61
Query: 655 LHRMGIVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGDVMSTACGTPGYVAPEVLA 834
LH +GIVHRDLKPENLLY + E+SKIM+SDFGLSK++ G+++ TACGTPGYVAPE+L
Sbjct: 62 LHSLGIVHRDLKPENLLYATPFEDSKIMVSDFGLSKIQA-GNMLGTACGTPGYVAPELLE 120
Query: 835 QKPYSKAVDCWSIGVIAYILLCGYPPFYDENDSKLFEQILKAEYEFDSPYWDDISDSAKD 1014
QKPY KAVD W++GVI+YILLCGYPPFYDE+D +LF QIL+A YEFDSP+WDDIS+SAKD
Sbjct: 121 QKPYGKAVDVWALGVISYILLCGYPPFYDESDPELFSQILRASYEFDSPFWDDISESAKD 180
Query: 1015 FIRNLMEKDPIK 1050
FIR+L+E+DP K
Sbjct: 181 FIRHLLERDPQK 192
Score = 54.3 bits (129), Expect(2) = 1e-90
Identities = 24/38 (63%), Positives = 30/38 (78%)
Frame = +3
Query: 1041 PNKRYTCEQAARHPWIAGDTALSKNINESVSAQIRKNF 1154
P KR+TC+QA +H WI+GD AL K+I SVS QI+KNF
Sbjct: 190 PQKRFTCQQALQHLWISGDAALDKDILGSVSEQIQKNF 227
>ref|XP_850476.1| PREDICTED: similar to CaM kinase-like vesicle-associated isoform 2
[Canis familiaris].
Length = 507
Score = 232 bits (592), Expect(2) = 1e-67
Identities = 112/236 (47%), Positives = 164/236 (69%), Gaps = 8/236 (3%)
Frame = +1
Query: 352 FSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHENIVALEDIYESPNH 531
F E+ A++K TGKL K K+ + + +NEI +L+ +KH NI+ L D++ +
Sbjct: 35 FCEIFRAKDKTTGKLHTCKKFQKRDGRKVRKAAKNEIGILKMVKHPNILQLVDVFVTRKE 94
Query: 532 LYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLDAVYYLHRMGIVHRDLKPENLLYY 711
++ ++L +G E+FD I+++G+Y+E+D S ++RQVL+AV YLH + IVHR+LK ENL+YY
Sbjct: 95 YFIFLELATGREVFDWILDQGYYSERDTSNVVRQVLEAVAYLHSLKIVHRNLKLENLVYY 154
Query: 712 SQDEESKIMISDFGLSKMEGKGDVMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYI 891
++ + SKI+ISDF L+K+E ++ CGTP Y+APEV+ ++ Y + VDCW+IGVI YI
Sbjct: 155 NRLKNSKIVISDFHLAKLE--NGLIKEPCGTPEYLAPEVVGRQRYGRPVDCWAIGVIMYI 212
Query: 892 LLCGYPPFYDE--------NDSKLFEQILKAEYEFDSPYWDDISDSAKDFIRNLME 1035
LL G PPFY+E +D LF +IL +YEFDSPYWDDIS +AKD + LME
Sbjct: 213 LLSGNPPFYEEVEEDDYENHDKNLFRKILAGDYEFDSPYWDDISQAAKDLVTRLME 268
Score = 43.9 bits (102), Expect(2) = 1e-67
Identities = 19/37 (51%), Positives = 25/37 (67%)
Frame = +3
Query: 1044 NKRYTCEQAARHPWIAGDTALSKNINESVSAQIRKNF 1154
++R T E+A H WI+G+ A KNI + V AQI KNF
Sbjct: 272 DQRITAEEAISHEWISGNAASDKNIKDGVCAQIEKNF 308
>ref|XP_861610.1| PREDICTED: similar to CaM kinase-like vesicle-associated isoform 6
[Canis familiaris].
Length = 470
Score = 232 bits (592), Expect(2) = 1e-67
Identities = 112/236 (47%), Positives = 164/236 (69%), Gaps = 8/236 (3%)
Frame = +1
Query: 352 FSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHENIVALEDIYESPNH 531
F E+ A++K TGKL K K+ + + +NEI +L+ +KH NI+ L D++ +
Sbjct: 35 FCEIFRAKDKTTGKLHTCKKFQKRDGRKVRKAAKNEIGILKMVKHPNILQLVDVFVTRKE 94
Query: 532 LYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLDAVYYLHRMGIVHRDLKPENLLYY 711
++ ++L +G E+FD I+++G+Y+E+D S ++RQVL+AV YLH + IVHR+LK ENL+YY
Sbjct: 95 YFIFLELATGREVFDWILDQGYYSERDTSNVVRQVLEAVAYLHSLKIVHRNLKLENLVYY 154
Query: 712 SQDEESKIMISDFGLSKMEGKGDVMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYI 891
++ + SKI+ISDF L+K+E ++ CGTP Y+APEV+ ++ Y + VDCW+IGVI YI
Sbjct: 155 NRLKNSKIVISDFHLAKLE--NGLIKEPCGTPEYLAPEVVGRQRYGRPVDCWAIGVIMYI 212
Query: 892 LLCGYPPFYDE--------NDSKLFEQILKAEYEFDSPYWDDISDSAKDFIRNLME 1035
LL G PPFY+E +D LF +IL +YEFDSPYWDDIS +AKD + LME
Sbjct: 213 LLSGNPPFYEEVEEDDYENHDKNLFRKILAGDYEFDSPYWDDISQAAKDLVTRLME 268
Score = 43.9 bits (102), Expect(2) = 1e-67
Identities = 19/37 (51%), Positives = 25/37 (67%)
Frame = +3
Query: 1044 NKRYTCEQAARHPWIAGDTALSKNINESVSAQIRKNF 1154
++R T E+A H WI+G+ A KNI + V AQI KNF
Sbjct: 272 DQRITAEEAISHEWISGNAASDKNIKDGVCAQIEKNF 308
>ref|XP_544162.2| PREDICTED: similar to protein serine kinase H2 [Canis familiaris].
Length = 383
Score = 229 bits (585), Expect = 3e-60
Identities = 112/231 (48%), Positives = 163/231 (70%), Gaps = 2/231 (0%)
Frame = +1
Query: 346 GAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHENIVALEDIYESP 525
G FS+VV E+K T K FA+K + + +G+E+ ++E+ +LR++ H+ IV L +I+E+
Sbjct: 70 GNFSKVVRVEQKTTKKPFAIKVVETRVREGREAC-DSELTILRRVSHQYIVQLVEIFEAQ 128
Query: 526 NHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLDAVYYLHRMGIVHRDLKPENLL 705
+ +Y+VM+L +GGELFDR++ +G +TE DA +++ V D + YLH + I HRDLKPENLL
Sbjct: 129 DRVYMVMELATGGELFDRLMTQGSFTEHDAVRILQMVADGIRYLHALRITHRDLKPENLL 188
Query: 706 YYSQDEESKIMISDFGLSKMEGK-GD-VMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGV 879
YY ESKI+I+DFGL+ K GD M T CGTP YVAPE+L ++PY+ AVD W++GV
Sbjct: 189 YYHPGAESKILITDFGLAHSGNKSGDWTMRTLCGTPEYVAPEILLRRPYTSAVDMWALGV 248
Query: 880 IAYILLCGYPPFYDENDSKLFEQILKAEYEFDSPYWDDISDSAKDFIRNLM 1032
I Y+LL G PF DE+ ++L+ +ILK +Y + W +IS AKDFI L+
Sbjct: 249 ITYVLLSGVLPFDDESHTRLYRKILKGKYNYTGEPWPNISHLAKDFIDKLL 299
>ref|XP_858119.1| PREDICTED: similar to Serine/threonine-protein kinase DCAMKL1
(Doublecortin-like and CAM kinase-like 1) isoform 6
[Canis familiaris].
Length = 750
Score = 222 bits (565), Expect(2) = 8e-60
Identities = 111/235 (47%), Positives = 154/235 (65%), Gaps = 3/235 (1%)
Frame = +1
Query: 346 GAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHENIVALEDIYESP 525
G F+ V E++T + +A+K I K +GKE I+NE+++LR++KH NIV L + + P
Sbjct: 409 GNFAVVKECVERSTAREYALKIIKKSKCRGKEHMIQNEVSILRRVKHPNIVLLIEEMDVP 468
Query: 526 NHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLDAVYYLHRMGIVHRDLKPENLL 705
LYLVM+LV GG+LFD I YTE+DAS ++ + A+ YLH + IVHRD+KPENLL
Sbjct: 469 TELYLVMELVKGGDLFDAITSTNKYTERDASGMLYNLASAIKYLHSLNIVHRDIKPENLL 528
Query: 706 YYS-QDEESKIMISDFGLSKMEGKGDVMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVI 882
Y QD + + DFGL+ + + T CGTP YVAPE++A+ Y VD W+ GVI
Sbjct: 529 VYEHQDGSKSLKLGDFGLATI--VDGPLYTVCGTPTYVAPEIIAETGYGLKVDIWAAGVI 586
Query: 883 AYILLCGYPPFYDENDSK--LFEQILKAEYEFDSPYWDDISDSAKDFIRNLMEKD 1041
YILLCG+PPF D + LF+QIL + +F SPYWD++SDSAK+ I ++ D
Sbjct: 587 TYILLCGFPPFRGSGDDQEVLFDQILMGQVDFPSPYWDNVSDSAKELITMMLLVD 641
Score = 28.1 bits (61), Expect(2) = 8e-60
Identities = 11/37 (29%), Positives = 20/37 (54%)
Frame = +3
Query: 1044 NKRYTCEQAARHPWIAGDTALSKNINESVSAQIRKNF 1154
++R++ Q HPW+ D SV+ +I+K+F
Sbjct: 643 DQRFSAVQVLEHPWVNDDGLPENEHQLSVAGKIKKHF 679
>ref|XP_858159.1| PREDICTED: similar to Serine/threonine-protein kinase DCAMKL1
(Doublecortin-like and CAM kinase-like 1) isoform 7
[Canis familiaris].
Length = 741
Score = 222 bits (565), Expect(2) = 8e-60
Identities = 111/235 (47%), Positives = 154/235 (65%), Gaps = 3/235 (1%)
Frame = +1
Query: 346 GAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHENIVALEDIYESP 525
G F+ V E++T + +A+K I K +GKE I+NE+++LR++KH NIV L + + P
Sbjct: 400 GNFAVVKECVERSTAREYALKIIKKSKCRGKEHMIQNEVSILRRVKHPNIVLLIEEMDVP 459
Query: 526 NHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLDAVYYLHRMGIVHRDLKPENLL 705
LYLVM+LV GG+LFD I YTE+DAS ++ + A+ YLH + IVHRD+KPENLL
Sbjct: 460 TELYLVMELVKGGDLFDAITSTNKYTERDASGMLYNLASAIKYLHSLNIVHRDIKPENLL 519
Query: 706 YYS-QDEESKIMISDFGLSKMEGKGDVMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVI 882
Y QD + + DFGL+ + + T CGTP YVAPE++A+ Y VD W+ GVI
Sbjct: 520 VYEHQDGSKSLKLGDFGLATI--VDGPLYTVCGTPTYVAPEIIAETGYGLKVDIWAAGVI 577
Query: 883 AYILLCGYPPFYDENDSK--LFEQILKAEYEFDSPYWDDISDSAKDFIRNLMEKD 1041
YILLCG+PPF D + LF+QIL + +F SPYWD++SDSAK+ I ++ D
Sbjct: 578 TYILLCGFPPFRGSGDDQEVLFDQILMGQVDFPSPYWDNVSDSAKELITMMLLVD 632
Score = 28.1 bits (61), Expect(2) = 8e-60
Identities = 11/37 (29%), Positives = 20/37 (54%)
Frame = +3
Query: 1044 NKRYTCEQAARHPWIAGDTALSKNINESVSAQIRKNF 1154
++R++ Q HPW+ D SV+ +I+K+F
Sbjct: 634 DQRFSAVQVLEHPWVNDDGLPENEHQLSVAGKIKKHF 670
>ref|XP_858077.1| PREDICTED: similar to Serine/threonine-protein kinase DCAMKL1
(Doublecortin-like and CAM kinase-like 1) isoform 5
[Canis familiaris].
Length = 741
Score = 222 bits (565), Expect(2) = 8e-60
Identities = 111/235 (47%), Positives = 154/235 (65%), Gaps = 3/235 (1%)
Frame = +1
Query: 346 GAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHENIVALEDIYESP 525
G F+ V E++T + +A+K I K +GKE I+NE+++LR++KH NIV L + + P
Sbjct: 400 GNFAVVKECVERSTAREYALKIIKKSKCRGKEHMIQNEVSILRRVKHPNIVLLIEEMDVP 459
Query: 526 NHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLDAVYYLHRMGIVHRDLKPENLL 705
LYLVM+LV GG+LFD I YTE+DAS ++ + A+ YLH + IVHRD+KPENLL
Sbjct: 460 TELYLVMELVKGGDLFDAITSTNKYTERDASGMLYNLASAIKYLHSLNIVHRDIKPENLL 519
Query: 706 YYS-QDEESKIMISDFGLSKMEGKGDVMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVI 882
Y QD + + DFGL+ + + T CGTP YVAPE++A+ Y VD W+ GVI
Sbjct: 520 VYEHQDGSKSLKLGDFGLATI--VDGPLYTVCGTPTYVAPEIIAETGYGLKVDIWAAGVI 577
Query: 883 AYILLCGYPPFYDENDSK--LFEQILKAEYEFDSPYWDDISDSAKDFIRNLMEKD 1041
YILLCG+PPF D + LF+QIL + +F SPYWD++SDSAK+ I ++ D
Sbjct: 578 TYILLCGFPPFRGSGDDQEVLFDQILMGQVDFPSPYWDNVSDSAKELITMMLLVD 632
Score = 28.1 bits (61), Expect(2) = 8e-60
Identities = 11/37 (29%), Positives = 20/37 (54%)
Frame = +3
Query: 1044 NKRYTCEQAARHPWIAGDTALSKNINESVSAQIRKNF 1154
++R++ Q HPW+ D SV+ +I+K+F
Sbjct: 634 DQRFSAVQVLEHPWVNDDGLPENEHQLSVAGKIKKHF 670
Database: RefSeq49_CP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,874,504
Number of sequences in database: 33,336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33336
Number of Hits to DB: 37,615,290
Number of extensions: 1016558
Number of successful extensions: 6460
Number of sequences better than 1.0e-05: 858
Number of HSP's gapped: 4986
Number of HSP's successfully gapped: 995
Length of query: 384
Length of database: 18,874,504
Length adjustment: 105
Effective length of query: 279
Effective length of database: 15,374,224
Effective search space: 4289408496
Effective search space used: 4289408496
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Animal-Genome cDNA 20110601C-013215
Search to RefSeqBP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-013215
(1154 letters)
Database: RefSeq49_BP.fasta
33,088 sequences; 17,681,374 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_002692107.1| PREDICTED: calcium/calmodulin-dependent prot... 461 e-147
Alignment gi|NP_001070336.1| calcium/calmodulin-dependent protein kinase ... 410 e-128
Alignment gi|XP_605252.2| PREDICTED: calcium/calmodulin-dependent protein... 340 e-111
Alignment gi|NP_001070304.1| calcium/calmodulin-dependent protein kinase ... 360 e-110
Alignment gi|NP_001069787.1| calcium/calmodulin-dependent protein kinase ... 360 e-109
Alignment gi|NP_001068881.1| serine/threonine-protein kinase H1 [Bos taur... 252 3e-70
Alignment gi|NP_001069344.1| caM kinase-like vesicle-associated protein [... 232 1e-67
Alignment gi|XP_002691060.1| PREDICTED: calcium/calmodulin-dependent prot... 243 2e-66
Alignment gi|XP_002694373.1| PREDICTED: doublecortin-like kinase 2 [Bos t... 218 4e-59
Alignment gi|XP_616231.5| PREDICTED: doublecortin-like kinase 2 [Bos taur... 218 4e-59
>ref|XP_002692107.1| PREDICTED: calcium/calmodulin-dependent protein kinase ID-like [Bos
taurus].
Length = 379
Score = 461 bits (1185), Expect(2) = e-147
Identities = 234/252 (92%), Positives = 234/252 (92%), Gaps = 17/252 (6%)
Frame = +1
Query: 346 GAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRK---------------- 477
GAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRK
Sbjct: 9 GAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKFEQNHFSSDGKCGNGR 68
Query: 478 -IKHENIVALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLDAVYY 654
IKHENIVALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLDAVYY
Sbjct: 69 RIKHENIVALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLDAVYY 128
Query: 655 LHRMGIVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGDVMSTACGTPGYVAPEVLA 834
LHRMGIVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGDVMSTACGTPGYVAPEVLA
Sbjct: 129 LHRMGIVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGDVMSTACGTPGYVAPEVLA 188
Query: 835 QKPYSKAVDCWSIGVIAYILLCGYPPFYDENDSKLFEQILKAEYEFDSPYWDDISDSAKD 1014
QKPYSKAVDCWSIGVIAYILLCGYPPFYDENDSKLFEQILKAEYEFDSPYWDDISDSAKD
Sbjct: 189 QKPYSKAVDCWSIGVIAYILLCGYPPFYDENDSKLFEQILKAEYEFDSPYWDDISDSAKD 248
Query: 1015 FIRNLMEKDPIK 1050
FIRNLMEKDP K
Sbjct: 249 FIRNLMEKDPNK 260
Score = 80.9 bits (198), Expect(2) = e-147
Identities = 37/38 (97%), Positives = 38/38 (100%)
Frame = +3
Query: 1041 PNKRYTCEQAARHPWIAGDTALSKNINESVSAQIRKNF 1154
PNKRYTCEQAARHPWIAGDTALSKNI+ESVSAQIRKNF
Sbjct: 258 PNKRYTCEQAARHPWIAGDTALSKNIHESVSAQIRKNF 295
>ref|NP_001070336.1| calcium/calmodulin-dependent protein kinase type 1 [Bos taurus].
Length = 370
Score = 410 bits (1055), Expect(2) = e-128
Identities = 202/235 (85%), Positives = 216/235 (91%)
Frame = +1
Query: 346 GAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHENIVALEDIYESP 525
GAFSEV+LAE+K T K+ A+KCI KKAL+GKE S+ENEIAVL KIKH NIVAL+DIYES
Sbjct: 29 GAFSEVILAEDKRTQKMVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDIYESG 88
Query: 526 NHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLDAVYYLHRMGIVHRDLKPENLL 705
HLYL+MQLVSGGELFDRIVEKGFYTE+DAS LI QVLDAV YLH +GIVHRDLKPENLL
Sbjct: 89 GHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLL 148
Query: 706 YYSQDEESKIMISDFGLSKMEGKGDVMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIA 885
YYS DE+SKIMISDFGLSKME V+STACGTPGYVAPEVLAQKPYSKAVDCWSIGVIA
Sbjct: 149 YYSLDEDSKIMISDFGLSKMEDPSSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIA 208
Query: 886 YILLCGYPPFYDENDSKLFEQILKAEYEFDSPYWDDISDSAKDFIRNLMEKDPIK 1050
YILLCGYPPFYDEND+KLFEQILKAEYEFDSPYWDDISDSAKDFIR+LMEKDP K
Sbjct: 209 YILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEK 263
Score = 67.8 bits (164), Expect(2) = e-128
Identities = 29/38 (76%), Positives = 34/38 (89%)
Frame = +3
Query: 1041 PNKRYTCEQAARHPWIAGDTALSKNINESVSAQIRKNF 1154
P KR+TCEQA +HPWIAGDTAL KNI++SVS QI+KNF
Sbjct: 261 PEKRFTCEQALQHPWIAGDTALDKNIHQSVSEQIKKNF 298
>ref|XP_605252.2| PREDICTED: calcium/calmodulin-dependent protein kinase ID-like,
partial [Bos taurus].
Length = 285
Score = 340 bits (872), Expect(2) = e-111
Identities = 165/166 (99%), Positives = 165/166 (99%)
Frame = +1
Query: 553 VSGGELFDRIVEKGFYTEKDASTLIRQVLDAVYYLHRMGIVHRDLKPENLLYYSQDEESK 732
VSGGELFDRIVEKGFYTEKDASTLIRQVLDAVYYLHRMGIVHRDLKPENLLYYSQDEESK
Sbjct: 1 VSGGELFDRIVEKGFYTEKDASTLIRQVLDAVYYLHRMGIVHRDLKPENLLYYSQDEESK 60
Query: 733 IMISDFGLSKMEGKGDVMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPP 912
IMISDFGLSKMEGKGDVMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPP
Sbjct: 61 IMISDFGLSKMEGKGDVMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPP 120
Query: 913 FYDENDSKLFEQILKAEYEFDSPYWDDISDSAKDFIRNLMEKDPIK 1050
FYDENDSKLFEQILKAEYEFDSPYWDDISDSAKDFIRNLMEKDP K
Sbjct: 121 FYDENDSKLFEQILKAEYEFDSPYWDDISDSAKDFIRNLMEKDPNK 166
Score = 80.9 bits (198), Expect(2) = e-111
Identities = 37/38 (97%), Positives = 38/38 (100%)
Frame = +3
Query: 1041 PNKRYTCEQAARHPWIAGDTALSKNINESVSAQIRKNF 1154
PNKRYTCEQAARHPWIAGDTALSKNI+ESVSAQIRKNF
Sbjct: 164 PNKRYTCEQAARHPWIAGDTALSKNIHESVSAQIRKNF 201
>ref|NP_001070304.1| calcium/calmodulin-dependent protein kinase type 1G [Bos taurus].
Length = 474
Score = 360 bits (923), Expect(2) = e-110
Identities = 179/233 (76%), Positives = 204/233 (87%)
Frame = +1
Query: 346 GAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHENIVALEDIYESP 525
GAFSEV L +++ TGKLFA+KCI KK+ ++SS+ENEIAVL+KIKHENIV LEDIYES
Sbjct: 32 GAFSEVFLVKQRVTGKLFALKCI-KKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYEST 90
Query: 526 NHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLDAVYYLHRMGIVHRDLKPENLL 705
H YLVMQLVSGGELFDRI+E+G YTEKDAS +I+QVL AV YLH GIVHRDLKPENLL
Sbjct: 91 THYYLVMQLVSGGELFDRILERGVYTEKDASLVIQQVLSAVKYLHENGIVHRDLKPENLL 150
Query: 706 YYSQDEESKIMISDFGLSKMEGKGDVMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIA 885
Y + +E SKIMI+DFGLSKME G VMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVI
Sbjct: 151 YLTPEENSKIMITDFGLSKMEQNG-VMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIT 209
Query: 886 YILLCGYPPFYDENDSKLFEQILKAEYEFDSPYWDDISDSAKDFIRNLMEKDP 1044
YILLCGYPPFY+E +SKLFE+I + YEF+SP+WDDIS+SAKDFI +L+EKDP
Sbjct: 210 YILLCGYPPFYEETESKLFEKIKEGYYEFESPFWDDISESAKDFICHLLEKDP 262
Score = 59.7 bits (143), Expect(2) = e-110
Identities = 26/38 (68%), Positives = 32/38 (84%)
Frame = +3
Query: 1041 PNKRYTCEQAARHPWIAGDTALSKNINESVSAQIRKNF 1154
PN+RYTCE+A RHPWI G+TAL ++I SVS QI+KNF
Sbjct: 262 PNERYTCEKALRHPWINGNTALHRDIYPSVSLQIQKNF 299
>ref|NP_001069787.1| calcium/calmodulin-dependent protein kinase type 1B [Bos taurus].
Length = 342
Score = 360 bits (923), Expect(2) = e-109
Identities = 170/235 (72%), Positives = 208/235 (88%)
Frame = +1
Query: 346 GAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHENIVALEDIYESP 525
GAFSEVVLA+E+ + L A+KCIPKKAL+GKE+ +ENEIAVLR++ H NIVALED++ESP
Sbjct: 24 GAFSEVVLAQERGSSHLVALKCIPKKALRGKEALVENEIAVLRRVSHPNIVALEDVHESP 83
Query: 526 NHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLDAVYYLHRMGIVHRDLKPENLL 705
+HLYL M+LV+GGELFDRI+E+G YTEKDAS L+ QVL AV YLH +GIVHRDLKPENLL
Sbjct: 84 SHLYLAMELVTGGELFDRIMERGSYTEKDASHLVAQVLGAVSYLHSLGIVHRDLKPENLL 143
Query: 706 YYSQDEESKIMISDFGLSKMEGKGDVMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIA 885
Y + E+SKIM+SDFGLSK++ G+++ TACGTPGYVAPE+L QKPY KAVD W++GVI+
Sbjct: 144 YATPFEDSKIMVSDFGLSKIQA-GNMLGTACGTPGYVAPELLEQKPYGKAVDVWALGVIS 202
Query: 886 YILLCGYPPFYDENDSKLFEQILKAEYEFDSPYWDDISDSAKDFIRNLMEKDPIK 1050
YILLCGYPPFYDE+D +LF QIL+A YEFDSP+WDDIS+SAKDFIR+L+E+DP K
Sbjct: 203 YILLCGYPPFYDESDPELFSQILRANYEFDSPFWDDISESAKDFIRHLLERDPQK 257
Score = 54.7 bits (130), Expect(2) = e-109
Identities = 24/38 (63%), Positives = 30/38 (78%)
Frame = +3
Query: 1041 PNKRYTCEQAARHPWIAGDTALSKNINESVSAQIRKNF 1154
P KR+TC+QA +H WI+GDTA K+I SVS QI+KNF
Sbjct: 255 PQKRFTCQQALQHLWISGDTAFDKDILGSVSEQIQKNF 292
>ref|NP_001068881.1| serine/threonine-protein kinase H1 [Bos taurus].
Length = 424
Score = 252 bits (643), Expect(2) = 3e-70
Identities = 120/235 (51%), Positives = 170/235 (72%), Gaps = 2/235 (0%)
Frame = +1
Query: 346 GAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHENIVALEDIYESP 525
G+FS VV E +AT + +A+K I K +G+E E+E+ VLR+++H NI+ L +++E+
Sbjct: 107 GSFSRVVRVEHRATRQPYAIKMIETKYREGREVC-ESELRVLRRVRHANIIQLVEVFETQ 165
Query: 526 NHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLDAVYYLHRMGIVHRDLKPENLL 705
+Y+VM+L +GGELFDRI+ KG +TE+DA+ +++ VLD V YLH +GI HRDLKPENLL
Sbjct: 166 ERVYMVMELATGGELFDRIIAKGSFTERDATRVLQMVLDGVRYLHALGITHRDLKPENLL 225
Query: 706 YYSQDEESKIMISDFGLSKMEGKGD--VMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGV 879
YY +SKI+I+DFGL+ KGD +M T CGTP Y+APEVL +KPY+ +VD W++GV
Sbjct: 226 YYHPGTDSKIIITDFGLASARKKGDDCLMKTTCGTPEYIAPEVLVRKPYTNSVDMWALGV 285
Query: 880 IAYILLCGYPPFYDENDSKLFEQILKAEYEFDSPYWDDISDSAKDFIRNLMEKDP 1044
IAYILL G PF D+N ++L+ QIL+ +Y + W +S+ AKDFI L+ DP
Sbjct: 286 IAYILLSGTMPFEDDNRTRLYRQILRGKYSYSGEPWPSVSNLAKDFIDRLLTVDP 340
Score = 32.7 bits (73), Expect(2) = 3e-70
Identities = 16/38 (42%), Positives = 21/38 (55%), Gaps = 2/38 (5%)
Frame = +3
Query: 1041 PNKRYTCEQAARHPWIAGDTALS--KNINESVSAQIRK 1148
P R T QA RHPW+ A S KN++ S+S + K
Sbjct: 340 PGARMTALQALRHPWVVSMAASSSMKNLHRSISQNLLK 377
>ref|NP_001069344.1| caM kinase-like vesicle-associated protein [Bos taurus].
Length = 504
Score = 232 bits (592), Expect(2) = 1e-67
Identities = 112/236 (47%), Positives = 164/236 (69%), Gaps = 8/236 (3%)
Frame = +1
Query: 352 FSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHENIVALEDIYESPNH 531
F E+ A++K TGKL K K+ + + +NEI +L+ +KH NI+ L D++ +
Sbjct: 35 FCEIFRAKDKTTGKLHTCKKFQKRDGRKVRKAAKNEIGILKMVKHPNILQLVDVFVTRKE 94
Query: 532 LYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLDAVYYLHRMGIVHRDLKPENLLYY 711
++ ++L +G E+FD I+++G+Y+E+D S ++RQVL+AV YLH + IVHR+LK ENL+YY
Sbjct: 95 YFIFLELATGREVFDWILDQGYYSERDTSNVVRQVLEAVAYLHSLKIVHRNLKLENLVYY 154
Query: 712 SQDEESKIMISDFGLSKMEGKGDVMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYI 891
++ + SKI+ISDF L+K+E ++ CGTP Y+APEV+ ++ Y + VDCW+IGVI YI
Sbjct: 155 NRLKNSKIVISDFHLAKLE--NGLIKEPCGTPEYLAPEVVGRQRYGRPVDCWAIGVIMYI 212
Query: 892 LLCGYPPFYDE--------NDSKLFEQILKAEYEFDSPYWDDISDSAKDFIRNLME 1035
LL G PPFY+E +D LF +IL +YEFDSPYWDDIS +AKD + LME
Sbjct: 213 LLSGNPPFYEEVEEDDYENHDKNLFRKILAGDYEFDSPYWDDISQAAKDLVTRLME 268
Score = 43.9 bits (102), Expect(2) = 1e-67
Identities = 19/37 (51%), Positives = 25/37 (67%)
Frame = +3
Query: 1044 NKRYTCEQAARHPWIAGDTALSKNINESVSAQIRKNF 1154
++R T E+A H WI+G+ A KNI + V AQI KNF
Sbjct: 272 DQRITAEEAISHEWISGNAASDKNIKDGVCAQIEKNF 308
>ref|XP_002691060.1| PREDICTED: calcium/calmodulin-dependent protein kinase IV-like [Bos
taurus].
Length = 463
Score = 243 bits (619), Expect(2) = 2e-66
Identities = 120/236 (50%), Positives = 164/236 (69%), Gaps = 1/236 (0%)
Frame = +1
Query: 346 GAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHENIVALEDIYESP 525
GA S V ++K T K +A+K + K K + EI VL ++ H NI+ L++I+E+P
Sbjct: 55 GATSIVYRCKQKGTQKPYALKVLKKTVDK---KIVRTEIGVLLRLSHPNIIKLKEIFETP 111
Query: 526 NHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLDAVYYLHRMGIVHRDLKPENLL 705
+ LV++LV+GGELFDRIVEKG+Y+E+DA+ ++Q+L+AV YLH GIVHRDLKPENLL
Sbjct: 112 TEISLVLELVTGGELFDRIVEKGYYSERDAADAVKQILEAVAYLHENGIVHRDLKPENLL 171
Query: 706 YYSQDEESKIMISDFGLSKMEGKGDVMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIA 885
Y + ++ + I+DFGLSK+ +M T CGTPGY APE+L Y VD WS+G+I
Sbjct: 172 YATPAPDAPLKIADFGLSKIVEHQVLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIIT 231
Query: 886 YILLCGYPPFYDE-NDSKLFEQILKAEYEFDSPYWDDISDSAKDFIRNLMEKDPIK 1050
YILLCG+ PFYDE D +F +IL EY F SP+WD++S +AKD +R L+ DP K
Sbjct: 232 YILLCGFEPFYDERGDQFMFRRILNCEYYFISPWWDEVSLNAKDLVRKLIVLDPKK 287
Score = 29.3 bits (64), Expect(2) = 2e-66
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = +3
Query: 1041 PNKRYTCEQAARHPWIAGDTA 1103
P KR T QA +HPW+ G A
Sbjct: 285 PKKRLTTFQALQHPWVTGKAA 305
>ref|XP_002694373.1| PREDICTED: doublecortin-like kinase 2 [Bos taurus].
Length = 972
Score = 218 bits (554), Expect(2) = 4e-59
Identities = 111/234 (47%), Positives = 157/234 (67%), Gaps = 4/234 (1%)
Frame = +1
Query: 346 GAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHENIVALEDIYESP 525
G F+ V +++TGK FA+K I K GKE IENE+++LR++KH NI+ L + E+
Sbjct: 401 GNFAVVKECMDRSTGKEFALKIIDKAKCCGKEHLIENEVSILRRVKHPNIIMLIEEMETA 460
Query: 526 NHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLDAVYYLHRMGIVHRDLKPENLL 705
L+LVM+LV GG+LFD I YTE+D S ++ + +A+ YLH + IVHRD+KPENLL
Sbjct: 461 TELFLVMELVKGGDLFDAITSSTKYTERDGSAMVYNLANALRYLHALNIVHRDIKPENLL 520
Query: 706 YYSQDEESK-IMISDFGLSK-MEGKGDVMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGV 879
+ +K + + DFGL+ +EG + T CGTP YVAPE++A+ Y VD W+ GV
Sbjct: 521 VCEYPDGTKSLKLGDFGLATVVEGP---LYTVCGTPTYVAPEIIAETGYGLKVDVWAAGV 577
Query: 880 IAYILLCGYPPFYDEND--SKLFEQILKAEYEFDSPYWDDISDSAKDFIRNLME 1035
I YILLCG+PPF EN+ LF+QIL + EF +PYWD+I+DSAK+ I +++
Sbjct: 578 ITYILLCGFPPFRSENNLQEDLFDQILAGKLEFPAPYWDNITDSAKELISQMLQ 631
Score = 30.0 bits (66), Expect(2) = 4e-59
Identities = 10/35 (28%), Positives = 20/35 (57%)
Frame = +3
Query: 1050 RYTCEQAARHPWIAGDTALSKNINESVSAQIRKNF 1154
R T Q HPW++ D + N+ V+ +++++F
Sbjct: 637 RCTAGQILSHPWVSDDASQENNMQAEVTGKLKQHF 671
>ref|XP_616231.5| PREDICTED: doublecortin-like kinase 2 [Bos taurus].
Length = 773
Score = 218 bits (554), Expect(2) = 4e-59
Identities = 111/234 (47%), Positives = 157/234 (67%), Gaps = 4/234 (1%)
Frame = +1
Query: 346 GAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHENIVALEDIYESP 525
G F+ V +++TGK FA+K I K GKE IENE+++LR++KH NI+ L + E+
Sbjct: 400 GNFAVVKECMDRSTGKEFALKIIDKAKCCGKEHLIENEVSILRRVKHPNIIMLIEEMETA 459
Query: 526 NHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLDAVYYLHRMGIVHRDLKPENLL 705
L+LVM+LV GG+LFD I YTE+D S ++ + +A+ YLH + IVHRD+KPENLL
Sbjct: 460 TELFLVMELVKGGDLFDAITSSTKYTERDGSAMVYNLANALRYLHALNIVHRDIKPENLL 519
Query: 706 YYSQDEESK-IMISDFGLSK-MEGKGDVMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGV 879
+ +K + + DFGL+ +EG + T CGTP YVAPE++A+ Y VD W+ GV
Sbjct: 520 VCEYPDGTKSLKLGDFGLATVVEGP---LYTVCGTPTYVAPEIIAETGYGLKVDVWAAGV 576
Query: 880 IAYILLCGYPPFYDEND--SKLFEQILKAEYEFDSPYWDDISDSAKDFIRNLME 1035
I YILLCG+PPF EN+ LF+QIL + EF +PYWD+I+DSAK+ I +++
Sbjct: 577 ITYILLCGFPPFRSENNLQEDLFDQILAGKLEFPAPYWDNITDSAKELISQMLQ 630
Score = 30.0 bits (66), Expect(2) = 4e-59
Identities = 10/35 (28%), Positives = 20/35 (57%)
Frame = +3
Query: 1050 RYTCEQAARHPWIAGDTALSKNINESVSAQIRKNF 1154
R T Q HPW++ D + N+ V+ +++++F
Sbjct: 636 RCTAGQILSHPWVSDDASQENNMQAEVTGKLKQHF 670
Database: RefSeq49_BP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 17,681,374
Number of sequences in database: 33,088
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33088
Number of Hits to DB: 37,258,685
Number of extensions: 1195626
Number of successful extensions: 5222
Number of sequences better than 1.0e-05: 580
Number of HSP's gapped: 4188
Number of HSP's successfully gapped: 656
Length of query: 384
Length of database: 17,681,374
Length adjustment: 104
Effective length of query: 280
Effective length of database: 14,240,222
Effective search space: 3987262160
Effective search space used: 3987262160
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to RefSeqSP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-013215
(1154 letters)
Database: RefSeq49_SP.fasta
24,897 sequences; 11,343,932 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001177124.1| calcium/calmodulin-dependent protein kinase ... 414 e-129
Alignment gi|NP_001230864.1| calcium/calmodulin-dependent protein kinase ... 345 e-113
Alignment gi|NP_001230863.1| calcium/calmodulin-dependent protein kinase ... 359 e-110
Alignment gi|NP_001182295.1| calcium/calmodulin-dependent protein kinase ... 357 e-108
Alignment gi|XP_003360887.1| PREDICTED: calcium/calmodulin-dependent prot... 325 e-107
Alignment gi|XP_003358517.1| PREDICTED: caM kinase-like vesicle-associate... 232 7e-68
Alignment gi|XP_003123873.2| PREDICTED: calcium/calmodulin-dependent prot... 243 1e-66
Alignment gi|XP_003354404.1| PREDICTED: calcium/calmodulin-dependent prot... 214 3e-58
Alignment gi|NP_999358.1| calcium/calmodulin-dependent protein kinase typ... 205 2e-55
Alignment gi|NP_999546.1| calcium/calmodulin-dependent protein kinase typ... 209 3e-54
>ref|NP_001177124.1| calcium/calmodulin-dependent protein kinase type 1 [Sus scrofa].
Length = 370
Score = 414 bits (1063), Expect(2) = e-129
Identities = 204/235 (86%), Positives = 217/235 (92%)
Frame = +1
Query: 346 GAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHENIVALEDIYESP 525
GAFSEV+LAE+K T KL A+KCI KKAL+GKE S+ENEIAVL KIKH NIVAL+DIYES
Sbjct: 29 GAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDIYESG 88
Query: 526 NHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLDAVYYLHRMGIVHRDLKPENLL 705
HLYL+MQLVSGGELFDRIVEKGFYTE+DAS LI QVLDAV YLH +GIVHRDLKPENLL
Sbjct: 89 GHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLL 148
Query: 706 YYSQDEESKIMISDFGLSKMEGKGDVMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIA 885
YYS DE+SKIMISDFGLSKME G V+STACGTPGYVAPEVLAQKPYSKAVDCWSIGVIA
Sbjct: 149 YYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIA 208
Query: 886 YILLCGYPPFYDENDSKLFEQILKAEYEFDSPYWDDISDSAKDFIRNLMEKDPIK 1050
YILLCGYPPFYDEND+KLFEQILKAEYEFDSPYWDDISDSAKDFIR+LMEKDP K
Sbjct: 209 YILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEK 263
Score = 66.6 bits (161), Expect(2) = e-129
Identities = 28/38 (73%), Positives = 34/38 (89%)
Frame = +3
Query: 1041 PNKRYTCEQAARHPWIAGDTALSKNINESVSAQIRKNF 1154
P KR+TC+QA +HPWIAGDTAL KNI++SVS QI+KNF
Sbjct: 261 PEKRFTCDQALQHPWIAGDTALDKNIHQSVSEQIKKNF 298
>ref|NP_001230864.1| calcium/calmodulin-dependent protein kinase ID [Sus scrofa].
Length = 288
Score = 345 bits (886), Expect(2) = e-113
Identities = 168/169 (99%), Positives = 168/169 (99%)
Frame = +1
Query: 544 MQLVSGGELFDRIVEKGFYTEKDASTLIRQVLDAVYYLHRMGIVHRDLKPENLLYYSQDE 723
MQLVSGGELFDRIVEKGFYTEKDASTLIRQVLDAVYYLHRMGIVHRDLKPENLLYYSQDE
Sbjct: 1 MQLVSGGELFDRIVEKGFYTEKDASTLIRQVLDAVYYLHRMGIVHRDLKPENLLYYSQDE 60
Query: 724 ESKIMISDFGLSKMEGKGDVMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 903
ESKIMISDFGLSKMEGKGDVMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG
Sbjct: 61 ESKIMISDFGLSKMEGKGDVMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 120
Query: 904 YPPFYDENDSKLFEQILKAEYEFDSPYWDDISDSAKDFIRNLMEKDPIK 1050
YPPFYDENDSKLFEQILKAEYEFDSPYWDDISDSAKDFIRNLMEKDP K
Sbjct: 121 YPPFYDENDSKLFEQILKAEYEFDSPYWDDISDSAKDFIRNLMEKDPNK 169
Score = 80.9 bits (198), Expect(2) = e-113
Identities = 37/38 (97%), Positives = 38/38 (100%)
Frame = +3
Query: 1041 PNKRYTCEQAARHPWIAGDTALSKNINESVSAQIRKNF 1154
PNKRYTCEQAARHPWIAGDTALSKNI+ESVSAQIRKNF
Sbjct: 167 PNKRYTCEQAARHPWIAGDTALSKNIHESVSAQIRKNF 204
>ref|NP_001230863.1| calcium/calmodulin-dependent protein kinase IG [Sus scrofa].
Length = 475
Score = 359 bits (922), Expect(2) = e-110
Identities = 179/233 (76%), Positives = 204/233 (87%)
Frame = +1
Query: 346 GAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHENIVALEDIYESP 525
GAFSEV L +++ TGKLFA+KCI KK+ ++SS+ENEIAVL+KIKHENIV LEDIYES
Sbjct: 32 GAFSEVFLVKQRVTGKLFALKCI-KKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESS 90
Query: 526 NHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLDAVYYLHRMGIVHRDLKPENLL 705
H YLVMQLVSGGELFDRI+E+G YTE+DAS +IRQVL AV YLH GIVHRDLKPENLL
Sbjct: 91 THYYLVMQLVSGGELFDRILERGVYTERDASLVIRQVLAAVKYLHENGIVHRDLKPENLL 150
Query: 706 YYSQDEESKIMISDFGLSKMEGKGDVMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIA 885
Y + +E SKIMI+DFGLSKME G VMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVI
Sbjct: 151 YLTPEENSKIMITDFGLSKMEQSG-VMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIT 209
Query: 886 YILLCGYPPFYDENDSKLFEQILKAEYEFDSPYWDDISDSAKDFIRNLMEKDP 1044
YILLCGYPPFY+E +SKLFE+I + YEF+SP+WDDIS+SAKDFI +L+EKDP
Sbjct: 210 YILLCGYPPFYEETESKLFEKIKEGYYEFESPFWDDISESAKDFICHLLEKDP 262
Score = 57.4 bits (137), Expect(2) = e-110
Identities = 25/38 (65%), Positives = 31/38 (81%)
Frame = +3
Query: 1041 PNKRYTCEQAARHPWIAGDTALSKNINESVSAQIRKNF 1154
P +RYTCE+A RHPWI G+TAL ++I SVS QI+KNF
Sbjct: 262 PKERYTCEKALRHPWINGNTALHRDIYPSVSLQIQKNF 299
>ref|NP_001182295.1| calcium/calmodulin-dependent protein kinase type 1B [Sus scrofa].
Length = 343
Score = 357 bits (915), Expect(2) = e-108
Identities = 169/235 (71%), Positives = 207/235 (88%)
Frame = +1
Query: 346 GAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHENIVALEDIYESP 525
GAFSEVVLA+E+ + L A+KCIPKKAL+GKE+ +ENEIAVLR++ H NIVALED++ESP
Sbjct: 24 GAFSEVVLAQERGSSHLVALKCIPKKALRGKEALVENEIAVLRRVSHPNIVALEDVHESP 83
Query: 526 NHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLDAVYYLHRMGIVHRDLKPENLL 705
+HLYL M+LV+GGELFDRI+E+G YTEKDAS L+ QVL AV YLH +GIVHRDLKPENLL
Sbjct: 84 SHLYLAMELVTGGELFDRIMERGSYTEKDASHLVGQVLGAVSYLHSLGIVHRDLKPENLL 143
Query: 706 YYSQDEESKIMISDFGLSKMEGKGDVMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIA 885
Y + E+SKIM+SDFGLSK++ G+++ TACGTPGYVAPE+L QKPY KAVD W++ VI+
Sbjct: 144 YATPFEDSKIMVSDFGLSKIQA-GNMLGTACGTPGYVAPELLEQKPYGKAVDVWALXVIS 202
Query: 886 YILLCGYPPFYDENDSKLFEQILKAEYEFDSPYWDDISDSAKDFIRNLMEKDPIK 1050
YILLCGYPPFYDE+D +LF QIL+A YEFDSP+WDDIS+SAKDFIR+L+E+DP K
Sbjct: 203 YILLCGYPPFYDESDPELFSQILRASYEFDSPFWDDISESAKDFIRHLLERDPQK 257
Score = 52.8 bits (125), Expect(2) = e-108
Identities = 23/38 (60%), Positives = 29/38 (76%)
Frame = +3
Query: 1041 PNKRYTCEQAARHPWIAGDTALSKNINESVSAQIRKNF 1154
P KR+TC+QA +H WI+GD A K+I SVS QI+KNF
Sbjct: 255 PQKRFTCQQALQHLWISGDAAFDKDILGSVSEQIQKNF 292
>ref|XP_003360887.1| PREDICTED: calcium/calmodulin-dependent protein kinase type 1D-like
[Sus scrofa].
Length = 421
Score = 325 bits (833), Expect(2) = e-107
Identities = 158/176 (89%), Positives = 166/176 (94%)
Frame = +1
Query: 523 PNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLDAVYYLHRMGIVHRDLKPENL 702
P+H ++M++VSGGELFDRIVEKGFYTEKDASTLIRQVLDAVYYLHRMGIVHRDLKPENL
Sbjct: 3 PSH-NMIMRIVSGGELFDRIVEKGFYTEKDASTLIRQVLDAVYYLHRMGIVHRDLKPENL 61
Query: 703 LYYSQDEESKIMISDFGLSKMEGKGDVMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVI 882
LYYSQDEESKIMISDFGLSKME G + + CGT G+VAPEVLAQKPYSKAVDCWSIGVI
Sbjct: 62 LYYSQDEESKIMISDFGLSKMEDPGSIPAGVCGTSGWVAPEVLAQKPYSKAVDCWSIGVI 121
Query: 883 AYILLCGYPPFYDENDSKLFEQILKAEYEFDSPYWDDISDSAKDFIRNLMEKDPIK 1050
AYILLCGYPPFYDENDSKLFEQILKAEYEFDSPYWDDISDSAKDFIRNLMEKDP K
Sbjct: 122 AYILLCGYPPFYDENDSKLFEQILKAEYEFDSPYWDDISDSAKDFIRNLMEKDPNK 177
Score = 80.9 bits (198), Expect(2) = e-107
Identities = 37/38 (97%), Positives = 38/38 (100%)
Frame = +3
Query: 1041 PNKRYTCEQAARHPWIAGDTALSKNINESVSAQIRKNF 1154
PNKRYTCEQAARHPWIAGDTALSKNI+ESVSAQIRKNF
Sbjct: 175 PNKRYTCEQAARHPWIAGDTALSKNIHESVSAQIRKNF 212
>ref|XP_003358517.1| PREDICTED: caM kinase-like vesicle-associated protein [Sus scrofa].
Length = 503
Score = 232 bits (592), Expect(2) = 7e-68
Identities = 112/236 (47%), Positives = 164/236 (69%), Gaps = 8/236 (3%)
Frame = +1
Query: 352 FSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHENIVALEDIYESPNH 531
F E+ A++K TGKL K K+ + + +NEI +L+ +KH NI+ L D++ +
Sbjct: 35 FCEIFRAKDKTTGKLHTCKKFQKRDGRKVRKAAKNEIGILKMVKHPNILQLVDVFVTRKE 94
Query: 532 LYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLDAVYYLHRMGIVHRDLKPENLLYY 711
++ ++L +G E+FD I+++G+Y+E+D S ++RQVL+AV YLH + IVHR+LK ENL+YY
Sbjct: 95 YFIFLELATGREVFDWILDQGYYSERDTSNVVRQVLEAVAYLHSLKIVHRNLKLENLVYY 154
Query: 712 SQDEESKIMISDFGLSKMEGKGDVMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYI 891
++ + SKI+ISDF L+K+E ++ CGTP Y+APEV+ ++ Y + VDCW+IGVI YI
Sbjct: 155 NRLKNSKIVISDFHLAKLE--NGLIKEPCGTPEYLAPEVVGRQRYGRPVDCWAIGVIMYI 212
Query: 892 LLCGYPPFYDE--------NDSKLFEQILKAEYEFDSPYWDDISDSAKDFIRNLME 1035
LL G PPFY+E +D LF +IL +YEFDSPYWDDIS +AKD + LME
Sbjct: 213 LLSGNPPFYEEVEEDDYENHDKNLFRKILAGDYEFDSPYWDDISQAAKDLVTRLME 268
Score = 43.9 bits (102), Expect(2) = 7e-68
Identities = 19/37 (51%), Positives = 25/37 (67%)
Frame = +3
Query: 1044 NKRYTCEQAARHPWIAGDTALSKNINESVSAQIRKNF 1154
++R T E+A H WI+G+ A KNI + V AQI KNF
Sbjct: 272 DQRITAEEAISHEWISGNAASDKNIKDGVCAQIEKNF 308
>ref|XP_003123873.2| PREDICTED: calcium/calmodulin-dependent protein kinase type IV [Sus
scrofa].
Length = 551
Score = 243 bits (619), Expect(2) = 1e-66
Identities = 120/236 (50%), Positives = 164/236 (69%), Gaps = 1/236 (0%)
Frame = +1
Query: 346 GAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHENIVALEDIYESP 525
GA S V ++K T K +A+K + K K + EI VL ++ H NI+ L++I+E+P
Sbjct: 133 GATSIVYRCKQKGTQKPYALKVLKKTVDK---KIVRTEIGVLLRLSHPNIIKLKEIFETP 189
Query: 526 NHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLDAVYYLHRMGIVHRDLKPENLL 705
+ LV++LV+GGELFDRIVEKG+Y+E+DA+ ++Q+L+AV YLH GIVHRDLKPENLL
Sbjct: 190 TEISLVLELVTGGELFDRIVEKGYYSERDAADAVKQILEAVAYLHENGIVHRDLKPENLL 249
Query: 706 YYSQDEESKIMISDFGLSKMEGKGDVMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIA 885
Y + ++ + I+DFGLSK+ +M T CGTPGY APE+L Y VD WS+G+I
Sbjct: 250 YATPAPDAPLKIADFGLSKIVEHQVLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIIT 309
Query: 886 YILLCGYPPFYDE-NDSKLFEQILKAEYEFDSPYWDDISDSAKDFIRNLMEKDPIK 1050
YILLCG+ PFYDE D +F +IL EY F SP+WD++S +AKD +R L+ DP K
Sbjct: 310 YILLCGFEPFYDERGDQFMFRRILNCEYYFISPWWDEVSLNAKDLVRKLIVLDPKK 365
Score = 29.3 bits (64), Expect(2) = 1e-66
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = +3
Query: 1041 PNKRYTCEQAARHPWIAGDTA 1103
P KR T QA +HPW+ G A
Sbjct: 363 PKKRLTTFQALQHPWVTGKAA 383
>ref|XP_003354404.1| PREDICTED: calcium/calmodulin-dependent protein kinase type II
subunit alpha-like [Sus scrofa].
Length = 478
Score = 214 bits (546), Expect(2) = 3e-58
Identities = 108/237 (45%), Positives = 153/237 (64%), Gaps = 2/237 (0%)
Frame = +1
Query: 346 GAFSEVVLAEEKATGKLFAVKCIPKKALKGKE-SSIENEIAVLRKIKHENIVALEDIYES 522
GAFS V + G+ +A K I K L ++ +E E + R +KH NIV L D
Sbjct: 22 GAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISE 81
Query: 523 PNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLDAVYYLHRMGIVHRDLKPENL 702
H YL+ LV+GGELF+ IV + +Y+E DAS I+Q+L+AV + H+MG+VHRDLKPENL
Sbjct: 82 EGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMGVVHRDLKPENL 141
Query: 703 LYYSQDEESKIMISDFGLS-KMEGKGDVMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGV 879
L S+ + + + ++DFGL+ ++EG+ GTPGY++PEVL + PY K VD W+ GV
Sbjct: 142 LLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGV 201
Query: 880 IAYILLCGYPPFYDENDSKLFEQILKAEYEFDSPYWDDISDSAKDFIRNLMEKDPIK 1050
I YILL GYPPF+DE+ +L++QI Y+F SP WD ++ AKD I ++ +P K
Sbjct: 202 ILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLINKMLTINPSK 258
Score = 29.3 bits (64), Expect(2) = 3e-58
Identities = 11/38 (28%), Positives = 21/38 (55%)
Frame = +3
Query: 1041 PNKRYTCEQAARHPWIAGDTALSKNINESVSAQIRKNF 1154
P+KR T +A +HPWI+ + ++ ++ + K F
Sbjct: 256 PSKRITAAEALKHPWISHRSTVASCMHRQETVDCLKKF 293
>ref|NP_999358.1| calcium/calmodulin-dependent protein kinase type II subunit gamma
[Sus scrofa].
Length = 539
Score = 205 bits (521), Expect(2) = 2e-55
Identities = 105/237 (44%), Positives = 151/237 (63%), Gaps = 2/237 (0%)
Frame = +1
Query: 346 GAFSEVVLAEEKATGKLFAVKCIPKKALKGKE-SSIENEIAVLRKIKHENIVALEDIYES 522
GAFS V +K + + +A K I K L ++ +E E + R +KH NIV L D
Sbjct: 23 GAFSVVRRCVKKTSTQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISE 82
Query: 523 PNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLDAVYYLHRMGIVHRDLKPENL 702
YLV LV+GGELF+ IV + +Y+E DAS I Q+L++V ++H+ IVHRDLKPENL
Sbjct: 83 EGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIHQILESVNHIHQHDIVHRDLKPENL 142
Query: 703 LYYSQDEESKIMISDFGLS-KMEGKGDVMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGV 879
L S+ + + + ++DFGL+ +++G+ GTPGY++PEVL + PY K VD W+ GV
Sbjct: 143 LLASKCKGAAVKLADFGLAIEVQGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDIWACGV 202
Query: 880 IAYILLCGYPPFYDENDSKLFEQILKAEYEFDSPYWDDISDSAKDFIRNLMEKDPIK 1050
I YILL GYPPF+DE+ KL++QI Y+F SP WD ++ AK+ I ++ +P K
Sbjct: 203 ILYILLVGYPPFWDEDQHKLYQQIKAGAYDFPSPEWDTVTPEAKNLINQMLTINPAK 259
Score = 29.6 bits (65), Expect(2) = 2e-55
Identities = 10/38 (26%), Positives = 21/38 (55%)
Frame = +3
Query: 1041 PNKRYTCEQAARHPWIAGDTALSKNINESVSAQIRKNF 1154
P KR T +QA +HPW+ + ++ ++ + + + F
Sbjct: 257 PAKRITADQALKHPWVCQRSTVASMMHRQETVECLRKF 294
>ref|NP_999546.1| calcium/calmodulin-dependent protein kinase type II subunit delta
[Sus scrofa].
Length = 499
Score = 209 bits (531), Expect = 3e-54
Identities = 109/245 (44%), Positives = 152/245 (62%), Gaps = 2/245 (0%)
Frame = +1
Query: 346 GAFSEVVLAEEKATGKLFAVKCIPKKALKGKE-SSIENEIAVLRKIKHENIVALEDIYES 522
GAFS V + TG+ +A K I K L ++ +E E + R +KH NIV L D
Sbjct: 23 GAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISE 82
Query: 523 PNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLDAVYYLHRMGIVHRDLKPENL 702
YLV LV+GGELF+ IV + +Y+E DAS I+Q+L++V + H GIVHRDLKPENL
Sbjct: 83 EGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNHCHLNGIVHRDLKPENL 142
Query: 703 LYYSQDEESKIMISDFGLS-KMEGKGDVMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGV 879
L S+ + + + ++DFGL+ +++G GTPGY++PEVL + PY K VD W+ GV
Sbjct: 143 LLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKDPYGKPVDMWACGV 202
Query: 880 IAYILLCGYPPFYDENDSKLFEQILKAEYEFDSPYWDDISDSAKDFIRNLMEKDPIKDTH 1059
I YILL GYPPF+DE+ +L++QI Y+F SP WD ++ AKD I ++ +P K
Sbjct: 203 ILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLINKMLTINPAKRIT 262
Query: 1060 VSRQL 1074
S L
Sbjct: 263 ASEAL 267
Database: RefSeq49_SP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 11,343,932
Number of sequences in database: 24,897
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 24897
Number of Hits to DB: 25,866,743
Number of extensions: 1096526
Number of successful extensions: 3430
Number of sequences better than 1.0e-05: 411
Number of HSP's gapped: 2768
Number of HSP's successfully gapped: 457
Length of query: 384
Length of database: 11,343,932
Length adjustment: 101
Effective length of query: 283
Effective length of database: 8,829,335
Effective search space: 2498701805
Effective search space used: 2498701805
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)
Search to RefSeqMP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-013215
(1154 letters)
Database: RefSeq49_MP.fasta
30,036 sequences; 15,617,559 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_796317.2| calcium/calmodulin-dependent protein kinase typ... 471 e-150
Alignment gi|NP_598687.1| calcium/calmodulin-dependent protein kinase typ... 414 e-129
Alignment gi|NP_659066.1| calcium/calmodulin-dependent protein kinase typ... 358 e-110
Alignment gi|NP_036170.1| calcium/calmodulin-dependent protein kinase typ... 358 e-108
Alignment gi|NP_001186281.1| calcium/calmodulin-dependent protein kinase ... 358 e-108
Alignment gi|NP_001186280.1| calcium/calmodulin-dependent protein kinase ... 358 e-108
Alignment gi|NP_775608.1| serine/threonine-protein kinase H1 [Mus musculu... 250 8e-70
Alignment gi|NP_663596.1| caM kinase-like vesicle-associated protein [Mus... 232 9e-68
Alignment gi|NP_033923.2| calcium/calmodulin-dependent protein kinase typ... 241 4e-66
Alignment gi|XP_003086850.1| PREDICTED: calcium/calmodulin-dependent prot... 231 9e-62
>ref|NP_796317.2| calcium/calmodulin-dependent protein kinase type 1D [Mus musculus].
Length = 385
Score = 471 bits (1213), Expect(2) = e-150
Identities = 234/235 (99%), Positives = 234/235 (99%)
Frame = +1
Query: 346 GAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHENIVALEDIYESP 525
GAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHENIVALEDIYESP
Sbjct: 32 GAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHENIVALEDIYESP 91
Query: 526 NHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLDAVYYLHRMGIVHRDLKPENLL 705
NHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLDAVYYLHRMGIVHRDLKPENLL
Sbjct: 92 NHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLDAVYYLHRMGIVHRDLKPENLL 151
Query: 706 YYSQDEESKIMISDFGLSKMEGKGDVMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIA 885
YYSQDEESKIMISDFGLSKMEGKGDVMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIA
Sbjct: 152 YYSQDEESKIMISDFGLSKMEGKGDVMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIA 211
Query: 886 YILLCGYPPFYDENDSKLFEQILKAEYEFDSPYWDDISDSAKDFIRNLMEKDPIK 1050
YILLCGYPPFYDENDSKLFEQILKAEYEFDSPYWDDISDSAKDFIRNLMEKDP K
Sbjct: 212 YILLCGYPPFYDENDSKLFEQILKAEYEFDSPYWDDISDSAKDFIRNLMEKDPNK 266
Score = 80.9 bits (198), Expect(2) = e-150
Identities = 37/38 (97%), Positives = 38/38 (100%)
Frame = +3
Query: 1041 PNKRYTCEQAARHPWIAGDTALSKNINESVSAQIRKNF 1154
PNKRYTCEQAARHPWIAGDTALSKNI+ESVSAQIRKNF
Sbjct: 264 PNKRYTCEQAARHPWIAGDTALSKNIHESVSAQIRKNF 301
>ref|NP_598687.1| calcium/calmodulin-dependent protein kinase type 1 [Mus musculus].
Length = 374
Score = 414 bits (1063), Expect(2) = e-129
Identities = 204/235 (86%), Positives = 217/235 (92%)
Frame = +1
Query: 346 GAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHENIVALEDIYESP 525
GAFSEV+LAE+K T KL A+KCI KKAL+GKE S+ENEIAVL KIKH NIVAL+DIYES
Sbjct: 29 GAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDIYESG 88
Query: 526 NHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLDAVYYLHRMGIVHRDLKPENLL 705
HLYL+MQLVSGGELFDRIVEKGFYTE+DAS LI QVLDAV YLH +GIVHRDLKPENLL
Sbjct: 89 GHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLL 148
Query: 706 YYSQDEESKIMISDFGLSKMEGKGDVMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIA 885
YYS DE+SKIMISDFGLSKME G V+STACGTPGYVAPEVLAQKPYSKAVDCWSIGVIA
Sbjct: 149 YYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIA 208
Query: 886 YILLCGYPPFYDENDSKLFEQILKAEYEFDSPYWDDISDSAKDFIRNLMEKDPIK 1050
YILLCGYPPFYDEND+KLFEQILKAEYEFDSPYWDDISDSAKDFIR+LMEKDP K
Sbjct: 209 YILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEK 263
Score = 67.8 bits (164), Expect(2) = e-129
Identities = 29/38 (76%), Positives = 34/38 (89%)
Frame = +3
Query: 1041 PNKRYTCEQAARHPWIAGDTALSKNINESVSAQIRKNF 1154
P KR+TCEQA +HPWIAGDTAL KNI++SVS QI+KNF
Sbjct: 261 PEKRFTCEQALQHPWIAGDTALDKNIHQSVSEQIKKNF 298
>ref|NP_659066.1| calcium/calmodulin-dependent protein kinase type 1G [Mus musculus].
Length = 477
Score = 358 bits (920), Expect(2) = e-110
Identities = 178/233 (76%), Positives = 204/233 (87%)
Frame = +1
Query: 346 GAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHENIVALEDIYESP 525
GAFSEV L +++ TGKLFA+KCI KK+ ++SS+ENEIAVL++IKHENIV LEDIYES
Sbjct: 32 GAFSEVFLVKQRVTGKLFALKCI-KKSPAFRDSSLENEIAVLKRIKHENIVTLEDIYEST 90
Query: 526 NHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLDAVYYLHRMGIVHRDLKPENLL 705
H YLVMQLVSGGELFDRI+E+G YTEKDAS +I+QVL AV YLH GIVHRDLKPENLL
Sbjct: 91 THYYLVMQLVSGGELFDRILERGVYTEKDASLVIQQVLSAVKYLHENGIVHRDLKPENLL 150
Query: 706 YYSQDEESKIMISDFGLSKMEGKGDVMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIA 885
Y + +E SKIMI+DFGLSKME G VMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVI
Sbjct: 151 YLTPEENSKIMITDFGLSKMEQNG-VMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIT 209
Query: 886 YILLCGYPPFYDENDSKLFEQILKAEYEFDSPYWDDISDSAKDFIRNLMEKDP 1044
YILLCGYPPFY+E +SKLFE+I + YEF+SP+WDDIS+SAKDFI +L+EKDP
Sbjct: 210 YILLCGYPPFYEETESKLFEKIKEGYYEFESPFWDDISESAKDFICHLLEKDP 262
Score = 59.7 bits (143), Expect(2) = e-110
Identities = 26/38 (68%), Positives = 32/38 (84%)
Frame = +3
Query: 1041 PNKRYTCEQAARHPWIAGDTALSKNINESVSAQIRKNF 1154
PN+RYTCE+A RHPWI G+TAL ++I SVS QI+KNF
Sbjct: 262 PNERYTCEKALRHPWIDGNTALHRDIYPSVSLQIQKNF 299
>ref|NP_036170.1| calcium/calmodulin-dependent protein kinase type 1B [Mus musculus].
Length = 343
Score = 358 bits (920), Expect(2) = e-108
Identities = 170/235 (72%), Positives = 208/235 (88%)
Frame = +1
Query: 346 GAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHENIVALEDIYESP 525
GAFSEV+LA+E+ + L A+KCIPKKAL+GKE+ +ENEIAVLR+I H NIVALED++ESP
Sbjct: 24 GAFSEVMLAQERGSAHLVALKCIPKKALRGKEALVENEIAVLRRISHPNIVALEDVHESP 83
Query: 526 NHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLDAVYYLHRMGIVHRDLKPENLL 705
+HLYL M+LV+GGELFDRI+E+G YTEKDAS L+ QVL AV YLH +GIVHRDLKPENLL
Sbjct: 84 SHLYLAMELVTGGELFDRIMERGSYTEKDASHLVGQVLGAVSYLHSLGIVHRDLKPENLL 143
Query: 706 YYSQDEESKIMISDFGLSKMEGKGDVMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIA 885
Y + E+SKIM+SDFGLSK++ G+++ TACGTPGYVAPE+L QKPY KAVD W++GVI+
Sbjct: 144 YATPFEDSKIMVSDFGLSKIQA-GNMLGTACGTPGYVAPELLEQKPYGKAVDVWALGVIS 202
Query: 886 YILLCGYPPFYDENDSKLFEQILKAEYEFDSPYWDDISDSAKDFIRNLMEKDPIK 1050
YILLCGYPPFYDE+D +LF QIL+A YEFDSP+WDDIS+SAKDFIR+L+E+DP K
Sbjct: 203 YILLCGYPPFYDESDPELFSQILRASYEFDSPFWDDISESAKDFIRHLLERDPQK 257
Score = 51.6 bits (122), Expect(2) = e-108
Identities = 22/38 (57%), Positives = 29/38 (76%)
Frame = +3
Query: 1041 PNKRYTCEQAARHPWIAGDTALSKNINESVSAQIRKNF 1154
P KR+TC+QA +H WI+GD A ++I SVS QI+KNF
Sbjct: 255 PQKRFTCQQALQHLWISGDAAFDRDILGSVSEQIQKNF 292
>ref|NP_001186281.1| calcium/calmodulin-dependent protein kinase type 1B [Mus musculus].
Length = 343
Score = 358 bits (920), Expect(2) = e-108
Identities = 170/235 (72%), Positives = 208/235 (88%)
Frame = +1
Query: 346 GAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHENIVALEDIYESP 525
GAFSEV+LA+E+ + L A+KCIPKKAL+GKE+ +ENEIAVLR+I H NIVALED++ESP
Sbjct: 24 GAFSEVMLAQERGSAHLVALKCIPKKALRGKEALVENEIAVLRRISHPNIVALEDVHESP 83
Query: 526 NHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLDAVYYLHRMGIVHRDLKPENLL 705
+HLYL M+LV+GGELFDRI+E+G YTEKDAS L+ QVL AV YLH +GIVHRDLKPENLL
Sbjct: 84 SHLYLAMELVTGGELFDRIMERGSYTEKDASHLVGQVLGAVSYLHSLGIVHRDLKPENLL 143
Query: 706 YYSQDEESKIMISDFGLSKMEGKGDVMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIA 885
Y + E+SKIM+SDFGLSK++ G+++ TACGTPGYVAPE+L QKPY KAVD W++GVI+
Sbjct: 144 YATPFEDSKIMVSDFGLSKIQA-GNMLGTACGTPGYVAPELLEQKPYGKAVDVWALGVIS 202
Query: 886 YILLCGYPPFYDENDSKLFEQILKAEYEFDSPYWDDISDSAKDFIRNLMEKDPIK 1050
YILLCGYPPFYDE+D +LF QIL+A YEFDSP+WDDIS+SAKDFIR+L+E+DP K
Sbjct: 203 YILLCGYPPFYDESDPELFSQILRASYEFDSPFWDDISESAKDFIRHLLERDPQK 257
Score = 51.6 bits (122), Expect(2) = e-108
Identities = 22/38 (57%), Positives = 29/38 (76%)
Frame = +3
Query: 1041 PNKRYTCEQAARHPWIAGDTALSKNINESVSAQIRKNF 1154
P KR+TC+QA +H WI+GD A ++I SVS QI+KNF
Sbjct: 255 PQKRFTCQQALQHLWISGDAAFDRDILGSVSEQIQKNF 292
>ref|NP_001186280.1| calcium/calmodulin-dependent protein kinase type 1B [Mus musculus].
Length = 343
Score = 358 bits (920), Expect(2) = e-108
Identities = 170/235 (72%), Positives = 208/235 (88%)
Frame = +1
Query: 346 GAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHENIVALEDIYESP 525
GAFSEV+LA+E+ + L A+KCIPKKAL+GKE+ +ENEIAVLR+I H NIVALED++ESP
Sbjct: 24 GAFSEVMLAQERGSAHLVALKCIPKKALRGKEALVENEIAVLRRISHPNIVALEDVHESP 83
Query: 526 NHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLDAVYYLHRMGIVHRDLKPENLL 705
+HLYL M+LV+GGELFDRI+E+G YTEKDAS L+ QVL AV YLH +GIVHRDLKPENLL
Sbjct: 84 SHLYLAMELVTGGELFDRIMERGSYTEKDASHLVGQVLGAVSYLHSLGIVHRDLKPENLL 143
Query: 706 YYSQDEESKIMISDFGLSKMEGKGDVMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIA 885
Y + E+SKIM+SDFGLSK++ G+++ TACGTPGYVAPE+L QKPY KAVD W++GVI+
Sbjct: 144 YATPFEDSKIMVSDFGLSKIQA-GNMLGTACGTPGYVAPELLEQKPYGKAVDVWALGVIS 202
Query: 886 YILLCGYPPFYDENDSKLFEQILKAEYEFDSPYWDDISDSAKDFIRNLMEKDPIK 1050
YILLCGYPPFYDE+D +LF QIL+A YEFDSP+WDDIS+SAKDFIR+L+E+DP K
Sbjct: 203 YILLCGYPPFYDESDPELFSQILRASYEFDSPFWDDISESAKDFIRHLLERDPQK 257
Score = 51.6 bits (122), Expect(2) = e-108
Identities = 22/38 (57%), Positives = 29/38 (76%)
Frame = +3
Query: 1041 PNKRYTCEQAARHPWIAGDTALSKNINESVSAQIRKNF 1154
P KR+TC+QA +H WI+GD A ++I SVS QI+KNF
Sbjct: 255 PQKRFTCQQALQHLWISGDAAFDRDILGSVSEQIQKNF 292
>ref|NP_775608.1| serine/threonine-protein kinase H1 [Mus musculus].
Length = 424
Score = 250 bits (639), Expect(2) = 8e-70
Identities = 120/235 (51%), Positives = 170/235 (72%), Gaps = 2/235 (0%)
Frame = +1
Query: 346 GAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHENIVALEDIYESP 525
G+FS VV E +AT + +A+K I K +G+E E+E+ VLR+++H NI+ L +++E+
Sbjct: 107 GSFSRVVRVEHRATRQPYAIKMIETKYREGREVC-ESELRVLRRVRHANIIQLVEVFETQ 165
Query: 526 NHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLDAVYYLHRMGIVHRDLKPENLL 705
+Y+VM+L +GGELFDRI+ KG +TE+DA+ +++ VLD V YLH +GI HRDLKPENLL
Sbjct: 166 ERVYMVMELATGGELFDRIIAKGSFTERDATRVLQMVLDGVRYLHALGITHRDLKPENLL 225
Query: 706 YYSQDEESKIMISDFGLSKMEGKGD--VMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGV 879
YY +SKI+I+DFGL+ KGD +M T CGTP Y+APEVL +KPY+ +VD W++GV
Sbjct: 226 YYHPGTDSKIIITDFGLASARKKGDDCLMKTTCGTPEYIAPEVLVRKPYTNSVDMWALGV 285
Query: 880 IAYILLCGYPPFYDENDSKLFEQILKAEYEFDSPYWDDISDSAKDFIRNLMEKDP 1044
IAYILL G PF D+N ++L+ QIL+ +Y + W +S+ AKDFI L+ DP
Sbjct: 286 IAYILLSGTMPFEDDNRTRLYRQILRGKYSYLGEPWPSVSNLAKDFIDRLLTVDP 340
Score = 32.7 bits (73), Expect(2) = 8e-70
Identities = 16/38 (42%), Positives = 21/38 (55%), Gaps = 2/38 (5%)
Frame = +3
Query: 1041 PNKRYTCEQAARHPWIAGDTALS--KNINESVSAQIRK 1148
P R T QA RHPW+ A S KN++ S+S + K
Sbjct: 340 PGARMTALQALRHPWVVSMAASSSMKNLHRSISQNLLK 377
>ref|NP_663596.1| caM kinase-like vesicle-associated protein [Mus musculus].
Length = 512
Score = 232 bits (592), Expect(2) = 9e-68
Identities = 112/236 (47%), Positives = 164/236 (69%), Gaps = 8/236 (3%)
Frame = +1
Query: 352 FSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHENIVALEDIYESPNH 531
F E+ A++K TGKL K K+ + + +NEI +L+ +KH NI+ L D++ +
Sbjct: 35 FCEIFRAKDKTTGKLHTCKKFQKRDGRKVRKAAKNEIGILKMVKHPNILQLVDVFVTRKE 94
Query: 532 LYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLDAVYYLHRMGIVHRDLKPENLLYY 711
++ ++L +G E+FD I+++G+Y+E+D S ++RQVL+AV YLH + IVHR+LK ENL+YY
Sbjct: 95 YFIFLELATGREVFDWILDQGYYSERDTSNVVRQVLEAVAYLHSLKIVHRNLKLENLVYY 154
Query: 712 SQDEESKIMISDFGLSKMEGKGDVMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYI 891
++ + SKI+ISDF L+K+E ++ CGTP Y+APEV+ ++ Y + VDCW+IGVI YI
Sbjct: 155 NRLKNSKIVISDFHLAKLE--NGLIKEPCGTPEYLAPEVVGRQRYGRPVDCWAIGVIMYI 212
Query: 892 LLCGYPPFYDE--------NDSKLFEQILKAEYEFDSPYWDDISDSAKDFIRNLME 1035
LL G PPFY+E +D LF +IL +YEFDSPYWDDIS +AKD + LME
Sbjct: 213 LLSGNPPFYEEVEEDDYENHDKNLFRKILAGDYEFDSPYWDDISQAAKDLVTRLME 268
Score = 43.9 bits (102), Expect(2) = 9e-68
Identities = 19/37 (51%), Positives = 25/37 (67%)
Frame = +3
Query: 1044 NKRYTCEQAARHPWIAGDTALSKNINESVSAQIRKNF 1154
++R T E+A H WI+G+ A KNI + V AQI KNF
Sbjct: 272 DQRITAEEAISHEWISGNAASDKNIKDGVCAQIEKNF 308
>ref|NP_033923.2| calcium/calmodulin-dependent protein kinase type IV [Mus musculus].
Length = 469
Score = 241 bits (616), Expect(2) = 4e-66
Identities = 119/236 (50%), Positives = 164/236 (69%), Gaps = 1/236 (0%)
Frame = +1
Query: 346 GAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHENIVALEDIYESP 525
GA S V ++K T K +A+K + K K + EI VL ++ H NI+ L++I+E+P
Sbjct: 51 GATSIVYRCKQKGTQKPYALKVLKKTVDK---KIVRTEIGVLLRLSHPNIIKLKEIFETP 107
Query: 526 NHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLDAVYYLHRMGIVHRDLKPENLL 705
+ LV++LV+GGELFDRIVEKG+Y+E+DA+ ++Q+L+AV YLH GIVHRDLKPENLL
Sbjct: 108 TEISLVLELVTGGELFDRIVEKGYYSERDAADAVKQILEAVAYLHENGIVHRDLKPENLL 167
Query: 706 YYSQDEESKIMISDFGLSKMEGKGDVMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIA 885
Y + ++ + I+DFGLSK+ +M T CGTPGY APE+L Y VD WS+G+I
Sbjct: 168 YATPAPDAPLKIADFGLSKIVEHQVLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIIT 227
Query: 886 YILLCGYPPFYDE-NDSKLFEQILKAEYEFDSPYWDDISDSAKDFIRNLMEKDPIK 1050
YILLCG+ PFYDE D +F +IL EY F SP+WD++S +AKD ++ L+ DP K
Sbjct: 228 YILLCGFEPFYDERGDQFMFRRILNCEYYFISPWWDEVSLNAKDLVKKLIVLDPKK 283
Score = 29.3 bits (64), Expect(2) = 4e-66
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = +3
Query: 1041 PNKRYTCEQAARHPWIAGDTA 1103
P KR T QA +HPW+ G A
Sbjct: 281 PKKRLTTFQALQHPWVTGKAA 301
>ref|XP_003086850.1| PREDICTED: calcium/calmodulin-dependent protein kinase type I-like,
partial [Mus musculus].
Length = 290
Score = 231 bits (588), Expect(2) = 9e-62
Identities = 118/240 (49%), Positives = 161/240 (67%), Gaps = 5/240 (2%)
Frame = +1
Query: 346 GAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIK--HENIVALEDIYE 519
G++S V TG+ +A K I K+ + G+E + NEIAVL+K+ H+NI+ L D +E
Sbjct: 25 GSYSVVKECVHIDTGRYYAAKVINKRLMAGREHMVRNEIAVLKKVSMGHQNILTLVDYFE 84
Query: 520 SPNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLDAVYYLHRMGIVHRDLKPEN 699
+ N+LYLV L GGELFDRI KG Y E DA+ LIR L AV YLH GIVHRDLKPEN
Sbjct: 85 TMNNLYLVTDLALGGELFDRICRKGSYYESDAADLIRATLSAVAYLHDHGIVHRDLKPEN 144
Query: 700 LLYYSQDEESKIMISDFGLSKM--EGKGDVMSTACGTPGYVAPEVLAQKPYSKAVDCWSI 873
LL+ + ++ + ++I+DFGLS++ E + V++T CGTPGY+APE+ + + K VD W++
Sbjct: 145 LLFRTPEDNADLLIADFGLSRIMDEEQFHVLTTTCGTPGYMAPEIFKKTGHGKPVDIWAL 204
Query: 874 GVIAYILLCGYPPFYDENDSKLFEQILKAEYEFDS-PYWDDISDSAKDFIRNLMEKDPIK 1050
GVI Y LLCGY PF ++D + + IL A+Y F YW +SD+AKDFIR + DP K
Sbjct: 205 GVITYFLLCGYTPFDRDSDFEEMQAILNADYSFTPLEYWRGVSDNAKDFIRRCLTIDPAK 264
Score = 25.4 bits (54), Expect(2) = 9e-62
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = +3
Query: 1041 PNKRYTCEQAARHPWIAG 1094
P KR T +A +HP++AG
Sbjct: 262 PAKRMTAHEALQHPFVAG 279
Database: RefSeq49_MP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 15,617,559
Number of sequences in database: 30,036
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 30036
Number of Hits to DB: 31,635,188
Number of extensions: 847788
Number of successful extensions: 4842
Number of sequences better than 1.0e-05: 642
Number of HSP's gapped: 3717
Number of HSP's successfully gapped: 735
Length of query: 384
Length of database: 15,617,559
Length adjustment: 103
Effective length of query: 281
Effective length of database: 12,523,851
Effective search space: 3519202131
Effective search space used: 3519202131
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to RefSeqHP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-013215
(1154 letters)
Database: RefSeq49_HP.fasta
32,964 sequences; 18,297,164 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_705718.1| calcium/calmodulin-dependent protein kinase typ... 471 e-150
Alignment gi|NP_065130.1| calcium/calmodulin-dependent protein kinase typ... 471 e-150
Alignment gi|NP_003647.1| calcium/calmodulin-dependent protein kinase typ... 412 e-129
Alignment gi|NP_065172.1| calcium/calmodulin-dependent protein kinase typ... 359 e-109
Alignment gi|NP_001034671.3| calcium/calmodulin-dependent protein kinase ... 360 e-109
Alignment gi|NP_001129212.1| calcium/calmodulin-dependent protein kinase ... 360 e-109
Alignment gi|NP_006733.1| serine/threonine-protein kinase H1 [Homo sapien... 252 3e-70
Alignment gi|NP_076951.2| caM kinase-like vesicle-associated protein [Hom... 232 1e-67
Alignment gi|NP_001735.1| calcium/calmodulin-dependent protein kinase typ... 243 2e-66
Alignment gi|NP_149117.1| serine/threonine-protein kinase H2 [Homo sapien... 232 4e-61
>ref|NP_705718.1| calcium/calmodulin-dependent protein kinase type 1D isoform 2 [Homo
sapiens].
Length = 385
Score = 471 bits (1213), Expect(2) = e-150
Identities = 234/235 (99%), Positives = 234/235 (99%)
Frame = +1
Query: 346 GAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHENIVALEDIYESP 525
GAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHENIVALEDIYESP
Sbjct: 32 GAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHENIVALEDIYESP 91
Query: 526 NHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLDAVYYLHRMGIVHRDLKPENLL 705
NHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLDAVYYLHRMGIVHRDLKPENLL
Sbjct: 92 NHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLDAVYYLHRMGIVHRDLKPENLL 151
Query: 706 YYSQDEESKIMISDFGLSKMEGKGDVMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIA 885
YYSQDEESKIMISDFGLSKMEGKGDVMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIA
Sbjct: 152 YYSQDEESKIMISDFGLSKMEGKGDVMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIA 211
Query: 886 YILLCGYPPFYDENDSKLFEQILKAEYEFDSPYWDDISDSAKDFIRNLMEKDPIK 1050
YILLCGYPPFYDENDSKLFEQILKAEYEFDSPYWDDISDSAKDFIRNLMEKDP K
Sbjct: 212 YILLCGYPPFYDENDSKLFEQILKAEYEFDSPYWDDISDSAKDFIRNLMEKDPNK 266
Score = 79.7 bits (195), Expect(2) = e-150
Identities = 36/38 (94%), Positives = 38/38 (100%)
Frame = +3
Query: 1041 PNKRYTCEQAARHPWIAGDTALSKNINESVSAQIRKNF 1154
PNKRYTCEQAARHPWIAGDTAL+KNI+ESVSAQIRKNF
Sbjct: 264 PNKRYTCEQAARHPWIAGDTALNKNIHESVSAQIRKNF 301
>ref|NP_065130.1| calcium/calmodulin-dependent protein kinase type 1D isoform 1 [Homo
sapiens].
Length = 357
Score = 471 bits (1213), Expect(2) = e-150
Identities = 234/235 (99%), Positives = 234/235 (99%)
Frame = +1
Query: 346 GAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHENIVALEDIYESP 525
GAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHENIVALEDIYESP
Sbjct: 32 GAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHENIVALEDIYESP 91
Query: 526 NHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLDAVYYLHRMGIVHRDLKPENLL 705
NHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLDAVYYLHRMGIVHRDLKPENLL
Sbjct: 92 NHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLDAVYYLHRMGIVHRDLKPENLL 151
Query: 706 YYSQDEESKIMISDFGLSKMEGKGDVMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIA 885
YYSQDEESKIMISDFGLSKMEGKGDVMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIA
Sbjct: 152 YYSQDEESKIMISDFGLSKMEGKGDVMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIA 211
Query: 886 YILLCGYPPFYDENDSKLFEQILKAEYEFDSPYWDDISDSAKDFIRNLMEKDPIK 1050
YILLCGYPPFYDENDSKLFEQILKAEYEFDSPYWDDISDSAKDFIRNLMEKDP K
Sbjct: 212 YILLCGYPPFYDENDSKLFEQILKAEYEFDSPYWDDISDSAKDFIRNLMEKDPNK 266
Score = 79.7 bits (195), Expect(2) = e-150
Identities = 36/38 (94%), Positives = 38/38 (100%)
Frame = +3
Query: 1041 PNKRYTCEQAARHPWIAGDTALSKNINESVSAQIRKNF 1154
PNKRYTCEQAARHPWIAGDTAL+KNI+ESVSAQIRKNF
Sbjct: 264 PNKRYTCEQAARHPWIAGDTALNKNIHESVSAQIRKNF 301
>ref|NP_003647.1| calcium/calmodulin-dependent protein kinase type 1 [Homo sapiens].
Length = 370
Score = 412 bits (1059), Expect(2) = e-129
Identities = 203/235 (86%), Positives = 217/235 (92%)
Frame = +1
Query: 346 GAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHENIVALEDIYESP 525
GAFSEV+LAE+K T KL A+KCI K+AL+GKE S+ENEIAVL KIKH NIVAL+DIYES
Sbjct: 29 GAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDIYESG 88
Query: 526 NHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLDAVYYLHRMGIVHRDLKPENLL 705
HLYL+MQLVSGGELFDRIVEKGFYTE+DAS LI QVLDAV YLH +GIVHRDLKPENLL
Sbjct: 89 GHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLL 148
Query: 706 YYSQDEESKIMISDFGLSKMEGKGDVMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIA 885
YYS DE+SKIMISDFGLSKME G V+STACGTPGYVAPEVLAQKPYSKAVDCWSIGVIA
Sbjct: 149 YYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIA 208
Query: 886 YILLCGYPPFYDENDSKLFEQILKAEYEFDSPYWDDISDSAKDFIRNLMEKDPIK 1050
YILLCGYPPFYDEND+KLFEQILKAEYEFDSPYWDDISDSAKDFIR+LMEKDP K
Sbjct: 209 YILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEK 263
Score = 67.8 bits (164), Expect(2) = e-129
Identities = 29/38 (76%), Positives = 34/38 (89%)
Frame = +3
Query: 1041 PNKRYTCEQAARHPWIAGDTALSKNINESVSAQIRKNF 1154
P KR+TCEQA +HPWIAGDTAL KNI++SVS QI+KNF
Sbjct: 261 PEKRFTCEQALQHPWIAGDTALDKNIHQSVSEQIKKNF 298
>ref|NP_065172.1| calcium/calmodulin-dependent protein kinase type 1G [Homo sapiens].
Length = 476
Score = 359 bits (921), Expect(2) = e-109
Identities = 178/233 (76%), Positives = 204/233 (87%)
Frame = +1
Query: 346 GAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHENIVALEDIYESP 525
GAFSEV L +++ TGKLFA+KCI KK+ ++SS+ENEIAVL+KIKHENIV LEDIYES
Sbjct: 32 GAFSEVFLVKQRLTGKLFALKCI-KKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYEST 90
Query: 526 NHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLDAVYYLHRMGIVHRDLKPENLL 705
H YLVMQLVSGGELFDRI+E+G YTEKDAS +I+QVL AV YLH GIVHRDLKPENLL
Sbjct: 91 THYYLVMQLVSGGELFDRILERGVYTEKDASLVIQQVLSAVKYLHENGIVHRDLKPENLL 150
Query: 706 YYSQDEESKIMISDFGLSKMEGKGDVMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIA 885
Y + +E SKIMI+DFGLSKME G +MSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVI
Sbjct: 151 YLTPEENSKIMITDFGLSKMEQNG-IMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIT 209
Query: 886 YILLCGYPPFYDENDSKLFEQILKAEYEFDSPYWDDISDSAKDFIRNLMEKDP 1044
YILLCGYPPFY+E +SKLFE+I + YEF+SP+WDDIS+SAKDFI +L+EKDP
Sbjct: 210 YILLCGYPPFYEETESKLFEKIKEGYYEFESPFWDDISESAKDFICHLLEKDP 262
Score = 57.4 bits (137), Expect(2) = e-109
Identities = 25/38 (65%), Positives = 31/38 (81%)
Frame = +3
Query: 1041 PNKRYTCEQAARHPWIAGDTALSKNINESVSAQIRKNF 1154
PN+RYTCE+A HPWI G+TAL ++I SVS QI+KNF
Sbjct: 262 PNERYTCEKALSHPWIDGNTALHRDIYPSVSLQIQKNF 299
>ref|NP_001034671.3| calcium/calmodulin-dependent protein kinase type 1B isoform a [Homo
sapiens].
Length = 426
Score = 360 bits (923), Expect(2) = e-109
Identities = 171/235 (72%), Positives = 208/235 (88%)
Frame = +1
Query: 346 GAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHENIVALEDIYESP 525
GAFSEVVLA+E+ + L A+KCIPKKAL+GKE+ +ENEIAVLR+I H NIVALED++ESP
Sbjct: 107 GAFSEVVLAQERGSAHLVALKCIPKKALRGKEALVENEIAVLRRISHPNIVALEDVHESP 166
Query: 526 NHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLDAVYYLHRMGIVHRDLKPENLL 705
+HLYL M+LV+GGELFDRI+E+G YTEKDAS L+ QVL AV YLH +GIVHRDLKPENLL
Sbjct: 167 SHLYLAMELVTGGELFDRIMERGSYTEKDASHLVGQVLGAVSYLHSLGIVHRDLKPENLL 226
Query: 706 YYSQDEESKIMISDFGLSKMEGKGDVMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIA 885
Y + E+SKIM+SDFGLSK++ G+++ TACGTPGYVAPE+L QKPY KAVD W++GVI+
Sbjct: 227 YATPFEDSKIMVSDFGLSKIQA-GNMLGTACGTPGYVAPELLEQKPYGKAVDVWALGVIS 285
Query: 886 YILLCGYPPFYDENDSKLFEQILKAEYEFDSPYWDDISDSAKDFIRNLMEKDPIK 1050
YILLCGYPPFYDE+D +LF QIL+A YEFDSP+WDDIS+SAKDFIR+L+E+DP K
Sbjct: 286 YILLCGYPPFYDESDPELFSQILRASYEFDSPFWDDISESAKDFIRHLLERDPQK 340
Score = 56.6 bits (135), Expect(2) = e-109
Identities = 25/38 (65%), Positives = 30/38 (78%)
Frame = +3
Query: 1041 PNKRYTCEQAARHPWIAGDTALSKNINESVSAQIRKNF 1154
P KR+TC+QA RH WI+GDTA ++I SVS QIRKNF
Sbjct: 338 PQKRFTCQQALRHLWISGDTAFDRDILGSVSEQIRKNF 375
>ref|NP_001129212.1| calcium/calmodulin-dependent protein kinase type 1B isoform b [Homo
sapiens].
Length = 360
Score = 360 bits (923), Expect(2) = e-109
Identities = 171/235 (72%), Positives = 208/235 (88%)
Frame = +1
Query: 346 GAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHENIVALEDIYESP 525
GAFSEVVLA+E+ + L A+KCIPKKAL+GKE+ +ENEIAVLR+I H NIVALED++ESP
Sbjct: 41 GAFSEVVLAQERGSAHLVALKCIPKKALRGKEALVENEIAVLRRISHPNIVALEDVHESP 100
Query: 526 NHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLDAVYYLHRMGIVHRDLKPENLL 705
+HLYL M+LV+GGELFDRI+E+G YTEKDAS L+ QVL AV YLH +GIVHRDLKPENLL
Sbjct: 101 SHLYLAMELVTGGELFDRIMERGSYTEKDASHLVGQVLGAVSYLHSLGIVHRDLKPENLL 160
Query: 706 YYSQDEESKIMISDFGLSKMEGKGDVMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIA 885
Y + E+SKIM+SDFGLSK++ G+++ TACGTPGYVAPE+L QKPY KAVD W++GVI+
Sbjct: 161 YATPFEDSKIMVSDFGLSKIQA-GNMLGTACGTPGYVAPELLEQKPYGKAVDVWALGVIS 219
Query: 886 YILLCGYPPFYDENDSKLFEQILKAEYEFDSPYWDDISDSAKDFIRNLMEKDPIK 1050
YILLCGYPPFYDE+D +LF QIL+A YEFDSP+WDDIS+SAKDFIR+L+E+DP K
Sbjct: 220 YILLCGYPPFYDESDPELFSQILRASYEFDSPFWDDISESAKDFIRHLLERDPQK 274
Score = 56.6 bits (135), Expect(2) = e-109
Identities = 25/38 (65%), Positives = 30/38 (78%)
Frame = +3
Query: 1041 PNKRYTCEQAARHPWIAGDTALSKNINESVSAQIRKNF 1154
P KR+TC+QA RH WI+GDTA ++I SVS QIRKNF
Sbjct: 272 PQKRFTCQQALRHLWISGDTAFDRDILGSVSEQIRKNF 309
>ref|NP_006733.1| serine/threonine-protein kinase H1 [Homo sapiens].
Length = 424
Score = 252 bits (643), Expect(2) = 3e-70
Identities = 120/235 (51%), Positives = 170/235 (72%), Gaps = 2/235 (0%)
Frame = +1
Query: 346 GAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHENIVALEDIYESP 525
G+FS VV E +AT + +A+K I K +G+E E+E+ VLR+++H NI+ L +++E+
Sbjct: 107 GSFSRVVRVEHRATRQPYAIKMIETKYREGREVC-ESELRVLRRVRHANIIQLVEVFETQ 165
Query: 526 NHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLDAVYYLHRMGIVHRDLKPENLL 705
+Y+VM+L +GGELFDRI+ KG +TE+DA+ +++ VLD V YLH +GI HRDLKPENLL
Sbjct: 166 ERVYMVMELATGGELFDRIIAKGSFTERDATRVLQMVLDGVRYLHALGITHRDLKPENLL 225
Query: 706 YYSQDEESKIMISDFGLSKMEGKGD--VMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGV 879
YY +SKI+I+DFGL+ KGD +M T CGTP Y+APEVL +KPY+ +VD W++GV
Sbjct: 226 YYHPGTDSKIIITDFGLASARKKGDDCLMKTTCGTPEYIAPEVLVRKPYTNSVDMWALGV 285
Query: 880 IAYILLCGYPPFYDENDSKLFEQILKAEYEFDSPYWDDISDSAKDFIRNLMEKDP 1044
IAYILL G PF D+N ++L+ QIL+ +Y + W +S+ AKDFI L+ DP
Sbjct: 286 IAYILLSGTMPFEDDNRTRLYRQILRGKYSYSGEPWPSVSNLAKDFIDRLLTVDP 340
Score = 32.7 bits (73), Expect(2) = 3e-70
Identities = 16/38 (42%), Positives = 21/38 (55%), Gaps = 2/38 (5%)
Frame = +3
Query: 1041 PNKRYTCEQAARHPWIAGDTALS--KNINESVSAQIRK 1148
P R T QA RHPW+ A S KN++ S+S + K
Sbjct: 340 PGARMTALQALRHPWVVSMAASSSMKNLHRSISQNLLK 377
>ref|NP_076951.2| caM kinase-like vesicle-associated protein [Homo sapiens].
Length = 501
Score = 232 bits (592), Expect(2) = 1e-67
Identities = 112/236 (47%), Positives = 164/236 (69%), Gaps = 8/236 (3%)
Frame = +1
Query: 352 FSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHENIVALEDIYESPNH 531
F E+ A++K TGKL K K+ + + +NEI +L+ +KH NI+ L D++ +
Sbjct: 35 FCEIFRAKDKTTGKLHTCKKFQKRDGRKVRKAAKNEIGILKMVKHPNILQLVDVFVTRKE 94
Query: 532 LYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLDAVYYLHRMGIVHRDLKPENLLYY 711
++ ++L +G E+FD I+++G+Y+E+D S ++RQVL+AV YLH + IVHR+LK ENL+YY
Sbjct: 95 YFIFLELATGREVFDWILDQGYYSERDTSNVVRQVLEAVAYLHSLKIVHRNLKLENLVYY 154
Query: 712 SQDEESKIMISDFGLSKMEGKGDVMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYI 891
++ + SKI+ISDF L+K+E ++ CGTP Y+APEV+ ++ Y + VDCW+IGVI YI
Sbjct: 155 NRLKNSKIVISDFHLAKLE--NGLIKEPCGTPEYLAPEVVGRQRYGRPVDCWAIGVIMYI 212
Query: 892 LLCGYPPFYDE--------NDSKLFEQILKAEYEFDSPYWDDISDSAKDFIRNLME 1035
LL G PPFY+E +D LF +IL +YEFDSPYWDDIS +AKD + LME
Sbjct: 213 LLSGNPPFYEEVEEDDYENHDKNLFRKILAGDYEFDSPYWDDISQAAKDLVTRLME 268
Score = 43.9 bits (102), Expect(2) = 1e-67
Identities = 19/37 (51%), Positives = 25/37 (67%)
Frame = +3
Query: 1044 NKRYTCEQAARHPWIAGDTALSKNINESVSAQIRKNF 1154
++R T E+A H WI+G+ A KNI + V AQI KNF
Sbjct: 272 DQRITAEEAISHEWISGNAASDKNIKDGVCAQIEKNF 308
>ref|NP_001735.1| calcium/calmodulin-dependent protein kinase type IV [Homo sapiens].
Length = 473
Score = 243 bits (619), Expect(2) = 2e-66
Identities = 120/236 (50%), Positives = 164/236 (69%), Gaps = 1/236 (0%)
Frame = +1
Query: 346 GAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHENIVALEDIYESP 525
GA S V ++K T K +A+K + K K + EI VL ++ H NI+ L++I+E+P
Sbjct: 55 GATSIVYRCKQKGTQKPYALKVLKKTVDK---KIVRTEIGVLLRLSHPNIIKLKEIFETP 111
Query: 526 NHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLDAVYYLHRMGIVHRDLKPENLL 705
+ LV++LV+GGELFDRIVEKG+Y+E+DA+ ++Q+L+AV YLH GIVHRDLKPENLL
Sbjct: 112 TEISLVLELVTGGELFDRIVEKGYYSERDAADAVKQILEAVAYLHENGIVHRDLKPENLL 171
Query: 706 YYSQDEESKIMISDFGLSKMEGKGDVMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIA 885
Y + ++ + I+DFGLSK+ +M T CGTPGY APE+L Y VD WS+G+I
Sbjct: 172 YATPAPDAPLKIADFGLSKIVEHQVLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIIT 231
Query: 886 YILLCGYPPFYDE-NDSKLFEQILKAEYEFDSPYWDDISDSAKDFIRNLMEKDPIK 1050
YILLCG+ PFYDE D +F +IL EY F SP+WD++S +AKD +R L+ DP K
Sbjct: 232 YILLCGFEPFYDERGDQFMFRRILNCEYYFISPWWDEVSLNAKDLVRKLIVLDPKK 287
Score = 29.3 bits (64), Expect(2) = 2e-66
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = +3
Query: 1041 PNKRYTCEQAARHPWIAGDTA 1103
P KR T QA +HPW+ G A
Sbjct: 285 PKKRLTTFQALQHPWVTGKAA 305
>ref|NP_149117.1| serine/threonine-protein kinase H2 [Homo sapiens].
Length = 385
Score = 232 bits (592), Expect = 4e-61
Identities = 114/231 (49%), Positives = 164/231 (70%), Gaps = 2/231 (0%)
Frame = +1
Query: 346 GAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHENIVALEDIYESP 525
G+FS VV E+K T K FA+K + + +G+E+ + +E++VLR++ H IV L +I+E+
Sbjct: 72 GSFSRVVRVEQKTTKKPFAIKVMETREREGREACV-SELSVLRRVSHRYIVQLMEIFETE 130
Query: 526 NHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLDAVYYLHRMGIVHRDLKPENLL 705
+ +Y+VM+L +GGELFDR++ +G +TE+DA +++ V D + YLH + I HR+LKPENLL
Sbjct: 131 DQVYMVMELATGGELFDRLIAQGSFTERDAVRILQMVADGIRYLHALQITHRNLKPENLL 190
Query: 706 YYSQDEESKIMISDFGLSKMEGK-GD-VMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGV 879
YY EESKI+I+DFGL+ K GD M T CGTP Y+APEVL +KPY+ AVD W++GV
Sbjct: 191 YYHPGEESKILITDFGLAYSGKKSGDWTMKTLCGTPEYIAPEVLLRKPYTSAVDMWALGV 250
Query: 880 IAYILLCGYPPFYDENDSKLFEQILKAEYEFDSPYWDDISDSAKDFIRNLM 1032
I Y LL G+ PF DE+ ++L+ +ILK +Y + W IS AKDFI L+
Sbjct: 251 ITYALLSGFLPFDDESQTRLYRKILKGKYNYTGEPWPSISHLAKDFIDKLL 301
Database: RefSeq49_HP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,297,164
Number of sequences in database: 32,964
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 32964
Number of Hits to DB: 37,019,664
Number of extensions: 990706
Number of successful extensions: 5820
Number of sequences better than 1.0e-05: 762
Number of HSP's gapped: 4505
Number of HSP's successfully gapped: 863
Length of query: 384
Length of database: 18,297,164
Length adjustment: 104
Effective length of query: 280
Effective length of database: 14,868,908
Effective search space: 4163294240
Effective search space used: 4163294240
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to Sscrofa10_2
BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-013215
(1154 letters)
Database: Sscrofa_10.2.fasta
4582 sequences; 2,808,509,378 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|GL892980.2| Sus scrofa unplaced genomic scaffold ChrUScaf865 276 3e-71
Sscrofa_Chr10 276 3e-71
gb|GL893927.2| Sus scrofa unplaced genomic scaffold ChrUScaf1812 176 2e-41
Sscrofa_Chr13 70 3e-09
>gb|GL892980.2| Sus scrofa unplaced genomic scaffold ChrUScaf865
Length = 84408
Score = 276 bits (139), Expect = 3e-71
Identities = 139/139 (100%)
Strand = Plus / Minus
Query: 552 cgtatctggtggagagctgtttgaccggatagtggagaagggattttacacagagaaaga 611
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 59819 cgtatctggtggagagctgtttgaccggatagtggagaagggattttacacagagaaaga 59760
Query: 612 tgccagcactctgatccgccaggtcttggatgccgtctactatctgcacagaatgggcat 671
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 59759 tgccagcactctgatccgccaggtcttggatgccgtctactatctgcacagaatgggcat 59700
Query: 672 cgtccacagggacctcaag 690
|||||||||||||||||||
Sbjct: 59699 cgtccacagggacctcaag 59681
Score = 224 bits (113), Expect = 8e-56
Identities = 113/113 (100%)
Strand = Plus / Minus
Query: 894 gctctgcggctaccctcctttctacgacgaaaatgactccaagctcttcgagcagatcct 953
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20665 gctctgcggctaccctcctttctacgacgaaaatgactccaagctcttcgagcagatcct 20606
Query: 954 caaggcggagtatgagttcgactctccctactgggatgacatctctgactctg 1006
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20605 caaggcggagtatgagttcgactctccctactgggatgacatctctgactctg 20553
Score = 159 bits (80), Expect = 4e-36
Identities = 80/80 (100%)
Strand = Plus / Minus
Query: 689 agcccgaaaacctgttgtactacagtcaagatgaggagtccaaaataatgatcagtgact 748
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 53378 agcccgaaaacctgttgtactacagtcaagatgaggagtccaaaataatgatcagtgact 53319
Query: 749 ttggactgtccaaaatggaa 768
||||||||||||||||||||
Sbjct: 53318 ttggactgtccaaaatggaa 53299
Score = 155 bits (78), Expect = 6e-35
Identities = 78/78 (100%)
Strand = Plus / Minus
Query: 817 gctcccgaggtcctcgcccagaaaccctacagcaaagctgtcgactgctggtccattggg 876
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 37343 gctcccgaggtcctcgcccagaaaccctacagcaaagctgtcgactgctggtccattggg 37284
Query: 877 gtgattgcctatatcttg 894
||||||||||||||||||
Sbjct: 37283 gtgattgcctatatcttg 37266
Score = 145 bits (73), Expect = 6e-32
Identities = 80/81 (98%), Gaps = 1/81 (1%)
Strand = Plus / Minus
Query: 1006 gcaaaagacttcattcggaacctgatggagaaagacccaa-taaaagatacacatgtgag 1064
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 18775 gcaaaagacttcattcggaacctgatggagaaagacccaaataaaagatacacatgtgag 18716
Query: 1065 caggcagctcggcacccatgg 1085
|||||||||||||||||||||
Sbjct: 18715 caggcagctcggcacccatgg 18695
>Sscrofa_Chr10
|| Length = 79102373
Score = 276 bits (139), Expect = 3e-71
Identities = 139/139 (100%)
Strand = Plus / Minus
Query: 552 cgtatctggtggagagctgtttgaccggatagtggagaagggattttacacagagaaaga 611
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 64969603 cgtatctggtggagagctgtttgaccggatagtggagaagggattttacacagagaaaga 64969544
Query: 612 tgccagcactctgatccgccaggtcttggatgccgtctactatctgcacagaatgggcat 671
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 64969543 tgccagcactctgatccgccaggtcttggatgccgtctactatctgcacagaatgggcat 64969484
Query: 672 cgtccacagggacctcaag 690
|||||||||||||||||||
Sbjct: 64969483 cgtccacagggacctcaag 64969465
Score = 256 bits (129), Expect = 2e-65
Identities = 129/129 (100%)
Strand = Plus / Minus
Query: 689 agcccgaaaacctgttgtactacagtcaagatgaggagtccaaaataatgatcagtgact 748
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 64962926 agcccgaaaacctgttgtactacagtcaagatgaggagtccaaaataatgatcagtgact 64962867
Query: 749 ttggactgtccaaaatggaaggcaaaggagacgtgatgtccacagcctgtgggaccccag 808
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 64962866 ttggactgtccaaaatggaaggcaaaggagacgtgatgtccacagcctgtgggaccccag 64962807
Query: 809 gctacgtcg 817
|||||||||
Sbjct: 64962806 gctacgtcg 64962798
Score = 256 bits (129), Expect = 2e-65
Identities = 132/133 (99%)
Strand = Plus / Plus
Query: 345 cggggcgttttctgaagtggtcttagcggaagagaaggcaactggaaaactgtttgcggt 404
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 65034439 cggggcgttttctgaagtggtcttagcggaagagaaggcaactggaaaactgtttgcggt 65034498
Query: 405 gaagtgtatccccaagaaggcgctgaagggcaaagaaagcagcatagagaatgagatagc 464
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 65034499 gaagtgtatccccaagaaggcgctgaagggcaaagaaagcagcatagagaatgagatagc 65034558
Query: 465 cgtcctaagaaag 477
|||||| ||||||
Sbjct: 65034559 cgtcctgagaaag 65034571
Score = 224 bits (113), Expect = 8e-56
Identities = 113/113 (100%)
Strand = Plus / Minus
Query: 894 gctctgcggctaccctcctttctacgacgaaaatgactccaagctcttcgagcagatcct 953
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 64925912 gctctgcggctaccctcctttctacgacgaaaatgactccaagctcttcgagcagatcct 64925853
Query: 954 caaggcggagtatgagttcgactctccctactgggatgacatctctgactctg 1006
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 64925852 caaggcggagtatgagttcgactctccctactgggatgacatctctgactctg 64925800
Score = 176 bits (89), Expect = 2e-41
Identities = 92/93 (98%)
Strand = Plus / Minus
Query: 252 ctacatcaaacagagcgtcgagtttagtctcatacatgtagcaaactgtgctggtacaaa 311
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 65363694 ctacatcaaacagagcgtcgagtttagtctcatacatgtagcaaactgtgctggtacaaa 65363635
Query: 312 agcagaccattgctctcatgctccttgactgca 344
|||||| ||||||||||||||||||||||||||
Sbjct: 65363634 agcagatcattgctctcatgctccttgactgca 65363602
Score = 155 bits (78), Expect = 6e-35
Identities = 78/78 (100%)
Strand = Plus / Minus
Query: 817 gctcccgaggtcctcgcccagaaaccctacagcaaagctgtcgactgctggtccattggg 876
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 64942750 gctcccgaggtcctcgcccagaaaccctacagcaaagctgtcgactgctggtccattggg 64942691
Query: 877 gtgattgcctatatcttg 894
||||||||||||||||||
Sbjct: 64942690 gtgattgcctatatcttg 64942673
Score = 149 bits (75), Expect = 4e-33
Identities = 75/75 (100%)
Strand = Plus / Plus
Query: 477 gattaagcatgaaaacattgtggccctggaagacatttatgaaagcccgaatcacttgta 536
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 65129976 gattaagcatgaaaacattgtggccctggaagacatttatgaaagcccgaatcacttgta 65130035
Query: 537 cttggtcatgcagct 551
|||||||||||||||
Sbjct: 65130036 cttggtcatgcagct 65130050
Score = 145 bits (73), Expect = 6e-32
Identities = 80/81 (98%), Gaps = 1/81 (1%)
Strand = Plus / Minus
Query: 1006 gcaaaagacttcattcggaacctgatggagaaagacccaa-taaaagatacacatgtgag 1064
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 64924102 gcaaaagacttcattcggaacctgatggagaaagacccaaataaaagatacacatgtgag 64924043
Query: 1065 caggcagctcggcacccatgg 1085
|||||||||||||||||||||
Sbjct: 64924042 caggcagctcggcacccatgg 64924022
Score = 133 bits (67), Expect = 2e-28
Identities = 70/71 (98%)
Strand = Plus / Minus
Query: 1084 ggatcgccggtgacacagcccttagcaaaaacatcaacgagtccgtcagcgcccagatcc 1143
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 64916985 ggatcgccggtgacacagcccttagcaaaaacatccacgagtccgtcagcgcccagatcc 64916926
Query: 1144 ggaagaacttc 1154
|||||||||||
Sbjct: 64916925 ggaagaacttc 64916915
>gb|GL893927.2| Sus scrofa unplaced genomic scaffold ChrUScaf1812
Length = 30352
Score = 176 bits (89), Expect = 2e-41
Identities = 92/93 (98%)
Strand = Plus / Minus
Query: 252 ctacatcaaacagagcgtcgagtttagtctcatacatgtagcaaactgtgctggtacaaa 311
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7849 ctacatcaaacagagcgtcgagtttagtctcatacatgtagcaaactgtgctggtacaaa 7790
Query: 312 agcagaccattgctctcatgctccttgactgca 344
|||||| ||||||||||||||||||||||||||
Sbjct: 7789 agcagatcattgctctcatgctccttgactgca 7757
>Sscrofa_Chr13
|| Length = 218635234
Score = 69.9 bits (35), Expect = 3e-09
Identities = 92/111 (82%)
Strand = Plus / Plus
Query: 894 gctctgcggctaccctcctttctacgacgaaaatgactccaagctcttcgagcagatcct 953
|||||| || ||||| || ||||| ||||| ||||| |||| ||||| || ||||| |
Sbjct: 73099968 gctctgtggttacccccccttctatgacgagaatgatgccaaactctttgaacagatttt 73100027
Query: 954 caaggcggagtatgagttcgactctccctactgggatgacatctctgactc 1004
||||| ||||| ||||| |||||||| |||||||| ||||||||||||||
Sbjct: 73100028 gaaggccgagtacgagtttgactctccttactgggacgacatctctgactc 73100078
Database: Sscrofa_10.2.fasta
Posted date: Nov 16, 2011 10:34 AM
Number of letters in database: 2,808,509,378
Number of sequences in database: 4582
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4582
Number of Hits to DB: 25,212,572
Number of extensions: 195
Number of successful extensions: 195
Number of sequences better than 1.0e-05: 4
Number of HSP's gapped: 193
Number of HSP's successfully gapped: 16
Length of query: 1154
Length of database: 2,808,509,378
Length adjustment: 21
Effective length of query: 1133
Effective length of database: 2,808,413,156
Effective search space: 3181932105748
Effective search space used: 3181932105748
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 18 (36.2 bits)
S2: 30 (60.0 bits)