Search to RefSeqBP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-013283
(1270 letters)
Database: RefSeq49_BP.fasta
33,088 sequences; 17,681,374 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001070399.1| prostasin [Bos taurus]. 499 e-141
Alignment gi|XP_002697972.1| PREDICTED: marapsin-like [Bos taurus]. 261 9e-70
Alignment gi|XP_599729.4| PREDICTED: marapsin-like [Bos taurus]. 261 9e-70
Alignment gi|XP_002697912.1| PREDICTED: protease, serine, 33-like [Bos ta... 258 8e-69
Alignment gi|XP_607216.5| PREDICTED: protease, serine, 33-like [Bos tauru... 258 8e-69
Alignment gi|XP_002697973.1| PREDICTED: protease, serine, 22-like [Bos ta... 219 5e-57
Alignment gi|XP_587533.3| PREDICTED: protease, serine, 22-like [Bos tauru... 219 5e-57
Alignment gi|XP_002688999.1| PREDICTED: transmembrane protease, serine 9 ... 215 8e-56
Alignment gi|XP_002697910.1| PREDICTED: protease, serine, 21-like [Bos ta... 206 3e-53
Alignment gi|XP_606902.5| PREDICTED: protease, serine, 21-like [Bos tauru... 206 3e-53
>ref|NP_001070399.1| prostasin [Bos taurus].
Length = 343
Score = 499 bits (1284), Expect = e-141
Identities = 242/320 (75%), Positives = 265/320 (82%), Gaps = 1/320 (0%)
Frame = +1
Query: 247 MAQREGLGPRGLAAVATLISLGLFQNGMGAK-GDAVSCGIVPQAQGRITGGSNSDPGQWP 423
MA++ G+GPR L AVAT++ LGLF+NG+GA +A SCG+VPQ GRITGG+ + GQWP
Sbjct: 1 MARKSGVGPRWLEAVATVLLLGLFRNGIGAVVAEADSCGMVPQ--GRITGGTTAALGQWP 58
Query: 424 WQVSINYNGEHVCGGSLVSDQWVLSAAHCFPRDHSTSAYEVKLGAHQLDSFSSSMTVRTV 603
WQVSIN++G HVCGGSLVSDQWVLSAAHCFP D+ YEVKLGAHQLD FS+ VR V
Sbjct: 59 WQVSINHHGTHVCGGSLVSDQWVLSAAHCFPSDNKIEEYEVKLGAHQLDYFSTDTQVRGV 118
Query: 604 AQVISHPSYLQEGSQGDIALLQLSSPVTFSRYIWPICLPAANASFPNGLQCTVTGWGHVA 783
AQVISH Y EGS GDIALLQLSS VTFSRYI PICLPAANASFPNGLQC VTGWGHVA
Sbjct: 119 AQVISHEKYSHEGSMGDIALLQLSSSVTFSRYIRPICLPAANASFPNGLQCVVTGWGHVA 178
Query: 784 PSVSLQRPRTLQQLEVPLISRETCNCLYNIDANPDEPHFIQQDMLCAGYVKGGKDACQGD 963
PSVSLQ PR LQQLEVPLISRETCNCLYNI+A P EPH I QDMLCAGYV G KDACQGD
Sbjct: 179 PSVSLQHPRPLQQLEVPLISRETCNCLYNINAKPGEPHVIDQDMLCAGYVNGSKDACQGD 238
Query: 964 SGGPLSCPAGGHWYLAGIVSWGDACGAPNRPGVYTLTSTYASWIQHNVAELQPQVGTHIG 1143
SGGPLSCP G WYLAGIVSWGDACGAPNRPGVYTLTS YASWI + VAELQP+V +
Sbjct: 239 SGGPLSCPVAGRWYLAGIVSWGDACGAPNRPGVYTLTSVYASWIHYKVAELQPKVVPQME 298
Query: 1144 ESEPDSDLCSNYGALHAAPA 1203
ES+PD LCS+Y ++APA
Sbjct: 299 ESQPDGHLCSHYKGFNSAPA 318
>ref|XP_002697972.1| PREDICTED: marapsin-like [Bos taurus].
Length = 313
Score = 261 bits (667), Expect = 9e-70
Identities = 125/259 (48%), Positives = 166/259 (64%), Gaps = 1/259 (0%)
Frame = +1
Query: 352 SCGIVPQAQGRITGGSNSDPGQWPWQVSINYNGEHVCGGSLVSDQWVLSAAHCFPRDHST 531
+CG P+ R+ GG N+ G+WPWQVSI NG H CGGSL++D+WVL+AAHCF T
Sbjct: 28 ACGR-PRMLNRMVGGQNALEGEWPWQVSIQRNGSHFCGGSLITDRWVLTAAHCFSNTSET 86
Query: 532 SAYEVKLGAHQLDSFSSSMTVRTVAQVISHPSYLQEGSQGDIALLQLSSPVTFSRYIWPI 711
S Y+V LG QL V +V S+P Y S D+AL++L +PVTF+ YI P+
Sbjct: 87 SLYQVLLGVLQLARPGPHAVYARVKRVESNPKYQGMASSADVALVELEAPVTFTNYILPV 146
Query: 712 CLPAANASFPNGLQCTVTGWGHVAPSVSLQRPRTLQQLEVPLISRETCNCLYNIDANPD- 888
C+P + F +G++C VTGWG + SL +PRTLQ+L VP+IS CN LY+ DA
Sbjct: 147 CVPDPSVVFESGMKCWVTGWGTPSEQDSLPKPRTLQKLAVPIISTPKCNLLYSKDAESGF 206
Query: 889 EPHFIQQDMLCAGYVKGGKDACQGDSGGPLSCPAGGHWYLAGIVSWGDACGAPNRPGVYT 1068
+P I+ DMLCAG+ +G +DAC+GDSGGPL C G W AG++SWG+ C NRPGVY
Sbjct: 207 QPRTIKDDMLCAGFAEGKRDACKGDSGGPLVCLVGQVWLQAGVISWGEGCARRNRPGVYI 266
Query: 1069 LTSTYASWIQHNVAELQPQ 1125
+++ WI + ELQ Q
Sbjct: 267 RLTSHHDWIHRIIPELQFQ 285
>ref|XP_599729.4| PREDICTED: marapsin-like [Bos taurus].
Length = 313
Score = 261 bits (667), Expect = 9e-70
Identities = 125/259 (48%), Positives = 166/259 (64%), Gaps = 1/259 (0%)
Frame = +1
Query: 352 SCGIVPQAQGRITGGSNSDPGQWPWQVSINYNGEHVCGGSLVSDQWVLSAAHCFPRDHST 531
+CG P+ R+ GG N+ G+WPWQVSI NG H CGGSL++D+WVL+AAHCF T
Sbjct: 28 ACGR-PRMLNRMVGGQNALEGEWPWQVSIQRNGSHFCGGSLITDRWVLTAAHCFSNTSET 86
Query: 532 SAYEVKLGAHQLDSFSSSMTVRTVAQVISHPSYLQEGSQGDIALLQLSSPVTFSRYIWPI 711
S Y+V LG QL V +V S+P Y S D+AL++L +PVTF+ YI P+
Sbjct: 87 SLYQVLLGVLQLARPGPHAVYARVKRVESNPKYQGMASSADVALVELEAPVTFTNYILPV 146
Query: 712 CLPAANASFPNGLQCTVTGWGHVAPSVSLQRPRTLQQLEVPLISRETCNCLYNIDANPD- 888
C+P + F +G++C VTGWG + SL +PRTLQ+L VP+IS CN LY+ DA
Sbjct: 147 CVPDPSVVFESGMKCWVTGWGTPSEQDSLPKPRTLQKLAVPIISTPKCNLLYSKDAESGF 206
Query: 889 EPHFIQQDMLCAGYVKGGKDACQGDSGGPLSCPAGGHWYLAGIVSWGDACGAPNRPGVYT 1068
+P I+ DMLCAG+ +G +DAC+GDSGGPL C G W AG++SWG+ C NRPGVY
Sbjct: 207 QPRTIKDDMLCAGFAEGKRDACKGDSGGPLVCLVGQVWLQAGVISWGEGCARRNRPGVYI 266
Query: 1069 LTSTYASWIQHNVAELQPQ 1125
+++ WI + ELQ Q
Sbjct: 267 RLTSHHDWIHRIIPELQFQ 285
>ref|XP_002697912.1| PREDICTED: protease, serine, 33-like [Bos taurus].
Length = 273
Score = 258 bits (659), Expect = 8e-69
Identities = 123/251 (49%), Positives = 155/251 (61%), Gaps = 1/251 (0%)
Frame = +1
Query: 349 VSCGIVPQAQGRITGGSNSDPGQWPWQVSINYNGEHVCGGSLVSDQWVLSAAHCFPRDHS 528
++CG P+ RI GG ++ G+WPWQ SI + G HVCGGSL++ QWVL+AAHCFPR
Sbjct: 15 LACG-QPRVSSRIVGGRDARAGEWPWQASIQHRGAHVCGGSLIAPQWVLTAAHCFPRKAL 73
Query: 529 TSAYEVKLGAHQLDSFSSSMTVRTVAQVISHPSYLQEGSQGDIALLQLSSPVTFSRYIWP 708
+ Y V+LGA L S + V +V+ P Y ++G+ GD+ALL L P S + P
Sbjct: 74 PADYRVRLGAPHLGPSSPPALLAPVRRVLLPPDYSEDGAHGDLALLLLRRPTPLSTRVQP 133
Query: 709 ICLPAANASFPNGLQCTVTGWGHVAPSVSLQRPRTLQQLEVPLISRETCNCLYNIDAN-P 885
+CLP A P G C VTGWG + P V L R LQ + VPL+ TC+ LY++ + P
Sbjct: 134 VCLPEPGARPPPGTPCWVTGWGSLRPGVPLPEWRPLQGVRVPLLDAHTCDHLYHLGTDVP 193
Query: 886 DEPHFIQQDMLCAGYVKGGKDACQGDSGGPLSCPAGGHWYLAGIVSWGDACGAPNRPGVY 1065
H + LCAGYV G KDACQGDSGGPL C G W L G+VSWG C PNRPGVY
Sbjct: 194 RAEHIVLPGSLCAGYVGGQKDACQGDSGGPLVCMKSGRWILVGVVSWGKGCALPNRPGVY 253
Query: 1066 TLTSTYASWIQ 1098
T +TY+ WIQ
Sbjct: 254 TNVATYSPWIQ 264
>ref|XP_607216.5| PREDICTED: protease, serine, 33-like [Bos taurus].
Length = 273
Score = 258 bits (659), Expect = 8e-69
Identities = 123/251 (49%), Positives = 155/251 (61%), Gaps = 1/251 (0%)
Frame = +1
Query: 349 VSCGIVPQAQGRITGGSNSDPGQWPWQVSINYNGEHVCGGSLVSDQWVLSAAHCFPRDHS 528
++CG P+ RI GG ++ G+WPWQ SI + G HVCGGSL++ QWVL+AAHCFPR
Sbjct: 15 LACG-QPRVSSRIVGGRDARAGEWPWQASIQHRGAHVCGGSLIAPQWVLTAAHCFPRKAL 73
Query: 529 TSAYEVKLGAHQLDSFSSSMTVRTVAQVISHPSYLQEGSQGDIALLQLSSPVTFSRYIWP 708
+ Y V+LGA L S + V +V+ P Y ++G+ GD+ALL L P S + P
Sbjct: 74 PADYRVRLGAPHLGPSSPPALLAPVRRVLLPPDYSEDGAHGDLALLLLRRPTPLSTRVQP 133
Query: 709 ICLPAANASFPNGLQCTVTGWGHVAPSVSLQRPRTLQQLEVPLISRETCNCLYNIDAN-P 885
+CLP A P G C VTGWG + P V L R LQ + VPL+ TC+ LY++ + P
Sbjct: 134 VCLPEPGARPPPGTPCWVTGWGSLRPGVPLPEWRPLQGVRVPLLDAHTCDHLYHLGTDVP 193
Query: 886 DEPHFIQQDMLCAGYVKGGKDACQGDSGGPLSCPAGGHWYLAGIVSWGDACGAPNRPGVY 1065
H + LCAGYV G KDACQGDSGGPL C G W L G+VSWG C PNRPGVY
Sbjct: 194 RAEHIVLPGSLCAGYVGGQKDACQGDSGGPLVCMKSGRWILVGVVSWGKGCALPNRPGVY 253
Query: 1066 TLTSTYASWIQ 1098
T +TY+ WIQ
Sbjct: 254 TNVATYSPWIQ 264
>ref|XP_002697973.1| PREDICTED: protease, serine, 22-like [Bos taurus].
Length = 296
Score = 219 bits (557), Expect = 5e-57
Identities = 111/248 (44%), Positives = 146/248 (58%), Gaps = 2/248 (0%)
Frame = +1
Query: 382 RITGGSNSDPGQWPWQVSINYNGEHVCGGSLVSDQWVLSAAHCFPRD-HSTSAYEVKLGA 558
RI GG +S +WPW VSI NG H C GSL++ +WVL+AAHCF + + + V LGA
Sbjct: 20 RIVGGEDSSDAEWPWVVSIRKNGTHHCAGSLLTSRWVLTAAHCFKDNLDKPTQFSVLLGA 79
Query: 559 HQLDSFSSSMTVRTVAQVISHPSYL-QEGSQGDIALLQLSSPVTFSRYIWPICLPAANAS 735
QL + +A HP Y +EGS+ DIAL++L + FS + PICLP +
Sbjct: 80 WQLGNPGPRSQEVGIAWAQPHPVYSWKEGSRADIALVRLERAIQFSERVLPICLPDSTVQ 139
Query: 736 FPNGLQCTVTGWGHVAPSVSLQRPRTLQQLEVPLISRETCNCLYNIDANPDEPHFIQQDM 915
C + GWG V V L P+TLQ+L+VP+I TC+ LY A I +DM
Sbjct: 140 LSPDTNCWIAGWGSVHDGVPLSHPQTLQKLKVPIIDSATCSRLYWRGAGQGA---ITEDM 196
Query: 916 LCAGYVKGGKDACQGDSGGPLSCPAGGHWYLAGIVSWGDACGAPNRPGVYTLTSTYASWI 1095
LCAGY++G +DAC GDSGGPL C G W LAG++SWG+ C NRPGVY + + SW+
Sbjct: 197 LCAGYLEGERDACLGDSGGPLMCQVEGTWLLAGVISWGEGCAQRNRPGVYISLAAHRSWV 256
Query: 1096 QHNVAELQ 1119
Q V +Q
Sbjct: 257 QRIVQGVQ 264
>ref|XP_587533.3| PREDICTED: protease, serine, 22-like [Bos taurus].
Length = 296
Score = 219 bits (557), Expect = 5e-57
Identities = 111/248 (44%), Positives = 146/248 (58%), Gaps = 2/248 (0%)
Frame = +1
Query: 382 RITGGSNSDPGQWPWQVSINYNGEHVCGGSLVSDQWVLSAAHCFPRD-HSTSAYEVKLGA 558
RI GG +S +WPW VSI NG H C GSL++ +WVL+AAHCF + + + V LGA
Sbjct: 20 RIVGGEDSSDAEWPWVVSIRKNGTHHCAGSLLTSRWVLTAAHCFKDNLDKPTQFSVLLGA 79
Query: 559 HQLDSFSSSMTVRTVAQVISHPSYL-QEGSQGDIALLQLSSPVTFSRYIWPICLPAANAS 735
QL + +A HP Y +EGS+ DIAL++L + FS + PICLP +
Sbjct: 80 WQLGNPGPRSQEVGIAWAQPHPVYSWKEGSRADIALVRLERAIQFSERVLPICLPDSTVQ 139
Query: 736 FPNGLQCTVTGWGHVAPSVSLQRPRTLQQLEVPLISRETCNCLYNIDANPDEPHFIQQDM 915
C + GWG V V L P+TLQ+L+VP+I TC+ LY A I +DM
Sbjct: 140 LSPDTNCWIAGWGSVHDGVPLSHPQTLQKLKVPIIDSATCSRLYWRGAGQGA---ITEDM 196
Query: 916 LCAGYVKGGKDACQGDSGGPLSCPAGGHWYLAGIVSWGDACGAPNRPGVYTLTSTYASWI 1095
LCAGY++G +DAC GDSGGPL C G W LAG++SWG+ C NRPGVY + + SW+
Sbjct: 197 LCAGYLEGERDACLGDSGGPLMCQVEGTWLLAGVISWGEGCAQRNRPGVYISLAAHRSWV 256
Query: 1096 QHNVAELQ 1119
Q V +Q
Sbjct: 257 QRIVQGVQ 264
>ref|XP_002688999.1| PREDICTED: transmembrane protease, serine 9 [Bos taurus].
Length = 1061
Score = 215 bits (547), Expect = 8e-56
Identities = 103/255 (40%), Positives = 152/255 (59%), Gaps = 3/255 (1%)
Frame = +1
Query: 355 CGIVP--QAQGRITGGSNSDPGQWPWQVSINYNGEHVCGGSLVSDQWVLSAAHCFPRDHS 528
CG+ P + GRI GG + PG++PWQVS+ N EH CG +++S +W++SAAHCF
Sbjct: 191 CGLQPGWKTAGRIVGGVEASPGEFPWQVSLRENNEHFCGAAIISARWLVSAAHCFNEFQD 250
Query: 529 TSAYEVKLGAHQLDSFSSSMTVRTVAQVISHPSYLQEGSQGDIALLQLSSPVTFSRYIWP 708
+ + +G L +SM VA++I+HPSY + + D+A+L+L P+ FSR++ P
Sbjct: 251 SPEWVAYVGTTYLSGSEASMVRARVARIITHPSYNSDTADFDVAVLELGRPLPFSRHVQP 310
Query: 709 ICLPAANASFPNGLQCTVTGWGHVAPSVSLQRPRTLQQLEVPLISRETCNCLYNIDANPD 888
+CLPAA+ FP +C ++GWG++ + L +P LQ+ V L+ + C LY
Sbjct: 311 VCLPAASHIFPPRKKCLISGWGYLKENF-LVKPEMLQKATVELLDQALCTSLYG------ 363
Query: 889 EPHFIQQDMLCAGYVKGGKDACQGDSGGPLSC-PAGGHWYLAGIVSWGDACGAPNRPGVY 1065
H + M+CAGY+ G D+CQGDSGGPL C + G ++LAGIVSWG C PGVY
Sbjct: 364 --HSLTDRMVCAGYLDGKVDSCQGDSGGPLVCEESSGRFFLAGIVSWGIGCAEAQHPGVY 421
Query: 1066 TLTSTYASWIQHNVA 1110
++ WI +A
Sbjct: 422 ARVTSLRDWILETIA 436
Score = 192 bits (487), Expect = 7e-49
Identities = 107/256 (41%), Positives = 137/256 (53%), Gaps = 3/256 (1%)
Frame = +1
Query: 355 CGIVPQAQ-GRITGGSNSDPGQWPWQVSINYNG-EHVCGGSLVSDQWVLSAAHCFPRDHS 528
CG+ P A RI GGS + G+WPWQVS+ EH CG LV+++W+LSAAHCF
Sbjct: 818 CGLAPAAALTRIVGGSAAGRGEWPWQVSLWLRRREHRCGAVLVAERWLLSAAHCFDVYGD 877
Query: 529 TSAYEVKLGAHQLDSFSSSMTVRTVAQVISHPSYLQEGSQGDIALLQLSSPVTFSRYIWP 708
+ LG L + VA++ HP Y D+ALL+L PV SR + P
Sbjct: 878 PKQWAAFLGTPFLSGADGQL--ERVARIHKHPFYNLYTLDYDVALLELVGPVRRSRLVRP 935
Query: 709 ICLPAANASFPNGLQCTVTGWGHVAPSVSLQRPRTLQQLEVPLISRETCNCLYNIDANPD 888
ICLP P+G +C +TGWG V S+ R LQ+ V L+S +TC Y
Sbjct: 936 ICLPEPAPRPPDGARCVITGWGSVREGGSM--ARQLQKAAVRLLSEQTCRRFY------- 986
Query: 889 EPHFIQQDMLCAGYVKGGKDACQGDSGGPLSC-PAGGHWYLAGIVSWGDACGAPNRPGVY 1065
P I MLCAG+ +GG D+C GD+GGPL+C G W L G+ SWG CG P PGVY
Sbjct: 987 -PVQISSRMLCAGFPQGGVDSCSGDAGGPLACREPSGRWVLTGVTSWGYGCGRPQFPGVY 1045
Query: 1066 TLTSTYASWIQHNVAE 1113
T + WI N+ E
Sbjct: 1046 TRVAAVRGWIGQNIQE 1061
Score = 190 bits (483), Expect = 2e-48
Identities = 97/250 (38%), Positives = 137/250 (54%), Gaps = 3/250 (1%)
Frame = +1
Query: 355 CGIVPQAQG--RITGGSNSDPGQWPWQVSINYNGEHVCGGSLVSDQWVLSAAHCFPRDHS 528
CG P + RI GG + G+ PWQVS+ H CG ++V D+W+LSAAHCF
Sbjct: 492 CGARPALEKPTRIVGGLGASLGEVPWQVSLKEGSRHFCGATVVGDRWLLSAAHCFNHT-K 550
Query: 529 TSAYEVKLGAHQLDSFSSSMTVRTVAQVISHPSYLQEGSQGDIALLQLSSPVTFSRYIWP 708
+LG L S + +V+ HP Y D+A+L+L+ P+ F++Y+ P
Sbjct: 551 VELVRAQLGTASLSGVGGSPVKVGLRRVVLHPQYNPSILDFDVAVLELARPLVFNKYVQP 610
Query: 709 ICLPAANASFPNGLQCTVTGWGHVAPSVSLQRPRTLQQLEVPLISRETCNCLYNIDANPD 888
+CLP A FP G +C ++GWG+ + +P LQQ V +I + C+ LYN
Sbjct: 611 VCLPLAIQKFPVGRKCVISGWGNTQEG-NATKPDLLQQASVGIIDHKACSALYNFS---- 665
Query: 889 EPHFIQQDMLCAGYVKGGKDACQGDSGGPLSC-PAGGHWYLAGIVSWGDACGAPNRPGVY 1065
+ M+CAG+++G D+CQGDSGGPL+C G +YLAGIVSWG C +PGVY
Sbjct: 666 ----LTDRMICAGFLEGKVDSCQGDSGGPLACEETPGVFYLAGIVSWGIGCAQVKKPGVY 721
Query: 1066 TLTSTYASWI 1095
T + WI
Sbjct: 722 TRITRLKGWI 731
>ref|XP_002697910.1| PREDICTED: protease, serine, 21-like [Bos taurus].
Length = 485
Score = 206 bits (525), Expect = 3e-53
Identities = 110/255 (43%), Positives = 151/255 (59%), Gaps = 11/255 (4%)
Frame = +1
Query: 382 RITGGSNSDPGQWPWQVSINYNGEHVCGGSLVSDQWVLSAAHCFPR-----DHSTSAYEV 546
RI GG ++ G WPWQ S+ G H CG SL++ +W LSAAHCF + D + + +
Sbjct: 208 RIVGGKDATIGHWPWQGSLRLWGYHFCGASLLNRRWALSAAHCFEKALSSLDSNRNPFHW 267
Query: 547 KLGAHQLDSFSSSMTVRT------VAQVISHPSYLQEGSQGDIALLQLSSPVTFSRYIWP 708
+ +L + S ++ V Q+ P YL DIALL+LSS VT+++YI P
Sbjct: 268 SVQFGELSAAPSIWNLQAYYNRYNVDQIFLSPHYLGAPVY-DIALLKLSSSVTYTKYIQP 326
Query: 709 ICLPAANASFPNGLQCTVTGWGHVAPSVSLQRPRTLQQLEVPLISRETCNCLYNIDANPD 888
IC+ A+ + F N C VTGWG + +SL P TLQ+++V +I+ CN L+++ PD
Sbjct: 327 ICVMASISEFENRSDCWVTGWGDIEEELSLPSPYTLQEVQVGIINTTMCNHLFSM---PD 383
Query: 889 EPHFIQQDMLCAGYVKGGKDACQGDSGGPLSCPAGGHWYLAGIVSWGDACGAPNRPGVYT 1068
I DM+CAG +GGKD+C GDSGGPL C G WY G+VSWG CG PNRPGVYT
Sbjct: 384 FRIDIWGDMICAGEPQGGKDSCFGDSGGPLVCEKKGLWYQVGVVSWGVGCGRPNRPGVYT 443
Query: 1069 LTSTYASWIQHNVAE 1113
S + WI+ +A+
Sbjct: 444 NISVHYKWIREVLAQ 458
>ref|XP_606902.5| PREDICTED: protease, serine, 21-like [Bos taurus].
Length = 495
Score = 206 bits (525), Expect = 3e-53
Identities = 110/255 (43%), Positives = 151/255 (59%), Gaps = 11/255 (4%)
Frame = +1
Query: 382 RITGGSNSDPGQWPWQVSINYNGEHVCGGSLVSDQWVLSAAHCFPR-----DHSTSAYEV 546
RI GG ++ G WPWQ S+ G H CG SL++ +W LSAAHCF + D + + +
Sbjct: 218 RIVGGKDATIGHWPWQGSLRLWGYHFCGASLLNRRWALSAAHCFEKALSSLDSNRNPFHW 277
Query: 547 KLGAHQLDSFSSSMTVRT------VAQVISHPSYLQEGSQGDIALLQLSSPVTFSRYIWP 708
+ +L + S ++ V Q+ P YL DIALL+LSS VT+++YI P
Sbjct: 278 SVQFGELSAAPSIWNLQAYYNRYNVDQIFLSPHYLGAPVY-DIALLKLSSSVTYTKYIQP 336
Query: 709 ICLPAANASFPNGLQCTVTGWGHVAPSVSLQRPRTLQQLEVPLISRETCNCLYNIDANPD 888
IC+ A+ + F N C VTGWG + +SL P TLQ+++V +I+ CN L+++ PD
Sbjct: 337 ICVMASISEFENRSDCWVTGWGDIEEELSLPSPYTLQEVQVGIINTTMCNHLFSM---PD 393
Query: 889 EPHFIQQDMLCAGYVKGGKDACQGDSGGPLSCPAGGHWYLAGIVSWGDACGAPNRPGVYT 1068
I DM+CAG +GGKD+C GDSGGPL C G WY G+VSWG CG PNRPGVYT
Sbjct: 394 FRIDIWGDMICAGEPQGGKDSCFGDSGGPLVCEKKGLWYQVGVVSWGVGCGRPNRPGVYT 453
Query: 1069 LTSTYASWIQHNVAE 1113
S + WI+ +A+
Sbjct: 454 NISVHYKWIREVLAQ 468
Database: RefSeq49_BP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 17,681,374
Number of sequences in database: 33,088
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33088
Number of Hits to DB: 51,416,968
Number of extensions: 1530375
Number of successful extensions: 7940
Number of sequences better than 1.0e-05: 189
Number of HSP's gapped: 7335
Number of HSP's successfully gapped: 200
Length of query: 423
Length of database: 17,681,374
Length adjustment: 105
Effective length of query: 318
Effective length of database: 14,207,134
Effective search space: 4517868612
Effective search space used: 4517868612
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Animal-Genome cDNA 20110601C-013283
Search to RefSeqCP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-013283
(1270 letters)
Database: RefSeq49_CP.fasta
33,336 sequences; 18,874,504 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_848861.1| PREDICTED: similar to Prostasin precursor [Cani... 498 e-141
Alignment gi|XP_547177.2| PREDICTED: similar to marapsin [Canis familiari... 252 6e-67
Alignment gi|XP_547173.2| PREDICTED: similar to protease, serine, 33 [Can... 252 6e-67
Alignment gi|XP_547174.2| PREDICTED: similar to tryptase 5 [Canis familia... 246 4e-65
Alignment gi|XP_547176.2| PREDICTED: similar to protease, serine, 22 [Can... 229 6e-60
Alignment gi|XP_547044.2| PREDICTED: similar to protease, serine, 36 [Can... 227 2e-59
Alignment gi|XP_853980.1| PREDICTED: similar to transmembrane protease, s... 214 1e-55
Alignment gi|XP_536999.2| PREDICTED: similar to tryptase 4 [Canis familia... 209 6e-54
Alignment gi|XP_855225.1| PREDICTED: similar to epidermis-specific serine... 205 7e-53
Alignment gi|XP_539294.2| PREDICTED: similar to airway trypsin-like 5 [Ca... 205 7e-53
>ref|XP_848861.1| PREDICTED: similar to Prostasin precursor [Canis familiaris].
Length = 331
Score = 498 bits (1282), Expect = e-141
Identities = 243/319 (76%), Positives = 264/319 (82%)
Frame = +1
Query: 247 MAQREGLGPRGLAAVATLISLGLFQNGMGAKGDAVSCGIVPQAQGRITGGSNSDPGQWPW 426
MA R GLGP L AVA L+ LGLF++G+ CG+ QA RITGGS + GQWPW
Sbjct: 1 MAHRAGLGPGWLEAVAILLLLGLFRSGLAF------CGVASQA--RITGGSGAAAGQWPW 52
Query: 427 QVSINYNGEHVCGGSLVSDQWVLSAAHCFPRDHSTSAYEVKLGAHQLDSFSSSMTVRTVA 606
QVSI Y+G HVCGGSLVS+QWVLSAAHCFPR+H YEVKLGAHQLDS++ VRTVA
Sbjct: 53 QVSITYDGVHVCGGSLVSEQWVLSAAHCFPREHLKEDYEVKLGAHQLDSYTPEAEVRTVA 112
Query: 607 QVISHPSYLQEGSQGDIALLQLSSPVTFSRYIWPICLPAANASFPNGLQCTVTGWGHVAP 786
QVISH SY QEGSQGDIALLQLSSPVTFSRYI PICLPAANASFPNGLQCTVTGWGHVAP
Sbjct: 113 QVISHTSYQQEGSQGDIALLQLSSPVTFSRYIRPICLPAANASFPNGLQCTVTGWGHVAP 172
Query: 787 SVSLQRPRTLQQLEVPLISRETCNCLYNIDANPDEPHFIQQDMLCAGYVKGGKDACQGDS 966
SVSL PR LQQLEVPLISRETCNCLYNI+A P+EPHFIQQDM+CAGYV+GGKDACQGDS
Sbjct: 173 SVSLLAPRQLQQLEVPLISRETCNCLYNINAKPEEPHFIQQDMVCAGYVRGGKDACQGDS 232
Query: 967 GGPLSCPAGGHWYLAGIVSWGDACGAPNRPGVYTLTSTYASWIQHNVAELQPQVGTHIGE 1146
GGPLSCP G WYLAGIVSWGDACGAPNRPGVYTLTS+YASWI H V ELQP+V I E
Sbjct: 233 GGPLSCPVAGLWYLAGIVSWGDACGAPNRPGVYTLTSSYASWIHHQVTELQPRVVPQIQE 292
Query: 1147 SEPDSDLCSNYGALHAAPA 1203
S+PD +LC + A +APA
Sbjct: 293 SQPDGNLCVYHQAFSSAPA 311
>ref|XP_547177.2| PREDICTED: similar to marapsin [Canis familiaris].
Length = 531
Score = 252 bits (643), Expect = 6e-67
Identities = 124/276 (44%), Positives = 165/276 (59%), Gaps = 13/276 (4%)
Frame = +1
Query: 367 PQAQGRITGGSNSDPGQWPWQVSINYNGEHVCGGSLVSDQWVLSAAHCFPRDHSTSAYEV 546
P+ R+ GG ++ G+WPWQVSI NG H CGGSL++++WVL+AAHCF TS Y+V
Sbjct: 238 PRMLNRMVGGWDALEGEWPWQVSIQRNGSHFCGGSLLTERWVLTAAHCFSNTSETSLYQV 297
Query: 547 KLGAHQLDSFSSSMTVRTVAQVISHPSYLQEGSQGDIALLQLSSPVTFSRYIWPICLPAA 726
LGA QL V +V S+P Y S D+AL++L +PVTF+ YI P+C+P
Sbjct: 298 LLGARQLVRPGPHAVYARVKRVESNPLYRGMASSADVALVELEAPVTFTNYILPVCVPDP 357
Query: 727 NASFPNGLQCTVTGWGHVAPSVSLQRPRTLQQLEVPLISRETCNCLYNIDANPD-EPHFI 903
+ +F G+ C VTGWG + L PR LQ+L VP+I CN LY+ DA +P I
Sbjct: 358 SGAFEAGMSCWVTGWGSPSEEDRLPSPRVLQKLAVPIIDTPKCNLLYSKDAEAGLQPKAI 417
Query: 904 QQDMLCAGYVKGGKDACQGDSGGPLSCPAGGHWYLAGIVSWGDACGAPNRPGVYTLTSTY 1083
+ DMLCAG+ +G KDAC+GDSGGPL C G W AG++SWG+ C NRPGVY +++
Sbjct: 418 KDDMLCAGFAEGKKDACKGDSGGPLVCLVGRLWLQAGVISWGEGCARRNRPGVYIRVTSH 477
Query: 1084 ASWIQHNVAELQ------------PQVGTHIGESEP 1155
WI + LQ PQV H+ +S P
Sbjct: 478 HDWIHRIIPNLQFQQAELGGQKRGPQVQQHLLDSVP 513
>ref|XP_547173.2| PREDICTED: similar to protease, serine, 33 [Canis familiaris].
Length = 277
Score = 252 bits (643), Expect = 6e-67
Identities = 125/266 (46%), Positives = 164/266 (61%), Gaps = 5/266 (1%)
Frame = +1
Query: 328 MGAKG----DAVSCGIVPQAQGRITGGSNSDPGQWPWQVSINYNGEHVCGGSLVSDQWVL 495
+GA G ++ +CG PQ RI GG ++ GQWPWQ SI + G HVCGGSL++ QWVL
Sbjct: 14 LGAAGTGTLESAACG-QPQVSSRIVGGRDARDGQWPWQASIQHRGAHVCGGSLIAPQWVL 72
Query: 496 SAAHCFPRDHSTSAYEVKLGAHQLDSFSSSMTVRTVAQVISHPSYLQEGSQGDIALLQLS 675
+AAHCF R S Y V+LGA L S V +V+ P + +E ++GD+ALLQL
Sbjct: 73 TAAHCFLRPTRPSEYRVRLGALHLGPASPRALWAQVRRVLLPPDHSEERARGDLALLQLR 132
Query: 676 SPVTFSRYIWPICLPAANASFPNGLQCTVTGWGHVAPSVSLQRPRTLQQLEVPLISRETC 855
PV S + P+CLP A P G C VTGWG + P L R LQ + VPL+ TC
Sbjct: 133 RPVPLSARVQPVCLP--EACPPPGTPCWVTGWGSLHPGEPLPDWRPLQGVRVPLLDSRTC 190
Query: 856 NCLYNIDAN-PDEPHFIQQDMLCAGYVKGGKDACQGDSGGPLSCPAGGHWYLAGIVSWGD 1032
+ LY++ N P H + +CAGY++G +DACQGDSGGPL+C G W L G+VSWG
Sbjct: 191 DRLYHVGTNLPRGEHIVLPGSVCAGYIQGHRDACQGDSGGPLTCVKSGRWVLVGVVSWGK 250
Query: 1033 ACGAPNRPGVYTLTSTYASWIQHNVA 1110
C PNRPGVYT +TY+ WI+ +++
Sbjct: 251 GCALPNRPGVYTNVATYSPWIRAHLS 276
>ref|XP_547174.2| PREDICTED: similar to tryptase 5 [Canis familiaris].
Length = 628
Score = 246 bits (627), Expect = 4e-65
Identities = 122/251 (48%), Positives = 160/251 (63%), Gaps = 4/251 (1%)
Frame = +1
Query: 367 PQAQGRITGGSNSDPGQWPWQVSINYNGEHVCGGSLVSDQWVLSAAHCFPRDHSTSAYEV 546
P+ GRI G ++ GQWPWQVS+ NGEHVCGGSL+++ WVL+AAHCF ++ S+Y V
Sbjct: 96 PRMTGRIVSGQDAQLGQWPWQVSLRENGEHVCGGSLIAEDWVLTAAHCFHQNQPLSSYVV 155
Query: 547 KLGAHQLDSFSSS---MTVRTVAQVISHPSYLQEGSQGDIALLQLSSPVTFSRYIWPICL 717
LG+ + S+ + + VAQ I +P Y ++ GDIAL+QL+SPV F+ I P+CL
Sbjct: 156 LLGS--ISSYPQADEPQEFQAVAQFIIYPDYSEKLGTGDIALVQLASPVNFTDLILPVCL 213
Query: 718 PAANASFPNGLQCTVTGWGHVAPSVSLQRPRTLQQLEVPLISRETCNCLYNIDA-NPDEP 894
P NG C VTGWG++A + L P TL+++ VPLI +TC+ Y ++ NP +
Sbjct: 214 PKPGDPLGNGTWCWVTGWGNIAANQPLPPPFTLKEVNVPLIDTQTCDAYYQENSNNPSQE 273
Query: 895 HFIQQDMLCAGYVKGGKDACQGDSGGPLSCPAGGHWYLAGIVSWGDACGAPNRPGVYTLT 1074
I +DMLCAG+ G KDAC GDSGGPL C G W AGIVSWG CG P RPGVY
Sbjct: 274 PIIFEDMLCAGFESGQKDACGGDSGGPLVCDV-GVWTQAGIVSWGYDCGLPKRPGVYINV 332
Query: 1075 STYASWIQHNV 1107
S Y +WI +
Sbjct: 333 SVYTTWITSQI 343
Score = 109 bits (272), Expect = 6e-24
Identities = 79/243 (32%), Positives = 101/243 (41%), Gaps = 1/243 (0%)
Frame = +1
Query: 373 AQGRITGGSNSDPGQWPWQVSINYNGEHVCGGSLVSDQWVLSAAHCFPRDHSTSAYEVKL 552
A + GG + +PGQWPWQ S CG SL+S + VL A HCF +
Sbjct: 418 AAAHVVGGKDLEPGQWPWQGSQLRGRHQHCGASLLSCR-VLKAMHCFLK----------- 465
Query: 553 GAHQLDSFSSSMTVRTVAQVISHPSYLQEG-SQGDIALLQLSSPVTFSRYIWPICLPAAN 729
V +I +P + EG S DIALL+LSS VT+++YI PIC+ ++
Sbjct: 466 ----------------VKDIIIYPQF--EGTSLNDIALLKLSSSVTYNKYIQPICVMISS 507
Query: 730 ASFPNGLQCTVTGWGHVAPSVSLQRPRTLQQLEVPLISRETCNCLYNIDANPDEPHFIQQ 909
+ F N C VTGWG +I N +
Sbjct: 508 SKFQNQTNCWVTGWG-------------------------------DIQENQGD------ 530
Query: 910 DMLCAGYVKGGKDACQGDSGGPLSCPAGGHWYLAGIVSWGDACGAPNRPGVYTLTSTYAS 1089
GG AC+ G W GIVSWG CG PNRPGVYT S Y +
Sbjct: 531 --------SGGPLACE----------KRGLWIQVGIVSWGSGCGRPNRPGVYTNISAYFN 572
Query: 1090 WIQ 1098
WI+
Sbjct: 573 WIR 575
>ref|XP_547176.2| PREDICTED: similar to protease, serine, 22 [Canis familiaris].
Length = 308
Score = 229 bits (583), Expect = 6e-60
Identities = 117/245 (47%), Positives = 150/245 (61%), Gaps = 2/245 (0%)
Frame = +1
Query: 367 PQAQGRITGGSNSDPGQWPWQVSINYNGEHVCGGSLVSDQWVLSAAHCFPRD-HSTSAYE 543
PQ RI GG +S QWPW VS+ G H CGGSL S +WV++AAHCF + + S Y
Sbjct: 43 PQQLNRIVGGEDSPDAQWPWVVSLQKKGTHHCGGSLFSSRWVVTAAHCFKGNLNKPSEYS 102
Query: 544 VKLGAHQLDSFSSSMTVRTVAQVISHPSYL-QEGSQGDIALLQLSSPVTFSRYIWPICLP 720
V LGA QL + +A V+SHP Y +EGS+ DIAL++L V FS I PICLP
Sbjct: 103 VLLGAWQLGNPGPRSQEVGIAWVLSHPVYSWREGSRADIALVRLEHSVRFSERILPICLP 162
Query: 721 AANASFPNGLQCTVTGWGHVAPSVSLQRPRTLQQLEVPLISRETCNCLYNIDANPDEPHF 900
++ +C + GWG V V L P+TLQ+LEVP+I E C+ LY A +
Sbjct: 163 DSSVHLLPNTRCWIAGWGSVRDGVPLAHPQTLQKLEVPIIDSEICSRLYWRGAGQEA--- 219
Query: 901 IQQDMLCAGYVKGGKDACQGDSGGPLSCPAGGHWYLAGIVSWGDACGAPNRPGVYTLTST 1080
I +DMLCAGY++G +DAC GDSGGPL C G W LAGI+SWG+ C +RPGVY +
Sbjct: 220 ITEDMLCAGYLEGQRDACLGDSGGPLMCQVEGTWLLAGIISWGEGCAERDRPGVYISLAA 279
Query: 1081 YASWI 1095
+ SW+
Sbjct: 280 HRSWV 284
>ref|XP_547044.2| PREDICTED: similar to protease, serine, 36 [Canis familiaris].
Length = 855
Score = 227 bits (579), Expect = 2e-59
Identities = 117/291 (40%), Positives = 163/291 (56%), Gaps = 7/291 (2%)
Frame = +1
Query: 310 GLFQNGMGA----KGDAVSCGIVPQAQGRITGGSNSDPGQWPWQVSINYNGEHVCGGSLV 477
G FQN + + + + CG P+ RI GGS++ PG+WPWQVS++ +G H+CGGSLV
Sbjct: 19 GAFQNSALSSTQEEPEDLDCGR-PEPSARIMGGSDARPGRWPWQVSLHQSGSHICGGSLV 77
Query: 478 SDQWVLSAAHCFPRDHS---TSAYEVKLGAHQLDSFSSSMTVRTVAQVISHPSYLQEGSQ 648
+ WVLSAAHCF + + +A+ V LGAH + VR VA ++ Y
Sbjct: 78 APSWVLSAAHCFVTNGTLEPAAAWSVLLGAHSQAAAPDGAHVRAVAAILVPRDYSGVDRG 137
Query: 649 GDIALLQLSSPVTFSRYIWPICLPAANASFPNGLQCTVTGWGHVAPSVSLQRPRTLQQLE 828
D+ALL+L+SP + P+CLP A+ F +G C TGWG V + L P LQ++E
Sbjct: 138 ADLALLRLASPARLGPAVRPVCLPRASHRFAHGTTCWATGWGDVQEADPLPLPWVLQEVE 197
Query: 829 VPLISRETCNCLYNIDANPDEPHFIQQDMLCAGYVKGGKDACQGDSGGPLSCPAGGHWYL 1008
+ L+ C CLY+ + + MLCAGY +G +D CQGDSGGPL C G W+
Sbjct: 198 LRLLGEAACQCLYSRPGPFNLTFQLLPGMLCAGYPEGRRDTCQGDSGGPLVCEEDGRWFQ 257
Query: 1009 AGIVSWGDACGAPNRPGVYTLTSTYASWIQHNVAELQPQVGTHIGESEPDS 1161
AG+ S+G CG NRPG++T + Y +WI+ V +P EP S
Sbjct: 258 AGVTSFGFGCGRRNRPGIFTAVAPYEAWIREQVIGSEPGPAFPTQSWEPQS 308
Score = 109 bits (272), Expect = 6e-24
Identities = 88/286 (30%), Positives = 119/286 (41%), Gaps = 17/286 (5%)
Frame = +1
Query: 394 GSNSDPGQWPWQVSINYNGEHVCGGSLVSDQWVLSAAHCF---------PRDHSTSAYEV 546
G PG WPW+ + G C G+LVS+ WVL+ A CF PRD T + V
Sbjct: 326 GKAPRPGAWPWEAQVMVPGSRPCHGALVSESWVLAPASCFLDPINSDGPPRDLDT--WRV 383
Query: 547 KLGAHQLDSFSSSMTVRTVAQVISHPSYLQEGSQGDIALLQLSSPVTFSRYIWPICLPAA 726
L S VA+++ H + + + D+ALLQL +PV S P+CLP
Sbjct: 384 LL--------PSRPRAELVARLVPHDNASWDDA-SDLALLQLRAPVNLSTAPRPVCLPHP 434
Query: 727 NASFPNGLQCTVTGWGHVAPSVSLQRPRTLQQLEVPLISRETCNCLYNIDANPDEPHFIQ 906
F G +C + WG P+ P QLE L+ C+CLY P
Sbjct: 435 EHYFLPGSRCRLARWGRGEPA-----PGPNAQLEAELLGGWWCHCLYGRQGASVPPPGDP 489
Query: 907 QDMLCAGYVKGGK-DACQGDSGGPLSCPAGGHWYLAGIVSWGDACGAPNRPGVYTLTSTY 1083
LC Y + + C S L C G W+LAGI + C RP V+ T+
Sbjct: 490 PRALCPAYQEEEEAGGCWNYSHRSLLCQEEGTWFLAGISDFSSGC---LRPRVFHPLQTH 546
Query: 1084 ASWIQH--NVAELQPQVGTHIGE--SEPDSDLC---SNYGALHAAP 1200
WI H A L+ Q+ G E D+ C + +GA P
Sbjct: 547 GPWISHVTRGAYLEDQLTWDWGSEGEETDTQTCPPHTEHGACGLRP 592
Score = 91.3 bits (225), Expect = 2e-18
Identities = 68/207 (32%), Positives = 87/207 (42%), Gaps = 3/207 (1%)
Frame = +1
Query: 418 WPWQVSINYNGEHVCGGSLVSDQWVLSAAHCFPRDHSTSA--YEVKLGAHQLDSFSSSMT 591
WPW ++ G+ VC G LV+ WVL+A HC R ST+ EV LG
Sbjct: 601 WPWLAEVHVAGDRVCTGILVAPGWVLAATHCVLRPGSTTVPYIEVYLGRAGASPLPQGHQ 660
Query: 592 VRTVAQVISHPSYLQEGSQGDIALLQLSSPVTFSRYIWPICLPAANASFPNGLQCTVTGW 771
V V I P +L G + +ALL+L+S V S PICL P G C V GW
Sbjct: 661 VSRVVTSIRLPRHL--GLRPPLALLELNSRVEPSPSALPICLHP--GGIPLGASCWVLGW 716
Query: 772 GHVAPSVSLQRPRTLQQLEVPLISRETCNCLYNIDANPDEPHFIQQDMLCAGYVKGGKDA 951
R R V ++ C+CLY + LC Y +G +D
Sbjct: 717 KD-------PRDRVPVAAAVSILMPRLCHCLYQ--------GILPPGTLCVLYSEGQEDR 761
Query: 952 CQGDSGGPLSCPA-GGHWYLAGIVSWG 1029
C+ S PL C GG W L G+ G
Sbjct: 762 CEVTSAPPLLCQTEGGSWVLMGMAVRG 788
>ref|XP_853980.1| PREDICTED: similar to transmembrane protease, serine 5 [Canis
familiaris].
Length = 476
Score = 214 bits (546), Expect = 1e-55
Identities = 124/313 (39%), Positives = 163/313 (52%), Gaps = 9/313 (2%)
Frame = +1
Query: 220 SSQGPWSWAMAQREGL-----GPRGLAAVATLISLGLFQNGMGAKGDAVSCGIVPQAQGR 384
SSQG ++W + EGL PR A ++SL + CG P A R
Sbjct: 182 SSQG-FAWLSPRLEGLLEEVWQPRDSCASGLIVSLRCSE-----------CGARPLAS-R 228
Query: 385 ITGGSNSDPGQWPWQVSINYNGEHVCGGSLVSDQWVLSAAHCFP--RDHSTSAYEVKLGA 558
I GG PG WPWQ S+ H CGGS+++ +WV++AAHC R S++ V G
Sbjct: 229 IVGGQAVAPGSWPWQASVALGSRHTCGGSVLAPRWVVTAAHCMHSFRLFRLSSWRVHAGL 288
Query: 559 HQLDSFSSSMTVRTVAQVISHPSYLQEGSQGDIALLQLSSPVTFSRYIWPICLPAANASF 738
+ V ++I HP Y + DIALL+L +P+ FS + +CLPA F
Sbjct: 289 VSHSAVRPHQGA-VVERIIPHPLYSTQNHDYDIALLRLRTPLNFSDTVGAVCLPAEKQDF 347
Query: 739 PNGLQCTVTGWGHVAPSVSLQRPRTLQQLEVPLISRETCN--CLYNIDANPDEPHFIQQD 912
P G C V+GWGH PS + TLQ VPL++ + CN C+Y+ P
Sbjct: 348 PRGSHCWVSGWGHTDPSHT-HNSDTLQDTMVPLLNAQLCNSSCMYSGALTPR-------- 398
Query: 913 MLCAGYVKGGKDACQGDSGGPLSCPAGGHWYLAGIVSWGDACGAPNRPGVYTLTSTYASW 1092
MLCAGY+ G DACQGDSGGPL CP G W+L G+VSWG C PN PGVY + + W
Sbjct: 399 MLCAGYMDGRADACQGDSGGPLVCPDGDTWHLVGVVSWGRGCAEPNHPGVYAKVAEFLDW 458
Query: 1093 IQHNVAELQPQVG 1131
I H+ A + +VG
Sbjct: 459 I-HDTARVSVEVG 470
>ref|XP_536999.2| PREDICTED: similar to tryptase 4 [Canis familiaris].
Length = 287
Score = 209 bits (531), Expect = 6e-54
Identities = 108/245 (44%), Positives = 148/245 (60%), Gaps = 6/245 (2%)
Frame = +1
Query: 382 RITGGSNSDPGQWPWQVSINYNGEHVCGGSLVSDQWVLSAAHCFPRDHSTSAYEVKLGAH 561
R+ GG +S G+WPWQ S+ G H CG SL+S +WVL+AAHCF + + + V+ G
Sbjct: 21 RVVGGKDSQLGRWPWQGSLRLWGSHHCGASLLSRRWVLTAAHCFDKYNDPFEWSVQFG-- 78
Query: 562 QLDSFSSSMTVR------TVAQVISHPSYLQEGSQGDIALLQLSSPVTFSRYIWPICLPA 723
+L S S ++ +V ++ P YL S DIALL+LSS VT+++++ PIC+
Sbjct: 79 ELSSAPSIWNLQAYYNRYSVQEIFLSPMYLGASSY-DIALLKLSSSVTYNKFVQPICVMI 137
Query: 724 ANASFPNGLQCTVTGWGHVAPSVSLQRPRTLQQLEVPLISRETCNCLYNIDANPDEPHFI 903
+++ F N C VTGWG + + +L P LQ+++V +I+ CN LY A P I
Sbjct: 138 SSSEFQNRTDCWVTGWGDIQENQALPSPYVLQEVQVGIINTAICNYLY---AQPTFRRDI 194
Query: 904 QQDMLCAGYVKGGKDACQGDSGGPLSCPAGGHWYLAGIVSWGDACGAPNRPGVYTLTSTY 1083
DM+CAG GG+DAC GDSGGPL+C G W GIVSWG CG PNRPGVYT S +
Sbjct: 195 WGDMVCAGNPLGGQDACFGDSGGPLACEKRGLWIQVGIVSWGSGCGRPNRPGVYTNVSRH 254
Query: 1084 ASWIQ 1098
WI+
Sbjct: 255 FKWIR 259
>ref|XP_855225.1| PREDICTED: similar to epidermis-specific serine protease-like protein
[Canis familiaris].
Length = 442
Score = 205 bits (522), Expect = 7e-53
Identities = 109/260 (41%), Positives = 152/260 (58%), Gaps = 4/260 (1%)
Frame = +1
Query: 367 PQAQGRITGGSNSDPGQWPWQVSINYNGEHVCGGSLVSDQWVLSAAHCFPRDHSTSAYEV 546
P GR+ GG ++ G+WPWQVS+++ VCGGSL+SD+W+L+AAHC Y V
Sbjct: 25 PVYSGRVVGGQDAVAGRWPWQVSLHFGQTQVCGGSLISDRWILTAAHCLKGSWIPFLYTV 84
Query: 547 KLGAHQLDSFSSSMTVRTVAQVISHPSYLQEGSQGDIALLQLSSPVTFSRYIWPICLPAA 726
+LG+ + D S S+ R V ++I+HP + + DIALL+L S VTF+ +I PICLP+
Sbjct: 85 RLGSIKNDQSSQSVNHR-VFKIITHPQI--QHTSADIALLKLVSRVTFTSFILPICLPSI 141
Query: 727 NASFPNGLQCTVTGWGHVAPS--VSLQRPRTLQQLEVPLISRETCNCLYNI--DANPDEP 894
C VTGWG V S + P LQ+ E+P+ + + C LYN A P+
Sbjct: 142 TKQLKIPASCWVTGWGTVKESEGENGDYPSILQEAEIPIFNHQACEKLYNPIGPALPELE 201
Query: 895 HFIQQDMLCAGYVKGGKDACQGDSGGPLSCPAGGHWYLAGIVSWGDACGAPNRPGVYTLT 1074
IQ D +CAG + KD+C+GDSGGPLSC G W G+VSWG C A + PGVYT
Sbjct: 202 SVIQDDEICAGDILNKKDSCKGDSGGPLSCHINGVWIQIGLVSWGIGC-AESLPGVYTSV 260
Query: 1075 STYASWIQHNVAELQPQVGT 1134
Y WI+ ++ + +G+
Sbjct: 261 IYYQKWIKTTISRAERFLGS 280
>ref|XP_539294.2| PREDICTED: similar to airway trypsin-like 5 [Canis familiaris].
Length = 431
Score = 205 bits (522), Expect = 7e-53
Identities = 107/251 (42%), Positives = 141/251 (56%), Gaps = 4/251 (1%)
Frame = +1
Query: 355 CGI---VPQAQGRITGGSNSDPGQWPWQVSINYNGEHVCGGSLVSDQWVLSAAHCFPRDH 525
CGI + RI GGSN+ G+WPWQ ++ NG+H CG SL+S++++++AAHCF +
Sbjct: 187 CGIRARMSATYDRIKGGSNAQKGEWPWQATLKKNGQHHCGASLISERYLVTAAHCFQKTK 246
Query: 526 STSAYEVKLGAHQLDSFSSSMTVRTVAQVISHPSYLQEGSQGDIALLQLSSPVTFSRYIW 705
+ Y V G + R V Q+I H Y+Q DIA++QLS V F +
Sbjct: 247 NPKNYTVSFGTRVNPPYMQ----RYVQQIIVHEDYIQGEHHDDIAVIQLSEKVLFQNDVH 302
Query: 706 PICLPAANASFPNGLQCTVTGWGHVAPSVSLQRPRTLQQLEVPLISRETCNCLYNIDANP 885
+CLP A FP G VTGWG A S + + P LQ+ V +I TCN D
Sbjct: 303 RVCLPEATQVFPPGEGVVVTGWG--AFSYNGKYPEVLQKAPVKIIDTNTCNAREGYDG-- 358
Query: 886 DEPHFIQQDMLCAGYVKGGKDACQGDSGGPLSCPAGGH-WYLAGIVSWGDACGAPNRPGV 1062
+ MLCAGY++G KDACQGDSGGPL P + WYL GIVSWG+ CG N+PGV
Sbjct: 359 ----LVSDTMLCAGYLEGNKDACQGDSGGPLVHPNSRNIWYLVGIVSWGEKCGEVNKPGV 414
Query: 1063 YTLTSTYASWI 1095
Y + Y +WI
Sbjct: 415 YMRVTAYRNWI 425
Database: RefSeq49_CP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,874,504
Number of sequences in database: 33,336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33336
Number of Hits to DB: 53,644,961
Number of extensions: 1574900
Number of successful extensions: 8088
Number of sequences better than 1.0e-05: 134
Number of HSP's gapped: 7645
Number of HSP's successfully gapped: 142
Length of query: 423
Length of database: 18,874,504
Length adjustment: 105
Effective length of query: 318
Effective length of database: 15,374,224
Effective search space: 4889003232
Effective search space used: 4889003232
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to RefSeqSP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-013283
(1270 letters)
Database: RefSeq49_SP.fasta
24,897 sequences; 11,343,932 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_003124520.1| PREDICTED: prostasin-like [Sus scrofa]. 666 0.0
Alignment gi|XP_003124543.1| PREDICTED: polyserase-2 [Sus scrofa]. 229 2e-60
Alignment gi|XP_003124793.1| PREDICTED: brain-specific serine protease 4-... 228 7e-60
Alignment gi|NP_999356.1| tryptase precursor [Sus scrofa]. 207 1e-53
Alignment gi|XP_003129892.1| PREDICTED: transmembrane protease serine 5 [... 207 1e-53
Alignment gi|XP_003354043.1| PREDICTED: transmembrane protease serine 9 [... 207 1e-53
Alignment gi|XP_003355405.1| PREDICTED: transmembrane protease serine 6-l... 204 8e-53
Alignment gi|XP_003133871.2| PREDICTED: serine protease 40-like [Sus scro... 202 4e-52
Alignment gi|NP_001001259.1| enteropeptidase proprotein [Sus scrofa]. 202 4e-52
Alignment gi|XP_003133867.2| PREDICTED: putative serine protease 47-like ... 200 2e-51
>ref|XP_003124520.1| PREDICTED: prostasin-like [Sus scrofa].
Length = 344
Score = 666 bits (1718), Expect = 0.0
Identities = 316/320 (98%), Positives = 318/320 (99%)
Frame = +1
Query: 247 MAQREGLGPRGLAAVATLISLGLFQNGMGAKGDAVSCGIVPQAQGRITGGSNSDPGQWPW 426
MAQREGLGPRGLAAVATLISLGLFQNGMGAKGDAVSCGIVPQAQGRITGGSNSDPGQWPW
Sbjct: 1 MAQREGLGPRGLAAVATLISLGLFQNGMGAKGDAVSCGIVPQAQGRITGGSNSDPGQWPW 60
Query: 427 QVSINYNGEHVCGGSLVSDQWVLSAAHCFPRDHSTSAYEVKLGAHQLDSFSSSMTVRTVA 606
QVSINYNGEHVCGGSLVSDQWVLSAAHCFPRDHSTSAYEVKLGAHQLDSFSSSMTVRTVA
Sbjct: 61 QVSINYNGEHVCGGSLVSDQWVLSAAHCFPRDHSTSAYEVKLGAHQLDSFSSSMTVRTVA 120
Query: 607 QVISHPSYLQEGSQGDIALLQLSSPVTFSRYIWPICLPAANASFPNGLQCTVTGWGHVAP 786
QVISHPSYLQEGS+GDIALLQLSSPVTFSRYIWPICLPAANASFPNGLQCTVTGWGHVAP
Sbjct: 121 QVISHPSYLQEGSEGDIALLQLSSPVTFSRYIWPICLPAANASFPNGLQCTVTGWGHVAP 180
Query: 787 SVSLQRPRTLQQLEVPLISRETCNCLYNIDANPDEPHFIQQDMLCAGYVKGGKDACQGDS 966
SVSLQRPRTLQQLEVPLISRETCNCLYNIDANPDEPHFIQQDMLCAGYVKGGKDACQGDS
Sbjct: 181 SVSLQRPRTLQQLEVPLISRETCNCLYNIDANPDEPHFIQQDMLCAGYVKGGKDACQGDS 240
Query: 967 GGPLSCPAGGHWYLAGIVSWGDACGAPNRPGVYTLTSTYASWIQHNVAELQPQVGTHIGE 1146
GGPLSCPAGGHWYLAGIVSWGDACGAPNRPGVYTLTSTYASWIQHNVAELQPQV HIGE
Sbjct: 241 GGPLSCPAGGHWYLAGIVSWGDACGAPNRPGVYTLTSTYASWIQHNVAELQPQVVPHIGE 300
Query: 1147 SEPDSDLCSNYGALHAAPAW 1206
SEPDSDLCSNYGAL+AAPAW
Sbjct: 301 SEPDSDLCSNYGALNAAPAW 320
>ref|XP_003124543.1| PREDICTED: polyserase-2 [Sus scrofa].
Length = 855
Score = 229 bits (584), Expect = 2e-60
Identities = 114/276 (41%), Positives = 154/276 (55%), Gaps = 3/276 (1%)
Frame = +1
Query: 349 VSCGIVPQAQGRITGGSNSDPGQWPWQVSINYNGEHVCGGSLVSDQWVLSAAHCFPRDHS 528
+ CG P+ RI GGS++ PG WPWQVS++ G H+CGGSL++ WVLSAAHCF + +
Sbjct: 36 LDCGR-PEPSARIMGGSDARPGTWPWQVSLHQGGGHICGGSLIAPSWVLSAAHCFMNNGT 94
Query: 529 ---TSAYEVKLGAHQLDSFSSSMTVRTVAQVISHPSYLQEGSQGDIALLQLSSPVTFSRY 699
+ + V LG H D +R VA ++ +Y D+ALL+L+SP
Sbjct: 95 LEPAAEWSVVLGVHSQDGPLDGAHIRAVAAILVPDNYSSVEQGADVALLRLASPARLGPA 154
Query: 700 IWPICLPAANASFPNGLQCTVTGWGHVAPSVSLQRPRTLQQLEVPLISRETCNCLYNIDA 879
+ P+CLP A+ F G C TGWG V + L P LQ++E+ L+ C CLY+
Sbjct: 155 VRPVCLPRASHRFARGTACWATGWGDVQEADPLPLPWALQEVELRLLGEAACQCLYSRPG 214
Query: 880 NPDEPHFIQQDMLCAGYVKGGKDACQGDSGGPLSCPAGGHWYLAGIVSWGDACGAPNRPG 1059
+ + MLCAGY +G +D CQGDSGGPL C GG W+ AGI S+G CG NRPG
Sbjct: 215 PFNLTFQLLPGMLCAGYPEGRRDTCQGDSGGPLVCEEGGRWFQAGITSFGFGCGRRNRPG 274
Query: 1060 VYTLTSTYASWIQHNVAELQPQVGTHIGESEPDSDL 1167
V+T + Y +WI+ V +P EP S L
Sbjct: 275 VFTAVAPYEAWIREKVMGSEPGPAFPTQSPEPQSGL 310
Score = 93.6 bits (231), Expect = 2e-19
Identities = 79/273 (28%), Positives = 110/273 (40%), Gaps = 9/273 (3%)
Frame = +1
Query: 409 PGQWPWQVSINYNGEHVCGGSLVSDQWVLSAAHCFPRDHSTSAYEVKL-GAHQLDSFSSS 585
PG WPW+ + G C G+LVS+ W+L+ A CF S+ L H L S
Sbjct: 331 PGAWPWEAQVMVPGSRPCYGALVSESWLLAPASCFSGRVSSDQPPGDLENWHVL--LPSR 388
Query: 586 MTVRTVAQVISHPSYLQEGSQGDIALLQLSSPVTFSRYIWPICLPAANASFPNGLQCTVT 765
VA+++ H + + + D+ALLQL PV S P+CLP F G +C +
Sbjct: 389 PRAEQVARLVLHENASWDDA-SDLALLQLRVPVNLSAAPRPVCLPHPEHYFLPGSRCRLA 447
Query: 766 GWGHVAPSVSLQRPRTLQQLEVPLISRETCNCLYNIDANPDEPHFIQQDMLCAGYVKGG- 942
WG + P LE L+ C+CLY P LC Y +
Sbjct: 448 RWGRGEAA-----PGPSSLLEAELLGAWWCHCLYGHQRASVPPPGEPPQALCPAYQEEEV 502
Query: 943 KDACQGDSGGPLSCPAGGHWYLAGIVSWGDACGAPNRPGVYTLTSTYASWIQHNVAE--L 1116
C S L C G W+LAGI + C RP + + WI H E +
Sbjct: 503 AGHCWNYSHWSLLCREEGTWFLAGIRDFPSDC---LRPRAFYPLQIHGPWISHVTREAYV 559
Query: 1117 QPQVGTHIGE--SEPDSDLC---SNYGALHAAP 1200
+ Q+ G E ++ C + YGA P
Sbjct: 560 EDQLAWDWGPEGEETETQTCPPHTEYGACGLLP 592
Score = 90.5 bits (223), Expect = 2e-18
Identities = 71/235 (30%), Positives = 95/235 (40%), Gaps = 3/235 (1%)
Frame = +1
Query: 418 WPWQVSINYNGEHVCGGSLVSDQWVLSAAHCFPRDHSTSA--YEVKLGAHQLDSFSSSMT 591
WPW ++ E VC G LV+ WVL+A HC R ST+ EV LG S
Sbjct: 601 WPWLAEVHVARERVCTGILVTPGWVLAATHCVLRPGSTTVPYIEVYLGRAGASPLPQSHQ 660
Query: 592 VRTVAQVISHPSYLQEGSQGDIALLQLSSPVTFSRYIWPICLPAANASFPNGLQCTVTGW 771
+ I P +L G + +ALL+LSS V S PICL P G C V GW
Sbjct: 661 LSRSIISIRLPRHL--GLRPPLALLELSSRVEPSPSALPICLQP--GGLPLGASCWVLGW 716
Query: 772 GHVAPSVSLQRPRTLQQLEVPLISRETCNCLYNIDANPDEPHFIQQDMLCAGYVKGGKDA 951
+ R V +++ C+CLY + LC Y +G +D+
Sbjct: 717 KD-------PQDRVPVAAAVSILTARLCHCLYQ--------GILPPGTLCVLYAEGQEDS 761
Query: 952 CQGDSGGPLSCPA-GGHWYLAGIVSWGDACGAPNRPGVYTLTSTYASWIQHNVAE 1113
C+ S PL C GG W L G+ G ++ +WI V E
Sbjct: 762 CEVTSAPPLLCQTEGGSWVLVGMALRGSR-------ELFAAVGPEETWISQTVGE 809
>ref|XP_003124793.1| PREDICTED: brain-specific serine protease 4-like [Sus scrofa].
Length = 338
Score = 228 bits (580), Expect = 7e-60
Identities = 118/270 (43%), Positives = 158/270 (58%), Gaps = 2/270 (0%)
Frame = +1
Query: 352 SCGIVPQAQGRITGGSNSDPGQWPWQVSINYNGEHVCGGSLVSDQWVLSAAHCFPRD-HS 528
+CG PQ RI GG +S +WPW VSI NG H C GSL++ WV++AAHCF +
Sbjct: 40 ACG-KPQQLNRIVGGEDSMDAEWPWVVSIQKNGTHHCAGSLLTSHWVVTAAHCFKGSLNK 98
Query: 529 TSAYEVKLGAHQLDSFSSSMTVRTVAQVISHPSYL-QEGSQGDIALLQLSSPVTFSRYIW 705
+ + V LGA QL + +A+V HP Y +EGS+ DIAL+ L + FS +
Sbjct: 99 LAQFSVLLGAWQLGNPGPRSQEVGIARVQPHPVYSWKEGSRADIALVHLERSIQFSERVL 158
Query: 706 PICLPAANASFPNGLQCTVTGWGHVAPSVSLQRPRTLQQLEVPLISRETCNCLYNIDANP 885
PICLP ++ P G C + GWG + V L RP+TLQ+L+VP+I C+ LY
Sbjct: 159 PICLPDSSVRLPPGTDCWIAGWGSIHDGVPLPRPQTLQKLKVPIIDSGICSRLYWRGTGE 218
Query: 886 DEPHFIQQDMLCAGYVKGGKDACQGDSGGPLSCPAGGHWYLAGIVSWGDACGAPNRPGVY 1065
+ +DMLCAGY++G +DAC GDSGGPL C G W LAG++SWG+ C NRPGVY
Sbjct: 219 GA---VTEDMLCAGYLEGQRDACLGDSGGPLMCQVEGTWLLAGVISWGEGCAERNRPGVY 275
Query: 1066 TLTSTYASWIQHNVAELQPQVGTHIGESEP 1155
+ + SW+Q V + Q+G H S P
Sbjct: 276 ISLAAHRSWVQRIVQGV--QLGGHAQGSRP 303
>ref|NP_999356.1| tryptase precursor [Sus scrofa].
Length = 275
Score = 207 bits (527), Expect = 1e-53
Identities = 104/242 (42%), Positives = 144/242 (59%), Gaps = 5/242 (2%)
Frame = +1
Query: 385 ITGGSNSDPGQWPWQVSI---NYNGEHVCGGSLVSDQWVLSAAHCFPRDHSTSAY-EVKL 552
I GG + +WPWQVS+ + +H CGGSL+ QWVL+AAHCF + + Y V+L
Sbjct: 31 IVGGKEAPGHKWPWQVSLRCLDQYWKHFCGGSLIHPQWVLTAAHCFGPEKADPLYIRVQL 90
Query: 553 GAHQLDSFSSSMTVRTVAQVISHPSYLQEGSQGDIALLQLSSPVTFSRYIWPICLPAANA 732
G L + + + V+++I HP+Y E + DIALL+L PV S ++ P+ LP A+
Sbjct: 91 GEQHL-YYQDRLLL--VSRIIVHPNYYDEVNGADIALLELEDPVNLSSHVQPVTLPPASE 147
Query: 733 SFPNGLQCTVTGWGHVAPSVSLQRPRTLQQLEVPLISRETCNCLYNID-ANPDEPHFIQQ 909
+FP G +C VTGWG V L P L+Q+ VP++ C+ Y++ + D ++
Sbjct: 148 TFPKGTRCWVTGWGDVHSGWPLPPPYPLKQVRVPIVENSECDMQYHLGLSTGDNIPIVRD 207
Query: 910 DMLCAGYVKGGKDACQGDSGGPLSCPAGGHWYLAGIVSWGDACGAPNRPGVYTLTSTYAS 1089
DMLCAG G D+CQGDSGGPL C G W AG+VSWG+ C PNRPG+YT + Y
Sbjct: 208 DMLCAG--SEGHDSCQGDSGGPLVCRVNGTWLQAGVVSWGEGCALPNRPGIYTRVTHYLD 265
Query: 1090 WI 1095
WI
Sbjct: 266 WI 267
>ref|XP_003129892.1| PREDICTED: transmembrane protease serine 5 [Sus scrofa].
Length = 459
Score = 207 bits (526), Expect = 1e-53
Identities = 112/257 (43%), Positives = 143/257 (55%), Gaps = 9/257 (3%)
Frame = +1
Query: 355 CGIVPQAQGRITGGSNSDPGQWPWQVSINYNGEHVCGGSLVSDQWVLSAAHCFP--RDHS 528
CG P A RI GG PG+WPWQ S+ H CGGS+++ WV++AAHC R
Sbjct: 213 CGARPLAS-RIVGGQAVAPGRWPWQASVALGSRHTCGGSVLAPSWVVTAAHCTHSFRLSR 271
Query: 529 TSAYEVKLGAHQLDSFSSSMTVR-----TVAQVISHPSYLQEGSQGDIALLQLSSPVTFS 693
S++ V +G S TVR V ++I+HP Y + D+ALLQL +P+ FS
Sbjct: 272 LSSWRVHVG------LVSHSTVRPHQGAVVERIIAHPLYSAQNHDYDLALLQLRTPLHFS 325
Query: 694 RYIWPICLPAANASFPNGLQCTVTGWGHVAPSVSLQRPRTLQQLEVPLISRETCN--CLY 867
+ +CLP +FP G QC V+GWGH PS + TLQ VPL+S + CN C+Y
Sbjct: 326 DTVGAVCLPTEEQAFPRGSQCWVSGWGHTDPSHT-HSSDTLQDTVVPLLSTQLCNSSCVY 384
Query: 868 NIDANPDEPHFIQQDMLCAGYVKGGKDACQGDSGGPLSCPAGGHWYLAGIVSWGDACGAP 1047
+ P MLCAGY+ G DACQGDSGGPL C G W L G+VSWG C P
Sbjct: 385 SGALTPR--------MLCAGYLDGRADACQGDSGGPLVCLDGDTWRLVGVVSWGHGCAEP 436
Query: 1048 NRPGVYTLTSTYASWIQ 1098
N PGVY+ + + WIQ
Sbjct: 437 NHPGVYSKVAEFLDWIQ 453
>ref|XP_003354043.1| PREDICTED: transmembrane protease serine 9 [Sus scrofa].
Length = 1059
Score = 207 bits (526), Expect = 1e-53
Identities = 102/250 (40%), Positives = 145/250 (58%), Gaps = 3/250 (1%)
Frame = +1
Query: 355 CGIVP--QAQGRITGGSNSDPGQWPWQVSINYNGEHVCGGSLVSDQWVLSAAHCFPRDHS 528
CG+ P + GRI GG + PG++PWQVS+ N EH CG +++S +W++SAAHCF
Sbjct: 191 CGLQPGWRTVGRIVGGVEAAPGEFPWQVSLRENNEHFCGAAVISARWLVSAAHCFNEFQD 250
Query: 529 TSAYEVKLGAHQLDSFSSSMTVRTVAQVISHPSYLQEGSQGDIALLQLSSPVTFSRYIWP 708
+ + V G L +S VA++I+HP Y + + D+A+L+L P+ FSR++ P
Sbjct: 251 PTEWVVYAGTTYLSGLEASTVRARVARIITHPLYNSDTADFDVAVLELGGPLPFSRHVQP 310
Query: 709 ICLPAANASFPNGLQCTVTGWGHVAPSVSLQRPRTLQQLEVPLISRETCNCLYNIDANPD 888
+CLPAA FP +C ++GWG++ L +P LQ+ V L+ + C LY
Sbjct: 311 VCLPAATHVFPPRKKCLISGWGYLKEDF-LVKPEMLQKATVELLDQALCANLYG------ 363
Query: 889 EPHFIQQDMLCAGYVKGGKDACQGDSGGPLSC-PAGGHWYLAGIVSWGDACGAPNRPGVY 1065
H + M+CAGY+ G D+CQGDSGGPL C G ++LAGIVSWG C RPGVY
Sbjct: 364 --HSLTDRMVCAGYLDGKVDSCQGDSGGPLVCEEPSGRFFLAGIVSWGIGCAEARRPGVY 421
Query: 1066 TLTSTYASWI 1095
+ WI
Sbjct: 422 ARVTRLRDWI 431
Score = 192 bits (488), Expect = 3e-49
Identities = 106/256 (41%), Positives = 137/256 (53%), Gaps = 3/256 (1%)
Frame = +1
Query: 355 CGIVPQAQ-GRITGGSNSDPGQWPWQVSINYNG-EHVCGGSLVSDQWVLSAAHCFPRDHS 528
CG+ P A RI GGS + G+WPWQVS+ EH CG LV+++W+LSAAHCF
Sbjct: 816 CGLAPAAALTRIVGGSAAGRGEWPWQVSLWLRRREHRCGAVLVAERWLLSAAHCFDVYGD 875
Query: 529 TSAYEVKLGAHQLDSFSSSMTVRTVAQVISHPSYLQEGSQGDIALLQLSSPVTFSRYIWP 708
+ LG L + V ++ HP Y D+ALL+L+ PV SR + P
Sbjct: 876 PKQWAAFLGTPFLSGADGQL--ERVVRIHKHPFYNVYTLDYDVALLELAGPVRRSRLVRP 933
Query: 709 ICLPAANASFPNGLQCTVTGWGHVAPSVSLQRPRTLQQLEVPLISRETCNCLYNIDANPD 888
ICLP P+G +C +TGWG V S+ R LQ+ V L+S +TC Y
Sbjct: 934 ICLPEPGPRPPDGARCVITGWGSVREGGSM--ARQLQKAAVRLLSEQTCRRFY------- 984
Query: 889 EPHFIQQDMLCAGYVKGGKDACQGDSGGPLSC-PAGGHWYLAGIVSWGDACGAPNRPGVY 1065
P I MLCAG+ +GG D+C GD+GGPL+C G W L G+ SWG CG P PGVY
Sbjct: 985 -PVQISSRMLCAGFPQGGVDSCSGDAGGPLACRDPSGRWVLTGVTSWGYGCGRPQFPGVY 1043
Query: 1066 TLTSTYASWIQHNVAE 1113
T + WI N+ E
Sbjct: 1044 TRVAAVRGWIWQNIQE 1059
Score = 191 bits (485), Expect = 7e-49
Identities = 96/250 (38%), Positives = 138/250 (55%), Gaps = 3/250 (1%)
Frame = +1
Query: 355 CGIVPQAQG--RITGGSNSDPGQWPWQVSINYNGEHVCGGSLVSDQWVLSAAHCFPRDHS 528
CG+ P + RI GG + G+ PWQVS+ H CG ++V D+W+LSAAHCF
Sbjct: 492 CGVRPALEKPTRIVGGFGAASGEVPWQVSLKEGSRHFCGATVVGDRWLLSAAHCFNHT-K 550
Query: 529 TSAYEVKLGAHQLDSFSSSMTVRTVAQVISHPSYLQEGSQGDIALLQLSSPVTFSRYIWP 708
LG L S S + + + HP Y D+A+L+L+ P+ F++Y+ P
Sbjct: 551 VELVRAHLGTTSLSGISGSPVKMGLRRAVLHPQYNPSILDFDVAVLELARPLVFNKYVQP 610
Query: 709 ICLPAANASFPNGLQCTVTGWGHVAPSVSLQRPRTLQQLEVPLISRETCNCLYNIDANPD 888
+CLP A FP G +C ++GWG+ + +P LQ+ V +I ++ C+ LYN
Sbjct: 611 VCLPLAIQKFPVGRKCMISGWGNTQEG-NATKPDILQRASVGIIDQKACSALYNFS---- 665
Query: 889 EPHFIQQDMLCAGYVKGGKDACQGDSGGPLSC-PAGGHWYLAGIVSWGDACGAPNRPGVY 1065
+ M+CAG+++G D+CQGDSGGPL+C G +YLAGIVSWG C +PGVY
Sbjct: 666 ----LTDRMICAGFLEGKVDSCQGDSGGPLACEETPGVFYLAGIVSWGIGCAQAKKPGVY 721
Query: 1066 TLTSTYASWI 1095
T + WI
Sbjct: 722 TRITRLKGWI 731
>ref|XP_003355405.1| PREDICTED: transmembrane protease serine 6-like [Sus scrofa].
Length = 509
Score = 204 bits (519), Expect = 8e-53
Identities = 108/259 (41%), Positives = 146/259 (56%), Gaps = 3/259 (1%)
Frame = +1
Query: 331 GAKGDAVSCGIVPQAQGRITGGSNSDPGQWPWQVSINYNGEHVCGGSLVSDQWVLSAAHC 510
G+ CG+ + GRI GG+ S G+WPWQ S+ G H+CGG+L++D+WV++AAHC
Sbjct: 258 GSDEQHCDCGLQGPS-GRIVGGAVSSEGEWPWQASLQVRGRHICGGALIADRWVITAAHC 316
Query: 511 FPRDH--STSAYEVKLGAHQLDSFSSSMTVRTVAQVISHPSYLQEGSQGDIALLQLSSPV 684
F D S + + V LG S V++++ HP + ++ D+ALLQL PV
Sbjct: 317 FQEDSMASPALWTVYLGKVWQSSRWPGEVSFKVSRLLLHPYHEEDSHDYDVALLQLDHPV 376
Query: 685 TFSRYIWPICLPAANASFPNGLQCTVTGWGHVAPSVSLQRPRTLQQLEVPLISRETCNCL 864
S + P+CLPA + F GL C +TGWG + LQ+++V LI ++ C+
Sbjct: 377 VRSAAVHPVCLPARSHFFEPGLHCWITGWGALREGGPTS--NGLQKVDVQLIPQDLCSEA 434
Query: 865 YNIDANPDEPHFIQQDMLCAGYVKGGKDACQGDSGGPLSC-PAGGHWYLAGIVSWGDACG 1041
Y P MLCAGY +G KDACQGDSGGPL C G W+LAG+VSWG CG
Sbjct: 435 YRYQVTP--------RMLCAGYRRGKKDACQGDSGGPLVCKEPSGRWFLAGLVSWGLGCG 486
Query: 1042 APNRPGVYTLTSTYASWIQ 1098
PN GVYT + WIQ
Sbjct: 487 RPNYFGVYTRITGVIGWIQ 505
>ref|XP_003133871.2| PREDICTED: serine protease 40-like [Sus scrofa].
Length = 458
Score = 202 bits (513), Expect = 4e-52
Identities = 102/283 (36%), Positives = 147/283 (51%), Gaps = 4/283 (1%)
Frame = +1
Query: 355 CGIVPQAQGRITGGSNSDPGQWPWQVSINYNGEHVCGGSLVSDQWVLSAAHCFPRDHSTS 534
CGI P G+I GG ++ +WPWQ S+ Y G H+CG ++VS WV+SAAHCF + H
Sbjct: 151 CGI-PAVTGKIFGGRDAPQKRWPWQASVLYRGMHICGATIVSAYWVISAAHCFQKSHHPD 209
Query: 535 AYEVKLGAHQLDSFSSSMTVRTVAQVISHPSYLQEGSQG-DIALLQLSSPVTFSRYIWPI 711
Y++ LG ++L S + +V +V H + + G DI LLQL PV F+ YI P
Sbjct: 210 DYQILLGYYRLKSPTQHSLQMSVYRVFVHNDFNKRYFMGSDITLLQLYGPVNFTEYIRPA 269
Query: 712 CLPAANASFPNGLQCTVTGWGHVAPSVSLQRPRTLQQLEVPLISRETCNCLYNIDANPDE 891
CLP N + C +TGWG V + L P TLQ+ ++ ++ + C + +
Sbjct: 270 CLPGRNPQVSSSASCWITGWGMVTETTMLGDPYTLQEAQLGIMDSQICTMFFQGPQPGNN 329
Query: 892 PHFIQQDMLCAGYVKGGKDACQGDSGGPLSCPAGGHWYLAGIVSWGDACGAPNRPGVYTL 1071
+ +Q DMLCAG + GK C+GDSGGP C W+L G+ SW C P P V+T
Sbjct: 330 TYSVQDDMLCAGDLMTGKSICRGDSGGPFVCNLNNVWFLIGLSSWSLPCQQPVSPSVFTR 389
Query: 1072 TSTYASWI---QHNVAELQPQVGTHIGESEPDSDLCSNYGALH 1191
S ++ WI Q++ P H P + + G +H
Sbjct: 390 VSYFSEWITQKQNSSPNPDPSSVPHPPSVPPGVPIFPSLGNIH 432
>ref|NP_001001259.1| enteropeptidase proprotein [Sus scrofa].
Length = 1034
Score = 202 bits (513), Expect = 4e-52
Identities = 104/255 (40%), Positives = 145/255 (56%), Gaps = 6/255 (2%)
Frame = +1
Query: 352 SCG---IVPQAQGRITGGSNSDPGQWPWQVSINYNGEHVCGGSLVSDQWVLSAAHC-FPR 519
SCG + + +I GG++S G WPW V++ YNG+ +CG SLVS W++SAAHC + R
Sbjct: 786 SCGKKQVAQEVSPKIVGGNDSREGAWPWVVALYYNGQLLCGASLVSRDWLVSAAHCVYGR 845
Query: 520 DHSTSAYEVKLGAHQLDSFSSSMTV-RTVAQVISHPSYLQEGSQGDIALLQLSSPVTFSR 696
+ S ++ LG H + +S V R + +++ +P Y + DIA++ L V ++
Sbjct: 846 NLEPSKWKAILGLHMTSNLTSPQIVTRLIDEIVINPHYNRRRKDSDIAMMHLEFKVNYTD 905
Query: 697 YIWPICLPAANASFPNGLQCTVTGWGHVAPSVSLQRPRTLQQLEVPLISRETCNCLYNID 876
YI PICLP N FP G C++ GWG V S LQ+ +VPL+S E C
Sbjct: 906 YIQPICLPEENQVFPPGRICSIAGWGKVIYQGS--PADILQEADVPLLSNEKCQ------ 957
Query: 877 ANPDEPHF-IQQDMLCAGYVKGGKDACQGDSGGPLSCPAGGHWYLAGIVSWGDACGAPNR 1053
P + I ++M+CAGY +GG D+CQGDSGGPL C W LAG+ S+G C PNR
Sbjct: 958 --QQMPEYNITENMMCAGYEEGGIDSCQGDSGGPLMCLENNRWLLAGVTSFGYQCALPNR 1015
Query: 1054 PGVYTLTSTYASWIQ 1098
PGVY + WIQ
Sbjct: 1016 PGVYARVPKFTEWIQ 1030
>ref|XP_003133867.2| PREDICTED: putative serine protease 47-like [Sus scrofa].
Length = 420
Score = 200 bits (508), Expect = 2e-51
Identities = 117/315 (37%), Positives = 162/315 (51%), Gaps = 2/315 (0%)
Frame = +1
Query: 157 PFPPVPTLGTQP*VPSLRCPVSSQGPWSWAMAQREGLGPRGLAAVATLISLGLFQNGMGA 336
P+ P TL +LR + GP A+ EG GP T + L G
Sbjct: 64 PWSPTTTL-------NLRGSWADPGPAPAALRAEEG-GP------LTPEAQPLAWAATGG 109
Query: 337 KGDAVSCGIVPQAQGRITGGSNSDPGQWPWQVSINYNGEHVCGGSLVSDQWVLSAAHCF- 513
+G + +CG P+ RI+GG + GQWPWQ S+ Y G HVCG L++ +W++SAAHCF
Sbjct: 110 RGVSTACG-KPKVMWRISGGQDVVAGQWPWQASLMYQGLHVCGAVLINSRWLVSAAHCFL 168
Query: 514 PRDHSTSAYEVKLGAHQLDSFSSSMTVRTVAQVISHPSYLQEGSQG-DIALLQLSSPVTF 690
+ H+ Y V LG+ QL + +V+Q++ HP + + G DIA+LQL PV F
Sbjct: 169 KKSHAPENYRVLLGSTQLFEHTQHTLEMSVSQIVMHPDFEKLHPFGSDIAMLQLLFPVNF 228
Query: 691 SRYIWPICLPAANASFPNGLQCTVTGWGHVAPSVSLQRPRTLQQLEVPLISRETCNCLYN 870
+ YI P CLPA N C +TGWG + + L P LQ+ +V LI + CN +Y
Sbjct: 229 TSYIIPACLPAPGLQLLNNASCWITGWGMLNEEMPLPTPFHLQEAKVGLIENQFCNLVYG 288
Query: 871 IDANPDEPHFIQQDMLCAGYVKGGKDACQGDSGGPLSCPAGGHWYLAGIVSWGDACGAPN 1050
+ + + ++MLC G GK C GDSGGPL C W L G+ SWG C P
Sbjct: 289 HRLSKN--FSVYEEMLCVGDFSTGKAICHGDSGGPLICDLLSSWVLVGLASWGLDCRHPT 346
Query: 1051 RPGVYTLTSTYASWI 1095
P +T S ++ WI
Sbjct: 347 YPSNFTNVSYFSHWI 361
Database: RefSeq49_SP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 11,343,932
Number of sequences in database: 24,897
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 24897
Number of Hits to DB: 33,322,973
Number of extensions: 994652
Number of successful extensions: 5065
Number of sequences better than 1.0e-05: 105
Number of HSP's gapped: 4739
Number of HSP's successfully gapped: 114
Length of query: 423
Length of database: 11,343,932
Length adjustment: 102
Effective length of query: 321
Effective length of database: 8,804,438
Effective search space: 2826224598
Effective search space used: 2826224598
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to RefSeqMP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-013283
(1270 letters)
Database: RefSeq49_MP.fasta
30,036 sequences; 15,617,559 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_579929.1| prostasin [Mus musculus]. 493 e-139
Alignment gi|NP_001074868.2| serine protease 33 precursor [Mus musculus]. 263 2e-70
Alignment gi|NP_081496.2| protease, serine, 32 [Mus musculus]. 256 2e-68
Alignment gi|NP_780649.1| serine protease 27 precursor [Mus musculus]. 250 1e-66
Alignment gi|NP_001074843.2| polyserase-2 [Mus musculus]. 229 3e-60
Alignment gi|NP_598492.2| brain-specific serine protease 4 [Mus musculus]. 227 1e-59
Alignment gi|NP_036164.2| tryptase gamma precursor [Mus musculus]. 226 2e-59
Alignment gi|NP_038949.2| serine protease 30 precursor [Mus musculus]. 225 5e-59
Alignment gi|NP_065233.2| testisin precursor [Mus musculus]. 215 5e-56
Alignment gi|NP_001001650.1| serine protease 48 precursor [Mus musculus]. 214 1e-55
>ref|NP_579929.1| prostasin [Mus musculus].
Length = 339
Score = 493 bits (1269), Expect = e-139
Identities = 238/319 (74%), Positives = 265/319 (83%)
Frame = +1
Query: 247 MAQREGLGPRGLAAVATLISLGLFQNGMGAKGDAVSCGIVPQAQGRITGGSNSDPGQWPW 426
MA R GLG L AV L+ LGL Q+G+ A G SCG V Q RITGG ++ PGQWPW
Sbjct: 1 MALRVGLGLGQLEAVTILLLLGLLQSGIRADGTEASCGAV--IQPRITGGGSAKPGQWPW 58
Query: 427 QVSINYNGEHVCGGSLVSDQWVLSAAHCFPRDHSTSAYEVKLGAHQLDSFSSSMTVRTVA 606
QVSI Y+G HVCGGSLVS++WV+SAAHCFPR+HS AYEVKLGAHQLDS+S+ V TVA
Sbjct: 59 QVSITYDGNHVCGGSLVSNKWVVSAAHCFPREHSREAYEVKLGAHQLDSYSNDTVVHTVA 118
Query: 607 QVISHPSYLQEGSQGDIALLQLSSPVTFSRYIWPICLPAANASFPNGLQCTVTGWGHVAP 786
Q+I+H SY +EGSQGDIAL++LSSPVTFSRYI PICLPAANASFPNGL CTVTGWGHVAP
Sbjct: 119 QIITHSSYREEGSQGDIALIRLSSPVTFSRYIRPICLPAANASFPNGLHCTVTGWGHVAP 178
Query: 787 SVSLQRPRTLQQLEVPLISRETCNCLYNIDANPDEPHFIQQDMLCAGYVKGGKDACQGDS 966
SVSLQ PR LQQLEVPLISRETC+CLYNI+A P+EPH IQQDMLCAGYVKGGKDACQGDS
Sbjct: 179 SVSLQTPRPLQQLEVPLISRETCSCLYNINAVPEEPHTIQQDMLCAGYVKGGKDACQGDS 238
Query: 967 GGPLSCPAGGHWYLAGIVSWGDACGAPNRPGVYTLTSTYASWIQHNVAELQPQVGTHIGE 1146
GGPLSCP G WYLAGIVSWGDACGAPNRPGVYTLTSTYASWI H+VAELQP+V E
Sbjct: 239 GGPLSCPMEGIWYLAGIVSWGDACGAPNRPGVYTLTSTYASWIHHHVAELQPRVVPQTQE 298
Query: 1147 SEPDSDLCSNYGALHAAPA 1203
S+PD LC+++ +A A
Sbjct: 299 SQPDGHLCNHHPVFSSAAA 317
>ref|NP_001074868.2| serine protease 33 precursor [Mus musculus].
Length = 277
Score = 263 bits (673), Expect = 2e-70
Identities = 126/253 (49%), Positives = 161/253 (63%), Gaps = 1/253 (0%)
Frame = +1
Query: 343 DAVSCGIVPQAQGRITGGSNSDPGQWPWQVSINYNGEHVCGGSLVSDQWVLSAAHCFPRD 522
+ +CG P+ RI GG ++ G+WPWQ SI + G HVCGGSL++ QWVL+A HCFPR
Sbjct: 21 ECAACG-QPRMSSRIVGGRDAQDGEWPWQTSIQHRGAHVCGGSLIAPQWVLTAGHCFPRR 79
Query: 523 HSTSAYEVKLGAHQLDSFSSSMTVRTVAQVISHPSYLQEGSQGDIALLQLSSPVTFSRYI 702
S Y V LGA LD SS + V +V+ P Y ++ ++GD+ALLQL PV+ S I
Sbjct: 80 VWPSEYSVLLGALSLDVRSSHELLVPVLRVLLPPDYSEDEARGDLALLQLRHPVSLSTRI 139
Query: 703 WPICLPAANASFPNGLQCTVTGWGHVAPSVSLQRPRTLQQLEVPLISRETCNCLYNIDAN 882
P+CLPA + P G C VTGWG ++P V L + R LQ + VPL+ C+ LY++ AN
Sbjct: 140 QPVCLPAPGSHPPPGSPCWVTGWGSLSPGVPLPKGRPLQGVRVPLLDSRACDRLYHVGAN 199
Query: 883 -PDEPHFIQQDMLCAGYVKGGKDACQGDSGGPLSCPAGGHWYLAGIVSWGDACGAPNRPG 1059
P + LCAGY +G KDACQGDSGGPL+C GHW L G+VSWG C PNRPG
Sbjct: 200 VPQGERIVLPGNLCAGYRRGHKDACQGDSGGPLTCMESGHWVLVGVVSWGKGCALPNRPG 259
Query: 1060 VYTLTSTYASWIQ 1098
VYT + Y+ WIQ
Sbjct: 260 VYTNVAKYSPWIQ 272
>ref|NP_081496.2| protease, serine, 32 [Mus musculus].
Length = 334
Score = 256 bits (655), Expect = 2e-68
Identities = 126/254 (49%), Positives = 159/254 (62%), Gaps = 4/254 (1%)
Frame = +1
Query: 367 PQAQGRITGGSNSDPGQWPWQVSINYNGEHVCGGSLVSDQWVLSAAHCFPRDHSTSAYEV 546
P+ GRI G ++ G+WPWQVS+ NG HVCGGSL+++ WVL+AAHCF + S S Y V
Sbjct: 48 PRTSGRIVSGQDAQLGRWPWQVSVRENGAHVCGGSLIAEDWVLTAAHCFNQGQSLSIYTV 107
Query: 547 KLGAHQLDSF---SSSMTVRTVAQVISHPSY-LQEGSQGDIALLQLSSPVTFSRYIWPIC 714
LG + S+ + +R VAQ I HPSY E S GDIAL+QL+SP++F+ Y+ P+C
Sbjct: 108 LLGT--ISSYPEDNEPKELRAVAQFIKHPSYSADEHSSGDIALVQLASPISFNDYMLPVC 165
Query: 715 LPAANASFPNGLQCTVTGWGHVAPSVSLQRPRTLQQLEVPLISRETCNCLYNIDANPDEP 894
LP G C VTGWGH+ + L P TLQ+L+VPLI ETCN Y ++ P
Sbjct: 166 LPKPGDPLDPGTMCWVTGWGHIGTNQPLPPPFTLQELQVPLIDAETCNTYYQENSIPGTE 225
Query: 895 HFIQQDMLCAGYVKGGKDACQGDSGGPLSCPAGGHWYLAGIVSWGDACGAPNRPGVYTLT 1074
I + MLCAG+ +G KDAC GDSGGPL C W AG+VSWG C RPGVYT
Sbjct: 226 PVILEGMLCAGFQEGKKDACNGDSGGPLVCDINDVWIQAGVVSWGSDCALFKRPGVYTNV 285
Query: 1075 STYASWIQHNVAEL 1116
S Y SWIQ+ + L
Sbjct: 286 SVYISWIQNTMWNL 299
>ref|NP_780649.1| serine protease 27 precursor [Mus musculus].
Length = 328
Score = 250 bits (639), Expect = 1e-66
Identities = 129/293 (44%), Positives = 169/293 (57%), Gaps = 2/293 (0%)
Frame = +1
Query: 289 VATLISLGLF-QNGMGAKGDAVSCGIVPQAQGRITGGSNSDPGQWPWQVSINYNGEHVCG 465
+A L+ L L ++G +CG P+ R+ GG N+ G+WPWQVSI NG H CG
Sbjct: 6 IAALLLLPLLLRSGTEGARTLRACGH-PKMFNRMVGGENALEGEWPWQVSIQRNGIHFCG 64
Query: 466 GSLVSDQWVLSAAHCFPRDHSTSAYEVKLGAHQLDSFSSSMTVRTVAQVISHPSYLQEGS 645
GSL++ WVL+AAHCF S Y+V LGA +L V QV S+P Y S
Sbjct: 65 GSLIAPTWVLTAAHCFSNTSDISIYQVLLGALKLQQPGPHALYVPVKQVKSNPQYQGMAS 124
Query: 646 QGDIALLQLSSPVTFSRYIWPICLPAANASFPNGLQCTVTGWGHVAPSVSLQRPRTLQQL 825
D+AL++L PVTF+ YI P+CLP + F +G+ C VTGWG + L PR LQ+L
Sbjct: 125 SADVALVELQGPVTFTNYILPVCLPDPSVIFESGMNCWVTGWGSPSEQDRLPNPRVLQKL 184
Query: 826 EVPLISRETCNCLYNIDANPD-EPHFIQQDMLCAGYVKGGKDACQGDSGGPLSCPAGGHW 1002
VP+I CN LYN D D + I+ DMLCAG+ +G KDAC+GDSGGPL C W
Sbjct: 185 AVPIIDTPKCNLLYNKDVESDFQLKTIKDDMLCAGFAEGKKDACKGDSGGPLVCLVDQSW 244
Query: 1003 YLAGIVSWGDACGAPNRPGVYTLTSTYASWIQHNVAELQPQVGTHIGESEPDS 1161
AG++SWG+ C NRPGVY +++ WI + ELQ Q + + DS
Sbjct: 245 VQAGVISWGEGCARRNRPGVYIRVTSHHKWIHQIIPELQFQGRAGTQQQQKDS 297
>ref|NP_001074843.2| polyserase-2 [Mus musculus].
Length = 863
Score = 229 bits (584), Expect = 3e-60
Identities = 118/285 (41%), Positives = 164/285 (57%), Gaps = 7/285 (2%)
Frame = +1
Query: 289 VATLISLGLFQNGMGA----KGDAVSCGIVPQAQGRITGGSNSDPGQWPWQVSINYNGEH 456
V + I G FQ+ + + + + + CG P+ RI GGS++ PG WPWQVS++ G H
Sbjct: 13 VVSPIPPGAFQDSVVSPTQGEFEDLDCGR-PEPSSRIVGGSDAHPGTWPWQVSLHQGGGH 71
Query: 457 VCGGSLVSDQWVLSAAHCFPRDHSTSAYE---VKLGAHQLDSFSSSMTVRTVAQVISHPS 627
+CGGSL++ WVLSAAHCF + + + V LG H D +R+VA ++ +
Sbjct: 72 ICGGSLIAPSWVLSAAHCFVTNGTLEPADELSVLLGVHSQDGPLEGAHMRSVATILIPDN 131
Query: 628 YLQEGSQGDIALLQLSSPVTFSRYIWPICLPAANASFPNGLQCTVTGWGHVAPSVSLQRP 807
Y D+ALL+L+SP + P+CLP A+ F +G C TGWG V +V L P
Sbjct: 132 YSTVELGADLALLRLASPAKLGPSVRPVCLPRASHLFAHGTACWATGWGDVQEAVPLPLP 191
Query: 808 RTLQQLEVPLISRETCNCLYNIDANPDEPHFIQQDMLCAGYVKGGKDACQGDSGGPLSCP 987
LQ++E+ L+ C CLY+ + + MLCAGY G +D CQGDSGGPL C
Sbjct: 192 WVLQEVELRLLGEAACQCLYSRPGPFNLTFQLLPGMLCAGYPAGRRDTCQGDSGGPLVCE 251
Query: 988 AGGHWYLAGIVSWGDACGAPNRPGVYTLTSTYASWIQHNVAELQP 1122
GG W+LAGI S+G CG NRPGV+T + Y SWI+ +V +P
Sbjct: 252 DGGRWFLAGITSFGFGCGRRNRPGVFTAVAPYESWIREHVMGSEP 296
Score = 105 bits (263), Expect = 6e-23
Identities = 77/251 (30%), Positives = 113/251 (45%), Gaps = 15/251 (5%)
Frame = +1
Query: 394 GSNSDPGQWPWQVSINYNGEHVCGGSLVSDQWVLSAAHCF-------PRDHSTSAYEVKL 552
G PG WPW+ + G C G+LVSD+WVL+ A CF PR +S ++ +
Sbjct: 327 GKAPRPGTWPWEAQVTVPGSTPCYGALVSDRWVLAPASCFLDFPTQQPRTSDSSPHDFET 386
Query: 553 GAHQLDSFSSSMTVRTVAQVISHPSYLQEGSQGDIALLQLSSPVTFSRYIWPICLPAANA 732
L S VA++++H + ++ + D+ALLQL + V + +CLP
Sbjct: 387 WRVLLPSRPEE---ERVARLVAHENASRDFA-SDLALLQLRTRVNLTAAPSAVCLPHHEH 442
Query: 733 SFPNGLQCTVTGW--GHVAPSVSLQRPRTLQQLEVPLISRETCNCLY-----NIDANPDE 891
F G C + W G +AP S QLE L++ C+CLY + D
Sbjct: 443 YFLPGSHCRLARWGRGELAPGSS-------AQLEAQLLNGWWCHCLYGRQGETVPRPGDP 495
Query: 892 PHFIQQDMLCAGYVKGGK-DACQGDSGGPLSCPAGGHWYLAGIVSWGDACGAPNRPGVYT 1068
PH +LC Y + + C DS L C G W+LAG + D C RP ++
Sbjct: 496 PH-----LLCPAYQEEEEAGLCWKDSSWSLLCREEGTWFLAGYRTLSDGC---LRPRAFS 547
Query: 1069 LTSTYASWIQH 1101
T+ WI+H
Sbjct: 548 PMQTHGPWIRH 558
Score = 95.9 bits (237), Expect = 6e-20
Identities = 80/258 (31%), Positives = 108/258 (41%), Gaps = 7/258 (2%)
Frame = +1
Query: 418 WPWQVSINYNGEHVCGGSLVSDQWVLSAAHCFPRDHSTSA--YEVKLGAHQLDSFSSSMT 591
WPW ++ G+ VC G LV+ WVL+A HC R ST+ EV LG + S
Sbjct: 607 WPWLTEVHVTGDRVCTGILVAPGWVLAATHCILRLGSTTVPYIEVYLGRAGVSSLPQGHQ 666
Query: 592 VRTVAQVISHPSYLQEGSQGDIALLQLSSPVTFSRYIWPICLPAANASFPNGLQCTVTGW 771
V I P +L G + +ALL+L+S V S PICL P+G C V GW
Sbjct: 667 VSRSVVSIRLPRHL--GLRPPLALLELNSRVEPSPSALPICLHP--GGIPSGASCWVLGW 722
Query: 772 GHVAPSVSLQRPRTLQQLEVPLISRETCNCLYNIDANPDEPHFIQQDMLCAGYVKGGKDA 951
+ + R V +++ C+CLY P + C Y +G +D
Sbjct: 723 KN-------PQDRVPVVAAVSILTPRLCHCLY--------PGILTPGTFCVLYSEGQEDR 767
Query: 952 CQGDSGGPLSCPA-GGHWYLAGIVSWGDACGAPNRPGVYTLTSTYASWIQHNVAELQPQV 1128
C+ S PL C G W L G+ G NR ++ A+WI V E
Sbjct: 768 CEVTSAPPLLCQTEEGPWVLVGMAVRG------NRE-LFAAIGPEATWISQTVGEAH--- 817
Query: 1129 GTHIGESE----PDSDLC 1170
H+G S SDLC
Sbjct: 818 FLHLGGSSYWSPEGSDLC 835
>ref|NP_598492.2| brain-specific serine protease 4 [Mus musculus].
Length = 307
Score = 227 bits (579), Expect = 1e-59
Identities = 117/257 (45%), Positives = 152/257 (59%), Gaps = 2/257 (0%)
Frame = +1
Query: 355 CGIVPQAQGRITGGSNSDPGQWPWQVSINYNGEHVCGGSLVSDQWVLSAAHCFPRD-HST 531
CG PQ RI GG +S QWPW VSI NG H C GSL++++WV++AAHCF +
Sbjct: 41 CG-KPQQLNRIVGGEDSMDAQWPWIVSILKNGSHHCAGSLLTNRWVVTAAHCFKSNMDKP 99
Query: 532 SAYEVKLGAHQLDSFSSSMTVRTVAQVISHPSYL-QEGSQGDIALLQLSSPVTFSRYIWP 708
S + V LGA +L S +A V+ HP Y +EG+ DIAL++L + FS I P
Sbjct: 100 SLFSVLLGAWKLGSPGPRSQKVGIAWVLPHPRYSWKEGTHADIALVRLEHSIQFSERILP 159
Query: 709 ICLPAANASFPNGLQCTVTGWGHVAPSVSLQRPRTLQQLEVPLISRETCNCLYNIDANPD 888
ICLP ++ P C + GWG + V L P+TLQ+L+VP+I E C LY A +
Sbjct: 160 ICLPDSSVRLPPKTDCWIAGWGSIQDGVPLPHPQTLQKLKVPIIDSELCKSLYWRGAGQE 219
Query: 889 EPHFIQQDMLCAGYVKGGKDACQGDSGGPLSCPAGGHWYLAGIVSWGDACGAPNRPGVYT 1068
I + MLCAGY++G +DAC GDSGGPL C HW L GI+SWG+ C NRPGVYT
Sbjct: 220 A---ITEGMLCAGYLEGERDACLGDSGGPLMCQVDDHWLLTGIISWGEGCAERNRPGVYT 276
Query: 1069 LTSTYASWIQHNVAELQ 1119
+ SW+Q V +Q
Sbjct: 277 SLLAHRSWVQRIVQGVQ 293
>ref|NP_036164.2| tryptase gamma precursor [Mus musculus].
Length = 311
Score = 226 bits (577), Expect = 2e-59
Identities = 113/250 (45%), Positives = 147/250 (58%)
Frame = +1
Query: 364 VPQAQGRITGGSNSDPGQWPWQVSINYNGEHVCGGSLVSDQWVLSAAHCFPRDHSTSAYE 543
V + RI GG + G WPWQ S+ + HVCGGSL+S +WVL+AAHCF ++S Y+
Sbjct: 23 VSNSGSRIVGGHAAPAGTWPWQASLRLHKVHVCGGSLLSPEWVLTAAHCFSGSVNSSDYQ 82
Query: 544 VKLGAHQLDSFSSSMTVRTVAQVISHPSYLQEGSQGDIALLQLSSPVTFSRYIWPICLPA 723
V LG + TV+ + P GS GDIAL+QLSSPV S + P+CLP
Sbjct: 83 VHLGELTVTLSPHFSTVKRIIMYTGSPG--PPGSSGDIALVQLSSPVALSSQVQPVCLPE 140
Query: 724 ANASFPNGLQCTVTGWGHVAPSVSLQRPRTLQQLEVPLISRETCNCLYNIDANPDEPHFI 903
A+A F G+QC VTGWG+ L+ P LQ+ +V ++ +TC+ YN I
Sbjct: 141 ASADFYPGMQCWVTGWGYTGEGEPLKPPYNLQEAKVSVVDVKTCSQAYN----SPNGSLI 196
Query: 904 QQDMLCAGYVKGGKDACQGDSGGPLSCPAGGHWYLAGIVSWGDACGAPNRPGVYTLTSTY 1083
Q DMLCA +G DACQ DSGGPL C G W AG+VSWG+ CG P+RPGVY + Y
Sbjct: 197 QPDMLCA---RGPGDACQDDSGGPLVCQVAGTWQQAGVVSWGEGCGRPDRPGVYARVTAY 253
Query: 1084 ASWIQHNVAE 1113
+WI H++ E
Sbjct: 254 VNWIHHHIPE 263
>ref|NP_038949.2| serine protease 30 precursor [Mus musculus].
Length = 310
Score = 225 bits (574), Expect = 5e-59
Identities = 126/279 (45%), Positives = 158/279 (56%), Gaps = 5/279 (1%)
Frame = +1
Query: 292 ATLISLGLFQNGMGAKGDAVS--CGIVPQAQGRITGGSNSDPGQWPWQVSINYNGE-HVC 462
A I L L Q A+GD + CG A G+I GG ++ GQWPWQVS+ + H+C
Sbjct: 5 ARCIFLLLLQILTRARGDILPSVCGHSRDA-GKIVGGQDALEGQWPWQVSLWITEDGHIC 63
Query: 463 GGSLVSDQWVLSAAHCFPRDHSTSAYEVKLGAHQLDSFSSSMTVRTVAQVISHPSYL-QE 639
GGSL+ + WVL+AAHCF R + S Y VK+G L T+ V + HP+YL +
Sbjct: 64 GGSLIHEVWVLTAAHCFRRSLNPSFYHVKVGGLTLSLLEPHSTLVAVRNIFVHPTYLWAD 123
Query: 640 GSQGDIALLQLSSPVTFSRYIWPICLPAANASFPNGLQCTVTGWGHVAPSVSLQRPRTLQ 819
S GDIAL+QL +P+ S++ P+CLPAA G C VTGWG + LQ
Sbjct: 124 ASSGDIALVQLDTPLRPSQFT-PVCLPAAQTPLTPGTVCWVTGWG---ATQERDMASVLQ 179
Query: 820 QLEVPLISRETCNCLYNIDANP-DEPHFIQQDMLCAGYVKGGKDACQGDSGGPLSCPAGG 996
+L VPL+ E C +Y+ + IQ DMLCAGYV+G KD+CQGDSGGPL C
Sbjct: 180 ELAVPLLDSEDCEKMYHTQGSSLSGERIIQSDMLCAGYVEGQKDSCQGDSGGPLVCSINS 239
Query: 997 HWYLAGIVSWGDACGAPNRPGVYTLTSTYASWIQHNVAE 1113
W GI SWG C P RPGVYT TY WIQ +AE
Sbjct: 240 SWTQVGITSWGIGCARPYRPGVYTRVPTYVDWIQRILAE 278
>ref|NP_065233.2| testisin precursor [Mus musculus].
Length = 324
Score = 215 bits (548), Expect = 5e-56
Identities = 110/245 (44%), Positives = 148/245 (60%), Gaps = 6/245 (2%)
Frame = +1
Query: 382 RITGGSNSDPGQWPWQVSINYNGEHVCGGSLVSDQWVLSAAHCFPRDHSTSAYEVKLGAH 561
RI GG +++ G+WPWQ S+ G H+CG +L++ +WVL+AAHCF +D+ + V+ G
Sbjct: 54 RIVGGDDAELGRWPWQGSLRVWGNHLCGATLLNRRWVLTAAHCFQKDNDPFDWTVQFG-- 111
Query: 562 QLDSFSSSMTVRT------VAQVISHPSYLQEGSQGDIALLQLSSPVTFSRYIWPICLPA 723
+L S S ++ + + P Y E DIALL+LSSPVT++ +I PICL
Sbjct: 112 ELTSRPSLWNLQAYSNRYQIEDIFLSPKY-SEQYPNDIALLKLSSPVTYNNFIQPICLLN 170
Query: 724 ANASFPNGLQCTVTGWGHVAPSVSLQRPRTLQQLEVPLISRETCNCLYNIDANPDEPHFI 903
+ F N C VTGWG + SL P TLQ+++V +I+ CN +Y PD I
Sbjct: 171 STYKFENRTDCWVTGWGAIGEDESLPSPNTLQEVQVAIINNSMCNHMYK---KPDFRTNI 227
Query: 904 QQDMLCAGYVKGGKDACQGDSGGPLSCPAGGHWYLAGIVSWGDACGAPNRPGVYTLTSTY 1083
DM+CAG +GGKDAC GDSGGPL+C WY G+VSWG CG PNRPGVYT S +
Sbjct: 228 WGDMVCAGTPEGGKDACFGDSGGPLACDQDTVWYQVGVVSWGIGCGRPNRPGVYTNISHH 287
Query: 1084 ASWIQ 1098
+WIQ
Sbjct: 288 YNWIQ 292
>ref|NP_001001650.1| serine protease 48 precursor [Mus musculus].
Length = 312
Score = 214 bits (545), Expect = 1e-55
Identities = 128/291 (43%), Positives = 161/291 (55%), Gaps = 2/291 (0%)
Frame = +1
Query: 265 LGPRGLAAVATLISLGLFQNGMGAKGDAVSCGIVPQAQGRITGGSNSDPGQWPWQVSINY 444
+GP GL V L+ LG FQ K + S P GRI GG ++ G+WPWQVS+ +
Sbjct: 1 MGPAGLK-VLLLLFLGAFQGSFTKKKNLQSVCGRPVHTGRIVGGQDAALGRWPWQVSLRF 59
Query: 445 NGEHVCGGSLVSDQWVLSAAHCFPRDHSTSAYEVKLGAHQLDSFSSSMTVRTVAQVISHP 624
+ H CGGSL+SD WVL+AAHC + + Y V LG+ +D SS I+ P
Sbjct: 60 DYTHSCGGSLISDHWVLTAAHCIKKTWYSFLYSVWLGS--IDREYSSTGKEYYVSRIAIP 117
Query: 625 SYLQEGSQGDIALLQLSSPVTFSRYIWPICLPAANASFPNGLQCTVTGWGHVAPSVSLQR 804
++ DIALL+LSS VTFS I PICLP + C VTGWG +
Sbjct: 118 D-KHRHTEADIALLKLSSRVTFSSVILPICLPNISKQLTVPASCWVTGWGQ---NQEGHY 173
Query: 805 PRTLQQLEVPLISRETCNCLYNIDA--NPDEPHFIQQDMLCAGYVKGGKDACQGDSGGPL 978
P TLQ+LEVP+IS E C LYN PD I++DM CAG + KD+C+GDSGGPL
Sbjct: 174 PSTLQELEVPVISSEACEQLYNPIGVFLPDLERVIKEDMFCAGERQSRKDSCKGDSGGPL 233
Query: 979 SCPAGGHWYLAGIVSWGDACGAPNRPGVYTLTSTYASWIQHNVAELQPQVG 1131
SC G W L G+VSWG CG + PGVYT + Y WI ++ P G
Sbjct: 234 SCHIDGVWRLMGVVSWGLECG-KDLPGVYTNVTYYQKWISAIISRAPPGWG 283
Database: RefSeq49_MP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 15,617,559
Number of sequences in database: 30,036
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 30036
Number of Hits to DB: 43,891,688
Number of extensions: 1252388
Number of successful extensions: 6330
Number of sequences better than 1.0e-05: 174
Number of HSP's gapped: 5742
Number of HSP's successfully gapped: 179
Length of query: 423
Length of database: 15,617,559
Length adjustment: 104
Effective length of query: 319
Effective length of database: 12,493,815
Effective search space: 3985526985
Effective search space used: 3985526985
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to RefSeqHP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-013283
(1270 letters)
Database: RefSeq49_HP.fasta
32,964 sequences; 18,297,164 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_002764.1| prostasin preproprotein [Homo sapiens]. 491 e-139
Alignment gi|NP_690851.2| serine protease 33 precursor [Homo sapiens]. 267 2e-71
Alignment gi|NP_114154.1| serine protease 27 precursor [Homo sapiens]. 254 1e-67
Alignment gi|NP_775773.2| polyserase-2 precursor [Homo sapiens]. 241 1e-63
Alignment gi|NP_071402.1| brain-specific serine protease 4 precursor [Hom... 228 1e-59
Alignment gi|NP_036599.3| tryptase gamma preproprotein [Homo sapiens]. 224 2e-58
Alignment gi|NP_659205.1| testisin isoform 2 [Homo sapiens]. 214 1e-55
Alignment gi|NP_705837.1| transmembrane protease serine 6 [Homo sapiens]. 211 1e-54
Alignment gi|NP_006790.1| testisin isoform 1 [Homo sapiens]. 209 4e-54
Alignment gi|NP_002763.2| enteropeptidase precursor [Homo sapiens]. 207 2e-53
>ref|NP_002764.1| prostasin preproprotein [Homo sapiens].
Length = 343
Score = 491 bits (1263), Expect = e-139
Identities = 234/319 (73%), Positives = 261/319 (81%)
Frame = +1
Query: 247 MAQREGLGPRGLAAVATLISLGLFQNGMGAKGDAVSCGIVPQAQGRITGGSNSDPGQWPW 426
MAQ+ LGP L AVA L+ LGL ++G GA+G CG+ PQA RITGGS++ GQWPW
Sbjct: 1 MAQKGVLGPGQLGAVAILLYLGLLRSGTGAEGAEAPCGVAPQA--RITGGSSAVAGQWPW 58
Query: 427 QVSINYNGEHVCGGSLVSDQWVLSAAHCFPRDHSTSAYEVKLGAHQLDSFSSSMTVRTVA 606
QVSI Y G HVCGGSLVS+QWVLSAAHCFP +H AYEVKLGAHQLDS+S V T+
Sbjct: 59 QVSITYEGVHVCGGSLVSEQWVLSAAHCFPSEHHKEAYEVKLGAHQLDSYSEDAKVSTLK 118
Query: 607 QVISHPSYLQEGSQGDIALLQLSSPVTFSRYIWPICLPAANASFPNGLQCTVTGWGHVAP 786
+I HPSYLQEGSQGDIALLQLS P+TFSRYI PICLPAANASFPNGL CTVTGWGHVAP
Sbjct: 119 DIIPHPSYLQEGSQGDIALLQLSRPITFSRYIRPICLPAANASFPNGLHCTVTGWGHVAP 178
Query: 787 SVSLQRPRTLQQLEVPLISRETCNCLYNIDANPDEPHFIQQDMLCAGYVKGGKDACQGDS 966
SVSL P+ LQQLEVPLISRETCNCLYNIDA P+EPHF+Q+DM+CAGYV+GGKDACQGDS
Sbjct: 179 SVSLLTPKPLQQLEVPLISRETCNCLYNIDAKPEEPHFVQEDMVCAGYVEGGKDACQGDS 238
Query: 967 GGPLSCPAGGHWYLAGIVSWGDACGAPNRPGVYTLTSTYASWIQHNVAELQPQVGTHIGE 1146
GGPLSCP G WYL GIVSWGDACGA NRPGVYTL S+YASWIQ V ELQP+V E
Sbjct: 239 GGPLSCPVEGLWYLTGIVSWGDACGARNRPGVYTLASSYASWIQSKVTELQPRVVPQTQE 298
Query: 1147 SEPDSDLCSNYGALHAAPA 1203
S+PDS+LC ++ A +APA
Sbjct: 299 SQPDSNLCGSHLAFSSAPA 317
>ref|NP_690851.2| serine protease 33 precursor [Homo sapiens].
Length = 280
Score = 267 bits (682), Expect = 2e-71
Identities = 133/280 (47%), Positives = 172/280 (61%), Gaps = 1/280 (0%)
Frame = +1
Query: 274 RGLAAVATLISLGLFQNGMGAKGDAVSCGIVPQAQGRITGGSNSDPGQWPWQVSINYNGE 453
RG++ + L+ L L G + A +CG P+ RI GG + G+WPWQ SI + G
Sbjct: 2 RGVSCLQVLLLLVLGAAGTQGRKSA-ACG-QPRMSSRIVGGRDGRDGEWPWQASIQHRGA 59
Query: 454 HVCGGSLVSDQWVLSAAHCFPRDHSTSAYEVKLGAHQLDSFSSSMTVRTVAQVISHPSYL 633
HVCGGSL++ QWVL+AAHCFPR + Y V+LGA +L S S V +V+ P Y
Sbjct: 60 HVCGGSLIAPQWVLTAAHCFPRRALPAEYRVRLGALRLGSTSPRTLSVPVRRVLLPPDYS 119
Query: 634 QEGSQGDIALLQLSSPVTFSRYIWPICLPAANASFPNGLQCTVTGWGHVAPSVSLQRPRT 813
++G++GD+ALLQL PV S + P+CLP A P G C VTGWG + P V L R
Sbjct: 120 EDGARGDLALLQLRRPVPLSARVQPVCLPVPGARPPPGTPCRVTGWGSLRPGVPLPEWRP 179
Query: 814 LQQLEVPLISRETCNCLYNIDAN-PDEPHFIQQDMLCAGYVKGGKDACQGDSGGPLSCPA 990
LQ + VPL+ TC+ LY++ A+ P + LCAGY +G KDACQGDSGGPL+C
Sbjct: 180 LQGVRVPLLDSRTCDGLYHVGADVPQAERIVLPGSLCAGYPQGHKDACQGDSGGPLTCLQ 239
Query: 991 GGHWYLAGIVSWGDACGAPNRPGVYTLTSTYASWIQHNVA 1110
G W L G+VSWG C PNRPGVYT +TY+ WIQ V+
Sbjct: 240 SGSWVLVGVVSWGKGCALPNRPGVYTSVATYSPWIQARVS 279
>ref|NP_114154.1| serine protease 27 precursor [Homo sapiens].
Length = 290
Score = 254 bits (649), Expect = 1e-67
Identities = 123/261 (47%), Positives = 160/261 (61%), Gaps = 1/261 (0%)
Frame = +1
Query: 346 AVSCGIVPQAQGRITGGSNSDPGQWPWQVSINYNGEHVCGGSLVSDQWVLSAAHCFPRDH 525
A +CG P+ R+ GG ++ G+WPWQVSI NG H CGGSL+++QWVL+AAHCF
Sbjct: 23 ATACGR-PRMLNRMVGGQDTQEGEWPWQVSIQRNGSHFCGGSLIAEQWVLTAAHCFRNTS 81
Query: 526 STSAYEVKLGAHQLDSFSSSMTVRTVAQVISHPSYLQEGSQGDIALLQLSSPVTFSRYIW 705
TS Y+V LGA QL V QV S+P Y S D+AL++L +PV F+ YI
Sbjct: 82 ETSLYQVLLGARQLVQPGPHAMYARVRQVESNPLYQGTASSADVALVELEAPVPFTNYIL 141
Query: 706 PICLPAANASFPNGLQCTVTGWGHVAPSVSLQRPRTLQQLEVPLISRETCNCLYNIDAN- 882
P+CLP + F G+ C VTGWG + L PR LQ+L VP+I CN LY+ D
Sbjct: 142 PVCLPDPSVIFETGMNCWVTGWGSPSEEDLLPEPRILQKLAVPIIDTPKCNLLYSKDTEF 201
Query: 883 PDEPHFIQQDMLCAGYVKGGKDACQGDSGGPLSCPAGGHWYLAGIVSWGDACGAPNRPGV 1062
+P I+ DMLCAG+ +G KDAC+GDSGGPL C G W AG++SWG+ C NRPGV
Sbjct: 202 GYQPKTIKNDMLCAGFEEGKKDACKGDSGGPLVCLVGQSWLQAGVISWGEGCARQNRPGV 261
Query: 1063 YTLTSTYASWIQHNVAELQPQ 1125
Y + + +WI + +LQ Q
Sbjct: 262 YIRVTAHHNWIHRIIPKLQFQ 282
>ref|NP_775773.2| polyserase-2 precursor [Homo sapiens].
Length = 855
Score = 241 bits (614), Expect = 1e-63
Identities = 116/261 (44%), Positives = 156/261 (59%), Gaps = 3/261 (1%)
Frame = +1
Query: 349 VSCGIVPQAQGRITGGSNSDPGQWPWQVSINYNGEHVCGGSLVSDQWVLSAAHCFPRDHS 528
+ CG P+ RI GGSN+ PG WPWQVS+++ G H+CGGSL++ WVLSAAHCF + +
Sbjct: 36 LDCGR-PEPSARIVGGSNAQPGTWPWQVSLHHGGGHICGGSLIAPSWVLSAAHCFMTNGT 94
Query: 529 ---TSAYEVKLGAHQLDSFSSSMTVRTVAQVISHPSYLQEGSQGDIALLQLSSPVTFSRY 699
+ + V LG H D R VA ++ +Y Q D+ALL+L+SP +
Sbjct: 95 LEPAAEWSVLLGVHSQDGPLDGAHTRAVAAIVVPANYSQVELGADLALLRLASPASLGPA 154
Query: 700 IWPICLPAANASFPNGLQCTVTGWGHVAPSVSLQRPRTLQQLEVPLISRETCNCLYNIDA 879
+WP+CLP A+ F +G C TGWG V + L P LQ++E+ L+ TC CLY+
Sbjct: 155 VWPVCLPRASHRFVHGTACWATGWGDVQEADPLPLPWVLQEVELRLLGEATCQCLYSQPG 214
Query: 880 NPDEPHFIQQDMLCAGYVKGGKDACQGDSGGPLSCPAGGHWYLAGIVSWGDACGAPNRPG 1059
+ I MLCAGY +G +D CQGDSGGPL C GG W+ AGI S+G CG NRPG
Sbjct: 215 PFNLTLQILPGMLCAGYPEGRRDTCQGDSGGPLVCEEGGRWFQAGITSFGFGCGRRNRPG 274
Query: 1060 VYTLTSTYASWIQHNVAELQP 1122
V+T +TY +WI+ V +P
Sbjct: 275 VFTAVATYEAWIREQVMGSEP 295
Score = 113 bits (282), Expect = 4e-25
Identities = 90/286 (31%), Positives = 127/286 (44%), Gaps = 17/286 (5%)
Frame = +1
Query: 394 GSNSDPGQWPWQVSINYNGEHVCGGSLVSDQWVLSAAHCFPRDHSTSAYEVKLGAHQLDS 573
G PG WPW+ + G C G+LVS+ WVL+ A CF +S+ + L A ++
Sbjct: 326 GKAPRPGAWPWEAQVMVPGSRPCHGALVSESWVLAPASCFLDPNSSDSPPRDLDAWRV-L 384
Query: 574 FSSSMTVRTVAQVISHPSYLQEGSQGDIALLQLSSPVTFSRYIWPICLPAANASFPNGLQ 753
S VA+++ H + + + D+ALLQL +PV S P+CLP F G +
Sbjct: 385 LPSRPRAERVARLVQHENASWDNA-SDLALLQLRTPVNLSAASRPVCLPHPEHYFLPGSR 443
Query: 754 CTVTGWGHVAPSVSLQRPRTLQQLEVPLISRETCNCLYN-----IDANPDEPHFIQQDML 918
C + WG P++ P L LE L+ C+CLY + D PH L
Sbjct: 444 CRLARWGRGEPALG---PGAL--LEAELLGGWWCHCLYGRQGAAVPLPGDPPH-----AL 493
Query: 919 CAGY-VKGGKDACQGDSGGPLSCPAGGHWYLAGIVSWGDACGAPNRPGVYTLTSTYASWI 1095
C Y K +C DS L C G W+LAGI + C RP + T+ WI
Sbjct: 494 CPAYQEKEEVGSCWNDSRWSLLCQEEGTWFLAGIRDFPSGC---LRPRAFFPLQTHGPWI 550
Query: 1096 QH--NVAELQPQVGTHIGE--SEPDSDLC---SNYGA----LHAAP 1200
H A L+ Q+ G E ++ C + +GA L AAP
Sbjct: 551 SHVTRGAYLEDQLAWDWGPDGEETETQTCPPHTEHGACGLRLEAAP 596
Score = 91.7 bits (226), Expect = 1e-18
Identities = 70/235 (29%), Positives = 97/235 (41%), Gaps = 3/235 (1%)
Frame = +1
Query: 418 WPWQVSINYNGEHVCGGSLVSDQWVLSAAHCFPRDHSTSA--YEVKLGAHQLDSFSSSMT 591
WPW ++ G+ VC G L++ WVL+A HC R ST+ EV LG S
Sbjct: 601 WPWLAEVHVAGDRVCTGILLAPGWVLAATHCVLRPGSTTVPYIEVYLGRAGASSLPQGHQ 660
Query: 592 VRTVAQVISHPSYLQEGSQGDIALLQLSSPVTFSRYIWPICLPAANASFPNGLQCTVTGW 771
V + I P +L G + +ALL+LSS V S PICL A P G C V GW
Sbjct: 661 VSRLVISIRLPQHL--GLRPPLALLELSSRVEPSPSALPICLHP--AGIPPGASCWVLGW 716
Query: 772 GHVAPSVSLQRPRTLQQLEVPLISRETCNCLYNIDANPDEPHFIQQDMLCAGYVKGGKDA 951
+ R V ++++ C+CLY + LC Y +G ++
Sbjct: 717 KE-------PQDRVPVAAAVSILTQRICDCLYQ--------GILPPGTLCVLYAEGQENR 761
Query: 952 CQGDSGGPLSCP-AGGHWYLAGIVSWGDACGAPNRPGVYTLTSTYASWIQHNVAE 1113
C+ S PL C G W L G+ G ++ +WI V E
Sbjct: 762 CEMTSAPPLLCQMTEGSWILVGMAVQGSR-------ELFAAIGPEEAWISQTVGE 809
>ref|NP_071402.1| brain-specific serine protease 4 precursor [Homo sapiens].
Length = 317
Score = 228 bits (580), Expect = 1e-59
Identities = 119/259 (45%), Positives = 156/259 (60%), Gaps = 3/259 (1%)
Frame = +1
Query: 352 SCGIVPQAQGRITGGSNSDPGQWPWQVSINYNGEHVCGGSLVSDQWVLSAAHCFPRDHST 531
+CG PQ R+ GG +S +WPW VSI NG H C GSL++ +WV++AAHCF +D+
Sbjct: 40 ACG-KPQQLNRVVGGEDSTDSEWPWIVSIQKNGTHHCAGSLLTSRWVITAAHCF-KDNLN 97
Query: 532 SAY--EVKLGAHQLDSFSSSMTVRTVAQVISHPSYL-QEGSQGDIALLQLSSPVTFSRYI 702
Y V LGA QL + S VA V HP Y +EG+ DIAL++L + FS +
Sbjct: 98 KPYLFSVLLGAWQLGNPGSRSQKVGVAWVEPHPVYSWKEGACADIALVRLERSIQFSERV 157
Query: 703 WPICLPAANASFPNGLQCTVTGWGHVAPSVSLQRPRTLQQLEVPLISRETCNCLYNIDAN 882
PICLP A+ P C ++GWG + V L P+TLQ+L+VP+I E C+ LY A
Sbjct: 158 LPICLPDASIHLPPNTHCWISGWGSIQDGVPLPHPQTLQKLKVPIIDSEVCSHLYWRGAG 217
Query: 883 PDEPHFIQQDMLCAGYVKGGKDACQGDSGGPLSCPAGGHWYLAGIVSWGDACGAPNRPGV 1062
I +DMLCAGY++G +DAC GDSGGPL C G W LAGI+SWG+ C NRPGV
Sbjct: 218 QGP---ITEDMLCAGYLEGERDACLGDSGGPLMCQVDGAWLLAGIISWGEGCAERNRPGV 274
Query: 1063 YTLTSTYASWIQHNVAELQ 1119
Y S + SW++ V +Q
Sbjct: 275 YISLSAHRSWVEKIVQGVQ 293
>ref|NP_036599.3| tryptase gamma preproprotein [Homo sapiens].
Length = 321
Score = 224 bits (570), Expect = 2e-58
Identities = 126/284 (44%), Positives = 162/284 (57%), Gaps = 3/284 (1%)
Frame = +1
Query: 265 LGPRGLAAVATL--ISLGLFQNGMGAKGDAVSCGIVPQAQGRITGGSNSDPGQWPWQVSI 438
LG GL + + +SL Q G G V A GRI GG + G WPWQ S+
Sbjct: 3 LGACGLLLLLAVPGVSLRTLQPGCGRPQ-------VSDAGGRIVGGHAAPAGAWPWQASL 55
Query: 439 NYNGEHVCGGSLVSDQWVLSAAHCFPRDHSTSAYEVKLGAHQLDSFSSSMTVRTVAQVIS 618
HVCGGSL+S QWVL+AAHCF ++S Y+V LG ++ + S TV Q+I
Sbjct: 56 RLRRVHVCGGSLLSPQWVLTAAHCFSGSLNSSDYQVHLGELEI---TLSPHFSTVRQIIL 112
Query: 619 HPSYL-QEGSQGDIALLQLSSPVTFSRYIWPICLPAANASFPNGLQCTVTGWGHVAPSVS 795
H S Q G+ GDIAL++LS PVT S I P+CLP A+ F G++C VTGWG+
Sbjct: 113 HSSPSGQPGTSGDIALVELSVPVTLSSRILPVCLPEASDDFCPGIRCWVTGWGYTREGEP 172
Query: 796 LQRPRTLQQLEVPLISRETCNCLYNIDANPDEPHFIQQDMLCAGYVKGGKDACQGDSGGP 975
L P +L++++V ++ ETC Y +Q DMLCA +G DACQ DSGGP
Sbjct: 173 LPPPYSLREVKVSVVDTETCRRDYPGPGGS----ILQPDMLCA---RGPGDACQDDSGGP 225
Query: 976 LSCPAGGHWYLAGIVSWGDACGAPNRPGVYTLTSTYASWIQHNV 1107
L C G W AGIVSWG+ CG PNRPGVYT Y +WI+ ++
Sbjct: 226 LVCQVNGAWVQAGIVSWGEGCGRPNRPGVYTRVPAYVNWIRRHI 269
>ref|NP_659205.1| testisin isoform 2 [Homo sapiens].
Length = 312
Score = 214 bits (545), Expect = 1e-55
Identities = 119/267 (44%), Positives = 159/267 (59%), Gaps = 8/267 (2%)
Frame = +1
Query: 382 RITGGSNSDPGQWPWQVSINYNGEHVCGGSLVSDQWVLSAAHCFPRDHST-SAYEVKLGA 558
RI GG +++ G+WPWQ S+ HVCG SL+S +W L+AAHCF D S S + V+ G
Sbjct: 41 RIVGGEDAELGRWPWQGSLRLWDSHVCGVSLLSHRWALTAAHCFETDLSDPSGWMVQFG- 99
Query: 559 HQLDSFSSSMTVRT------VAQVISHPSYLQEGSQGDIALLQLSSPVTFSRYIWPICLP 720
QL S S +++ V+ + P YL S DIAL++LS+PVT++++I PICL
Sbjct: 100 -QLTSMPSFWSLQAYYTRYFVSNIYLSPRYLGN-SPYDIALVKLSAPVTYTKHIQPICLQ 157
Query: 721 AANASFPNGLQCTVTGWGHVAPSVSLQRPRTLQQLEVPLISRETCNCLY-NIDANPDEPH 897
A+ F N C VTGWG++ +L P TLQ+++V +I+ CN L+ D
Sbjct: 158 ASTFEFENRTDCWVTGWGYIKEDEALPSPHTLQEVQVAIINNSMCNHLFLKYSFRKD--- 214
Query: 898 FIQQDMLCAGYVKGGKDACQGDSGGPLSCPAGGHWYLAGIVSWGDACGAPNRPGVYTLTS 1077
I DM+CAG +GGKDAC GDSGGPL+C G WY G+VSWG CG PNRPGVYT S
Sbjct: 215 -IFGDMVCAGNAQGGKDACFGDSGGPLACNKNGLWYQIGVVSWGVGCGRPNRPGVYTNIS 273
Query: 1078 TYASWIQHNVAELQPQVGTHIGESEPD 1158
+ WIQ +A+ G S+PD
Sbjct: 274 HHFEWIQKLMAQ--------SGMSQPD 292
>ref|NP_705837.1| transmembrane protease serine 6 [Homo sapiens].
Length = 811
Score = 211 bits (537), Expect = 1e-54
Identities = 112/262 (42%), Positives = 152/262 (58%), Gaps = 3/262 (1%)
Frame = +1
Query: 331 GAKGDAVSCGIVPQAQGRITGGSNSDPGQWPWQVSINYNGEHVCGGSLVSDQWVLSAAHC 510
G+ + CG+ + RI GG+ S G+WPWQ S+ G H+CGG+L++D+WV++AAHC
Sbjct: 560 GSDEEHCDCGLQGPSS-RIVGGAVSSEGEWPWQASLQVRGRHICGGALIADRWVITAAHC 618
Query: 511 FPRDH--STSAYEVKLGAHQLDSFSSSMTVRTVAQVISHPSYLQEGSQGDIALLQLSSPV 684
F D ST + V LG +S V++++ HP + ++ D+ALLQL PV
Sbjct: 619 FQEDSMASTVLWTVFLGKVWQNSRWPGEVSFKVSRLLLHPYHEEDSHDYDVALLQLDHPV 678
Query: 685 TFSRYIWPICLPAANASFPNGLQCTVTGWGHVAPSVSLQRPRTLQQLEVPLISRETCNCL 864
S + P+CLPA + F GL C +TGWG + + LQ+++V LI ++ C+ +
Sbjct: 679 VRSAAVRPVCLPARSHFFEPGLHCWITGWGALREGGPIS--NALQKVDVQLIPQDLCSEV 736
Query: 865 YNIDANPDEPHFIQQDMLCAGYVKGGKDACQGDSGGPLSCPA-GGHWYLAGIVSWGDACG 1041
Y P MLCAGY KG KDACQGDSGGPL C A G W+LAG+VSWG CG
Sbjct: 737 YRYQVTP--------RMLCAGYRKGKKDACQGDSGGPLVCKALSGRWFLAGLVSWGLGCG 788
Query: 1042 APNRPGVYTLTSTYASWIQHNV 1107
PN GVYT + SWIQ V
Sbjct: 789 RPNYFGVYTRITGVISWIQQVV 810
>ref|NP_006790.1| testisin isoform 1 [Homo sapiens].
Length = 314
Score = 209 bits (532), Expect = 4e-54
Identities = 117/269 (43%), Positives = 157/269 (58%), Gaps = 10/269 (3%)
Frame = +1
Query: 382 RITGGSNSDPGQWPWQVSINYNGEHVCGGSLVSDQWVLSAAHCFPRDHSTS---AYEVKL 552
RI GG +++ G+WPWQ S+ HVCG SL+S +W L+AAHCF S + V+
Sbjct: 41 RIVGGEDAELGRWPWQGSLRLWDSHVCGVSLLSHRWALTAAHCFETYSDLSDPSGWMVQF 100
Query: 553 GAHQLDSFSSSMTVRT------VAQVISHPSYLQEGSQGDIALLQLSSPVTFSRYIWPIC 714
G QL S S +++ V+ + P YL S DIAL++LS+PVT++++I PIC
Sbjct: 101 G--QLTSMPSFWSLQAYYTRYFVSNIYLSPRYLGN-SPYDIALVKLSAPVTYTKHIQPIC 157
Query: 715 LPAANASFPNGLQCTVTGWGHVAPSVSLQRPRTLQQLEVPLISRETCNCLY-NIDANPDE 891
L A+ F N C VTGWG++ +L P TLQ+++V +I+ CN L+ D
Sbjct: 158 LQASTFEFENRTDCWVTGWGYIKEDEALPSPHTLQEVQVAIINNSMCNHLFLKYSFRKD- 216
Query: 892 PHFIQQDMLCAGYVKGGKDACQGDSGGPLSCPAGGHWYLAGIVSWGDACGAPNRPGVYTL 1071
I DM+CAG +GGKDAC GDSGGPL+C G WY G+VSWG CG PNRPGVYT
Sbjct: 217 ---IFGDMVCAGNAQGGKDACFGDSGGPLACNKNGLWYQIGVVSWGVGCGRPNRPGVYTN 273
Query: 1072 TSTYASWIQHNVAELQPQVGTHIGESEPD 1158
S + WIQ +A+ G S+PD
Sbjct: 274 ISHHFEWIQKLMAQ--------SGMSQPD 294
>ref|NP_002763.2| enteropeptidase precursor [Homo sapiens].
Length = 1019
Score = 207 bits (526), Expect = 2e-53
Identities = 107/255 (41%), Positives = 144/255 (56%), Gaps = 6/255 (2%)
Frame = +1
Query: 352 SCGIVPQAQG---RITGGSNSDPGQWPWQVSINYNGEHVCGGSLVSDQWVLSAAHC-FPR 519
SCG AQ +I GGSN+ G WPW V + Y G +CG SLVS W++SAAHC + R
Sbjct: 771 SCGKKLAAQDITPKIVGGSNAKEGAWPWVVGLYYGGRLLCGASLVSSDWLVSAAHCVYGR 830
Query: 520 DHSTSAYEVKLGAHQLDSFSSSMTV-RTVAQVISHPSYLQEGSQGDIALLQLSSPVTFSR 696
+ S + LG H + +S TV R + +++ +P Y + DIA++ L V ++
Sbjct: 831 NLEPSKWTAILGLHMKSNLTSPQTVPRLIDEIVINPHYNRRRKDNDIAMMHLEFKVNYTD 890
Query: 697 YIWPICLPAANASFPNGLQCTVTGWGHVAPSVSLQRPRTLQQLEVPLISRETCNCLYNID 876
YI PICLP N FP G C++ GWG V + LQ+ +VPL+S E C
Sbjct: 891 YIQPICLPEENQVFPPGRNCSIAGWGTVVYQGTTAN--ILQEADVPLLSNERCQ------ 942
Query: 877 ANPDEPHF-IQQDMLCAGYVKGGKDACQGDSGGPLSCPAGGHWYLAGIVSWGDACGAPNR 1053
P + I ++M+CAGY +GG D+CQGDSGGPL C W+LAG+ S+G C PNR
Sbjct: 943 --QQMPEYNITENMICAGYEEGGIDSCQGDSGGPLMCQENNRWFLAGVTSFGYKCALPNR 1000
Query: 1054 PGVYTLTSTYASWIQ 1098
PGVY S + WIQ
Sbjct: 1001 PGVYARVSRFTEWIQ 1015
Database: RefSeq49_HP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,297,164
Number of sequences in database: 32,964
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 32964
Number of Hits to DB: 52,399,790
Number of extensions: 1527127
Number of successful extensions: 7789
Number of sequences better than 1.0e-05: 163
Number of HSP's gapped: 7268
Number of HSP's successfully gapped: 172
Length of query: 423
Length of database: 18,297,164
Length adjustment: 105
Effective length of query: 318
Effective length of database: 14,835,944
Effective search space: 4717830192
Effective search space used: 4717830192
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to Sscrofa10_2
BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-013283
(1270 letters)
Database: Sscrofa_10.2.fasta
4582 sequences; 2,808,509,378 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Sscrofa_Chr03 593 e-167
>Sscrofa_Chr03
|| Length = 144787322
Score = 593 bits (299), Expect = e-167
Identities = 323/332 (97%), Gaps = 1/332 (0%)
Strand = Plus / Minus
Query: 2 aggtgccctttcc-agggagctgccactccggaaggaaggtcgactccttccctggtggt 60
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17514540 aggtgccctttcccagggagctgccactccggaaggaaggtcgactccttccctggtggt 17514481
Query: 61 gctggagacgatccacactgccagctgctgggagcccagcgttnnnnnnngctgagcccg 120
||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 17514480 gctggagacgatccacactgccagctgctgggagcccagcgttcccccccgctgagcccg 17514421
Query: 121 cttcagcctctgaagccaggctcggacacctgttcccccttccctccggtcccaacactt 180
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17514420 cttcagtctctgaagccaggctcggacacctgttcccccttccctccggtcccaacactt 17514361
Query: 181 ggaacccagccctaggtcccttcccttaggtgcccggtgtcttcccagggcccctggtcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17514360 ggaacccagccctaggtcccttcccttaggtgcccggtgtcttcccagggcccctggtcc 17514301
Query: 241 tgggccatggcccagagggagggcctggggcctcgggggctggcggctgtggccactttg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17514300 tgggccatggcccagagggagggcctggggcctcgggggctggcggctgtggccactttg 17514241
Query: 301 atttcgcttggattgttccagaatgggatggg 332
||||||||||||||||||||||||||||||||
Sbjct: 17514240 atttcgcttggattgttccagaatgggatggg 17514209
Score = 579 bits (292), Expect = e-162
Identities = 310/316 (98%)
Strand = Plus / Minus
Query: 955 cagggtgactctgggggccccctctcctgcccagcagggggccactggtacctggcaggc 1014
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17511077 cagggtgactctgggggccccctctcctgcccagcagggggccactggtacctggcaggc 17511018
Query: 1015 atcgtaagctggggtgatgcctgtggggcccccaacaggcccggtgtgtacactctgact 1074
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17511017 atcgtaagctggggtgatgcctgtggggcccccaacaggcccggtgtgtacactctgact 17510958
Query: 1075 tccacctacgcctcctggattcaacacaatgtggcagagctccagcctcaagtgggtacc 1134
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 17510957 tccacctacgcctcctggattcaacacaatgtggcagagctccagcctcaagtggtaccc 17510898
Query: 1135 cacatcggggagtcggagcctgacagcgacctctgcagcaactacggcgcccttcacgct 1194
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 17510897 cacatcggggagtcggagcctgacagcgacctctgcagcaactacggcgccctcaacgct 17510838
Query: 1195 gcccccgcctggggcttggcgaggcccatccttctgctgccactaggcctgaccctgggc 1254
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17510837 gcccccgcctggggcttggcgaggcccatccttctgctgccactaggcctgaccctgggc 17510778
Query: 1255 ctcttccggccacggc 1270
||| ||||||||||||
Sbjct: 17510777 ctcctccggccacggc 17510762
Score = 535 bits (270), Expect = e-149
Identities = 273/274 (99%)
Strand = Plus / Minus
Query: 517 agggatcacagcaccagcgcctacgaggtgaagctgggggcccaccagctggacagtttc 576
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17511717 agggatcacagcaccagcgcctacgaggtgaagctgggggcccaccagctggacagtttc 17511658
Query: 577 agctccagcatgacagtccgaaccgtggcgcaggtcatttcccaccccagctacctccag 636
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17511657 agctccagcatgacagtccgaaccgtggcgcaggtcatttcccaccccagctacctccag 17511598
Query: 637 gaaggctcccagggggacatcgcactcctccagctcagcagccctgtcaccttctcccgc 696
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17511597 gaaggctccgagggggacatcgcactcctccagctcagcagccctgtcaccttctcccgc 17511538
Query: 697 tacatctggcccatctgtctccccgcggccaacgcctcctttcccaacggcctccagtgc 756
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17511537 tacatctggcccatctgtctccccgcggccaacgcctcctttcccaacggcctccagtgc 17511478
Query: 757 accgtcactggatggggccacgtggccccctcag 790
||||||||||||||||||||||||||||||||||
Sbjct: 17511477 accgtcactggatggggccacgtggccccctcag 17511444
Score = 345 bits (174), Expect = 4e-92
Identities = 174/174 (100%)
Strand = Plus / Minus
Query: 346 gcagtctcctgtggcatagtcccccaagcacaaggacggattacaggcggtagcaattca 405
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17512623 gcagtctcctgtggcatagtcccccaagcacaaggacggattacaggcggtagcaattca 17512564
Query: 406 gaccctggccagtggccctggcaggtcagcatcaactacaatggcgaacacgtgtgtggc 465
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17512563 gaccctggccagtggccctggcaggtcagcatcaactacaatggcgaacacgtgtgtggc 17512504
Query: 466 ggctctctcgtgtctgaccagtgggtgttgtcggctgctcactgcttcccaagg 519
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17512503 ggctctctcgtgtctgaccagtgggtgttgtcggctgctcactgcttcccaagg 17512450
Score = 339 bits (171), Expect = 2e-90
Identities = 171/171 (100%)
Strand = Plus / Minus
Query: 788 cagtgagcctccagcgccccaggaccctgcagcaacttgaggtgccgctgatcagtcgtg 847
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17511361 cagtgagcctccagcgccccaggaccctgcagcaacttgaggtgccgctgatcagtcgtg 17511302
Query: 848 agacctgtaactgcctatataacatcgacgccaaccccgacgagccccattttatccagc 907
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17511301 agacctgtaactgcctatataacatcgacgccaaccccgacgagccccattttatccagc 17511242
Query: 908 aggacatgctgtgcgccggctacgtgaaggggggcaaggacgcctgccagg 958
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17511241 aggacatgctgtgcgccggctacgtgaaggggggcaaggacgcctgccagg 17511191
Database: Sscrofa_10.2.fasta
Posted date: Nov 16, 2011 10:34 AM
Number of letters in database: 2,808,509,378
Number of sequences in database: 4582
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4582
Number of Hits to DB: 32,163,946
Number of extensions: 231
Number of successful extensions: 231
Number of sequences better than 1.0e-05: 1
Number of HSP's gapped: 230
Number of HSP's successfully gapped: 5
Length of query: 1270
Length of database: 2,808,509,378
Length adjustment: 21
Effective length of query: 1249
Effective length of database: 2,808,413,156
Effective search space: 3507708031844
Effective search space used: 3507708031844
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 18 (36.2 bits)
S2: 30 (60.0 bits)