Search to RefSeqCP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-013265
(1683 letters)
Database: RefSeq49_CP.fasta
33,336 sequences; 18,874,504 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_860471.1| PREDICTED: similar to Glycerol kinase (ATP:glyc... 963 0.0
Alignment gi|XP_860403.1| PREDICTED: similar to Glycerol kinase (ATP:glyc... 963 0.0
Alignment gi|XP_860266.1| PREDICTED: similar to glycerol kinase isoform 2... 963 0.0
Alignment gi|XP_850009.1| PREDICTED: similar to glycerol kinase isoform 2... 957 0.0
Alignment gi|XP_535625.2| PREDICTED: similar to glycerol kinase 2 [Canis ... 846 0.0
Alignment gi|XP_537989.2| PREDICTED: similar to glycerol kinase isoform 2... 697 0.0
Alignment gi|XP_860333.1| PREDICTED: similar to glycerol kinase isoform 2... 690 0.0
Alignment gi|XP_542815.2| PREDICTED: similar to CG1271-PA, isoform A [Can... 241 1e-63
Alignment gi|XP_860305.1| PREDICTED: similar to glycerol kinase isoform 2... 148 2e-35
Alignment gi|XP_860227.1| PREDICTED: similar to Glycerol kinase isoform 3... 98 3e-20
>ref|XP_860471.1| PREDICTED: similar to Glycerol kinase (ATP:glycerol
3-phosphotransferase) (Glycerokinase) (GK) isoform 8
[Canis familiaris].
Length = 524
Score = 963 bits (2490), Expect = 0.0
Identities = 474/515 (92%), Positives = 488/515 (94%)
Frame = +1
Query: 139 MAAANKAVLGPLVGAVDQGTSSTRFLVFNSKTAELLSHHQVELKQEFPKEGWVEQDPKEI 318
MAAA KAVLGPLVGAVDQGTSSTRFLVFNS+TAELLSHHQVE+KQEFP+EGWVEQDPKEI
Sbjct: 1 MAAAKKAVLGPLVGAVDQGTSSTRFLVFNSRTAELLSHHQVEIKQEFPREGWVEQDPKEI 60
Query: 319 LNSVYECIEKTCEKLGQLNIDISNIKAIGVSNQRETTVVWDKLTGEPLYNAVVWLDLRTQ 498
L SVYECIEKTCEKLGQLNIDISNIKAIGVSNQRETTVVWDKLTGEPLYNAVVWLDLRTQ
Sbjct: 61 LQSVYECIEKTCEKLGQLNIDISNIKAIGVSNQRETTVVWDKLTGEPLYNAVVWLDLRTQ 120
Query: 499 STVENLSKRIPGNNNFVKSKTGLPLSTYFSAVKLRWLLDNVRKVQKAVEEERALFGTVDS 678
STVENLSKRIPGNNNFVKSKTGLPLSTYFSAVKLRWLLDNVRKVQKAVEE+RALFGT+DS
Sbjct: 121 STVENLSKRIPGNNNFVKSKTGLPLSTYFSAVKLRWLLDNVRKVQKAVEEDRALFGTIDS 180
Query: 679 WLIWCLTGGANGGVHCTDVTNASRTMLFNIHSLEWDKELCEFFEIPMKILPNVRSSSEIY 858
WLIW LTGGANGGVHCTDVTNASRTMLFNIHSLEWDKELCEFFEIPMKILPNVRSSSEIY
Sbjct: 181 WLIWSLTGGANGGVHCTDVTNASRTMLFNIHSLEWDKELCEFFEIPMKILPNVRSSSEIY 240
Query: 859 GLMKAGALEGVPISGCLGDQSAALVGQMCFQDGQAKNTYGTGCFLLCNTGRKCVFSEHGL 1038
GLMKAGALEGVPISGCLGDQSAALVGQMCFQDG+AKNTYGTGCFLLCNTGRKCVFSEHGL
Sbjct: 241 GLMKAGALEGVPISGCLGDQSAALVGQMCFQDGEAKNTYGTGCFLLCNTGRKCVFSEHGL 300
Query: 1039 LTTVAYKLGRDKPVYYALEGSVAIAGAVVRWLRDNLGIIKTSEEIEKLAKEVGTSYGCYF 1218
LTTVAYKLGRDKPVYYALEGSVAIAGAV+RWLRDNLGIIKTSEEIEKLAKEVGTSYGCYF
Sbjct: 301 LTTVAYKLGRDKPVYYALEGSVAIAGAVIRWLRDNLGIIKTSEEIEKLAKEVGTSYGCYF 360
Query: 1219 VPAFSGLYAPYWEPSARGIICGLTQFTNRCHIAFAALEAVCFQTREILDAMNRDCGMPLR 1398
VPAFSGLYAPYWEPSARGIICGLTQFTN+CHIAFAALEAVCFQTREILDAMNRDCG+PL
Sbjct: 361 VPAFSGLYAPYWEPSARGIICGLTQFTNKCHIAFAALEAVCFQTREILDAMNRDCGIPLS 420
Query: 1399 HLXVDGGMTNNKILMQLQADILYIPVVKPSMPXNTXXXXXXXXXXXEXVGVWSLDP*XLS 1578
HL VDGGMTNNKILMQLQADILYIPVVKPSMP T E VGVWSL+P LS
Sbjct: 421 HLQVDGGMTNNKILMQLQADILYIPVVKPSMPETTALGAAMAAGAAEGVGVWSLEPEDLS 480
Query: 1579 AVTVERFEPSDHAEESEIRXSTXKKALMXSMGWXT 1683
AVT+ERFEP +AEESEIR ST KKA+M S+GW T
Sbjct: 481 AVTMERFEPQINAEESEIRYSTWKKAVMKSVGWVT 515
>ref|XP_860403.1| PREDICTED: similar to Glycerol kinase (ATP:glycerol
3-phosphotransferase) (Glycerokinase) (GK) isoform 7
[Canis familiaris].
Length = 533
Score = 963 bits (2490), Expect = 0.0
Identities = 474/515 (92%), Positives = 488/515 (94%)
Frame = +1
Query: 139 MAAANKAVLGPLVGAVDQGTSSTRFLVFNSKTAELLSHHQVELKQEFPKEGWVEQDPKEI 318
MAAA KAVLGPLVGAVDQGTSSTRFLVFNS+TAELLSHHQVE+KQEFP+EGWVEQDPKEI
Sbjct: 1 MAAAKKAVLGPLVGAVDQGTSSTRFLVFNSRTAELLSHHQVEIKQEFPREGWVEQDPKEI 60
Query: 319 LNSVYECIEKTCEKLGQLNIDISNIKAIGVSNQRETTVVWDKLTGEPLYNAVVWLDLRTQ 498
L SVYECIEKTCEKLGQLNIDISNIKAIGVSNQRETTVVWDKLTGEPLYNAVVWLDLRTQ
Sbjct: 61 LQSVYECIEKTCEKLGQLNIDISNIKAIGVSNQRETTVVWDKLTGEPLYNAVVWLDLRTQ 120
Query: 499 STVENLSKRIPGNNNFVKSKTGLPLSTYFSAVKLRWLLDNVRKVQKAVEEERALFGTVDS 678
STVENLSKRIPGNNNFVKSKTGLPLSTYFSAVKLRWLLDNVRKVQKAVEE+RALFGT+DS
Sbjct: 121 STVENLSKRIPGNNNFVKSKTGLPLSTYFSAVKLRWLLDNVRKVQKAVEEDRALFGTIDS 180
Query: 679 WLIWCLTGGANGGVHCTDVTNASRTMLFNIHSLEWDKELCEFFEIPMKILPNVRSSSEIY 858
WLIW LTGGANGGVHCTDVTNASRTMLFNIHSLEWDKELCEFFEIPMKILPNVRSSSEIY
Sbjct: 181 WLIWSLTGGANGGVHCTDVTNASRTMLFNIHSLEWDKELCEFFEIPMKILPNVRSSSEIY 240
Query: 859 GLMKAGALEGVPISGCLGDQSAALVGQMCFQDGQAKNTYGTGCFLLCNTGRKCVFSEHGL 1038
GLMKAGALEGVPISGCLGDQSAALVGQMCFQDG+AKNTYGTGCFLLCNTGRKCVFSEHGL
Sbjct: 241 GLMKAGALEGVPISGCLGDQSAALVGQMCFQDGEAKNTYGTGCFLLCNTGRKCVFSEHGL 300
Query: 1039 LTTVAYKLGRDKPVYYALEGSVAIAGAVVRWLRDNLGIIKTSEEIEKLAKEVGTSYGCYF 1218
LTTVAYKLGRDKPVYYALEGSVAIAGAV+RWLRDNLGIIKTSEEIEKLAKEVGTSYGCYF
Sbjct: 301 LTTVAYKLGRDKPVYYALEGSVAIAGAVIRWLRDNLGIIKTSEEIEKLAKEVGTSYGCYF 360
Query: 1219 VPAFSGLYAPYWEPSARGIICGLTQFTNRCHIAFAALEAVCFQTREILDAMNRDCGMPLR 1398
VPAFSGLYAPYWEPSARGIICGLTQFTN+CHIAFAALEAVCFQTREILDAMNRDCG+PL
Sbjct: 361 VPAFSGLYAPYWEPSARGIICGLTQFTNKCHIAFAALEAVCFQTREILDAMNRDCGIPLS 420
Query: 1399 HLXVDGGMTNNKILMQLQADILYIPVVKPSMPXNTXXXXXXXXXXXEXVGVWSLDP*XLS 1578
HL VDGGMTNNKILMQLQADILYIPVVKPSMP T E VGVWSL+P LS
Sbjct: 421 HLQVDGGMTNNKILMQLQADILYIPVVKPSMPETTALGAAMAAGAAEGVGVWSLEPEDLS 480
Query: 1579 AVTVERFEPSDHAEESEIRXSTXKKALMXSMGWXT 1683
AVT+ERFEP +AEESEIR ST KKA+M S+GW T
Sbjct: 481 AVTMERFEPQINAEESEIRYSTWKKAVMKSVGWVT 515
>ref|XP_860266.1| PREDICTED: similar to glycerol kinase isoform 2 isoform 4 [Canis
familiaris].
Length = 553
Score = 963 bits (2490), Expect = 0.0
Identities = 474/515 (92%), Positives = 488/515 (94%)
Frame = +1
Query: 139 MAAANKAVLGPLVGAVDQGTSSTRFLVFNSKTAELLSHHQVELKQEFPKEGWVEQDPKEI 318
MAAA KAVLGPLVGAVDQGTSSTRFLVFNS+TAELLSHHQVE+KQEFP+EGWVEQDPKEI
Sbjct: 1 MAAAKKAVLGPLVGAVDQGTSSTRFLVFNSRTAELLSHHQVEIKQEFPREGWVEQDPKEI 60
Query: 319 LNSVYECIEKTCEKLGQLNIDISNIKAIGVSNQRETTVVWDKLTGEPLYNAVVWLDLRTQ 498
L SVYECIEKTCEKLGQLNIDISNIKAIGVSNQRETTVVWDKLTGEPLYNAVVWLDLRTQ
Sbjct: 61 LQSVYECIEKTCEKLGQLNIDISNIKAIGVSNQRETTVVWDKLTGEPLYNAVVWLDLRTQ 120
Query: 499 STVENLSKRIPGNNNFVKSKTGLPLSTYFSAVKLRWLLDNVRKVQKAVEEERALFGTVDS 678
STVENLSKRIPGNNNFVKSKTGLPLSTYFSAVKLRWLLDNVRKVQKAVEE+RALFGT+DS
Sbjct: 121 STVENLSKRIPGNNNFVKSKTGLPLSTYFSAVKLRWLLDNVRKVQKAVEEDRALFGTIDS 180
Query: 679 WLIWCLTGGANGGVHCTDVTNASRTMLFNIHSLEWDKELCEFFEIPMKILPNVRSSSEIY 858
WLIW LTGGANGGVHCTDVTNASRTMLFNIHSLEWDKELCEFFEIPMKILPNVRSSSEIY
Sbjct: 181 WLIWSLTGGANGGVHCTDVTNASRTMLFNIHSLEWDKELCEFFEIPMKILPNVRSSSEIY 240
Query: 859 GLMKAGALEGVPISGCLGDQSAALVGQMCFQDGQAKNTYGTGCFLLCNTGRKCVFSEHGL 1038
GLMKAGALEGVPISGCLGDQSAALVGQMCFQDG+AKNTYGTGCFLLCNTGRKCVFSEHGL
Sbjct: 241 GLMKAGALEGVPISGCLGDQSAALVGQMCFQDGEAKNTYGTGCFLLCNTGRKCVFSEHGL 300
Query: 1039 LTTVAYKLGRDKPVYYALEGSVAIAGAVVRWLRDNLGIIKTSEEIEKLAKEVGTSYGCYF 1218
LTTVAYKLGRDKPVYYALEGSVAIAGAV+RWLRDNLGIIKTSEEIEKLAKEVGTSYGCYF
Sbjct: 301 LTTVAYKLGRDKPVYYALEGSVAIAGAVIRWLRDNLGIIKTSEEIEKLAKEVGTSYGCYF 360
Query: 1219 VPAFSGLYAPYWEPSARGIICGLTQFTNRCHIAFAALEAVCFQTREILDAMNRDCGMPLR 1398
VPAFSGLYAPYWEPSARGIICGLTQFTN+CHIAFAALEAVCFQTREILDAMNRDCG+PL
Sbjct: 361 VPAFSGLYAPYWEPSARGIICGLTQFTNKCHIAFAALEAVCFQTREILDAMNRDCGIPLS 420
Query: 1399 HLXVDGGMTNNKILMQLQADILYIPVVKPSMPXNTXXXXXXXXXXXEXVGVWSLDP*XLS 1578
HL VDGGMTNNKILMQLQADILYIPVVKPSMP T E VGVWSL+P LS
Sbjct: 421 HLQVDGGMTNNKILMQLQADILYIPVVKPSMPETTALGAAMAAGAAEGVGVWSLEPEDLS 480
Query: 1579 AVTVERFEPSDHAEESEIRXSTXKKALMXSMGWXT 1683
AVT+ERFEP +AEESEIR ST KKA+M S+GW T
Sbjct: 481 AVTMERFEPQINAEESEIRYSTWKKAVMKSVGWVT 515
>ref|XP_850009.1| PREDICTED: similar to glycerol kinase isoform 2 isoform 2 [Canis
familiaris].
Length = 559
Score = 957 bits (2473), Expect = 0.0
Identities = 474/521 (90%), Positives = 488/521 (93%), Gaps = 6/521 (1%)
Frame = +1
Query: 139 MAAANKAVLGPLVGAVDQGTSSTRFLVFNSKTAELLSHHQVELKQEFPKEGWVEQDPKEI 318
MAAA KAVLGPLVGAVDQGTSSTRFLVFNS+TAELLSHHQVE+KQEFP+EGWVEQDPKEI
Sbjct: 1 MAAAKKAVLGPLVGAVDQGTSSTRFLVFNSRTAELLSHHQVEIKQEFPREGWVEQDPKEI 60
Query: 319 LNSVYECIEKTCEKLGQLNIDISNIKAIGVSNQRETTVVWDKLTGEPLYNAVVWLDLRTQ 498
L SVYECIEKTCEKLGQLNIDISNIKAIGVSNQRETTVVWDKLTGEPLYNAVVWLDLRTQ
Sbjct: 61 LQSVYECIEKTCEKLGQLNIDISNIKAIGVSNQRETTVVWDKLTGEPLYNAVVWLDLRTQ 120
Query: 499 STVENLSKRIPGNNNFVKSKTGLPLSTYFSAVKLRWLLDNVRKVQKAVEEERALFGTVDS 678
STVENLSKRIPGNNNFVKSKTGLPLSTYFSAVKLRWLLDNVRKVQKAVEE+RALFGT+DS
Sbjct: 121 STVENLSKRIPGNNNFVKSKTGLPLSTYFSAVKLRWLLDNVRKVQKAVEEDRALFGTIDS 180
Query: 679 WLIWCLTGGANGGVHCTDVTNASRTMLFNIHSLEWDKELCEFFEIPMKILPNVRSSSEIY 858
WLIW LTGGANGGVHCTDVTNASRTMLFNIHSLEWDKELCEFFEIPMKILPNVRSSSEIY
Sbjct: 181 WLIWSLTGGANGGVHCTDVTNASRTMLFNIHSLEWDKELCEFFEIPMKILPNVRSSSEIY 240
Query: 859 GLMK------AGALEGVPISGCLGDQSAALVGQMCFQDGQAKNTYGTGCFLLCNTGRKCV 1020
GLMK AGALEGVPISGCLGDQSAALVGQMCFQDG+AKNTYGTGCFLLCNTGRKCV
Sbjct: 241 GLMKISHSLKAGALEGVPISGCLGDQSAALVGQMCFQDGEAKNTYGTGCFLLCNTGRKCV 300
Query: 1021 FSEHGLLTTVAYKLGRDKPVYYALEGSVAIAGAVVRWLRDNLGIIKTSEEIEKLAKEVGT 1200
FSEHGLLTTVAYKLGRDKPVYYALEGSVAIAGAV+RWLRDNLGIIKTSEEIEKLAKEVGT
Sbjct: 301 FSEHGLLTTVAYKLGRDKPVYYALEGSVAIAGAVIRWLRDNLGIIKTSEEIEKLAKEVGT 360
Query: 1201 SYGCYFVPAFSGLYAPYWEPSARGIICGLTQFTNRCHIAFAALEAVCFQTREILDAMNRD 1380
SYGCYFVPAFSGLYAPYWEPSARGIICGLTQFTN+CHIAFAALEAVCFQTREILDAMNRD
Sbjct: 361 SYGCYFVPAFSGLYAPYWEPSARGIICGLTQFTNKCHIAFAALEAVCFQTREILDAMNRD 420
Query: 1381 CGMPLRHLXVDGGMTNNKILMQLQADILYIPVVKPSMPXNTXXXXXXXXXXXEXVGVWSL 1560
CG+PL HL VDGGMTNNKILMQLQADILYIPVVKPSMP T E VGVWSL
Sbjct: 421 CGIPLSHLQVDGGMTNNKILMQLQADILYIPVVKPSMPETTALGAAMAAGAAEGVGVWSL 480
Query: 1561 DP*XLSAVTVERFEPSDHAEESEIRXSTXKKALMXSMGWXT 1683
+P LSAVT+ERFEP +AEESEIR ST KKA+M S+GW T
Sbjct: 481 EPEDLSAVTMERFEPQINAEESEIRYSTWKKAVMKSVGWVT 521
>ref|XP_535625.2| PREDICTED: similar to glycerol kinase 2 [Canis familiaris].
Length = 586
Score = 846 bits (2186), Expect = 0.0
Identities = 412/521 (79%), Positives = 456/521 (87%)
Frame = +1
Query: 121 RPQAGFMAAANKAVLGPLVGAVDQGTSSTRFLVFNSKTAELLSHHQVELKQEFPKEGWVE 300
+P G+MAA K V+GPLVGAV QGT+STRFLVF+SKTA+LLSHHQVEL ++FP+E WVE
Sbjct: 27 QPLTGYMAAPKKTVVGPLVGAVVQGTNSTRFLVFSSKTADLLSHHQVELTEDFPREEWVE 86
Query: 301 QDPKEILNSVYECIEKTCEKLGQLNIDISNIKAIGVSNQRETTVVWDKLTGEPLYNAVVW 480
QDPKEIL SVYECIE+TC+KL +L+I++SNIKA GVSNQRETTV+WDKLTGEP YNA+VW
Sbjct: 87 QDPKEILQSVYECIERTCQKLAELHIEVSNIKATGVSNQRETTVIWDKLTGEPFYNAIVW 146
Query: 481 LDLRTQSTVENLSKRIPGNNNFVKSKTGLPLSTYFSAVKLRWLLDNVRKVQKAVEEERAL 660
LDLRTQ T+ENLSK+IPGNNNFVKS+TGLPLSTYFSAVKLRW+LDNVR+VQKAVEE RAL
Sbjct: 147 LDLRTQPTLENLSKKIPGNNNFVKSETGLPLSTYFSAVKLRWILDNVRQVQKAVEEGRAL 206
Query: 661 FGTVDSWLIWCLTGGANGGVHCTDVTNASRTMLFNIHSLEWDKELCEFFEIPMKILPNVR 840
GT+DSWLIW +TGG NGGVHCTDVTNASRTML NIHSLEWDKELC+FF+IPM IL NV
Sbjct: 207 LGTIDSWLIWSVTGGVNGGVHCTDVTNASRTMLSNIHSLEWDKELCDFFDIPMDILRNVW 266
Query: 841 SSSEIYGLMKAGALEGVPISGCLGDQSAALVGQMCFQDGQAKNTYGTGCFLLCNTGRKCV 1020
SSS+IYG +KAG+LEG PISGCLGDQSAALVGQMCFQ+GQAKNTY TG FLLCNTG KCV
Sbjct: 267 SSSDIYGRIKAGSLEGEPISGCLGDQSAALVGQMCFQEGQAKNTYSTGRFLLCNTGHKCV 326
Query: 1021 FSEHGLLTTVAYKLGRDKPVYYALEGSVAIAGAVVRWLRDNLGIIKTSEEIEKLAKEVGT 1200
FS HGLLTTVAYK GRDKPV YALEGSV IAGAV+RWLRDNLGII TSEEIE LAK+VGT
Sbjct: 327 FSAHGLLTTVAYKPGRDKPVCYALEGSVGIAGAVIRWLRDNLGIINTSEEIETLAKDVGT 386
Query: 1201 SYGCYFVPAFSGLYAPYWEPSARGIICGLTQFTNRCHIAFAALEAVCFQTREILDAMNRD 1380
SYGCYFVPAFSGLYAP+WEPSARGIICGL+QFT++ HIAFAALE+VCFQTREILDAMN D
Sbjct: 387 SYGCYFVPAFSGLYAPFWEPSARGIICGLSQFTSKNHIAFAALESVCFQTREILDAMNYD 446
Query: 1381 CGMPLRHLXVDGGMTNNKILMQLQADILYIPVVKPSMPXNTXXXXXXXXXXXEXVGVWSL 1560
CG+PL HL VDG MTNN+ILMQLQADIL+IPV+KPSMP T E VGVWSL
Sbjct: 447 CGIPLSHLQVDGAMTNNRILMQLQADILHIPVIKPSMPETTALGAAMAAGAAEGVGVWSL 506
Query: 1561 DP*XLSAVTVERFEPSDHAEESEIRXSTXKKALMXSMGWXT 1683
P LS + +ERFEP A ESEIR ST KKA+ SMGW T
Sbjct: 507 KPEDLSVIFMERFEPQIKATESEIRYSTWKKAVRKSMGWVT 547
>ref|XP_537989.2| PREDICTED: similar to glycerol kinase isoform 2 isoform 1 [Canis
familiaris].
Length = 418
Score = 697 bits (1798), Expect = 0.0
Identities = 341/377 (90%), Positives = 352/377 (93%)
Frame = +1
Query: 553 SKTGLPLSTYFSAVKLRWLLDNVRKVQKAVEEERALFGTVDSWLIWCLTGGANGGVHCTD 732
SKTGLPLSTYFSAVKLRWLLDNVRKVQKAVEE+RALFGT+DSWLIW LTGGANGGVHCTD
Sbjct: 4 SKTGLPLSTYFSAVKLRWLLDNVRKVQKAVEEDRALFGTIDSWLIWSLTGGANGGVHCTD 63
Query: 733 VTNASRTMLFNIHSLEWDKELCEFFEIPMKILPNVRSSSEIYGLMKAGALEGVPISGCLG 912
VTNASRTMLFNIHSLEWDKELCEFFEIPMKILPNVRSSSEIYGLMKAGALEGVPISGCLG
Sbjct: 64 VTNASRTMLFNIHSLEWDKELCEFFEIPMKILPNVRSSSEIYGLMKAGALEGVPISGCLG 123
Query: 913 DQSAALVGQMCFQDGQAKNTYGTGCFLLCNTGRKCVFSEHGLLTTVAYKLGRDKPVYYAL 1092
DQSAALVGQMCFQDG+AKNTYGTGCFLLCNTGRKCVFSEHGLLTTVAYKLGRDKPVYYAL
Sbjct: 124 DQSAALVGQMCFQDGEAKNTYGTGCFLLCNTGRKCVFSEHGLLTTVAYKLGRDKPVYYAL 183
Query: 1093 EGSVAIAGAVVRWLRDNLGIIKTSEEIEKLAKEVGTSYGCYFVPAFSGLYAPYWEPSARG 1272
EGSVAIAGAV+RWLRDNLGIIKTSEEIEKLAKEVGTSYGCYFVPAFSGLYAPYWEPSARG
Sbjct: 184 EGSVAIAGAVIRWLRDNLGIIKTSEEIEKLAKEVGTSYGCYFVPAFSGLYAPYWEPSARG 243
Query: 1273 IICGLTQFTNRCHIAFAALEAVCFQTREILDAMNRDCGMPLRHLXVDGGMTNNKILMQLQ 1452
IICGLTQFTN+CHIAFAALEAVCFQTREILDAMNRDCG+PL HL VDGGMTNNKILMQLQ
Sbjct: 244 IICGLTQFTNKCHIAFAALEAVCFQTREILDAMNRDCGIPLSHLQVDGGMTNNKILMQLQ 303
Query: 1453 ADILYIPVVKPSMPXNTXXXXXXXXXXXEXVGVWSLDP*XLSAVTVERFEPSDHAEESEI 1632
ADILYIPVVKPSMP T E VGVWSL+P LSAVT+ERFEP +AEESEI
Sbjct: 304 ADILYIPVVKPSMPETTALGAAMAAGAAEGVGVWSLEPEDLSAVTMERFEPQINAEESEI 363
Query: 1633 RXSTXKKALMXSMGWXT 1683
R ST KKA+M S+GW T
Sbjct: 364 RYSTWKKAVMKSVGWVT 380
>ref|XP_860333.1| PREDICTED: similar to glycerol kinase isoform 2 isoform 6 [Canis
familiaris].
Length = 424
Score = 690 bits (1781), Expect = 0.0
Identities = 341/383 (89%), Positives = 352/383 (91%), Gaps = 6/383 (1%)
Frame = +1
Query: 553 SKTGLPLSTYFSAVKLRWLLDNVRKVQKAVEEERALFGTVDSWLIWCLTGGANGGVHCTD 732
SKTGLPLSTYFSAVKLRWLLDNVRKVQKAVEE+RALFGT+DSWLIW LTGGANGGVHCTD
Sbjct: 4 SKTGLPLSTYFSAVKLRWLLDNVRKVQKAVEEDRALFGTIDSWLIWSLTGGANGGVHCTD 63
Query: 733 VTNASRTMLFNIHSLEWDKELCEFFEIPMKILPNVRSSSEIYGLMK------AGALEGVP 894
VTNASRTMLFNIHSLEWDKELCEFFEIPMKILPNVRSSSEIYGLMK AGALEGVP
Sbjct: 64 VTNASRTMLFNIHSLEWDKELCEFFEIPMKILPNVRSSSEIYGLMKISHSLKAGALEGVP 123
Query: 895 ISGCLGDQSAALVGQMCFQDGQAKNTYGTGCFLLCNTGRKCVFSEHGLLTTVAYKLGRDK 1074
ISGCLGDQSAALVGQMCFQDG+AKNTYGTGCFLLCNTGRKCVFSEHGLLTTVAYKLGRDK
Sbjct: 124 ISGCLGDQSAALVGQMCFQDGEAKNTYGTGCFLLCNTGRKCVFSEHGLLTTVAYKLGRDK 183
Query: 1075 PVYYALEGSVAIAGAVVRWLRDNLGIIKTSEEIEKLAKEVGTSYGCYFVPAFSGLYAPYW 1254
PVYYALEGSVAIAGAV+RWLRDNLGIIKTSEEIEKLAKEVGTSYGCYFVPAFSGLYAPYW
Sbjct: 184 PVYYALEGSVAIAGAVIRWLRDNLGIIKTSEEIEKLAKEVGTSYGCYFVPAFSGLYAPYW 243
Query: 1255 EPSARGIICGLTQFTNRCHIAFAALEAVCFQTREILDAMNRDCGMPLRHLXVDGGMTNNK 1434
EPSARGIICGLTQFTN+CHIAFAALEAVCFQTREILDAMNRDCG+PL HL VDGGMTNNK
Sbjct: 244 EPSARGIICGLTQFTNKCHIAFAALEAVCFQTREILDAMNRDCGIPLSHLQVDGGMTNNK 303
Query: 1435 ILMQLQADILYIPVVKPSMPXNTXXXXXXXXXXXEXVGVWSLDP*XLSAVTVERFEPSDH 1614
ILMQLQADILYIPVVKPSMP T E VGVWSL+P LSAVT+ERFEP +
Sbjct: 304 ILMQLQADILYIPVVKPSMPETTALGAAMAAGAAEGVGVWSLEPEDLSAVTMERFEPQIN 363
Query: 1615 AEESEIRXSTXKKALMXSMGWXT 1683
AEESEIR ST KKA+M S+GW T
Sbjct: 364 AEESEIRYSTWKKAVMKSVGWVT 386
>ref|XP_542815.2| PREDICTED: similar to CG1271-PA, isoform A [Canis familiaris].
Length = 534
Score = 241 bits (616), Expect = 1e-63
Identities = 164/542 (30%), Positives = 273/542 (50%), Gaps = 19/542 (3%)
Frame = +1
Query: 109 AIP--RRPQAGFMAAANKAVLGPLVGAVDQGTSSTRFLVFNSKTAELLSHHQVELKQEFP 282
A+P RRP+ +AA G ++G +D G+S R V++ T S Q +++ +P
Sbjct: 6 AVPEKRRPER---SAAGPTPAGFVLG-LDVGSSVIRCHVYDHATLIRGSSAQ-KVESLYP 60
Query: 283 KEGWVEQDPKEILNSVYECIEKTCEKLGQLNIDISNIKAIGVSNQRETTVVWDKLTGEPL 462
+ GWVE DP + I+++ G I+++ I +G+S QR T + W+K TG
Sbjct: 61 QAGWVEIDPDALWLQFVTVIKESVRVAG---IEMNQIVGLGISTQRATFITWNKKTGNHF 117
Query: 463 YNAVVWLDLRTQSTVEN-----LSKRIPGN----NNFVKSKTGLPLSTY-----FSAVKL 600
+N + W DLR V++ + K + + + F ++K L +S + +++L
Sbjct: 118 HNFISWQDLRAVELVKSWNNSLIMKLLQNSCRVLHFFTRNKRFLAVSLFNFTNQHVSLRL 177
Query: 601 RWLLDNVRKVQKAVEEERALFGTVDSWLIWCLTGGANGGVHCTDVTNASRTMLFNIHSLE 780
W+L N+ +VQKAVEE+ FGT+D+WL+ LT G+ TD +NAS T LF+ + +
Sbjct: 178 AWILQNLVEVQKAVEEDNCCFGTLDTWLLHKLTKGSE---FATDFSNASATGLFDPYKMH 234
Query: 781 WDKELCEFFEIPMKILPNVRSSSEIYGLMKAGALE-GVPISGCLGDQSAALVGQMCFQDG 957
W L IP+ ILP V+ +S +G + +PI + DQ +A+ G+ CF G
Sbjct: 235 WSGLLASLLSIPLSILPPVKDTSHNFGSVDEEIFGVPIPIVAMVADQQSAMFGECCFHAG 294
Query: 958 QAKNTYGTGCFLLCNTGRKCVFSEHGLLTTVAYKLGRDKPVYYALEGSVAIAGAVVRWLR 1137
K T GTG FL NTG + G + +K+G++ V E + G +++W +
Sbjct: 295 DVKLTMGTGTFLDINTGNNLQHTIRGFYPLIGWKIGQE--VVCLAESNAGDTGTIIKWAQ 352
Query: 1138 DNLGIIKTSEEIEKLAKEVGTSYGCYFVPAFSGLYAPYWEPSARGIICGLTQFTNRCHIA 1317
+ L + + E EK+AK + S G FVP+FSGL AP +P A GL TN+ H+
Sbjct: 353 E-LDLFTDAAETEKMAKSLEDSEGVCFVPSFSGLQAPLNDPCACASFMGLKPSTNKYHLV 411
Query: 1318 FAALEAVCFQTREILDAMNRDCGMPLRHLXVDGGMTNNKILMQLQADILYIPVVKPSMPX 1497
A LE++ F+ +++ + M ++ +P+ + DGG+ N +MQ+ +D++ + +P
Sbjct: 412 RAILESIAFRNKQLYELMQKEIHIPVTKVRADGGVCKNNFVMQMTSDLINANIERPVNID 471
Query: 1498 NTXXXXXXXXXXXEXVGVWSLDP*XLSAVTVER--FEPSDHAEESEIRXSTXKKALMXSM 1671
+ +G W+ D L + FEP +E E+ KA+ SM
Sbjct: 472 MSCLGAASLAGL--AIGFWT-DKEELKKLRQSEVVFEPQKKWQEYEMSMENWVKAVKRSM 528
Query: 1672 GW 1677
W
Sbjct: 529 NW 530
>ref|XP_860305.1| PREDICTED: similar to glycerol kinase isoform 2 isoform 5 [Canis
familiaris].
Length = 143
Score = 148 bits (373), Expect = 2e-35
Identities = 75/105 (71%), Positives = 81/105 (77%)
Frame = +1
Query: 1369 MNRDCGMPLRHLXVDGGMTNNKILMQLQADILYIPVVKPSMPXNTXXXXXXXXXXXEXVG 1548
MNRDCG+PL HL VDGGMTNNKILMQLQADILYIPVVKPSMP T E VG
Sbjct: 1 MNRDCGIPLSHLQVDGGMTNNKILMQLQADILYIPVVKPSMPETTALGAAMAAGAAEGVG 60
Query: 1549 VWSLDP*XLSAVTVERFEPSDHAEESEIRXSTXKKALMXSMGWXT 1683
VWSL+P LSAVT+ERFEP +AEESEIR ST KKA+M S+GW T
Sbjct: 61 VWSLEPEDLSAVTMERFEPQINAEESEIRYSTWKKAVMKSVGWVT 105
>ref|XP_860227.1| PREDICTED: similar to Glycerol kinase isoform 3 [Canis familiaris].
Length = 55
Score = 97.8 bits (242), Expect = 3e-20
Identities = 47/52 (90%), Positives = 51/52 (98%)
Frame = +1
Query: 139 MAAANKAVLGPLVGAVDQGTSSTRFLVFNSKTAELLSHHQVELKQEFPKEGW 294
MAAA KAVLGPLVGAVDQGTSSTRFLVFNS+TAELLSHHQVE+KQEFP+EG+
Sbjct: 1 MAAAKKAVLGPLVGAVDQGTSSTRFLVFNSRTAELLSHHQVEIKQEFPREGY 52
Database: RefSeq49_CP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,874,504
Number of sequences in database: 33,336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33336
Number of Hits to DB: 60,593,360
Number of extensions: 1466979
Number of successful extensions: 4185
Number of sequences better than 1.0e-05: 11
Number of HSP's gapped: 4166
Number of HSP's successfully gapped: 11
Length of query: 561
Length of database: 18,874,504
Length adjustment: 108
Effective length of query: 453
Effective length of database: 15,274,216
Effective search space: 6919219848
Effective search space used: 6919219848
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Animal-Genome cDNA 20110601C-013265
Search to RefSeqBP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-013265
(1683 letters)
Database: RefSeq49_BP.fasta
33,088 sequences; 17,681,374 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001068704.1| glycerol kinase [Bos taurus]. 954 0.0
Alignment gi|NP_001039902.1| glycerol kinase [Bos taurus]. 942 0.0
Alignment gi|XP_002688426.1| PREDICTED: glycerol kinase 2-like [Bos tauru... 857 0.0
Alignment gi|XP_591790.2| PREDICTED: glycerol kinase 2 [Bos taurus]. 857 0.0
Alignment gi|XP_001256979.1| PREDICTED: glycerol kinase-like, partial [Bo... 501 e-142
Alignment gi|NP_001030550.2| putative glycerol kinase 5 [Bos taurus]. 253 4e-67
Alignment gi|NP_001069016.1| sedoheptulokinase [Bos taurus]. 50 6e-06
>ref|NP_001068704.1| glycerol kinase [Bos taurus].
Length = 559
Score = 954 bits (2466), Expect = 0.0
Identities = 473/521 (90%), Positives = 488/521 (93%), Gaps = 6/521 (1%)
Frame = +1
Query: 139 MAAANKAVLGPLVGAVDQGTSSTRFLVFNSKTAELLSHHQVELKQEFPKEGWVEQDPKEI 318
MA+A KAVLGPLVGAVDQGTSSTRFLVFNSKTAELLSHHQVE+KQEFP+EGWVEQDPKEI
Sbjct: 1 MASAKKAVLGPLVGAVDQGTSSTRFLVFNSKTAELLSHHQVEIKQEFPREGWVEQDPKEI 60
Query: 319 LNSVYECIEKTCEKLGQLNIDISNIKAIGVSNQRETTVVWDKLTGEPLYNAVVWLDLRTQ 498
L SVYECIEKTCEKLGQLNIDISNIKAIGVSNQRETTVVWDKLTGEPLYNAVVWLDLRTQ
Sbjct: 61 LQSVYECIEKTCEKLGQLNIDISNIKAIGVSNQRETTVVWDKLTGEPLYNAVVWLDLRTQ 120
Query: 499 STVENLSKRIPGNNNFVKSKTGLPLSTYFSAVKLRWLLDNVRKVQKAVEEERALFGTVDS 678
STVE+LSKRIPGNNNFVKSKTGLPLSTYFSAVKLRWLLDNVRKVQKAVEE+RALFGT+DS
Sbjct: 121 STVESLSKRIPGNNNFVKSKTGLPLSTYFSAVKLRWLLDNVRKVQKAVEEDRALFGTIDS 180
Query: 679 WLIWCLTGGANGGVHCTDVTNASRTMLFNIHSLEWDKELCEFFEIPMKILPNVRSSSEIY 858
WLIW LTGGA+GGVHCTDVTNASRTMLFNIHSLEWDKELCEFFEIPMKILPNVRSSSEIY
Sbjct: 181 WLIWSLTGGASGGVHCTDVTNASRTMLFNIHSLEWDKELCEFFEIPMKILPNVRSSSEIY 240
Query: 859 GLMK------AGALEGVPISGCLGDQSAALVGQMCFQDGQAKNTYGTGCFLLCNTGRKCV 1020
GLMK AGALEGVPISGCLGDQSAALVGQMCFQDGQAKNTYGTGCFLLCNTGRKCV
Sbjct: 241 GLMKISHSPKAGALEGVPISGCLGDQSAALVGQMCFQDGQAKNTYGTGCFLLCNTGRKCV 300
Query: 1021 FSEHGLLTTVAYKLGRDKPVYYALEGSVAIAGAVVRWLRDNLGIIKTSEEIEKLAKEVGT 1200
FSEHGLLTTVAYKLGRDKPVYYALEGSVAIAGAV+RWLRDNLGIIK+SEEIEKLAKEVGT
Sbjct: 301 FSEHGLLTTVAYKLGRDKPVYYALEGSVAIAGAVIRWLRDNLGIIKSSEEIEKLAKEVGT 360
Query: 1201 SYGCYFVPAFSGLYAPYWEPSARGIICGLTQFTNRCHIAFAALEAVCFQTREILDAMNRD 1380
SYGCYFVPAFSGLYAPYWEPSARGIICGLTQFTN+CHIAFAALEAVCFQTREILDAMNRD
Sbjct: 361 SYGCYFVPAFSGLYAPYWEPSARGIICGLTQFTNKCHIAFAALEAVCFQTREILDAMNRD 420
Query: 1381 CGMPLRHLXVDGGMTNNKILMQLQADILYIPVVKPSMPXNTXXXXXXXXXXXEXVGVWSL 1560
CG+PL HL VDGGMTNNKILMQLQADILYIPVVKPSMP T E VGVWSL
Sbjct: 421 CGIPLSHLQVDGGMTNNKILMQLQADILYIPVVKPSMPETTALGAAMAAGAAEGVGVWSL 480
Query: 1561 DP*XLSAVTVERFEPSDHAEESEIRXSTXKKALMXSMGWXT 1683
+P LSAVT+ERFEP +AEESEIR ST KKA+M SMGW T
Sbjct: 481 EPEDLSAVTMERFEPQINAEESEIRYSTWKKAVMKSMGWVT 521
>ref|NP_001039902.1| glycerol kinase [Bos taurus].
Length = 553
Score = 942 bits (2435), Expect = 0.0
Identities = 464/515 (90%), Positives = 481/515 (93%)
Frame = +1
Query: 139 MAAANKAVLGPLVGAVDQGTSSTRFLVFNSKTAELLSHHQVELKQEFPKEGWVEQDPKEI 318
MAA KAVLGPLVGAVDQGTSSTRFLVFNSKTAELLSHHQVE+KQEFPKEGWVEQDPKEI
Sbjct: 1 MAATKKAVLGPLVGAVDQGTSSTRFLVFNSKTAELLSHHQVEIKQEFPKEGWVEQDPKEI 60
Query: 319 LNSVYECIEKTCEKLGQLNIDISNIKAIGVSNQRETTVVWDKLTGEPLYNAVVWLDLRTQ 498
L SVYECIEKTCEKLGQLNIDISNIKAIGVSNQRETTVVWDKLTGEPLYNAVVWLDLRTQ
Sbjct: 61 LLSVYECIEKTCEKLGQLNIDISNIKAIGVSNQRETTVVWDKLTGEPLYNAVVWLDLRTQ 120
Query: 499 STVENLSKRIPGNNNFVKSKTGLPLSTYFSAVKLRWLLDNVRKVQKAVEEERALFGTVDS 678
STVE+LSK IP NNNFVK+KTGLPLSTYFSAVKLRWLLDNVRKVQKAVEE+RALFGT+DS
Sbjct: 121 STVESLSKSIPVNNNFVKTKTGLPLSTYFSAVKLRWLLDNVRKVQKAVEEDRALFGTIDS 180
Query: 679 WLIWCLTGGANGGVHCTDVTNASRTMLFNIHSLEWDKELCEFFEIPMKILPNVRSSSEIY 858
WLIW LTGGA GGVHCTDVTNASRTMLFNIHSLEWDKELCEFF++PMKILPN+RSSSEIY
Sbjct: 181 WLIWSLTGGARGGVHCTDVTNASRTMLFNIHSLEWDKELCEFFKVPMKILPNIRSSSEIY 240
Query: 859 GLMKAGALEGVPISGCLGDQSAALVGQMCFQDGQAKNTYGTGCFLLCNTGRKCVFSEHGL 1038
GLMKAG+LEGVPISGCLGDQSAALVGQ+CFQDGQAKNTYGTGCFLLCNTG KCVFSEHGL
Sbjct: 241 GLMKAGSLEGVPISGCLGDQSAALVGQLCFQDGQAKNTYGTGCFLLCNTGHKCVFSEHGL 300
Query: 1039 LTTVAYKLGRDKPVYYALEGSVAIAGAVVRWLRDNLGIIKTSEEIEKLAKEVGTSYGCYF 1218
LTTVAYKLGRDKPVYYALEGSVAIAGAVVRWLRDNLGIIKTSEEIEKLA EVGTSYGCYF
Sbjct: 301 LTTVAYKLGRDKPVYYALEGSVAIAGAVVRWLRDNLGIIKTSEEIEKLANEVGTSYGCYF 360
Query: 1219 VPAFSGLYAPYWEPSARGIICGLTQFTNRCHIAFAALEAVCFQTREILDAMNRDCGMPLR 1398
VPAFSGLYAPYWEPSARGIICGLTQFTN+CHIAFAALEAVCFQTREILDAMNRDCG+PL
Sbjct: 361 VPAFSGLYAPYWEPSARGIICGLTQFTNKCHIAFAALEAVCFQTREILDAMNRDCGIPLS 420
Query: 1399 HLXVDGGMTNNKILMQLQADILYIPVVKPSMPXNTXXXXXXXXXXXEXVGVWSLDP*XLS 1578
HL VDGGMTNNKILMQLQADILYIPVVKPSMP T E VGVWSL+P LS
Sbjct: 421 HLQVDGGMTNNKILMQLQADILYIPVVKPSMPETTALGAAMAAGAAEGVGVWSLEPEDLS 480
Query: 1579 AVTVERFEPSDHAEESEIRXSTXKKALMXSMGWXT 1683
AVT+ERFEP +A+ESEIR ST KKA+M SM W T
Sbjct: 481 AVTMERFEPQINAKESEIRYSTWKKAVMKSMDWAT 515
>ref|XP_002688426.1| PREDICTED: glycerol kinase 2-like [Bos taurus].
Length = 554
Score = 857 bits (2213), Expect = 0.0
Identities = 418/515 (81%), Positives = 452/515 (87%)
Frame = +1
Query: 139 MAAANKAVLGPLVGAVDQGTSSTRFLVFNSKTAELLSHHQVELKQEFPKEGWVEQDPKEI 318
MAA A GPLVGA+ QGT + F+VFNSKT+E+LSHH+VEL QE PKEGW+EQDPK+I
Sbjct: 1 MAAPKTAAGGPLVGALVQGTDYSNFMVFNSKTSEVLSHHRVELTQEVPKEGWIEQDPKQI 60
Query: 319 LNSVYECIEKTCEKLGQLNIDISNIKAIGVSNQRETTVVWDKLTGEPLYNAVVWLDLRTQ 498
L SV ECIEKTCEKL +LNIDISNIKAIGVSNQRETTVVWDKLTGEPLYNAV+WLD+RTQ
Sbjct: 61 LQSVNECIEKTCEKLQELNIDISNIKAIGVSNQRETTVVWDKLTGEPLYNAVMWLDVRTQ 120
Query: 499 STVENLSKRIPGNNNFVKSKTGLPLSTYFSAVKLRWLLDNVRKVQKAVEEERALFGTVDS 678
STVE LSK+IPGNNNFVKSKTGLPLSTYFSAVKLRW+LDNVRK QKAVEE RALFGTVDS
Sbjct: 121 STVETLSKKIPGNNNFVKSKTGLPLSTYFSAVKLRWILDNVRKAQKAVEEGRALFGTVDS 180
Query: 679 WLIWCLTGGANGGVHCTDVTNASRTMLFNIHSLEWDKELCEFFEIPMKILPNVRSSSEIY 858
WLIW LTGG +GG+HCTDVTNASRTMLFNIHSLEWDKELC+FFEIPM ILPN+ SSSEIY
Sbjct: 181 WLIWSLTGGVDGGIHCTDVTNASRTMLFNIHSLEWDKELCDFFEIPMDILPNIWSSSEIY 240
Query: 859 GLMKAGALEGVPISGCLGDQSAALVGQMCFQDGQAKNTYGTGCFLLCNTGRKCVFSEHGL 1038
G +K G LEGVPISGCLGDQSAALVGQMCFQ+GQAKNTYGTGCFLLCNTG KCVFSE GL
Sbjct: 241 GRVKTGTLEGVPISGCLGDQSAALVGQMCFQEGQAKNTYGTGCFLLCNTGHKCVFSECGL 300
Query: 1039 LTTVAYKLGRDKPVYYALEGSVAIAGAVVRWLRDNLGIIKTSEEIEKLAKEVGTSYGCYF 1218
LTTVAYKLG++KPV+YALEGSVAI GAV+ WLRDNLGIIKTSEE EKLAKEVGTSYGCYF
Sbjct: 301 LTTVAYKLGKNKPVFYALEGSVAIGGAVIHWLRDNLGIIKTSEESEKLAKEVGTSYGCYF 360
Query: 1219 VPAFSGLYAPYWEPSARGIICGLTQFTNRCHIAFAALEAVCFQTREILDAMNRDCGMPLR 1398
+PAFSGLYAPYWEP+ARGIICGLTQFTN+ HIAFAALEA+CFQTREILDAMNRDCG+PL
Sbjct: 361 IPAFSGLYAPYWEPTARGIICGLTQFTNKSHIAFAALEAICFQTREILDAMNRDCGIPLS 420
Query: 1399 HLXVDGGMTNNKILMQLQADILYIPVVKPSMPXNTXXXXXXXXXXXEXVGVWSLDP*XLS 1578
HL VDG MTNNK+LMQLQADIL+IPV+K SMP E V VWSL P LS
Sbjct: 421 HLQVDGEMTNNKVLMQLQADILHIPVIKASMPETMALGAAMAAGAAEGVNVWSLKPEDLS 480
Query: 1579 AVTVERFEPSDHAEESEIRXSTXKKALMXSMGWXT 1683
+ +ERFEP A ESEIR ST KKA+M SMGW T
Sbjct: 481 TIMMERFEPQIKATESEIRYSTWKKAVMKSMGWVT 515
>ref|XP_591790.2| PREDICTED: glycerol kinase 2 [Bos taurus].
Length = 554
Score = 857 bits (2213), Expect = 0.0
Identities = 418/515 (81%), Positives = 452/515 (87%)
Frame = +1
Query: 139 MAAANKAVLGPLVGAVDQGTSSTRFLVFNSKTAELLSHHQVELKQEFPKEGWVEQDPKEI 318
MAA A GPLVGA+ QGT + F+VFNSKT+E+LSHH+VEL QE PKEGW+EQDPK+I
Sbjct: 1 MAAPKTAAGGPLVGALVQGTDYSNFMVFNSKTSEVLSHHRVELTQEVPKEGWIEQDPKQI 60
Query: 319 LNSVYECIEKTCEKLGQLNIDISNIKAIGVSNQRETTVVWDKLTGEPLYNAVVWLDLRTQ 498
L SV ECIEKTCEKL +LNIDISNIKAIGVSNQRETTVVWDKLTGEPLYNAV+WLD+RTQ
Sbjct: 61 LQSVNECIEKTCEKLQELNIDISNIKAIGVSNQRETTVVWDKLTGEPLYNAVMWLDVRTQ 120
Query: 499 STVENLSKRIPGNNNFVKSKTGLPLSTYFSAVKLRWLLDNVRKVQKAVEEERALFGTVDS 678
STVE LSK+IPGNNNFVKSKTGLPLSTYFSAVKLRW+LDNVRK QKAVEE RALFGTVDS
Sbjct: 121 STVETLSKKIPGNNNFVKSKTGLPLSTYFSAVKLRWILDNVRKAQKAVEEGRALFGTVDS 180
Query: 679 WLIWCLTGGANGGVHCTDVTNASRTMLFNIHSLEWDKELCEFFEIPMKILPNVRSSSEIY 858
WLIW LTGG +GG+HCTDVTNASRTMLFNIHSLEWDKELC+FFEIPM ILPN+ SSSEIY
Sbjct: 181 WLIWSLTGGVDGGIHCTDVTNASRTMLFNIHSLEWDKELCDFFEIPMDILPNIWSSSEIY 240
Query: 859 GLMKAGALEGVPISGCLGDQSAALVGQMCFQDGQAKNTYGTGCFLLCNTGRKCVFSEHGL 1038
G +K G LEGVPISGCLGDQSAALVGQMCFQ+GQAKNTYGTGCFLLCNTG KCVFSE GL
Sbjct: 241 GRVKTGTLEGVPISGCLGDQSAALVGQMCFQEGQAKNTYGTGCFLLCNTGHKCVFSECGL 300
Query: 1039 LTTVAYKLGRDKPVYYALEGSVAIAGAVVRWLRDNLGIIKTSEEIEKLAKEVGTSYGCYF 1218
LTTVAYKLG++KPV+YALEGSVAI GAV+ WLRDNLGIIKTSEE EKLAKEVGTSYGCYF
Sbjct: 301 LTTVAYKLGKNKPVFYALEGSVAIGGAVIHWLRDNLGIIKTSEESEKLAKEVGTSYGCYF 360
Query: 1219 VPAFSGLYAPYWEPSARGIICGLTQFTNRCHIAFAALEAVCFQTREILDAMNRDCGMPLR 1398
+PAFSGLYAPYWEP+ARGIICGLTQFTN+ HIAFAALEA+CFQTREILDAMNRDCG+PL
Sbjct: 361 IPAFSGLYAPYWEPTARGIICGLTQFTNKSHIAFAALEAICFQTREILDAMNRDCGIPLS 420
Query: 1399 HLXVDGGMTNNKILMQLQADILYIPVVKPSMPXNTXXXXXXXXXXXEXVGVWSLDP*XLS 1578
HL VDG MTNNK+LMQLQADIL+IPV+K SMP E V VWSL P LS
Sbjct: 421 HLQVDGEMTNNKVLMQLQADILHIPVIKASMPETMALGAAMAAGAAEGVNVWSLKPEDLS 480
Query: 1579 AVTVERFEPSDHAEESEIRXSTXKKALMXSMGWXT 1683
+ +ERFEP A ESEIR ST KKA+M SMGW T
Sbjct: 481 TIMMERFEPQIKATESEIRYSTWKKAVMKSMGWVT 515
>ref|XP_001256979.1| PREDICTED: glycerol kinase-like, partial [Bos taurus].
Length = 261
Score = 501 bits (1290), Expect = e-142
Identities = 245/261 (93%), Positives = 254/261 (97%)
Frame = +1
Query: 139 MAAANKAVLGPLVGAVDQGTSSTRFLVFNSKTAELLSHHQVELKQEFPKEGWVEQDPKEI 318
MAA KAVLGPLVGAVDQGTSSTRFLVFNSKTAELLSHHQVE+KQEFPKEGWVEQDPKEI
Sbjct: 1 MAATKKAVLGPLVGAVDQGTSSTRFLVFNSKTAELLSHHQVEIKQEFPKEGWVEQDPKEI 60
Query: 319 LNSVYECIEKTCEKLGQLNIDISNIKAIGVSNQRETTVVWDKLTGEPLYNAVVWLDLRTQ 498
L SVYECIEKTCEKLGQLNIDISNIKAIGVSNQRETTVVWDKLTGEPLYNAVVWLDLRTQ
Sbjct: 61 LLSVYECIEKTCEKLGQLNIDISNIKAIGVSNQRETTVVWDKLTGEPLYNAVVWLDLRTQ 120
Query: 499 STVENLSKRIPGNNNFVKSKTGLPLSTYFSAVKLRWLLDNVRKVQKAVEEERALFGTVDS 678
STVE+LSK IP NNNFVK+KTGLPLSTYFSAVKLRWLLDNVRKVQKAVEE+RALFGT+DS
Sbjct: 121 STVESLSKSIPVNNNFVKTKTGLPLSTYFSAVKLRWLLDNVRKVQKAVEEDRALFGTIDS 180
Query: 679 WLIWCLTGGANGGVHCTDVTNASRTMLFNIHSLEWDKELCEFFEIPMKILPNVRSSSEIY 858
WLIW LTGGA GGVHCTDVTNASRTMLFNIHSLEWDKELCEFF++PMKILPN+RSSSEIY
Sbjct: 181 WLIWSLTGGARGGVHCTDVTNASRTMLFNIHSLEWDKELCEFFKVPMKILPNIRSSSEIY 240
Query: 859 GLMKAGALEGVPISGCLGDQS 921
GLMKAG+LEGVPISGCLGDQS
Sbjct: 241 GLMKAGSLEGVPISGCLGDQS 261
>ref|NP_001030550.2| putative glycerol kinase 5 [Bos taurus].
Length = 528
Score = 253 bits (646), Expect = 4e-67
Identities = 165/515 (32%), Positives = 260/515 (50%), Gaps = 17/515 (3%)
Frame = +1
Query: 184 VDQGTSSTRFLVFNSKTAELLSHHQVELKQEFPKEGWVEQDPKEILNSVYECIEKTCEKL 363
VD G+S R V++ + A + +++ +P+ GWVE DP + I+++ +
Sbjct: 24 VDVGSSMIRCHVYD-RAARICGSSAQKVESLYPQPGWVEIDPDVLWLQFVAVIKESVKAA 82
Query: 364 GQLNIDISNIKAIGVSNQRETTVVWDKLTGEPLYNAVVWLDLRTQSTVEN-----LSKRI 528
G I+ + I +G+S QR T + WDK TG+ +N + W DLR V++ L K I
Sbjct: 83 G---IETNQIVGLGISTQRATFITWDKKTGKHFHNFISWQDLRATELVKSWNGSLLMKLI 139
Query: 529 PGN----NNFVKSKTGLPLS-----TYFSAVKLRWLLDNVRKVQKAVEEERALFGTVDSW 681
+ + F +SK L S T +++L W+L N+ +VQKAVEEE FGTVD+W
Sbjct: 140 HSSCRVLHFFTRSKQFLAASLFTFTTQHVSLRLAWILQNLTEVQKAVEEENCCFGTVDTW 199
Query: 682 LIWCLTGGANGGVHCTDVTNASRTMLFNIHSLEWDKELCEFFEIPMKILPNVRSSSEIYG 861
L+ LT G+ TD +NAS T LF+ + + W K + IP+ +LP V+ +S +G
Sbjct: 200 LLHKLTKGSE---FATDFSNASTTGLFDPYEMCWSKIVTSLLSIPLSLLPPVKDTSHNFG 256
Query: 862 LMKAGALE-GVPISGCLGDQSAALVGQMCFQDGQAKNTYGTGCFLLCNTGRKCVFSEHGL 1038
+ +PI + DQ AA+ G+ CFQ G K T GTG FL NTG S G
Sbjct: 257 SVDEEIFGVPIPIVALVADQQAAMFGECCFQTGDVKLTMGTGTFLDINTGNNPQQSVGGF 316
Query: 1039 LTTVAYKLGRDKPVYYALEGSVAIAGAVVRWLRDNLGIIKTSEEIEKLAKEVGTSYGCYF 1218
+ +K+G++ V E + G + W + L + + E EK+A+ + S G YF
Sbjct: 317 YPLIGWKIGQE--VVCLAESNAGDTGTAIEWAQQ-LDLFTDAAETEKMAQSLEDSEGVYF 373
Query: 1219 VPAFSGLYAPYWEPSARGIICGLTQFTNRCHIAFAALEAVCFQTREILDAMNRDCGMPLR 1398
VP+FSGL AP +P A GL TN+ H+ A LE++ F+ +++ + M ++ +P+R
Sbjct: 374 VPSFSGLQAPLNDPCACASFMGLKPSTNKYHLVRAILESIAFRNKQLYETMQKEIHIPVR 433
Query: 1399 HLXVDGGMTNNKILMQLQADILYIPVVKPSMPXNTXXXXXXXXXXXEXVGVWSLDP*XLS 1578
+ DGG+ N +MQ+ +D++ + +P + VG WS D L
Sbjct: 434 KIRADGGVCKNSFVMQMTSDLINETIDRPVHIDMSCSGAASLAGL--AVGFWS-DKEELK 490
Query: 1579 AVTVER--FEPSDHAEESEIRXSTXKKALMXSMGW 1677
+ F+P +E E+ KA+ SM W
Sbjct: 491 KLRQSEMVFKPQKKWQEYEVNMGNWVKAVKRSMNW 525
>ref|NP_001069016.1| sedoheptulokinase [Bos taurus].
Length = 478
Score = 50.1 bits (118), Expect = 6e-06
Identities = 55/232 (23%), Positives = 88/232 (37%), Gaps = 17/232 (7%)
Frame = +1
Query: 298 EQDPKEILNSVYECIEKTCEKLGQLNIDISNIKAIGVSNQRETTVVWDKLTG-------- 453
EQD K I+ +++EC+ + + + IGVS Q + W G
Sbjct: 59 EQDVKRIIQALHECLAALPRQ------QLRKVCGIGVSGQMHGVMFWKTGQGCAWTEGGA 112
Query: 454 ----EP--LYNAVVWLDLRTQSTVENLSKRIPGNNNFVKSKTGLPLSTYFSAVKLRWLLD 615
EP + + V W D R S +P + + TG +T F WLL
Sbjct: 113 APVFEPRAVSHLVTWQDGRCSS---EFLASLPQPESHLSVATGFGCATIF------WLLK 163
Query: 616 NVRKVQKAVEEERALFGTVDSWLIWCLTGGANGGVHCTDVTNASRTMLFNIHSLEWDKEL 795
N + K+ + GT+ +++ L G A NA+ FN S W+ E+
Sbjct: 164 NSPEFLKSYDTA----GTIHDYVVAMLCGLARP---LMSDQNAASWGYFNTRSQSWNLEI 216
Query: 796 CEFFEIPMKILPNVRSSSEIYGLMKAGALE---GVPISGCLGDQSAALVGQM 942
P+++LP+V + G E G + LGD A++ M
Sbjct: 217 LRAAGFPVQLLPDVAEPGSVAGRTSQAWFEIPRGTQVGVALGDLQASVYSCM 268
Database: RefSeq49_BP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 17,681,374
Number of sequences in database: 33,088
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33088
Number of Hits to DB: 58,151,474
Number of extensions: 1433110
Number of successful extensions: 4197
Number of sequences better than 1.0e-05: 7
Number of HSP's gapped: 4186
Number of HSP's successfully gapped: 7
Length of query: 561
Length of database: 17,681,374
Length adjustment: 107
Effective length of query: 454
Effective length of database: 14,140,958
Effective search space: 6419994932
Effective search space used: 6419994932
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to RefSeqSP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-013265
(1683 letters)
Database: RefSeq49_SP.fasta
24,897 sequences; 11,343,932 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001137180.1| glycerol kinase [Sus scrofa]. 984 0.0
Alignment gi|XP_003133723.1| PREDICTED: glycerol kinase-like [Sus scrofa]. 944 0.0
Alignment gi|XP_003129421.2| PREDICTED: glycerol kinase 2-like [Sus scrof... 868 0.0
Alignment gi|XP_003132504.2| PREDICTED: putative glycerol kinase 5-like [... 239 4e-63
>ref|NP_001137180.1| glycerol kinase [Sus scrofa].
Length = 524
Score = 984 bits (2545), Expect = 0.0
Identities = 489/515 (94%), Positives = 491/515 (95%)
Frame = +1
Query: 139 MAAANKAVLGPLVGAVDQGTSSTRFLVFNSKTAELLSHHQVELKQEFPKEGWVEQDPKEI 318
MAAANKAVLGPLVGAVDQGTSSTRFLVFNSKTAELLSHHQVELKQEFPKEGWVEQDPKEI
Sbjct: 1 MAAANKAVLGPLVGAVDQGTSSTRFLVFNSKTAELLSHHQVELKQEFPKEGWVEQDPKEI 60
Query: 319 LNSVYECIEKTCEKLGQLNIDISNIKAIGVSNQRETTVVWDKLTGEPLYNAVVWLDLRTQ 498
LNSVYECIEKTCEKLGQLNIDISNIKAIGVSNQRETTVVWDKLTGEPLYNAVVWLDLRTQ
Sbjct: 61 LNSVYECIEKTCEKLGQLNIDISNIKAIGVSNQRETTVVWDKLTGEPLYNAVVWLDLRTQ 120
Query: 499 STVENLSKRIPGNNNFVKSKTGLPLSTYFSAVKLRWLLDNVRKVQKAVEEERALFGTVDS 678
STVENLSKRIPGNNNFVKSKTGLPLSTYFSAVK RWLLDNVRKVQKAVEEERALFGTVDS
Sbjct: 121 STVENLSKRIPGNNNFVKSKTGLPLSTYFSAVKPRWLLDNVRKVQKAVEEERALFGTVDS 180
Query: 679 WLIWCLTGGANGGVHCTDVTNASRTMLFNIHSLEWDKELCEFFEIPMKILPNVRSSSEIY 858
WLIWCLTGGANGGVHCTDVTNASRTMLFNIHSLEWDKELCEFFEIPMKILPNVRSSSEIY
Sbjct: 181 WLIWCLTGGANGGVHCTDVTNASRTMLFNIHSLEWDKELCEFFEIPMKILPNVRSSSEIY 240
Query: 859 GLMKAGALEGVPISGCLGDQSAALVGQMCFQDGQAKNTYGTGCFLLCNTGRKCVFSEHGL 1038
GLMKAGALEGVPISGCLGDQSAALVGQMCFQDGQAKNTYGTGCFLLCNTGRKCVFSEHGL
Sbjct: 241 GLMKAGALEGVPISGCLGDQSAALVGQMCFQDGQAKNTYGTGCFLLCNTGRKCVFSEHGL 300
Query: 1039 LTTVAYKLGRDKPVYYALEGSVAIAGAVVRWLRDNLGIIKTSEEIEKLAKEVGTSYGCYF 1218
LTTVAYKLGRDKPVYYALEGSVAIAGAVVRWLRDNLGIIKTSEEIEKLAKEVGTSYGCYF
Sbjct: 301 LTTVAYKLGRDKPVYYALEGSVAIAGAVVRWLRDNLGIIKTSEEIEKLAKEVGTSYGCYF 360
Query: 1219 VPAFSGLYAPYWEPSARGIICGLTQFTNRCHIAFAALEAVCFQTREILDAMNRDCGMPLR 1398
VPAFSGLYAPYWEPSARGIICGLTQFTNRCHIAFAALEAVCFQTREILDAMNRDCGMPLR
Sbjct: 361 VPAFSGLYAPYWEPSARGIICGLTQFTNRCHIAFAALEAVCFQTREILDAMNRDCGMPLR 420
Query: 1399 HLXVDGGMTNNKILMQLQADILYIPVVKPSMPXNTXXXXXXXXXXXEXVGVWSLDP*XLS 1578
HL VDGGMTNNKILMQLQADILYIPVVKPSMP T E VGVWSLDP LS
Sbjct: 421 HLQVDGGMTNNKILMQLQADILYIPVVKPSMPETTALGAAMAAGAAEGVGVWSLDPEDLS 480
Query: 1579 AVTVERFEPSDHAEESEIRXSTXKKALMXSMGWXT 1683
AVTVERFEP +AEESEIR ST KKA+M SMGW T
Sbjct: 481 AVTVERFEPQINAEESEIRYSTWKKAVMKSMGWVT 515
>ref|XP_003133723.1| PREDICTED: glycerol kinase-like [Sus scrofa].
Length = 553
Score = 944 bits (2441), Expect = 0.0
Identities = 466/515 (90%), Positives = 481/515 (93%)
Frame = +1
Query: 139 MAAANKAVLGPLVGAVDQGTSSTRFLVFNSKTAELLSHHQVELKQEFPKEGWVEQDPKEI 318
MAA+ KAVLGPLVGAVDQGTSSTRFLVFNSKTAELLSHHQVE++Q+FPKEGWVEQDPKEI
Sbjct: 1 MAASKKAVLGPLVGAVDQGTSSTRFLVFNSKTAELLSHHQVEIEQKFPKEGWVEQDPKEI 60
Query: 319 LNSVYECIEKTCEKLGQLNIDISNIKAIGVSNQRETTVVWDKLTGEPLYNAVVWLDLRTQ 498
L SVYECIEKTCEKLGQLNIDISNIKAIGVSNQRETTVVWDKLTGEPLYNAVVWLDLRTQ
Sbjct: 61 LQSVYECIEKTCEKLGQLNIDISNIKAIGVSNQRETTVVWDKLTGEPLYNAVVWLDLRTQ 120
Query: 499 STVENLSKRIPGNNNFVKSKTGLPLSTYFSAVKLRWLLDNVRKVQKAVEEERALFGTVDS 678
STV NLSK IP NNNFVK+KTGLPLSTYFSAVKLRWLLDNVRK+QKAVEE+RALFGT+DS
Sbjct: 121 STVANLSKIIPVNNNFVKTKTGLPLSTYFSAVKLRWLLDNVRKIQKAVEEDRALFGTIDS 180
Query: 679 WLIWCLTGGANGGVHCTDVTNASRTMLFNIHSLEWDKELCEFFEIPMKILPNVRSSSEIY 858
WLIW LTGGA GGVHCTDVTNASRTMLFNIHSLEWDKELCEFFE+PMKILPNVRSSSEIY
Sbjct: 181 WLIWSLTGGARGGVHCTDVTNASRTMLFNIHSLEWDKELCEFFEVPMKILPNVRSSSEIY 240
Query: 859 GLMKAGALEGVPISGCLGDQSAALVGQMCFQDGQAKNTYGTGCFLLCNTGRKCVFSEHGL 1038
GLMKAGALEGVPISGCLGDQSAALVGQMCFQDGQAKNTYGTGCFLLCNTG KCVFSEHGL
Sbjct: 241 GLMKAGALEGVPISGCLGDQSAALVGQMCFQDGQAKNTYGTGCFLLCNTGHKCVFSEHGL 300
Query: 1039 LTTVAYKLGRDKPVYYALEGSVAIAGAVVRWLRDNLGIIKTSEEIEKLAKEVGTSYGCYF 1218
LTTVAYKLGRDKPVYYALEGSVAIAGAVVRWLRDNLGIIKTSEEIEKLAKEVGTSYGCYF
Sbjct: 301 LTTVAYKLGRDKPVYYALEGSVAIAGAVVRWLRDNLGIIKTSEEIEKLAKEVGTSYGCYF 360
Query: 1219 VPAFSGLYAPYWEPSARGIICGLTQFTNRCHIAFAALEAVCFQTREILDAMNRDCGMPLR 1398
VPAFSGLYAPYWEPSARGIICGLTQFTN+CHIAFAALEAVCFQTREILDAMNRDCG+PL
Sbjct: 361 VPAFSGLYAPYWEPSARGIICGLTQFTNKCHIAFAALEAVCFQTREILDAMNRDCGIPLS 420
Query: 1399 HLXVDGGMTNNKILMQLQADILYIPVVKPSMPXNTXXXXXXXXXXXEXVGVWSLDP*XLS 1578
HL VDGGMTNNKILMQLQADILYIPVVKPSMP T E VGVWSL P LS
Sbjct: 421 HLQVDGGMTNNKILMQLQADILYIPVVKPSMPETTALGAAMAAGAAEGVGVWSLKPEDLS 480
Query: 1579 AVTVERFEPSDHAEESEIRXSTXKKALMXSMGWXT 1683
AVT+ERFEP +A+ESEIR ST KKA+ SMGW T
Sbjct: 481 AVTMERFEPQINAKESEIRYSTWKKAVKKSMGWVT 515
>ref|XP_003129421.2| PREDICTED: glycerol kinase 2-like [Sus scrofa].
Length = 553
Score = 868 bits (2243), Expect = 0.0
Identities = 424/515 (82%), Positives = 458/515 (88%)
Frame = +1
Query: 139 MAAANKAVLGPLVGAVDQGTSSTRFLVFNSKTAELLSHHQVELKQEFPKEGWVEQDPKEI 318
MAA +GPLVGAV QGT+ST F+VFNSKTAELLSHHQVEL Q FPKEGWVEQDPK I
Sbjct: 1 MAAPKTTGVGPLVGAVVQGTNSTHFMVFNSKTAELLSHHQVELTQVFPKEGWVEQDPKLI 60
Query: 319 LNSVYECIEKTCEKLGQLNIDISNIKAIGVSNQRETTVVWDKLTGEPLYNAVVWLDLRTQ 498
L SVYECIE+TCEKL +L++D+SNIKA+GVSNQRETTVVWD+LTGEPLYNAVVWLDLRTQ
Sbjct: 61 LQSVYECIERTCEKLEELHVDLSNIKAVGVSNQRETTVVWDRLTGEPLYNAVVWLDLRTQ 120
Query: 499 STVENLSKRIPGNNNFVKSKTGLPLSTYFSAVKLRWLLDNVRKVQKAVEEERALFGTVDS 678
STVE LSK+IPGNNNFVKSKTGLPLSTYFSAVKLRWLLDNV +VQKAV E RALFGT+DS
Sbjct: 121 STVELLSKKIPGNNNFVKSKTGLPLSTYFSAVKLRWLLDNVSQVQKAVREGRALFGTIDS 180
Query: 679 WLIWCLTGGANGGVHCTDVTNASRTMLFNIHSLEWDKELCEFFEIPMKILPNVRSSSEIY 858
WLIW +TGGA+GG+HCTDVTNASRTMLFNIHSL+WDKELC+FFEIPM ILP+V SSSEIY
Sbjct: 181 WLIWSMTGGAHGGIHCTDVTNASRTMLFNIHSLQWDKELCDFFEIPMGILPDVWSSSEIY 240
Query: 859 GLMKAGALEGVPISGCLGDQSAALVGQMCFQDGQAKNTYGTGCFLLCNTGRKCVFSEHGL 1038
GLMK GALEGVPISGCLGDQSAALVGQMCFQ+GQAKNTYGTGCFLLCNTG KCVFSEHGL
Sbjct: 241 GLMKTGALEGVPISGCLGDQSAALVGQMCFQEGQAKNTYGTGCFLLCNTGHKCVFSEHGL 300
Query: 1039 LTTVAYKLGRDKPVYYALEGSVAIAGAVVRWLRDNLGIIKTSEEIEKLAKEVGTSYGCYF 1218
LTTVAYKLG+D+PV YALEGSVAIAGAV+RWLRDNLGIIKTSEE EKLAKEVGTSYGCYF
Sbjct: 301 LTTVAYKLGKDQPVCYALEGSVAIAGAVIRWLRDNLGIIKTSEESEKLAKEVGTSYGCYF 360
Query: 1219 VPAFSGLYAPYWEPSARGIICGLTQFTNRCHIAFAALEAVCFQTREILDAMNRDCGMPLR 1398
+PAFSGLYAPYWEP+ARGIICGLTQFTN+ HIAFAALEA+CFQTREILDAMNRDCG+PL
Sbjct: 361 IPAFSGLYAPYWEPTARGIICGLTQFTNKSHIAFAALEAICFQTREILDAMNRDCGIPLN 420
Query: 1399 HLXVDGGMTNNKILMQLQADILYIPVVKPSMPXNTXXXXXXXXXXXEXVGVWSLDP*XLS 1578
HL VDGGMT NK+LMQLQADIL+IPV++ SMP T V VWSL P LS
Sbjct: 421 HLQVDGGMTTNKVLMQLQADILHIPVIRASMPETTALGAAMAAGAAHGVDVWSLKPEDLS 480
Query: 1579 AVTVERFEPSDHAEESEIRXSTXKKALMXSMGWXT 1683
V +ERFEP A ESEIR ST KKA+M SMGW T
Sbjct: 481 TVMMERFEPQIKATESEIRYSTWKKAVMKSMGWVT 515
>ref|XP_003132504.2| PREDICTED: putative glycerol kinase 5-like [Sus scrofa].
Length = 606
Score = 239 bits (609), Expect = 4e-63
Identities = 146/452 (32%), Positives = 241/452 (53%), Gaps = 15/452 (3%)
Frame = +1
Query: 175 VGAVDQGTSSTRFLVFNSKTAELLSHHQVELKQEFPKEGWVEQDPKEILNSVYECIEKTC 354
V +D G+S R V++ + A + +++ +P+ GWVE DP + I+++
Sbjct: 26 VTGLDVGSSVIRCHVYD-RAARICGSSAQKVESLYPQTGWVEIDPDVLWLQFVAVIKESV 84
Query: 355 EKLGQLNIDISNIKAIGVSNQRETTVVWDKLTGEPLYNAVVWLDLRTQSTVEN-----LS 519
+ G I+++ I +G+S QR T + WDK TG+ +N + W DLR V++ L
Sbjct: 85 KAAG---IEMNQIVGLGISTQRGTFLTWDKKTGKHFHNFISWQDLRAVELVKSWNSSLLM 141
Query: 520 KRIPGN----NNFVKSKTGLPLS-----TYFSAVKLRWLLDNVRKVQKAVEEERALFGTV 672
K I + + F +SK L S T +++L W+L N+ +VQKA++EE FGTV
Sbjct: 142 KLIHSSCRVLHFFTRSKRFLAASLFTFTTQHVSLRLAWILQNLTEVQKAIQEENCCFGTV 201
Query: 673 DSWLIWCLTGGANGGVHCTDVTNASRTMLFNIHSLEWDKELCEFFEIPMKILPNVRSSSE 852
D+WL+ LT G+ TD +NAS T LF+ + + W K + IP+ +LP VR +S
Sbjct: 202 DTWLLHKLTKGSE---FATDFSNASTTGLFDPYEMCWSKLITSLLSIPLSLLPPVRDTSH 258
Query: 853 IYGLMKAGALE-GVPISGCLGDQSAALVGQMCFQDGQAKNTYGTGCFLLCNTGRKCVFSE 1029
YG + +PI + DQ +A+ G+ CFQ G K T G+G FL NTG S
Sbjct: 259 NYGSVDEEIFGVPIPIVALVADQQSAMFGECCFQTGDVKLTMGSGTFLDINTGNNPHQSV 318
Query: 1030 HGLLTTVAYKLGRDKPVYYALEGSVAIAGAVVRWLRDNLGIIKTSEEIEKLAKEVGTSYG 1209
G + +K+G++ V EG+ G ++W + LG+ + E EK+A+ + S
Sbjct: 319 GGFYPLIGWKIGQE--VVCLAEGNAGDTGTAIQWAQ-KLGLFTDAAETEKMARSLEDSE- 374
Query: 1210 CYFVPAFSGLYAPYWEPSARGIICGLTQFTNRCHIAFAALEAVCFQTREILDAMNRDCGM 1389
YFVP+FSGL AP +P + GL T + H+ A LE++ F+ +++ + M ++ +
Sbjct: 375 VYFVPSFSGLQAPLNDPCTCASLMGLKPSTTKYHLVRAILESIAFRNKQLYEVMQKEIHI 434
Query: 1390 PLRHLXVDGGMTNNKILMQLQADILYIPVVKP 1485
P+ + DGG+ N +MQ+ +D++ + +P
Sbjct: 435 PITKIRADGGVCKNSFVMQMTSDLINETIDRP 466
Database: RefSeq49_SP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 11,343,932
Number of sequences in database: 24,897
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 24897
Number of Hits to DB: 37,340,111
Number of extensions: 911264
Number of successful extensions: 2653
Number of sequences better than 1.0e-05: 4
Number of HSP's gapped: 2643
Number of HSP's successfully gapped: 4
Length of query: 561
Length of database: 11,343,932
Length adjustment: 104
Effective length of query: 457
Effective length of database: 8,754,644
Effective search space: 4000872308
Effective search space used: 4000872308
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to RefSeqMP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-013265
(1683 letters)
Database: RefSeq49_MP.fasta
30,036 sequences; 15,617,559 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_032220.1| glycerol kinase isoform 1 [Mus musculus]. 947 0.0
Alignment gi|NP_997609.1| glycerol kinase isoform 2 [Mus musculus]. 947 0.0
Alignment gi|NP_034424.1| glycerol kinase 2 [Mus musculus]. 865 0.0
Alignment gi|NP_034423.2| glycerol kinase-like 1 [Mus musculus]. 841 0.0
Alignment gi|NP_796326.1| putative glycerol kinase 5 [Mus musculus]. 246 5e-65
Alignment gi|NP_001106883.1| FGGY carbohydrate kinase domain-containing p... 57 6e-08
>ref|NP_032220.1| glycerol kinase isoform 1 [Mus musculus].
Length = 524
Score = 947 bits (2449), Expect = 0.0
Identities = 466/515 (90%), Positives = 484/515 (93%)
Frame = +1
Query: 139 MAAANKAVLGPLVGAVDQGTSSTRFLVFNSKTAELLSHHQVELKQEFPKEGWVEQDPKEI 318
MAAA KAVLGPLVGAVDQGTSSTRFLVFNSKTAELLSHHQVE+KQEFP+EGWVEQDPKEI
Sbjct: 1 MAAAKKAVLGPLVGAVDQGTSSTRFLVFNSKTAELLSHHQVEIKQEFPREGWVEQDPKEI 60
Query: 319 LNSVYECIEKTCEKLGQLNIDISNIKAIGVSNQRETTVVWDKLTGEPLYNAVVWLDLRTQ 498
L SVYECIEKTCEKLGQLNIDISNIKAIGVSNQRETTVVWDK+TGEPLYNAVVWLDLRTQ
Sbjct: 61 LQSVYECIEKTCEKLGQLNIDISNIKAIGVSNQRETTVVWDKVTGEPLYNAVVWLDLRTQ 120
Query: 499 STVENLSKRIPGNNNFVKSKTGLPLSTYFSAVKLRWLLDNVRKVQKAVEEERALFGTVDS 678
STVENLSKRIPGNNNFVKSKTGLPLSTYFSAVKLRWLLDNV+KVQ+AVEE RALFGT+DS
Sbjct: 121 STVENLSKRIPGNNNFVKSKTGLPLSTYFSAVKLRWLLDNVKKVQEAVEENRALFGTIDS 180
Query: 679 WLIWCLTGGANGGVHCTDVTNASRTMLFNIHSLEWDKELCEFFEIPMKILPNVRSSSEIY 858
WLIW LTGG +GGVHCTDVTNASRTMLFNIHSLEWDKELCEFF IPM+ILPNVRSSSEIY
Sbjct: 181 WLIWSLTGGIHGGVHCTDVTNASRTMLFNIHSLEWDKELCEFFGIPMEILPNVRSSSEIY 240
Query: 859 GLMKAGALEGVPISGCLGDQSAALVGQMCFQDGQAKNTYGTGCFLLCNTGRKCVFSEHGL 1038
GLMKAGALEGVPISGCLGDQSAALVGQMCFQDGQAKNTYGTGCFLLCNTG KCVFSEHGL
Sbjct: 241 GLMKAGALEGVPISGCLGDQSAALVGQMCFQDGQAKNTYGTGCFLLCNTGHKCVFSEHGL 300
Query: 1039 LTTVAYKLGRDKPVYYALEGSVAIAGAVVRWLRDNLGIIKTSEEIEKLAKEVGTSYGCYF 1218
LTTVAYKLGRDKPVYYALEGSVAIAGAV+RWLRDNLGIIK+SEEIEKLAKEVGTSYGCYF
Sbjct: 301 LTTVAYKLGRDKPVYYALEGSVAIAGAVIRWLRDNLGIIKSSEEIEKLAKEVGTSYGCYF 360
Query: 1219 VPAFSGLYAPYWEPSARGIICGLTQFTNRCHIAFAALEAVCFQTREILDAMNRDCGMPLR 1398
VPAFSGLYAPYWEPSARGIICGLTQFTN+CHIAFAALEAVCFQTREILDAMNRDCG+PL
Sbjct: 361 VPAFSGLYAPYWEPSARGIICGLTQFTNKCHIAFAALEAVCFQTREILDAMNRDCGIPLS 420
Query: 1399 HLXVDGGMTNNKILMQLQADILYIPVVKPSMPXNTXXXXXXXXXXXEXVGVWSLDP*XLS 1578
HL VDGGMT+NKILMQLQADILYIPVVKPSMP T E VGVWSL+P LS
Sbjct: 421 HLQVDGGMTSNKILMQLQADILYIPVVKPSMPETTALGAAMAAGAAEGVGVWSLEPEDLS 480
Query: 1579 AVTVERFEPSDHAEESEIRXSTXKKALMXSMGWXT 1683
AVT+ERFEP +AEESEIR ST KKA+M S+GW T
Sbjct: 481 AVTMERFEPQINAEESEIRYSTWKKAVMKSIGWVT 515
>ref|NP_997609.1| glycerol kinase isoform 2 [Mus musculus].
Length = 553
Score = 947 bits (2449), Expect = 0.0
Identities = 466/515 (90%), Positives = 484/515 (93%)
Frame = +1
Query: 139 MAAANKAVLGPLVGAVDQGTSSTRFLVFNSKTAELLSHHQVELKQEFPKEGWVEQDPKEI 318
MAAA KAVLGPLVGAVDQGTSSTRFLVFNSKTAELLSHHQVE+KQEFP+EGWVEQDPKEI
Sbjct: 1 MAAAKKAVLGPLVGAVDQGTSSTRFLVFNSKTAELLSHHQVEIKQEFPREGWVEQDPKEI 60
Query: 319 LNSVYECIEKTCEKLGQLNIDISNIKAIGVSNQRETTVVWDKLTGEPLYNAVVWLDLRTQ 498
L SVYECIEKTCEKLGQLNIDISNIKAIGVSNQRETTVVWDK+TGEPLYNAVVWLDLRTQ
Sbjct: 61 LQSVYECIEKTCEKLGQLNIDISNIKAIGVSNQRETTVVWDKVTGEPLYNAVVWLDLRTQ 120
Query: 499 STVENLSKRIPGNNNFVKSKTGLPLSTYFSAVKLRWLLDNVRKVQKAVEEERALFGTVDS 678
STVENLSKRIPGNNNFVKSKTGLPLSTYFSAVKLRWLLDNV+KVQ+AVEE RALFGT+DS
Sbjct: 121 STVENLSKRIPGNNNFVKSKTGLPLSTYFSAVKLRWLLDNVKKVQEAVEENRALFGTIDS 180
Query: 679 WLIWCLTGGANGGVHCTDVTNASRTMLFNIHSLEWDKELCEFFEIPMKILPNVRSSSEIY 858
WLIW LTGG +GGVHCTDVTNASRTMLFNIHSLEWDKELCEFF IPM+ILPNVRSSSEIY
Sbjct: 181 WLIWSLTGGIHGGVHCTDVTNASRTMLFNIHSLEWDKELCEFFGIPMEILPNVRSSSEIY 240
Query: 859 GLMKAGALEGVPISGCLGDQSAALVGQMCFQDGQAKNTYGTGCFLLCNTGRKCVFSEHGL 1038
GLMKAGALEGVPISGCLGDQSAALVGQMCFQDGQAKNTYGTGCFLLCNTG KCVFSEHGL
Sbjct: 241 GLMKAGALEGVPISGCLGDQSAALVGQMCFQDGQAKNTYGTGCFLLCNTGHKCVFSEHGL 300
Query: 1039 LTTVAYKLGRDKPVYYALEGSVAIAGAVVRWLRDNLGIIKTSEEIEKLAKEVGTSYGCYF 1218
LTTVAYKLGRDKPVYYALEGSVAIAGAV+RWLRDNLGIIK+SEEIEKLAKEVGTSYGCYF
Sbjct: 301 LTTVAYKLGRDKPVYYALEGSVAIAGAVIRWLRDNLGIIKSSEEIEKLAKEVGTSYGCYF 360
Query: 1219 VPAFSGLYAPYWEPSARGIICGLTQFTNRCHIAFAALEAVCFQTREILDAMNRDCGMPLR 1398
VPAFSGLYAPYWEPSARGIICGLTQFTN+CHIAFAALEAVCFQTREILDAMNRDCG+PL
Sbjct: 361 VPAFSGLYAPYWEPSARGIICGLTQFTNKCHIAFAALEAVCFQTREILDAMNRDCGIPLS 420
Query: 1399 HLXVDGGMTNNKILMQLQADILYIPVVKPSMPXNTXXXXXXXXXXXEXVGVWSLDP*XLS 1578
HL VDGGMT+NKILMQLQADILYIPVVKPSMP T E VGVWSL+P LS
Sbjct: 421 HLQVDGGMTSNKILMQLQADILYIPVVKPSMPETTALGAAMAAGAAEGVGVWSLEPEDLS 480
Query: 1579 AVTVERFEPSDHAEESEIRXSTXKKALMXSMGWXT 1683
AVT+ERFEP +AEESEIR ST KKA+M S+GW T
Sbjct: 481 AVTMERFEPQINAEESEIRYSTWKKAVMKSIGWVT 515
>ref|NP_034424.1| glycerol kinase 2 [Mus musculus].
Length = 554
Score = 865 bits (2236), Expect = 0.0
Identities = 417/515 (80%), Positives = 457/515 (88%)
Frame = +1
Query: 139 MAAANKAVLGPLVGAVDQGTSSTRFLVFNSKTAELLSHHQVELKQEFPKEGWVEQDPKEI 318
MAA+ + GPLVGAV QGT+STRFLVFNSKTAEL+ HQVEL QE+PKEGWVEQDPKEI
Sbjct: 1 MAASKQTSAGPLVGAVVQGTNSTRFLVFNSKTAELVCSHQVELTQEYPKEGWVEQDPKEI 60
Query: 319 LNSVYECIEKTCEKLGQLNIDISNIKAIGVSNQRETTVVWDKLTGEPLYNAVVWLDLRTQ 498
L SVYECI K CEKL ++NIDISNIKAIGVSNQRETTVVWDK TG+PLYNAVVWLDLRTQ
Sbjct: 61 LKSVYECIAKACEKLAEVNIDISNIKAIGVSNQRETTVVWDKFTGDPLYNAVVWLDLRTQ 120
Query: 499 STVENLSKRIPGNNNFVKSKTGLPLSTYFSAVKLRWLLDNVRKVQKAVEEERALFGTVDS 678
STVE L+K+IPGN+NFVKSKTGLPLSTYFSAVKLRW+LDN+R +QKAVEE RA+FGT+DS
Sbjct: 121 STVETLTKKIPGNSNFVKSKTGLPLSTYFSAVKLRWMLDNLRPIQKAVEEGRAMFGTIDS 180
Query: 679 WLIWCLTGGANGGVHCTDVTNASRTMLFNIHSLEWDKELCEFFEIPMKILPNVRSSSEIY 858
WLIWC+TGG NGG+HCTDVTNA RTMLFNIHSLEWDK+LC+FFEIPM ILPNV SSSEIY
Sbjct: 181 WLIWCMTGGVNGGIHCTDVTNACRTMLFNIHSLEWDKDLCDFFEIPMSILPNVCSSSEIY 240
Query: 859 GLMKAGALEGVPISGCLGDQSAALVGQMCFQDGQAKNTYGTGCFLLCNTGRKCVFSEHGL 1038
GLM +GALEGVPISGCLGDQSAALVGQMCF +GQAKNTYGTGCFLLCNTG+KCVFSEHGL
Sbjct: 241 GLMTSGALEGVPISGCLGDQSAALVGQMCFHEGQAKNTYGTGCFLLCNTGQKCVFSEHGL 300
Query: 1039 LTTVAYKLGRDKPVYYALEGSVAIAGAVVRWLRDNLGIIKTSEEIEKLAKEVGTSYGCYF 1218
LTT+AYKLG++KPV+YALEGSVAIAGAV+RWLRDN II TS E+E LA+EVGTSYGCYF
Sbjct: 301 LTTLAYKLGKNKPVFYALEGSVAIAGAVIRWLRDNFEIITTSGEVENLAREVGTSYGCYF 360
Query: 1219 VPAFSGLYAPYWEPSARGIICGLTQFTNRCHIAFAALEAVCFQTREILDAMNRDCGMPLR 1398
VPAFSGLYAPYWEPSARGIICGLTQFTN+CHIAFAALEAVCFQTREILDAMNRDCG+PL
Sbjct: 361 VPAFSGLYAPYWEPSARGIICGLTQFTNKCHIAFAALEAVCFQTREILDAMNRDCGIPLS 420
Query: 1399 HLXVDGGMTNNKILMQLQADILYIPVVKPSMPXNTXXXXXXXXXXXEXVGVWSLDP*XLS 1578
HL VDGGMTNN+ILMQLQADIL+IPVVK MP T E V VWSL+P LS
Sbjct: 421 HLQVDGGMTNNRILMQLQADILHIPVVKSVMPETTALGAAMAAGAAEGVNVWSLEPEDLS 480
Query: 1579 AVTVERFEPSDHAEESEIRXSTXKKALMXSMGWXT 1683
+ +ER+EP A ESEIR ST K+A+M SMGW T
Sbjct: 481 TILMERYEPQIQATESEIRFSTWKRAVMKSMGWVT 515
>ref|NP_034423.2| glycerol kinase-like 1 [Mus musculus].
Length = 549
Score = 841 bits (2173), Expect = 0.0
Identities = 408/513 (79%), Positives = 453/513 (88%)
Frame = +1
Query: 139 MAAANKAVLGPLVGAVDQGTSSTRFLVFNSKTAELLSHHQVELKQEFPKEGWVEQDPKEI 318
MA A KAVLGPLVGAVDQGTSSTRFLVFN +TAELL HHQVE+ QEFPKEGWVEQDPK I
Sbjct: 1 MAEAPKAVLGPLVGAVDQGTSSTRFLVFNPQTAELLCHHQVEIAQEFPKEGWVEQDPKAI 60
Query: 319 LNSVYECIEKTCEKLGQLNIDISNIKAIGVSNQRETTVVWDKLTGEPLYNAVVWLDLRTQ 498
L SVYECIEK CEKLGQ +IDISNIKAIGV+NQRETT+VWDK TGEPLYNAVVWLDLRTQ
Sbjct: 61 LQSVYECIEKACEKLGQQSIDISNIKAIGVTNQRETTIVWDKFTGEPLYNAVVWLDLRTQ 120
Query: 499 STVENLSKRIPGNNNFVKSKTGLPLSTYFSAVKLRWLLDNVRKVQKAVEEERALFGTVDS 678
STVENLSK I +NNFVK+KTGLP+STYFSAVKL WL++NVRKVQKA+E+ RA+FGTVDS
Sbjct: 121 STVENLSKSISVSNNFVKNKTGLPISTYFSAVKLHWLIENVRKVQKAIEDGRAIFGTVDS 180
Query: 679 WLIWCLTGGANGGVHCTDVTNASRTMLFNIHSLEWDKELCEFFEIPMKILPNVRSSSEIY 858
WLIWC+TGG NGGVHCTDV+NASRTMLFNIHSL+WD+ELC+FF IPM ILP +RSSSEIY
Sbjct: 181 WLIWCMTGGINGGVHCTDVSNASRTMLFNIHSLQWDEELCDFFGIPMTILPRIRSSSEIY 240
Query: 859 GLMKAGALEGVPISGCLGDQSAALVGQMCFQDGQAKNTYGTGCFLLCNTGRKCVFSEHGL 1038
GL+K+G LEGVPISGCLGDQSAALVGQ+C QDGQAK+TYGTGCFLLCNTG+KCV SEHGL
Sbjct: 241 GLVKSGVLEGVPISGCLGDQSAALVGQLCLQDGQAKSTYGTGCFLLCNTGQKCVNSEHGL 300
Query: 1039 LTTVAYKLGRDKPVYYALEGSVAIAGAVVRWLRDNLGIIKTSEEIEKLAKEVGTSYGCYF 1218
LTTVAY+LGR +PVYYALEGSVAIAGAVV W+++NL II++S EIEKLA+ GTSYGCYF
Sbjct: 301 LTTVAYQLGRQEPVYYALEGSVAIAGAVVSWIKNNLQIIQSSSEIEKLAEVAGTSYGCYF 360
Query: 1219 VPAFSGLYAPYWEPSARGIICGLTQFTNRCHIAFAALEAVCFQTREILDAMNRDCGMPLR 1398
VPAFSGLYAPYW+PSARGIICGLTQFTN+ HIAFAALEAVCFQTREILDAMN DCG+PL
Sbjct: 361 VPAFSGLYAPYWDPSARGIICGLTQFTNKFHIAFAALEAVCFQTREILDAMNSDCGIPLT 420
Query: 1399 HLXVDGGMTNNKILMQLQADILYIPVVKPSMPXNTXXXXXXXXXXXEXVGVWSLDP*XLS 1578
HL VDGGMT N++LMQLQADIL IPV+KP MP T E V VWSLDP LS
Sbjct: 421 HLQVDGGMTANRVLMQLQADILCIPVMKPFMPETTALGVAMAAGAAEGVSVWSLDPKDLS 480
Query: 1579 AVTVERFEPSDHAEESEIRXSTXKKALMXSMGW 1677
+V +E+FEP + EESE R +T KKA++ SMGW
Sbjct: 481 SVQMEKFEPQINVEESEGRYATWKKAVLKSMGW 513
>ref|NP_796326.1| putative glycerol kinase 5 [Mus musculus].
Length = 516
Score = 246 bits (627), Expect = 5e-65
Identities = 142/451 (31%), Positives = 245/451 (54%), Gaps = 16/451 (3%)
Frame = +1
Query: 184 VDQGTSSTRFLVFNSKTAELLSHHQVELKQEFPKEGWVEQDPKEILNSVYECIEKTCEKL 363
+D G++ R V++ +TA + +++ +P+ GWVE DP + I+ +
Sbjct: 29 LDVGSTVIRCHVYD-QTARVRGSSAQKVENVYPQPGWVEIDPDSLWAQFVAVIKDAVKAA 87
Query: 364 GQLNIDISNIKAIGVSNQRETTVVWDKLTGEPLYNAVVWLDLRTQSTVEN-----LSKRI 528
G + ++ I +G+S QR T + W+K TG +N + W DLR V++ + K +
Sbjct: 88 G---VQMNQIVGLGISTQRATFITWNKKTGHHFHNFISWQDLRAAELVKSWNNSLIMKLL 144
Query: 529 PGNNN----FVKSKTGLPLS-----TYFSAVKLRWLLDNVRKVQKAVEEERALFGTVDSW 681
G F +SK L +S T + ++L W+L N+ +V++AVEE+ FGT+D+W
Sbjct: 145 HGATRVLHFFSRSKVMLTVSRFNFSTQHATLRLTWILQNLSEVKRAVEEDNCCFGTIDTW 204
Query: 682 LIWCLTGGANGGVHCTDVTNASRTMLFNIHSLEWDKELCEFFEIPMKILPNVRSSSEIYG 861
L++ LT G++ + TD +NAS T F+ +++ W + + IP+ ILP V+ +S +G
Sbjct: 205 LLYKLTKGSS---YATDYSNASTTGFFDPYAMRWSRLITTMVSIPLSILPPVKDTSYNFG 261
Query: 862 LMKAGALEGVPIS--GCLGDQSAALVGQMCFQDGQAKNTYGTGCFLLCNTGRKCVFSEHG 1035
+ + GVPI +GDQ +A+ G+ CF+ G K T GTG FL NTG+ G
Sbjct: 262 SVDE-KIFGVPIPVVALVGDQQSAMFGECCFETGDVKLTMGTGTFLDINTGKNLQHVNGG 320
Query: 1036 LLTTVAYKLGRDKPVYYALEGSVAIAGAVVRWLRDNLGIIKTSEEIEKLAKEVGTSYGCY 1215
+ +K+G++ + EG+ G + W + L + + E EK+A + S G Y
Sbjct: 321 FYPLIGWKIGQE--LVCLAEGNAGDTGTAIMWAQ-KLDLFTDAAETEKMALSLEDSEGVY 377
Query: 1216 FVPAFSGLYAPYWEPSARGIICGLTQFTNRCHIAFAALEAVCFQTREILDAMNRDCGMPL 1395
FVP+FSGL AP +P A GL TN+ H+ A LE++ F+ +++ D + R+ +P+
Sbjct: 378 FVPSFSGLQAPLNDPCACASFMGLKHSTNKYHLVRAILESIAFRNKQLYDMLQREIQIPV 437
Query: 1396 RHLXVDGGMTNNKILMQLQADILYIPVVKPS 1488
++ DGG+ NN +MQ+ +D++ + +P+
Sbjct: 438 TNIRADGGVCNNAFVMQMTSDLINEKIDRPA 468
>ref|NP_001106883.1| FGGY carbohydrate kinase domain-containing protein isoform a [Mus
musculus].
Length = 552
Score = 56.6 bits (135), Expect = 6e-08
Identities = 113/496 (22%), Positives = 191/496 (38%), Gaps = 64/496 (12%)
Frame = +1
Query: 184 VDQGTSSTRFLVFNSKTAELLSHHQVELKQEFPKEGWVEQDPKEILNSVYECIEKTCEKL 363
+D GT S R + + + LL+ + +K+ P+ EQ ++I + C T E +
Sbjct: 16 IDVGTGSVRAALVDQRGL-LLAFAEQPIKKWEPQFNHHEQSSEDIWAA---CCLVTKEVV 71
Query: 364 GQLNIDISNIKAIGVSNQRETTVVWDKL--------TGEPLYNAVVWLDLRTQSTVENLS 519
ID I+ +G + + VV DK G+ N ++WLD R S V
Sbjct: 72 Q--GIDAHRIRGLGF-DATCSLVVLDKEFHPLPVNHEGDSSRNVIMWLDHRAVSQVH--- 125
Query: 520 KRIPGNNNFVKSKTGLPLSTYFSAVKLRWLLDNVRKVQKAVEEERALFGTVDSWLIWCLT 699
RI + V G +S A KL WL +N+R++ ++ F + +L W T
Sbjct: 126 -RINETKHRVLQYVGGVMSVEMQAPKLLWLKENLREI---CWDKAGHFFDLPDFLSWKAT 181
Query: 700 GGANGGVHCTDVTNASRTMLFNIHSLE--WDKELCEFFEIPMKILPNVRSSSEIY----- 858
G C+ V + +S E WD + + I N +
Sbjct: 182 -GVTARSLCSLVCKWT-------YSAEKGWDDSFWKMIGLEDLIDDNYSKIGNLVLLPGA 233
Query: 859 ----GLMKAGALE-----GVPISGCLGDQSAALVGQMCFQDGQAKNTYGTGCFLLCNTGR 1011
GL A E G+ ++ L D A +G + G +G C T R
Sbjct: 234 ALGIGLTPEAARELGLPSGIAVAASLIDAHAGGLGVI----GADVRGHGLTCEGQPVTSR 289
Query: 1012 KCVFS-----EHGLLTTVAYKLGRDKPVYYAL-------EGSVAIAGAVV---------- 1125
V G+ + G P Y A+ EG ++ G ++
Sbjct: 290 LAVICGTSSCHMGISKDPVFVPGVWGPYYSAMVPGFWLNEGGQSVTGKLIDHMVQGHPAF 349
Query: 1126 ---------------RWLRDNLGIIKTSEEIEKLAKEVGTSYGCYFVPAFSGLYAPYWEP 1260
+L +L +IK ++ + L ++ + P F G +P +
Sbjct: 350 PELQAKATARCQSIYAYLNSHLDLIKKAQPVGFLTVDL------HVWPDFHGNRSPLADL 403
Query: 1261 SARGIICGLTQFTNRCHIAF---AALEAVCFQTREILDAMNRDCGMPLRHLXVDGGMTNN 1431
+ +G++ GLT + +A A ++A+ F TR I++ M G L L + GG++ N
Sbjct: 404 TLKGMVTGLTLSQDLDDLAILYLATVQAIAFGTRFIIETMEA-AGHSLSTLFLCGGLSKN 462
Query: 1432 KILMQLQADILYIPVV 1479
+ +Q+ ADI +PVV
Sbjct: 463 PLFVQMHADITGMPVV 478
Database: RefSeq49_MP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 15,617,559
Number of sequences in database: 30,036
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 30036
Number of Hits to DB: 51,162,572
Number of extensions: 1254107
Number of successful extensions: 3514
Number of sequences better than 1.0e-05: 6
Number of HSP's gapped: 3504
Number of HSP's successfully gapped: 6
Length of query: 561
Length of database: 15,617,559
Length adjustment: 107
Effective length of query: 454
Effective length of database: 12,403,707
Effective search space: 5631282978
Effective search space used: 5631282978
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to RefSeqHP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-013265
(1683 letters)
Database: RefSeq49_HP.fasta
32,964 sequences; 18,297,164 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001121599.1| glycerol kinase isoform c [Homo sapiens]. 948 0.0
Alignment gi|NP_000158.1| glycerol kinase isoform b [Homo sapiens]. 948 0.0
Alignment gi|NP_001191948.1| glycerol kinase isoform d [Homo sapiens]. 941 0.0
Alignment gi|NP_976325.1| glycerol kinase isoform a [Homo sapiens]. 941 0.0
Alignment gi|NP_149991.2| glycerol kinase 2 [Homo sapiens]. 894 0.0
Alignment gi|NP_001034636.1| putative glycerol kinase 5 [Homo sapiens]. 240 3e-63
>ref|NP_001121599.1| glycerol kinase isoform c [Homo sapiens].
Length = 553
Score = 948 bits (2450), Expect = 0.0
Identities = 466/515 (90%), Positives = 485/515 (94%)
Frame = +1
Query: 139 MAAANKAVLGPLVGAVDQGTSSTRFLVFNSKTAELLSHHQVELKQEFPKEGWVEQDPKEI 318
MAA+ KAVLGPLVGAVDQGTSSTRFLVFNSKTAELLSHHQVE+KQEFP+EGWVEQDPKEI
Sbjct: 1 MAASKKAVLGPLVGAVDQGTSSTRFLVFNSKTAELLSHHQVEIKQEFPREGWVEQDPKEI 60
Query: 319 LNSVYECIEKTCEKLGQLNIDISNIKAIGVSNQRETTVVWDKLTGEPLYNAVVWLDLRTQ 498
L+SVYECIEKTCEKLGQLNIDISNIKAIGVSNQRETTVVWDK+TGEPLYNAVVWLDLRTQ
Sbjct: 61 LHSVYECIEKTCEKLGQLNIDISNIKAIGVSNQRETTVVWDKITGEPLYNAVVWLDLRTQ 120
Query: 499 STVENLSKRIPGNNNFVKSKTGLPLSTYFSAVKLRWLLDNVRKVQKAVEEERALFGTVDS 678
STVE+LSKRIPGNNNFVKSKTGLPLSTYFSAVKLRWLLDNVRKVQKAVEE+RALFGT+DS
Sbjct: 121 STVESLSKRIPGNNNFVKSKTGLPLSTYFSAVKLRWLLDNVRKVQKAVEEKRALFGTIDS 180
Query: 679 WLIWCLTGGANGGVHCTDVTNASRTMLFNIHSLEWDKELCEFFEIPMKILPNVRSSSEIY 858
WLIW LTGG NGGVHCTDVTNASRTMLFNIHSLEWDK+LCEFF IPM+ILPNVRSSSEIY
Sbjct: 181 WLIWSLTGGVNGGVHCTDVTNASRTMLFNIHSLEWDKQLCEFFGIPMEILPNVRSSSEIY 240
Query: 859 GLMKAGALEGVPISGCLGDQSAALVGQMCFQDGQAKNTYGTGCFLLCNTGRKCVFSEHGL 1038
GLMKAGALEGVPISGCLGDQSAALVGQMCFQ GQAKNTYGTGCFLLCNTG KCVFS+HGL
Sbjct: 241 GLMKAGALEGVPISGCLGDQSAALVGQMCFQIGQAKNTYGTGCFLLCNTGHKCVFSDHGL 300
Query: 1039 LTTVAYKLGRDKPVYYALEGSVAIAGAVVRWLRDNLGIIKTSEEIEKLAKEVGTSYGCYF 1218
LTTVAYKLGRDKPVYYALEGSVAIAGAV+RWLRDNLGIIKTSEEIEKLAKEVGTSYGCYF
Sbjct: 301 LTTVAYKLGRDKPVYYALEGSVAIAGAVIRWLRDNLGIIKTSEEIEKLAKEVGTSYGCYF 360
Query: 1219 VPAFSGLYAPYWEPSARGIICGLTQFTNRCHIAFAALEAVCFQTREILDAMNRDCGMPLR 1398
VPAFSGLYAPYWEPSARGIICGLTQFTN+CHIAFAALEAVCFQTREILDAMNRDCG+PL
Sbjct: 361 VPAFSGLYAPYWEPSARGIICGLTQFTNKCHIAFAALEAVCFQTREILDAMNRDCGIPLS 420
Query: 1399 HLXVDGGMTNNKILMQLQADILYIPVVKPSMPXNTXXXXXXXXXXXEXVGVWSLDP*XLS 1578
HL VDGGMT+NKILMQLQADILYIPVVKPSMP T E VGVWSL+P LS
Sbjct: 421 HLQVDGGMTSNKILMQLQADILYIPVVKPSMPETTALGAAMAAGAAEGVGVWSLEPEDLS 480
Query: 1579 AVTVERFEPSDHAEESEIRXSTXKKALMXSMGWXT 1683
AVT+ERFEP +AEESEIR ST KKA+M SMGW T
Sbjct: 481 AVTMERFEPQINAEESEIRYSTWKKAVMKSMGWVT 515
>ref|NP_000158.1| glycerol kinase isoform b [Homo sapiens].
Length = 524
Score = 948 bits (2450), Expect = 0.0
Identities = 466/515 (90%), Positives = 485/515 (94%)
Frame = +1
Query: 139 MAAANKAVLGPLVGAVDQGTSSTRFLVFNSKTAELLSHHQVELKQEFPKEGWVEQDPKEI 318
MAA+ KAVLGPLVGAVDQGTSSTRFLVFNSKTAELLSHHQVE+KQEFP+EGWVEQDPKEI
Sbjct: 1 MAASKKAVLGPLVGAVDQGTSSTRFLVFNSKTAELLSHHQVEIKQEFPREGWVEQDPKEI 60
Query: 319 LNSVYECIEKTCEKLGQLNIDISNIKAIGVSNQRETTVVWDKLTGEPLYNAVVWLDLRTQ 498
L+SVYECIEKTCEKLGQLNIDISNIKAIGVSNQRETTVVWDK+TGEPLYNAVVWLDLRTQ
Sbjct: 61 LHSVYECIEKTCEKLGQLNIDISNIKAIGVSNQRETTVVWDKITGEPLYNAVVWLDLRTQ 120
Query: 499 STVENLSKRIPGNNNFVKSKTGLPLSTYFSAVKLRWLLDNVRKVQKAVEEERALFGTVDS 678
STVE+LSKRIPGNNNFVKSKTGLPLSTYFSAVKLRWLLDNVRKVQKAVEE+RALFGT+DS
Sbjct: 121 STVESLSKRIPGNNNFVKSKTGLPLSTYFSAVKLRWLLDNVRKVQKAVEEKRALFGTIDS 180
Query: 679 WLIWCLTGGANGGVHCTDVTNASRTMLFNIHSLEWDKELCEFFEIPMKILPNVRSSSEIY 858
WLIW LTGG NGGVHCTDVTNASRTMLFNIHSLEWDK+LCEFF IPM+ILPNVRSSSEIY
Sbjct: 181 WLIWSLTGGVNGGVHCTDVTNASRTMLFNIHSLEWDKQLCEFFGIPMEILPNVRSSSEIY 240
Query: 859 GLMKAGALEGVPISGCLGDQSAALVGQMCFQDGQAKNTYGTGCFLLCNTGRKCVFSEHGL 1038
GLMKAGALEGVPISGCLGDQSAALVGQMCFQ GQAKNTYGTGCFLLCNTG KCVFS+HGL
Sbjct: 241 GLMKAGALEGVPISGCLGDQSAALVGQMCFQIGQAKNTYGTGCFLLCNTGHKCVFSDHGL 300
Query: 1039 LTTVAYKLGRDKPVYYALEGSVAIAGAVVRWLRDNLGIIKTSEEIEKLAKEVGTSYGCYF 1218
LTTVAYKLGRDKPVYYALEGSVAIAGAV+RWLRDNLGIIKTSEEIEKLAKEVGTSYGCYF
Sbjct: 301 LTTVAYKLGRDKPVYYALEGSVAIAGAVIRWLRDNLGIIKTSEEIEKLAKEVGTSYGCYF 360
Query: 1219 VPAFSGLYAPYWEPSARGIICGLTQFTNRCHIAFAALEAVCFQTREILDAMNRDCGMPLR 1398
VPAFSGLYAPYWEPSARGIICGLTQFTN+CHIAFAALEAVCFQTREILDAMNRDCG+PL
Sbjct: 361 VPAFSGLYAPYWEPSARGIICGLTQFTNKCHIAFAALEAVCFQTREILDAMNRDCGIPLS 420
Query: 1399 HLXVDGGMTNNKILMQLQADILYIPVVKPSMPXNTXXXXXXXXXXXEXVGVWSLDP*XLS 1578
HL VDGGMT+NKILMQLQADILYIPVVKPSMP T E VGVWSL+P LS
Sbjct: 421 HLQVDGGMTSNKILMQLQADILYIPVVKPSMPETTALGAAMAAGAAEGVGVWSLEPEDLS 480
Query: 1579 AVTVERFEPSDHAEESEIRXSTXKKALMXSMGWXT 1683
AVT+ERFEP +AEESEIR ST KKA+M SMGW T
Sbjct: 481 AVTMERFEPQINAEESEIRYSTWKKAVMKSMGWVT 515
>ref|NP_001191948.1| glycerol kinase isoform d [Homo sapiens].
Length = 559
Score = 941 bits (2433), Expect = 0.0
Identities = 466/521 (89%), Positives = 485/521 (93%), Gaps = 6/521 (1%)
Frame = +1
Query: 139 MAAANKAVLGPLVGAVDQGTSSTRFLVFNSKTAELLSHHQVELKQEFPKEGWVEQDPKEI 318
MAA+ KAVLGPLVGAVDQGTSSTRFLVFNSKTAELLSHHQVE+KQEFP+EGWVEQDPKEI
Sbjct: 1 MAASKKAVLGPLVGAVDQGTSSTRFLVFNSKTAELLSHHQVEIKQEFPREGWVEQDPKEI 60
Query: 319 LNSVYECIEKTCEKLGQLNIDISNIKAIGVSNQRETTVVWDKLTGEPLYNAVVWLDLRTQ 498
L+SVYECIEKTCEKLGQLNIDISNIKAIGVSNQRETTVVWDK+TGEPLYNAVVWLDLRTQ
Sbjct: 61 LHSVYECIEKTCEKLGQLNIDISNIKAIGVSNQRETTVVWDKITGEPLYNAVVWLDLRTQ 120
Query: 499 STVENLSKRIPGNNNFVKSKTGLPLSTYFSAVKLRWLLDNVRKVQKAVEEERALFGTVDS 678
STVE+LSKRIPGNNNFVKSKTGLPLSTYFSAVKLRWLLDNVRKVQKAVEE+RALFGT+DS
Sbjct: 121 STVESLSKRIPGNNNFVKSKTGLPLSTYFSAVKLRWLLDNVRKVQKAVEEKRALFGTIDS 180
Query: 679 WLIWCLTGGANGGVHCTDVTNASRTMLFNIHSLEWDKELCEFFEIPMKILPNVRSSSEIY 858
WLIW LTGG NGGVHCTDVTNASRTMLFNIHSLEWDK+LCEFF IPM+ILPNVRSSSEIY
Sbjct: 181 WLIWSLTGGVNGGVHCTDVTNASRTMLFNIHSLEWDKQLCEFFGIPMEILPNVRSSSEIY 240
Query: 859 GLMK------AGALEGVPISGCLGDQSAALVGQMCFQDGQAKNTYGTGCFLLCNTGRKCV 1020
GLMK AGALEGVPISGCLGDQSAALVGQMCFQ GQAKNTYGTGCFLLCNTG KCV
Sbjct: 241 GLMKISHSVKAGALEGVPISGCLGDQSAALVGQMCFQIGQAKNTYGTGCFLLCNTGHKCV 300
Query: 1021 FSEHGLLTTVAYKLGRDKPVYYALEGSVAIAGAVVRWLRDNLGIIKTSEEIEKLAKEVGT 1200
FS+HGLLTTVAYKLGRDKPVYYALEGSVAIAGAV+RWLRDNLGIIKTSEEIEKLAKEVGT
Sbjct: 301 FSDHGLLTTVAYKLGRDKPVYYALEGSVAIAGAVIRWLRDNLGIIKTSEEIEKLAKEVGT 360
Query: 1201 SYGCYFVPAFSGLYAPYWEPSARGIICGLTQFTNRCHIAFAALEAVCFQTREILDAMNRD 1380
SYGCYFVPAFSGLYAPYWEPSARGIICGLTQFTN+CHIAFAALEAVCFQTREILDAMNRD
Sbjct: 361 SYGCYFVPAFSGLYAPYWEPSARGIICGLTQFTNKCHIAFAALEAVCFQTREILDAMNRD 420
Query: 1381 CGMPLRHLXVDGGMTNNKILMQLQADILYIPVVKPSMPXNTXXXXXXXXXXXEXVGVWSL 1560
CG+PL HL VDGGMT+NKILMQLQADILYIPVVKPSMP T E VGVWSL
Sbjct: 421 CGIPLSHLQVDGGMTSNKILMQLQADILYIPVVKPSMPETTALGAAMAAGAAEGVGVWSL 480
Query: 1561 DP*XLSAVTVERFEPSDHAEESEIRXSTXKKALMXSMGWXT 1683
+P LSAVT+ERFEP +AEESEIR ST KKA+M SMGW T
Sbjct: 481 EPEDLSAVTMERFEPQINAEESEIRYSTWKKAVMKSMGWVT 521
>ref|NP_976325.1| glycerol kinase isoform a [Homo sapiens].
Length = 530
Score = 941 bits (2433), Expect = 0.0
Identities = 466/521 (89%), Positives = 485/521 (93%), Gaps = 6/521 (1%)
Frame = +1
Query: 139 MAAANKAVLGPLVGAVDQGTSSTRFLVFNSKTAELLSHHQVELKQEFPKEGWVEQDPKEI 318
MAA+ KAVLGPLVGAVDQGTSSTRFLVFNSKTAELLSHHQVE+KQEFP+EGWVEQDPKEI
Sbjct: 1 MAASKKAVLGPLVGAVDQGTSSTRFLVFNSKTAELLSHHQVEIKQEFPREGWVEQDPKEI 60
Query: 319 LNSVYECIEKTCEKLGQLNIDISNIKAIGVSNQRETTVVWDKLTGEPLYNAVVWLDLRTQ 498
L+SVYECIEKTCEKLGQLNIDISNIKAIGVSNQRETTVVWDK+TGEPLYNAVVWLDLRTQ
Sbjct: 61 LHSVYECIEKTCEKLGQLNIDISNIKAIGVSNQRETTVVWDKITGEPLYNAVVWLDLRTQ 120
Query: 499 STVENLSKRIPGNNNFVKSKTGLPLSTYFSAVKLRWLLDNVRKVQKAVEEERALFGTVDS 678
STVE+LSKRIPGNNNFVKSKTGLPLSTYFSAVKLRWLLDNVRKVQKAVEE+RALFGT+DS
Sbjct: 121 STVESLSKRIPGNNNFVKSKTGLPLSTYFSAVKLRWLLDNVRKVQKAVEEKRALFGTIDS 180
Query: 679 WLIWCLTGGANGGVHCTDVTNASRTMLFNIHSLEWDKELCEFFEIPMKILPNVRSSSEIY 858
WLIW LTGG NGGVHCTDVTNASRTMLFNIHSLEWDK+LCEFF IPM+ILPNVRSSSEIY
Sbjct: 181 WLIWSLTGGVNGGVHCTDVTNASRTMLFNIHSLEWDKQLCEFFGIPMEILPNVRSSSEIY 240
Query: 859 GLMK------AGALEGVPISGCLGDQSAALVGQMCFQDGQAKNTYGTGCFLLCNTGRKCV 1020
GLMK AGALEGVPISGCLGDQSAALVGQMCFQ GQAKNTYGTGCFLLCNTG KCV
Sbjct: 241 GLMKISHSVKAGALEGVPISGCLGDQSAALVGQMCFQIGQAKNTYGTGCFLLCNTGHKCV 300
Query: 1021 FSEHGLLTTVAYKLGRDKPVYYALEGSVAIAGAVVRWLRDNLGIIKTSEEIEKLAKEVGT 1200
FS+HGLLTTVAYKLGRDKPVYYALEGSVAIAGAV+RWLRDNLGIIKTSEEIEKLAKEVGT
Sbjct: 301 FSDHGLLTTVAYKLGRDKPVYYALEGSVAIAGAVIRWLRDNLGIIKTSEEIEKLAKEVGT 360
Query: 1201 SYGCYFVPAFSGLYAPYWEPSARGIICGLTQFTNRCHIAFAALEAVCFQTREILDAMNRD 1380
SYGCYFVPAFSGLYAPYWEPSARGIICGLTQFTN+CHIAFAALEAVCFQTREILDAMNRD
Sbjct: 361 SYGCYFVPAFSGLYAPYWEPSARGIICGLTQFTNKCHIAFAALEAVCFQTREILDAMNRD 420
Query: 1381 CGMPLRHLXVDGGMTNNKILMQLQADILYIPVVKPSMPXNTXXXXXXXXXXXEXVGVWSL 1560
CG+PL HL VDGGMT+NKILMQLQADILYIPVVKPSMP T E VGVWSL
Sbjct: 421 CGIPLSHLQVDGGMTSNKILMQLQADILYIPVVKPSMPETTALGAAMAAGAAEGVGVWSL 480
Query: 1561 DP*XLSAVTVERFEPSDHAEESEIRXSTXKKALMXSMGWXT 1683
+P LSAVT+ERFEP +AEESEIR ST KKA+M SMGW T
Sbjct: 481 EPEDLSAVTMERFEPQINAEESEIRYSTWKKAVMKSMGWVT 521
>ref|NP_149991.2| glycerol kinase 2 [Homo sapiens].
Length = 553
Score = 894 bits (2310), Expect = 0.0
Identities = 433/515 (84%), Positives = 467/515 (90%)
Frame = +1
Query: 139 MAAANKAVLGPLVGAVDQGTSSTRFLVFNSKTAELLSHHQVELKQEFPKEGWVEQDPKEI 318
MAA A +GPLVGAV QGT+STRFLVFNSKTAELLSHH+VEL QEFPKEGWVEQDPKEI
Sbjct: 1 MAAPKTAAVGPLVGAVVQGTNSTRFLVFNSKTAELLSHHKVELTQEFPKEGWVEQDPKEI 60
Query: 319 LNSVYECIEKTCEKLGQLNIDISNIKAIGVSNQRETTVVWDKLTGEPLYNAVVWLDLRTQ 498
L SVYECI +TCEKL +LNIDISNIKA+GVSNQRETTV+WDKLTGEPLYNAVVWLDLRTQ
Sbjct: 61 LQSVYECIARTCEKLDELNIDISNIKAVGVSNQRETTVIWDKLTGEPLYNAVVWLDLRTQ 120
Query: 499 STVENLSKRIPGNNNFVKSKTGLPLSTYFSAVKLRWLLDNVRKVQKAVEEERALFGTVDS 678
+TVE+LSK+IPGN+NFVKSKTGLPLSTYFSAVKLRW+LDNVR VQKAVEE RALFGT+DS
Sbjct: 121 TTVEDLSKKIPGNSNFVKSKTGLPLSTYFSAVKLRWMLDNVRNVQKAVEEGRALFGTIDS 180
Query: 679 WLIWCLTGGANGGVHCTDVTNASRTMLFNIHSLEWDKELCEFFEIPMKILPNVRSSSEIY 858
WLIW LTGG NGGVHCTDVTNASRTMLFNIHSLEWDKELC+FFEIPM +LPNV SSSEIY
Sbjct: 181 WLIWSLTGGVNGGVHCTDVTNASRTMLFNIHSLEWDKELCDFFEIPMDLLPNVFSSSEIY 240
Query: 859 GLMKAGALEGVPISGCLGDQSAALVGQMCFQDGQAKNTYGTGCFLLCNTGRKCVFSEHGL 1038
GL+K GALEGVPISGCLGDQ AALVGQMCFQ+GQAKNTYGTGCFLLCNTGRKCVFSEHGL
Sbjct: 241 GLIKTGALEGVPISGCLGDQCAALVGQMCFQEGQAKNTYGTGCFLLCNTGRKCVFSEHGL 300
Query: 1039 LTTVAYKLGRDKPVYYALEGSVAIAGAVVRWLRDNLGIIKTSEEIEKLAKEVGTSYGCYF 1218
LTTVAYKLGR+KP YYALEGSVAIAGAV+RWLRDNLGII+TS +IE+LAKEVGTSYGCYF
Sbjct: 301 LTTVAYKLGREKPAYYALEGSVAIAGAVIRWLRDNLGIIETSGDIERLAKEVGTSYGCYF 360
Query: 1219 VPAFSGLYAPYWEPSARGIICGLTQFTNRCHIAFAALEAVCFQTREILDAMNRDCGMPLR 1398
VPAFSGLYAPYWEPSARGI+CGLTQFTN+CHIAFAALEAVCFQTREIL+AMNRDCG+PLR
Sbjct: 361 VPAFSGLYAPYWEPSARGILCGLTQFTNKCHIAFAALEAVCFQTREILEAMNRDCGIPLR 420
Query: 1399 HLXVDGGMTNNKILMQLQADILYIPVVKPSMPXNTXXXXXXXXXXXEXVGVWSLDP*XLS 1578
HL VDGGMTNNK+LMQLQADIL+IPV+KP MP T E V VWSL+P LS
Sbjct: 421 HLQVDGGMTNNKVLMQLQADILHIPVIKPFMPETTALGAAMAAGAAEGVSVWSLEPQALS 480
Query: 1579 AVTVERFEPSDHAEESEIRXSTXKKALMXSMGWXT 1683
+ +ERFEP A ESEIR +T KKA+M SMGW T
Sbjct: 481 VLRMERFEPQIQATESEIRYATWKKAVMKSMGWVT 515
>ref|NP_001034636.1| putative glycerol kinase 5 [Homo sapiens].
Length = 529
Score = 240 bits (612), Expect = 3e-63
Identities = 155/515 (30%), Positives = 258/515 (50%), Gaps = 17/515 (3%)
Frame = +1
Query: 184 VDQGTSSTRFLVFNSKTAELLSHHQVELKQEFPKEGWVEQDPKEILNSVYECIEKTCEKL 363
+D G+S R V++ + A + +++ +P+ GWVE DP + I++ +
Sbjct: 24 LDVGSSVIRCHVYD-RAARVCGSSVQKVENLYPQIGWVEIDPDVLWIQFVAVIKEAVKAA 82
Query: 364 GQLNIDISNIKAIGVSNQRETTVVWDKLTGEPLYNAVVWLDLRTQSTVENLSKRIPGN-- 537
G I ++ I +G+S QR T + W+K TG +N + W DLR V++ + +
Sbjct: 83 G---IQMNQIVGLGISTQRATFITWNKKTGNHFHNFISWQDLRAVELVKSWNNSLLMKIF 139
Query: 538 -------NNFVKSKTGLPLS-----TYFSAVKLRWLLDNVRKVQKAVEEERALFGTVDSW 681
+ F +SK S T ++++L W+L N+ +VQKAVEEE FGT+D+W
Sbjct: 140 HSSCRVLHFFTRSKRLFTASLFTFTTQQTSLRLVWILQNLTEVQKAVEEENCCFGTIDTW 199
Query: 682 LIWCLTGGANGGVHCTDVTNASRTMLFNIHSLEWDKELCEFFEIPMKILPNVRSSSEIYG 861
L++ LT G V+ TD +NAS T LF+ + + W + IP+ +LP VR +S +G
Sbjct: 200 LLYKLT---KGSVYATDFSNASTTGLFDPYKMCWSGMITSLISIPLSLLPPVRDTSHNFG 256
Query: 862 LMKAGALE-GVPISGCLGDQSAALVGQMCFQDGQAKNTYGTGCFLLCNTGRKCVFSEHGL 1038
+ +PI + DQ +A+ G+ CFQ G K T GTG FL NTG + G
Sbjct: 257 SVDEEIFGVPIPIVALVADQQSAMFGECCFQTGDVKLTMGTGTFLDINTGNSLQQTTGGF 316
Query: 1039 LTTVAYKLGRDKPVYYALEGSVAIAGAVVRWLRDNLGIIKTSEEIEKLAKEVGTSYGCYF 1218
+ +K+G++ V E + G ++W + L + + E EK+AK + S G F
Sbjct: 317 YPLIGWKIGQE--VVCLAESNAGDTGTAIKWAQQ-LDLFTDAAETEKMAKSLEDSEGVCF 373
Query: 1219 VPAFSGLYAPYWEPSARGIICGLTQFTNRCHIAFAALEAVCFQTREILDAMNRDCGMPLR 1398
VP+FSGL AP +P A GL T++ H+ A LE++ F+ +++ + M ++ +P+R
Sbjct: 374 VPSFSGLQAPLNDPWACASFMGLKPSTSKYHLVRAILESIAFRNKQLYEMMKKEIHIPVR 433
Query: 1399 HLXVDGGMTNNKILMQLQADILYIPVVKPSMPXNTXXXXXXXXXXXEXVGVWSLDP*XLS 1578
+ DGG+ N +MQ+ +D++ + +P+ + VG W+ D L
Sbjct: 434 KIRADGGVCKNGFVMQMTSDLINENIDRPADIDMSCLGAASLAGL--AVGFWT-DKEELK 490
Query: 1579 AVTVER--FEPSDHAEESEIRXSTXKKALMXSMGW 1677
+ F+P +E E+ KA+ SM W
Sbjct: 491 KLRQSEVVFKPQKKCQEYEMSLENWAKAVKRSMNW 525
Database: RefSeq49_HP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,297,164
Number of sequences in database: 32,964
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 32964
Number of Hits to DB: 59,866,353
Number of extensions: 1469650
Number of successful extensions: 4387
Number of sequences better than 1.0e-05: 6
Number of HSP's gapped: 4374
Number of HSP's successfully gapped: 6
Length of query: 561
Length of database: 18,297,164
Length adjustment: 108
Effective length of query: 453
Effective length of database: 14,737,052
Effective search space: 6675884556
Effective search space used: 6675884556
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to Sscrofa10_2
BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-013265
(1683 letters)
Database: Sscrofa_10.2.fasta
4582 sequences; 2,808,509,378 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Sscrofa_Chr15 1955 0.0
Sscrofa_Chr08 1037 0.0
Sscrofa_ChrX 278 9e-72
>Sscrofa_Chr15
|| Length = 157681621
Score = 1955 bits (986), Expect = 0.0
Identities = 1314/1425 (92%)
Strand = Plus / Plus
Query: 135 tttcatggcagccgcgaataaagcagttttgggaccgttggtgggagcagtggaccaggg 194
||||||||||||| |||| ||||| |||||||| ||||||||||||||||||||||||||
Sbjct: 138071590 tttcatggcagcctcgaagaaagctgttttggggccgttggtgggagcagtggaccaggg 138071649
Query: 195 caccagctcgacgcgctttttggttttcaactcaaaaacagctgaactacttagtcatca 254
|||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||
Sbjct: 138071650 caccagctcgacgcgctttttggttttcaattcaaaaacagccgaactacttagtcatca 138071709
Query: 255 tcaagtagaactaaaacaagagtttccaaaagaaggatgggtggaacaggaccctaagga 314
|||||| ||| || ||||| | |||||||||||||| ||||||||||| |||||||||||
Sbjct: 138071710 tcaagtggaaatagaacaaaaatttccaaaagaagggtgggtggaacaagaccctaagga 138071769
Query: 315 aattctgaattctgtatatgagtgtatagagaaaacctgtgagaaacttggacagctcaa 374
||| ||| | || || |||||||||||||||||||| |||||||||||||| ||||||||
Sbjct: 138071770 aatcctgcagtccgtctatgagtgtatagagaaaacgtgtgagaaacttggtcagctcaa 138071829
Query: 375 tattgatatttccaacataaaagctatcggtgtcagtaaccagagggaaaccactgtggt 434
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 138071830 tattgatatttccaacataaaagctattggtgtcagtaaccagagggaaaccactgtggt 138071889
Query: 435 ctgggacaagttaactggagagcctctctacaatgccgtagtgtggcttgacctaagaac 494
||||||||||||||||||||| || ||||||||||| || ||||||||||| ||||||||
Sbjct: 138071890 ctgggacaagttaactggagaacccctctacaatgctgtggtgtggcttgatctaagaac 138071949
Query: 495 ccagtctaccgttgagaatcttagtaaaagaattcccggaaataataactttgtcaagtc 554
|||||||||||||| ||| |||||||||| ||||| | |||||||||||||||||| |
Sbjct: 138071950 ccagtctaccgttgcgaaccttagtaaaatcattccagtgaataataactttgtcaagac 138072009
Query: 555 caagacaggccttccacttagcacttatttcagtgcagtgaaacttcgttggctccttga 614
|||||||||||||||||| ||||| || |||||||||||||| |||||||||||||||||
Sbjct: 138072010 caagacaggccttccactcagcacgtacttcagtgcagtgaagcttcgttggctccttga 138072069
Query: 615 caatgtgagaaaagttcaaaaagcagttgaagaagagagagctctttttgggaccgttga 674
|||||||||||| ||||||| |||||||||||||| |||||||||||||||||| ||||
Sbjct: 138072070 taatgtgagaaaaattcaaaaggcagttgaagaagatagagctctttttgggaccattga 138072129
Query: 675 ttcatggcttatttggtgcttgacaggaggagccaatggaggtgtccattgtacagatgt 734
||| |||||||||||| |||||||||||||||||| |||||||| ||||||||||| ||
Sbjct: 138072130 ttcctggcttatttggagcttgacaggaggagccaggggaggtgttcattgtacagacgt 138072189
Query: 735 aacaaatgcaagcaggacgatgcttttcaacattcattctttggaatgggataaagaact 794
|||||||||||| ||||||||||| |||||||||||||||||||||||||||||||| ||
Sbjct: 138072190 aacaaatgcaagtaggacgatgctattcaacattcattctttggaatgggataaagagct 138072249
Query: 795 ctgcgaattttttgaaattccaatgaaaattcttccaaatgttcggagttcttctgagat 854
||| |||||||||||| |||||||||||||||| ||||| || |||||||||||||||||
Sbjct: 138072250 ctgtgaattttttgaagttccaatgaaaattctgccaaacgtccggagttcttctgagat 138072309
Query: 855 ctatggcctaatgaaagctggggccttggaaggtgtgccaatatccgggtgtttgggtga 914
||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||| ||
Sbjct: 138072310 ctatggcctaatgaaagctggggccttggaaggcgtgccaatatctgggtgtttgggaga 138072369
Query: 915 ccagtctgctgcattggtgggacaaatgtgcttccaggatggacaagccaaaaacacgta 974
|||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||
Sbjct: 138072370 ccagtctgctgcattggtgggacagatgtgcttccaggatggacaggccaaaaacacgta 138072429
Query: 975 tggaacaggctgtttcttattatgtaacactggccgtaagtgtgtattttctgaacatgg 1034
||||||||||||||||||| ||||||| || |||| |||||||| ||||||||||||||
Sbjct: 138072430 tggaacaggctgtttcttactatgtaatacaggccacaagtgtgtgttttctgaacatgg 138072489
Query: 1035 ccttctgactacagtggcttacaaacttggcagagacaaaccagtatattatgcattaga 1094
||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 138072490 ccttctgaccacagtggcttacaaacttggcagagacaaaccagtgtattatgcattaga 138072549
Query: 1095 aggttcggtagctatagctggtgctgttgttcgctggctaagagacaatcttggaattat 1154
||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 138072550 aggctcagtagctatagctggtgctgttgttcgctggctaagagacaatcttggaattat 138072609
Query: 1155 aaagacctctgaggaaattgaaaaacttgctaaagaagtaggtacttcttatggctgcta 1214
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 138072610 aaagacctcagaggaaattgaaaaacttgctaaagaagtaggtacttcttatggctgtta 138072669
Query: 1215 tttcgtcccagcgttttcagggctgtatgcaccatattgggagcctagtgcaagagggat 1274
||| |||||||| ||||||||||| |||||||| || |||||||| ||||||||||||||
Sbjct: 138072670 ttttgtcccagccttttcagggctatatgcaccttactgggagcccagtgcaagagggat 138072729
Query: 1275 catctgtgggcttactcagttcaccaatagatgccatattgcttttgctgcattggaagc 1334
|||||||||||| ||||| |||||||||| ||||||||||||||||||||| || |||||
Sbjct: 138072730 catctgtgggctcactcaattcaccaataaatgccatattgcttttgctgcgttagaagc 138072789
Query: 1335 tgtttgtttccaaacccgagagattttggatgccatgaaccgtgactgtggaatgccact 1394
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 138072790 tgtttgtttccaaacccgagagattttggatgccatgaaccgtgactgtggaattccact 138072849
Query: 1395 cagacacctgcangtagatggagggatgaccaacaacaaaattctcatgcagctccaagc 1454
||| || |||| |||||||| || |||||||||||||||||||| |||||||| |||||
Sbjct: 138072850 cagccatttgcaggtagatgggggaatgaccaacaacaaaattcttatgcagctacaagc 138072909
Query: 1455 agacattctatatatcccagtagtgaagccctccatgccnntgaacactgccctgggagc 1514
||||||||| ||||||||||||||||||||||| ||||| | || ||| |||||||
Sbjct: 138072910 agacattctgtatatcccagtagtgaagccctcaatgccagaaacaaccgccttgggagc 138072969
Query: 1515 cgccatggcagcangagctgctgaangagttggtgtatggagtct 1559
|||||||||||| | ||||| ||| ||||||| || ||||||||
Sbjct: 138072970 tgccatggcagcaggggctgcagaaggagttggcgtttggagtct 138073014
>Sscrofa_Chr08
|| Length = 148491826
Score = 1037 bits (523), Expect = 0.0
Identities = 1140/1346 (84%)
Strand = Plus / Plus
Query: 131 ctggtttcatggcagccgcgaataaagcagttttgggaccgttggtgggagcagtggacc 190
|||||||||||||||| |||| | ||| | |||| ||||||||||||||||||| ||
Sbjct: 147410509 ctggtttcatggcagctccgaagaccacaggtgtggggccgttggtgggagcagtggtcc 147410568
Query: 191 agggcaccagctcgacgcgctttttggttttcaactcaaaaacagctgaactacttagtc 250
|||| || | ||| || | ||| |||||||||| ||||||||||| ||||| |||||||
Sbjct: 147410569 agggtactaactccactcattttatggttttcaattcaaaaacagcagaactccttagtc 147410628
Query: 251 atcatcaagtagaactaaaacaagagtttccaaaagaaggatgggtggaacaggacccta 310
| ||||| || ||| ||| ||||| ||| ||||||||||||||||||||||| ||||| |
Sbjct: 147410629 accatcaggtggaattaacacaagtgttcccaaaagaaggatgggtggaacaagacccca 147410688
Query: 311 aggaaattctgaattctgtatatgagtgtatagagaaaacctgtgagaaacttggacagc 370
|| ||||| | ||||| ||||| |||||||||| ||| || |||||||||| | | |
Sbjct: 147410689 agctcattcttcagtctgtgtatgaatgtatagagagaacatgcgagaaacttgaagaac 147410748
Query: 371 tcaatattgatatttccaacataaaagctatcggtgtcagtaaccagagggaaaccactg 430
| | |||| | |||||||||||||| | || ||||| || |||||||||||||| |
Sbjct: 147410749 tgcacgttgacctctccaacataaaagccgtgggcgtcagcaatcagagggaaaccacgg 147410808
Query: 431 tggtctgggacaagttaactggagagcctctctacaatgccgtagtgtggcttgacctaa 490
| |||||||||| | | || || ||||| |||||||| ||||| |||||||| ||||| |
Sbjct: 147410809 tcgtctgggacaggctcacgggggagccgctctacaacgccgtggtgtggctcgacctga 147410868
Query: 491 gaacccagtctaccgttgagaatcttagtaaaagaattcccggaaataataactttgtca 550
|||||||||| ||||| ||| || || |||| |||||| || ||||||||||| ||||
Sbjct: 147410869 gaacccagtccaccgtggagctcctcagcaaaaaaattccagggaataataacttcgtca 147410928
Query: 551 agtccaagacaggccttccacttagcacttatttcagtgcagtgaaacttcgttggctcc 610
|||||||||||||||| || || |||||||| |||||||| ||||| ||||| ||||| |
Sbjct: 147410929 agtccaagacaggcctgcccctcagcacttacttcagtgcggtgaagcttcgctggcttc 147410988
Query: 611 ttgacaatgtgagaaaagttcaaaaagcagttgaagaagagagagctctttttgggaccg 670
||||||| ||||| ||||||| || || ||| ||||| |||||||||||||| |||
Sbjct: 147410989 ttgacaacgtgagtcaagttcagaaggcggttcgagaaggcagagctctttttggtacca 147411048
Query: 671 ttgattcatggcttatttggtgcttgacaggaggagccaatggaggtgtccattgtacag 730
| ||||| |||||||| ||| || |||| ||||| || | ||||| |||| || ||||
Sbjct: 147411049 tcgattcctggcttatctggagcatgactggaggggctcacggaggcatccactgcacag 147411108
Query: 731 atgtaacaaatgcaagcaggacgatgcttttcaacattcattctttggaatgggataaag 790
|||||||||||||||||||||||||||| |||||||| || ||| || ||||||| ||||
Sbjct: 147411109 atgtaacaaatgcaagcaggacgatgctcttcaacatccactctctgcaatgggacaaag 147411168
Query: 791 aactctgcgaattttttgaaattccaatgaaaattcttccaaatgttcggagttcttctg 850
| || ||||| || ||||||||||||||| ||||||||| | || |||| ||||| |
Sbjct: 147411169 agctgtgcgatttctttgaaattccaatgggcattcttccagacgtctggagctcttcgg 147411228
Query: 851 agatctatggcctaatgaaagctggggccttggaaggtgtgccaatatccgggtgtttgg 910
|||||||||||||||||||| | |||||||||||||| ||||| ||||| ||||| ||||
Sbjct: 147411229 agatctatggcctaatgaaaaccggggccttggaaggcgtgcccatatcagggtgcttgg 147411288
Query: 911 gtgaccagtctgctgcattggtgggacaaatgtgcttccaggatggacaagccaaaaaca 970
| ||||||||||||||||| || |||||||||||||||||||| ||||||||||||||||
Sbjct: 147411289 gggaccagtctgctgcattagtaggacaaatgtgcttccaggaaggacaagccaaaaaca 147411348
Query: 971 cgtatggaacaggctgtttcttattatgtaacactggccgtaagtgtgtattttctgaac 1030
| ||||||||||||||||||||| ||||||| || |||| |||||||||||||| || |
Sbjct: 147411349 catatggaacaggctgtttcttactatgtaatacaggccacaagtgtgtattttcggagc 147411408
Query: 1031 atggccttctgactacagtggcttacaaacttggcagagacaaaccagtatattatgcat 1090
||||||| ||||| || |||||||||||||| |||| |||| | ||||||| ||||||
Sbjct: 147411409 atggcctgctgaccacggtggcttacaaactaggcaaagaccagccagtatgttatgcgc 147411468
Query: 1091 tagaaggttcggtagctatagctggtgctgttgttcgctggctaagagacaatcttggaa 1150
|||||||||| || |||||||||||||||||| ||||||||||| ||||||| |||||||
Sbjct: 147411469 tagaaggttctgtcgctatagctggtgctgttattcgctggctacgagacaaccttggaa 147411528
Query: 1151 ttataaagacctctgaggaaattgaaaaacttgctaaagaagtaggtacttcttatggct 1210
||||||||||||| || |||| ||||||||||||||||||||||||||||||||| ||||
Sbjct: 147411529 ttataaagacctccgaagaaagtgaaaaacttgctaaagaagtaggtacttcttacggct 147411588
Query: 1211 gctatttcgtcccagcgttttcagggctgtatgcaccatattgggagcctagtgcaagag 1270
|||| ||| ||||||| |||||||| | || ||||| ||||||||||| | |||||||
Sbjct: 147411589 gctacttcatcccagccttttcaggattatacgcaccttattgggagcccacggcaagag 147411648
Query: 1271 ggatcatctgtgggcttactcagttcaccaatagatgccatattgcttttgctgcattgg 1330
|||| |||||||| || |||||||||||||||| | | ||||||||||| |||||||| |
Sbjct: 147411649 ggataatctgtggtctcactcagttcaccaataaaagtcatattgctttcgctgcattag 147411708
Query: 1331 aagctgtttgtttccaaacccgagagattttggatgccatgaaccgtgactgtggaatgc 1390
||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 147411709 aagctatttgtttccaaacccgagagattttggatgccatgaaccgtgactgtggaattc 147411768
Query: 1391 cactcagacacctgcangtagatggagggatgaccaacaacaaaattctcatgcagctcc 1450
|||| | || ||||| ||||||||||| ||||||| ||||||| | || ||||| || |
Sbjct: 147411769 cacttaatcatctgcaagtagatggaggaatgaccaccaacaaagtccttatgcaactgc 147411828
Query: 1451 aagcagacattctatatatcccagta 1476
||||||||||||| |||| ||||||
Sbjct: 147411829 aagcagacattctgcatattccagta 147411854
>Sscrofa_ChrX
|| Length = 144288218
Score = 278 bits (140), Expect = 9e-72
Identities = 140/140 (100%)
Strand = Plus / Plus
Query: 551 agtccaagacaggccttccacttagcacttatttcagtgcagtgaaacttcgttggctcc 610
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 28830360 agtccaagacaggccttccacttagcacttatttcagtgcagtgaaacttcgttggctcc 28830419
Query: 611 ttgacaatgtgagaaaagttcaaaaagcagttgaagaagagagagctctttttgggaccg 670
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 28830420 ttgacaatgtgagaaaagttcaaaaagcagttgaagaagagagagctctttttgggaccg 28830479
Query: 671 ttgattcatggcttatttgg 690
||||||||||||||||||||
Sbjct: 28830480 ttgattcatggcttatttgg 28830499
Score = 254 bits (128), Expect = 1e-64
Identities = 128/128 (100%)
Strand = Plus / Plus
Query: 91 tcaccaaggaaacgggctgcaattcctcgccgaccccaagctggtttcatggcagccgcg 150
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 28789073 tcaccaaggaaacgggctgcaattcctcgccgaccccaagctggtttcatggcagccgcg 28789132
Query: 151 aataaagcagttttgggaccgttggtgggagcagtggaccagggcaccagctcgacgcgc 210
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 28789133 aataaagcagttttgggaccgttggtgggagcagtggaccagggcaccagctcgacgcgc 28789192
Query: 211 tttttggt 218
||||||||
Sbjct: 28789193 tttttggt 28789200
Score = 238 bits (120), Expect = 8e-60
Identities = 122/123 (99%)
Strand = Plus / Plus
Query: 1355 agattttggatgccatgaaccgtgactgtggaatgccactcagacacctgcangtagatg 1414
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 28859964 agattttggatgccatgaaccgtgactgtggaatgccactcagacacctgcaggtagatg 28860023
Query: 1415 gagggatgaccaacaacaaaattctcatgcagctccaagcagacattctatatatcccag 1474
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 28860024 gagggatgaccaacaacaaaattctcatgcagctccaagcagacattctatatatcccag 28860083
Query: 1475 tag 1477
|||
Sbjct: 28860084 tag 28860086
Score = 220 bits (111), Expect = 2e-54
Identities = 111/111 (100%)
Strand = Plus / Plus
Query: 690 gtgcttgacaggaggagccaatggaggtgtccattgtacagatgtaacaaatgcaagcag 749
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 28832900 gtgcttgacaggaggagccaatggaggtgtccattgtacagatgtaacaaatgcaagcag 28832959
Query: 750 gacgatgcttttcaacattcattctttggaatgggataaagaactctgcga 800
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 28832960 gacgatgcttttcaacattcattctttggaatgggataaagaactctgcga 28833010
Score = 216 bits (109), Expect = 3e-53
Identities = 112/113 (99%)
Strand = Plus / Plus
Query: 290 gatgggtggaacaggaccctaaggaaattctgaattctgtatatgagtgtatagagaaaa 349
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 28805966 gatgggtggaacaggaccctaaggaaattctgaattctgtatatgagtgtatagagaaaa 28806025
Query: 350 cctgtgagaaacttggacagctcaatattgatatttccaacataaaagctatc 402
|||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 28806026 cctgtgagaaacttggacagctcaatattgatatttccaacataaaaggtatc 28806078
Score = 196 bits (99), Expect = 3e-47
Identities = 99/99 (100%)
Strand = Plus / Plus
Query: 1174 gaaaaacttgctaaagaagtaggtacttcttatggctgctatttcgtcccagcgttttca 1233
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 28858870 gaaaaacttgctaaagaagtaggtacttcttatggctgctatttcgtcccagcgttttca 28858929
Query: 1234 gggctgtatgcaccatattgggagcctagtgcaagaggg 1272
|||||||||||||||||||||||||||||||||||||||
Sbjct: 28858930 gggctgtatgcaccatattgggagcctagtgcaagaggg 28858968
Score = 170 bits (86), Expect = 2e-39
Identities = 86/86 (100%)
Strand = Plus / Plus
Query: 1271 ggatcatctgtgggcttactcagttcaccaatagatgccatattgcttttgctgcattgg 1330
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 28859473 ggatcatctgtgggcttactcagttcaccaatagatgccatattgcttttgctgcattgg 28859532
Query: 1331 aagctgtttgtttccaaacccgagag 1356
||||||||||||||||||||||||||
Sbjct: 28859533 aagctgtttgtttccaaacccgagag 28859558
Score = 167 bits (84), Expect = 2e-38
Identities = 84/84 (100%)
Strand = Plus / Plus
Query: 1013 agtgtgtattttctgaacatggccttctgactacagtggcttacaaacttggcagagaca 1072
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 28845514 agtgtgtattttctgaacatggccttctgactacagtggcttacaaacttggcagagaca 28845573
Query: 1073 aaccagtatattatgcattagaag 1096
||||||||||||||||||||||||
Sbjct: 28845574 aaccagtatattatgcattagaag 28845597
Score = 163 bits (82), Expect = 4e-37
Identities = 82/82 (100%)
Strand = Plus / Plus
Query: 394 aaagctatcggtgtcagtaaccagagggaaaccactgtggtctgggacaagttaactgga 453
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 28813082 aaagctatcggtgtcagtaaccagagggaaaccactgtggtctgggacaagttaactgga 28813141
Query: 454 gagcctctctacaatgccgtag 475
||||||||||||||||||||||
Sbjct: 28813142 gagcctctctacaatgccgtag 28813163
Score = 159 bits (80), Expect = 6e-36
Identities = 80/80 (100%)
Strand = Plus / Plus
Query: 473 tagtgtggcttgacctaagaacccagtctaccgttgagaatcttagtaaaagaattcccg 532
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 28827465 tagtgtggcttgacctaagaacccagtctaccgttgagaatcttagtaaaagaattcccg 28827524
Query: 533 gaaataataactttgtcaag 552
||||||||||||||||||||
Sbjct: 28827525 gaaataataactttgtcaag 28827544
Score = 159 bits (80), Expect = 6e-36
Identities = 126/139 (90%), Gaps = 3/139 (2%)
Strand = Plus / Plus
Query: 1476 agtgaagccctccatgccnntgaacactgccctgggagccgccatggcagcangagctgc 1535
|||||||||||||||||| | ||||||||||||||||||||||||||| |||||||
Sbjct: 28860194 agtgaagccctccatgcctgaaacaactgccctgggagccgccatggcagcaggagctgc 28860253
Query: 1536 tgaangagttggtgtatggagtcttgacccctaangac-tgtcagctgtcacagtggagc 1594
|||| |||||||||||||||||||||| |||| | ||| |||||||||||||||||||||
Sbjct: 28860254 tgaaggagttggtgtatggagtcttga-ccctgaggacttgtcagctgtcacagtggagc 28860312
Query: 1595 ggtttgaaccctcagatca 1613
|||||||| ||||||||||
Sbjct: 28860313 ggtttgaa-cctcagatca 28860330
Score = 157 bits (79), Expect = 2e-35
Identities = 79/79 (100%)
Strand = Plus / Plus
Query: 1096 ggttcggtagctatagctggtgctgttgttcgctggctaagagacaatcttggaattata 1155
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 28857815 ggttcggtagctatagctggtgctgttgttcgctggctaagagacaatcttggaattata 28857874
Query: 1156 aagacctctgaggaaattg 1174
|||||||||||||||||||
Sbjct: 28857875 aagacctctgaggaaattg 28857893
Score = 149 bits (75), Expect = 6e-33
Identities = 75/75 (100%)
Strand = Plus / Plus
Query: 216 ggttttcaactcaaaaacagctgaactacttagtcatcatcaagtagaactaaaacaaga 275
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 28801681 ggttttcaactcaaaaacagctgaactacttagtcatcatcaagtagaactaaaacaaga 28801740
Query: 276 gtttccaaaagaagg 290
|||||||||||||||
Sbjct: 28801741 gtttccaaaagaagg 28801755
Score = 141 bits (71), Expect = 1e-30
Identities = 71/71 (100%)
Strand = Plus / Plus
Query: 903 gtgtttgggtgaccagtctgctgcattggtgggacaaatgtgcttccaggatggacaagc 962
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 28837712 gtgtttgggtgaccagtctgctgcattggtgggacaaatgtgcttccaggatggacaagc 28837771
Query: 963 caaaaacacgt 973
|||||||||||
Sbjct: 28837772 caaaaacacgt 28837782
Score = 133 bits (67), Expect = 3e-28
Identities = 67/67 (100%)
Strand = Plus / Plus
Query: 801 attttttgaaattccaatgaaaattcttccaaatgttcggagttcttctgagatctatgg 860
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 28834257 attttttgaaattccaatgaaaattcttccaaatgttcggagttcttctgagatctatgg 28834316
Query: 861 cctaatg 867
|||||||
Sbjct: 28834317 cctaatg 28834323
Score = 85.7 bits (43), Expect = 7e-14
Identities = 43/43 (100%)
Strand = Plus / Plus
Query: 972 gtatggaacaggctgtttcttattatgtaacactggccgtaag 1014
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 28844456 gtatggaacaggctgtttcttattatgtaacactggccgtaag 28844498
Score = 73.8 bits (37), Expect = 3e-10
Identities = 37/37 (100%)
Strand = Plus / Plus
Query: 867 gaaagctggggccttggaaggtgtgccaatatccggg 903
|||||||||||||||||||||||||||||||||||||
Sbjct: 28837300 gaaagctggggccttggaaggtgtgccaatatccggg 28837336
Score = 67.9 bits (34), Expect = 2e-08
Identities = 34/34 (100%)
Strand = Plus / Plus
Query: 3 ggggctgcctggagcgcgaacagagcgatctact 36
||||||||||||||||||||||||||||||||||
Sbjct: 28788985 ggggctgcctggagcgcgaacagagcgatctact 28789018
Score = 60.0 bits (30), Expect = 4e-06
Identities = 54/64 (84%)
Strand = Plus / Plus
Query: 1620 agaaagtgaaatccgnntatctacgtgnaagaaagccctgatgagntcaatgggntgggn 1679
||||||||||||||| |||||||| ||||||||| |||||| |||||||| ||||
Sbjct: 28863731 agaaagtgaaatccgttattctacgtggaagaaagccgtgatgaagtcaatgggttgggt 28863790
Query: 1680 taca 1683
||||
Sbjct: 28863791 taca 28863794
Database: Sscrofa_10.2.fasta
Posted date: Nov 16, 2011 10:34 AM
Number of letters in database: 2,808,509,378
Number of sequences in database: 4582
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4582
Number of Hits to DB: 48,225,415
Number of extensions: 308
Number of successful extensions: 308
Number of sequences better than 1.0e-05: 3
Number of HSP's gapped: 305
Number of HSP's successfully gapped: 22
Length of query: 1683
Length of database: 2,808,509,378
Length adjustment: 22
Effective length of query: 1661
Effective length of database: 2,808,408,574
Effective search space: 4664766641414
Effective search space used: 4664766641414
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 18 (36.2 bits)
S2: 30 (60.0 bits)