Search to RefSeqBP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-013307
(1837 letters)
Database: RefSeq49_BP.fasta
33,088 sequences; 17,681,374 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001179974.1| glucose-6-phosphate translocase isoform 2 [B... 729 0.0
Alignment gi|NP_001192279.1| glucose-6-phosphate translocase isoform 1 [B... 717 0.0
Alignment gi|XP_001253041.1| PREDICTED: solute carrier family 37 (glucose... 717 0.0
Alignment gi|NP_001068752.1| sugar phosphate exchanger 3 [Bos taurus]. 66 1e-10
>ref|NP_001179974.1| glucose-6-phosphate translocase isoform 2 [Bos taurus].
Length = 429
Score = 729 bits (1883), Expect = 0.0
Identities = 366/429 (85%), Positives = 373/429 (86%)
Frame = +1
Query: 478 MAARGYGYYRAVIFSAMFGGYSLYYFNRKTFSFVMPSLVEEIRLDKDDLGLITSSQSAAY 657
MAARGYGYYR VIFSAMFGGYSLYYFNRKTFSFVMPSLVEEI LDKDDLGLITSSQSAAY
Sbjct: 1 MAARGYGYYRTVIFSAMFGGYSLYYFNRKTFSFVMPSLVEEIPLDKDDLGLITSSQSAAY 60
Query: 658 AISKFVSGVLSDQMSARWLFXXXXXXXXXXNVIFSWSSTVPVFAALWFLNGLAQGLGWPP 837
AISKFVSGVLSDQMSARWLF N++FSWSS VPVFAALWFLNGLAQGLGWPP
Sbjct: 61 AISKFVSGVLSDQMSARWLFSSGLLLVGLVNIVFSWSSAVPVFAALWFLNGLAQGLGWPP 120
Query: 838 CGKILRKWFEPSQFGTWWAILSTSMNLAGGLGPILATILAQSYSWRSTLALSGAXXXXXX 1017
CGK+LRKWFEPSQFGTWWAILSTSMNLAGGLGPILATILAQSYSWR+TLALSGA
Sbjct: 121 CGKVLRKWFEPSQFGTWWAILSTSMNLAGGLGPILATILAQSYSWRATLALSGALCVAVS 180
Query: 1018 XXXXXXIHNEPADVGLRNLDPIPXXXXXXXXXXXXTLQELLLTPYLWVLSIGYLVVFGVK 1197
I NEPADVGL+NLDP P TLQELLLTPYLWVLS GYLVVFGVK
Sbjct: 181 FLCLLLIRNEPADVGLQNLDPTPSKGKKGSSKEESTLQELLLTPYLWVLSTGYLVVFGVK 240
Query: 1198 TCCTDWGQFFLIQEKGQSALVGSSYMSALEVGGLVGSIAAGYLSDRAMAKAGLSIHGNPR 1377
TCCTDWGQFFLIQE+GQSALVGSSYMSALEVGGLVGSIAAGYLSDRAMAKAGLSI+GNPR
Sbjct: 241 TCCTDWGQFFLIQERGQSALVGSSYMSALEVGGLVGSIAAGYLSDRAMAKAGLSIYGNPR 300
Query: 1378 HXXXXXXXXXXXXXXYLFRVTVTSDSPKLWILVLGAVFGFSSYGPIALFGVIANESAPPN 1557
H YLFR TVTSDSPKLWILVLGAVFGFSSYGPIALFGVIANE APPN
Sbjct: 301 HGLLLFMMAGMTASMYLFRATVTSDSPKLWILVLGAVFGFSSYGPIALFGVIANECAPPN 360
Query: 1558 LCGTSHAIVGLMANVGGFLAGLPFSTIAKHYSWSTAFWVAEVICAASTGAFFLLRNIRTK 1737
LCGTSHAIVGLMANVGGFLAGLPFSTIAKHYSWSTAFWVAEVICAASTGAFFLLRNIRTK
Sbjct: 361 LCGTSHAIVGLMANVGGFLAGLPFSTIAKHYSWSTAFWVAEVICAASTGAFFLLRNIRTK 420
Query: 1738 MGRVPKKAE 1764
MGRVPKKAE
Sbjct: 421 MGRVPKKAE 429
>ref|NP_001192279.1| glucose-6-phosphate translocase isoform 1 [Bos taurus].
Length = 451
Score = 717 bits (1850), Expect = 0.0
Identities = 366/451 (81%), Positives = 373/451 (82%), Gaps = 22/451 (4%)
Frame = +1
Query: 478 MAARGYGYYRAVIFSAMFGGYSLYYFNRKTFSFVMPSLVEEIRLDKDDLGLITSSQSAAY 657
MAARGYGYYR VIFSAMFGGYSLYYFNRKTFSFVMPSLVEEI LDKDDLGLITSSQSAAY
Sbjct: 1 MAARGYGYYRTVIFSAMFGGYSLYYFNRKTFSFVMPSLVEEIPLDKDDLGLITSSQSAAY 60
Query: 658 AISKFVSGVLSDQMSARWLFXXXXXXXXXXNVIFSWSSTVPVFAALWFLNGLAQGLGWPP 837
AISKFVSGVLSDQMSARWLF N++FSWSS VPVFAALWFLNGLAQGLGWPP
Sbjct: 61 AISKFVSGVLSDQMSARWLFSSGLLLVGLVNIVFSWSSAVPVFAALWFLNGLAQGLGWPP 120
Query: 838 CGKILRKWFEPSQFGTWWAILSTSMNLAGGLGPILATILAQSYSWRSTLALSGAXXXXXX 1017
CGK+LRKWFEPSQFGTWWAILSTSMNLAGGLGPILATILAQSYSWR+TLALSGA
Sbjct: 121 CGKVLRKWFEPSQFGTWWAILSTSMNLAGGLGPILATILAQSYSWRATLALSGALCVAVS 180
Query: 1018 XXXXXXIHNEPADVGLRNLDPIPXXXXXXXXXXXXTLQELLLTPYLWVLSIGYLVVFGVK 1197
I NEPADVGL+NLDP P TLQELLLTPYLWVLS GYLVVFGVK
Sbjct: 181 FLCLLLIRNEPADVGLQNLDPTPSKGKKGSSKEESTLQELLLTPYLWVLSTGYLVVFGVK 240
Query: 1198 TCCTDWGQFFLIQEKGQSALVGSSYMSALEVGGLVGSIAAGYLSDRAMAKAGLSIHGNPR 1377
TCCTDWGQFFLIQE+GQSALVGSSYMSALEVGGLVGSIAAGYLSDRAMAKAGLSI+GNPR
Sbjct: 241 TCCTDWGQFFLIQERGQSALVGSSYMSALEVGGLVGSIAAGYLSDRAMAKAGLSIYGNPR 300
Query: 1378 HXXXXXXXXXXXXXXYLFRVTVTSDSPK----------------------LWILVLGAVF 1491
H YLFR TVTSDSPK LWILVLGAVF
Sbjct: 301 HGLLLFMMAGMTASMYLFRATVTSDSPKDTAFWTPALHPLAEITGFTENELWILVLGAVF 360
Query: 1492 GFSSYGPIALFGVIANESAPPNLCGTSHAIVGLMANVGGFLAGLPFSTIAKHYSWSTAFW 1671
GFSSYGPIALFGVIANE APPNLCGTSHAIVGLMANVGGFLAGLPFSTIAKHYSWSTAFW
Sbjct: 361 GFSSYGPIALFGVIANECAPPNLCGTSHAIVGLMANVGGFLAGLPFSTIAKHYSWSTAFW 420
Query: 1672 VAEVICAASTGAFFLLRNIRTKMGRVPKKAE 1764
VAEVICAASTGAFFLLRNIRTKMGRVPKKAE
Sbjct: 421 VAEVICAASTGAFFLLRNIRTKMGRVPKKAE 451
>ref|XP_001253041.1| PREDICTED: solute carrier family 37 (glucose-6-phosphate
transporter), member 4 [Bos taurus].
Length = 451
Score = 717 bits (1850), Expect = 0.0
Identities = 366/451 (81%), Positives = 373/451 (82%), Gaps = 22/451 (4%)
Frame = +1
Query: 478 MAARGYGYYRAVIFSAMFGGYSLYYFNRKTFSFVMPSLVEEIRLDKDDLGLITSSQSAAY 657
MAARGYGYYR VIFSAMFGGYSLYYFNRKTFSFVMPSLVEEI LDKDDLGLITSSQSAAY
Sbjct: 1 MAARGYGYYRTVIFSAMFGGYSLYYFNRKTFSFVMPSLVEEIPLDKDDLGLITSSQSAAY 60
Query: 658 AISKFVSGVLSDQMSARWLFXXXXXXXXXXNVIFSWSSTVPVFAALWFLNGLAQGLGWPP 837
AISKFVSGVLSDQMSARWLF N++FSWSS VPVFAALWFLNGLAQGLGWPP
Sbjct: 61 AISKFVSGVLSDQMSARWLFSSGLLLVGLVNIVFSWSSAVPVFAALWFLNGLAQGLGWPP 120
Query: 838 CGKILRKWFEPSQFGTWWAILSTSMNLAGGLGPILATILAQSYSWRSTLALSGAXXXXXX 1017
CGK+LRKWFEPSQFGTWWAILSTSMNLAGGLGPILATILAQSYSWR+TLALSGA
Sbjct: 121 CGKVLRKWFEPSQFGTWWAILSTSMNLAGGLGPILATILAQSYSWRATLALSGALCVAVS 180
Query: 1018 XXXXXXIHNEPADVGLRNLDPIPXXXXXXXXXXXXTLQELLLTPYLWVLSIGYLVVFGVK 1197
I NEPADVGL+NLDP P TLQELLLTPYLWVLS GYLVVFGVK
Sbjct: 181 FLCLLLIRNEPADVGLQNLDPTPSKGKKGSSKEESTLQELLLTPYLWVLSTGYLVVFGVK 240
Query: 1198 TCCTDWGQFFLIQEKGQSALVGSSYMSALEVGGLVGSIAAGYLSDRAMAKAGLSIHGNPR 1377
TCCTDWGQFFLIQE+GQSALVGSSYMSALEVGGLVGSIAAGYLSDRAMAKAGLSI+GNPR
Sbjct: 241 TCCTDWGQFFLIQERGQSALVGSSYMSALEVGGLVGSIAAGYLSDRAMAKAGLSIYGNPR 300
Query: 1378 HXXXXXXXXXXXXXXYLFRVTVTSDSPK----------------------LWILVLGAVF 1491
H YLFR TVTSDSPK LWILVLGAVF
Sbjct: 301 HGLLLFMMAGMTASMYLFRATVTSDSPKDTAFWTPALHPLAEITGFTENELWILVLGAVF 360
Query: 1492 GFSSYGPIALFGVIANESAPPNLCGTSHAIVGLMANVGGFLAGLPFSTIAKHYSWSTAFW 1671
GFSSYGPIALFGVIANE APPNLCGTSHAIVGLMANVGGFLAGLPFSTIAKHYSWSTAFW
Sbjct: 361 GFSSYGPIALFGVIANECAPPNLCGTSHAIVGLMANVGGFLAGLPFSTIAKHYSWSTAFW 420
Query: 1672 VAEVICAASTGAFFLLRNIRTKMGRVPKKAE 1764
VAEVICAASTGAFFLLRNIRTKMGRVPKKAE
Sbjct: 421 VAEVICAASTGAFFLLRNIRTKMGRVPKKAE 451
>ref|NP_001068752.1| sugar phosphate exchanger 3 [Bos taurus].
Length = 495
Score = 65.9 bits (159), Expect = 1e-10
Identities = 65/344 (18%), Positives = 125/344 (36%), Gaps = 58/344 (16%)
Frame = +1
Query: 493 YGYYRAVIFSAMFGGYSLYYFNRKTFSFVMPSLVEE--------------IRLDKDD--- 621
+ ++ V+F F YSL + +RKTFS V S+ ++ + + +
Sbjct: 16 FSHHHMVVFLLTFFSYSLLHASRKTFSNVKVSISKQWTPSAFNKSTELLPVEIWSSNHLF 75
Query: 622 ---------LGLITSSQSAAYAISKFVSGVLSDQMSARWLFXXXXXXXXXXNVIFSWSS- 771
LG++ + +YA+ F+SG++ D+++ RW+ +F +
Sbjct: 76 PSAEEATLFLGMLDTIFLFSYAVGLFISGIVGDRLNLRWVLSFGMCSSALVVFVFGTLTE 135
Query: 772 -----TVPVFAALWFLNGLAQGLGWPPCGKILRKWFEPSQFGTWWAILSTSMNLAGGLGP 936
++ +LW +NGL Q GWP ++ WF + G + + S ++ LG
Sbjct: 136 WLHFYNKGLYCSLWIVNGLLQSTGWPCVVAVMGNWFGKAGRGVVFGLWSACASVGNILGA 195
Query: 937 ILATILAQSYSWRSTLALSGAXXXXXXXXXXXXIHNEPADVGLRNLDP------------ 1080
LA+ + Q Y + ++ A + P ++G+ ++
Sbjct: 196 CLASSVLQ-YGYEYAFLVTAAVQFAGGIIIFFGLLVSPEEIGIPGIETEDNFEEDSHRPL 254
Query: 1081 IPXXXXXXXXXXXXTLQE--------------LLLTPYLWVLSIGYLVVFGVKTCCTDWG 1218
I ++QE P + S+ Y + V W
Sbjct: 255 INGAENEDEAEPNYSIQEGNTVTQVKAISFYQACCLPGVIAYSLAYACLKLVNYSFFFWL 314
Query: 1219 QFFLIQEKGQSALVGSSYMSALEVGGLVGSIAAGYLSDRAMAKA 1350
F+L G +VGG++G G++SD +A
Sbjct: 315 PFYLSNNFGWKEAEADQLSIWYDVGGIIGGTLQGFISDMLQKRA 358
Database: RefSeq49_BP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 17,681,374
Number of sequences in database: 33,088
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33088
Number of Hits to DB: 81,785,290
Number of extensions: 2620538
Number of successful extensions: 9583
Number of sequences better than 1.0e-05: 4
Number of HSP's gapped: 9542
Number of HSP's successfully gapped: 5
Length of query: 612
Length of database: 17,681,374
Length adjustment: 108
Effective length of query: 504
Effective length of database: 14,107,870
Effective search space: 7110366480
Effective search space used: 7110366480
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Animal-Genome cDNA 20110601C-013307
Search to RefSeqCP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-013307
(1837 letters)
Database: RefSeq49_CP.fasta
33,336 sequences; 18,874,504 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_859969.1| PREDICTED: similar to Glucose 6-phosphate trans... 731 0.0
Alignment gi|XP_860117.1| PREDICTED: similar to Glucose 6-phosphate trans... 726 0.0
Alignment gi|XP_860047.1| PREDICTED: similar to Glucose 6-phosphate trans... 724 0.0
Alignment gi|XP_546493.2| PREDICTED: similar to Glucose 6-phosphate trans... 718 0.0
Alignment gi|XP_860158.1| PREDICTED: similar to Glucose 6-phosphate trans... 714 0.0
Alignment gi|XP_860083.1| PREDICTED: similar to Glucose 6-phosphate trans... 714 0.0
Alignment gi|XP_860195.1| PREDICTED: similar to Glucose 6-phosphate trans... 491 e-152
Alignment gi|XP_860007.1| PREDICTED: similar to Glucose 6-phosphate trans... 117 4e-26
Alignment gi|XP_539884.2| PREDICTED: similar to solute carrier family 37 ... 65 2e-10
>ref|XP_859969.1| PREDICTED: similar to Glucose 6-phosphate translocase (Glucose
5-phosphate transporter) (Solute carrier family 37,
member 4) isoform 3 [Canis familiaris].
Length = 429
Score = 731 bits (1887), Expect = 0.0
Identities = 367/429 (85%), Positives = 373/429 (86%)
Frame = +1
Query: 478 MAARGYGYYRAVIFSAMFGGYSLYYFNRKTFSFVMPSLVEEIRLDKDDLGLITSSQSAAY 657
MAA+GYGYYR VIFSAMFGGYSLYYFNRKTFSFVMPSLVEEI LDKDDLGLITSSQSAAY
Sbjct: 1 MAAQGYGYYRTVIFSAMFGGYSLYYFNRKTFSFVMPSLVEEIPLDKDDLGLITSSQSAAY 60
Query: 658 AISKFVSGVLSDQMSARWLFXXXXXXXXXXNVIFSWSSTVPVFAALWFLNGLAQGLGWPP 837
AISKFVSGVLSDQMSARWLF N++FSWSS VPVFAALWFLNGLAQGLGWPP
Sbjct: 61 AISKFVSGVLSDQMSARWLFSSGLLLVGLVNIVFSWSSLVPVFAALWFLNGLAQGLGWPP 120
Query: 838 CGKILRKWFEPSQFGTWWAILSTSMNLAGGLGPILATILAQSYSWRSTLALSGAXXXXXX 1017
CGKILRKWFEPSQFGTWWAILSTSMNLAGGLGPILATILAQSYSWRSTLALSGA
Sbjct: 121 CGKILRKWFEPSQFGTWWAILSTSMNLAGGLGPILATILAQSYSWRSTLALSGALCVVVS 180
Query: 1018 XXXXXXIHNEPADVGLRNLDPIPXXXXXXXXXXXXTLQELLLTPYLWVLSIGYLVVFGVK 1197
IHNEPADVGLRNLDP P TLQELLL+PYLWVLS GYLVVFGVK
Sbjct: 181 FLCLLLIHNEPADVGLRNLDPTPSKGKKGSLKDESTLQELLLSPYLWVLSTGYLVVFGVK 240
Query: 1198 TCCTDWGQFFLIQEKGQSALVGSSYMSALEVGGLVGSIAAGYLSDRAMAKAGLSIHGNPR 1377
TCCTDWGQFFLIQEKGQS LVGSSYMSALEVGGLVGSIAAGYLSDRAMAKAGLS++GNPR
Sbjct: 241 TCCTDWGQFFLIQEKGQSVLVGSSYMSALEVGGLVGSIAAGYLSDRAMAKAGLSVYGNPR 300
Query: 1378 HXXXXXXXXXXXXXXYLFRVTVTSDSPKLWILVLGAVFGFSSYGPIALFGVIANESAPPN 1557
H YLFRVTVTSDSPKLWILVLGAVFGFSSYGPIALFGVIANESAPPN
Sbjct: 301 HGLLLLMMAGMTVSMYLFRVTVTSDSPKLWILVLGAVFGFSSYGPIALFGVIANESAPPN 360
Query: 1558 LCGTSHAIVGLMANVGGFLAGLPFSTIAKHYSWSTAFWVAEVICAASTGAFFLLRNIRTK 1737
LCGTSHAIVGLMANVGGFLAGLPFSTIAKHYSWSTAFWVAEVICA ST AFFLLRNIRTK
Sbjct: 361 LCGTSHAIVGLMANVGGFLAGLPFSTIAKHYSWSTAFWVAEVICAVSTAAFFLLRNIRTK 420
Query: 1738 MGRVPKKAE 1764
MGRVPKKAE
Sbjct: 421 MGRVPKKAE 429
>ref|XP_860117.1| PREDICTED: similar to Glucose 6-phosphate translocase (Glucose
5-phosphate transporter) (Solute carrier family 37,
member 4) isoform 7 [Canis familiaris].
Length = 430
Score = 726 bits (1875), Expect = 0.0
Identities = 367/430 (85%), Positives = 373/430 (86%), Gaps = 1/430 (0%)
Frame = +1
Query: 478 MAARGYGYYRAVIFSAMFGGYSLYYFNRKTFSFVMPSLVEEIRLDKDDLGLITSSQSAAY 657
MAA+GYGYYR VIFSAMFGGYSLYYFNRKTFSFVMPSLVEEI LDKDDLGLITSSQSAAY
Sbjct: 1 MAAQGYGYYRTVIFSAMFGGYSLYYFNRKTFSFVMPSLVEEIPLDKDDLGLITSSQSAAY 60
Query: 658 AISKFVSGVLSDQMSARWLFXXXXXXXXXXNVIFSWSSTVPVFAALWFLNGLAQGLGWPP 837
AISKFVSGVLSDQMSARWLF N++FSWSS VPVFAALWFLNGLAQGLGWPP
Sbjct: 61 AISKFVSGVLSDQMSARWLFSSGLLLVGLVNIVFSWSSLVPVFAALWFLNGLAQGLGWPP 120
Query: 838 CGKILRKWFEPSQFGTWWAILSTSMNLAGGLGPILATILAQSYSWRSTLALSGAXXXXXX 1017
CGKILRKWFEPSQFGTWWAILSTSMNLAGGLGPILATILAQSYSWRSTLALSGA
Sbjct: 121 CGKILRKWFEPSQFGTWWAILSTSMNLAGGLGPILATILAQSYSWRSTLALSGALCVVVS 180
Query: 1018 XXXXXXIHNEPADVGLRNLDPIPXXXXXXXXXXXX-TLQELLLTPYLWVLSIGYLVVFGV 1194
IHNEPADVGLRNLDP P TLQELLL+PYLWVLS GYLVVFGV
Sbjct: 181 FLCLLLIHNEPADVGLRNLDPTPSKGKKAVGEGDESTLQELLLSPYLWVLSTGYLVVFGV 240
Query: 1195 KTCCTDWGQFFLIQEKGQSALVGSSYMSALEVGGLVGSIAAGYLSDRAMAKAGLSIHGNP 1374
KTCCTDWGQFFLIQEKGQS LVGSSYMSALEVGGLVGSIAAGYLSDRAMAKAGLS++GNP
Sbjct: 241 KTCCTDWGQFFLIQEKGQSVLVGSSYMSALEVGGLVGSIAAGYLSDRAMAKAGLSVYGNP 300
Query: 1375 RHXXXXXXXXXXXXXXYLFRVTVTSDSPKLWILVLGAVFGFSSYGPIALFGVIANESAPP 1554
RH YLFRVTVTSDSPKLWILVLGAVFGFSSYGPIALFGVIANESAPP
Sbjct: 301 RHGLLLLMMAGMTVSMYLFRVTVTSDSPKLWILVLGAVFGFSSYGPIALFGVIANESAPP 360
Query: 1555 NLCGTSHAIVGLMANVGGFLAGLPFSTIAKHYSWSTAFWVAEVICAASTGAFFLLRNIRT 1734
NLCGTSHAIVGLMANVGGFLAGLPFSTIAKHYSWSTAFWVAEVICA ST AFFLLRNIRT
Sbjct: 361 NLCGTSHAIVGLMANVGGFLAGLPFSTIAKHYSWSTAFWVAEVICAVSTAAFFLLRNIRT 420
Query: 1735 KMGRVPKKAE 1764
KMGRVPKKAE
Sbjct: 421 KMGRVPKKAE 430
>ref|XP_860047.1| PREDICTED: similar to Glucose 6-phosphate translocase (Glucose
5-phosphate transporter) (Solute carrier family 37,
member 4) isoform 5 [Canis familiaris].
Length = 435
Score = 724 bits (1870), Expect = 0.0
Identities = 367/435 (84%), Positives = 373/435 (85%), Gaps = 6/435 (1%)
Frame = +1
Query: 478 MAARGYGYYRAVIFSAMFGGYSLYYFNRKTFSFVMPSLVEEIRLDKDDLGLITSSQSAAY 657
MAA+GYGYYR VIFSAMFGGYSLYYFNRKTFSFVMPSLVEEI LDKDDLGLITSSQSAAY
Sbjct: 1 MAAQGYGYYRTVIFSAMFGGYSLYYFNRKTFSFVMPSLVEEIPLDKDDLGLITSSQSAAY 60
Query: 658 AISKFVSGVLSDQMSARWLFXXXXXXXXXXNVIFSWSSTVPVFAALWFLNGLAQGLGWPP 837
AISKFVSGVLSDQMSARWLF N++FSWSS VPVFAALWFLNGLAQGLGWPP
Sbjct: 61 AISKFVSGVLSDQMSARWLFSSGLLLVGLVNIVFSWSSLVPVFAALWFLNGLAQGLGWPP 120
Query: 838 CGKILRKWFEPSQFGTWWAILSTSMNLAGGLGPILATILAQSYSWRSTLALSGAXXXXXX 1017
CGKILRKWFEPSQFGTWWAILSTSMNLAGGLGPILATILAQSYSWRSTLALSGA
Sbjct: 121 CGKILRKWFEPSQFGTWWAILSTSMNLAGGLGPILATILAQSYSWRSTLALSGALCVVVS 180
Query: 1018 XXXXXXIHNEPADVGLRNLDPIPXXXXXXXXXXXX------TLQELLLTPYLWVLSIGYL 1179
IHNEPADVGLRNLDP P TLQELLL+PYLWVLS GYL
Sbjct: 181 FLCLLLIHNEPADVGLRNLDPTPSKGKKGEHPPKPITGDESTLQELLLSPYLWVLSTGYL 240
Query: 1180 VVFGVKTCCTDWGQFFLIQEKGQSALVGSSYMSALEVGGLVGSIAAGYLSDRAMAKAGLS 1359
VVFGVKTCCTDWGQFFLIQEKGQS LVGSSYMSALEVGGLVGSIAAGYLSDRAMAKAGLS
Sbjct: 241 VVFGVKTCCTDWGQFFLIQEKGQSVLVGSSYMSALEVGGLVGSIAAGYLSDRAMAKAGLS 300
Query: 1360 IHGNPRHXXXXXXXXXXXXXXYLFRVTVTSDSPKLWILVLGAVFGFSSYGPIALFGVIAN 1539
++GNPRH YLFRVTVTSDSPKLWILVLGAVFGFSSYGPIALFGVIAN
Sbjct: 301 VYGNPRHGLLLLMMAGMTVSMYLFRVTVTSDSPKLWILVLGAVFGFSSYGPIALFGVIAN 360
Query: 1540 ESAPPNLCGTSHAIVGLMANVGGFLAGLPFSTIAKHYSWSTAFWVAEVICAASTGAFFLL 1719
ESAPPNLCGTSHAIVGLMANVGGFLAGLPFSTIAKHYSWSTAFWVAEVICA ST AFFLL
Sbjct: 361 ESAPPNLCGTSHAIVGLMANVGGFLAGLPFSTIAKHYSWSTAFWVAEVICAVSTAAFFLL 420
Query: 1720 RNIRTKMGRVPKKAE 1764
RNIRTKMGRVPKKAE
Sbjct: 421 RNIRTKMGRVPKKAE 435
>ref|XP_546493.2| PREDICTED: similar to Glucose 6-phosphate translocase (Glucose
5-phosphate transporter) (Solute carrier family 37,
member 4) isoform 1 [Canis familiaris].
Length = 451
Score = 718 bits (1854), Expect = 0.0
Identities = 367/451 (81%), Positives = 373/451 (82%), Gaps = 22/451 (4%)
Frame = +1
Query: 478 MAARGYGYYRAVIFSAMFGGYSLYYFNRKTFSFVMPSLVEEIRLDKDDLGLITSSQSAAY 657
MAA+GYGYYR VIFSAMFGGYSLYYFNRKTFSFVMPSLVEEI LDKDDLGLITSSQSAAY
Sbjct: 1 MAAQGYGYYRTVIFSAMFGGYSLYYFNRKTFSFVMPSLVEEIPLDKDDLGLITSSQSAAY 60
Query: 658 AISKFVSGVLSDQMSARWLFXXXXXXXXXXNVIFSWSSTVPVFAALWFLNGLAQGLGWPP 837
AISKFVSGVLSDQMSARWLF N++FSWSS VPVFAALWFLNGLAQGLGWPP
Sbjct: 61 AISKFVSGVLSDQMSARWLFSSGLLLVGLVNIVFSWSSLVPVFAALWFLNGLAQGLGWPP 120
Query: 838 CGKILRKWFEPSQFGTWWAILSTSMNLAGGLGPILATILAQSYSWRSTLALSGAXXXXXX 1017
CGKILRKWFEPSQFGTWWAILSTSMNLAGGLGPILATILAQSYSWRSTLALSGA
Sbjct: 121 CGKILRKWFEPSQFGTWWAILSTSMNLAGGLGPILATILAQSYSWRSTLALSGALCVVVS 180
Query: 1018 XXXXXXIHNEPADVGLRNLDPIPXXXXXXXXXXXXTLQELLLTPYLWVLSIGYLVVFGVK 1197
IHNEPADVGLRNLDP P TLQELLL+PYLWVLS GYLVVFGVK
Sbjct: 181 FLCLLLIHNEPADVGLRNLDPTPSKGKKGSLKDESTLQELLLSPYLWVLSTGYLVVFGVK 240
Query: 1198 TCCTDWGQFFLIQEKGQSALVGSSYMSALEVGGLVGSIAAGYLSDRAMAKAGLSIHGNPR 1377
TCCTDWGQFFLIQEKGQS LVGSSYMSALEVGGLVGSIAAGYLSDRAMAKAGLS++GNPR
Sbjct: 241 TCCTDWGQFFLIQEKGQSVLVGSSYMSALEVGGLVGSIAAGYLSDRAMAKAGLSVYGNPR 300
Query: 1378 HXXXXXXXXXXXXXXYLFRVTVTSDSPK----------------------LWILVLGAVF 1491
H YLFRVTVTSDSPK LWILVLGAVF
Sbjct: 301 HGLLLLMMAGMTVSMYLFRVTVTSDSPKDVAFWTPALHPLAELTGFTEDELWILVLGAVF 360
Query: 1492 GFSSYGPIALFGVIANESAPPNLCGTSHAIVGLMANVGGFLAGLPFSTIAKHYSWSTAFW 1671
GFSSYGPIALFGVIANESAPPNLCGTSHAIVGLMANVGGFLAGLPFSTIAKHYSWSTAFW
Sbjct: 361 GFSSYGPIALFGVIANESAPPNLCGTSHAIVGLMANVGGFLAGLPFSTIAKHYSWSTAFW 420
Query: 1672 VAEVICAASTGAFFLLRNIRTKMGRVPKKAE 1764
VAEVICA ST AFFLLRNIRTKMGRVPKKAE
Sbjct: 421 VAEVICAVSTAAFFLLRNIRTKMGRVPKKAE 451
>ref|XP_860158.1| PREDICTED: similar to Glucose 6-phosphate translocase (Glucose
5-phosphate transporter) (Solute carrier family 37,
member 4) isoform 8 [Canis familiaris].
Length = 450
Score = 714 bits (1843), Expect = 0.0
Identities = 367/451 (81%), Positives = 373/451 (82%), Gaps = 22/451 (4%)
Frame = +1
Query: 478 MAARGYGYYRAVIFSAMFGGYSLYYFNRKTFSFVMPSLVEEIRLDKDDLGLITSSQSAAY 657
MAA+GYGYYR VIFSAMFGGYSLYYFNRKTFSFVMPSLVEEI LDKDDLGLITSSQSAAY
Sbjct: 1 MAAQGYGYYRTVIFSAMFGGYSLYYFNRKTFSFVMPSLVEEIPLDKDDLGLITSSQSAAY 60
Query: 658 AISKFVSGVLSDQMSARWLFXXXXXXXXXXNVIFSWSSTVPVFAALWFLNGLAQGLGWPP 837
AISKFVSGVLSDQMSARWLF N++FSWSS VPVFAALWFLNGLAQGLGWPP
Sbjct: 61 AISKFVSGVLSDQMSARWLFSSGLLLVGLVNIVFSWSSLVPVFAALWFLNGLAQGLGWPP 120
Query: 838 CGKILRKWFEPSQFGTWWAILSTSMNLAGGLGPILATILAQSYSWRSTLALSGAXXXXXX 1017
CGKILRKWFEPSQFGTWWAILSTSMNLAGGLGPILATILAQSYSWRSTLALSGA
Sbjct: 121 CGKILRKWFEPSQFGTWWAILSTSMNLAGGLGPILATILAQSYSWRSTLALSGALCVVVS 180
Query: 1018 XXXXXXIHNEPADVGLRNLDPIPXXXXXXXXXXXXTLQELLLTPYLWVLSIGYLVVFGVK 1197
IHNEPADVGLRNLDP P TLQELLL+PYLWVLS GYLVVFGVK
Sbjct: 181 FLCLLLIHNEPADVGLRNLDPTP-SKGKKAEPESCTLQELLLSPYLWVLSTGYLVVFGVK 239
Query: 1198 TCCTDWGQFFLIQEKGQSALVGSSYMSALEVGGLVGSIAAGYLSDRAMAKAGLSIHGNPR 1377
TCCTDWGQFFLIQEKGQS LVGSSYMSALEVGGLVGSIAAGYLSDRAMAKAGLS++GNPR
Sbjct: 240 TCCTDWGQFFLIQEKGQSVLVGSSYMSALEVGGLVGSIAAGYLSDRAMAKAGLSVYGNPR 299
Query: 1378 HXXXXXXXXXXXXXXYLFRVTVTSDSPK----------------------LWILVLGAVF 1491
H YLFRVTVTSDSPK LWILVLGAVF
Sbjct: 300 HGLLLLMMAGMTVSMYLFRVTVTSDSPKDVAFWTPALHPLAELTGFTEDELWILVLGAVF 359
Query: 1492 GFSSYGPIALFGVIANESAPPNLCGTSHAIVGLMANVGGFLAGLPFSTIAKHYSWSTAFW 1671
GFSSYGPIALFGVIANESAPPNLCGTSHAIVGLMANVGGFLAGLPFSTIAKHYSWSTAFW
Sbjct: 360 GFSSYGPIALFGVIANESAPPNLCGTSHAIVGLMANVGGFLAGLPFSTIAKHYSWSTAFW 419
Query: 1672 VAEVICAASTGAFFLLRNIRTKMGRVPKKAE 1764
VAEVICA ST AFFLLRNIRTKMGRVPKKAE
Sbjct: 420 VAEVICAVSTAAFFLLRNIRTKMGRVPKKAE 450
>ref|XP_860083.1| PREDICTED: similar to Glucose 6-phosphate translocase (Glucose
5-phosphate transporter) (Solute carrier family 37,
member 4) isoform 6 [Canis familiaris].
Length = 452
Score = 714 bits (1842), Expect = 0.0
Identities = 367/452 (81%), Positives = 373/452 (82%), Gaps = 23/452 (5%)
Frame = +1
Query: 478 MAARGYGYYRAVIFSAMFGGYSLYYFNRKTFSFVMPSLVEEIRLDKDDLGLITSSQSAAY 657
MAA+GYGYYR VIFSAMFGGYSLYYFNRKTFSFVMPSLVEEI LDKDDLGLITSSQSAAY
Sbjct: 1 MAAQGYGYYRTVIFSAMFGGYSLYYFNRKTFSFVMPSLVEEIPLDKDDLGLITSSQSAAY 60
Query: 658 AISKFVSGVLSDQMSARWLFXXXXXXXXXXNVIFSWSSTVPVFAALWFLNGLAQGLGWPP 837
AISKFVSGVLSDQMSARWLF N++FSWSS VPVFAALWFLNGLAQGLGWPP
Sbjct: 61 AISKFVSGVLSDQMSARWLFSSGLLLVGLVNIVFSWSSLVPVFAALWFLNGLAQGLGWPP 120
Query: 838 CGKILRKWFEPSQFGTWWAILSTSMNLAGGLGPILATILAQSYSWRSTLALSGAXXXXXX 1017
CGKILRKWFEPSQFGTWWAILSTSMNLAGGLGPILATILAQSYSWRSTLALSGA
Sbjct: 121 CGKILRKWFEPSQFGTWWAILSTSMNLAGGLGPILATILAQSYSWRSTLALSGALCVVVS 180
Query: 1018 XXXXXXIHNEPADVGLRNLDPIP-XXXXXXXXXXXXTLQELLLTPYLWVLSIGYLVVFGV 1194
IHNEPADVGLRNLDP P TLQELLL+PYLWVLS GYLVVFGV
Sbjct: 181 FLCLLLIHNEPADVGLRNLDPTPSKGKKAVGEGDESTLQELLLSPYLWVLSTGYLVVFGV 240
Query: 1195 KTCCTDWGQFFLIQEKGQSALVGSSYMSALEVGGLVGSIAAGYLSDRAMAKAGLSIHGNP 1374
KTCCTDWGQFFLIQEKGQS LVGSSYMSALEVGGLVGSIAAGYLSDRAMAKAGLS++GNP
Sbjct: 241 KTCCTDWGQFFLIQEKGQSVLVGSSYMSALEVGGLVGSIAAGYLSDRAMAKAGLSVYGNP 300
Query: 1375 RHXXXXXXXXXXXXXXYLFRVTVTSDSPK----------------------LWILVLGAV 1488
RH YLFRVTVTSDSPK LWILVLGAV
Sbjct: 301 RHGLLLLMMAGMTVSMYLFRVTVTSDSPKDVAFWTPALHPLAELTGFTEDELWILVLGAV 360
Query: 1489 FGFSSYGPIALFGVIANESAPPNLCGTSHAIVGLMANVGGFLAGLPFSTIAKHYSWSTAF 1668
FGFSSYGPIALFGVIANESAPPNLCGTSHAIVGLMANVGGFLAGLPFSTIAKHYSWSTAF
Sbjct: 361 FGFSSYGPIALFGVIANESAPPNLCGTSHAIVGLMANVGGFLAGLPFSTIAKHYSWSTAF 420
Query: 1669 WVAEVICAASTGAFFLLRNIRTKMGRVPKKAE 1764
WVAEVICA ST AFFLLRNIRTKMGRVPKKAE
Sbjct: 421 WVAEVICAVSTAAFFLLRNIRTKMGRVPKKAE 452
>ref|XP_860195.1| PREDICTED: similar to Glucose 6-phosphate translocase (Glucose
5-phosphate transporter) (Solute carrier family 37,
member 4) isoform 9 [Canis familiaris].
Length = 356
Score = 491 bits (1263), Expect(2) = e-152
Identities = 246/290 (84%), Positives = 250/290 (86%)
Frame = +1
Query: 478 MAARGYGYYRAVIFSAMFGGYSLYYFNRKTFSFVMPSLVEEIRLDKDDLGLITSSQSAAY 657
MAA+GYGYYR VIFSAMFGGYSLYYFNRKTFSFVMPSLVEEI LDKDDLGLITSSQSAAY
Sbjct: 1 MAAQGYGYYRTVIFSAMFGGYSLYYFNRKTFSFVMPSLVEEIPLDKDDLGLITSSQSAAY 60
Query: 658 AISKFVSGVLSDQMSARWLFXXXXXXXXXXNVIFSWSSTVPVFAALWFLNGLAQGLGWPP 837
AISKFVSGVLSDQMSARWLF N++FSWSS VPVFAALWFLNGLAQGLGWPP
Sbjct: 61 AISKFVSGVLSDQMSARWLFSSGLLLVGLVNIVFSWSSLVPVFAALWFLNGLAQGLGWPP 120
Query: 838 CGKILRKWFEPSQFGTWWAILSTSMNLAGGLGPILATILAQSYSWRSTLALSGAXXXXXX 1017
CGKILRKWFEPSQFGTWWAILSTSMNLAGGLGPILATILAQSYSWRSTLALSGA
Sbjct: 121 CGKILRKWFEPSQFGTWWAILSTSMNLAGGLGPILATILAQSYSWRSTLALSGALCVVVS 180
Query: 1018 XXXXXXIHNEPADVGLRNLDPIPXXXXXXXXXXXXTLQELLLTPYLWVLSIGYLVVFGVK 1197
IHNEPADVGLRNLDP P TLQELLL+PYLWVLS GYLVVFGVK
Sbjct: 181 FLCLLLIHNEPADVGLRNLDPTPSKGKKGSLKDESTLQELLLSPYLWVLSTGYLVVFGVK 240
Query: 1198 TCCTDWGQFFLIQEKGQSALVGSSYMSALEVGGLVGSIAAGYLSDRAMAK 1347
TCCTDWGQFFLIQEKGQS LVGSSYMSALEVGGLVGSIAAGYLSDRAMAK
Sbjct: 241 TCCTDWGQFFLIQEKGQSVLVGSSYMSALEVGGLVGSIAAGYLSDRAMAK 290
Score = 68.9 bits (167), Expect(2) = e-152
Identities = 27/36 (75%), Positives = 29/36 (80%)
Frame = +3
Query: 1341 GKGRAVHPREPPPWPAAAHDGWHDSIHVPLPGNCDQ 1448
G GRAV EP PWP AAHDGWHD +HVPLPG+CDQ
Sbjct: 321 GTGRAVRVWEPSPWPVAAHDGWHDRVHVPLPGHCDQ 356
>ref|XP_860007.1| PREDICTED: similar to Glucose 6-phosphate translocase (Glucose
5-phosphate transporter) (Solute carrier family 37,
member 4) isoform 4 [Canis familiaris].
Length = 58
Score = 117 bits (293), Expect = 4e-26
Identities = 56/58 (96%), Positives = 56/58 (96%)
Frame = +1
Query: 1591 MANVGGFLAGLPFSTIAKHYSWSTAFWVAEVICAASTGAFFLLRNIRTKMGRVPKKAE 1764
MANVGGFLAGLPFSTIAKHYSWSTAFWVAEVICA ST AFFLLRNIRTKMGRVPKKAE
Sbjct: 1 MANVGGFLAGLPFSTIAKHYSWSTAFWVAEVICAVSTAAFFLLRNIRTKMGRVPKKAE 58
>ref|XP_539884.2| PREDICTED: similar to solute carrier family 37 (glycerol-3-phosphate
transporter), member 3 isoform 1 [Canis familiaris].
Length = 534
Score = 65.1 bits (157), Expect = 2e-10
Identities = 68/343 (19%), Positives = 123/343 (35%), Gaps = 57/343 (16%)
Frame = +1
Query: 493 YGYYRAVIFSAMFGGYSLYYFNRKTFSFVMPSLVEE---------IRLDKDD-------- 621
+ ++ V+F F YSL + +RKTFS V S+ ++ I L +
Sbjct: 16 FSHHHVVVFLLTFFSYSLLHASRKTFSNVKVSISKQWTPSAFNKSINLPVEIWSSNHLFP 75
Query: 622 --------LGLITSSQSAAYAISKFVSGVLSDQMSARWLFXXXXXXXXXXNVIFSWSS-- 771
LG + + +YA+ F+SG++ D+++ RW+ +F +
Sbjct: 76 SAEEATLFLGTLDTIFLFSYAVGLFISGIVGDRLNLRWVLSFGMCSSALVVFVFGTVTEW 135
Query: 772 ----TVPVFAALWFLNGLAQGLGWPPCGKILRKWFEPSQFGTWWAILSTSMNLAGGLGPI 939
++ LW +NGL Q GWP ++ WF + G + + S ++ LG
Sbjct: 136 LHFYNKGLYCCLWIVNGLLQSTGWPCVVAVMGNWFGKAGRGVVFGLWSACASVGNILGAC 195
Query: 940 LATILAQSYSWRSTLALSGAXXXXXXXXXXXXIHNEPADVGLRNLDP------------I 1083
LA+ + Q Y + ++ A + P ++GL ++ I
Sbjct: 196 LASSVLQ-YGYEYAFLVTAAVQFAGGIIIFFGLLVSPEEIGLPGIEAEENFEEDSHRPLI 254
Query: 1084 PXXXXXXXXXXXXTLQE--------------LLLTPYLWVLSIGYLVVFGVKTCCTDWGQ 1221
++QE P + S+ Y + V W
Sbjct: 255 NDAENEDEYEPNYSIQEGSTITQVKAISFYQACCLPGVIPYSLAYACLKLVNYSFFFWLP 314
Query: 1222 FFLIQEKGQSALVGSSYMSALEVGGLVGSIAAGYLSDRAMAKA 1350
F+L G +VGG++G G++SD +A
Sbjct: 315 FYLSNNFGWKEAEADKLSIWYDVGGIIGGTLQGFISDVLQKRA 357
Database: RefSeq49_CP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,874,504
Number of sequences in database: 33,336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33336
Number of Hits to DB: 85,285,220
Number of extensions: 2698589
Number of successful extensions: 9992
Number of sequences better than 1.0e-05: 9
Number of HSP's gapped: 9940
Number of HSP's successfully gapped: 11
Length of query: 612
Length of database: 18,874,504
Length adjustment: 109
Effective length of query: 503
Effective length of database: 15,240,880
Effective search space: 7666162640
Effective search space used: 7666162640
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to RefSeqSP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-013307
(1837 letters)
Database: RefSeq49_SP.fasta
24,897 sequences; 11,343,932 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001186648.1| glucose-6-phosphate translocase [Sus scrofa]. 750 0.0
Alignment gi|XP_003361810.1| PREDICTED: sugar phosphate exchanger 3-like,... 50 4e-06
>ref|NP_001186648.1| glucose-6-phosphate translocase [Sus scrofa].
Length = 429
Score = 750 bits (1937), Expect = 0.0
Identities = 379/429 (88%), Positives = 381/429 (88%)
Frame = +1
Query: 478 MAARGYGYYRAVIFSAMFGGYSLYYFNRKTFSFVMPSLVEEIRLDKDDLGLITSSQSAAY 657
MAARGYGYYRAVIFSAMFGGYSLYYFNRKTFSFVMPSLVEEIRLDKDDLGLITSSQSAAY
Sbjct: 1 MAARGYGYYRAVIFSAMFGGYSLYYFNRKTFSFVMPSLVEEIRLDKDDLGLITSSQSAAY 60
Query: 658 AISKFVSGVLSDQMSARWLFXXXXXXXXXXNVIFSWSSTVPVFAALWFLNGLAQGLGWPP 837
AISKFVSGVLSDQMSARWLF NVIFSWSSTVPVFAALWFLNGLA+GLGWPP
Sbjct: 61 AISKFVSGVLSDQMSARWLFSSGLLLVGLVNVIFSWSSTVPVFAALWFLNGLARGLGWPP 120
Query: 838 CGKILRKWFEPSQFGTWWAILSTSMNLAGGLGPILATILAQSYSWRSTLALSGAXXXXXX 1017
CGKILRKWFEPSQFGTWWAILSTSMNLAGGLGPILATILAQSYSWRSTLALSGA
Sbjct: 121 CGKILRKWFEPSQFGTWWAILSTSMNLAGGLGPILATILAQSYSWRSTLALSGALCVVVS 180
Query: 1018 XXXXXXIHNEPADVGLRNLDPIPXXXXXXXXXXXXTLQELLLTPYLWVLSIGYLVVFGVK 1197
IHNEPADVGLRNLDPIP TLQELLLTPYLWVLSIGYLVVFGVK
Sbjct: 181 FLCLLLIHNEPADVGLRNLDPIPSKGKKGSSKEESTLQELLLTPYLWVLSIGYLVVFGVK 240
Query: 1198 TCCTDWGQFFLIQEKGQSALVGSSYMSALEVGGLVGSIAAGYLSDRAMAKAGLSIHGNPR 1377
TCCTDWGQFFLIQEKGQSALVGSSYMSALEVGGLVGSIAAGYLSDRAMA+AGLSIHGNPR
Sbjct: 241 TCCTDWGQFFLIQEKGQSALVGSSYMSALEVGGLVGSIAAGYLSDRAMAEAGLSIHGNPR 300
Query: 1378 HXXXXXXXXXXXXXXYLFRVTVTSDSPKLWILVLGAVFGFSSYGPIALFGVIANESAPPN 1557
H YLFRVTVTSDSPKLWILVLGAVFGFSSYGPIALFGVIANESAPPN
Sbjct: 301 HGLLLLMMAGMTASMYLFRVTVTSDSPKLWILVLGAVFGFSSYGPIALFGVIANESAPPN 360
Query: 1558 LCGTSHAIVGLMANVGGFLAGLPFSTIAKHYSWSTAFWVAEVICAASTGAFFLLRNIRTK 1737
LCGTSHAIVGLMANVGGFLAGLPFSTIAKHYSWSTAFWVAEVICAASTGAFFLLRNIRTK
Sbjct: 361 LCGTSHAIVGLMANVGGFLAGLPFSTIAKHYSWSTAFWVAEVICAASTGAFFLLRNIRTK 420
Query: 1738 MGRVPKKAE 1764
MGRVPKKAE
Sbjct: 421 MGRVPKKAE 429
>ref|XP_003361810.1| PREDICTED: sugar phosphate exchanger 3-like, partial [Sus scrofa].
Length = 174
Score = 50.1 bits (118), Expect = 4e-06
Identities = 40/170 (23%), Positives = 66/170 (38%), Gaps = 39/170 (22%)
Frame = +1
Query: 472 PTMAARG-----YGYYRAVIFSAMFGGYSLYYFNRKTFSFVMPSL--------------- 591
P + RG + ++ V+F F YSL + +RKTFS V S+
Sbjct: 4 PNILQRGTLLSRFSHHHVVVFLLTFFSYSLLHASRKTFSNVKVSISKQWTPSAFNKSVDL 63
Query: 592 -------------VEEIRLDKDDLGLITSSQSAAYAISKFVSGVLSDQMSARWLFXXXXX 732
EE L LG + + +YA+ F+SG++ D+++ R +
Sbjct: 64 PVEIWSRNRLFPSAEEATLF---LGTLDTVFLFSYAVGLFISGIIGDRLNLRLVLSFGMC 120
Query: 733 XXXXXNVIFSWSS------TVPVFAALWFLNGLAQGLGWPPCGKILRKWF 864
+F + ++ LW +NGL Q GWP ++ WF
Sbjct: 121 SSALVVFVFGTLTEWLHFYNKGLYCCLWIVNGLLQSTGWPCVVAVMGNWF 170
Database: RefSeq49_SP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 11,343,932
Number of sequences in database: 24,897
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 24897
Number of Hits to DB: 52,928,220
Number of extensions: 1701432
Number of successful extensions: 6340
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 6315
Number of HSP's successfully gapped: 3
Length of query: 612
Length of database: 11,343,932
Length adjustment: 105
Effective length of query: 507
Effective length of database: 8,729,747
Effective search space: 4425981729
Effective search space used: 4425981729
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to RefSeqMP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-013307
(1837 letters)
Database: RefSeq49_MP.fasta
30,036 sequences; 15,617,559 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_032089.2| glucose-6-phosphate translocase [Mus musculus]. 712 0.0
Alignment gi|NP_082399.3| sugar phosphate exchanger 3 [Mus musculus]. 61 3e-09
Alignment gi|NP_001139432.1| sugar phosphate exchanger 2 isoform 1 [Mus m... 52 2e-06
Alignment gi|NP_064654.3| sugar phosphate exchanger 2 isoform 2 [Mus musc... 52 2e-06
>ref|NP_032089.2| glucose-6-phosphate translocase [Mus musculus].
Length = 429
Score = 712 bits (1837), Expect = 0.0
Identities = 355/429 (82%), Positives = 369/429 (86%)
Frame = +1
Query: 478 MAARGYGYYRAVIFSAMFGGYSLYYFNRKTFSFVMPSLVEEIRLDKDDLGLITSSQSAAY 657
MAA+GYGYYR VIF+AMFGGYSLYYFNRKTFSFVMPSLV+EI LDKDDLGLITSSQSAAY
Sbjct: 1 MAAQGYGYYRTVIFAAMFGGYSLYYFNRKTFSFVMPSLVDEIALDKDDLGLITSSQSAAY 60
Query: 658 AISKFVSGVLSDQMSARWLFXXXXXXXXXXNVIFSWSSTVPVFAALWFLNGLAQGLGWPP 837
AISKFVSGVLSDQMSARWLF NV+FSWSSTV FAALWFLNGLAQGLGWPP
Sbjct: 61 AISKFVSGVLSDQMSARWLFSSGLLLVGLVNVVFSWSSTVSAFAALWFLNGLAQGLGWPP 120
Query: 838 CGKILRKWFEPSQFGTWWAILSTSMNLAGGLGPILATILAQSYSWRSTLALSGAXXXXXX 1017
CGKILRKWFEPSQFGTWWA+LSTSMNLAG LGPILATILAQSYSWRSTLALSGA
Sbjct: 121 CGKILRKWFEPSQFGTWWAVLSTSMNLAGSLGPILATILAQSYSWRSTLALSGALCVVVS 180
Query: 1018 XXXXXXIHNEPADVGLRNLDPIPXXXXXXXXXXXXTLQELLLTPYLWVLSIGYLVVFGVK 1197
IHNEPADVGLRNLDP P TLQ+LLL+PYLWVLS GYLVVFGVK
Sbjct: 181 FFCLLLIHNEPADVGLRNLDPAPSKGKKGSSKEESTLQDLLLSPYLWVLSTGYLVVFGVK 240
Query: 1198 TCCTDWGQFFLIQEKGQSALVGSSYMSALEVGGLVGSIAAGYLSDRAMAKAGLSIHGNPR 1377
TCCTDWGQFFLIQE+GQSALVGSSY+SALEVGGLVGSIAAGYLSDRAMAKAGLS++GNPR
Sbjct: 241 TCCTDWGQFFLIQERGQSALVGSSYISALEVGGLVGSIAAGYLSDRAMAKAGLSLYGNPR 300
Query: 1378 HXXXXXXXXXXXXXXYLFRVTVTSDSPKLWILVLGAVFGFSSYGPIALFGVIANESAPPN 1557
H +LFRVTVTSDSPK+WILVLGAVFGFSSYGPIALFGVIANESAPPN
Sbjct: 301 HGLLLLMMAGMAASMFLFRVTVTSDSPKIWILVLGAVFGFSSYGPIALFGVIANESAPPN 360
Query: 1558 LCGTSHAIVGLMANVGGFLAGLPFSTIAKHYSWSTAFWVAEVICAASTGAFFLLRNIRTK 1737
LCGTSHAIVGLMANVGGFLAGLPFSTIAKHYSWSTAFWVAEV+C AST FFLLRNIRTK
Sbjct: 361 LCGTSHAIVGLMANVGGFLAGLPFSTIAKHYSWSTAFWVAEVVCGASTVVFFLLRNIRTK 420
Query: 1738 MGRVPKKAE 1764
MGRV KK E
Sbjct: 421 MGRVSKKGE 429
>ref|NP_082399.3| sugar phosphate exchanger 3 [Mus musculus].
Length = 494
Score = 60.8 bits (146), Expect = 3e-09
Identities = 67/343 (19%), Positives = 120/343 (34%), Gaps = 57/343 (16%)
Frame = +1
Query: 493 YGYYRAVIFSAMFGGYSLYYFNRKTFSFVMPSLVEE-------IRLDKDD---------- 621
+ ++ +F F YSL + +RKTFS V S+ ++ LD
Sbjct: 16 FSHHHLAVFLLTFFSYSLLHASRKTFSNVKVSISKQWTPNAFNTSLDLPAEIWSSNHLFP 75
Query: 622 --------LGLITSSQSAAYAISKFVSGVLSDQMSARWLFXXXXXXXXXXNVIFS----W 765
LG + + +YA+ F+SG++ D+++ RW+ +F W
Sbjct: 76 STEEATLFLGTLDTVFLFSYAVGLFISGIIGDRLNLRWVLSFGMCSSAFVVFVFGTLTEW 135
Query: 766 SSTVP--VFAALWFLNGLAQGLGWPPCGKILRKWFEPSQFGTWWAILSTSMNLAGGLGPI 939
+ LW +NGL Q GWP ++ WF + G + + S ++ LG
Sbjct: 136 LHFYNKWFYCGLWIVNGLLQSTGWPCVVAVMGNWFGKAGRGVVFGLWSACASVGNILGAF 195
Query: 940 LATILAQSYSWRSTLALSGAXXXXXXXXXXXXIHNEPADVGLRNLDP------------I 1083
LA+ + Q Y + ++ + + P ++GL ++ I
Sbjct: 196 LASSVLQ-YGYEYAFLVTASVQFAGGIIIFFGLLVSPEEIGLPSIGAEESSEEDSQRPLI 254
Query: 1084 PXXXXXXXXXXXXTLQE--------------LLLTPYLWVLSIGYLVVFGVKTCCTDWGQ 1221
++QE P + S+ Y + V W
Sbjct: 255 DGAENEDDYEPNYSIQEDRAVVQVKAISFHQACCLPGVIPYSLAYACLKLVNYSFFFWLP 314
Query: 1222 FFLIQEKGQSALVGSSYMSALEVGGLVGSIAAGYLSDRAMAKA 1350
F+L G +VGG++G G++SD +A
Sbjct: 315 FYLSNNFGWKEAEADKLSIWYDVGGIIGGTLLGFISDVLQKRA 357
>ref|NP_001139432.1| sugar phosphate exchanger 2 isoform 1 [Mus musculus].
Length = 506
Score = 52.0 bits (123), Expect = 2e-06
Identities = 72/354 (20%), Positives = 117/354 (33%), Gaps = 70/354 (19%)
Frame = +1
Query: 499 YYRAVIFSAMFGGYSLYYFNRKTFSFVMPSL----VEEIR------------------LD 612
++R I F Y+ Y+ +RK S V L E +R D
Sbjct: 20 WFRGFILLLTFLIYACYHMSRKPISIVKSRLHQNCSEMVRPVNDTHDLNDTTWCSWSPFD 79
Query: 613 KDD----LGLITSSQSAAYAISKFVSGVLSDQMSARW----------LFXXXXXXXXXXN 750
KDD LG + ++ AYAI F+SG+ +++ R+ LF N
Sbjct: 80 KDDYKELLGAVDNAFLVAYAIGMFISGIFGERLPLRYYLSAGMVLSGLFTSLFGLGYFWN 139
Query: 751 VIFSWSSTVPVFAALWFLNGLAQGLGWPPCGKILRKWFEPSQFGTWWAILSTSMNLAGGL 930
+ W F + NGL Q GWP + WF + G I ++ ++ L
Sbjct: 140 IHMLW-----YFVLIQICNGLVQTTGWPSVVTCVGNWFGKGKRGFIMGIWNSHTSVGNIL 194
Query: 931 GPILATILAQSYSWRSTLALSGAXXXXXXXXXXXXIHNEPADVGLRNLDPIPXXXXXXXX 1110
G ++A + + W + + G + P DV D P
Sbjct: 195 GSLIAGVWVNQH-WGLSFIVPGIITAIMGVITFLFLIEYPEDV-----DCTPPRHHDDPE 248
Query: 1111 XXXXTLQELLLTPY--------------------------LWVLSIGYLVVFG------- 1191
++ + +PY L L I ++ F
Sbjct: 249 KEQDNPEDPVNSPYSSRESNVDIAASSSKEQGPEPEAISFLGALRIPGVIEFSLCLLFAK 308
Query: 1192 -VKTCCTDWGQFFLIQEKGQSALVGSSYMSALEVGGLVGSIAAGYLSDRAMAKA 1350
V W ++ SA + +VGG++G I AG +SD ++A
Sbjct: 309 LVSYTFLYWLPLYIFNVAHFSAKEAGDLSTLFDVGGIIGGIMAGLISDYTNSRA 362
>ref|NP_064654.3| sugar phosphate exchanger 2 isoform 2 [Mus musculus].
Length = 501
Score = 52.0 bits (123), Expect = 2e-06
Identities = 72/354 (20%), Positives = 117/354 (33%), Gaps = 70/354 (19%)
Frame = +1
Query: 499 YYRAVIFSAMFGGYSLYYFNRKTFSFVMPSL----VEEIR------------------LD 612
++R I F Y+ Y+ +RK S V L E +R D
Sbjct: 20 WFRGFILLLTFLIYACYHMSRKPISIVKSRLHQNCSEMVRPVNDTHDLNDTTWCSWSPFD 79
Query: 613 KDD----LGLITSSQSAAYAISKFVSGVLSDQMSARW----------LFXXXXXXXXXXN 750
KDD LG + ++ AYAI F+SG+ +++ R+ LF N
Sbjct: 80 KDDYKELLGAVDNAFLVAYAIGMFISGIFGERLPLRYYLSAGMVLSGLFTSLFGLGYFWN 139
Query: 751 VIFSWSSTVPVFAALWFLNGLAQGLGWPPCGKILRKWFEPSQFGTWWAILSTSMNLAGGL 930
+ W F + NGL Q GWP + WF + G I ++ ++ L
Sbjct: 140 IHMLW-----YFVLIQICNGLVQTTGWPSVVTCVGNWFGKGKRGFIMGIWNSHTSVGNIL 194
Query: 931 GPILATILAQSYSWRSTLALSGAXXXXXXXXXXXXIHNEPADVGLRNLDPIPXXXXXXXX 1110
G ++A + + W + + G + P DV D P
Sbjct: 195 GSLIAGVWVNQH-WGLSFIVPGIITAIMGVITFLFLIEYPEDV-----DCTPPRHHDDPE 248
Query: 1111 XXXXTLQELLLTPY--------------------------LWVLSIGYLVVFG------- 1191
++ + +PY L L I ++ F
Sbjct: 249 KEQDNPEDPVNSPYSSRESNVDIAASSSKEQGPEPEAISFLGALRIPGVIEFSLCLLFAK 308
Query: 1192 -VKTCCTDWGQFFLIQEKGQSALVGSSYMSALEVGGLVGSIAAGYLSDRAMAKA 1350
V W ++ SA + +VGG++G I AG +SD ++A
Sbjct: 309 LVSYTFLYWLPLYIFNVAHFSAKEAGDLSTLFDVGGIIGGIMAGLISDYTNSRA 362
Database: RefSeq49_MP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 15,617,559
Number of sequences in database: 30,036
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 30036
Number of Hits to DB: 70,238,449
Number of extensions: 2171145
Number of successful extensions: 7414
Number of sequences better than 1.0e-05: 4
Number of HSP's gapped: 7379
Number of HSP's successfully gapped: 5
Length of query: 612
Length of database: 15,617,559
Length adjustment: 107
Effective length of query: 505
Effective length of database: 12,403,707
Effective search space: 6263872035
Effective search space used: 6263872035
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to RefSeqHP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-013307
(1837 letters)
Database: RefSeq49_HP.fasta
32,964 sequences; 18,297,164 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001458.1| glucose-6-phosphate translocase isoform 1 [Homo... 728 0.0
Alignment gi|NP_001157752.1| glucose-6-phosphate translocase isoform 1 [H... 728 0.0
Alignment gi|NP_001157749.1| glucose-6-phosphate translocase isoform 1 [H... 728 0.0
Alignment gi|NP_001157750.1| glucose-6-phosphate translocase isoform 2 [H... 715 0.0
Alignment gi|NP_001157751.1| glucose-6-phosphate translocase isoform 3 [H... 594 e-169
Alignment gi|NP_996996.1| sugar phosphate exchanger 3 isoform 1 [Homo sap... 64 4e-10
Alignment gi|NP_115671.1| sugar phosphate exchanger 3 isoform 2 [Homo sap... 64 4e-10
>ref|NP_001458.1| glucose-6-phosphate translocase isoform 1 [Homo sapiens].
Length = 429
Score = 728 bits (1878), Expect = 0.0
Identities = 366/429 (85%), Positives = 373/429 (86%)
Frame = +1
Query: 478 MAARGYGYYRAVIFSAMFGGYSLYYFNRKTFSFVMPSLVEEIRLDKDDLGLITSSQSAAY 657
MAA+GYGYYR VIFSAMFGGYSLYYFNRKTFSFVMPSLVEEI LDKDDLG ITSSQSAAY
Sbjct: 1 MAAQGYGYYRTVIFSAMFGGYSLYYFNRKTFSFVMPSLVEEIPLDKDDLGFITSSQSAAY 60
Query: 658 AISKFVSGVLSDQMSARWLFXXXXXXXXXXNVIFSWSSTVPVFAALWFLNGLAQGLGWPP 837
AISKFVSGVLSDQMSARWLF N+ F+WSSTVPVFAALWFLNGLAQGLGWPP
Sbjct: 61 AISKFVSGVLSDQMSARWLFSSGLLLVGLVNIFFAWSSTVPVFAALWFLNGLAQGLGWPP 120
Query: 838 CGKILRKWFEPSQFGTWWAILSTSMNLAGGLGPILATILAQSYSWRSTLALSGAXXXXXX 1017
CGK+LRKWFEPSQFGTWWAILSTSMNLAGGLGPILATILAQSYSWRSTLALSGA
Sbjct: 121 CGKVLRKWFEPSQFGTWWAILSTSMNLAGGLGPILATILAQSYSWRSTLALSGALCVVVS 180
Query: 1018 XXXXXXIHNEPADVGLRNLDPIPXXXXXXXXXXXXTLQELLLTPYLWVLSIGYLVVFGVK 1197
IHNEPADVGLRNLDP+P TLQELLL+PYLWVLS GYLVVFGVK
Sbjct: 181 FLCLLLIHNEPADVGLRNLDPMPSEGKKGSLKEESTLQELLLSPYLWVLSTGYLVVFGVK 240
Query: 1198 TCCTDWGQFFLIQEKGQSALVGSSYMSALEVGGLVGSIAAGYLSDRAMAKAGLSIHGNPR 1377
TCCTDWGQFFLIQEKGQSALVGSSYMSALEVGGLVGSIAAGYLSDRAMAKAGLS +GNPR
Sbjct: 241 TCCTDWGQFFLIQEKGQSALVGSSYMSALEVGGLVGSIAAGYLSDRAMAKAGLSNYGNPR 300
Query: 1378 HXXXXXXXXXXXXXXYLFRVTVTSDSPKLWILVLGAVFGFSSYGPIALFGVIANESAPPN 1557
H YLFRVTVTSDSPKLWILVLGAVFGFSSYGPIALFGVIANESAPPN
Sbjct: 301 HGLLLFMMAGMTVSMYLFRVTVTSDSPKLWILVLGAVFGFSSYGPIALFGVIANESAPPN 360
Query: 1558 LCGTSHAIVGLMANVGGFLAGLPFSTIAKHYSWSTAFWVAEVICAASTGAFFLLRNIRTK 1737
LCGTSHAIVGLMANVGGFLAGLPFSTIAKHYSWSTAFWVAEVICAAST AFFLLRNIRTK
Sbjct: 361 LCGTSHAIVGLMANVGGFLAGLPFSTIAKHYSWSTAFWVAEVICAASTAAFFLLRNIRTK 420
Query: 1738 MGRVPKKAE 1764
MGRV KKAE
Sbjct: 421 MGRVSKKAE 429
>ref|NP_001157752.1| glucose-6-phosphate translocase isoform 1 [Homo sapiens].
Length = 429
Score = 728 bits (1878), Expect = 0.0
Identities = 366/429 (85%), Positives = 373/429 (86%)
Frame = +1
Query: 478 MAARGYGYYRAVIFSAMFGGYSLYYFNRKTFSFVMPSLVEEIRLDKDDLGLITSSQSAAY 657
MAA+GYGYYR VIFSAMFGGYSLYYFNRKTFSFVMPSLVEEI LDKDDLG ITSSQSAAY
Sbjct: 1 MAAQGYGYYRTVIFSAMFGGYSLYYFNRKTFSFVMPSLVEEIPLDKDDLGFITSSQSAAY 60
Query: 658 AISKFVSGVLSDQMSARWLFXXXXXXXXXXNVIFSWSSTVPVFAALWFLNGLAQGLGWPP 837
AISKFVSGVLSDQMSARWLF N+ F+WSSTVPVFAALWFLNGLAQGLGWPP
Sbjct: 61 AISKFVSGVLSDQMSARWLFSSGLLLVGLVNIFFAWSSTVPVFAALWFLNGLAQGLGWPP 120
Query: 838 CGKILRKWFEPSQFGTWWAILSTSMNLAGGLGPILATILAQSYSWRSTLALSGAXXXXXX 1017
CGK+LRKWFEPSQFGTWWAILSTSMNLAGGLGPILATILAQSYSWRSTLALSGA
Sbjct: 121 CGKVLRKWFEPSQFGTWWAILSTSMNLAGGLGPILATILAQSYSWRSTLALSGALCVVVS 180
Query: 1018 XXXXXXIHNEPADVGLRNLDPIPXXXXXXXXXXXXTLQELLLTPYLWVLSIGYLVVFGVK 1197
IHNEPADVGLRNLDP+P TLQELLL+PYLWVLS GYLVVFGVK
Sbjct: 181 FLCLLLIHNEPADVGLRNLDPMPSEGKKGSLKEESTLQELLLSPYLWVLSTGYLVVFGVK 240
Query: 1198 TCCTDWGQFFLIQEKGQSALVGSSYMSALEVGGLVGSIAAGYLSDRAMAKAGLSIHGNPR 1377
TCCTDWGQFFLIQEKGQSALVGSSYMSALEVGGLVGSIAAGYLSDRAMAKAGLS +GNPR
Sbjct: 241 TCCTDWGQFFLIQEKGQSALVGSSYMSALEVGGLVGSIAAGYLSDRAMAKAGLSNYGNPR 300
Query: 1378 HXXXXXXXXXXXXXXYLFRVTVTSDSPKLWILVLGAVFGFSSYGPIALFGVIANESAPPN 1557
H YLFRVTVTSDSPKLWILVLGAVFGFSSYGPIALFGVIANESAPPN
Sbjct: 301 HGLLLFMMAGMTVSMYLFRVTVTSDSPKLWILVLGAVFGFSSYGPIALFGVIANESAPPN 360
Query: 1558 LCGTSHAIVGLMANVGGFLAGLPFSTIAKHYSWSTAFWVAEVICAASTGAFFLLRNIRTK 1737
LCGTSHAIVGLMANVGGFLAGLPFSTIAKHYSWSTAFWVAEVICAAST AFFLLRNIRTK
Sbjct: 361 LCGTSHAIVGLMANVGGFLAGLPFSTIAKHYSWSTAFWVAEVICAASTAAFFLLRNIRTK 420
Query: 1738 MGRVPKKAE 1764
MGRV KKAE
Sbjct: 421 MGRVSKKAE 429
>ref|NP_001157749.1| glucose-6-phosphate translocase isoform 1 [Homo sapiens].
Length = 429
Score = 728 bits (1878), Expect = 0.0
Identities = 366/429 (85%), Positives = 373/429 (86%)
Frame = +1
Query: 478 MAARGYGYYRAVIFSAMFGGYSLYYFNRKTFSFVMPSLVEEIRLDKDDLGLITSSQSAAY 657
MAA+GYGYYR VIFSAMFGGYSLYYFNRKTFSFVMPSLVEEI LDKDDLG ITSSQSAAY
Sbjct: 1 MAAQGYGYYRTVIFSAMFGGYSLYYFNRKTFSFVMPSLVEEIPLDKDDLGFITSSQSAAY 60
Query: 658 AISKFVSGVLSDQMSARWLFXXXXXXXXXXNVIFSWSSTVPVFAALWFLNGLAQGLGWPP 837
AISKFVSGVLSDQMSARWLF N+ F+WSSTVPVFAALWFLNGLAQGLGWPP
Sbjct: 61 AISKFVSGVLSDQMSARWLFSSGLLLVGLVNIFFAWSSTVPVFAALWFLNGLAQGLGWPP 120
Query: 838 CGKILRKWFEPSQFGTWWAILSTSMNLAGGLGPILATILAQSYSWRSTLALSGAXXXXXX 1017
CGK+LRKWFEPSQFGTWWAILSTSMNLAGGLGPILATILAQSYSWRSTLALSGA
Sbjct: 121 CGKVLRKWFEPSQFGTWWAILSTSMNLAGGLGPILATILAQSYSWRSTLALSGALCVVVS 180
Query: 1018 XXXXXXIHNEPADVGLRNLDPIPXXXXXXXXXXXXTLQELLLTPYLWVLSIGYLVVFGVK 1197
IHNEPADVGLRNLDP+P TLQELLL+PYLWVLS GYLVVFGVK
Sbjct: 181 FLCLLLIHNEPADVGLRNLDPMPSEGKKGSLKEESTLQELLLSPYLWVLSTGYLVVFGVK 240
Query: 1198 TCCTDWGQFFLIQEKGQSALVGSSYMSALEVGGLVGSIAAGYLSDRAMAKAGLSIHGNPR 1377
TCCTDWGQFFLIQEKGQSALVGSSYMSALEVGGLVGSIAAGYLSDRAMAKAGLS +GNPR
Sbjct: 241 TCCTDWGQFFLIQEKGQSALVGSSYMSALEVGGLVGSIAAGYLSDRAMAKAGLSNYGNPR 300
Query: 1378 HXXXXXXXXXXXXXXYLFRVTVTSDSPKLWILVLGAVFGFSSYGPIALFGVIANESAPPN 1557
H YLFRVTVTSDSPKLWILVLGAVFGFSSYGPIALFGVIANESAPPN
Sbjct: 301 HGLLLFMMAGMTVSMYLFRVTVTSDSPKLWILVLGAVFGFSSYGPIALFGVIANESAPPN 360
Query: 1558 LCGTSHAIVGLMANVGGFLAGLPFSTIAKHYSWSTAFWVAEVICAASTGAFFLLRNIRTK 1737
LCGTSHAIVGLMANVGGFLAGLPFSTIAKHYSWSTAFWVAEVICAAST AFFLLRNIRTK
Sbjct: 361 LCGTSHAIVGLMANVGGFLAGLPFSTIAKHYSWSTAFWVAEVICAASTAAFFLLRNIRTK 420
Query: 1738 MGRVPKKAE 1764
MGRV KKAE
Sbjct: 421 MGRVSKKAE 429
>ref|NP_001157750.1| glucose-6-phosphate translocase isoform 2 [Homo sapiens].
Length = 451
Score = 715 bits (1845), Expect = 0.0
Identities = 366/451 (81%), Positives = 373/451 (82%), Gaps = 22/451 (4%)
Frame = +1
Query: 478 MAARGYGYYRAVIFSAMFGGYSLYYFNRKTFSFVMPSLVEEIRLDKDDLGLITSSQSAAY 657
MAA+GYGYYR VIFSAMFGGYSLYYFNRKTFSFVMPSLVEEI LDKDDLG ITSSQSAAY
Sbjct: 1 MAAQGYGYYRTVIFSAMFGGYSLYYFNRKTFSFVMPSLVEEIPLDKDDLGFITSSQSAAY 60
Query: 658 AISKFVSGVLSDQMSARWLFXXXXXXXXXXNVIFSWSSTVPVFAALWFLNGLAQGLGWPP 837
AISKFVSGVLSDQMSARWLF N+ F+WSSTVPVFAALWFLNGLAQGLGWPP
Sbjct: 61 AISKFVSGVLSDQMSARWLFSSGLLLVGLVNIFFAWSSTVPVFAALWFLNGLAQGLGWPP 120
Query: 838 CGKILRKWFEPSQFGTWWAILSTSMNLAGGLGPILATILAQSYSWRSTLALSGAXXXXXX 1017
CGK+LRKWFEPSQFGTWWAILSTSMNLAGGLGPILATILAQSYSWRSTLALSGA
Sbjct: 121 CGKVLRKWFEPSQFGTWWAILSTSMNLAGGLGPILATILAQSYSWRSTLALSGALCVVVS 180
Query: 1018 XXXXXXIHNEPADVGLRNLDPIPXXXXXXXXXXXXTLQELLLTPYLWVLSIGYLVVFGVK 1197
IHNEPADVGLRNLDP+P TLQELLL+PYLWVLS GYLVVFGVK
Sbjct: 181 FLCLLLIHNEPADVGLRNLDPMPSEGKKGSLKEESTLQELLLSPYLWVLSTGYLVVFGVK 240
Query: 1198 TCCTDWGQFFLIQEKGQSALVGSSYMSALEVGGLVGSIAAGYLSDRAMAKAGLSIHGNPR 1377
TCCTDWGQFFLIQEKGQSALVGSSYMSALEVGGLVGSIAAGYLSDRAMAKAGLS +GNPR
Sbjct: 241 TCCTDWGQFFLIQEKGQSALVGSSYMSALEVGGLVGSIAAGYLSDRAMAKAGLSNYGNPR 300
Query: 1378 HXXXXXXXXXXXXXXYLFRVTVTSDSPK----------------------LWILVLGAVF 1491
H YLFRVTVTSDSPK LWILVLGAVF
Sbjct: 301 HGLLLFMMAGMTVSMYLFRVTVTSDSPKDVAFWTLALHPLAELTGFTEHELWILVLGAVF 360
Query: 1492 GFSSYGPIALFGVIANESAPPNLCGTSHAIVGLMANVGGFLAGLPFSTIAKHYSWSTAFW 1671
GFSSYGPIALFGVIANESAPPNLCGTSHAIVGLMANVGGFLAGLPFSTIAKHYSWSTAFW
Sbjct: 361 GFSSYGPIALFGVIANESAPPNLCGTSHAIVGLMANVGGFLAGLPFSTIAKHYSWSTAFW 420
Query: 1672 VAEVICAASTGAFFLLRNIRTKMGRVPKKAE 1764
VAEVICAAST AFFLLRNIRTKMGRV KKAE
Sbjct: 421 VAEVICAASTAAFFLLRNIRTKMGRVSKKAE 451
>ref|NP_001157751.1| glucose-6-phosphate translocase isoform 3 [Homo sapiens].
Length = 356
Score = 594 bits (1531), Expect = e-169
Identities = 297/356 (83%), Positives = 303/356 (85%)
Frame = +1
Query: 697 MSARWLFXXXXXXXXXXNVIFSWSSTVPVFAALWFLNGLAQGLGWPPCGKILRKWFEPSQ 876
MSARWLF N+ F+WSSTVPVFAALWFLNGLAQGLGWPPCGK+LRKWFEPSQ
Sbjct: 1 MSARWLFSSGLLLVGLVNIFFAWSSTVPVFAALWFLNGLAQGLGWPPCGKVLRKWFEPSQ 60
Query: 877 FGTWWAILSTSMNLAGGLGPILATILAQSYSWRSTLALSGAXXXXXXXXXXXXIHNEPAD 1056
FGTWWAILSTSMNLAGGLGPILATILAQSYSWRSTLALSGA IHNEPAD
Sbjct: 61 FGTWWAILSTSMNLAGGLGPILATILAQSYSWRSTLALSGALCVVVSFLCLLLIHNEPAD 120
Query: 1057 VGLRNLDPIPXXXXXXXXXXXXTLQELLLTPYLWVLSIGYLVVFGVKTCCTDWGQFFLIQ 1236
VGLRNLDP+P TLQELLL+PYLWVLS GYLVVFGVKTCCTDWGQFFLIQ
Sbjct: 121 VGLRNLDPMPSEGKKGSLKEESTLQELLLSPYLWVLSTGYLVVFGVKTCCTDWGQFFLIQ 180
Query: 1237 EKGQSALVGSSYMSALEVGGLVGSIAAGYLSDRAMAKAGLSIHGNPRHXXXXXXXXXXXX 1416
EKGQSALVGSSYMSALEVGGLVGSIAAGYLSDRAMAKAGLS +GNPRH
Sbjct: 181 EKGQSALVGSSYMSALEVGGLVGSIAAGYLSDRAMAKAGLSNYGNPRHGLLLFMMAGMTV 240
Query: 1417 XXYLFRVTVTSDSPKLWILVLGAVFGFSSYGPIALFGVIANESAPPNLCGTSHAIVGLMA 1596
YLFRVTVTSDSPKLWILVLGAVFGFSSYGPIALFGVIANESAPPNLCGTSHAIVGLMA
Sbjct: 241 SMYLFRVTVTSDSPKLWILVLGAVFGFSSYGPIALFGVIANESAPPNLCGTSHAIVGLMA 300
Query: 1597 NVGGFLAGLPFSTIAKHYSWSTAFWVAEVICAASTGAFFLLRNIRTKMGRVPKKAE 1764
NVGGFLAGLPFSTIAKHYSWSTAFWVAEVICAAST AFFLLRNIRTKMGRV KKAE
Sbjct: 301 NVGGFLAGLPFSTIAKHYSWSTAFWVAEVICAASTAAFFLLRNIRTKMGRVSKKAE 356
>ref|NP_996996.1| sugar phosphate exchanger 3 isoform 1 [Homo sapiens].
Length = 494
Score = 64.3 bits (155), Expect = 4e-10
Identities = 49/226 (21%), Positives = 92/226 (40%), Gaps = 31/226 (13%)
Frame = +1
Query: 493 YGYYRAVIFSAMFGGYSLYYFNRKTFSFVMPSLVEE---------IRLDKDD-------- 621
+ ++ V+F F YSL + +RKTFS V S+ E+ + L +
Sbjct: 16 FSHHHVVVFLLTFFSYSLLHASRKTFSNVKVSISEQWTPSAFNTSVELPVEIWSSNHLFP 75
Query: 622 --------LGLITSSQSAAYAISKFVSGVLSDQMSARWLFXXXXXXXXXXNVIFS----W 765
LG + + +YA+ F+SG++ D+++ RW+ +F W
Sbjct: 76 SAEKATLFLGTLDTIFLFSYAVGLFISGIVGDRLNLRWVLSFGMCSSALVVFVFGALTEW 135
Query: 766 SSTVP--VFAALWFLNGLAQGLGWPPCGKILRKWFEPSQFGTWWAILSTSMNLAGGLGPI 939
++ LW +NGL Q GWP ++ WF + G + + S ++ LG
Sbjct: 136 LRFYNKWLYCCLWIVNGLLQSTGWPCVVAVMGNWFGKAGRGVVFGLWSACASVGNILGAC 195
Query: 940 LATILAQSYSWRSTLALSGAXXXXXXXXXXXXIHNEPADVGLRNLD 1077
LA+ + Q Y + ++ + + P ++GL ++
Sbjct: 196 LASSVLQ-YGYEYAFLVTASVQFAGGIVIFFGLLVSPEEIGLSGIE 240
>ref|NP_115671.1| sugar phosphate exchanger 3 isoform 2 [Homo sapiens].
Length = 443
Score = 64.3 bits (155), Expect = 4e-10
Identities = 49/226 (21%), Positives = 92/226 (40%), Gaps = 31/226 (13%)
Frame = +1
Query: 493 YGYYRAVIFSAMFGGYSLYYFNRKTFSFVMPSLVEE---------IRLDKDD-------- 621
+ ++ V+F F YSL + +RKTFS V S+ E+ + L +
Sbjct: 16 FSHHHVVVFLLTFFSYSLLHASRKTFSNVKVSISEQWTPSAFNTSVELPVEIWSSNHLFP 75
Query: 622 --------LGLITSSQSAAYAISKFVSGVLSDQMSARWLFXXXXXXXXXXNVIFS----W 765
LG + + +YA+ F+SG++ D+++ RW+ +F W
Sbjct: 76 SAEKATLFLGTLDTIFLFSYAVGLFISGIVGDRLNLRWVLSFGMCSSALVVFVFGALTEW 135
Query: 766 SSTVP--VFAALWFLNGLAQGLGWPPCGKILRKWFEPSQFGTWWAILSTSMNLAGGLGPI 939
++ LW +NGL Q GWP ++ WF + G + + S ++ LG
Sbjct: 136 LRFYNKWLYCCLWIVNGLLQSTGWPCVVAVMGNWFGKAGRGVVFGLWSACASVGNILGAC 195
Query: 940 LATILAQSYSWRSTLALSGAXXXXXXXXXXXXIHNEPADVGLRNLD 1077
LA+ + Q Y + ++ + + P ++GL ++
Sbjct: 196 LASSVLQ-YGYEYAFLVTASVQFAGGIVIFFGLLVSPEEIGLSGIE 240
Database: RefSeq49_HP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,297,164
Number of sequences in database: 32,964
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 32964
Number of Hits to DB: 83,592,156
Number of extensions: 2637429
Number of successful extensions: 9300
Number of sequences better than 1.0e-05: 7
Number of HSP's gapped: 9263
Number of HSP's successfully gapped: 9
Length of query: 612
Length of database: 18,297,164
Length adjustment: 108
Effective length of query: 504
Effective length of database: 14,737,052
Effective search space: 7427474208
Effective search space used: 7427474208
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to Sscrofa10_2
BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-013307
(1837 letters)
Database: Sscrofa_10.2.fasta
4582 sequences; 2,808,509,378 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Sscrofa_Chr09 678 0.0
>Sscrofa_Chr09
|| Length = 153670197
Score = 678 bits (342), Expect = 0.0
Identities = 342/342 (100%)
Strand = Plus / Minus
Query: 285 ggacactgggttccttaggagccgccccaggcttaatgattgtccagaagttggctataa 344
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 51287877 ggacactgggttccttaggagccgccccaggcttaatgattgtccagaagttggctataa 51287818
Query: 345 agggagcctgggaggctgattggaggagggagcagaaaaagcctaactcagcaggtctgg 404
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 51287817 agggagcctgggaggctgattggaggagggagcagaaaaagcctaactcagcaggtctgg 51287758
Query: 405 gcaccgagagccgaaagcaggagctgtggtcagaagctcgtgtcccagccggtagggcct 464
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 51287757 gcaccgagagccgaaagcaggagctgtggtcagaagctcgtgtcccagccggtagggcct 51287698
Query: 465 gctctctcccaccatggcggcccgaggctacggctattatcgtgctgtgatcttctcagc 524
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 51287697 gctctctcccaccatggcggcccgaggctacggctattatcgtgctgtgatcttctcagc 51287638
Query: 525 catgtttggaggctacagcctgtactacttcaaccgcaagaccttctcctttgtcatgcc 584
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 51287637 catgtttggaggctacagcctgtactacttcaaccgcaagaccttctcctttgtcatgcc 51287578
Query: 585 gtcgctggtggaagagatccgtctggacaaggatgacttggg 626
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 51287577 gtcgctggtggaagagatccgtctggacaaggatgacttggg 51287536
Score = 519 bits (262), Expect = e-144
Identities = 262/262 (100%)
Strand = Plus / Minus
Query: 25 caggcggagccactcggcgcctgaagcgaagggcctccggtgcctacgtgcagtcgcctc 84
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 51288712 caggcggagccactcggcgcctgaagcgaagggcctccggtgcctacgtgcagtcgcctc 51288653
Query: 85 ctccgcttgagcctacgccttctgctccagttgctttcccaaccgagcagaaaagccggg 144
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 51288652 ctccgcttgagcctacgccttctgctccagttgctttcccaaccgagcagaaaagccggg 51288593
Query: 145 ggcgtgttgccggggcactgggaagccgggagcttgggcactgcgcctgaagtcgctgct 204
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 51288592 ggcgtgttgccggggcactgggaagccgggagcttgggcactgcgcctgaagtcgctgct 51288533
Query: 205 gcgcctccccgcccacgggcggtcgggtcacggtccctgaagccccagcctgccagattg 264
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 51288532 gcgcctccccgcccacgggcggtcgggtcacggtccctgaagccccagcctgccagattg 51288473
Query: 265 gagcccatactgacgtcaaggg 286
||||||||||||||||||||||
Sbjct: 51288472 gagcccatactgacgtcaaggg 51288451
Score = 490 bits (247), Expect = e-135
Identities = 247/247 (100%)
Strand = Plus / Minus
Query: 857 agtggtttgagccatctcagtttggcacttggtgggccatcctatcaactagcatgaacc 916
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 51286231 agtggtttgagccatctcagtttggcacttggtgggccatcctatcaactagcatgaacc 51286172
Query: 917 tggctggagggctgggccccatcctggcaaccatcctcgcccagagctatagctggcgta 976
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 51286171 tggctggagggctgggccccatcctggcaaccatcctcgcccagagctatagctggcgta 51286112
Query: 977 gcacgctggccctgtctggggccttgtgtgtggttgtctccttcctctgtctcctgctca 1036
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 51286111 gcacgctggccctgtctggggccttgtgtgtggttgtctccttcctctgtctcctgctca 51286052
Query: 1037 tccacaatgaacctgctgatgttggactccgcaacctggaccctatcccctccaagggca 1096
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 51286051 tccacaatgaacctgctgatgttggactccgcaacctggaccctatcccctccaagggca 51285992
Query: 1097 agaaggg 1103
|||||||
Sbjct: 51285991 agaaggg 51285985
Score = 464 bits (234), Expect = e-128
Identities = 234/234 (100%)
Strand = Plus / Minus
Query: 625 gggctcatcaccagtagccagtcagcagcctatgccatcagcaagtttgtgagtggggtg 684
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 51286786 gggctcatcaccagtagccagtcagcagcctatgccatcagcaagtttgtgagtggggtg 51286727
Query: 685 ctgtctgaccagatgagtgctcgctggctcttctcctctgggctgcttcttgttggcctg 744
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 51286726 ctgtctgaccagatgagtgctcgctggctcttctcctctgggctgcttcttgttggcctg 51286667
Query: 745 gtcaatgtcatcttttcctggagctccacagtacctgtcttcgctgctctctggttcctc 804
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 51286666 gtcaatgtcatcttttcctggagctccacagtacctgtcttcgctgctctctggttcctc 51286607
Query: 805 aatggcctggcccaggggctgggctggcccccgtgtggcaagatcttgcggaag 858
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 51286606 aatggcctggcccaggggctgggctggcccccgtgtggcaagatcttgcggaag 51286553
Score = 444 bits (224), Expect = e-122
Identities = 233/236 (98%)
Strand = Plus / Minus
Query: 1600 gtgggtggctttctggctgggttgcccttcagcaccattgccaagcattacagctggagc 1659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 51283292 gtgggtggctttctggctgggttgcccttcagcaccattgccaagcattacagctggagc 51283233
Query: 1660 acagccttctgggtggctgaagtgatctgtgcggccagtacaggtgccttcttcctccta 1719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 51283232 acagccttctgggtggctgaagtgatctgtgcggccagtacaggtgccttcttcctccta 51283173
Query: 1720 cgaaacatccgcaccaagatgggccgagtgccaaagaaggctgagtgaagaccgtgcaaa 1779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 51283172 cgaaacatccgcaccaagatgggccgagtgccaaagaaggctgagtgaagaccgtgcaaa 51283113
Query: 1780 ctctggagcatcctttctcacctgtgtcatgggggttgggaaaggaagggaagggg 1835
||||||||| ||||||||||||||||||||||||||||||||||| ||||| ||||
Sbjct: 51283112 ctctggagcgtcctttctcacctgtgtcatgggggttgggaaagggagggaggggg 51283057
Score = 321 bits (162), Expect = 8e-85
Identities = 162/162 (100%)
Strand = Plus / Minus
Query: 1102 ggctcctcaaaggaggagagtaccttacaggagctgctgctgaccccctacctgtgggtg 1161
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 51285484 ggctcctcaaaggaggagagtaccttacaggagctgctgctgaccccctacctgtgggtg 51285425
Query: 1162 ctctccattggctaccttgtggtatttggcgtaaagacgtgctgtactgactggggccag 1221
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 51285424 ctctccattggctaccttgtggtatttggcgtaaagacgtgctgtactgactggggccag 51285365
Query: 1222 ttcttccttatccaggagaaaggacagtcagccctcgtgggt 1263
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 51285364 ttcttccttatccaggagaaaggacagtcagccctcgtgggt 51285323
Score = 280 bits (141), Expect = 3e-72
Identities = 141/141 (100%)
Strand = Plus / Minus
Query: 1460 agctctggatcctggtgttgggagctgtgtttggtttctcctcttatggtcccattgcct 1519
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 51283544 agctctggatcctggtgttgggagctgtgtttggtttctcctcttatggtcccattgcct 51283485
Query: 1520 tgtttggagtcatagccaatgagagtgcccctcccaacctgtgtggcacctcccatgcca 1579
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 51283484 tgtttggagtcatagccaatgagagtgcccctcccaacctgtgtggcacctcccatgcca 51283425
Query: 1580 ttgtgggactcatggccaatg 1600
|||||||||||||||||||||
Sbjct: 51283424 ttgtgggactcatggccaatg 51283404
Score = 230 bits (116), Expect = 2e-57
Identities = 116/116 (100%)
Strand = Plus / Minus
Query: 1346 aggcagggctgtccatccacgggaacccccgccatggcctgctgctgctcatgatggctg 1405
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 51284517 aggcagggctgtccatccacgggaacccccgccatggcctgctgctgctcatgatggctg 51284458
Query: 1406 gcatgacagcatccatgtacctcttccgggtaactgtgaccagtgactcccctaag 1461
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 51284457 gcatgacagcatccatgtacctcttccgggtaactgtgaccagtgactcccctaag 51284402
Score = 174 bits (88), Expect = 1e-40
Identities = 88/88 (100%)
Strand = Plus / Minus
Query: 1261 ggtagctcctacatgagtgccctggaggttgggggccttgtaggcagcatcgcagctggc 1320
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 51285106 ggtagctcctacatgagtgccctggaggttgggggccttgtaggcagcatcgcagctggc 51285047
Query: 1321 tacttgtcagaccgggccatggcaaagg 1348
||||||||||||||||||||||||||||
Sbjct: 51285046 tacttgtcagaccgggccatggcaaagg 51285019
Database: Sscrofa_10.2.fasta
Posted date: Nov 16, 2011 10:34 AM
Number of letters in database: 2,808,509,378
Number of sequences in database: 4582
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4582
Number of Hits to DB: 49,969,637
Number of extensions: 351
Number of successful extensions: 351
Number of sequences better than 1.0e-05: 1
Number of HSP's gapped: 351
Number of HSP's successfully gapped: 9
Length of query: 1837
Length of database: 2,808,509,378
Length adjustment: 22
Effective length of query: 1815
Effective length of database: 2,808,408,574
Effective search space: 5097261561810
Effective search space used: 5097261561810
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 18 (36.2 bits)
S2: 30 (60.0 bits)