Search to RefSeqBP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-013305
(960 letters)
Database: RefSeq49_BP.fasta
33,088 sequences; 17,681,374 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001007814.1| tumor necrosis factor-inducible gene 6 prote... 484 e-146
Alignment gi|NP_001192499.1| stabilin-1 [Bos taurus]. 111 8e-25
Alignment gi|XP_002697066.1| PREDICTED: stabilin-2-like [Bos taurus]. 111 8e-25
Alignment gi|NP_001193608.1| hyaluronan receptor for endocytosis-like [Bo... 109 4e-24
Alignment gi|NP_001069152.1| hyaluronan and proteoglycan link protein 2 [... 81 1e-15
Alignment gi|XP_002689817.1| PREDICTED: bone morphogenetic protein 1-like... 80 3e-15
Alignment gi|NP_001179504.1| cubilin [Bos taurus]. 79 6e-15
Alignment gi|XP_002692149.1| PREDICTED: cubilin-like [Bos taurus]. 79 6e-15
Alignment gi|XP_001788250.1| PREDICTED: bone morphogenetic protein 1-like... 79 8e-15
Alignment gi|XP_002688581.1| PREDICTED: KIAA1926 protein-like [Bos taurus]. 77 2e-14
>ref|NP_001007814.1| tumor necrosis factor-inducible gene 6 protein [Bos taurus].
Length = 280
Score = 484 bits (1247), Expect(2) = e-146
Identities = 222/230 (96%), Positives = 226/230 (98%)
Frame = +2
Query: 77 MIILIYLFVFLWEEAHGWGFKNGIFHNSIWLEQAAGVYHREARSGKYKLTYAEAKAVCEY 256
MIILIYLFV LWEEAHGWGFKNGIFHNSIWLEQAAGVYHREARSGKYKLTYAEAKAVCEY
Sbjct: 1 MIILIYLFVLLWEEAHGWGFKNGIFHNSIWLEQAAGVYHREARSGKYKLTYAEAKAVCEY 60
Query: 257 EGGRLATYKQLEAARKIGFHVCAAGWMAKGRVGYPIVKPGPNCGFGKTGIIDYGVRLNRS 436
EGG LATYKQLEAARKIGFHVCAAGWMAKGRVGYPIVKPGPNCGFGKTGIIDYG+RLNRS
Sbjct: 61 EGGHLATYKQLEAARKIGFHVCAAGWMAKGRVGYPIVKPGPNCGFGKTGIIDYGIRLNRS 120
Query: 437 ERWDAYCYNLHAKECGGVFTDPKRIFKSPGFPNEYDDNQICYWHIRLKYGQRIHVSFLNF 616
ERWDAYCYN HAKECGGVFTDPKRIFKSPGFPNEYDDNQICYWHIRLKYGQRIH+SFL+F
Sbjct: 121 ERWDAYCYNPHAKECGGVFTDPKRIFKSPGFPNEYDDNQICYWHIRLKYGQRIHLSFLDF 180
Query: 617 DLEDDPACLADYVEIYDSYDDVHGFVGRYCGAELPEDIISTGNVMTLKFL 766
DLEDDPACLADYVE+YDSYDDVHGFVGRYCG ELPEDIISTGNVMTLKFL
Sbjct: 181 DLEDDPACLADYVEVYDSYDDVHGFVGRYCGDELPEDIISTGNVMTLKFL 230
Score = 52.4 bits (124), Expect(2) = e-146
Identities = 25/31 (80%), Positives = 29/31 (93%)
Frame = +1
Query: 754 LEIPSDASVTAGGFQIQYVAVDPLSKTSQGK 846
L+ SDASVTAGGFQI+YVAVDP+SK+SQGK
Sbjct: 227 LKFLSDASVTAGGFQIKYVAVDPVSKSSQGK 257
>ref|NP_001192499.1| stabilin-1 [Bos taurus].
Length = 2568
Score = 111 bits (278), Expect = 8e-25
Identities = 47/104 (45%), Positives = 68/104 (65%)
Frame = +2
Query: 170 EQAAGVYHREARSGKYKLTYAEAKAVCEYEGGRLATYKQLEAARKIGFHVCAAGWMAKGR 349
E+ AGV+H +A SG Y L ++EA+A C +G LA+ QL AA+++G H+C GW+A G
Sbjct: 2201 EKRAGVFHLQAPSGPYGLNFSEAEAACGAQGAVLASLLQLSAAQQLGLHLCLVGWLANGS 2260
Query: 350 VGYPIVKPGPNCGFGKTGIIDYGVRLNRSERWDAYCYNLHAKEC 481
+P+V P +CG G+ G++ G R N SERWDAYC+ + C
Sbjct: 2261 AAHPVVFPAADCGDGQVGVVSLGARENLSERWDAYCFRMRDVAC 2304
>ref|XP_002697066.1| PREDICTED: stabilin-2-like [Bos taurus].
Length = 2568
Score = 111 bits (278), Expect = 8e-25
Identities = 47/104 (45%), Positives = 68/104 (65%)
Frame = +2
Query: 170 EQAAGVYHREARSGKYKLTYAEAKAVCEYEGGRLATYKQLEAARKIGFHVCAAGWMAKGR 349
E+ AGV+H +A SG Y L ++EA+A C +G LA+ QL AA+++G H+C GW+A G
Sbjct: 2201 EKRAGVFHLQAPSGPYGLNFSEAEAACGAQGAVLASLLQLSAAQQLGLHLCLVGWLANGS 2260
Query: 350 VGYPIVKPGPNCGFGKTGIIDYGVRLNRSERWDAYCYNLHAKEC 481
+P+V P +CG G+ G++ G R N SERWDAYC+ + C
Sbjct: 2261 AAHPVVFPAADCGDGQVGVVSLGARENLSERWDAYCFRMRDVAC 2304
>ref|NP_001193608.1| hyaluronan receptor for endocytosis-like [Bos taurus].
Length = 2549
Score = 109 bits (272), Expect = 4e-24
Identities = 46/104 (44%), Positives = 63/104 (60%)
Frame = +2
Query: 170 EQAAGVYHREARSGKYKLTYAEAKAVCEYEGGRLATYKQLEAARKIGFHVCAAGWMAKGR 349
+ GV+H + G+YKLT+ +A+ C E +ATY QL A+K +H+C+AGW+ GR
Sbjct: 2193 DTTVGVFHLRSPLGQYKLTFDKAREACAQEAATMATYNQLSYAQKAKYHLCSAGWLDSGR 2252
Query: 350 VGYPIVKPGPNCGFGKTGIIDYGVRLNRSERWDAYCYNLHAKEC 481
V YP NCG G GI+DYG R N+SE WD +CY + C
Sbjct: 2253 VAYPTSYASQNCGSGIVGIVDYGPRNNKSEMWDVFCYRMKDVNC 2296
>ref|NP_001069152.1| hyaluronan and proteoglycan link protein 2 [Bos taurus].
Length = 340
Score = 81.3 bits (199), Expect = 1e-15
Identities = 49/127 (38%), Positives = 67/127 (52%), Gaps = 3/127 (2%)
Frame = +2
Query: 140 NGIFHNSI--WLEQAAGVYHREARSGKYKLTYAEAKAVCEYEGGRLATYKQLEAARKIGF 313
NGI S+ L V+ + G+Y+ Y EAK CE + GRLATY QL A G
Sbjct: 133 NGIEDESVAMTLRLEGVVFPYQPSRGRYQFNYYEAKQACEEQDGRLATYAQLYQAWTEGL 192
Query: 314 HVCAAGWMAKGRVGYPIVKPGPNC-GFGKTGIIDYGVRLNRSERWDAYCYNLHAKECGGV 490
C AGW+ +G V YP++ C G G+ GI YG R + +R+DA+C+ + G V
Sbjct: 193 DWCNAGWLLEGSVRYPVLTARAPCGGRGRPGIRSYGPRDRKRDRYDAFCFT--SALSGHV 250
Query: 491 FTDPKRI 511
F P R+
Sbjct: 251 FFVPGRL 257
Score = 53.1 bits (126), Expect = 3e-07
Identities = 29/84 (34%), Positives = 40/84 (47%), Gaps = 2/84 (2%)
Frame = +2
Query: 218 KLTYAEAKAVCEYEGGRLATYKQLEAARKI-GFHVCAAGWMAKGRVGYPIVKPGPNC-GF 391
+L+ +EA A C G +A L AA K G C GW+A G V +PI P P C G
Sbjct: 256 RLSLSEAHAACRRRGAMVAKVGHLYAAWKFSGLDQCDGGWLADGSVRFPITTPRPRCGGL 315
Query: 392 GKTGIIDYGVRLNRSERWDAYCYN 463
G+ +G + + YCY+
Sbjct: 316 PDPGVRSFGFPRPQQADYGTYCYS 339
>ref|XP_002689817.1| PREDICTED: bone morphogenetic protein 1-like [Bos taurus].
Length = 946
Score = 80.1 bits (196), Expect = 3e-15
Identities = 33/96 (34%), Positives = 58/96 (60%)
Frame = +2
Query: 479 CGGVFTDPKRIFKSPGFPNEYDDNQICYWHIRLKYGQRIHVSFLNFDLEDDPACLADYVE 658
CGG +SP +P++Y +++C W I++ G + ++F +F++E +C DY+E
Sbjct: 437 CGGDVKKDNGHIQSPNYPDDYRPSKVCVWRIQVSEGFHVGLTFQSFEIERHDSCAYDYLE 496
Query: 659 IYDSYDDVHGFVGRYCGAELPEDIISTGNVMTLKFL 766
+ D + + +GRYCG E P+DI ST + + LKF+
Sbjct: 497 VRDGHSESSTLIGRYCGYEKPDDIKSTSSRLWLKFV 532
Score = 78.6 bits (192), Expect = 8e-15
Identities = 33/95 (34%), Positives = 53/95 (55%)
Frame = +2
Query: 479 CGGVFTDPKRIFKSPGFPNEYDDNQICYWHIRLKYGQRIHVSFLNFDLEDDPACLADYVE 658
C T SP +P++Y + C W I G R+ ++F+ D+E P C D++E
Sbjct: 707 CDHKVTSSSGTITSPNWPDKYPSKKECTWAISSTPGHRVKLTFMEMDIESQPECAYDHLE 766
Query: 659 IYDSYDDVHGFVGRYCGAELPEDIISTGNVMTLKF 763
+YD D +GR+CG++ PE +++TGN M L+F
Sbjct: 767 VYDGRDSKAPVLGRFCGSKKPEPVLATGNRMFLRF 801
Score = 70.9 bits (172), Expect = 2e-12
Identities = 34/95 (35%), Positives = 51/95 (53%)
Frame = +2
Query: 479 CGGVFTDPKRIFKSPGFPNEYDDNQICYWHIRLKYGQRIHVSFLNFDLEDDPACLADYVE 658
CG D F SP +PN Y + C W I + G++I ++F + DL C DYVE
Sbjct: 324 CGETLQDSTGNFSSPEYPNGYSAHMHCVWRISVTPGEKIILNFTSMDLYRSRLCWYDYVE 383
Query: 659 IYDSYDDVHGFVGRYCGAELPEDIISTGNVMTLKF 763
+ D + GR+CG +LPE I+ST + + ++F
Sbjct: 384 VRDGFWRKAPLRGRFCGGKLPEPIVSTDSRLWVEF 418
Score = 67.0 bits (162), Expect = 2e-11
Identities = 34/103 (33%), Positives = 54/103 (52%), Gaps = 4/103 (3%)
Frame = +2
Query: 467 HAKECGGVF---TDPKRIFKSPGF-PNEYDDNQICYWHIRLKYGQRIHVSFLNFDLEDDP 634
H+ ECGG K ++ F N Y C W I + G + + F F++E++
Sbjct: 816 HSTECGGQVRAEVKTKDLYSHAQFGDNNYPGGVDCEWVIVAEEGYGVELVFQTFEVEEET 875
Query: 635 ACLADYVEIYDSYDDVHGFVGRYCGAELPEDIISTGNVMTLKF 763
C DY+E++D YD +GRYCG+ PE++ S G+ + +KF
Sbjct: 876 DCGYDYMELFDGYDSTAPRLGRYCGSGPPEEVYSAGDSVLVKF 918
Score = 65.1 bits (157), Expect = 9e-11
Identities = 34/104 (32%), Positives = 48/104 (46%)
Frame = +2
Query: 452 YCYNLHAKECGGVFTDPKRIFKSPGFPNEYDDNQICYWHIRLKYGQRIHVSFLNFDLEDD 631
+ N CGG T SPG+P EY N+ C W + RI + F F+ E +
Sbjct: 542 FAVNFFKAACGGFLTKLNGSITSPGWPKEYPPNKNCIWQLVAPTQYRISLQFDFFETEGN 601
Query: 632 PACLADYVEIYDSYDDVHGFVGRYCGAELPEDIISTGNVMTLKF 763
C D+VE+ G++CG+E PE I S N M ++F
Sbjct: 602 DVCKYDFVEVRSGLTADSKLHGKFCGSEKPEVITSQYNNMRVEF 645
>ref|NP_001179504.1| cubilin [Bos taurus].
Length = 3620
Score = 79.0 bits (193), Expect = 6e-15
Identities = 39/99 (39%), Positives = 53/99 (53%)
Frame = +2
Query: 470 AKECGGVFTDPKRIFKSPGFPNEYDDNQICYWHIRLKYGQRIHVSFLNFDLEDDPACLAD 649
A CG V T+ +SPG+PN Y C WHI ++ G IH+ F F LE C D
Sbjct: 925 ALACGKVLTESTGSIQSPGYPNIYPHGISCTWHIIVQPGHLIHLRFREFHLEFHYNCTKD 984
Query: 650 YVEIYDSYDDVHGFVGRYCGAELPEDIISTGNVMTLKFL 766
Y+E+YD+ F+GRYCG +P + S N + L F+
Sbjct: 985 YLEVYDTGSQT--FLGRYCGKSIPPSLTSNDNSVRLTFV 1021
Score = 73.9 bits (180), Expect = 2e-13
Identities = 42/98 (42%), Positives = 50/98 (51%), Gaps = 2/98 (2%)
Frame = +2
Query: 479 CGGVF-TDPKRIFKSPGFPNEYDDNQICYWHIRLKYG-QRIHVSFLNFDLEDDPACLADY 652
CGG F TD SP FPN Y NQ C W I+ + I +SF +F LE C D+
Sbjct: 1617 CGGHFLTDSVDTISSPLFPNNYPSNQNCSWIIQAQPPFNHITLSFSHFGLESSTPCTRDF 1676
Query: 653 VEIYDSYDDVHGFVGRYCGAELPEDIISTGNVMTLKFL 766
VE+ D D GRYCG LP I S N + LKF+
Sbjct: 1677 VEVLDGSHDDAPLRGRYCGPSLPHPITSFSNALMLKFV 1714
Score = 72.8 bits (177), Expect = 4e-13
Identities = 39/97 (40%), Positives = 54/97 (55%), Gaps = 2/97 (2%)
Frame = +2
Query: 479 CGGVFTDPKRIFKSPGFPNEYDDNQICYWHIRLKYGQRIHVSFLNFDLED--DPACLADY 652
C +T+ F SP FP Y +N C + I ++ Q+I + F NF LED C+ADY
Sbjct: 1044 CLNDYTEESGTFTSPNFPGFYPNNLECIYRITVESSQQIALHFTNFSLEDAIGSTCVADY 1103
Query: 653 VEIYDSYDDVHGFVGRYCGAELPEDIISTGNVMTLKF 763
VEI + + +G+YCG+ LP IIS N + LKF
Sbjct: 1104 VEIRNGGYENSPLLGQYCGSNLPPRIISHSNKLWLKF 1140
Score = 72.8 bits (177), Expect = 4e-13
Identities = 36/104 (34%), Positives = 57/104 (54%), Gaps = 1/104 (0%)
Frame = +2
Query: 458 YNLHAKECGGVFTDPKRIFKSPGFPNEYDDNQICYWHIRLKYGQRIHVSFLNFDLEDDPA 637
Y CGG+F + IF SPG+P Y N C W++ G ++ +SF+ F LE+
Sbjct: 1728 YAASTSACGGIFHMAEGIFNSPGYPEVYPANVECVWNVVSSPGNQLQLSFIAFQLEESQD 1787
Query: 638 CLADYVEIYDSYDDVHGFVGRYCGAELPEDIIS-TGNVMTLKFL 766
C D+VE+ + + VGRYCG LP + S G+++ ++F+
Sbjct: 1788 CSRDFVEVREG-NATGRLVGRYCGNALPLNYSSAVGHILWIRFV 1830
Score = 67.8 bits (164), Expect = 1e-11
Identities = 30/97 (30%), Positives = 55/97 (56%), Gaps = 1/97 (1%)
Frame = +2
Query: 479 CGGVFTDPKRIFKSPGFPNE-YDDNQICYWHIRLKYGQRIHVSFLNFDLEDDPACLADYV 655
CGG T + +S G+P + Y D+ C W +R G + + F F+L++ C D+V
Sbjct: 2333 CGGAVTGQSGVIESNGYPTQPYTDDLFCEWRLRGPLGHYLTIHFEGFNLQNSSGCERDFV 2392
Query: 656 EIYDSYDDVHGFVGRYCGAELPEDIISTGNVMTLKFL 766
EI++++ +GRYCG+ +P + ++ NV ++F+
Sbjct: 2393 EIWENHTS-GTLLGRYCGSSIPSSMDTSSNVALVRFV 2428
Score = 64.3 bits (155), Expect = 2e-10
Identities = 33/94 (35%), Positives = 45/94 (47%)
Frame = +2
Query: 479 CGGVFTDPKRIFKSPGFPNEYDDNQICYWHIRLKYGQRIHVSFLNFDLEDDPACLADYVE 658
CGG T F SP +P Y + C W ++ G + F +F LE P C DY+
Sbjct: 1162 CGGNLTTSTGTFTSPNYPMPYYHSSECSWWLKASRGSPFLLEFEDFHLEYHPNCSQDYLA 1221
Query: 659 IYDSYDDVHGFVGRYCGAELPEDIISTGNVMTLK 760
+YD + R CG E P I S+G+ M+LK
Sbjct: 1222 VYDGSSTSSHLLTRLCGNEKPSVIRSSGDSMSLK 1255
Score = 64.3 bits (155), Expect = 2e-10
Identities = 33/98 (33%), Positives = 49/98 (50%), Gaps = 3/98 (3%)
Frame = +2
Query: 479 CGGVFTDPKRIFKSPGFPNEYDDNQICYWHIRLKYGQRIHVSFLNFDLEDDPACLADYVE 658
CGG + F SPG+PN Y N+ C W+I G I ++ +FD+E C D +E
Sbjct: 1388 CGGELSGDTGSFSSPGYPNRYPANKECIWYIHTAPGSSIQLTIHDFDVEYHARCNFDVLE 1447
Query: 659 IYDSYDDVHGFVGRYC---GAELPEDIISTGNVMTLKF 763
IY D + + C +E P + STGN + ++F
Sbjct: 1448 IYGGPDFHSPRIAQLCVQRSSENPMQVSSTGNELAIRF 1485
Score = 61.6 bits (148), Expect = 1e-09
Identities = 35/109 (32%), Positives = 53/109 (48%), Gaps = 5/109 (4%)
Frame = +2
Query: 479 CGGVFTDPKRIFKSPGFPNE--YDDNQICYWHIRLKYGQRIHVSFLNFDLEDDPA---CL 643
CGG T F SP + YD C W I + I ++F F LE C+
Sbjct: 3154 CGGYLTGSDHSFASPDSDSNGRYDKGLNCVWFITAPVNKVIKLTFHTFALEAATTLRRCI 3213
Query: 644 ADYVEIYDSYDDVHGFVGRYCGAELPEDIISTGNVMTLKFLVMLP*QQE 790
DYV++YD + G +CG+ +P IS+GN +T++F+ L ++E
Sbjct: 3214 YDYVKLYDGDSENANLAGTFCGSTVPAPFISSGNFLTVQFVSDLSLERE 3262
Score = 60.5 bits (145), Expect = 2e-09
Identities = 31/95 (32%), Positives = 51/95 (53%)
Frame = +2
Query: 479 CGGVFTDPKRIFKSPGFPNEYDDNQICYWHIRLKYGQRIHVSFLNFDLEDDPACLADYVE 658
CGG+F P SP +P+ Y N C W I+++ R+ ++F +FDLE +C+ +
Sbjct: 1507 CGGIFQAPSGEIHSPNYPSPYRSNTECTWVIQVEKHHRVLLNFTDFDLEPQDSCVLAFDG 1566
Query: 659 IYDSYDDVHGFVGRYCGAELPEDIISTGNVMTLKF 763
+ + + G GR +L IIS+GN + L+F
Sbjct: 1567 VSSATARLAGVCGR---QQLRNPIISSGNSLFLRF 1598
Score = 59.7 bits (143), Expect = 4e-09
Identities = 31/103 (30%), Positives = 54/103 (52%), Gaps = 1/103 (0%)
Frame = +2
Query: 458 YNLHAKECGGVFTDPKRIFKSPGFP-NEYDDNQICYWHIRLKYGQRIHVSFLNFDLEDDP 634
++ CGGVF + KSP + + Y D+ C + I ++ + I + F +F +
Sbjct: 3027 FSYRITSCGGVFNLSTGVIKSPLYTYSNYPDDVHCLYTITVRSNRVIQLKFNDFYVVPSA 3086
Query: 635 ACLADYVEIYDSYDDVHGFVGRYCGAELPEDIISTGNVMTLKF 763
+C DY+ +YD + +G++CG+ LP +I S+ N M L F
Sbjct: 3087 SCSEDYLAVYDGSNISDPLLGQFCGSNLPPNIRSSNNSMFLVF 3129
Score = 58.2 bits (139), Expect = 1e-08
Identities = 33/107 (30%), Positives = 49/107 (45%), Gaps = 5/107 (4%)
Frame = +2
Query: 458 YNLHAKECGGVF----TDPKRIFKSPGFPNEYDDNQICYWHIRLKYGQRIHVSFLN-FDL 622
Y + CGG D SP P+ Y + C W I G+ I + F F +
Sbjct: 2207 YEAKSLACGGNIYIHNADSTGYVTSPNHPDHYPQHADCIWLIAAPPGKLIRLQFEGQFSI 2266
Query: 623 EDDPACLADYVEIYDSYDDVHGFVGRYCGAELPEDIISTGNVMTLKF 763
E P C ++Y+E+ D D + ++CG LP +S+G VM L+F
Sbjct: 2267 EVTPNCTSNYLELRDGADSNAPILSKFCGTSLPISQLSSGEVMYLRF 2313
Score = 57.8 bits (138), Expect = 1e-08
Identities = 28/79 (35%), Positives = 43/79 (54%)
Frame = +2
Query: 527 FPNEYDDNQICYWHIRLKYGQRIHVSFLNFDLEDDPACLADYVEIYDSYDDVHGFVGRYC 706
+PN Y NQ C W I+ G ++ +FL F+LE C DY+E+YD +GR+C
Sbjct: 1293 YPNPYSVNQRCNWTIQATTGNTVNYTFLAFELEYYTNCSTDYLELYDGPQR----MGRFC 1348
Query: 707 GAELPEDIISTGNVMTLKF 763
G ++P +TG+ + F
Sbjct: 1349 GTDIPPSGSTTGSKFHVLF 1367
Score = 57.0 bits (136), Expect = 2e-08
Identities = 33/98 (33%), Positives = 52/98 (53%), Gaps = 2/98 (2%)
Frame = +2
Query: 479 CGGVFTDPKRIFKSPGFPNEYDDNQICYWHIRLKYGQRIHVSFLNFDLEDDPACLADYVE 658
CGG T + I +SP +PN Y ++C W IR Q + ++F FD+ C DYVE
Sbjct: 813 CGGELTG-EGIIRSPFYPNVYPGERVCVWTIRQPQSQVVLLNFTAFDMGGSAHCDTDYVE 871
Query: 659 IYDSYDDVHGFV--GRYCGAELPEDIISTGNVMTLKFL 766
+ S + G + ++CGA++P I S N + + F+
Sbjct: 872 VGSS--SILGSLKNEKHCGADIPSFITSVYNSLHVIFV 907
Score = 57.0 bits (136), Expect = 2e-08
Identities = 29/96 (30%), Positives = 46/96 (47%), Gaps = 1/96 (1%)
Frame = +2
Query: 479 CGGVFTDPKRIFKSPGFPNEYDDNQICYWHIRLKYGQRIHVSFLNFDLEDDPACLADYVE 658
CGG SPG+P Y +N C W I G+ + VSF ++D C+ +Y+
Sbjct: 3508 CGGTLYGDSGSVTSPGYPGTYPNNTHCEWAILAPAGRPVTVSFYFISIDDPGECVQNYLL 3567
Query: 659 IYDSYDDVHGFVGRYCGAELP-EDIISTGNVMTLKF 763
+YD D G YCGA+ +++ + + +KF
Sbjct: 3568 LYDGPDANSPSSGPYCGADTDIAPFVASSHCVFIKF 3603
Score = 55.8 bits (133), Expect = 5e-08
Identities = 28/96 (29%), Positives = 43/96 (44%)
Frame = +2
Query: 476 ECGGVFTDPKRIFKSPGFPNEYDDNQICYWHIRLKYGQRIHVSFLNFDLEDDPACLADYV 655
+CGG+ + SP +P YD C W + G I+++F +FD+E C D V
Sbjct: 2685 DCGGIQIGDSGVISSPNYPAAYDSLTHCSWLLEAPQGHTINLTFSDFDVEAHENCAWDSV 2744
Query: 656 EIYDSYDDVHGFVGRYCGAELPEDIISTGNVMTLKF 763
+ + +G YCG P I S N + + F
Sbjct: 2745 TVRNGGSPGSPIIGHYCGILNPGTIQSGSNQLVVIF 2780
Score = 54.7 bits (130), Expect = 1e-07
Identities = 32/111 (28%), Positives = 46/111 (41%)
Frame = +2
Query: 431 RSERWDAYCYNLHAKECGGVFTDPKRIFKSPGFPNEYDDNQICYWHIRLKYGQRIHVSFL 610
RSER + ECGG+ T KSPG+P +Y + C W + I +F
Sbjct: 571 RSERGFTIRWETQLPECGGMLTGTYGSIKSPGYPGKYPPGRDCVWRVITSPDLLITFTFG 630
Query: 611 NFDLEDDPACLADYVEIYDSYDDVHGFVGRYCGAELPEDIISTGNVMTLKF 763
LE C DY+EI D +G++C + +TG + F
Sbjct: 631 TLSLEHHDDCSKDYLEIRDGPLHQDPVLGKFCTTLSAPPLQTTGPFARIHF 681
Score = 53.5 bits (127), Expect = 3e-07
Identities = 25/83 (30%), Positives = 42/83 (50%)
Frame = +2
Query: 515 KSPGFPNEYDDNQICYWHIRLKYGQRIHVSFLNFDLEDDPACLADYVEIYDSYDDVHGFV 694
+SPG+P++Y N C + I + F +F +ED C D++E+ + + +
Sbjct: 3404 RSPGWPSDYASNVDCTTVLTAPDNHTISLFFHSFGIEDSSGCTHDFLEVRNGSESSSPLL 3463
Query: 695 GRYCGAELPEDIISTGNVMTLKF 763
G YCG LP I S + + L+F
Sbjct: 3464 GTYCGTLLPNPIFSQSHELYLRF 3486
Score = 51.6 bits (122), Expect = 1e-06
Identities = 26/105 (24%), Positives = 52/105 (49%), Gaps = 2/105 (1%)
Frame = +2
Query: 443 WDAYCYNLHAKECGGVFTDPKRIFK--SPGFPNEYDDNQICYWHIRLKYGQRIHVSFLNF 616
W + ++ + CG + F SP +D N C+W I + G+ + ++F F
Sbjct: 459 WTGFLCHIPQEVCGESLSGMNGSFSFVSPDVAYAHDIN--CFWVIHTEEGKVLRITFTFF 516
Query: 617 DLEDDPACLADYVEIYDSYDDVHGFVGRYCGAELPEDIISTGNVM 751
LE C ++++I+D +GR+CG+ P++++S+ N +
Sbjct: 517 QLEPTNNCPHEFLQIHDGDSSAAHQLGRFCGSSPPQELLSSDNAL 561
Score = 51.6 bits (122), Expect = 1e-06
Identities = 33/107 (30%), Positives = 51/107 (47%), Gaps = 9/107 (8%)
Frame = +2
Query: 473 KECGGVFTDPKRIFKSPGFPNEYDDNQICYWHIRLKYGQRIHVSFLN-FD-LEDDPAC-L 643
K CGG + I SP +P Y N C WH++++ G I V F F L D +C
Sbjct: 2087 KSCGGYLHADRGIITSPRYPETYTPNLNCSWHVQVQSGLTIAVHFEQPFQILNRDSSCNQ 2146
Query: 644 ADYVEIYDSYD------DVHGFVGRYCGAELPEDIISTGNVMTLKFL 766
DY+ + + D HG GR+CG+ + ++ N M ++F+
Sbjct: 2147 GDYLVLKNGPDLSSPPLGPHGGNGRFCGSHPSSTLFTSDNQMFVQFI 2193
Score = 50.4 bits (119), Expect = 2e-06
Identities = 27/82 (32%), Positives = 39/82 (47%)
Frame = +2
Query: 518 SPGFPNEYDDNQICYWHIRLKYGQRIHVSFLNFDLEDDPACLADYVEIYDSYDDVHGFVG 697
SP +P Y N W + ++ Q IH L D+E C D ++IYD VG
Sbjct: 1862 SPLWPGNYPHNSNYQWIVNVEESQVIHARILEMDMEGTLNCYYDKLKIYDGAGIHSRLVG 1921
Query: 698 RYCGAELPEDIISTGNVMTLKF 763
YCG + + STG+ +T +F
Sbjct: 1922 TYCGTQ-TDSFSSTGSSLTFQF 1942
Score = 49.3 bits (116), Expect = 5e-06
Identities = 29/97 (29%), Positives = 43/97 (44%), Gaps = 2/97 (2%)
Frame = +2
Query: 479 CGGVFT--DPKRIFKSPGFPNEYDDNQICYWHIRLKYGQRIHVSFLNFDLEDDPACLADY 652
CGG D SPG+P Y + C W I+ + ++ L+ D+E C D
Sbjct: 1975 CGGFLQTGDTPVFLYSPGWPESYSNGANCMWLIQAP-DSTVELNILSLDIESHSTCSYDK 2033
Query: 653 VEIYDSYDDVHGFVGRYCGAELPEDIISTGNVMTLKF 763
+ I D + + + CG E+P I STG M + F
Sbjct: 2034 LVIRDGDNSMAQELAVLCGREVPGPIRSTGEYMVIHF 2070
>ref|XP_002692149.1| PREDICTED: cubilin-like [Bos taurus].
Length = 3620
Score = 79.0 bits (193), Expect = 6e-15
Identities = 39/99 (39%), Positives = 53/99 (53%)
Frame = +2
Query: 470 AKECGGVFTDPKRIFKSPGFPNEYDDNQICYWHIRLKYGQRIHVSFLNFDLEDDPACLAD 649
A CG V T+ +SPG+PN Y C WHI ++ G IH+ F F LE C D
Sbjct: 925 ALACGKVLTESTGSIQSPGYPNIYPHGISCTWHIIVQPGHLIHLRFREFHLEFHYNCTKD 984
Query: 650 YVEIYDSYDDVHGFVGRYCGAELPEDIISTGNVMTLKFL 766
Y+E+YD+ F+GRYCG +P + S N + L F+
Sbjct: 985 YLEVYDTGSQT--FLGRYCGKSIPPSLTSNDNSVRLTFV 1021
Score = 73.9 bits (180), Expect = 2e-13
Identities = 42/98 (42%), Positives = 50/98 (51%), Gaps = 2/98 (2%)
Frame = +2
Query: 479 CGGVF-TDPKRIFKSPGFPNEYDDNQICYWHIRLKYG-QRIHVSFLNFDLEDDPACLADY 652
CGG F TD SP FPN Y NQ C W I+ + I +SF +F LE C D+
Sbjct: 1617 CGGHFLTDSVDTISSPLFPNNYPSNQNCSWIIQAQPPFNHITLSFSHFGLESSTPCTRDF 1676
Query: 653 VEIYDSYDDVHGFVGRYCGAELPEDIISTGNVMTLKFL 766
VE+ D D GRYCG LP I S N + LKF+
Sbjct: 1677 VEVLDGSHDDAPLRGRYCGPSLPHPITSFSNALMLKFV 1714
Score = 72.8 bits (177), Expect = 4e-13
Identities = 39/97 (40%), Positives = 54/97 (55%), Gaps = 2/97 (2%)
Frame = +2
Query: 479 CGGVFTDPKRIFKSPGFPNEYDDNQICYWHIRLKYGQRIHVSFLNFDLED--DPACLADY 652
C +T+ F SP FP Y +N C + I ++ Q+I + F NF LED C+ADY
Sbjct: 1044 CLNDYTEESGTFTSPNFPGFYPNNLECIYRITVESSQQIALHFTNFSLEDAIGSTCVADY 1103
Query: 653 VEIYDSYDDVHGFVGRYCGAELPEDIISTGNVMTLKF 763
VEI + + +G+YCG+ LP IIS N + LKF
Sbjct: 1104 VEIRNGGYENSPLLGQYCGSNLPPRIISHSNKLWLKF 1140
Score = 72.8 bits (177), Expect = 4e-13
Identities = 36/104 (34%), Positives = 57/104 (54%), Gaps = 1/104 (0%)
Frame = +2
Query: 458 YNLHAKECGGVFTDPKRIFKSPGFPNEYDDNQICYWHIRLKYGQRIHVSFLNFDLEDDPA 637
Y CGG+F + IF SPG+P Y N C W++ G ++ +SF+ F LE+
Sbjct: 1728 YAASTSACGGIFHMAEGIFNSPGYPEVYPANVECVWNVVSSPGNQLQLSFIAFQLEESQD 1787
Query: 638 CLADYVEIYDSYDDVHGFVGRYCGAELPEDIIS-TGNVMTLKFL 766
C D+VE+ + + VGRYCG LP + S G+++ ++F+
Sbjct: 1788 CSRDFVEVREG-NATGRLVGRYCGNALPLNYSSAVGHILWIRFV 1830
Score = 67.8 bits (164), Expect = 1e-11
Identities = 30/97 (30%), Positives = 55/97 (56%), Gaps = 1/97 (1%)
Frame = +2
Query: 479 CGGVFTDPKRIFKSPGFPNE-YDDNQICYWHIRLKYGQRIHVSFLNFDLEDDPACLADYV 655
CGG T + +S G+P + Y D+ C W +R G + + F F+L++ C D+V
Sbjct: 2333 CGGAVTGQSGVIESNGYPTQPYTDDLFCEWRLRGPLGHYLTIHFEGFNLQNSSGCERDFV 2392
Query: 656 EIYDSYDDVHGFVGRYCGAELPEDIISTGNVMTLKFL 766
EI++++ +GRYCG+ +P + ++ NV ++F+
Sbjct: 2393 EIWENHTS-GTLLGRYCGSSIPSSMDTSSNVALVRFV 2428
Score = 64.3 bits (155), Expect = 2e-10
Identities = 33/94 (35%), Positives = 45/94 (47%)
Frame = +2
Query: 479 CGGVFTDPKRIFKSPGFPNEYDDNQICYWHIRLKYGQRIHVSFLNFDLEDDPACLADYVE 658
CGG T F SP +P Y + C W ++ G + F +F LE P C DY+
Sbjct: 1162 CGGNLTTSTGTFTSPNYPMPYYHSSECSWWLKASRGSPFLLEFEDFHLEYHPNCSQDYLA 1221
Query: 659 IYDSYDDVHGFVGRYCGAELPEDIISTGNVMTLK 760
+YD + R CG E P I S+G+ M+LK
Sbjct: 1222 VYDGSSTSSHLLTRLCGNEKPSVIRSSGDSMSLK 1255
Score = 64.3 bits (155), Expect = 2e-10
Identities = 33/98 (33%), Positives = 49/98 (50%), Gaps = 3/98 (3%)
Frame = +2
Query: 479 CGGVFTDPKRIFKSPGFPNEYDDNQICYWHIRLKYGQRIHVSFLNFDLEDDPACLADYVE 658
CGG + F SPG+PN Y N+ C W+I G I ++ +FD+E C D +E
Sbjct: 1388 CGGELSGDTGSFSSPGYPNRYPANKECIWYIHTAPGSSIQLTIHDFDVEYHARCNFDVLE 1447
Query: 659 IYDSYDDVHGFVGRYC---GAELPEDIISTGNVMTLKF 763
IY D + + C +E P + STGN + ++F
Sbjct: 1448 IYGGPDFHSPRIAQLCVQRSSENPMQVSSTGNELAIRF 1485
Score = 61.6 bits (148), Expect = 1e-09
Identities = 35/109 (32%), Positives = 53/109 (48%), Gaps = 5/109 (4%)
Frame = +2
Query: 479 CGGVFTDPKRIFKSPGFPNE--YDDNQICYWHIRLKYGQRIHVSFLNFDLEDDPA---CL 643
CGG T F SP + YD C W I + I ++F F LE C+
Sbjct: 3154 CGGYLTGSDHSFASPDSDSNGRYDKGLNCVWFITAPVNKVIKLTFHTFALEAATTLRRCI 3213
Query: 644 ADYVEIYDSYDDVHGFVGRYCGAELPEDIISTGNVMTLKFLVMLP*QQE 790
DYV++YD + G +CG+ +P IS+GN +T++F+ L ++E
Sbjct: 3214 YDYVKLYDGDSENANLAGTFCGSTVPAPFISSGNFLTVQFVSDLSLERE 3262
Score = 60.5 bits (145), Expect = 2e-09
Identities = 31/95 (32%), Positives = 51/95 (53%)
Frame = +2
Query: 479 CGGVFTDPKRIFKSPGFPNEYDDNQICYWHIRLKYGQRIHVSFLNFDLEDDPACLADYVE 658
CGG+F P SP +P+ Y N C W I+++ R+ ++F +FDLE +C+ +
Sbjct: 1507 CGGIFQAPSGEIHSPNYPSPYRSNTECTWVIQVEKHHRVLLNFTDFDLEPQDSCVLAFDG 1566
Query: 659 IYDSYDDVHGFVGRYCGAELPEDIISTGNVMTLKF 763
+ + + G GR +L IIS+GN + L+F
Sbjct: 1567 VSSATARLAGVCGR---QQLRNPIISSGNSLFLRF 1598
Score = 59.7 bits (143), Expect = 4e-09
Identities = 31/103 (30%), Positives = 54/103 (52%), Gaps = 1/103 (0%)
Frame = +2
Query: 458 YNLHAKECGGVFTDPKRIFKSPGFP-NEYDDNQICYWHIRLKYGQRIHVSFLNFDLEDDP 634
++ CGGVF + KSP + + Y D+ C + I ++ + I + F +F +
Sbjct: 3027 FSYRITSCGGVFNLSTGVIKSPLYTYSNYPDDVHCLYTITVRSNRVIQLKFNDFYVVPSA 3086
Query: 635 ACLADYVEIYDSYDDVHGFVGRYCGAELPEDIISTGNVMTLKF 763
+C DY+ +YD + +G++CG+ LP +I S+ N M L F
Sbjct: 3087 SCSEDYLAVYDGSNISDPLLGQFCGSNLPPNIRSSNNSMFLVF 3129
Score = 58.2 bits (139), Expect = 1e-08
Identities = 33/107 (30%), Positives = 49/107 (45%), Gaps = 5/107 (4%)
Frame = +2
Query: 458 YNLHAKECGGVF----TDPKRIFKSPGFPNEYDDNQICYWHIRLKYGQRIHVSFLN-FDL 622
Y + CGG D SP P+ Y + C W I G+ I + F F +
Sbjct: 2207 YEAKSLACGGNIYIHNADSTGYVTSPNHPDHYPQHADCIWLIAAPPGKLIRLQFEGQFSI 2266
Query: 623 EDDPACLADYVEIYDSYDDVHGFVGRYCGAELPEDIISTGNVMTLKF 763
E P C ++Y+E+ D D + ++CG LP +S+G VM L+F
Sbjct: 2267 EVTPNCTSNYLELRDGADSNAPILSKFCGTSLPISQLSSGEVMYLRF 2313
Score = 57.8 bits (138), Expect = 1e-08
Identities = 28/79 (35%), Positives = 43/79 (54%)
Frame = +2
Query: 527 FPNEYDDNQICYWHIRLKYGQRIHVSFLNFDLEDDPACLADYVEIYDSYDDVHGFVGRYC 706
+PN Y NQ C W I+ G ++ +FL F+LE C DY+E+YD +GR+C
Sbjct: 1293 YPNPYSVNQRCNWTIQATTGNTVNYTFLAFELEYYTNCSTDYLELYDGPQR----MGRFC 1348
Query: 707 GAELPEDIISTGNVMTLKF 763
G ++P +TG+ + F
Sbjct: 1349 GTDIPPSGSTTGSKFHVLF 1367
Score = 57.0 bits (136), Expect = 2e-08
Identities = 33/98 (33%), Positives = 52/98 (53%), Gaps = 2/98 (2%)
Frame = +2
Query: 479 CGGVFTDPKRIFKSPGFPNEYDDNQICYWHIRLKYGQRIHVSFLNFDLEDDPACLADYVE 658
CGG T + I +SP +PN Y ++C W IR Q + ++F FD+ C DYVE
Sbjct: 813 CGGELTG-EGIIRSPFYPNVYPGERVCVWTIRQPQSQVVLLNFTAFDMGGSAHCDTDYVE 871
Query: 659 IYDSYDDVHGFV--GRYCGAELPEDIISTGNVMTLKFL 766
+ S + G + ++CGA++P I S N + + F+
Sbjct: 872 VGSS--SILGSLKNEKHCGADIPSFITSVYNSLHVIFV 907
Score = 57.0 bits (136), Expect = 2e-08
Identities = 29/96 (30%), Positives = 46/96 (47%), Gaps = 1/96 (1%)
Frame = +2
Query: 479 CGGVFTDPKRIFKSPGFPNEYDDNQICYWHIRLKYGQRIHVSFLNFDLEDDPACLADYVE 658
CGG SPG+P Y +N C W I G+ + VSF ++D C+ +Y+
Sbjct: 3508 CGGTLYGDSGSVTSPGYPGTYPNNTHCEWAILAPAGRPVTVSFYFISIDDPGECVQNYLL 3567
Query: 659 IYDSYDDVHGFVGRYCGAELP-EDIISTGNVMTLKF 763
+YD D G YCGA+ +++ + + +KF
Sbjct: 3568 LYDGPDANSPSSGPYCGADTDIAPFVASSHCVFIKF 3603
Score = 55.8 bits (133), Expect = 5e-08
Identities = 28/96 (29%), Positives = 43/96 (44%)
Frame = +2
Query: 476 ECGGVFTDPKRIFKSPGFPNEYDDNQICYWHIRLKYGQRIHVSFLNFDLEDDPACLADYV 655
+CGG+ + SP +P YD C W + G I+++F +FD+E C D V
Sbjct: 2685 DCGGIQIGDSGVISSPNYPAAYDSLTHCSWLLEAPQGHTINLTFSDFDVEAHENCAWDSV 2744
Query: 656 EIYDSYDDVHGFVGRYCGAELPEDIISTGNVMTLKF 763
+ + +G YCG P I S N + + F
Sbjct: 2745 TVRNGGSPGSPIIGHYCGILNPGTIQSGSNQLVVIF 2780
Score = 54.7 bits (130), Expect = 1e-07
Identities = 32/111 (28%), Positives = 46/111 (41%)
Frame = +2
Query: 431 RSERWDAYCYNLHAKECGGVFTDPKRIFKSPGFPNEYDDNQICYWHIRLKYGQRIHVSFL 610
RSER + ECGG+ T KSPG+P +Y + C W + I +F
Sbjct: 571 RSERGFTIRWETQLPECGGMLTGTYGSIKSPGYPGKYPPGRDCVWRVITSPDLLITFTFG 630
Query: 611 NFDLEDDPACLADYVEIYDSYDDVHGFVGRYCGAELPEDIISTGNVMTLKF 763
LE C DY+EI D +G++C + +TG + F
Sbjct: 631 TLSLEHHDDCSKDYLEIRDGPLHQDPVLGKFCTTLSAPPLQTTGPFARIHF 681
Score = 53.5 bits (127), Expect = 3e-07
Identities = 25/83 (30%), Positives = 42/83 (50%)
Frame = +2
Query: 515 KSPGFPNEYDDNQICYWHIRLKYGQRIHVSFLNFDLEDDPACLADYVEIYDSYDDVHGFV 694
+SPG+P++Y N C + I + F +F +ED C D++E+ + + +
Sbjct: 3404 RSPGWPSDYASNVDCTTVLTAPDNHTISLFFHSFGIEDSSGCTHDFLEVRNGSESSSPLL 3463
Query: 695 GRYCGAELPEDIISTGNVMTLKF 763
G YCG LP I S + + L+F
Sbjct: 3464 GTYCGTLLPNPIFSQSHELYLRF 3486
Score = 51.6 bits (122), Expect = 1e-06
Identities = 26/105 (24%), Positives = 52/105 (49%), Gaps = 2/105 (1%)
Frame = +2
Query: 443 WDAYCYNLHAKECGGVFTDPKRIFK--SPGFPNEYDDNQICYWHIRLKYGQRIHVSFLNF 616
W + ++ + CG + F SP +D N C+W I + G+ + ++F F
Sbjct: 459 WTGFLCHIPQEVCGESLSGMNGSFSFVSPDVAYAHDIN--CFWVIHTEEGKVLRITFTFF 516
Query: 617 DLEDDPACLADYVEIYDSYDDVHGFVGRYCGAELPEDIISTGNVM 751
LE C ++++I+D +GR+CG+ P++++S+ N +
Sbjct: 517 QLEPTNNCPHEFLQIHDGDSSAAHQLGRFCGSSPPQELLSSDNAL 561
Score = 51.6 bits (122), Expect = 1e-06
Identities = 33/107 (30%), Positives = 51/107 (47%), Gaps = 9/107 (8%)
Frame = +2
Query: 473 KECGGVFTDPKRIFKSPGFPNEYDDNQICYWHIRLKYGQRIHVSFLN-FD-LEDDPAC-L 643
K CGG + I SP +P Y N C WH++++ G I V F F L D +C
Sbjct: 2087 KSCGGYLHADRGIITSPRYPETYTPNLNCSWHVQVQSGLTIAVHFEQPFQILNRDSSCNQ 2146
Query: 644 ADYVEIYDSYD------DVHGFVGRYCGAELPEDIISTGNVMTLKFL 766
DY+ + + D HG GR+CG+ + ++ N M ++F+
Sbjct: 2147 GDYLVLKNGPDLSSPPLGPHGGNGRFCGSHPSSTLFTSDNQMFVQFI 2193
Score = 50.4 bits (119), Expect = 2e-06
Identities = 27/82 (32%), Positives = 39/82 (47%)
Frame = +2
Query: 518 SPGFPNEYDDNQICYWHIRLKYGQRIHVSFLNFDLEDDPACLADYVEIYDSYDDVHGFVG 697
SP +P Y N W + ++ Q IH L D+E C D ++IYD VG
Sbjct: 1862 SPLWPGNYPHNSNYQWIVNVEESQVIHARILEMDMEGTLNCYYDKLKIYDGAGIHSRLVG 1921
Query: 698 RYCGAELPEDIISTGNVMTLKF 763
YCG + + STG+ +T +F
Sbjct: 1922 TYCGTQ-TDSFSSTGSSLTFQF 1942
Score = 49.3 bits (116), Expect = 5e-06
Identities = 29/97 (29%), Positives = 43/97 (44%), Gaps = 2/97 (2%)
Frame = +2
Query: 479 CGGVFT--DPKRIFKSPGFPNEYDDNQICYWHIRLKYGQRIHVSFLNFDLEDDPACLADY 652
CGG D SPG+P Y + C W I+ + ++ L+ D+E C D
Sbjct: 1975 CGGFLQTGDTPVFLYSPGWPESYSNGANCMWLIQAP-DSTVELNILSLDIESHSTCSYDK 2033
Query: 653 VEIYDSYDDVHGFVGRYCGAELPEDIISTGNVMTLKF 763
+ I D + + + CG E+P I STG M + F
Sbjct: 2034 LVIRDGDNSMAQELAVLCGREVPGPIRSTGEYMVIHF 2070
>ref|XP_001788250.1| PREDICTED: bone morphogenetic protein 1-like, partial [Bos taurus].
Length = 1051
Score = 78.6 bits (192), Expect = 8e-15
Identities = 33/95 (34%), Positives = 53/95 (55%)
Frame = +2
Query: 479 CGGVFTDPKRIFKSPGFPNEYDDNQICYWHIRLKYGQRIHVSFLNFDLEDDPACLADYVE 658
C T SP +P++Y + C W I G R+ ++F+ D+E P C D++E
Sbjct: 657 CDHKVTSSSGTITSPNWPDKYPSKKECTWAISSTPGHRVKLTFMEMDIESQPECAYDHLE 716
Query: 659 IYDSYDDVHGFVGRYCGAELPEDIISTGNVMTLKF 763
+YD D +GR+CG++ PE +++TGN M L+F
Sbjct: 717 VYDGRDSKAPVLGRFCGSKKPEPVLATGNRMFLRF 751
Score = 73.9 bits (180), Expect = 2e-13
Identities = 35/100 (35%), Positives = 57/100 (57%), Gaps = 4/100 (4%)
Frame = +2
Query: 479 CGGVFTDPKRIFKSPGFPNEYDDNQICYWHIRLKYGQRIHV----SFLNFDLEDDPACLA 646
CGG +SP +P++Y +++C W I++ G HV F +F++E +C
Sbjct: 385 CGGDVKKDNGHIQSPNYPDDYRPSKVCVWRIQVSEG--FHVLSIKKFQSFEIERHDSCAY 442
Query: 647 DYVEIYDSYDDVHGFVGRYCGAELPEDIISTGNVMTLKFL 766
DY+E+ D + + +GRYCG E P+DI ST + + LKF+
Sbjct: 443 DYLEVRDGHSESSTLIGRYCGYEKPDDIKSTSSRLWLKFV 482
Score = 70.9 bits (172), Expect = 2e-12
Identities = 34/95 (35%), Positives = 51/95 (53%)
Frame = +2
Query: 479 CGGVFTDPKRIFKSPGFPNEYDDNQICYWHIRLKYGQRIHVSFLNFDLEDDPACLADYVE 658
CG D F SP +PN Y + C W I + G++I ++F + DL C DYVE
Sbjct: 272 CGETLQDSTGNFSSPEYPNGYSAHMHCVWRISVTPGEKIILNFTSMDLYRSRLCWYDYVE 331
Query: 659 IYDSYDDVHGFVGRYCGAELPEDIISTGNVMTLKF 763
+ D + GR+CG +LPE I+ST + + ++F
Sbjct: 332 VRDGFWRKAPLRGRFCGGKLPEPIVSTDSRLWVEF 366
Score = 65.1 bits (157), Expect = 9e-11
Identities = 34/104 (32%), Positives = 48/104 (46%)
Frame = +2
Query: 452 YCYNLHAKECGGVFTDPKRIFKSPGFPNEYDDNQICYWHIRLKYGQRIHVSFLNFDLEDD 631
+ N CGG T SPG+P EY N+ C W + RI + F F+ E +
Sbjct: 492 FAVNFFKAACGGFLTKLNGSITSPGWPKEYPPNKNCIWQLVAPTQYRISLQFDFFETEGN 551
Query: 632 PACLADYVEIYDSYDDVHGFVGRYCGAELPEDIISTGNVMTLKF 763
C D+VE+ G++CG+E PE I S N M ++F
Sbjct: 552 DVCKYDFVEVRSGLTADSKLHGKFCGSEKPEVITSQYNNMRVEF 595
Score = 56.6 bits (135), Expect = 3e-08
Identities = 40/132 (30%), Positives = 59/132 (44%), Gaps = 9/132 (6%)
Frame = +2
Query: 467 HAKECGGVF---TDPKRIFKSPGF-PNEYDDNQICYWHIRLKYGQRIHVSFLNFDLEDDP 634
H+ ECGG K ++ F N Y C W I + G + + F F++E++
Sbjct: 766 HSTECGGQVRAEVKTKDLYSHAQFGDNNYPGGVDCEWVIVAEEGYGVELVFQTFEVEEET 825
Query: 635 ACLADYVEIYDSYDDVHGFVGRYCGAELPEDIISTGNVMT-LKFLVMLP*QQEVSKSNML 811
C DY+E++D YD +GRYCG+ I+TG+ L F + SN+L
Sbjct: 826 DCGYDYMELFDGYDSTAPRLGRYCGSG-----IATGSPQRGLSFPICKVQSSTTLTSNVL 880
Query: 812 P----WTPSQKP 835
P W Q P
Sbjct: 881 PKLEMWLCFQSP 892
>ref|XP_002688581.1| PREDICTED: KIAA1926 protein-like [Bos taurus].
Length = 421
Score = 77.4 bits (189), Expect = 2e-14
Identities = 43/110 (39%), Positives = 58/110 (52%), Gaps = 12/110 (10%)
Frame = +2
Query: 167 LEQAAGVYHREARSGKYKLTYAEAKAVCEYEGGRLATYKQLEAARKIGFHVCAAGWMAKG 346
LE YH R G+YKLT+AEA+ C + G LA+ +QL AA + G C AGW+ G
Sbjct: 179 LEGVVFPYH--PRGGRYKLTFAEAQRACAEQDGILASAEQLHAAWRDGLDWCNAGWLRDG 236
Query: 347 RVGYPIVKPGPNC------------GFGKTGIIDYGVRLNRSERWDAYCY 460
V YP+ +P C G G+ +YG R N ER+DA+C+
Sbjct: 237 SVQYPVSQPREPCGGLGGAGSAGAGGGASGGVRNYGYRHNAEERYDAFCF 286
Database: RefSeq49_BP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 17,681,374
Number of sequences in database: 33,088
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33088
Number of Hits to DB: 34,965,663
Number of extensions: 865429
Number of successful extensions: 2316
Number of sequences better than 1.0e-05: 64
Number of HSP's gapped: 2235
Number of HSP's successfully gapped: 179
Length of query: 320
Length of database: 17,681,374
Length adjustment: 102
Effective length of query: 218
Effective length of database: 14,306,398
Effective search space: 3118794764
Effective search space used: 3118794764
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)
Animal-Genome cDNA 20110601C-013305
Search to RefSeqCP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-013305
(960 letters)
Database: RefSeq49_CP.fasta
33,336 sequences; 18,874,504 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_533354.2| PREDICTED: similar to Tumor necrosis factor-ind... 476 e-143
Alignment gi|XP_541851.2| PREDICTED: similar to Stabilin-1 precursor (FEE... 117 1e-26
Alignment gi|XP_547532.2| PREDICTED: similar to brain link protein-1 [Can... 82 1e-15
Alignment gi|XP_851362.1| PREDICTED: similar to Bone morphogenetic protei... 81 2e-15
Alignment gi|NP_001003148.1| cubilin precursor [Canis lupus familiaris]. 79 8e-15
Alignment gi|XP_546484.2| PREDICTED: similar to membrane frizzled-related... 75 7e-14
Alignment gi|XP_859700.1| PREDICTED: similar to membrane frizzled-related... 75 7e-14
Alignment gi|XP_859665.1| PREDICTED: similar to membrane frizzled-related... 75 7e-14
Alignment gi|XP_539791.2| PREDICTED: similar to tolloid-like 1 [Canis fam... 74 2e-13
Alignment gi|XP_859506.1| PREDICTED: similar to neuropilin 2 isoform 2 pr... 74 3e-13
>ref|XP_533354.2| PREDICTED: similar to Tumor necrosis factor-inducible protein TSG-6
precursor (TNF-stimulated gene 6 protein) [Canis
familiaris].
Length = 344
Score = 476 bits (1224), Expect(2) = e-143
Identities = 217/231 (93%), Positives = 225/231 (97%)
Frame = +2
Query: 74 EMIILIYLFVFLWEEAHGWGFKNGIFHNSIWLEQAAGVYHREARSGKYKLTYAEAKAVCE 253
+MII I LFV LWEEAHGWGF NGIFHNSIWLEQAAGVYHREARSG+Y+LTYAEAKAVCE
Sbjct: 67 DMIIFISLFVLLWEEAHGWGFNNGIFHNSIWLEQAAGVYHREARSGRYRLTYAEAKAVCE 126
Query: 254 YEGGRLATYKQLEAARKIGFHVCAAGWMAKGRVGYPIVKPGPNCGFGKTGIIDYGVRLNR 433
+EGGRLATYKQLEAARKIGFHVCAAGWMAKGRVGYPIVKPGPNCGFGKTGIIDYGVRLNR
Sbjct: 127 FEGGRLATYKQLEAARKIGFHVCAAGWMAKGRVGYPIVKPGPNCGFGKTGIIDYGVRLNR 186
Query: 434 SERWDAYCYNLHAKECGGVFTDPKRIFKSPGFPNEYDDNQICYWHIRLKYGQRIHVSFLN 613
SERWDAYCYN HAKECGGVFTDPKRIFKSPGFPNEYDDNQICYWHIR+KYGQR+H+SFL+
Sbjct: 187 SERWDAYCYNPHAKECGGVFTDPKRIFKSPGFPNEYDDNQICYWHIRVKYGQRVHLSFLD 246
Query: 614 FDLEDDPACLADYVEIYDSYDDVHGFVGRYCGAELPEDIISTGNVMTLKFL 766
FDLEDDPACLADYVEIYDSYDDVHGFVGRYCG ELPEDIISTGNVMTLKFL
Sbjct: 247 FDLEDDPACLADYVEIYDSYDDVHGFVGRYCGDELPEDIISTGNVMTLKFL 297
Score = 53.1 bits (126), Expect(2) = e-143
Identities = 25/31 (80%), Positives = 29/31 (93%)
Frame = +1
Query: 754 LEIPSDASVTAGGFQIQYVAVDPLSKTSQGK 846
L+ SDASVTAGGFQI+Y+AVDPLSK+SQGK
Sbjct: 294 LKFLSDASVTAGGFQIKYIAVDPLSKSSQGK 324
>ref|XP_541851.2| PREDICTED: similar to Stabilin-1 precursor (FEEL-1 protein) (MS-1
antigen) [Canis familiaris].
Length = 2621
Score = 117 bits (294), Expect = 1e-26
Identities = 50/104 (48%), Positives = 70/104 (67%)
Frame = +2
Query: 170 EQAAGVYHREARSGKYKLTYAEAKAVCEYEGGRLATYKQLEAARKIGFHVCAAGWMAKGR 349
E+ AGV+H +A SG+Y L ++EA+A C +G LA+ QL AA+K+GFH+C GW+A G
Sbjct: 2254 EKQAGVFHLQAPSGRYGLNFSEAEAACAAQGAVLASLPQLSAAQKLGFHLCLLGWLANGS 2313
Query: 350 VGYPIVKPGPNCGFGKTGIIDYGVRLNRSERWDAYCYNLHAKEC 481
+P+V P +CG G+ G++ G+R NRSE WDAYCY C
Sbjct: 2314 AAHPVVFPAADCGGGQVGVVSLGIRKNRSECWDAYCYREQDVAC 2357
>ref|XP_547532.2| PREDICTED: similar to brain link protein-1 [Canis familiaris].
Length = 306
Score = 81.6 bits (200), Expect = 1e-15
Identities = 49/127 (38%), Positives = 67/127 (52%), Gaps = 3/127 (2%)
Frame = +2
Query: 140 NGIFHNSIWLEQAAG--VYHREARSGKYKLTYAEAKAVCEYEGGRLATYKQLEAARKIGF 313
NGI S+ L + V+ + G+Y+ Y EAK CE + GRLATY QL A G
Sbjct: 99 NGIEDESVALTLSLEGVVFPYQPSRGRYQFNYYEAKQACEEQDGRLATYAQLYQAWTEGL 158
Query: 314 HVCAAGWMAKGRVGYPIVKPGPNC-GFGKTGIIDYGVRLNRSERWDAYCYNLHAKECGGV 490
C AGW+ +G V YP++ C G G+ GI YG R +R+DA+C+ + G V
Sbjct: 159 DWCNAGWLLEGSVRYPVLTARAPCGGRGRPGIRSYGPRDRHRDRYDAFCFT--SMTAGHV 216
Query: 491 FTDPKRI 511
F P R+
Sbjct: 217 FFVPGRL 223
Score = 55.1 bits (131), Expect = 1e-07
Identities = 30/84 (35%), Positives = 40/84 (47%), Gaps = 2/84 (2%)
Frame = +2
Query: 218 KLTYAEAKAVCEYEGGRLATYKQLEAARKI-GFHVCAAGWMAKGRVGYPIVKPGPNC-GF 391
+LT +EA A C G +A L AA K G C GW+A G V +PI P P C G
Sbjct: 222 RLTLSEAHAACRRRGATVAKVGHLYAAWKFSGLDQCDGGWLADGSVRFPITSPRPRCGGL 281
Query: 392 GKTGIIDYGVRLNRSERWDAYCYN 463
G+ +G + + YCY+
Sbjct: 282 PDPGVRSFGFPRAQQAAFGTYCYS 305
>ref|XP_851362.1| PREDICTED: similar to Bone morphogenetic protein 1 precursor
(BMP-1) (Procollagen C-proteinase) (PCP) (Mammalian
tolloid protein) (mTld) [Canis familiaris].
Length = 975
Score = 80.9 bits (198), Expect = 2e-15
Identities = 33/96 (34%), Positives = 58/96 (60%)
Frame = +2
Query: 479 CGGVFTDPKRIFKSPGFPNEYDDNQICYWHIRLKYGQRIHVSFLNFDLEDDPACLADYVE 658
CGG +SP +P++Y +++C W I++ G + ++F +F++E +C DY+E
Sbjct: 424 CGGDVKKDNGHIQSPNYPDDYRPSKVCIWRIQVSEGFHVGLTFQSFEIERHDSCAYDYLE 483
Query: 659 IYDSYDDVHGFVGRYCGAELPEDIISTGNVMTLKFL 766
+ D + + +GRYCG E P+DI ST + + LKF+
Sbjct: 484 VRDGHSETSTLIGRYCGYEKPDDIKSTSSRLWLKFV 519
Score = 75.9 bits (185), Expect = 5e-14
Identities = 32/95 (33%), Positives = 53/95 (55%)
Frame = +2
Query: 479 CGGVFTDPKRIFKSPGFPNEYDDNQICYWHIRLKYGQRIHVSFLNFDLEDDPACLADYVE 658
C T SP +P++Y + C W I G R+ ++F+ D+E P C D++E
Sbjct: 736 CDHKVTSTSGTITSPNWPDKYPSKKECTWAISSTPGHRVKLTFMEMDIESQPECAYDHLE 795
Query: 659 IYDSYDDVHGFVGRYCGAELPEDIISTGNVMTLKF 763
+YD D +GR+CG++ PE +++TG+ M L+F
Sbjct: 796 VYDGRDAKAPVLGRFCGSKKPEPVLATGSRMFLRF 830
Score = 70.9 bits (172), Expect = 2e-12
Identities = 34/95 (35%), Positives = 51/95 (53%)
Frame = +2
Query: 479 CGGVFTDPKRIFKSPGFPNEYDDNQICYWHIRLKYGQRIHVSFLNFDLEDDPACLADYVE 658
CG D F SP +PN Y + C W I + G++I ++F + DL C DYVE
Sbjct: 311 CGETLQDSTGNFSSPEYPNGYSAHMHCVWRISVTPGEKIILNFTSMDLYRSRLCWYDYVE 370
Query: 659 IYDSYDDVHGFVGRYCGAELPEDIISTGNVMTLKF 763
+ D + GR+CG +LPE I+ST + + ++F
Sbjct: 371 VRDGFWRKAPLRGRFCGGKLPEPIVSTDSRLWVEF 405
Score = 67.0 bits (162), Expect = 2e-11
Identities = 34/103 (33%), Positives = 54/103 (52%), Gaps = 4/103 (3%)
Frame = +2
Query: 467 HAKECGGVF---TDPKRIFKSPGF-PNEYDDNQICYWHIRLKYGQRIHVSFLNFDLEDDP 634
H+ ECGG K ++ F N Y C W I + G + + F F++E++
Sbjct: 845 HSTECGGQVRAEVKTKDLYSHAQFGDNNYPGGVDCEWVIVAEEGYGVELVFQTFEVEEET 904
Query: 635 ACLADYVEIYDSYDDVHGFVGRYCGAELPEDIISTGNVMTLKF 763
C DY+E++D YD +GRYCG+ PE++ S G+ + +KF
Sbjct: 905 DCGYDYMELFDGYDSTAPRLGRYCGSGPPEEVYSAGDSVLVKF 947
Score = 63.5 bits (153), Expect = 3e-10
Identities = 33/95 (34%), Positives = 46/95 (48%)
Frame = +2
Query: 479 CGGVFTDPKRIFKSPGFPNEYDDNQICYWHIRLKYGQRIHVSFLNFDLEDDPACLADYVE 658
CGG T SPG+P EY N+ C W + RI + F F+ E + C D+VE
Sbjct: 580 CGGFLTKLNGSITSPGWPKEYPPNKNCIWQLVAPTQYRISLQFDFFETEGNDVCKYDFVE 639
Query: 659 IYDSYDDVHGFVGRYCGAELPEDIISTGNVMTLKF 763
+ G++CG+E PE I S N M ++F
Sbjct: 640 VRSGLTADSKLHGKFCGSEKPEVITSQYNNMRVEF 674
>ref|NP_001003148.1| cubilin precursor [Canis lupus familiaris].
Length = 3620
Score = 78.6 bits (192), Expect = 8e-15
Identities = 40/104 (38%), Positives = 57/104 (54%), Gaps = 1/104 (0%)
Frame = +2
Query: 458 YNLHAKECGGVFTDPKRIFKSPGFPNEYDDNQICYWHIRLKYGQRIHVSFLNFDLEDDPA 637
Y + CGG F + IF SPG+P Y N C W+I G R+ +SF+ F LED
Sbjct: 1728 YAASSSACGGTFHMAEGIFNSPGYPEVYPSNVECVWNIVSSPGNRLQLSFITFQLEDSQD 1787
Query: 638 CLADYVEIYDSYDDVHGFVGRYCGAELPEDIIS-TGNVMTLKFL 766
C D+VE+ + H VGRYCG LP + S G+++ ++F+
Sbjct: 1788 CSRDFVEVREGNATGH-LVGRYCGNVLPLNYSSIVGHILWIRFV 1830
Score = 77.0 bits (188), Expect = 2e-14
Identities = 37/96 (38%), Positives = 54/96 (56%)
Frame = +2
Query: 479 CGGVFTDPKRIFKSPGFPNEYDDNQICYWHIRLKYGQRIHVSFLNFDLEDDPACLADYVE 658
CG + T+ I +SPG PN Y C WHI ++ G IH+ F F LE C DY+E
Sbjct: 928 CGEILTESTGIIQSPGHPNIYPHGINCTWHILVQPGHLIHLIFRKFHLEFHYNCTNDYLE 987
Query: 659 IYDSYDDVHGFVGRYCGAELPEDIISTGNVMTLKFL 766
+YD+ + ++GRYCG +P + S+ N + L F+
Sbjct: 988 VYDTGSNT--YLGRYCGKSIPPSLTSSTNSLKLIFV 1021
Score = 77.0 bits (188), Expect = 2e-14
Identities = 36/95 (37%), Positives = 49/95 (51%)
Frame = +2
Query: 479 CGGVFTDPKRIFKSPGFPNEYDDNQICYWHIRLKYGQRIHVSFLNFDLEDDPACLADYVE 658
CGG T P +F SP +P Y + CYW ++ +G + F +F LE P C DY+
Sbjct: 1162 CGGNITTPTGVFTSPSYPMPYYHSSECYWLLKASHGSPFELEFEDFHLEHHPNCTLDYLA 1221
Query: 659 IYDSYDDVHGFVGRYCGAELPEDIISTGNVMTLKF 763
+YD + + CG E P I STG+ M LKF
Sbjct: 1222 VYDGPSTSSHLLSQLCGNEKPPVIRSTGDSMFLKF 1256
Score = 71.6 bits (174), Expect(2) = 5e-13
Identities = 33/98 (33%), Positives = 56/98 (57%), Gaps = 1/98 (1%)
Frame = +2
Query: 476 ECGGVFTDPKRIFKSPGFPN-EYDDNQICYWHIRLKYGQRIHVSFLNFDLEDDPACLADY 652
+CGG T I +S G+P Y DN C WH++ G + + F +F L++ C D+
Sbjct: 2332 QCGGRVTGQSGIIESSGYPTLPYRDNSFCEWHLKGPSGHYLTIHFEDFHLQNSSGCEKDF 2391
Query: 653 VEIYDSYDDVHGFVGRYCGAELPEDIISTGNVMTLKFL 766
VEI++++ +GRYCG +P+ I ++ NV ++F+
Sbjct: 2392 VEIWENHTS-GNLLGRYCGNTIPDSIDTSSNVALVRFV 2428
Score = 21.2 bits (43), Expect(2) = 5e-13
Identities = 7/14 (50%), Positives = 12/14 (85%)
Frame = +1
Query: 766 SDASVTAGGFQIQY 807
+D SVTA GF++++
Sbjct: 2429 TDGSVTASGFRLRF 2442
Score = 67.4 bits (163), Expect = 2e-11
Identities = 33/85 (38%), Positives = 50/85 (58%)
Frame = +2
Query: 509 IFKSPGFPNEYDDNQICYWHIRLKYGQRIHVSFLNFDLEDDPACLADYVEIYDSYDDVHG 688
I +S +PN Y DNQ C W I+ G ++ +FL F+LE+ C DY+E+YD
Sbjct: 1287 ILESIHYPNPYSDNQRCNWTIQATTGNTVNYTFLAFELENHINCSTDYLELYDG----PR 1342
Query: 689 FVGRYCGAELPEDIISTGNVMTLKF 763
+GRYCGA++P +TG+ + + F
Sbjct: 1343 RMGRYCGADMPPTGSTTGSKLQVLF 1367
Score = 66.2 bits (160), Expect = 4e-11
Identities = 37/97 (38%), Positives = 53/97 (54%), Gaps = 2/97 (2%)
Frame = +2
Query: 479 CGGVFTDPKRIFKSPGFPNEYDDNQICYWHIRLKYGQRIHVSFLNFDLED--DPACLADY 652
C +T+ F SP FPN Y +N C + I ++ Q+I + F NF LE+ C+AD+
Sbjct: 1044 CMEDYTENSGTFTSPNFPNNYPNNWKCIYRITVETSQQIALHFTNFALEEAIGGQCVADF 1103
Query: 653 VEIYDSYDDVHGFVGRYCGAELPEDIISTGNVMTLKF 763
VEI D + +G YCG+ P IIS N + L+F
Sbjct: 1104 VEIRDGGYETSPPLGTYCGSIPPPRIISHSNKLWLQF 1140
Score = 65.5 bits (158), Expect = 7e-11
Identities = 35/101 (34%), Positives = 51/101 (50%), Gaps = 5/101 (4%)
Frame = +2
Query: 479 CGGVFTDPKRIFKSPGFPNE--YDDNQICYWHIRLKYGQRIHVSFLNFDLEDDPA---CL 643
CGG T F SP + YD N C W I + I ++F F LE A C+
Sbjct: 3154 CGGYLTGSDNTFASPDSDSNGRYDKNLNCVWFIIAPVNKLIKLTFNTFALEAQSAMQRCI 3213
Query: 644 ADYVEIYDSYDDVHGFVGRYCGAELPEDIISTGNVMTLKFL 766
DYV++YD + G +CG+ +P IS+GN +T++F+
Sbjct: 3214 YDYVKLYDGDSENANLAGTFCGSTVPAPFISSGNFLTVQFV 3254
Score = 65.1 bits (157), Expect = 9e-11
Identities = 37/98 (37%), Positives = 52/98 (53%), Gaps = 2/98 (2%)
Frame = +2
Query: 479 CGG-VFTDPKRIFKSPGFPNEYDDNQICYWHIRLKYG-QRIHVSFLNFDLEDDPACLADY 652
CGG + T+ SP FP +Y +NQ C W I+ + I +SF +F LE C D+
Sbjct: 1617 CGGHILTNSFDTISSPLFPAKYPNNQNCSWVIQAQPPFNHITLSFDHFGLESSTTCTQDF 1676
Query: 653 VEIYDSYDDVHGFVGRYCGAELPEDIISTGNVMTLKFL 766
+EI D D GRYCG +P I S + +TL+F+
Sbjct: 1677 LEILDGDYDDAPLRGRYCGHSMPHPITSFSSALTLRFV 1714
Score = 64.3 bits (155), Expect = 2e-10
Identities = 31/83 (37%), Positives = 47/83 (56%), Gaps = 1/83 (1%)
Frame = +2
Query: 518 SPGFPNEYDDNQICYWHIRLKYGQRIHVSFLN-FDLEDDPACLADYVEIYDSYDDVHGFV 694
SPG PN Y + C W I G+ I V F + F++E+ P C+++Y+E+ D D +
Sbjct: 2231 SPGHPNNYPQHADCNWLIAAPPGKLIRVQFEDQFNIEETPNCVSNYLELRDGVDSNAPLL 2290
Query: 695 GRYCGAELPEDIISTGNVMTLKF 763
+ CG LP +S+G VM L+F
Sbjct: 2291 AKLCGRSLPSSQLSSGEVMYLRF 2313
Score = 63.5 bits (153), Expect = 3e-10
Identities = 31/96 (32%), Positives = 52/96 (54%), Gaps = 1/96 (1%)
Frame = +2
Query: 479 CGGVFTDPKRIFKSPGFPNEYDDNQICYWHIRLKYGQRIHVSFLNFDLEDDPACLADYVE 658
CGG P F SP +PN ++C W I ++ G+RI ++F N LE P+C +++V
Sbjct: 2449 CGGELQGPTGTFTSPNYPNPNPHGRVCEWRIMVQEGRRITLTFNNLRLEAHPSCYSEHVT 2508
Query: 659 IYDSYDDVHGFVGRYCGA-ELPEDIISTGNVMTLKF 763
I++ + + + CG+ +I S+GN M + F
Sbjct: 2509 IFNGIRNNSPQLEKLCGSVNASSEIKSSGNTMKVVF 2544
Score = 62.8 bits (151), Expect = 5e-10
Identities = 32/98 (32%), Positives = 49/98 (50%), Gaps = 3/98 (3%)
Frame = +2
Query: 479 CGGVFTDPKRIFKSPGFPNEYDDNQICYWHIRLKYGQRIHVSFLNFDLEDDPACLADYVE 658
CGG + F SPG+PN Y N+ C W+I G I ++ +FD+E C D +E
Sbjct: 1388 CGGELSGTTGSFSSPGYPNTYPPNKECIWYITTAPGSSIQLTIHDFDVEYHARCNFDVLE 1447
Query: 659 IYDSYDDVHGFVGRYC---GAELPEDIISTGNVMTLKF 763
+Y D + + C +E P + STGN + ++F
Sbjct: 1448 VYGGPDFHSPRITQLCSQRSSENPMQVSSTGNELAIRF 1485
Score = 62.4 bits (150), Expect = 6e-10
Identities = 32/103 (31%), Positives = 54/103 (52%), Gaps = 1/103 (0%)
Frame = +2
Query: 458 YNLHAKECGGVFTDPKRIFKSPGFP-NEYDDNQICYWHIRLKYGQRIHVSFLNFDLEDDP 634
+N CGGVF + KSP + ++Y +N C + I + + + + F +FD+
Sbjct: 3027 FNYKITSCGGVFNVSTGVIKSPAYSYSDYPNNIYCLYTIVGRDDRVVQLKFSDFDVVPST 3086
Query: 635 ACLADYVEIYDSYDDVHGFVGRYCGAELPEDIISTGNVMTLKF 763
C DY+ IYD + +G++CG+ LP +I S+ + M L F
Sbjct: 3087 FCSQDYLAIYDGSNISDPLLGKFCGSNLPPNIKSSNHSMLLVF 3129
Score = 61.6 bits (148), Expect = 1e-09
Identities = 33/96 (34%), Positives = 48/96 (50%), Gaps = 1/96 (1%)
Frame = +2
Query: 479 CGGVFTDPKRIFKSPGFPNEYDDNQICYWHIRLKYGQRIHVSFLNFDLEDDPACLADYVE 658
CGG+F P SP +P+ Y N C W IR++ RI ++F +FDLE +C +
Sbjct: 1507 CGGIFQAPNGEIHSPNYPSPYRGNTDCSWVIRVERNHRILLNFTDFDLEPQDSC----IT 1562
Query: 659 IYDSYDDVHGFVGRYCG-AELPEDIISTGNVMTLKF 763
YD + CG +L I S+GN + L+F
Sbjct: 1563 AYDGLSSTTTRLASVCGRQQLTNPITSSGNSLFLRF 1598
Score = 60.8 bits (146), Expect = 2e-09
Identities = 29/96 (30%), Positives = 44/96 (45%)
Frame = +2
Query: 476 ECGGVFTDPKRIFKSPGFPNEYDDNQICYWHIRLKYGQRIHVSFLNFDLEDDPACLADYV 655
+CGG+ + SP +P YD C W + G I ++F +FD+ED C D V
Sbjct: 2685 DCGGIQLGESGVIASPNYPASYDSLTHCSWLLEAPQGFTITLTFSDFDIEDHATCAWDSV 2744
Query: 656 EIYDSYDDVHGFVGRYCGAELPEDIISTGNVMTLKF 763
+ + +G+YCG P I S N + + F
Sbjct: 2745 SVRNGGSPGSPIIGQYCGTSNPRTIQSGSNQLVVIF 2780
Score = 60.8 bits (146), Expect = 2e-09
Identities = 29/83 (34%), Positives = 43/83 (51%)
Frame = +2
Query: 515 KSPGFPNEYDDNQICYWHIRLKYGQRIHVSFLNFDLEDDPACLADYVEIYDSYDDVHGFV 694
KSPG+P+ YD+N C + I + F +F +ED C D++E+ + D
Sbjct: 3404 KSPGWPDNYDNNLDCTVILTAPQNHTISLFFHSFGIEDSSECTHDFLEVRNGSDSSSPLF 3463
Query: 695 GRYCGAELPEDIISTGNVMTLKF 763
G YCG LP+ I S N + L+F
Sbjct: 3464 GTYCGTLLPDPIFSRNNKLYLRF 3486
Score = 57.8 bits (138), Expect = 2e-08
Identities = 27/79 (34%), Positives = 39/79 (49%)
Frame = +2
Query: 479 CGGVFTDPKRIFKSPGFPNEYDDNQICYWHIRLKYGQRIHVSFLNFDLEDDPACLADYVE 658
CGG F SPG+P Y +N C W I G+ + V+F ++D C+ +Y+
Sbjct: 3508 CGGTLYGDSGSFTSPGYPGTYPNNTDCEWAIIAPAGRPVTVTFYFISIDDPGDCVQNYLI 3567
Query: 659 IYDSYDDVHGFVGRYCGAE 715
+YD D G YCGA+
Sbjct: 3568 LYDGPDANSPSFGPYCGAD 3586
Score = 54.7 bits (130), Expect = 1e-07
Identities = 31/96 (32%), Positives = 47/96 (48%)
Frame = +2
Query: 479 CGGVFTDPKRIFKSPGFPNEYDDNQICYWHIRLKYGQRIHVSFLNFDLEDDPACLADYVE 658
CGG T + + +SP +PN Y +IC W I Q + ++F F +E C DY+E
Sbjct: 813 CGGELTG-EGVIRSPFYPNVYPGERICRWTIHQPQSQVVILNFTAFGIESSAHCDTDYIE 871
Query: 659 IYDSYDDVHGFVGRYCGAELPEDIISTGNVMTLKFL 766
I S +YCG ++P I S N + + F+
Sbjct: 872 IGSSSILGSPENKKYCGTDIPLFITSVYNFLYVIFV 907
Score = 53.9 bits (128), Expect = 2e-07
Identities = 36/149 (24%), Positives = 66/149 (44%), Gaps = 5/149 (3%)
Frame = +2
Query: 320 CAAGWMAKG---RVGYPIVKPGPNCGFGKTGIIDYGVRLNRSERWDAYCYNLHAKECGGV 490
C +GW + + P N G G+ + R W + + + CGG
Sbjct: 417 CESGWAGINCTENINECLSNPCFNGGTCVDGVNAFSCECTRF--WTGFLCQIPQQVCGGS 474
Query: 491 FT--DPKRIFKSPGFPNEYDDNQICYWHIRLKYGQRIHVSFLNFDLEDDPACLADYVEIY 664
+ D + SP +D N C+W IR + + + ++F F LE C ++++I+
Sbjct: 475 LSGMDGSFSYMSPDVGYVHDVN--CFWVIRTEDRKVLRITFTFFQLESVNNCPHEFLQIH 532
Query: 665 DSYDDVHGFVGRYCGAELPEDIISTGNVM 751
D +GR+CG+ LP +++S+ N +
Sbjct: 533 DGDSSAALQLGRFCGSVLPHELLSSNNAL 561
Score = 48.5 bits (114), Expect = 9e-06
Identities = 32/113 (28%), Positives = 45/113 (39%), Gaps = 2/113 (1%)
Frame = +2
Query: 431 RSERWDAYCYNLHAKECGGVFTDPKRIFKSPGFPNEYDDNQICYWHIRLKYGQRIHVSFL 610
RS R + ECGG+ KSPG+P Y + C W + I +F
Sbjct: 571 RSGRGFTIRWETQQPECGGILMGTYGSIKSPGYPGNYPPGRDCVWQVVTSPDLLITFTFG 630
Query: 611 NFDLEDDPACLADYVEIYDS--YDDVHGFVGRYCGAELPEDIISTGNVMTLKF 763
LE C DY+EI D Y D +G++C + +TG + F
Sbjct: 631 TLSLEHHDDCSKDYLEIRDGPLYQDPS--LGKFCTTLSVPPLQTTGPFARVHF 681
>ref|XP_546484.2| PREDICTED: similar to membrane frizzled-related protein isoform 1
[Canis familiaris].
Length = 585
Score = 75.5 bits (184), Expect = 7e-14
Identities = 36/96 (37%), Positives = 52/96 (54%), Gaps = 1/96 (1%)
Frame = +2
Query: 479 CGGVFTDPKRIFKSPGFPNEYDDNQICYWHIRLKYGQRIHVSFLNFDLEDDPACLADYVE 658
CGG T + F +PG+ Y Q+C WHI + G + + F NF LE C DYV
Sbjct: 307 CGGNLTGLQGTFSAPGYLQRYPHQQLCTWHISVPAGHGLGLQFHNFSLEAQDECKLDYVA 366
Query: 659 IYDSYDD-VHGFVGRYCGAELPEDIISTGNVMTLKF 763
+Y++ D G +GR+CGAE P +IS+ + + F
Sbjct: 367 VYETSDSGALGLLGRFCGAEPPPRLISSHQHLVVLF 402
Score = 54.3 bits (129), Expect = 2e-07
Identities = 28/96 (29%), Positives = 46/96 (47%)
Frame = +2
Query: 479 CGGVFTDPKRIFKSPGFPNEYDDNQICYWHIRLKYGQRIHVSFLNFDLEDDPACLADYVE 658
CGG+ P+ F SP +P+ Y N C WHI++ Q I + +E +CL D +E
Sbjct: 150 CGGLLPGPRGFFSSPNYPDPYPPNAHCVWHIQVATDQAIQLKIEALSMESVASCLFDRLE 209
Query: 659 IYDSYDDVHGFVGRYCGAELPEDIISTGNVMTLKFL 766
I + G + R CG P + + + + + F+
Sbjct: 210 I---SPEPEGPLLRVCGRVPPPTLNTNASHLRVAFV 242
>ref|XP_859700.1| PREDICTED: similar to membrane frizzled-related protein isoform 3
[Canis familiaris].
Length = 581
Score = 75.5 bits (184), Expect = 7e-14
Identities = 36/96 (37%), Positives = 52/96 (54%), Gaps = 1/96 (1%)
Frame = +2
Query: 479 CGGVFTDPKRIFKSPGFPNEYDDNQICYWHIRLKYGQRIHVSFLNFDLEDDPACLADYVE 658
CGG T + F +PG+ Y Q+C WHI + G + + F NF LE C DYV
Sbjct: 309 CGGNLTGLQGTFSAPGYLQRYPHQQLCTWHISVPAGHGLGLQFHNFSLEAQDECKLDYVA 368
Query: 659 IYDSYDD-VHGFVGRYCGAELPEDIISTGNVMTLKF 763
+Y++ D G +GR+CGAE P +IS+ + + F
Sbjct: 369 VYETSDSGALGLLGRFCGAEPPPRLISSHQHLVVLF 404
Score = 54.3 bits (129), Expect = 2e-07
Identities = 28/96 (29%), Positives = 46/96 (47%)
Frame = +2
Query: 479 CGGVFTDPKRIFKSPGFPNEYDDNQICYWHIRLKYGQRIHVSFLNFDLEDDPACLADYVE 658
CGG+ P+ F SP +P+ Y N C WHI++ Q I + +E +CL D +E
Sbjct: 150 CGGLLPGPRGFFSSPNYPDPYPPNAHCVWHIQVATDQAIQLKIEALSMESVASCLFDRLE 209
Query: 659 IYDSYDDVHGFVGRYCGAELPEDIISTGNVMTLKFL 766
I + G + R CG P + + + + + F+
Sbjct: 210 I---SPEPEGPLLRVCGRVPPPTLNTNASHLRVAFV 242
>ref|XP_859665.1| PREDICTED: similar to membrane frizzled-related protein isoform 2
[Canis familiaris].
Length = 587
Score = 75.5 bits (184), Expect = 7e-14
Identities = 36/96 (37%), Positives = 52/96 (54%), Gaps = 1/96 (1%)
Frame = +2
Query: 479 CGGVFTDPKRIFKSPGFPNEYDDNQICYWHIRLKYGQRIHVSFLNFDLEDDPACLADYVE 658
CGG T + F +PG+ Y Q+C WHI + G + + F NF LE C DYV
Sbjct: 309 CGGNLTGLQGTFSAPGYLQRYPHQQLCTWHISVPAGHGLGLQFHNFSLEAQDECKLDYVA 368
Query: 659 IYDSYDD-VHGFVGRYCGAELPEDIISTGNVMTLKF 763
+Y++ D G +GR+CGAE P +IS+ + + F
Sbjct: 369 VYETSDSGALGLLGRFCGAEPPPRLISSHQHLVVLF 404
Score = 54.3 bits (129), Expect = 2e-07
Identities = 28/96 (29%), Positives = 46/96 (47%)
Frame = +2
Query: 479 CGGVFTDPKRIFKSPGFPNEYDDNQICYWHIRLKYGQRIHVSFLNFDLEDDPACLADYVE 658
CGG+ P+ F SP +P+ Y N C WHI++ Q I + +E +CL D +E
Sbjct: 150 CGGLLPGPRGFFSSPNYPDPYPPNAHCVWHIQVATDQAIQLKIEALSMESVASCLFDRLE 209
Query: 659 IYDSYDDVHGFVGRYCGAELPEDIISTGNVMTLKFL 766
I + G + R CG P + + + + + F+
Sbjct: 210 I---SPEPEGPLLRVCGRVPPPTLNTNASHLRVAFV 242
>ref|XP_539791.2| PREDICTED: similar to tolloid-like 1 [Canis familiaris].
Length = 1045
Score = 74.3 bits (181), Expect = 2e-13
Identities = 31/97 (31%), Positives = 53/97 (54%)
Frame = +2
Query: 476 ECGGVFTDPKRIFKSPGFPNEYDDNQICYWHIRLKYGQRIHVSFLNFDLEDDPACLADYV 655
EC P SP +P++Y + C W I G RI ++F F++E C D++
Sbjct: 805 ECEQKIHSPSGFITSPNWPDKYPSRKECTWEISATPGHRIKLAFSEFEIEQHQECAYDHL 864
Query: 656 EIYDSYDDVHGFVGRYCGAELPEDIISTGNVMTLKFL 766
E++D + +GR CG ++PE +++TGN M ++F+
Sbjct: 865 EVFDGETEKSPILGRLCGNKIPEPLLATGNKMFVRFI 901
Score = 73.9 bits (180), Expect = 2e-13
Identities = 36/95 (37%), Positives = 50/95 (52%)
Frame = +2
Query: 479 CGGVFTDPKRIFKSPGFPNEYDDNQICYWHIRLKYGQRIHVSFLNFDLEDDPACLADYVE 658
CGG+ T +PG+P EY N+ C W + RI + F F+LE + C DYVE
Sbjct: 650 CGGLLTKLNGTITTPGWPKEYPPNKNCVWQVVAPTQYRISMKFEFFELEGNEVCKYDYVE 709
Query: 659 IYDSYDDVHGFVGRYCGAELPEDIISTGNVMTLKF 763
I+ G++CGAE+PE I S N M ++F
Sbjct: 710 IWSGLSSESKLHGKFCGAEVPEVITSQFNNMRIEF 744
Score = 71.2 bits (173), Expect = 1e-12
Identities = 33/95 (34%), Positives = 49/95 (51%)
Frame = +2
Query: 479 CGGVFTDPKRIFKSPGFPNEYDDNQICYWHIRLKYGQRIHVSFLNFDLEDDPACLADYVE 658
CG + SPGFPN Y C W + + G++I ++F DL C DY+E
Sbjct: 381 CGETLQESNGNLSSPGFPNGYPSYTHCIWRVSVTPGEKIVLNFTTMDLYKSSLCWYDYIE 440
Query: 659 IYDSYDDVHGFVGRYCGAELPEDIISTGNVMTLKF 763
+ D Y +GR+CG +LPE + ST + M ++F
Sbjct: 441 VRDGYWRKSPLLGRFCGDKLPEVLASTDSRMWIEF 475
Score = 70.1 bits (170), Expect = 3e-12
Identities = 31/96 (32%), Positives = 52/96 (54%)
Frame = +2
Query: 479 CGGVFTDPKRIFKSPGFPNEYDDNQICYWHIRLKYGQRIHVSFLNFDLEDDPACLADYVE 658
CGG + +SP +P++Y + C W I + + ++F F++E C DY+E
Sbjct: 494 CGGEIRKHEGQIQSPNYPDDYRPMKECVWKITVSEDYYVGLTFQAFEIERHDNCAYDYLE 553
Query: 659 IYDSYDDVHGFVGRYCGAELPEDIISTGNVMTLKFL 766
+ D + +GR+CG + PEDI ST N + +KF+
Sbjct: 554 VRDGTSENSPLIGRFCGYDKPEDIRSTSNTLWMKFV 589
Score = 65.1 bits (157), Expect = 9e-11
Identities = 34/103 (33%), Positives = 55/103 (53%), Gaps = 4/103 (3%)
Frame = +2
Query: 467 HAKECGGVFT---DPKRIFKSPGF-PNEYDDNQICYWHIRLKYGQRIHVSFLNFDLEDDP 634
H+ ECGG P+ ++ F N Y C W + + G R+ +SF F++E++
Sbjct: 915 HSTECGGRLKAELKPRDLYSHAQFGDNNYPGQVDCEWLLVSERGFRLELSFQIFEVEEEA 974
Query: 635 ACLADYVEIYDSYDDVHGFVGRYCGAELPEDIISTGNVMTLKF 763
C DYVE++D D +GR+CG+ PE+I S G+ + + F
Sbjct: 975 DCGYDYVELFDGLDSTAVGLGRFCGSGPPEEIYSIGDAVLIHF 1017
>ref|XP_859506.1| PREDICTED: similar to neuropilin 2 isoform 2 precursor isoform 4
[Canis familiaris].
Length = 926
Score = 73.6 bits (179), Expect = 3e-13
Identities = 36/104 (34%), Positives = 56/104 (53%), Gaps = 6/104 (5%)
Frame = +2
Query: 470 AKECGGVFTDPKRIFKSPGFPNEYDDNQICYWHIRLKYGQRIHVSFLNFDLEDDPA---- 637
+++C FT P +SPGFP +Y N C + I K I + FL FDLE DP
Sbjct: 146 SEDCSKNFTSPNGTIESPGFPEKYPHNLDCTFTILAKPKMEIILQFLTFDLEHDPLQVGE 205
Query: 638 --CLADYVEIYDSYDDVHGFVGRYCGAELPEDIISTGNVMTLKF 763
C D+++I+D V +G+YCG + P ++ S+ +++L F
Sbjct: 206 GDCKYDWLDIWDGIPHVGPLIGKYCGTKTPSELRSSTGILSLTF 249
Score = 53.9 bits (128), Expect = 2e-07
Identities = 32/98 (32%), Positives = 54/98 (55%), Gaps = 3/98 (3%)
Frame = +2
Query: 479 CGGVFTDPKRIF-KSPGFPNEYDDNQICYWHIRL-KYGQRIHVSFL-NFDLEDDPACLAD 649
CGG + SPG+P +Y +Q C W + + Q+I ++F +F++E C D
Sbjct: 28 CGGRLNSKDAGYITSPGYPQDYPSHQNCEWIVYAPEPNQKIVLNFNPHFEIEKHD-CKYD 86
Query: 650 YVEIYDSYDDVHGFVGRYCGAELPEDIISTGNVMTLKF 763
++EI D + +G++CG P IIS+G+V+ +KF
Sbjct: 87 FIEIRDGDSESADLLGKHCGNIAPPTIISSGSVLYIKF 124
Database: RefSeq49_CP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,874,504
Number of sequences in database: 33,336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33336
Number of Hits to DB: 36,551,298
Number of extensions: 896812
Number of successful extensions: 2221
Number of sequences better than 1.0e-05: 47
Number of HSP's gapped: 2171
Number of HSP's successfully gapped: 118
Length of query: 320
Length of database: 18,874,504
Length adjustment: 103
Effective length of query: 217
Effective length of database: 15,440,896
Effective search space: 3350674432
Effective search space used: 3350674432
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)
Search to RefSeqSP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-013305
(960 letters)
Database: RefSeq49_SP.fasta
24,897 sequences; 11,343,932 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_003359767.1| PREDICTED: tumor necrosis factor-inducible g... 498 e-151
Alignment gi|NP_001153079.1| tumor necrosis factor-inducible gene 6 prote... 489 e-148
Alignment gi|XP_003132304.1| PREDICTED: stabilin-1-like [Sus scrofa]. 115 5e-26
Alignment gi|XP_003355706.1| PREDICTED: stabilin-2 [Sus scrofa]. 110 9e-25
Alignment gi|XP_003355190.1| PREDICTED: hyaluronan and proteoglycan link ... 81 1e-15
Alignment gi|XP_003359075.1| PREDICTED: bone morphogenetic protein 1 isof... 80 2e-15
Alignment gi|XP_001927808.2| PREDICTED: bone morphogenetic protein 1 isof... 80 2e-15
Alignment gi|XP_003130768.2| PREDICTED: cubilin-like [Sus scrofa]. 78 6e-15
Alignment gi|XP_003357786.1| PREDICTED: cubilin-like [Sus scrofa]. 75 7e-14
Alignment gi|XP_003129040.2| PREDICTED: tolloid-like protein 1 [Sus scrof... 75 7e-14
>ref|XP_003359767.1| PREDICTED: tumor necrosis factor-inducible gene 6 protein-like [Sus
scrofa].
Length = 277
Score = 498 bits (1281), Expect(2) = e-151
Identities = 230/230 (100%), Positives = 230/230 (100%)
Frame = +2
Query: 77 MIILIYLFVFLWEEAHGWGFKNGIFHNSIWLEQAAGVYHREARSGKYKLTYAEAKAVCEY 256
MIILIYLFVFLWEEAHGWGFKNGIFHNSIWLEQAAGVYHREARSGKYKLTYAEAKAVCEY
Sbjct: 1 MIILIYLFVFLWEEAHGWGFKNGIFHNSIWLEQAAGVYHREARSGKYKLTYAEAKAVCEY 60
Query: 257 EGGRLATYKQLEAARKIGFHVCAAGWMAKGRVGYPIVKPGPNCGFGKTGIIDYGVRLNRS 436
EGGRLATYKQLEAARKIGFHVCAAGWMAKGRVGYPIVKPGPNCGFGKTGIIDYGVRLNRS
Sbjct: 61 EGGRLATYKQLEAARKIGFHVCAAGWMAKGRVGYPIVKPGPNCGFGKTGIIDYGVRLNRS 120
Query: 437 ERWDAYCYNLHAKECGGVFTDPKRIFKSPGFPNEYDDNQICYWHIRLKYGQRIHVSFLNF 616
ERWDAYCYNLHAKECGGVFTDPKRIFKSPGFPNEYDDNQICYWHIRLKYGQRIHVSFLNF
Sbjct: 121 ERWDAYCYNLHAKECGGVFTDPKRIFKSPGFPNEYDDNQICYWHIRLKYGQRIHVSFLNF 180
Query: 617 DLEDDPACLADYVEIYDSYDDVHGFVGRYCGAELPEDIISTGNVMTLKFL 766
DLEDDPACLADYVEIYDSYDDVHGFVGRYCGAELPEDIISTGNVMTLKFL
Sbjct: 181 DLEDDPACLADYVEIYDSYDDVHGFVGRYCGAELPEDIISTGNVMTLKFL 230
Score = 55.1 bits (131), Expect(2) = e-151
Identities = 27/31 (87%), Positives = 29/31 (93%)
Frame = +1
Query: 754 LEIPSDASVTAGGFQIQYVAVDPLSKTSQGK 846
L+ SDASVTAGGFQI+YVAVDPLSKTSQGK
Sbjct: 227 LKFLSDASVTAGGFQIKYVAVDPLSKTSQGK 257
>ref|NP_001153079.1| tumor necrosis factor-inducible gene 6 protein [Sus scrofa].
Length = 277
Score = 489 bits (1258), Expect(2) = e-148
Identities = 227/230 (98%), Positives = 228/230 (99%)
Frame = +2
Query: 77 MIILIYLFVFLWEEAHGWGFKNGIFHNSIWLEQAAGVYHREARSGKYKLTYAEAKAVCEY 256
MIILIYLFVFLWEEAHGWGFKNGIFHNSIWLEQAAGVY REARSGKYKLTYAEAKAVCEY
Sbjct: 1 MIILIYLFVFLWEEAHGWGFKNGIFHNSIWLEQAAGVYLREARSGKYKLTYAEAKAVCEY 60
Query: 257 EGGRLATYKQLEAARKIGFHVCAAGWMAKGRVGYPIVKPGPNCGFGKTGIIDYGVRLNRS 436
EGGRLATYKQLEAARKIGFHVCAAGWMAKGRVGYPIVKPGPNCGFGKTGIIDYGVRLNRS
Sbjct: 61 EGGRLATYKQLEAARKIGFHVCAAGWMAKGRVGYPIVKPGPNCGFGKTGIIDYGVRLNRS 120
Query: 437 ERWDAYCYNLHAKECGGVFTDPKRIFKSPGFPNEYDDNQICYWHIRLKYGQRIHVSFLNF 616
ERWDAYCYN HAKECGGVFTDPKRIFKSPGFPNEYDDNQICYWHIRLKYGQRIHVSFL+F
Sbjct: 121 ERWDAYCYNPHAKECGGVFTDPKRIFKSPGFPNEYDDNQICYWHIRLKYGQRIHVSFLDF 180
Query: 617 DLEDDPACLADYVEIYDSYDDVHGFVGRYCGAELPEDIISTGNVMTLKFL 766
DLEDDPACLADYVEIYDSYDDVHGFVGRYCGAELPEDIISTGNVMTLKFL
Sbjct: 181 DLEDDPACLADYVEIYDSYDDVHGFVGRYCGAELPEDIISTGNVMTLKFL 230
Score = 55.1 bits (131), Expect(2) = e-148
Identities = 27/31 (87%), Positives = 29/31 (93%)
Frame = +1
Query: 754 LEIPSDASVTAGGFQIQYVAVDPLSKTSQGK 846
L+ SDASVTAGGFQI+YVAVDPLSKTSQGK
Sbjct: 227 LKFLSDASVTAGGFQIKYVAVDPLSKTSQGK 257
>ref|XP_003132304.1| PREDICTED: stabilin-1-like [Sus scrofa].
Length = 2400
Score = 115 bits (287), Expect = 5e-26
Identities = 49/104 (47%), Positives = 68/104 (65%)
Frame = +2
Query: 170 EQAAGVYHREARSGKYKLTYAEAKAVCEYEGGRLATYKQLEAARKIGFHVCAAGWMAKGR 349
E+ AGV+H +A SG Y L ++EA+A C +G LA+ QL AA+K+GFH+C GW+A G
Sbjct: 2033 EKRAGVFHLQASSGPYGLNFSEAEAACGAQGAVLASLPQLSAAQKLGFHLCLVGWLANGS 2092
Query: 350 VGYPIVKPGPNCGFGKTGIIDYGVRLNRSERWDAYCYNLHAKEC 481
+P+ P +CG G+ G++ G R+N SERWDAYCY C
Sbjct: 2093 AAHPVTFPTADCGEGQVGVVSLGARVNLSERWDAYCYREQDVAC 2136
>ref|XP_003355706.1| PREDICTED: stabilin-2 [Sus scrofa].
Length = 2360
Score = 110 bits (276), Expect = 9e-25
Identities = 48/100 (48%), Positives = 63/100 (63%)
Frame = +2
Query: 182 GVYHREARSGKYKLTYAEAKAVCEYEGGRLATYKQLEAARKIGFHVCAAGWMAKGRVGYP 361
GV+H + G+YKLT+ +AK C E +ATY QL A+K +H+C+AGW+ GRVGYP
Sbjct: 1856 GVFHLRSPLGQYKLTFDKAKEACAKEAATVATYNQLAYAQKAKYHLCSAGWLDGGRVGYP 1915
Query: 362 IVKPGPNCGFGKTGIIDYGVRLNRSERWDAYCYNLHAKEC 481
NCG G GI+DYG R N+SE WD +CY + C
Sbjct: 1916 TSYASQNCGSGVVGIVDYGPRNNKSEMWDVFCYRMKDVNC 1955
>ref|XP_003355190.1| PREDICTED: hyaluronan and proteoglycan link protein 2-like [Sus
scrofa].
Length = 200
Score = 80.9 bits (198), Expect = 1e-15
Identities = 44/110 (40%), Positives = 61/110 (55%), Gaps = 1/110 (0%)
Frame = +2
Query: 185 VYHREARSGKYKLTYAEAKAVCEYEGGRLATYKQLEAARKIGFHVCAAGWMAKGRVGYPI 364
V+ + G+Y+ Y EAK CE + GRLATY QL A G C AGW+ +G V YP+
Sbjct: 10 VFPYQPSRGRYQFNYYEAKQACEEQDGRLATYSQLYQAWTEGLDWCNAGWLLEGSVRYPV 69
Query: 365 VKPGPNC-GFGKTGIIDYGVRLNRSERWDAYCYNLHAKECGGVFTDPKRI 511
+ C G G+ GI YG R + +R+DA+C+ + G VF P R+
Sbjct: 70 LTARAPCGGRGRPGIRSYGPRDRKRDRYDAFCFT--SALTGHVFFVPGRL 117
Score = 55.1 bits (131), Expect = 6e-08
Identities = 30/84 (35%), Positives = 40/84 (47%), Gaps = 2/84 (2%)
Frame = +2
Query: 218 KLTYAEAKAVCEYEGGRLATYKQLEAARKI-GFHVCAAGWMAKGRVGYPIVKPGPNC-GF 391
+LT +EA A C G +A L AA K G C GW+A G V +PI P P C G
Sbjct: 116 RLTLSEAHAACRRRGATVAKVGHLYAAWKFSGLDQCDGGWLADGSVRFPITTPRPRCGGL 175
Query: 392 GKTGIIDYGVRLNRSERWDAYCYN 463
G+ +G + + YCY+
Sbjct: 176 PDPGVRSFGFPRPQQAAYGTYCYS 199
>ref|XP_003359075.1| PREDICTED: bone morphogenetic protein 1 isoform 2 [Sus scrofa].
Length = 737
Score = 80.1 bits (196), Expect = 2e-15
Identities = 33/96 (34%), Positives = 58/96 (60%)
Frame = +2
Query: 479 CGGVFTDPKRIFKSPGFPNEYDDNQICYWHIRLKYGQRIHVSFLNFDLEDDPACLADYVE 658
CGG +SP +P++Y +++C W I++ G + ++F +F++E +C DY+E
Sbjct: 442 CGGDVKKDNGHIQSPNYPDDYRPSKVCIWRIQVSEGFHVGLTFQSFEIERHDSCAYDYLE 501
Query: 659 IYDSYDDVHGFVGRYCGAELPEDIISTGNVMTLKFL 766
+ D + + +GRYCG E P+DI ST + + LKF+
Sbjct: 502 VRDGHSESSTLIGRYCGYEKPDDIKSTSSRLWLKFV 537
Score = 70.9 bits (172), Expect = 1e-12
Identities = 34/95 (35%), Positives = 51/95 (53%)
Frame = +2
Query: 479 CGGVFTDPKRIFKSPGFPNEYDDNQICYWHIRLKYGQRIHVSFLNFDLEDDPACLADYVE 658
CG D F SP +PN Y + C W I + G++I ++F + DL C DYVE
Sbjct: 329 CGETLQDSTGNFSSPEYPNGYSAHMHCVWRISVTPGEKIILNFTSMDLYRSRLCWYDYVE 388
Query: 659 IYDSYDDVHGFVGRYCGAELPEDIISTGNVMTLKF 763
+ D + GR+CG +LPE I+ST + + ++F
Sbjct: 389 VRDGFWRKAPLRGRFCGGKLPEPIVSTDSRLWVEF 423
Score = 63.5 bits (153), Expect = 2e-10
Identities = 33/95 (34%), Positives = 46/95 (48%)
Frame = +2
Query: 479 CGGVFTDPKRIFKSPGFPNEYDDNQICYWHIRLKYGQRIHVSFLNFDLEDDPACLADYVE 658
CGG T SPG+P EY N+ C W + RI + F F+ E + C D+VE
Sbjct: 598 CGGFLTKLNGSITSPGWPKEYPPNKNCIWQLVAPTQYRISLQFDFFETEGNDVCKYDFVE 657
Query: 659 IYDSYDDVHGFVGRYCGAELPEDIISTGNVMTLKF 763
+ G++CG+E PE I S N M ++F
Sbjct: 658 VRSGLTADSKLHGKFCGSEKPEVITSQYNNMRVEF 692
>ref|XP_001927808.2| PREDICTED: bone morphogenetic protein 1 isoform 1 [Sus scrofa].
Length = 993
Score = 80.1 bits (196), Expect = 2e-15
Identities = 33/96 (34%), Positives = 58/96 (60%)
Frame = +2
Query: 479 CGGVFTDPKRIFKSPGFPNEYDDNQICYWHIRLKYGQRIHVSFLNFDLEDDPACLADYVE 658
CGG +SP +P++Y +++C W I++ G + ++F +F++E +C DY+E
Sbjct: 442 CGGDVKKDNGHIQSPNYPDDYRPSKVCIWRIQVSEGFHVGLTFQSFEIERHDSCAYDYLE 501
Query: 659 IYDSYDDVHGFVGRYCGAELPEDIISTGNVMTLKFL 766
+ D + + +GRYCG E P+DI ST + + LKF+
Sbjct: 502 VRDGHSESSTLIGRYCGYEKPDDIKSTSSRLWLKFV 537
Score = 76.6 bits (187), Expect = 2e-14
Identities = 33/95 (34%), Positives = 53/95 (55%)
Frame = +2
Query: 479 CGGVFTDPKRIFKSPGFPNEYDDNQICYWHIRLKYGQRIHVSFLNFDLEDDPACLADYVE 658
C T SP +P++Y + C W I G R+ ++FL D+E P C D++E
Sbjct: 754 CDHKVTSTSGTITSPNWPDKYPSKKECTWAISSTPGHRVKLTFLEMDIESQPECAYDHLE 813
Query: 659 IYDSYDDVHGFVGRYCGAELPEDIISTGNVMTLKF 763
+YD D +GR+CG++ PE +++TG+ M L+F
Sbjct: 814 VYDGRDAKAPVLGRFCGSKKPEPVLATGSRMFLRF 848
Score = 70.9 bits (172), Expect = 1e-12
Identities = 34/95 (35%), Positives = 51/95 (53%)
Frame = +2
Query: 479 CGGVFTDPKRIFKSPGFPNEYDDNQICYWHIRLKYGQRIHVSFLNFDLEDDPACLADYVE 658
CG D F SP +PN Y + C W I + G++I ++F + DL C DYVE
Sbjct: 329 CGETLQDSTGNFSSPEYPNGYSAHMHCVWRISVTPGEKIILNFTSMDLYRSRLCWYDYVE 388
Query: 659 IYDSYDDVHGFVGRYCGAELPEDIISTGNVMTLKF 763
+ D + GR+CG +LPE I+ST + + ++F
Sbjct: 389 VRDGFWRKAPLRGRFCGGKLPEPIVSTDSRLWVEF 423
Score = 67.0 bits (162), Expect = 1e-11
Identities = 34/103 (33%), Positives = 54/103 (52%), Gaps = 4/103 (3%)
Frame = +2
Query: 467 HAKECGGVF---TDPKRIFKSPGF-PNEYDDNQICYWHIRLKYGQRIHVSFLNFDLEDDP 634
H+ ECGG K ++ F N Y C W I + G + + F F++E++
Sbjct: 863 HSTECGGQVRAEVKTKDLYSHAQFGDNNYPGGVDCEWVIVAEEGYGVELVFQTFEVEEET 922
Query: 635 ACLADYVEIYDSYDDVHGFVGRYCGAELPEDIISTGNVMTLKF 763
C DY+E++D YD +GRYCG+ PE++ S G+ + +KF
Sbjct: 923 DCGYDYMELFDGYDSTAPRLGRYCGSGPPEEVYSAGDSVLVKF 965
Score = 63.5 bits (153), Expect = 2e-10
Identities = 33/95 (34%), Positives = 46/95 (48%)
Frame = +2
Query: 479 CGGVFTDPKRIFKSPGFPNEYDDNQICYWHIRLKYGQRIHVSFLNFDLEDDPACLADYVE 658
CGG T SPG+P EY N+ C W + RI + F F+ E + C D+VE
Sbjct: 598 CGGFLTKLNGSITSPGWPKEYPPNKNCIWQLVAPTQYRISLQFDFFETEGNDVCKYDFVE 657
Query: 659 IYDSYDDVHGFVGRYCGAELPEDIISTGNVMTLKF 763
+ G++CG+E PE I S N M ++F
Sbjct: 658 VRSGLTADSKLHGKFCGSEKPEVITSQYNNMRVEF 692
>ref|XP_003130768.2| PREDICTED: cubilin-like [Sus scrofa].
Length = 642
Score = 78.2 bits (191), Expect = 6e-15
Identities = 38/98 (38%), Positives = 52/98 (53%)
Frame = +2
Query: 473 KECGGVFTDPKRIFKSPGFPNEYDDNQICYWHIRLKYGQRIHVSFLNFDLEDDPACLADY 652
+ CG + T+ I +SPG PN Y C WHI ++ G IH+ F LE C DY
Sbjct: 305 ESCGEILTESSGIIQSPGHPNIYPHGVNCTWHILVQPGHLIHLEIRQFHLEFHYNCTRDY 364
Query: 653 VEIYDSYDDVHGFVGRYCGAELPEDIISTGNVMTLKFL 766
+EIYD+ D +GRYCG +P + S N + L F+
Sbjct: 365 LEIYDTVSDTS--LGRYCGKSIPPSLTSNTNSLKLIFV 400
Score = 74.3 bits (181), Expect = 9e-14
Identities = 35/94 (37%), Positives = 49/94 (52%)
Frame = +2
Query: 479 CGGVFTDPKRIFKSPGFPNEYDDNQICYWHIRLKYGQRIHVSFLNFDLEDDPACLADYVE 658
CGG T P F SP +P Y + C+W ++ +G + F +F LE P C DY++
Sbjct: 423 CGGNLTTPTGTFTSPNYPMPYYHSSECFWWLKSSHGSPFELEFNDFHLEYHPNCTLDYLD 482
Query: 659 IYDSYDDVHGFVGRYCGAELPEDIISTGNVMTLK 760
+YD + R CG E P I STG+ M+LK
Sbjct: 483 VYDGLSTSSHLLTRLCGNEKPPLIRSTGDSMSLK 516
>ref|XP_003357786.1| PREDICTED: cubilin-like [Sus scrofa].
Length = 2919
Score = 74.7 bits (182), Expect = 7e-14
Identities = 40/104 (38%), Positives = 56/104 (53%), Gaps = 1/104 (0%)
Frame = +2
Query: 458 YNLHAKECGGVFTDPKRIFKSPGFPNEYDDNQICYWHIRLKYGQRIHVSFLNFDLEDDPA 637
Y CGG+F + IF SPG+P Y N C W+I G ++ +SF+ F LED
Sbjct: 1051 YVASTSACGGIFHMAEGIFNSPGYPEVYPSNVECVWNIASSPGNQLQLSFITFQLEDSRD 1110
Query: 638 CLADYVEIYDSYDDVHGFVGRYCGAELPEDIIS-TGNVMTLKFL 766
C D+VEI + + VGRYCG LP + S G+ + +KF+
Sbjct: 1111 CSRDFVEIREG-NATGRLVGRYCGNVLPLNYSSIIGHDLWIKFV 1153
Score = 71.2 bits (173), Expect(2) = 3e-13
Identities = 39/98 (39%), Positives = 51/98 (52%), Gaps = 2/98 (2%)
Frame = +2
Query: 479 CGG-VFTDPKRIFKSPGFPNEYDDNQICYWHIRLKYG-QRIHVSFLNFDLEDDPACLADY 652
CGG + TD SP FP Y +NQ C W I+ + I +SF +F LE C D+
Sbjct: 940 CGGHILTDSFDTISSPRFPASYPNNQNCSWIIQAQPPFNHITLSFSHFGLESSSTCTRDF 999
Query: 653 VEIYDSYDDVHGFVGRYCGAELPEDIISTGNVMTLKFL 766
VEI D GRYCG+ +P I S GN + L+F+
Sbjct: 1000 VEILDGSHSDAPLRGRYCGSSMPHPITSFGNALMLRFV 1037
Score = 21.2 bits (43), Expect(2) = 3e-13
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = +1
Query: 754 LEIPSDASVTAGGFQIQYVA 813
L SD+SV GF YVA
Sbjct: 1034 LRFVSDSSVNFDGFHATYVA 1053
Score = 67.8 bits (164), Expect = 9e-12
Identities = 31/98 (31%), Positives = 57/98 (58%), Gaps = 1/98 (1%)
Frame = +2
Query: 476 ECGGVFTDPKRIFKSPGFPN-EYDDNQICYWHIRLKYGQRIHVSFLNFDLEDDPACLADY 652
+CGG T + +S G+P Y +N C W ++ G + + F +F+L++ C D+
Sbjct: 1631 QCGGTVTGQSGVIESSGYPALPYANNLFCEWRLQGLSGHYLTIHFEDFNLQNSSGCERDF 1690
Query: 653 VEIYDSYDDVHGFVGRYCGAELPEDIISTGNVMTLKFL 766
VEI++++ +GRYCG +P+ I ++GNV ++F+
Sbjct: 1691 VEIWENHTS-GNLLGRYCGNTVPDSIDTSGNVALVRFV 1727
Score = 64.3 bits (155), Expect = 9e-11
Identities = 34/101 (33%), Positives = 51/101 (50%), Gaps = 5/101 (4%)
Frame = +2
Query: 479 CGGVFTDPKRIFKSPGFPNE--YDDNQICYWHIRLKYGQRIHVSFLNFDLEDDPA---CL 643
CGG T F SP + YD N C W I + I ++F F LE + C+
Sbjct: 2453 CGGYLTGSTHTFGSPDSDSNGRYDKNLNCIWFITAPVNKLIKLTFSTFALEAATSLQRCI 2512
Query: 644 ADYVEIYDSYDDVHGFVGRYCGAELPEDIISTGNVMTLKFL 766
DYV++YD + G +CG+ +P IS+GN +T++F+
Sbjct: 2513 YDYVKLYDGDSENANLAGTFCGSTVPAPFISSGNFLTVQFV 2553
Score = 63.2 bits (152), Expect = 2e-10
Identities = 32/96 (33%), Positives = 52/96 (54%), Gaps = 1/96 (1%)
Frame = +2
Query: 479 CGGVFTDPKRIFKSPGFP-NEYDDNQICYWHIRLKYGQRIHVSFLNFDLEDDPACLADYV 655
CGG F I KSP + + Y ++ C + + ++ + I + F +FDL C DY+
Sbjct: 2333 CGGTFNLSFGIIKSPSYSYSNYPNDMHCLYTVTVRDDRVIQLKFNDFDLVPSTFCSQDYL 2392
Query: 656 EIYDSYDDVHGFVGRYCGAELPEDIISTGNVMTLKF 763
EIYD + +G++CG+ LP ++ S+ N M L F
Sbjct: 2393 EIYDGSNISDPLLGKFCGSTLPPNVKSSNNTMFLVF 2428
Score = 62.8 bits (151), Expect = 3e-10
Identities = 34/98 (34%), Positives = 48/98 (48%), Gaps = 3/98 (3%)
Frame = +2
Query: 479 CGGVFTDPKRIFKSPGFPNEYDDNQICYWHIRLKYGQRIHVSFLNFDLEDDPACLADYVE 658
CGG + F SPG+P Y N+ C W+I G I ++ +FD+E C D +E
Sbjct: 711 CGGELSGDTGTFSSPGYPVGYPANKECIWYIHSSPGSSIQLTIHDFDVEYHATCNFDVLE 770
Query: 659 IYDSYDDVHGFVGRYC---GAELPEDIISTGNVMTLKF 763
IY D + + C AE P + STGN + L+F
Sbjct: 771 IYGGPDFHSPRIAQLCVQRSAENPMQVSSTGNELALRF 808
Score = 59.7 bits (143), Expect = 2e-09
Identities = 30/95 (31%), Positives = 51/95 (53%)
Frame = +2
Query: 479 CGGVFTDPKRIFKSPGFPNEYDDNQICYWHIRLKYGQRIHVSFLNFDLEDDPACLADYVE 658
CGG+F P SP +P+ Y N C W I+++ R+ ++F +FDLE +C+ +
Sbjct: 830 CGGIFQAPSGEIHSPNYPSPYRSNTECTWLIQVEKNHRVLLNFTDFDLEPQDSCIMAFDG 889
Query: 659 IYDSYDDVHGFVGRYCGAELPEDIISTGNVMTLKF 763
+ + + G GR +L IISTG+ + ++F
Sbjct: 890 LSSATARLVGVCGR---QQLSNPIISTGSSLFVRF 921
Score = 58.9 bits (141), Expect = 4e-09
Identities = 28/96 (29%), Positives = 44/96 (45%)
Frame = +2
Query: 476 ECGGVFTDPKRIFKSPGFPNEYDDNQICYWHIRLKYGQRIHVSFLNFDLEDDPACLADYV 655
+CGG+ + SP +P YD C W + G I ++F +FD+E +C D V
Sbjct: 1984 DCGGIQIGDHGVISSPNYPASYDSLTHCSWLLEAPQGHTITLTFSDFDIEAHASCAWDSV 2043
Query: 656 EIYDSYDDVHGFVGRYCGAELPEDIISTGNVMTLKF 763
+ + +G YCG+ P I S N + + F
Sbjct: 2044 TVRNGGSPGSPIIGHYCGSSNPRTIQSGSNQLVVIF 2079
Score = 58.2 bits (139), Expect = 7e-09
Identities = 32/100 (32%), Positives = 47/100 (47%), Gaps = 5/100 (5%)
Frame = +2
Query: 479 CGGVF----TDPKRIFKSPGFPNEYDDNQICYWHIRLKYGQRIHVSFLN-FDLEDDPACL 643
CGG D SP P+ Y + C W I G+ I + F + F +E P C
Sbjct: 1513 CGGNIYIHDADSSGYVASPNHPDNYPQHADCIWVIAAPSGRPIRLEFEDQFSIEITPNCT 1572
Query: 644 ADYVEIYDSYDDVHGFVGRYCGAELPEDIISTGNVMTLKF 763
+ Y+E+ D D + ++CG LP +S+G VM L+F
Sbjct: 1573 SSYLELRDGADSNAPVLAKFCGTSLPPSQLSSGEVMYLRF 1612
Score = 57.4 bits (137), Expect = 1e-08
Identities = 36/151 (23%), Positives = 64/151 (42%), Gaps = 3/151 (1%)
Frame = +2
Query: 320 CAAGWMAKG---RVGYPIVKPGPNCGFGKTGIIDYGVRLNRSERWDAYCYNLHAKECGGV 490
C +GW + + P N G GI + R W +L + CGG
Sbjct: 110 CDSGWAGMNCTENINECLSNPCLNGGTCVDGINAFSCECTRF--WTGSLCHLPQQVCGGT 167
Query: 491 FTDPKRIFKSPGFPNEYDDNQICYWHIRLKYGQRIHVSFLNFDLEDDPACLADYVEIYDS 670
+D F Y + C+W +R + G+ + ++F F LE C ++++I+D
Sbjct: 168 MSDVSGSFSYMSPDVGYVHDVDCFWVLRTEEGKVLRITFTFFQLESVDNCPHEFLQIHDG 227
Query: 671 YDDVHGFVGRYCGAELPEDIISTGNVMTLKF 763
+GR+CG+ P +++S+ N + F
Sbjct: 228 DSPAAFPLGRFCGSSPPHELLSSDNALYFHF 258
Score = 55.1 bits (131), Expect = 6e-08
Identities = 26/79 (32%), Positives = 39/79 (49%)
Frame = +2
Query: 479 CGGVFTDPKRIFKSPGFPNEYDDNQICYWHIRLKYGQRIHVSFLNFDLEDDPACLADYVE 658
CGG + SPG+P Y ++ C W I G+ + VSF ++D C+ +Y+
Sbjct: 2807 CGGTLYGDSGLVTSPGYPGTYPNHTHCEWVIIAPGGRPVTVSFSFISIDDPGECVQNYLM 2866
Query: 659 IYDSYDDVHGFVGRYCGAE 715
+YD D G YCGA+
Sbjct: 2867 LYDGPDANSPSSGPYCGAD 2885
Score = 54.3 bits (129), Expect = 1e-07
Identities = 32/111 (28%), Positives = 47/111 (42%)
Frame = +2
Query: 431 RSERWDAYCYNLHAKECGGVFTDPKRIFKSPGFPNEYDDNQICYWHIRLKYGQRIHVSFL 610
R+ER + ECGGV T KSPG+P +Y + C W + I +F
Sbjct: 264 RNERGFTIRWETRQPECGGVLTGTYGSLKSPGYPGKYPPGRDCVWKVIASPDLLITFTFG 323
Query: 611 NFDLEDDPACLADYVEIYDSYDDVHGFVGRYCGAELPEDIISTGNVMTLKF 763
LE C DY+EI D +G++C + + +TG + F
Sbjct: 324 TLSLEHHDDCRKDYLEIRDGPLHQDPVLGKFCTSLSVPPLQTTGPFARIHF 374
Score = 52.8 bits (125), Expect = 3e-07
Identities = 26/83 (31%), Positives = 40/83 (48%)
Frame = +2
Query: 515 KSPGFPNEYDDNQICYWHIRLKYGQRIHVSFLNFDLEDDPACLADYVEIYDSYDDVHGFV 694
+SPG+P Y + C +R I + F F LED C D++E+ + + +
Sbjct: 2703 RSPGWPAGYASDADCAVVLRAPQNHTISLFFHAFGLEDSGGCTRDFLEVRNGSESTSPLL 2762
Query: 695 GRYCGAELPEDIISTGNVMTLKF 763
G+YCG LP I S + L+F
Sbjct: 2763 GKYCGTLLPNPIFSQSRDLYLRF 2785
>ref|XP_003129040.2| PREDICTED: tolloid-like protein 1 [Sus scrofa].
Length = 1013
Score = 74.7 bits (182), Expect = 7e-14
Identities = 31/97 (31%), Positives = 53/97 (54%)
Frame = +2
Query: 476 ECGGVFTDPKRIFKSPGFPNEYDDNQICYWHIRLKYGQRIHVSFLNFDLEDDPACLADYV 655
EC P SP +P++Y + C W I G R+ ++F F++E C D++
Sbjct: 773 ECEQKIHSPSGFITSPNWPDKYPSRKECTWEISATPGHRVKLAFSEFEIEQHQECAYDHL 832
Query: 656 EIYDSYDDVHGFVGRYCGAELPEDIISTGNVMTLKFL 766
E++D + +GR CG ++PE I++TGN M ++F+
Sbjct: 833 EVFDGETEKSPILGRLCGNKIPEPIVATGNKMFVRFV 869
Score = 73.9 bits (180), Expect = 1e-13
Identities = 36/95 (37%), Positives = 50/95 (52%)
Frame = +2
Query: 479 CGGVFTDPKRIFKSPGFPNEYDDNQICYWHIRLKYGQRIHVSFLNFDLEDDPACLADYVE 658
CGG+ T +PG+P EY N+ C W + RI + F F+LE + C DYVE
Sbjct: 618 CGGLLTKLNGTITTPGWPKEYPPNKHCVWQVVAPTQYRISMKFEFFELEGNEVCKYDYVE 677
Query: 659 IYDSYDDVHGFVGRYCGAELPEDIISTGNVMTLKF 763
I+ G++CGAE+PE I S N M ++F
Sbjct: 678 IWSGLSSESKLHGKFCGAEVPEVITSQFNNMRIEF 712
Score = 71.6 bits (174), Expect = 6e-13
Identities = 33/95 (34%), Positives = 49/95 (51%)
Frame = +2
Query: 479 CGGVFTDPKRIFKSPGFPNEYDDNQICYWHIRLKYGQRIHVSFLNFDLEDDPACLADYVE 658
CG + SPGFPN Y C W + + G++I ++F DL C DY+E
Sbjct: 349 CGETLQESNGNLSSPGFPNGYPSYTHCIWRVSVTAGEKIVLNFTTMDLYKSSLCWYDYIE 408
Query: 659 IYDSYDDVHGFVGRYCGAELPEDIISTGNVMTLKF 763
+ D Y +GR+CG +LPE + ST + M ++F
Sbjct: 409 VRDGYWRKSPLLGRFCGDKLPEVLTSTDSRMWIEF 443
Score = 69.3 bits (168), Expect = 3e-12
Identities = 31/96 (32%), Positives = 52/96 (54%)
Frame = +2
Query: 479 CGGVFTDPKRIFKSPGFPNEYDDNQICYWHIRLKYGQRIHVSFLNFDLEDDPACLADYVE 658
CGG + +SP +P++Y + C W I + + ++F F++E C DY+E
Sbjct: 462 CGGEIRKNEGQIQSPNYPDDYRPMKECVWKIAVSEDCYVGLTFQAFEIERHDNCAYDYLE 521
Query: 659 IYDSYDDVHGFVGRYCGAELPEDIISTGNVMTLKFL 766
+ D + +GR+CG + PEDI ST N + +KF+
Sbjct: 522 VRDGNSENSPLIGRFCGYDKPEDIKSTSNTLWMKFV 557
Score = 62.8 bits (151), Expect = 3e-10
Identities = 33/103 (32%), Positives = 55/103 (53%), Gaps = 4/103 (3%)
Frame = +2
Query: 467 HAKECGGVF---TDPKRIFKSPGF-PNEYDDNQICYWHIRLKYGQRIHVSFLNFDLEDDP 634
H+ ECGG + P ++ F N Y C W + + G R+ +SF F++E++
Sbjct: 883 HSTECGGRLKAESKPGDLYSHAQFGDNNYPGQVDCEWVLVSERGSRLELSFQIFEVEEEA 942
Query: 635 ACLADYVEIYDSYDDVHGFVGRYCGAELPEDIISTGNVMTLKF 763
C DYVE++D + +GR+CG+ PE+I S G+ + + F
Sbjct: 943 DCGYDYVELFDGLNSTAVGLGRFCGSGPPEEINSIGDTVLIHF 985
Database: RefSeq49_SP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 11,343,932
Number of sequences in database: 24,897
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 24897
Number of Hits to DB: 22,458,882
Number of extensions: 553869
Number of successful extensions: 1410
Number of sequences better than 1.0e-05: 46
Number of HSP's gapped: 1372
Number of HSP's successfully gapped: 104
Length of query: 320
Length of database: 11,343,932
Length adjustment: 99
Effective length of query: 221
Effective length of database: 8,879,129
Effective search space: 1962287509
Effective search space used: 1962287509
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 33 (17.3 bits)
Search to RefSeqMP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-013305
(960 letters)
Database: RefSeq49_MP.fasta
30,036 sequences; 15,617,559 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_033424.1| tumor necrosis factor-inducible gene 6 protein ... 470 e-140
Alignment gi|NP_619613.2| stabilin-1 precursor [Mus musculus]. 118 8e-27
Alignment gi|NP_619614.1| stabilin-2 precursor [Mus musculus]. 103 3e-22
Alignment gi|NP_071314.1| hyaluronan and proteoglycan link protein 2 prec... 81 1e-15
Alignment gi|NP_033885.2| bone morphogenetic protein 1 precursor [Mus mus... 81 1e-15
Alignment gi|NP_001177243.1| membrane frizzled-related protein isoform 2 ... 78 1e-14
Alignment gi|NP_667337.1| membrane frizzled-related protein isoform 1 [Mu... 78 1e-14
Alignment gi|NP_001074553.1| cubilin precursor [Mus musculus]. 75 6e-14
Alignment gi|NP_036034.1| tolloid-like protein 2 precursor [Mus musculus]. 74 1e-13
Alignment gi|NP_839986.2| hyaluronan and proteoglycan link protein 3 prec... 74 2e-13
>ref|NP_033424.1| tumor necrosis factor-inducible gene 6 protein precursor [Mus
musculus].
Length = 275
Score = 470 bits (1210), Expect(2) = e-140
Identities = 213/230 (92%), Positives = 223/230 (96%)
Frame = +2
Query: 77 MIILIYLFVFLWEEAHGWGFKNGIFHNSIWLEQAAGVYHREARSGKYKLTYAEAKAVCEY 256
M++L+ L V LWEEAHGWGFKNGIFHNSIWLEQAAGVYHREAR+G+YKLTYAEAKAVCE+
Sbjct: 1 MVVLLCLCVLLWEEAHGWGFKNGIFHNSIWLEQAAGVYHREARAGRYKLTYAEAKAVCEF 60
Query: 257 EGGRLATYKQLEAARKIGFHVCAAGWMAKGRVGYPIVKPGPNCGFGKTGIIDYGVRLNRS 436
EGGRLATYKQLEAARKIGFHVCAAGWMAKGRVGYPIVKPGPNCGFGKTGIIDYG+RLNRS
Sbjct: 61 EGGRLATYKQLEAARKIGFHVCAAGWMAKGRVGYPIVKPGPNCGFGKTGIIDYGIRLNRS 120
Query: 437 ERWDAYCYNLHAKECGGVFTDPKRIFKSPGFPNEYDDNQICYWHIRLKYGQRIHVSFLNF 616
ERWDAYCYN HAKECGGVFTDPKRIFKSPGFPNEYDDNQ+CYWHIRLKYGQRIH+SFL+F
Sbjct: 121 ERWDAYCYNPHAKECGGVFTDPKRIFKSPGFPNEYDDNQVCYWHIRLKYGQRIHLSFLDF 180
Query: 617 DLEDDPACLADYVEIYDSYDDVHGFVGRYCGAELPEDIISTGNVMTLKFL 766
DLE DP CLADYVEIYDSYDDVHGFVGRYCG ELPEDIISTGNVMTLKFL
Sbjct: 181 DLEHDPGCLADYVEIYDSYDDVHGFVGRYCGDELPEDIISTGNVMTLKFL 230
Score = 47.8 bits (112), Expect(2) = e-140
Identities = 23/31 (74%), Positives = 26/31 (83%)
Frame = +1
Query: 754 LEIPSDASVTAGGFQIQYVAVDPLSKTSQGK 846
L+ SDASVTAGGFQI+YV VDP SK+SQ K
Sbjct: 227 LKFLSDASVTAGGFQIKYVTVDPASKSSQAK 257
>ref|NP_619613.2| stabilin-1 precursor [Mus musculus].
Length = 2571
Score = 118 bits (295), Expect = 8e-27
Identities = 51/104 (49%), Positives = 69/104 (66%)
Frame = +2
Query: 170 EQAAGVYHREARSGKYKLTYAEAKAVCEYEGGRLATYKQLEAARKIGFHVCAAGWMAKGR 349
E+ AGV+H +A SG Y LT++EAK CE +G LA+ QL AA+++GFHVC GW+A G
Sbjct: 2204 EKQAGVFHIQATSGPYGLTFSEAKEACEGQGAVLASLPQLSAAQQLGFHVCFVGWLANGS 2263
Query: 350 VGYPIVKPGPNCGFGKTGIIDYGVRLNRSERWDAYCYNLHAKEC 481
+P+V P +CG + G++ GVR N SE WDAYCY + C
Sbjct: 2264 AAHPVVTPAADCGNNRVGVVSLGVRKNLSELWDAYCYRVQDVAC 2307
>ref|NP_619614.1| stabilin-2 precursor [Mus musculus].
Length = 2559
Score = 103 bits (256), Expect = 3e-22
Identities = 44/104 (42%), Positives = 61/104 (58%)
Frame = +2
Query: 170 EQAAGVYHREARSGKYKLTYAEAKAVCEYEGGRLATYKQLEAARKIGFHVCAAGWMAKGR 349
+ GV+H + G+YKLT+ +AK C E +ATY QL A+K +H+C+AGW+ GR
Sbjct: 2202 DTTVGVFHLRSPLGQYKLTFDKAKEACAKEAASIATYNQLSYAQKAKYHLCSAGWLESGR 2261
Query: 350 VGYPIVKPGPNCGFGKTGIIDYGVRLNRSERWDAYCYNLHAKEC 481
V YP + C GI+DYG R N+SE WD +CY + C
Sbjct: 2262 VAYPTIYASKKCA-NIVGIVDYGTRTNKSEMWDVFCYRMKDVNC 2304
>ref|NP_071314.1| hyaluronan and proteoglycan link protein 2 precursor [Mus
musculus].
Length = 341
Score = 80.9 bits (198), Expect = 1e-15
Identities = 49/127 (38%), Positives = 66/127 (51%), Gaps = 3/127 (2%)
Frame = +2
Query: 140 NGIFHNSI--WLEQAAGVYHREARSGKYKLTYAEAKAVCEYEGGRLATYKQLEAARKIGF 313
NGI S+ L V+ + G+Y+ Y EAK CE + GRLATY QL A G
Sbjct: 133 NGIEDESVALTLRLEGVVFPYQPSRGRYQFNYFEAKRACEEQDGRLATYGQLYQAWTEGL 192
Query: 314 HVCAAGWMAKGRVGYPIVKPGPNC-GFGKTGIIDYGVRLNRSERWDAYCYNLHAKECGGV 490
C AGW+ +G V YP++ C G G+ GI YG R +R+DA+C+ + G V
Sbjct: 193 DWCNAGWLLEGSVRYPVLTARAPCGGHGRPGIRSYGPRDRSRDRYDAFCFT--SALAGQV 250
Query: 491 FTDPKRI 511
F P R+
Sbjct: 251 FFVPGRL 257
Score = 53.9 bits (128), Expect = 2e-07
Identities = 30/83 (36%), Positives = 39/83 (46%), Gaps = 2/83 (2%)
Frame = +2
Query: 218 KLTYAEAKAVCEYEGGRLATYKQLEAARKI-GFHVCAAGWMAKGRVGYPIVKPGPNC-GF 391
+LT +EA A C G +A L AA K G C GW+A G V +PI P P C G
Sbjct: 256 RLTLSEAHAACRRRGAVVAKVGHLYAAWKFSGLDQCDGGWLADGSVRFPITTPRPRCGGL 315
Query: 392 GKTGIIDYGVRLNRSERWDAYCY 460
G+ +G + + YCY
Sbjct: 316 PDPGVRSFGFPRPQQASYGTYCY 338
>ref|NP_033885.2| bone morphogenetic protein 1 precursor [Mus musculus].
Length = 991
Score = 80.9 bits (198), Expect = 1e-15
Identities = 33/96 (34%), Positives = 58/96 (60%)
Frame = +2
Query: 479 CGGVFTDPKRIFKSPGFPNEYDDNQICYWHIRLKYGQRIHVSFLNFDLEDDPACLADYVE 658
CGG +SP +P++Y +++C W I++ G + ++F +F++E +C DY+E
Sbjct: 440 CGGDVKKDNGHIQSPNYPDDYRPSKVCIWRIQVSEGFHVGLTFQSFEIERHDSCAYDYLE 499
Query: 659 IYDSYDDVHGFVGRYCGAELPEDIISTGNVMTLKFL 766
+ D + + +GRYCG E P+DI ST + + LKF+
Sbjct: 500 VRDGHSESSNLIGRYCGYEKPDDIKSTSSRLWLKFV 535
Score = 75.5 bits (184), Expect = 6e-14
Identities = 32/95 (33%), Positives = 53/95 (55%)
Frame = +2
Query: 479 CGGVFTDPKRIFKSPGFPNEYDDNQICYWHIRLKYGQRIHVSFLNFDLEDDPACLADYVE 658
C T SP +P++Y + C W I G R+ ++F+ D+E P C D++E
Sbjct: 752 CEHKVTSTSGTITSPNWPDKYPSKKECTWAISSTPGHRVKLTFVEMDIESQPECAYDHLE 811
Query: 659 IYDSYDDVHGFVGRYCGAELPEDIISTGNVMTLKF 763
++D D +GR+CG++ PE +++TGN M L+F
Sbjct: 812 VFDGRDAKAPVLGRFCGSKKPEPVLATGNRMFLRF 846
Score = 70.9 bits (172), Expect = 1e-12
Identities = 34/95 (35%), Positives = 51/95 (53%)
Frame = +2
Query: 479 CGGVFTDPKRIFKSPGFPNEYDDNQICYWHIRLKYGQRIHVSFLNFDLEDDPACLADYVE 658
CG D F SP +PN Y + C W I + G++I ++F + DL C DYVE
Sbjct: 327 CGETLQDSTGNFSSPEYPNGYSAHMHCVWRISVTPGEKIILNFTSMDLYRSRLCWYDYVE 386
Query: 659 IYDSYDDVHGFVGRYCGAELPEDIISTGNVMTLKF 763
+ D + GR+CG +LPE I+ST + + ++F
Sbjct: 387 VRDGFWRKAPLRGRFCGGKLPEPIVSTDSRLWVEF 421
Score = 67.8 bits (164), Expect = 1e-11
Identities = 34/103 (33%), Positives = 54/103 (52%), Gaps = 4/103 (3%)
Frame = +2
Query: 467 HAKECGGVF---TDPKRIFKSPGF-PNEYDDNQICYWHIRLKYGQRIHVSFLNFDLEDDP 634
H+ ECGG K ++ F N Y C W I + G + + F F++E++
Sbjct: 861 HSTECGGQVRADVKTKDLYSHAQFGDNNYPGGVDCEWVIVAEEGYGVELVFQTFEVEEET 920
Query: 635 ACLADYVEIYDSYDDVHGFVGRYCGAELPEDIISTGNVMTLKF 763
C DY+E++D YD +GRYCG+ PE++ S G+ + +KF
Sbjct: 921 DCGYDYIELFDGYDSTAPRLGRYCGSGPPEEVYSAGDSVLVKF 963
Score = 63.5 bits (153), Expect = 2e-10
Identities = 33/95 (34%), Positives = 46/95 (48%)
Frame = +2
Query: 479 CGGVFTDPKRIFKSPGFPNEYDDNQICYWHIRLKYGQRIHVSFLNFDLEDDPACLADYVE 658
CGG T SPG+P EY N+ C W + RI + F F+ E + C D+VE
Sbjct: 596 CGGFLTKLNGSITSPGWPKEYPPNKNCIWQLVAPTQYRISLQFDFFETEGNDVCKYDFVE 655
Query: 659 IYDSYDDVHGFVGRYCGAELPEDIISTGNVMTLKF 763
+ G++CG+E PE I S N M ++F
Sbjct: 656 VRSGLTADSKLHGKFCGSEKPEVITSQYNNMRVEF 690
>ref|NP_001177243.1| membrane frizzled-related protein isoform 2 [Mus musculus].
Length = 578
Score = 77.8 bits (190), Expect = 1e-14
Identities = 35/96 (36%), Positives = 55/96 (57%), Gaps = 1/96 (1%)
Frame = +2
Query: 479 CGGVFTDPKRIFKSPGFPNEYDDNQICYWHIRLKYGQRIHVSFLNFDLEDDPACLADYVE 658
CGG T +F +P +P Y Q+C W+I + G I + F NF LE C DYVE
Sbjct: 307 CGGNLTGLYGVFSTPNYPQHYPHQQLCTWYIEVPVGYGIRLEFHNFSLEAQAECKFDYVE 366
Query: 659 IYDSYD-DVHGFVGRYCGAELPEDIISTGNVMTLKF 763
+Y++ + F+GR+CGAE P +++S+ + + + F
Sbjct: 367 VYEASNLGTFSFLGRFCGAEPPLNVVSSMHQLAVIF 402
Score = 55.1 bits (131), Expect = 8e-08
Identities = 38/135 (28%), Positives = 54/135 (40%)
Frame = +2
Query: 431 RSERWDAYCYNLHAKECGGVFTDPKRIFKSPGFPNEYDDNQICYWHIRLKYGQRIHVSFL 610
R+ + +A H CGG+ P F SP +P+ Y C WHI++ GQ I +
Sbjct: 134 RTGQQEAAMSPTHQTTCGGLLPGPSGFFSSPNYPDLYPPLSHCVWHIQVAAGQTIQLKIQ 193
Query: 611 NFDLEDDPACLADYVEIYDSYDDVHGFVGRYCGAELPEDIISTGNVMTLKFLVMLP*QQE 790
+E CL D +EI + G + R CG P +T N T V +
Sbjct: 194 ALSIESMLTCLFDRLEI---ISEPTGPLLRVCGKTPP----ATLNTNTSHLRVSFVSDND 246
Query: 791 VSKSNMLPWTPSQKP 835
V S W + P
Sbjct: 247 VEGSGFQAWYQAVAP 261
>ref|NP_667337.1| membrane frizzled-related protein isoform 1 [Mus musculus].
Length = 584
Score = 77.8 bits (190), Expect = 1e-14
Identities = 35/96 (36%), Positives = 55/96 (57%), Gaps = 1/96 (1%)
Frame = +2
Query: 479 CGGVFTDPKRIFKSPGFPNEYDDNQICYWHIRLKYGQRIHVSFLNFDLEDDPACLADYVE 658
CGG T +F +P +P Y Q+C W+I + G I + F NF LE C DYVE
Sbjct: 307 CGGNLTGLYGVFSTPNYPQHYPHQQLCTWYIEVPVGYGIRLEFHNFSLEAQAECKFDYVE 366
Query: 659 IYDSYD-DVHGFVGRYCGAELPEDIISTGNVMTLKF 763
+Y++ + F+GR+CGAE P +++S+ + + + F
Sbjct: 367 VYEASNLGTFSFLGRFCGAEPPLNVVSSMHQLAVIF 402
Score = 55.1 bits (131), Expect = 8e-08
Identities = 38/135 (28%), Positives = 54/135 (40%)
Frame = +2
Query: 431 RSERWDAYCYNLHAKECGGVFTDPKRIFKSPGFPNEYDDNQICYWHIRLKYGQRIHVSFL 610
R+ + +A H CGG+ P F SP +P+ Y C WHI++ GQ I +
Sbjct: 134 RTGQQEAAMSPTHQTTCGGLLPGPSGFFSSPNYPDLYPPLSHCVWHIQVAAGQTIQLKIQ 193
Query: 611 NFDLEDDPACLADYVEIYDSYDDVHGFVGRYCGAELPEDIISTGNVMTLKFLVMLP*QQE 790
+E CL D +EI + G + R CG P +T N T V +
Sbjct: 194 ALSIESMLTCLFDRLEI---ISEPTGPLLRVCGKTPP----ATLNTNTSHLRVSFVSDND 246
Query: 791 VSKSNMLPWTPSQKP 835
V S W + P
Sbjct: 247 VEGSGFQAWYQAVAP 261
>ref|NP_001074553.1| cubilin precursor [Mus musculus].
Length = 3623
Score = 75.5 bits (184), Expect = 6e-14
Identities = 38/97 (39%), Positives = 54/97 (55%)
Frame = +2
Query: 476 ECGGVFTDPKRIFKSPGFPNEYDDNQICYWHIRLKYGQRIHVSFLNFDLEDDPACLADYV 655
ECG V T+ I +SPG PN Y C WHI ++ GQ I + F +F LE C DY+
Sbjct: 931 ECGKVLTESTGIIESPGHPNVYPSGVNCTWHIVVQRGQLIRLVFSSFYLEFHYNCANDYL 990
Query: 656 EIYDSYDDVHGFVGRYCGAELPEDIISTGNVMTLKFL 766
E+YD+ +GRYCG +P + S+ + + L F+
Sbjct: 991 EVYDTIAQTS--LGRYCGKSIPPSLTSSSHSIKLIFV 1025
Score = 75.1 bits (183), Expect = 8e-14
Identities = 39/104 (37%), Positives = 56/104 (53%), Gaps = 1/104 (0%)
Frame = +2
Query: 458 YNLHAKECGGVFTDPKRIFKSPGFPNEYDDNQICYWHIRLKYGQRIHVSFLNFDLEDDPA 637
Y+ CGG F IF SPG+P +Y N C W+I G + +SFL+F LE+
Sbjct: 1731 YSASTSACGGTFYTGDGIFNSPGYPEDYHSNTECVWNIASSPGNHLQLSFLSFQLENSLN 1790
Query: 638 CLADYVEIYDSYDDVHGFVGRYCGAELPEDIIS-TGNVMTLKFL 766
C D+VEI + H +GRYCG LP + S G+ + ++F+
Sbjct: 1791 CNKDFVEIREGNATGH-LMGRYCGNSLPGNYSSIEGHNLWVRFV 1833
Score = 74.3 bits (181), Expect = 1e-13
Identities = 40/100 (40%), Positives = 53/100 (53%), Gaps = 2/100 (2%)
Frame = +2
Query: 473 KECGG-VFTDPKRIFKSPGFPNEYDDNQICYWHIRLKYG-QRIHVSFLNFDLEDDPACLA 646
+ECG + TD SP +P Y +NQ C W I + I +SF +F L+ C
Sbjct: 1618 QECGAHIITDSSDSISSPLYPANYPNNQNCTWIIEAQPPFNHIALSFTHFHLQSSTDCTR 1677
Query: 647 DYVEIYDSYDDVHGFVGRYCGAELPEDIISTGNVMTLKFL 766
D+VEI D D GRYCG LP IIS GN +T++F+
Sbjct: 1678 DFVEILDGRDSDAPVQGRYCGTSLPHPIISFGNALTVRFV 1717
Score = 70.5 bits (171), Expect(2) = 1e-12
Identities = 31/97 (31%), Positives = 56/97 (57%), Gaps = 1/97 (1%)
Frame = +2
Query: 479 CGGVFTDPKRIFKSPGFPNE-YDDNQICYWHIRLKYGQRIHVSFLNFDLEDDPACLADYV 655
CGG + + +S G+P Y +N C WHI+ G + + F +F+L+ P C D+V
Sbjct: 2336 CGGTVSGDSGVIESVGYPTRLYANNVFCQWHIQGLPGHYLTIRFEDFNLQSSPGCAKDFV 2395
Query: 656 EIYDSYDDVHGFVGRYCGAELPEDIISTGNVMTLKFL 766
EI++++ +GRYCG +P + ++ NV +++F+
Sbjct: 2396 EIWENHTS-GILLGRYCGNSIPSSVDTSSNVASIRFV 2431
Score = 20.4 bits (41), Expect(2) = 1e-12
Identities = 7/14 (50%), Positives = 11/14 (78%)
Frame = +1
Query: 766 SDASVTAGGFQIQY 807
+D SVT GF++Q+
Sbjct: 2432 TDGSVTDSGFRLQF 2445
Score = 65.9 bits (159), Expect = 5e-11
Identities = 31/85 (36%), Positives = 48/85 (56%)
Frame = +2
Query: 509 IFKSPGFPNEYDDNQICYWHIRLKYGQRIHVSFLNFDLEDDPACLADYVEIYDSYDDVHG 688
I +S +PN YD +Q C W I+ G ++ +FL FD+E+ C DY+E+YD
Sbjct: 1290 ILESINYPNPYDKDQRCNWTIQATTGNTVNYTFLEFDVENYVNCSTDYLELYDGPQR--- 1346
Query: 689 FVGRYCGAELPEDIISTGNVMTLKF 763
+GRYCG +P +TG+ + + F
Sbjct: 1347 -IGRYCGENIPPPGATTGSKLIVVF 1370
Score = 64.7 bits (156), Expect = 1e-10
Identities = 38/148 (25%), Positives = 64/148 (43%), Gaps = 3/148 (2%)
Frame = +2
Query: 311 FHVCAAGWMAKG---RVGYPIVKPGPNCGFGKTGIIDYGVRLNRSERWDAYCYNLHAKEC 481
F C +GW + + + P N G G+ G + + W Y C
Sbjct: 417 FCKCDSGWFGQNCTENINECVSNPCLNGGTCIDGV--NGFTCDCTSSWTGYYCQTPQAAC 474
Query: 482 GGVFTDPKRIFKSPGFPNEYDDNQICYWHIRLKYGQRIHVSFLNFDLEDDPACLADYVEI 661
GG+ + + F + Y N C+W +R + +H++F FDLE C +Y++I
Sbjct: 475 GGILSGTQGTFAYQSPNDTYVHNVNCFWVVRTDEEKVLHITFTFFDLESASNCPREYLQI 534
Query: 662 YDSYDDVHGFVGRYCGAELPEDIISTGN 745
+D +GRYCG+ P+ + S+ N
Sbjct: 535 HDGDSSADFPLGRYCGSTPPQGVHSSAN 562
Score = 64.7 bits (156), Expect = 1e-10
Identities = 33/109 (30%), Positives = 49/109 (44%)
Frame = +2
Query: 434 SERWDAYCYNLHAKECGGVFTDPKRIFKSPGFPNEYDDNQICYWHIRLKYGQRIHVSFLN 613
S WDA + CGG T P + SP +P Y + CYW + G + F +
Sbjct: 1155 SAYWDA-----SSTGCGGNLTTPTGVLTSPNYPMPYYHSSECYWRLEASRGSPFLLEFQD 1209
Query: 614 FDLEDDPACLADYVEIYDSYDDVHGFVGRYCGAELPEDIISTGNVMTLK 760
F LE P C DY+ ++D + + CG P I S+ +++ LK
Sbjct: 1210 FHLEHHPNCSLDYLAVFDGPSTNSRLINKLCGDTPPAPIRSSKDIVLLK 1258
Score = 64.3 bits (155), Expect = 1e-10
Identities = 30/95 (31%), Positives = 46/95 (48%)
Frame = +2
Query: 479 CGGVFTDPKRIFKSPGFPNEYDDNQICYWHIRLKYGQRIHVSFLNFDLEDDPACLADYVE 658
CGG+ T + SP +PN Y C W + G I ++F +F +E+ P C +D V
Sbjct: 2689 CGGIQTGENGVISSPNYPNLYSRWTQCSWLLEAPEGHTITLTFSDFSVENHPTCTSDSVT 2748
Query: 659 IYDSYDDVHGFVGRYCGAELPEDIISTGNVMTLKF 763
+ + +GRYCG +P I S N + + F
Sbjct: 2749 VRNGDSPGSPIIGRYCGQSVPGPIQSGSNQLVVTF 2783
Score = 63.9 bits (154), Expect = 2e-10
Identities = 33/98 (33%), Positives = 50/98 (51%), Gaps = 3/98 (3%)
Frame = +2
Query: 479 CGGVFTDPKRIFKSPGFPNEYDDNQICYWHIRLKYGQRIHVSFLNFDLEDDPACLADYVE 658
CGG + F SPG+PN Y N+ C W+IR+ G I ++ +FD+E +C D +E
Sbjct: 1391 CGGEMSGTMGSFSSPGYPNSYPHNKECIWNIRVAPGNSIQLTIHDFDVEYHASCKYDTLE 1450
Query: 659 IYDSYDDVHGFVGRYCG---AELPEDIISTGNVMTLKF 763
IY D + + C + P I ST N + ++F
Sbjct: 1451 IYTGLDFHSPRIAQLCSRSPSANPMQISSTDNELAIRF 1488
Score = 62.8 bits (151), Expect = 4e-10
Identities = 29/96 (30%), Positives = 54/96 (56%), Gaps = 1/96 (1%)
Frame = +2
Query: 479 CGGVFTDPKRIFKSPGFP-NEYDDNQICYWHIRLKYGQRIHVSFLNFDLEDDPACLADYV 655
CGG+++ + SP F Y +N C + ++++ + I + F +F++ C DY+
Sbjct: 3037 CGGIYSGTYGVLNSPSFSYTNYPNNVYCVYSLQVRNDRLILLRFNDFEIVPSNLCSHDYL 3096
Query: 656 EIYDSYDDVHGFVGRYCGAELPEDIISTGNVMTLKF 763
E++D + +G++CG+ LP+ I ST N +TL F
Sbjct: 3097 EVFDGPSIGNRSIGKFCGSTLPQVIKSTNNSLTLLF 3132
Score = 62.4 bits (150), Expect = 5e-10
Identities = 36/93 (38%), Positives = 49/93 (52%), Gaps = 2/93 (2%)
Frame = +2
Query: 491 FTDPKRIFKSPGFPNEYDDNQICYWHIRLKYGQRIHVSFLNFDLED--DPACLADYVEIY 664
+TD SP FPN Y N C + I + Q+I + F +F LED P C+ D+VEI
Sbjct: 1052 YTDNFGRLSSPNFPNNYPHNWNCVYRITVGLNQQIALHFTDFALEDYFGPKCV-DFVEIR 1110
Query: 665 DSYDDVHGFVGRYCGAELPEDIISTGNVMTLKF 763
D + +G YCG+ P IIS N + L+F
Sbjct: 1111 DGGFETSPLIGIYCGSVFPPRIISHSNKLWLRF 1143
Score = 60.5 bits (145), Expect = 2e-09
Identities = 33/101 (32%), Positives = 52/101 (51%), Gaps = 5/101 (4%)
Frame = +2
Query: 479 CGGVFTDPKRIFKSPGFPNE--YDDNQICYWHIRLKYGQRIHVSFLNFDLEDDPA---CL 643
CGG T+ + F SP ++ YD C W+I + + ++F F LE+ + C
Sbjct: 3157 CGGYLTEDSKSFVSPDHDSDGLYDKGLNCIWYIIAPENKLVKLTFNAFTLEEPSSPGKCT 3216
Query: 644 ADYVEIYDSYDDVHGFVGRYCGAELPEDIISTGNVMTLKFL 766
DYV+I D GR+CG+ P IS+GN +T++F+
Sbjct: 3217 FDYVQIADGASINSYLGGRFCGSSRPAPFISSGNFLTVQFV 3257
Score = 58.2 bits (139), Expect = 1e-08
Identities = 34/113 (30%), Positives = 50/113 (44%)
Frame = +2
Query: 425 LNRSERWDAYCYNLHAKECGGVFTDPKRIFKSPGFPNEYDDNQICYWHIRLKYGQRIHVS 604
LNR+ R + +C + KSPG+P Y +N C +R RI +
Sbjct: 3380 LNRNSRVH---FTYEIADCNREYNQAFGNLKSPGWPQGYANNLDCSIILRAPQNHRISLF 3436
Query: 605 FLNFDLEDDPACLADYVEIYDSYDDVHGFVGRYCGAELPEDIISTGNVMTLKF 763
F F LED C+ D++E+ + +G+YC LP I S N + L F
Sbjct: 3437 FYWFQLEDSRQCMNDFLEVRNGSSSSSPLLGKYCSNLLPNPIFSQSNELYLHF 3489
Score = 57.0 bits (136), Expect = 2e-08
Identities = 31/96 (32%), Positives = 48/96 (50%), Gaps = 1/96 (1%)
Frame = +2
Query: 479 CGGVFTDPKRIFKSPGFPNEYDDNQICYWHIRLKYGQRIHVSFLNFDLEDDPACLADYVE 658
CGG+F + SP +PN Y N C W I+++ R+ ++ +FDLE +CL
Sbjct: 1510 CGGIFQVSRGEIHSPNYPNNYRANTECSWIIQVEKYHRVLLNITDFDLEATDSCLM---- 1565
Query: 659 IYDSYDDVHGFVGRYCGAEL-PEDIISTGNVMTLKF 763
YD + V CG + P I S+GN + ++F
Sbjct: 1566 TYDGSSSANTRVATVCGRQQPPNSITSSGNSLFVRF 1601
Score = 55.8 bits (133), Expect = 5e-08
Identities = 31/108 (28%), Positives = 47/108 (43%)
Frame = +2
Query: 440 RWDAYCYNLHAKECGGVFTDPKRIFKSPGFPNEYDDNQICYWHIRLKYGQRIHVSFLNFD 619
RW+A ECGG+ T SPG+P Y + C W++ + G I +F
Sbjct: 582 RWEA-----KLPECGGILTGNYGSITSPGYPGNYPPGRDCVWNLLVSPGSLITFTFGTLS 636
Query: 620 LEDDPACLADYVEIYDSYDDVHGFVGRYCGAELPEDIISTGNVMTLKF 763
LE C DY+EI D +G++C + + +TG + F
Sbjct: 637 LESHNDCSKDYLEIRDGPFHHDPILGKFCTSLSTPPLQTTGPAARIHF 684
Score = 55.1 bits (131), Expect = 8e-08
Identities = 30/107 (28%), Positives = 50/107 (46%), Gaps = 5/107 (4%)
Frame = +2
Query: 458 YNLHAKECGGVF----TDPKRIFKSPGFPNEYDDNQICYWHIRLKYGQRIHVSFLN-FDL 622
Y + CGG + SP +P Y + C W + G+ I + F + F++
Sbjct: 2210 YEAKSLACGGTIYIHDANSDGYVTSPNYPANYPQHAECIWILEAPSGRSIQLQFEDQFNI 2269
Query: 623 EDDPACLADYVEIYDSYDDVHGFVGRYCGAELPEDIISTGNVMTLKF 763
E+ P C A Y+E+ D + + + CG LP + +S+ +M LKF
Sbjct: 2270 EETPNCSASYLELRDGANSNAPVLSKLCGHTLPRNWVSSRGLMYLKF 2316
Score = 51.2 bits (121), Expect = 1e-06
Identities = 30/107 (28%), Positives = 47/107 (43%), Gaps = 9/107 (8%)
Frame = +2
Query: 473 KECGGVFTDPKRIFKSPGFPNEYDDNQICYWHIRLKYGQRIHVSF---LNFDLEDDPACL 643
K CGG + I SP +P+ Y N C WH+ ++ G I V F D
Sbjct: 2090 KSCGGYLHADRGIITSPKYPDNYLPNLNCSWHVLVQSGLTIAVHFEQPFQIQNRDSSCSQ 2149
Query: 644 ADYVEIYDSYDD------VHGFVGRYCGAELPEDIISTGNVMTLKFL 766
DY+ + + D+ G GR+CG P + ++ N M ++F+
Sbjct: 2150 GDYLVLRNGPDNHSPPLGPSGGNGRFCGIYTPSTLFTSDNEMFIQFI 2196
Score = 50.8 bits (120), Expect = 2e-06
Identities = 30/98 (30%), Positives = 49/98 (50%), Gaps = 2/98 (2%)
Frame = +2
Query: 479 CGGVFTDPKRIFKSPGFPNEYDDNQICYWHIRLKYGQRIHVSFLNFDLEDDPACLADYVE 658
CGG + + +SP +PN Y + C W I + + ++F +F + +C DY+E
Sbjct: 817 CGGELRG-EGVIRSPFYPNAYAGRRTCRWTISQPPREVVLLNFTDFQIGSSSSCDTDYIE 875
Query: 659 IYDSYDDVHGFVG--RYCGAELPEDIISTGNVMTLKFL 766
I S V G G ++CG +P I S NV+ + F+
Sbjct: 876 IGPS--SVLGSPGNEKFCGTNIPSFITSVYNVLYVTFV 911
Score = 48.5 bits (114), Expect = 8e-06
Identities = 25/96 (26%), Positives = 46/96 (47%), Gaps = 1/96 (1%)
Frame = +2
Query: 479 CGGVFTDPKRIFKSPGFPNEYDDNQICYWHIRLKYGQRIHVSFLNFDLEDDPACLADYVE 658
CGG P F SP +PN +IC W I + G++I ++F N L +C +++
Sbjct: 2452 CGGDLHGPTGTFTSPNYPNPNPHPRICEWTINVHEGRQIILTFTNLRLSTQQSCNTEHLI 2511
Query: 659 IYDSYDDVHGFVGRYCG-AELPEDIISTGNVMTLKF 763
+++ + + + C + + S+GN M + F
Sbjct: 2512 VFNGIRNNSPRLQKLCSRVNVTNEFKSSGNTMKVIF 2547
>ref|NP_036034.1| tolloid-like protein 2 precursor [Mus musculus].
Length = 1012
Score = 74.3 bits (181), Expect = 1e-13
Identities = 33/109 (30%), Positives = 61/109 (55%), Gaps = 7/109 (6%)
Frame = +2
Query: 458 YNLH-----AKECGGVF--TDPKRIFKSPGFPNEYDDNQICYWHIRLKYGQRIHVSFLNF 616
Y LH KE G + + + SP +P++Y + C W+I G R+ ++F F
Sbjct: 759 YRLHENGHDCKEAGCAYKISSAEGTLMSPNWPDKYPSRKECTWNISSTAGHRVKITFSEF 818
Query: 617 DLEDDPACLADYVEIYDSYDDVHGFVGRYCGAELPEDIISTGNVMTLKF 763
++E C D++E+YD D + +GR+CG++ P+ +++TG+ + L+F
Sbjct: 819 EIEQHQECAYDHLELYDGTDSLAPILGRFCGSKKPDPVVATGSSLFLRF 867
Score = 73.2 bits (178), Expect = 3e-13
Identities = 34/95 (35%), Positives = 52/95 (54%)
Frame = +2
Query: 479 CGGVFTDPKRIFKSPGFPNEYDDNQICYWHIRLKYGQRIHVSFLNFDLEDDPACLADYVE 658
CG D F +PGFPN Y C W I + G++I ++F + DL C DYVE
Sbjct: 348 CGETLQDTTGNFSAPGFPNGYPSYSHCVWRISVTPGEKIILNFTSMDLFKSRLCWYDYVE 407
Query: 659 IYDSYDDVHGFVGRYCGAELPEDIISTGNVMTLKF 763
I D Y +GR+CG ++PE ++S+ + + ++F
Sbjct: 408 IRDGYWRKAPLLGRFCGDKIPESLVSSDSRLWVEF 442
Score = 69.7 bits (169), Expect = 3e-12
Identities = 31/96 (32%), Positives = 54/96 (56%)
Frame = +2
Query: 479 CGGVFTDPKRIFKSPGFPNEYDDNQICYWHIRLKYGQRIHVSFLNFDLEDDPACLADYVE 658
CGG T +SP +P++Y ++ C W I + G + ++F +F++E +C DY+E
Sbjct: 461 CGGDITKDAGQIQSPNYPDDYRPSKECVWRITVPDGFHVGLTFQSFEIERHDSCAYDYLE 520
Query: 659 IYDSYDDVHGFVGRYCGAELPEDIISTGNVMTLKFL 766
I D + +G +CG E PE + S+ N + +KF+
Sbjct: 521 IRDGPTEDSTLIGHFCGYEKPEAVKSSANRLWVKFV 556
Score = 69.3 bits (168), Expect = 4e-12
Identities = 34/95 (35%), Positives = 47/95 (49%)
Frame = +2
Query: 479 CGGVFTDPKRIFKSPGFPNEYDDNQICYWHIRLKYGQRIHVSFLNFDLEDDPACLADYVE 658
CGG T SPG+P EY N+ C W + RI + F F+LE + C D+VE
Sbjct: 617 CGGFITKLNGTITSPGWPKEYPTNKNCVWQVVAPVQYRISLQFEAFELEGNDVCKYDFVE 676
Query: 659 IYDSYDDVHGFVGRYCGAELPEDIISTGNVMTLKF 763
+ G++CG+E PE I S N M ++F
Sbjct: 677 VRSGLSPDAKLHGKFCGSETPEVITSQSNNMRVEF 711
Score = 61.2 bits (147), Expect = 1e-09
Identities = 32/104 (30%), Positives = 53/104 (50%), Gaps = 4/104 (3%)
Frame = +2
Query: 464 LHAKECGGVF---TDPKRIFKSPGF-PNEYDDNQICYWHIRLKYGQRIHVSFLNFDLEDD 631
+H+ ECGG K ++ F N Y C W I + G + + F F++E++
Sbjct: 881 VHSTECGGRLKAEVQTKELYSHAQFGDNNYPSQARCDWVIVAEDGYGVELIFRTFEVEEE 940
Query: 632 PACLADYVEIYDSYDDVHGFVGRYCGAELPEDIISTGNVMTLKF 763
C D++E YD YD +GR+CG+ E+I S G+ + ++F
Sbjct: 941 ADCGYDFMEAYDGYDSSAPRLGRFCGSGPLEEIYSAGDSLMIRF 984
>ref|NP_839986.2| hyaluronan and proteoglycan link protein 3 precursor [Mus
musculus].
Length = 359
Score = 73.9 bits (180), Expect = 2e-13
Identities = 41/117 (35%), Positives = 63/117 (53%), Gaps = 2/117 (1%)
Frame = +2
Query: 167 LEQAAGVYHREARSGKYKLTYAEAKAVCEYEGGRLATYKQLEAARKIGFHVCAAGWMAKG 346
LE V+ ++R G+Y+L + EA+ C+ +G +AT++QL A + G C AGW+
Sbjct: 161 LELRGVVFPYQSREGRYQLNFHEAQQACQEQGAMVATFEQLFRAWEEGLDWCNAGWLQDA 220
Query: 347 RVGYPIVKPGPNC-GFG-KTGIIDYGVRLNRSERWDAYCYNLHAKECGGVFTDPKRI 511
V YPIV P C G G G+ YG R +R R+D +C+ K +PK++
Sbjct: 221 SVQYPIVLPRQPCGGLGLAPGVRSYGQRHHRLHRYDVFCFAAALKGRVYYLENPKKL 277
Score = 63.5 bits (153), Expect = 2e-10
Identities = 35/85 (41%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
Frame = +2
Query: 218 KLTYAEAKAVCEYEGGRLATYKQLEAARKI-GFHVCAAGWMAKGRVGYPIVKPGPNCGFG 394
KLT EA+ C+ +G +++T QL AA K G C AGW+A G YPIV P NCG
Sbjct: 276 KLTLLEAREACQEDGAQISTVGQLFAAWKFRGLDRCDAGWLADGSARYPIVHPRLNCGPP 335
Query: 395 KTGIIDYGVRLNRSERWDAYCYNLH 469
+ G+ +G + R+ YCY H
Sbjct: 336 EPGVRTFGFP-DPHTRYGVYCYVQH 359
Database: RefSeq49_MP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 15,617,559
Number of sequences in database: 30,036
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 30036
Number of Hits to DB: 30,723,151
Number of extensions: 759304
Number of successful extensions: 2050
Number of sequences better than 1.0e-05: 58
Number of HSP's gapped: 1981
Number of HSP's successfully gapped: 154
Length of query: 320
Length of database: 15,617,559
Length adjustment: 101
Effective length of query: 219
Effective length of database: 12,583,923
Effective search space: 2755879137
Effective search space used: 2755879137
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)
Search to RefSeqHP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-013305
(960 letters)
Database: RefSeq49_HP.fasta
32,964 sequences; 18,297,164 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_009046.2| tumor necrosis factor-inducible gene 6 protein ... 467 e-140
Alignment gi|NP_055951.2| stabilin-1 precursor [Homo sapiens]. 118 9e-27
Alignment gi|NP_060034.9| stabilin-2 precursor [Homo sapiens]. 109 3e-24
Alignment gi|NP_068589.1| hyaluronan and proteoglycan link protein 2 prec... 81 2e-15
Alignment gi|NP_006120.1| bone morphogenetic protein 1 isoform 3 precurso... 79 5e-15
Alignment gi|NP_001190.1| bone morphogenetic protein 1 isoform 1 precurso... 79 5e-15
Alignment gi|NP_075378.1| hyaluronan and proteoglycan link protein 4 prec... 78 1e-14
Alignment gi|NP_001072.2| cubilin precursor [Homo sapiens]. 76 4e-14
Alignment gi|NP_036596.3| tolloid-like protein 1 isoform 1 precursor [Hom... 75 9e-14
Alignment gi|NP_443128.2| CUB and sushi domain-containing protein 2 [Homo... 74 2e-13
>ref|NP_009046.2| tumor necrosis factor-inducible gene 6 protein precursor [Homo
sapiens].
Length = 277
Score = 467 bits (1202), Expect(2) = e-140
Identities = 212/230 (92%), Positives = 223/230 (96%)
Frame = +2
Query: 77 MIILIYLFVFLWEEAHGWGFKNGIFHNSIWLEQAAGVYHREARSGKYKLTYAEAKAVCEY 256
MIILIYLF+ LWE+ GWGFK+GIFHNSIWLE+AAGVYHREARSGKYKLTYAEAKAVCE+
Sbjct: 1 MIILIYLFLLLWEDTQGWGFKDGIFHNSIWLERAAGVYHREARSGKYKLTYAEAKAVCEF 60
Query: 257 EGGRLATYKQLEAARKIGFHVCAAGWMAKGRVGYPIVKPGPNCGFGKTGIIDYGVRLNRS 436
EGG LATYKQLEAARKIGFHVCAAGWMAKGRVGYPIVKPGPNCGFGKTGIIDYG+RLNRS
Sbjct: 61 EGGHLATYKQLEAARKIGFHVCAAGWMAKGRVGYPIVKPGPNCGFGKTGIIDYGIRLNRS 120
Query: 437 ERWDAYCYNLHAKECGGVFTDPKRIFKSPGFPNEYDDNQICYWHIRLKYGQRIHVSFLNF 616
ERWDAYCYN HAKECGGVFTDPK+IFKSPGFPNEY+DNQICYWHIRLKYGQRIH+SFL+F
Sbjct: 121 ERWDAYCYNPHAKECGGVFTDPKQIFKSPGFPNEYEDNQICYWHIRLKYGQRIHLSFLDF 180
Query: 617 DLEDDPACLADYVEIYDSYDDVHGFVGRYCGAELPEDIISTGNVMTLKFL 766
DLEDDP CLADYVEIYDSYDDVHGFVGRYCG ELP+DIISTGNVMTLKFL
Sbjct: 181 DLEDDPGCLADYVEIYDSYDDVHGFVGRYCGDELPDDIISTGNVMTLKFL 230
Score = 51.2 bits (121), Expect(2) = e-140
Identities = 24/31 (77%), Positives = 29/31 (93%)
Frame = +1
Query: 754 LEIPSDASVTAGGFQIQYVAVDPLSKTSQGK 846
L+ SDASVTAGGFQI+YVA+DP+SK+SQGK
Sbjct: 227 LKFLSDASVTAGGFQIKYVAMDPVSKSSQGK 257
>ref|NP_055951.2| stabilin-1 precursor [Homo sapiens].
Length = 2570
Score = 118 bits (295), Expect = 9e-27
Identities = 50/104 (48%), Positives = 71/104 (68%)
Frame = +2
Query: 170 EQAAGVYHREARSGKYKLTYAEAKAVCEYEGGRLATYKQLEAARKIGFHVCAAGWMAKGR 349
E+ AGV+H +A SG Y L ++EA+A CE +G LA++ QL AA+++GFH+C GW+A G
Sbjct: 2204 EKRAGVFHLQATSGPYGLNFSEAEAACEAQGAVLASFPQLSAAQQLGFHLCLMGWLANGS 2263
Query: 350 VGYPIVKPGPNCGFGKTGIIDYGVRLNRSERWDAYCYNLHAKEC 481
+P+V P +CG G+ GI+ G R N SERWDAYC+ + C
Sbjct: 2264 TAHPVVFPVADCGNGRVGIVSLGARKNLSERWDAYCFRVQDVAC 2307
>ref|NP_060034.9| stabilin-2 precursor [Homo sapiens].
Length = 2551
Score = 109 bits (273), Expect = 3e-24
Identities = 46/104 (44%), Positives = 63/104 (60%)
Frame = +2
Query: 170 EQAAGVYHREARSGKYKLTYAEAKAVCEYEGGRLATYKQLEAARKIGFHVCAAGWMAKGR 349
+ GV+H + G+YKLT+ +A+ C E +ATY QL A+K +H+C+AGW+ GR
Sbjct: 2194 DTTVGVFHLRSPLGQYKLTFDKAREACANEAATMATYNQLSYAQKAKYHLCSAGWLETGR 2253
Query: 350 VGYPIVKPGPNCGFGKTGIIDYGVRLNRSERWDAYCYNLHAKEC 481
V YP NCG G GI+DYG R N+SE WD +CY + C
Sbjct: 2254 VAYPTAFASQNCGSGVVGIVDYGPRPNKSEMWDVFCYRMKDVNC 2297
>ref|NP_068589.1| hyaluronan and proteoglycan link protein 2 precursor [Homo
sapiens].
Length = 340
Score = 80.9 bits (198), Expect = 2e-15
Identities = 49/127 (38%), Positives = 67/127 (52%), Gaps = 3/127 (2%)
Frame = +2
Query: 140 NGIFHNSIWLEQAAG--VYHREARSGKYKLTYAEAKAVCEYEGGRLATYKQLEAARKIGF 313
NGI S+ L + V+ + G+Y+ Y EAK CE + GRLATY QL A G
Sbjct: 132 NGIEDESVALTLSLEGVVFPYQPSRGRYQFNYYEAKQACEEQDGRLATYSQLYQAWTEGL 191
Query: 314 HVCAAGWMAKGRVGYPIVKPGPNC-GFGKTGIIDYGVRLNRSERWDAYCYNLHAKECGGV 490
C AGW+ +G V YP++ C G G+ GI YG R +R+DA+C+ + G V
Sbjct: 192 DWCNAGWLLEGSVRYPVLTARAPCGGRGRPGIRSYGPRDRMRDRYDAFCFT--SALAGQV 249
Query: 491 FTDPKRI 511
F P R+
Sbjct: 250 FFVPGRL 256
Score = 53.9 bits (128), Expect = 2e-07
Identities = 30/83 (36%), Positives = 39/83 (46%), Gaps = 2/83 (2%)
Frame = +2
Query: 218 KLTYAEAKAVCEYEGGRLATYKQLEAARKI-GFHVCAAGWMAKGRVGYPIVKPGPNC-GF 391
+LT +EA A C G +A L AA K G C GW+A G V +PI P P C G
Sbjct: 255 RLTLSEAHAACRRRGAVVAKVGHLYAAWKFSGLDQCDGGWLADGSVRFPITTPRPRCGGL 314
Query: 392 GKTGIIDYGVRLNRSERWDAYCY 460
G+ +G + + YCY
Sbjct: 315 PDPGVRSFGFPRPQQAAYGTYCY 337
>ref|NP_006120.1| bone morphogenetic protein 1 isoform 3 precursor [Homo sapiens].
Length = 986
Score = 79.3 bits (194), Expect = 5e-15
Identities = 33/96 (34%), Positives = 58/96 (60%)
Frame = +2
Query: 479 CGGVFTDPKRIFKSPGFPNEYDDNQICYWHIRLKYGQRIHVSFLNFDLEDDPACLADYVE 658
CGG +SP +P++Y +++C W I++ G + ++F +F++E +C DY+E
Sbjct: 435 CGGDVKKDYGHIQSPNYPDDYRPSKVCIWRIQVSEGFHVGLTFQSFEIERHDSCAYDYLE 494
Query: 659 IYDSYDDVHGFVGRYCGAELPEDIISTGNVMTLKFL 766
+ D + + +GRYCG E P+DI ST + + LKF+
Sbjct: 495 VRDGHSESSTLIGRYCGYEKPDDIKSTSSRLWLKFV 530
Score = 74.3 bits (181), Expect = 2e-13
Identities = 31/95 (32%), Positives = 53/95 (55%)
Frame = +2
Query: 479 CGGVFTDPKRIFKSPGFPNEYDDNQICYWHIRLKYGQRIHVSFLNFDLEDDPACLADYVE 658
C T SP +P++Y + C W I G R+ ++F+ D+E P C D++E
Sbjct: 747 CDHKVTSTSGTITSPNWPDKYPSKKECTWAISSTPGHRVKLTFMEMDIESQPECAYDHLE 806
Query: 659 IYDSYDDVHGFVGRYCGAELPEDIISTGNVMTLKF 763
++D D +GR+CG++ PE +++TG+ M L+F
Sbjct: 807 VFDGRDAKAPVLGRFCGSKKPEPVLATGSRMFLRF 841
Score = 71.2 bits (173), Expect = 1e-12
Identities = 34/95 (35%), Positives = 52/95 (54%)
Frame = +2
Query: 479 CGGVFTDPKRIFKSPGFPNEYDDNQICYWHIRLKYGQRIHVSFLNFDLEDDPACLADYVE 658
CG D F SP +PN Y + C W I + G++I ++F + DL C DYVE
Sbjct: 322 CGETLQDSTGNFSSPEYPNGYSAHMHCVWRISVTPGEKIILNFTSLDLYRSRLCWYDYVE 381
Query: 659 IYDSYDDVHGFVGRYCGAELPEDIISTGNVMTLKF 763
+ D + GR+CG++LPE I+ST + + ++F
Sbjct: 382 VRDGFWRKAPLRGRFCGSKLPEPIVSTDSRLWVEF 416
Score = 68.2 bits (165), Expect = 1e-11
Identities = 35/103 (33%), Positives = 54/103 (52%), Gaps = 4/103 (3%)
Frame = +2
Query: 467 HAKECGGVF---TDPKRIFKSPGF-PNEYDDNQICYWHIRLKYGQRIHVSFLNFDLEDDP 634
HA ECGG K ++ F N Y C W I + G + + F F++E++
Sbjct: 856 HATECGGQVRADVKTKDLYSHAQFGDNNYPGGVDCEWVIVAEEGYGVELVFQTFEVEEET 915
Query: 635 ACLADYVEIYDSYDDVHGFVGRYCGAELPEDIISTGNVMTLKF 763
C DY+E++D YD +GRYCG+ PE++ S G+ + +KF
Sbjct: 916 DCGYDYMELFDGYDSTAPRLGRYCGSGPPEEVYSAGDSVLVKF 958
Score = 63.5 bits (153), Expect = 3e-10
Identities = 33/95 (34%), Positives = 46/95 (48%)
Frame = +2
Query: 479 CGGVFTDPKRIFKSPGFPNEYDDNQICYWHIRLKYGQRIHVSFLNFDLEDDPACLADYVE 658
CGG T SPG+P EY N+ C W + RI + F F+ E + C D+VE
Sbjct: 591 CGGFLTKLNGSITSPGWPKEYPPNKNCIWQLVAPTQYRISLQFDFFETEGNDVCKYDFVE 650
Query: 659 IYDSYDDVHGFVGRYCGAELPEDIISTGNVMTLKF 763
+ G++CG+E PE I S N M ++F
Sbjct: 651 VRSGLTADSKLHGKFCGSEKPEVITSQYNNMRVEF 685
>ref|NP_001190.1| bone morphogenetic protein 1 isoform 1 precursor [Homo sapiens].
Length = 730
Score = 79.3 bits (194), Expect = 5e-15
Identities = 33/96 (34%), Positives = 58/96 (60%)
Frame = +2
Query: 479 CGGVFTDPKRIFKSPGFPNEYDDNQICYWHIRLKYGQRIHVSFLNFDLEDDPACLADYVE 658
CGG +SP +P++Y +++C W I++ G + ++F +F++E +C DY+E
Sbjct: 435 CGGDVKKDYGHIQSPNYPDDYRPSKVCIWRIQVSEGFHVGLTFQSFEIERHDSCAYDYLE 494
Query: 659 IYDSYDDVHGFVGRYCGAELPEDIISTGNVMTLKFL 766
+ D + + +GRYCG E P+DI ST + + LKF+
Sbjct: 495 VRDGHSESSTLIGRYCGYEKPDDIKSTSSRLWLKFV 530
Score = 71.2 bits (173), Expect = 1e-12
Identities = 34/95 (35%), Positives = 52/95 (54%)
Frame = +2
Query: 479 CGGVFTDPKRIFKSPGFPNEYDDNQICYWHIRLKYGQRIHVSFLNFDLEDDPACLADYVE 658
CG D F SP +PN Y + C W I + G++I ++F + DL C DYVE
Sbjct: 322 CGETLQDSTGNFSSPEYPNGYSAHMHCVWRISVTPGEKIILNFTSLDLYRSRLCWYDYVE 381
Query: 659 IYDSYDDVHGFVGRYCGAELPEDIISTGNVMTLKF 763
+ D + GR+CG++LPE I+ST + + ++F
Sbjct: 382 VRDGFWRKAPLRGRFCGSKLPEPIVSTDSRLWVEF 416
Score = 63.5 bits (153), Expect = 3e-10
Identities = 33/95 (34%), Positives = 46/95 (48%)
Frame = +2
Query: 479 CGGVFTDPKRIFKSPGFPNEYDDNQICYWHIRLKYGQRIHVSFLNFDLEDDPACLADYVE 658
CGG T SPG+P EY N+ C W + RI + F F+ E + C D+VE
Sbjct: 591 CGGFLTKLNGSITSPGWPKEYPPNKNCIWQLVAPTQYRISLQFDFFETEGNDVCKYDFVE 650
Query: 659 IYDSYDDVHGFVGRYCGAELPEDIISTGNVMTLKF 763
+ G++CG+E PE I S N M ++F
Sbjct: 651 VRSGLTADSKLHGKFCGSEKPEVITSQYNNMRVEF 685
>ref|NP_075378.1| hyaluronan and proteoglycan link protein 4 precursor [Homo
sapiens].
Length = 402
Score = 78.2 bits (191), Expect = 1e-14
Identities = 45/110 (40%), Positives = 60/110 (54%), Gaps = 12/110 (10%)
Frame = +2
Query: 167 LEQAAGVYHREARSGKYKLTYAEAKAVCEYEGGRLATYKQLEAARKIGFHVCAAGWMAKG 346
LE YH R G+YKLT+AEA+ C + G LA+ +QL AA + G C AGW+ G
Sbjct: 160 LEGVVFPYH--PRGGRYKLTFAEAQRACAEQDGILASAEQLHAAWRDGLDWCNAGWLRDG 217
Query: 347 RVGYPIVKPGPNC-GFGKT-----------GIIDYGVRLNRSERWDAYCY 460
V YP+ +P C G G T G+ +YG R N ER+DA+C+
Sbjct: 218 SVQYPVNRPREPCGGLGGTGSAGGGGDANGGLRNYGYRHNAEERYDAFCF 267
>ref|NP_001072.2| cubilin precursor [Homo sapiens].
Length = 3623
Score = 76.3 bits (186), Expect = 4e-14
Identities = 37/96 (38%), Positives = 52/96 (54%)
Frame = +2
Query: 479 CGGVFTDPKRIFKSPGFPNEYDDNQICYWHIRLKYGQRIHVSFLNFDLEDDPACLADYVE 658
CG + T+ +SPG PN Y C WHI ++ IH+ F F LE C DY+E
Sbjct: 932 CGEILTESTGTIQSPGHPNVYPHGINCTWHILVQPNHLIHLMFETFHLEFHYNCTNDYLE 991
Query: 659 IYDSYDDVHGFVGRYCGAELPEDIISTGNVMTLKFL 766
+YD+ D +GRYCG +P + S+GN + L F+
Sbjct: 992 VYDT--DSETSLGRYCGKSIPPSLTSSGNSLMLVFV 1025
Score = 75.9 bits (185), Expect = 5e-14
Identities = 39/97 (40%), Positives = 55/97 (56%), Gaps = 1/97 (1%)
Frame = +2
Query: 479 CGGVFTDPKRIFKSPGFPNEYDDNQICYWHIRLKYGQRIHVSFLNFDLEDDPACLADYVE 658
CGG F + IF SPG+P+ Y N C W+I G R+ +SF++F LED C D+VE
Sbjct: 1738 CGGTFYMAEGIFNSPGYPDIYPPNVECVWNIVSSPGNRLQLSFISFQLEDSQDCSRDFVE 1797
Query: 659 IYDSYDDVHGFVGRYCGAELPEDIIS-TGNVMTLKFL 766
I + H VGRYCG P + S G+ + ++F+
Sbjct: 1798 IREGNATGH-LVGRYCGNSFPLNYSSIVGHTLWVRFI 1833
Score = 67.8 bits (164), Expect(2) = 6e-12
Identities = 32/98 (32%), Positives = 55/98 (56%), Gaps = 1/98 (1%)
Frame = +2
Query: 476 ECGGVFTDPKRIFKSPGFPN-EYDDNQICYWHIRLKYGQRIHVSFLNFDLEDDPACLADY 652
+CGG + +S G P Y DN C WH++ G + +SF +F+L++ C D+
Sbjct: 2335 QCGGRVPGQSGVVESIGHPTLPYRDNLFCEWHLQGLSGHYLTISFEDFNLQNSSGCEKDF 2394
Query: 653 VEIYDSYDDVHGFVGRYCGAELPEDIISTGNVMTLKFL 766
VEI+D++ +GRYCG +P+ I ++ N ++F+
Sbjct: 2395 VEIWDNHTS-GNILGRYCGNTIPDSIDTSSNTAVVRFV 2431
Score = 21.2 bits (43), Expect(2) = 6e-12
Identities = 7/14 (50%), Positives = 12/14 (85%)
Frame = +1
Query: 766 SDASVTAGGFQIQY 807
+D SVTA GF++++
Sbjct: 2432 TDGSVTASGFRLRF 2445
Score = 68.2 bits (165), Expect = 1e-11
Identities = 34/86 (39%), Positives = 48/86 (55%)
Frame = +2
Query: 509 IFKSPGFPNEYDDNQICYWHIRLKYGQRIHVSFLNFDLEDDPACLADYVEIYDSYDDVHG 688
I +S G+PN Y +NQ C W IR G ++ +FL FDLE C DY+E+YD
Sbjct: 1290 ILESIGYPNPYSENQHCNWTIRATTGNTVNYTFLAFDLEHHINCSTDYLELYDGPRQ--- 1346
Query: 689 FVGRYCGAELPEDIISTGNVMTLKFL 766
+GRYCG +LP +T + + + L
Sbjct: 1347 -MGRYCGVDLPPPGSTTSSKLQVLLL 1371
Score = 68.2 bits (165), Expect = 1e-11
Identities = 37/98 (37%), Positives = 52/98 (53%), Gaps = 2/98 (2%)
Frame = +2
Query: 479 CGG-VFTDPKRIFKSPGFPNEYDDNQICYWHIRLKYG-QRIHVSFLNFDLEDDPACLADY 652
CGG + T SP FP Y +NQ C W I+ + I +SF +F+LE C D+
Sbjct: 1620 CGGHILTSSFDTVSSPRFPANYPNNQNCSWIIQAQPPLNHITLSFTHFELERSTTCARDF 1679
Query: 653 VEIYDSYDDVHGFVGRYCGAELPEDIISTGNVMTLKFL 766
VEI D + GRYCG ++P I S + +TL+F+
Sbjct: 1680 VEILDGGHEDAPLRGRYCGTDMPHPITSFSSALTLRFV 1717
Score = 67.8 bits (164), Expect = 1e-11
Identities = 35/98 (35%), Positives = 50/98 (51%), Gaps = 3/98 (3%)
Frame = +2
Query: 479 CGGVFTDPKRIFKSPGFPNEYDDNQICYWHIRLKYGQRIHVSFLNFDLEDDPACLADYVE 658
CGG + F SPGFPN Y N+ C W+IR G I ++ +FD+E C D +E
Sbjct: 1391 CGGELSGATGSFSSPGFPNRYPPNKECIWYIRTDPGSSIQLTIHDFDVEYHSRCNFDVLE 1450
Query: 659 IYDSYDDVHGFVGRYCGAELPED---IISTGNVMTLKF 763
IY D + + C PE+ + STGN + ++F
Sbjct: 1451 IYGGPDFHSPRIAQLCTQRSPENPMQVSSTGNELAIRF 1488
Score = 67.8 bits (164), Expect = 1e-11
Identities = 38/109 (34%), Positives = 55/109 (50%), Gaps = 5/109 (4%)
Frame = +2
Query: 479 CGGVFTDPKRIFKSPGFPNE--YDDNQICYWHIRLKYGQRIHVSFLNFDLEDDPA---CL 643
CGG T F SP + YD N C W I + IH++F F LE CL
Sbjct: 3157 CGGYLTGSNNTFASPDSDSNGMYDKNLNCVWIIIAPVNKVIHLTFNTFALEAASTRQRCL 3216
Query: 644 ADYVEIYDSYDDVHGFVGRYCGAELPEDIISTGNVMTLKFLVMLP*QQE 790
DYV++YD + G +CG+ +P IS+GN +T++F+ L ++E
Sbjct: 3217 YDYVKLYDGDSENANLAGTFCGSTVPAPFISSGNFLTVQFISDLTLERE 3265
Score = 67.0 bits (162), Expect = 2e-11
Identities = 32/94 (34%), Positives = 46/94 (48%)
Frame = +2
Query: 479 CGGVFTDPKRIFKSPGFPNEYDDNQICYWHIRLKYGQRIHVSFLNFDLEDDPACLADYVE 658
CGG T F SP +P Y + CYW ++ +G + F +F LE P C DY+
Sbjct: 1165 CGGNLTTSSGTFISPNYPMPYYHSSECYWWLKSSHGSAFELEFKDFHLEHHPNCTLDYLA 1224
Query: 659 IYDSYDDVHGFVGRYCGAELPEDIISTGNVMTLK 760
+YD + + CG E P I S+G+ M +K
Sbjct: 1225 VYDGPSSNSHLLTQLCGDEKPPLIRSSGDSMFIK 1258
Score = 65.9 bits (159), Expect = 5e-11
Identities = 34/96 (35%), Positives = 49/96 (51%), Gaps = 1/96 (1%)
Frame = +2
Query: 479 CGGVFTDPKRIFKSPGFPNEYDDNQICYWHIRLKYGQRIHVSFLNFDLEDDPACLADYVE 658
CGG+F P SP +P+ Y N C W IR+ R+ ++F +FDLE +C +
Sbjct: 1510 CGGIFQAPSGEIHSPNYPSPYRSNTDCSWVIRVDRNHRVLLNFTDFDLEPQDSC----IM 1565
Query: 659 IYDSYDDVHGFVGRYCGAE-LPEDIISTGNVMTLKF 763
YD + R CG E L I+S+GN + L+F
Sbjct: 1566 AYDGLSSTMSRLARTCGREQLANPIVSSGNSLFLRF 1601
Score = 63.5 bits (153), Expect = 3e-10
Identities = 38/99 (38%), Positives = 51/99 (51%), Gaps = 1/99 (1%)
Frame = +2
Query: 470 AKECGGVFTDPKRIFKSPGFPNEYDDNQICYWHIRLKYGQRIHVSFLNFDLEDDPA-CLA 646
A C +TD F SP FPN Y +N C + I ++ GQ I V F NF LE+
Sbjct: 1045 ATACLQDYTDDLGTFTSPNFPNNYPNNWECIYRITVRTGQLIAVHFTNFSLEEAIGNYYT 1104
Query: 647 DYVEIYDSYDDVHGFVGRYCGAELPEDIISTGNVMTLKF 763
D++EI D + +G + G+ LP IIS N + LKF
Sbjct: 1105 DFLEIRDGGYEKSPLLGIFYGSNLPPTIISHSNKLWLKF 1143
Score = 59.7 bits (143), Expect = 4e-09
Identities = 30/96 (31%), Positives = 51/96 (53%), Gaps = 1/96 (1%)
Frame = +2
Query: 479 CGGVFTDPKRIFKSPGFPN-EYDDNQICYWHIRLKYGQRIHVSFLNFDLEDDPACLADYV 655
CGGVF I SP + +Y ++ C + I + + I + F +FD+ +C DY+
Sbjct: 3037 CGGVFNFSSGIITSPAYSYADYPNDMHCLYTITVSDDKVIELKFSDFDVVPSTSCSHDYL 3096
Query: 656 EIYDSYDDVHGFVGRYCGAELPEDIISTGNVMTLKF 763
IYD + +G++CG++ P ++ S+ N M L F
Sbjct: 3097 AIYDGANTSDPLLGKFCGSKRPPNVKSSNNSMLLVF 3132
Score = 57.8 bits (138), Expect = 1e-08
Identities = 33/107 (30%), Positives = 49/107 (45%), Gaps = 5/107 (4%)
Frame = +2
Query: 458 YNLHAKECGGVF----TDPKRIFKSPGFPNEYDDNQICYWHIRLKYGQRIHVSFLN-FDL 622
Y + CGG D SP P+ Y + C W + RI + F + FD+
Sbjct: 2210 YEAKSLACGGNVYIHDADSAGYVTSPNHPHNYPPHADCIWILAAPPETRIQLQFEDRFDI 2269
Query: 623 EDDPACLADYVEIYDSYDDVHGFVGRYCGAELPEDIISTGNVMTLKF 763
E P C ++Y+E+ D D + ++CG LP S+G VM L+F
Sbjct: 2270 EVTPNCTSNYLELRDGVDSDAPILSKFCGTSLPSSQWSSGEVMYLRF 2316
Score = 57.4 bits (137), Expect = 2e-08
Identities = 31/103 (30%), Positives = 46/103 (44%), Gaps = 4/103 (3%)
Frame = +2
Query: 467 HAK----ECGGVFTDPKRIFKSPGFPNEYDDNQICYWHIRLKYGQRIHVSFLNFDLEDDP 634
HAK +CGG+ + SP +PN YD C + G I ++F +FD+E
Sbjct: 2681 HAKYSFTDCGGIQIGDSGVITSPNYPNAYDSLTHCSSLLEAPQGHTITLTFSDFDIEPHT 2740
Query: 635 ACLADYVEIYDSYDDVHGFVGRYCGAELPEDIISTGNVMTLKF 763
C D V + + +G+YCG P I S N + + F
Sbjct: 2741 TCAWDSVTVRNGGSPESPIIGQYCGNSNPRTIQSGSNQLVVTF 2783
Score = 57.0 bits (136), Expect = 2e-08
Identities = 26/96 (27%), Positives = 47/96 (48%), Gaps = 1/96 (1%)
Frame = +2
Query: 479 CGGVFTDPKRIFKSPGFPNEYDDNQICYWHIRLKYGQRIHVSFLNFDLEDDPACLADYVE 658
CGG + F SPG+P Y +N C W + G+ + ++F ++D C+ +Y+
Sbjct: 3511 CGGTLYGDRGSFTSPGYPGTYPNNTYCEWVLVAPAGRLVTINFYFISIDDPGDCVQNYLT 3570
Query: 659 IYDSYDDVHGFVGRYCGAELP-EDIISTGNVMTLKF 763
+YD + G YCG + +++ N + +KF
Sbjct: 3571 LYDGPNASSPSSGPYCGGDTSIAPFVASSNQVFIKF 3606
Score = 53.5 bits (127), Expect = 3e-07
Identities = 36/152 (23%), Positives = 66/152 (43%), Gaps = 5/152 (3%)
Frame = +2
Query: 311 FHVCAAGWMAKG---RVGYPIVKPGPNCGFGKTGIIDYGVRLNRSERWDAYCYNLHAKEC 481
F C +GW + + P N G G+ + R W + + C
Sbjct: 417 FCKCDSGWTGVNCTENINECLSNPCLNGGTCVDGVDSFSCECTRL--WTGALCQVPQQVC 474
Query: 482 GGVFTDPKRIF--KSPGFPNEYDDNQICYWHIRLKYGQRIHVSFLNFDLEDDPACLADYV 655
G + F +SP +D N C+W I+ + G+ + ++F F LE C +++
Sbjct: 475 GESLSGINGSFSYRSPDVGYVHDVN--CFWVIKTEMGKVLRITFTFFRLESMDNCPHEFL 532
Query: 656 EIYDSYDDVHGFVGRYCGAELPEDIISTGNVM 751
++YD +GR+CG+ LP +++S+ N +
Sbjct: 533 QVYDGDSSSAFQLGRFCGSSLPHELLSSDNAL 564
Score = 52.8 bits (125), Expect = 5e-07
Identities = 23/83 (27%), Positives = 44/83 (53%)
Frame = +2
Query: 515 KSPGFPNEYDDNQICYWHIRLKYGQRIHVSFLNFDLEDDPACLADYVEIYDSYDDVHGFV 694
+SPG+P+ YD+++ C + I + F + +E+ C D++E+ + + +
Sbjct: 3407 RSPGWPDNYDNDKDCTVTLTAPQNHTISLFFHSLGIENSVECRNDFLEVRNGSNSNSPLL 3466
Query: 695 GRYCGAELPEDIISTGNVMTLKF 763
G+YCG LP + S N + L+F
Sbjct: 3467 GKYCGTLLPNPVFSQNNELYLRF 3489
Score = 52.4 bits (124), Expect = 6e-07
Identities = 31/96 (32%), Positives = 45/96 (46%)
Frame = +2
Query: 479 CGGVFTDPKRIFKSPGFPNEYDDNQICYWHIRLKYGQRIHVSFLNFDLEDDPACLADYVE 658
CG T + + +SP FPN Y + C W I Q I ++F F++ C DYVE
Sbjct: 817 CGDELTG-EGVIRSPFFPNVYPGERTCRWTIHQPQSQVILLNFTVFEIGSSAHCETDYVE 875
Query: 659 IYDSYDDVHGFVGRYCGAELPEDIISTGNVMTLKFL 766
I S +YCG ++P I S N + + F+
Sbjct: 876 IGSSSILGSPENKKYCGTDIPSFITSVYNFLYVTFV 911
Score = 52.4 bits (124), Expect = 6e-07
Identities = 29/98 (29%), Positives = 47/98 (47%), Gaps = 1/98 (1%)
Frame = +2
Query: 473 KECGGVFTDPKRIFKSPGFPNEYDDNQICYWHIRLKYGQRIHVSFLNFDLEDDPACLADY 652
+ECGG F SP +PN +IC W I G+RI + F N L P+C ++
Sbjct: 2450 EECGGDLQGSIGTFTSPNYPNPNPHGRICEWRITAPEGRRITLMFNNLRLATHPSCNNEH 2509
Query: 653 VEIYDSYDDVHGFVGRYCGA-ELPEDIISTGNVMTLKF 763
V +++ + + C + + +I S+GN M + F
Sbjct: 2510 VIVFNGIRSNSPQLEKLCSSVNVSNEIKSSGNTMKVIF 2547
Score = 52.0 bits (123), Expect = 8e-07
Identities = 28/96 (29%), Positives = 41/96 (42%)
Frame = +2
Query: 476 ECGGVFTDPKRIFKSPGFPNEYDDNQICYWHIRLKYGQRIHVSFLNFDLEDDPACLADYV 655
ECGG+ T P KSPG+P Y + C W + + +F LE C DY+
Sbjct: 589 ECGGILTGPYGSIKSPGYPGNYPPGRDCVWIVVTSPDLLVTFTFGTLSLEHHDDCNKDYL 648
Query: 656 EIYDSYDDVHGFVGRYCGAELPEDIISTGNVMTLKF 763
EI D +G++C + +TG + F
Sbjct: 649 EIRDGPLYQDPLLGKFCTTFSVPPLQTTGPFARIHF 684
Score = 49.7 bits (117), Expect = 4e-06
Identities = 26/82 (31%), Positives = 36/82 (43%)
Frame = +2
Query: 518 SPGFPNEYDDNQICYWHIRLKYGQRIHVSFLNFDLEDDPACLADYVEIYDSYDDVHGFVG 697
SP +P Y N W + + +H L D+E+ C D + IYD +G
Sbjct: 1865 SPFWPENYPHNSNYQWTVNVNASHVVHGRILEMDIEEIQNCYYDKLRIYDGPSIHARLIG 1924
Query: 698 RYCGAELPEDIISTGNVMTLKF 763
YCG + E STGN +T F
Sbjct: 1925 AYCGTQ-TESFSSTGNSLTFHF 1945
Score = 49.7 bits (117), Expect = 4e-06
Identities = 29/97 (29%), Positives = 46/97 (47%), Gaps = 2/97 (2%)
Frame = +2
Query: 479 CGGVFT--DPKRIFKSPGFPNEYDDNQICYWHIRLKYGQRIHVSFLNFDLEDDPACLADY 652
CGG D SPG+P+ Y + C W I+ + ++ L+ D+E C D
Sbjct: 1978 CGGFLRTGDAPVFLFSPGWPDSYSNRVDCTWLIQAP-DSTVELNILSLDIESHRTCAYDS 2036
Query: 653 VEIYDSYDDVHGFVGRYCGAELPEDIISTGNVMTLKF 763
+ I D +++ + CG E+P I STG M ++F
Sbjct: 2037 LVIRDGDNNLAQQLAVLCGREIPGPIRSTGEYMFIRF 2073
Score = 48.9 bits (115), Expect = 7e-06
Identities = 29/95 (30%), Positives = 43/95 (45%), Gaps = 4/95 (4%)
Frame = +2
Query: 479 CGGVFTDPKRIFKSPGFPNEYDDNQICYWHIRLKYGQRIHVSFLNFDLEDDPA----CLA 646
CG FT P SP +P +YD+N C + I + ++F++F LE A C+
Sbjct: 2920 CGSNFTGPSGYIISPNYPKQYDNNMNCTYVIEANPLSVVLLTFVSFHLEARSAVTGSCVN 2979
Query: 647 DYVEIYDSYDDVHGFVGRYCGAELPEDIISTGNVM 751
D V I Y + CG E+P + G V+
Sbjct: 2980 DGVHIIRGYSVMSTPFATVCGDEMPAPLTIAGPVL 3014
>ref|NP_036596.3| tolloid-like protein 1 isoform 1 precursor [Homo sapiens].
Length = 1013
Score = 75.1 bits (183), Expect = 9e-14
Identities = 37/95 (38%), Positives = 50/95 (52%)
Frame = +2
Query: 479 CGGVFTDPKRIFKSPGFPNEYDDNQICYWHIRLKYGQRIHVSFLNFDLEDDPACLADYVE 658
CGG+ T +PG+P EY N+ C W + RI V F F+LE + C DYVE
Sbjct: 618 CGGLLTKLNGTITTPGWPKEYPPNKNCVWQVVAPTQYRISVKFEFFELEGNEVCKYDYVE 677
Query: 659 IYDSYDDVHGFVGRYCGAELPEDIISTGNVMTLKF 763
I+ G++CGAE+PE I S N M ++F
Sbjct: 678 IWSGLSSESKLHGKFCGAEVPEVITSQFNNMRIEF 712
Score = 73.9 bits (180), Expect = 2e-13
Identities = 30/97 (30%), Positives = 54/97 (55%)
Frame = +2
Query: 476 ECGGVFTDPKRIFKSPGFPNEYDDNQICYWHIRLKYGQRIHVSFLNFDLEDDPACLADYV 655
EC P + SP +P++Y + C W I G RI ++F F++E C D++
Sbjct: 773 ECEQKIHSPSGLITSPNWPDKYPSRKECTWEISATPGHRIKLAFSEFEIEQHQECAYDHL 832
Query: 656 EIYDSYDDVHGFVGRYCGAELPEDIISTGNVMTLKFL 766
E++D + +GR CG ++P+ +++TGN M ++F+
Sbjct: 833 EVFDGETEKSPILGRLCGNKIPDPLVATGNKMFVRFV 869
Score = 72.4 bits (176), Expect = 6e-13
Identities = 31/96 (32%), Positives = 53/96 (55%)
Frame = +2
Query: 479 CGGVFTDPKRIFKSPGFPNEYDDNQICYWHIRLKYGQRIHVSFLNFDLEDDPACLADYVE 658
CGG + +SP +P++Y + C W I + + ++F +F++E C DY+E
Sbjct: 462 CGGEIRKNEGQIQSPNYPDDYRPMKECVWKITVSESYHVGLTFQSFEIERHDNCAYDYLE 521
Query: 659 IYDSYDDVHGFVGRYCGAELPEDIISTGNVMTLKFL 766
+ D + +GR+CG + PEDI ST N + +KF+
Sbjct: 522 VRDGTSENSPLIGRFCGYDKPEDIRSTSNTLWMKFV 557
Score = 71.2 bits (173), Expect = 1e-12
Identities = 33/95 (34%), Positives = 49/95 (51%)
Frame = +2
Query: 479 CGGVFTDPKRIFKSPGFPNEYDDNQICYWHIRLKYGQRIHVSFLNFDLEDDPACLADYVE 658
CG + SPGFPN Y C W + + G++I ++F DL C DY+E
Sbjct: 349 CGETLQESNGNLSSPGFPNGYPSYTHCIWRVSVTPGEKIVLNFTTMDLYKSSLCWYDYIE 408
Query: 659 IYDSYDDVHGFVGRYCGAELPEDIISTGNVMTLKF 763
+ D Y +GR+CG +LPE + ST + M ++F
Sbjct: 409 VRDGYWRKSPLLGRFCGDKLPEVLTSTDSRMWIEF 443
Score = 67.4 bits (163), Expect = 2e-11
Identities = 34/103 (33%), Positives = 56/103 (54%), Gaps = 4/103 (3%)
Frame = +2
Query: 467 HAKECGGVF---TDPKRIFKSPGF-PNEYDDNQICYWHIRLKYGQRIHVSFLNFDLEDDP 634
H+ ECGG + P+ ++ F N Y C W + + G R+ +SF F++E++
Sbjct: 883 HSTECGGRLKAESKPRDLYSHAQFGDNNYPGQVDCEWLLVSERGSRLELSFQTFEVEEEA 942
Query: 635 ACLADYVEIYDSYDDVHGFVGRYCGAELPEDIISTGNVMTLKF 763
C DYVE++D D +GR+CG+ PE+I S G+ + + F
Sbjct: 943 DCGYDYVELFDGLDSTAVGLGRFCGSGPPEEIYSIGDSVLIHF 985
>ref|NP_443128.2| CUB and sushi domain-containing protein 2 [Homo sapiens].
Length = 3487
Score = 73.9 bits (180), Expect = 2e-13
Identities = 39/108 (36%), Positives = 56/108 (51%)
Frame = +2
Query: 440 RWDAYCYNLHAKECGGVFTDPKRIFKSPGFPNEYDDNQICYWHIRLKYGQRIHVSFLNFD 619
RW+ Y L +CGG + + + SPGFP Y N C W I L G H+ FLNF
Sbjct: 1956 RWN-YPPPLCIAQCGGTVEEMEGVILSPGFPGNYPSNMDCSWKIALPVGFGAHIQFLNFS 2014
Query: 620 LEDDPACLADYVEIYDSYDDVHGFVGRYCGAELPEDIISTGNVMTLKF 763
E + DY+EI + + +GR+ G+ELP ++ST + T+ F
Sbjct: 2015 TEPN----HDYIEIRNGPYETSRMMGRFSGSELPSSLLSTSHETTVYF 2058
Score = 55.8 bits (133), Expect(2) = 2e-08
Identities = 30/95 (31%), Positives = 46/95 (48%)
Frame = +2
Query: 479 CGGVFTDPKRIFKSPGFPNEYDDNQICYWHIRLKYGQRIHVSFLNFDLEDDPACLADYVE 658
CGG T P + SP +P Y + C W + + I + F F+LE D++
Sbjct: 1445 CGGDLTGPSGVILSPNYPEPYPPGKECDWKVTVSPDYVIALVFNIFNLEPG----YDFLH 1500
Query: 659 IYDSYDDVHGFVGRYCGAELPEDIISTGNVMTLKF 763
IYD D + +G + G++LP I S+ N + L F
Sbjct: 1501 IYDGRDSLSPLIGSFYGSQLPGRIESSSNSLFLAF 1535
Score = 21.2 bits (43), Expect(2) = 2e-08
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = +1
Query: 754 LEIPSDASVTAGGFQIQY 807
L SDASV+ GF I Y
Sbjct: 1533 LAFRSDASVSNAGFVIDY 1550
Score = 56.6 bits (135), Expect = 3e-08
Identities = 37/111 (33%), Positives = 52/111 (46%), Gaps = 1/111 (0%)
Frame = +2
Query: 434 SERWDAYCYNLHAKE-CGGVFTDPKRIFKSPGFPNEYDDNQICYWHIRLKYGQRIHVSFL 610
S WD + A + CGG I SP FP+EY +N C W I + G I + F+
Sbjct: 186 SATWDFPLPSCRADDACGGTLRGQSGIISSPHFPSEYHNNADCTWTILAELGDTIALVFI 245
Query: 611 NFDLEDDPACLADYVEIYDSYDDVHGFVGRYCGAELPEDIISTGNVMTLKF 763
+F LED D++E+ G + GA LP +IS+ N + L F
Sbjct: 246 DFQLEDG----YDFLEV----TGTEGSSLWFTGASLPAPVISSKNWLRLHF 288
Score = 54.7 bits (130), Expect = 1e-07
Identities = 29/91 (31%), Positives = 47/91 (51%)
Frame = +2
Query: 491 FTDPKRIFKSPGFPNEYDDNQICYWHIRLKYGQRIHVSFLNFDLEDDPACLADYVEIYDS 670
FT P + SP +P +Y ++ C W I + RIH++F + D+E D++ I D
Sbjct: 582 FTSPSGVVLSPNYPEDYGNHLHCVWLILARPESRIHLAFNDIDVEPQ----FDFLVIKDG 637
Query: 671 YDDVHGFVGRYCGAELPEDIISTGNVMTLKF 763
+G + G +LP I S+G+V L+F
Sbjct: 638 ATAEAPVLGTFSGNQLPSSITSSGHVARLEF 668
Score = 54.3 bits (129), Expect = 2e-07
Identities = 32/95 (33%), Positives = 45/95 (47%)
Frame = +2
Query: 479 CGGVFTDPKRIFKSPGFPNEYDDNQICYWHIRLKYGQRIHVSFLNFDLEDDPACLADYVE 658
CGG T P SPG+P Y D C W I + G I ++F F E + D +E
Sbjct: 752 CGGHLTSPSGTILSPGWPGFYKDALSCAWVIEAQPGYPIKITFDRFKTEVN----YDTLE 807
Query: 659 IYDSYDDVHGFVGRYCGAELPEDIISTGNVMTLKF 763
+ D +G Y G ++P+ +IST N + L F
Sbjct: 808 VRDGRTYSAPLIGVYHGTQVPQFLISTSNYLYLLF 842
Score = 53.1 bits (126), Expect = 4e-07
Identities = 29/95 (30%), Positives = 47/95 (49%)
Frame = +2
Query: 479 CGGVFTDPKRIFKSPGFPNEYDDNQICYWHIRLKYGQRIHVSFLNFDLEDDPACLADYVE 658
CGG T+ + SPGFP Y ++ C W I + G I + ++F E + D +E
Sbjct: 1796 CGGNLTERRGTILSPGFPEPYLNSLNCVWKIVVPEGAGIQIQVVSFVTEQN----WDSLE 1851
Query: 659 IYDSYDDVHGFVGRYCGAELPEDIISTGNVMTLKF 763
++D D+ +G + G +P + ST N + L F
Sbjct: 1852 VFDGADNTVTMLGSFSGTTVPALLNSTSNQLYLHF 1886
Score = 50.8 bits (120), Expect = 2e-06
Identities = 45/150 (30%), Positives = 63/150 (42%), Gaps = 11/150 (7%)
Frame = +2
Query: 347 RVGYPIVKPGPNCGFGKTGIIDYGVRLNRSER----------WDAYCYNLHAKECGG-VF 493
+ GY + G G + D G L SE WD A ECGG V
Sbjct: 1218 KFGYKVHDEGHFAGSSVSFSCDPGYSLRGSEELLCLSGERRTWDRPLPTCVA-ECGGTVR 1276
Query: 494 TDPKRIFKSPGFPNEYDDNQICYWHIRLKYGQRIHVSFLNFDLEDDPACLADYVEIYDSY 673
+ SPG+P Y+ N C W I + G I + FL FD E+ + D + I+D
Sbjct: 1277 GEVSGQVLSPGYPAPYEHNLNCIWTIEAEAGCTIGLHFLVFDTEE----VHDVLRIWDGP 1332
Query: 674 DDVHGFVGRYCGAELPEDIISTGNVMTLKF 763
+ + G LP+D+ ST N + L+F
Sbjct: 1333 VESGVLLKELSGPALPKDLHSTFNSVVLQF 1362
Database: RefSeq49_HP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,297,164
Number of sequences in database: 32,964
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 32964
Number of Hits to DB: 35,969,423
Number of extensions: 890608
Number of successful extensions: 2474
Number of sequences better than 1.0e-05: 75
Number of HSP's gapped: 2396
Number of HSP's successfully gapped: 187
Length of query: 320
Length of database: 18,297,164
Length adjustment: 103
Effective length of query: 217
Effective length of database: 14,901,872
Effective search space: 3233706224
Effective search space used: 3233706224
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)
Search to Sscrofa10_2
BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-013305
(960 letters)
Database: Sscrofa_10.2.fasta
4582 sequences; 2,808,509,378 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Sscrofa_Chr15 460 e-127
>Sscrofa_Chr15
|| Length = 157681621
Score = 460 bits (232), Expect = e-127
Identities = 232/232 (100%)
Strand = Plus / Plus
Query: 470 gcaaaagagtgtggtggtgtctttacagatccaaaacgaatttttaaatctccaggcttc 529
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 102264 gcaaaagagtgtggtggtgtctttacagatccaaaacgaatttttaaatctccaggcttc 102323
Query: 530 ccaaatgagtatgatgataaccaaatctgctactggcacattagacttaagtatggccag 589
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 102324 ccaaatgagtatgatgataaccaaatctgctactggcacattagacttaagtatggccag 102383
Query: 590 cgtattcacgtgagttttttgaactttgaccttgaagatgatccagcttgcttggctgac 649
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 102384 cgtattcacgtgagttttttgaactttgaccttgaagatgatccagcttgcttggctgac 102443
Query: 650 tatgttgaaatatacgacagttacgacgacgtccatggctttgtgggaaggt 701
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 102444 tatgttgaaatatacgacagttacgacgacgtccatggctttgtgggaaggt 102495
Score = 460 bits (232), Expect = e-127
Identities = 232/232 (100%)
Strand = Plus / Minus
Query: 470 gcaaaagagtgtggtggtgtctttacagatccaaaacgaatttttaaatctccaggcttc 529
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 157139883 gcaaaagagtgtggtggtgtctttacagatccaaaacgaatttttaaatctccaggcttc 157139824
Query: 530 ccaaatgagtatgatgataaccaaatctgctactggcacattagacttaagtatggccag 589
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 157139823 ccaaatgagtatgatgataaccaaatctgctactggcacattagacttaagtatggccag 157139764
Query: 590 cgtattcacgtgagttttttgaactttgaccttgaagatgatccagcttgcttggctgac 649
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 157139763 cgtattcacgtgagttttttgaactttgaccttgaagatgatccagcttgcttggctgac 157139704
Query: 650 tatgttgaaatatacgacagttacgacgacgtccatggctttgtgggaaggt 701
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 157139703 tatgttgaaatatacgacagttacgacgacgtccatggctttgtgggaaggt 157139652
Score = 337 bits (170), Expect = 7e-90
Identities = 170/170 (100%)
Strand = Plus / Plus
Query: 1 agacacatttcagcttctgctctgagaatttatcctgagcagcccttaacaggctattcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 90407 agacacatttcagcttctgctctgagaatttatcctgagcagcccttaacaggctattcc 90466
Query: 61 tcctctacaactagagatgatcatcttaatttacttatttgtcttcctgtgggaagaggc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 90467 tcctctacaactagagatgatcatcttaatttacttatttgtcttcctgtgggaagaggc 90526
Query: 121 tcacggatggggattcaaaaacggaatttttcataactccatatggcttg 170
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 90527 tcacggatggggattcaaaaacggaatttttcataactccatatggcttg 90576
Score = 337 bits (170), Expect = 7e-90
Identities = 170/170 (100%)
Strand = Plus / Minus
Query: 1 agacacatttcagcttctgctctgagaatttatcctgagcagcccttaacaggctattcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 157151740 agacacatttcagcttctgctctgagaatttatcctgagcagcccttaacaggctattcc 157151681
Query: 61 tcctctacaactagagatgatcatcttaatttacttatttgtcttcctgtgggaagaggc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 157151680 tcctctacaactagagatgatcatcttaatttacttatttgtcttcctgtgggaagaggc 157151621
Query: 121 tcacggatggggattcaaaaacggaatttttcataactccatatggcttg 170
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 157151620 tcacggatggggattcaaaaacggaatttttcataactccatatggcttg 157151571
Score = 323 bits (163), Expect = 1e-85
Identities = 163/163 (100%)
Strand = Plus / Plus
Query: 308 ggatttcatgtctgtgctgctgggtggatggctaagggcagagttggctaccccattgta 367
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 97880 ggatttcatgtctgtgctgctgggtggatggctaagggcagagttggctaccccattgta 97939
Query: 368 aagccaggtcccaactgtggatttggaaaaaccggtattattgattatggagtccgtctc 427
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 97940 aagccaggtcccaactgtggatttggaaaaaccggtattattgattatggagtccgtctc 97999
Query: 428 aacagaagcgaaagatgggatgcttattgctacaacctacatg 470
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 98000 aacagaagcgaaagatgggatgcttattgctacaacctacatg 98042
Score = 323 bits (163), Expect = 1e-85
Identities = 163/163 (100%)
Strand = Plus / Minus
Query: 308 ggatttcatgtctgtgctgctgggtggatggctaagggcagagttggctaccccattgta 367
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 157144267 ggatttcatgtctgtgctgctgggtggatggctaagggcagagttggctaccccattgta 157144208
Query: 368 aagccaggtcccaactgtggatttggaaaaaccggtattattgattatggagtccgtctc 427
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 157144207 aagccaggtcccaactgtggatttggaaaaaccggtattattgattatggagtccgtctc 157144148
Query: 428 aacagaagcgaaagatgggatgcttattgctacaacctacatg 470
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 157144147 aacagaagcgaaagatgggatgcttattgctacaacctacatg 157144105
Score = 278 bits (140), Expect = 5e-72
Identities = 140/140 (100%)
Strand = Plus / Plus
Query: 170 gaacaagcggcaggcgtgtaccacagagaagcacggtcgggcaagtacaagcttacctac 229
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 96203 gaacaagcggcaggcgtgtaccacagagaagcacggtcgggcaagtacaagcttacctac 96262
Query: 230 gcagaggcgaaagcggtgtgtgaatacgaaggtggccgtcttgccacctacaagcagtta 289
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 96263 gcagaggcgaaagcggtgtgtgaatacgaaggtggccgtcttgccacctacaagcagtta 96322
Query: 290 gaggcagccagaaaaattgg 309
||||||||||||||||||||
Sbjct: 96323 gaggcagccagaaaaattgg 96342
Score = 278 bits (140), Expect = 5e-72
Identities = 140/140 (100%)
Strand = Plus / Minus
Query: 170 gaacaagcggcaggcgtgtaccacagagaagcacggtcgggcaagtacaagcttacctac 229
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 157145944 gaacaagcggcaggcgtgtaccacagagaagcacggtcgggcaagtacaagcttacctac 157145885
Query: 230 gcagaggcgaaagcggtgtgtgaatacgaaggtggccgtcttgccacctacaagcagtta 289
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 157145884 gcagaggcgaaagcggtgtgtgaatacgaaggtggccgtcttgccacctacaagcagtta 157145825
Query: 290 gaggcagccagaaaaattgg 309
||||||||||||||||||||
Sbjct: 157145824 gaggcagccagaaaaattgg 157145805
Score = 240 bits (121), Expect = 1e-60
Identities = 165/173 (95%), Gaps = 5/173 (2%)
Strand = Plus / Minus
Query: 738 caggaaatgtcatgaccttgaaattccta-gtgatgcttccgtgacagcaggaggtttcc 796
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 83504 caggaaatgtcatgaccttgaaattcctaagtgatgcttccgtgacagcaggaggtttcc 83445
Query: 797 aaatccaatatgttgccgtggaccccctctcaaaaaccagtcagggaaagaa-accacta 855
||||| |||||||||| ||||||||||||||||||||||||||||||||||| || ||||
Sbjct: 83444 aaatcaaatatgttgcagtggaccccctctcaaaaaccagtcagggaaagaatacaacta 83385
Query: 856 ctacttctactggaaat-aaagc-ttttagctggaaga-ttagccatttataa 905
||||||||||||||||| ||||| |||||||||||||| ||||||||||||||
Sbjct: 83384 ctacttctactggaaataaaagctttttagctggaagatttagccatttataa 83332
Score = 240 bits (121), Expect = 1e-60
Identities = 165/173 (95%), Gaps = 5/173 (2%)
Strand = Plus / Minus
Query: 738 caggaaatgtcatgaccttgaaattccta-gtgatgcttccgtgacagcaggaggtttcc 796
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 157133054 caggaaatgtcatgaccttgaaattcctaagtgatgcttccgtgacagcaggaggtttcc 157132995
Query: 797 aaatccaatatgttgccgtggaccccctctcaaaaaccagtcagggaaagaa-accacta 855
||||| |||||||||| ||||||||||||||||||||||||||||||||||| || ||||
Sbjct: 157132994 aaatcaaatatgttgcagtggaccccctctcaaaaaccagtcagggaaagaatacaacta 157132935
Query: 856 ctacttctactggaaat-aaagc-ttttagctggaaga-ttagccatttataa 905
||||||||||||||||| ||||| |||||||||||||| ||||||||||||||
Sbjct: 157132934 ctacttctactggaaataaaagctttttagctggaagatttagccatttataa 157132882
Score = 89.7 bits (45), Expect = 3e-15
Identities = 48/49 (97%)
Strand = Plus / Minus
Query: 698 aggtactgtggagctgaacttccagaagacatcattagtacaggaaatg 746
|||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 157137079 aggtactgtggagctgaacttccagaagacatcattagtacaggtaatg 157137031
Database: Sscrofa_10.2.fasta
Posted date: Nov 16, 2011 10:34 AM
Number of letters in database: 2,808,509,378
Number of sequences in database: 4582
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4582
Number of Hits to DB: 31,114,757
Number of extensions: 212
Number of successful extensions: 212
Number of sequences better than 1.0e-05: 1
Number of HSP's gapped: 208
Number of HSP's successfully gapped: 11
Length of query: 960
Length of database: 2,808,509,378
Length adjustment: 21
Effective length of query: 939
Effective length of database: 2,808,413,156
Effective search space: 2637099953484
Effective search space used: 2637099953484
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 18 (36.2 bits)
S2: 29 (58.0 bits)