Search to RefSeqCP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-013376
(1422 letters)
Database: RefSeq49_CP.fasta
33,336 sequences; 18,874,504 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_537366.2| PREDICTED: similar to SKB1 homolog isoform 1 [C... 908 0.0
Alignment gi|XP_857447.1| PREDICTED: similar to SKB1 homolog isoform 9 [C... 900 0.0
Alignment gi|XP_857529.1| PREDICTED: similar to SKB1 homolog isoform 11 [... 876 0.0
Alignment gi|XP_857408.1| PREDICTED: similar to SKB1 homolog isoform 8 [C... 797 0.0
Alignment gi|XP_857361.1| PREDICTED: similar to SKB1 homolog isoform 7 [C... 795 0.0
Alignment gi|XP_857323.1| PREDICTED: similar to SKB1 homolog isoform 6 [C... 765 0.0
Alignment gi|XP_857487.1| PREDICTED: similar to SKB1 homolog isoform 10 [... 726 0.0
Alignment gi|XP_857288.1| PREDICTED: similar to SKB1 homolog isoform 5 [C... 412 e-115
Alignment gi|XP_857246.1| PREDICTED: similar to SKB1 homolog isoform 4 [C... 412 e-115
Alignment gi|XP_857199.1| PREDICTED: similar to SKB1 homolog isoform 3 [C... 412 e-115
>ref|XP_537366.2| PREDICTED: similar to SKB1 homolog isoform 1 [Canis familiaris].
Length = 637
Score = 908 bits (2346), Expect = 0.0
Identities = 440/446 (98%), Positives = 446/446 (100%)
Frame = +3
Query: 84 DLNCVPEIADTLGAVAKQGFDFLCMPVFHPRFKREFTQEPAKNRPGPQTRSDLLLSGRDW 263
DLNCVPEIADTLGAVAKQGFDFLCMPVFHPRFKREFTQEPAKNRPGPQTRSDLLLSGRDW
Sbjct: 19 DLNCVPEIADTLGAVAKQGFDFLCMPVFHPRFKREFTQEPAKNRPGPQTRSDLLLSGRDW 78
Query: 264 NTLIVGKLSPWIRPDSKVEKIRRNSEAAMLQELNFGAYLGLPAFLLPLNQEDNTNLARVL 443
NTLIVGKLSPWIRPDSKVEKIRRNSEAAMLQELNFGAYLGLPAFLLPLNQEDNTNLARVL
Sbjct: 79 NTLIVGKLSPWIRPDSKVEKIRRNSEAAMLQELNFGAYLGLPAFLLPLNQEDNTNLARVL 138
Query: 444 TNHIHTGHHSSMFWMRVPLVAPEDLRDDIIENAPASHTEEYSGEEKTWMWWHNFRTLCDY 623
TNHIHTGHHSSMFWMRVPLVAPEDLRDDIIENAP++HTEEYSGEEKTWMWWHNFRTLCDY
Sbjct: 139 TNHIHTGHHSSMFWMRVPLVAPEDLRDDIIENAPSTHTEEYSGEEKTWMWWHNFRTLCDY 198
Query: 624 SKRIAVALEIGADLPSNHVIDRWLGEPIKAAILPTSIFLTNKKGFPVLSKMHQRLIFRLL 803
SKRIAVALEIGADLPSNHVIDRWLGEPIKAAILPTSIFLTNKKGFPVLSKMHQRLIFRLL
Sbjct: 199 SKRIAVALEIGADLPSNHVIDRWLGEPIKAAILPTSIFLTNKKGFPVLSKMHQRLIFRLL 258
Query: 804 KLEVQFIITGTNHHSEKEFCSYLQYLEYLSQNRPPPNAYELFAKGYEDYLQSPLQPLMDN 983
KLEVQFIITGTNHHSEKEFCSYLQYLEYLSQNRPPPNAYELFAKGYEDYLQSPLQPLMDN
Sbjct: 259 KLEVQFIITGTNHHSEKEFCSYLQYLEYLSQNRPPPNAYELFAKGYEDYLQSPLQPLMDN 318
Query: 984 LESQTYEVFEKDPIKYSQYQQAIYKCLLDRVPEEEKDTNVQVLMVLGAGRGPLVNASLRA 1163
LESQTYEVFEKDPIKYSQYQQAIYKCLLDRVP+EEKDTN+QVLMVLGAGRGPLVNASLRA
Sbjct: 319 LESQTYEVFEKDPIKYSQYQQAIYKCLLDRVPDEEKDTNIQVLMVLGAGRGPLVNASLRA 378
Query: 1164 AKQADRRIKLYAVEKNPNAVVTLENWQFEEWGSQVTVVSSDMREWVAPEKADIIVSELLG 1343
AKQADRRIKLYAVEKNPNAVVTLENWQFEEWGSQVTVVSSDMREWVAPEKADIIVSELLG
Sbjct: 379 AKQADRRIKLYAVEKNPNAVVTLENWQFEEWGSQVTVVSSDMREWVAPEKADIIVSELLG 438
Query: 1344 SFADNELSPECLDGAQHFLKNDGLSI 1421
SFADNELSPECLDGAQHFLK+DG+SI
Sbjct: 439 SFADNELSPECLDGAQHFLKDDGVSI 464
>ref|XP_857447.1| PREDICTED: similar to SKB1 homolog isoform 9 [Canis familiaris].
Length = 647
Score = 900 bits (2325), Expect = 0.0
Identities = 440/456 (96%), Positives = 446/456 (97%), Gaps = 10/456 (2%)
Frame = +3
Query: 84 DLNCVPEIADTLGAVAKQGFDFLCMPVFHPRFKREFTQEPAKNRPGPQTRSDLLLSGR-- 257
DLNCVPEIADTLGAVAKQGFDFLCMPVFHPRFKREFTQEPAKNRPGPQTRSDLLLSGR
Sbjct: 19 DLNCVPEIADTLGAVAKQGFDFLCMPVFHPRFKREFTQEPAKNRPGPQTRSDLLLSGRVL 78
Query: 258 --------DWNTLIVGKLSPWIRPDSKVEKIRRNSEAAMLQELNFGAYLGLPAFLLPLNQ 413
DWNTLIVGKLSPWIRPDSKVEKIRRNSEAAMLQELNFGAYLGLPAFLLPLNQ
Sbjct: 79 SFLDGGSADWNTLIVGKLSPWIRPDSKVEKIRRNSEAAMLQELNFGAYLGLPAFLLPLNQ 138
Query: 414 EDNTNLARVLTNHIHTGHHSSMFWMRVPLVAPEDLRDDIIENAPASHTEEYSGEEKTWMW 593
EDNTNLARVLTNHIHTGHHSSMFWMRVPLVAPEDLRDDIIENAP++HTEEYSGEEKTWMW
Sbjct: 139 EDNTNLARVLTNHIHTGHHSSMFWMRVPLVAPEDLRDDIIENAPSTHTEEYSGEEKTWMW 198
Query: 594 WHNFRTLCDYSKRIAVALEIGADLPSNHVIDRWLGEPIKAAILPTSIFLTNKKGFPVLSK 773
WHNFRTLCDYSKRIAVALEIGADLPSNHVIDRWLGEPIKAAILPTSIFLTNKKGFPVLSK
Sbjct: 199 WHNFRTLCDYSKRIAVALEIGADLPSNHVIDRWLGEPIKAAILPTSIFLTNKKGFPVLSK 258
Query: 774 MHQRLIFRLLKLEVQFIITGTNHHSEKEFCSYLQYLEYLSQNRPPPNAYELFAKGYEDYL 953
MHQRLIFRLLKLEVQFIITGTNHHSEKEFCSYLQYLEYLSQNRPPPNAYELFAKGYEDYL
Sbjct: 259 MHQRLIFRLLKLEVQFIITGTNHHSEKEFCSYLQYLEYLSQNRPPPNAYELFAKGYEDYL 318
Query: 954 QSPLQPLMDNLESQTYEVFEKDPIKYSQYQQAIYKCLLDRVPEEEKDTNVQVLMVLGAGR 1133
QSPLQPLMDNLESQTYEVFEKDPIKYSQYQQAIYKCLLDRVP+EEKDTN+QVLMVLGAGR
Sbjct: 319 QSPLQPLMDNLESQTYEVFEKDPIKYSQYQQAIYKCLLDRVPDEEKDTNIQVLMVLGAGR 378
Query: 1134 GPLVNASLRAAKQADRRIKLYAVEKNPNAVVTLENWQFEEWGSQVTVVSSDMREWVAPEK 1313
GPLVNASLRAAKQADRRIKLYAVEKNPNAVVTLENWQFEEWGSQVTVVSSDMREWVAPEK
Sbjct: 379 GPLVNASLRAAKQADRRIKLYAVEKNPNAVVTLENWQFEEWGSQVTVVSSDMREWVAPEK 438
Query: 1314 ADIIVSELLGSFADNELSPECLDGAQHFLKNDGLSI 1421
ADIIVSELLGSFADNELSPECLDGAQHFLK+DG+SI
Sbjct: 439 ADIIVSELLGSFADNELSPECLDGAQHFLKDDGVSI 474
>ref|XP_857529.1| PREDICTED: similar to SKB1 homolog isoform 11 [Canis familiaris].
Length = 620
Score = 876 bits (2263), Expect = 0.0
Identities = 425/437 (97%), Positives = 432/437 (98%)
Frame = +3
Query: 111 DTLGAVAKQGFDFLCMPVFHPRFKREFTQEPAKNRPGPQTRSDLLLSGRDWNTLIVGKLS 290
D L +QGFDFLCMPVFHPRFKREFTQEPAKNRPGPQTRSDLLLSGRDWNTLIVGKLS
Sbjct: 11 DRLVIPERQGFDFLCMPVFHPRFKREFTQEPAKNRPGPQTRSDLLLSGRDWNTLIVGKLS 70
Query: 291 PWIRPDSKVEKIRRNSEAAMLQELNFGAYLGLPAFLLPLNQEDNTNLARVLTNHIHTGHH 470
PWIRPDSKVEKIRRNSEAAMLQELNFGAYLGLPAFLLPLNQEDNTNLARVLTNHIHTGHH
Sbjct: 71 PWIRPDSKVEKIRRNSEAAMLQELNFGAYLGLPAFLLPLNQEDNTNLARVLTNHIHTGHH 130
Query: 471 SSMFWMRVPLVAPEDLRDDIIENAPASHTEEYSGEEKTWMWWHNFRTLCDYSKRIAVALE 650
SSMFWMRVPLVAPEDLRDDIIENAP++HTEEYSGEEKTWMWWHNFRTLCDYSKRIAVALE
Sbjct: 131 SSMFWMRVPLVAPEDLRDDIIENAPSTHTEEYSGEEKTWMWWHNFRTLCDYSKRIAVALE 190
Query: 651 IGADLPSNHVIDRWLGEPIKAAILPTSIFLTNKKGFPVLSKMHQRLIFRLLKLEVQFIIT 830
IGADLPSNHVIDRWLGEPIKAAILPTSIFLTNKKGFPVLSKMHQRLIFRLLKLEVQFIIT
Sbjct: 191 IGADLPSNHVIDRWLGEPIKAAILPTSIFLTNKKGFPVLSKMHQRLIFRLLKLEVQFIIT 250
Query: 831 GTNHHSEKEFCSYLQYLEYLSQNRPPPNAYELFAKGYEDYLQSPLQPLMDNLESQTYEVF 1010
GTNHHSEKEFCSYLQYLEYLSQNRPPPNAYELFAKGYEDYLQSPLQPLMDNLESQTYEVF
Sbjct: 251 GTNHHSEKEFCSYLQYLEYLSQNRPPPNAYELFAKGYEDYLQSPLQPLMDNLESQTYEVF 310
Query: 1011 EKDPIKYSQYQQAIYKCLLDRVPEEEKDTNVQVLMVLGAGRGPLVNASLRAAKQADRRIK 1190
EKDPIKYSQYQQAIYKCLLDRVP+EEKDTN+QVLMVLGAGRGPLVNASLRAAKQADRRIK
Sbjct: 311 EKDPIKYSQYQQAIYKCLLDRVPDEEKDTNIQVLMVLGAGRGPLVNASLRAAKQADRRIK 370
Query: 1191 LYAVEKNPNAVVTLENWQFEEWGSQVTVVSSDMREWVAPEKADIIVSELLGSFADNELSP 1370
LYAVEKNPNAVVTLENWQFEEWGSQVTVVSSDMREWVAPEKADIIVSELLGSFADNELSP
Sbjct: 371 LYAVEKNPNAVVTLENWQFEEWGSQVTVVSSDMREWVAPEKADIIVSELLGSFADNELSP 430
Query: 1371 ECLDGAQHFLKNDGLSI 1421
ECLDGAQHFLK+DG+SI
Sbjct: 431 ECLDGAQHFLKDDGVSI 447
>ref|XP_857408.1| PREDICTED: similar to SKB1 homolog isoform 8 [Canis familiaris].
Length = 593
Score = 797 bits (2059), Expect = 0.0
Identities = 396/446 (88%), Positives = 402/446 (90%)
Frame = +3
Query: 84 DLNCVPEIADTLGAVAKQGFDFLCMPVFHPRFKREFTQEPAKNRPGPQTRSDLLLSGRDW 263
DLNCVPEIADTLGAVAKQGFDFLCMPVFHPRFKREFTQEPAKNRPGPQTRSDLLLSGR
Sbjct: 19 DLNCVPEIADTLGAVAKQGFDFLCMPVFHPRFKREFTQEPAKNRPGPQTRSDLLLSGR-- 76
Query: 264 NTLIVGKLSPWIRPDSKVEKIRRNSEAAMLQELNFGAYLGLPAFLLPLNQEDNTNLARVL 443
AFLLPLNQEDNTNLARVL
Sbjct: 77 ------------------------------------------AFLLPLNQEDNTNLARVL 94
Query: 444 TNHIHTGHHSSMFWMRVPLVAPEDLRDDIIENAPASHTEEYSGEEKTWMWWHNFRTLCDY 623
TNHIHTGHHSSMFWMRVPLVAPEDLRDDIIENAP++HTEEYSGEEKTWMWWHNFRTLCDY
Sbjct: 95 TNHIHTGHHSSMFWMRVPLVAPEDLRDDIIENAPSTHTEEYSGEEKTWMWWHNFRTLCDY 154
Query: 624 SKRIAVALEIGADLPSNHVIDRWLGEPIKAAILPTSIFLTNKKGFPVLSKMHQRLIFRLL 803
SKRIAVALEIGADLPSNHVIDRWLGEPIKAAILPTSIFLTNKKGFPVLSKMHQRLIFRLL
Sbjct: 155 SKRIAVALEIGADLPSNHVIDRWLGEPIKAAILPTSIFLTNKKGFPVLSKMHQRLIFRLL 214
Query: 804 KLEVQFIITGTNHHSEKEFCSYLQYLEYLSQNRPPPNAYELFAKGYEDYLQSPLQPLMDN 983
KLEVQFIITGTNHHSEKEFCSYLQYLEYLSQNRPPPNAYELFAKGYEDYLQSPLQPLMDN
Sbjct: 215 KLEVQFIITGTNHHSEKEFCSYLQYLEYLSQNRPPPNAYELFAKGYEDYLQSPLQPLMDN 274
Query: 984 LESQTYEVFEKDPIKYSQYQQAIYKCLLDRVPEEEKDTNVQVLMVLGAGRGPLVNASLRA 1163
LESQTYEVFEKDPIKYSQYQQAIYKCLLDRVP+EEKDTN+QVLMVLGAGRGPLVNASLRA
Sbjct: 275 LESQTYEVFEKDPIKYSQYQQAIYKCLLDRVPDEEKDTNIQVLMVLGAGRGPLVNASLRA 334
Query: 1164 AKQADRRIKLYAVEKNPNAVVTLENWQFEEWGSQVTVVSSDMREWVAPEKADIIVSELLG 1343
AKQADRRIKLYAVEKNPNAVVTLENWQFEEWGSQVTVVSSDMREWVAPEKADIIVSELLG
Sbjct: 335 AKQADRRIKLYAVEKNPNAVVTLENWQFEEWGSQVTVVSSDMREWVAPEKADIIVSELLG 394
Query: 1344 SFADNELSPECLDGAQHFLKNDGLSI 1421
SFADNELSPECLDGAQHFLK+DG+SI
Sbjct: 395 SFADNELSPECLDGAQHFLKDDGVSI 420
>ref|XP_857361.1| PREDICTED: similar to SKB1 homolog isoform 7 [Canis familiaris].
Length = 592
Score = 795 bits (2053), Expect = 0.0
Identities = 395/446 (88%), Positives = 401/446 (89%)
Frame = +3
Query: 84 DLNCVPEIADTLGAVAKQGFDFLCMPVFHPRFKREFTQEPAKNRPGPQTRSDLLLSGRDW 263
DLNCVPEIADTLGAVAKQGFDFLCMPVFHPRFKREFTQEPAKNRPGPQTRSDLLLSGRDW
Sbjct: 19 DLNCVPEIADTLGAVAKQGFDFLCMPVFHPRFKREFTQEPAKNRPGPQTRSDLLLSGRDW 78
Query: 264 NTLIVGKLSPWIRPDSKVEKIRRNSEAAMLQELNFGAYLGLPAFLLPLNQEDNTNLARVL 443
NTLIVGKLSPWIRPDSKVEKIRRNSEA
Sbjct: 79 NTLIVGKLSPWIRPDSKVEKIRRNSEA--------------------------------- 105
Query: 444 TNHIHTGHHSSMFWMRVPLVAPEDLRDDIIENAPASHTEEYSGEEKTWMWWHNFRTLCDY 623
FWMRVPLVAPEDLRDDIIENAP++HTEEYSGEEKTWMWWHNFRTLCDY
Sbjct: 106 ------------FWMRVPLVAPEDLRDDIIENAPSTHTEEYSGEEKTWMWWHNFRTLCDY 153
Query: 624 SKRIAVALEIGADLPSNHVIDRWLGEPIKAAILPTSIFLTNKKGFPVLSKMHQRLIFRLL 803
SKRIAVALEIGADLPSNHVIDRWLGEPIKAAILPTSIFLTNKKGFPVLSKMHQRLIFRLL
Sbjct: 154 SKRIAVALEIGADLPSNHVIDRWLGEPIKAAILPTSIFLTNKKGFPVLSKMHQRLIFRLL 213
Query: 804 KLEVQFIITGTNHHSEKEFCSYLQYLEYLSQNRPPPNAYELFAKGYEDYLQSPLQPLMDN 983
KLEVQFIITGTNHHSEKEFCSYLQYLEYLSQNRPPPNAYELFAKGYEDYLQSPLQPLMDN
Sbjct: 214 KLEVQFIITGTNHHSEKEFCSYLQYLEYLSQNRPPPNAYELFAKGYEDYLQSPLQPLMDN 273
Query: 984 LESQTYEVFEKDPIKYSQYQQAIYKCLLDRVPEEEKDTNVQVLMVLGAGRGPLVNASLRA 1163
LESQTYEVFEKDPIKYSQYQQAIYKCLLDRVP+EEKDTN+QVLMVLGAGRGPLVNASLRA
Sbjct: 274 LESQTYEVFEKDPIKYSQYQQAIYKCLLDRVPDEEKDTNIQVLMVLGAGRGPLVNASLRA 333
Query: 1164 AKQADRRIKLYAVEKNPNAVVTLENWQFEEWGSQVTVVSSDMREWVAPEKADIIVSELLG 1343
AKQADRRIKLYAVEKNPNAVVTLENWQFEEWGSQVTVVSSDMREWVAPEKADIIVSELLG
Sbjct: 334 AKQADRRIKLYAVEKNPNAVVTLENWQFEEWGSQVTVVSSDMREWVAPEKADIIVSELLG 393
Query: 1344 SFADNELSPECLDGAQHFLKNDGLSI 1421
SFADNELSPECLDGAQHFLK+DG+SI
Sbjct: 394 SFADNELSPECLDGAQHFLKDDGVSI 419
>ref|XP_857323.1| PREDICTED: similar to SKB1 homolog isoform 6 [Canis familiaris].
Length = 576
Score = 765 bits (1976), Expect = 0.0
Identities = 381/437 (87%), Positives = 388/437 (88%)
Frame = +3
Query: 111 DTLGAVAKQGFDFLCMPVFHPRFKREFTQEPAKNRPGPQTRSDLLLSGRDWNTLIVGKLS 290
D L +QGFDFLCMPVFHPRFKREFTQEPAKNRPGPQTRSDLLLSGR
Sbjct: 11 DRLVIPERQGFDFLCMPVFHPRFKREFTQEPAKNRPGPQTRSDLLLSGR----------- 59
Query: 291 PWIRPDSKVEKIRRNSEAAMLQELNFGAYLGLPAFLLPLNQEDNTNLARVLTNHIHTGHH 470
AFLLPLNQEDNTNLARVLTNHIHTGHH
Sbjct: 60 ---------------------------------AFLLPLNQEDNTNLARVLTNHIHTGHH 86
Query: 471 SSMFWMRVPLVAPEDLRDDIIENAPASHTEEYSGEEKTWMWWHNFRTLCDYSKRIAVALE 650
SSMFWMRVPLVAPEDLRDDIIENAP++HTEEYSGEEKTWMWWHNFRTLCDYSKRIAVALE
Sbjct: 87 SSMFWMRVPLVAPEDLRDDIIENAPSTHTEEYSGEEKTWMWWHNFRTLCDYSKRIAVALE 146
Query: 651 IGADLPSNHVIDRWLGEPIKAAILPTSIFLTNKKGFPVLSKMHQRLIFRLLKLEVQFIIT 830
IGADLPSNHVIDRWLGEPIKAAILPTSIFLTNKKGFPVLSKMHQRLIFRLLKLEVQFIIT
Sbjct: 147 IGADLPSNHVIDRWLGEPIKAAILPTSIFLTNKKGFPVLSKMHQRLIFRLLKLEVQFIIT 206
Query: 831 GTNHHSEKEFCSYLQYLEYLSQNRPPPNAYELFAKGYEDYLQSPLQPLMDNLESQTYEVF 1010
GTNHHSEKEFCSYLQYLEYLSQNRPPPNAYELFAKGYEDYLQSPLQPLMDNLESQTYEVF
Sbjct: 207 GTNHHSEKEFCSYLQYLEYLSQNRPPPNAYELFAKGYEDYLQSPLQPLMDNLESQTYEVF 266
Query: 1011 EKDPIKYSQYQQAIYKCLLDRVPEEEKDTNVQVLMVLGAGRGPLVNASLRAAKQADRRIK 1190
EKDPIKYSQYQQAIYKCLLDRVP+EEKDTN+QVLMVLGAGRGPLVNASLRAAKQADRRIK
Sbjct: 267 EKDPIKYSQYQQAIYKCLLDRVPDEEKDTNIQVLMVLGAGRGPLVNASLRAAKQADRRIK 326
Query: 1191 LYAVEKNPNAVVTLENWQFEEWGSQVTVVSSDMREWVAPEKADIIVSELLGSFADNELSP 1370
LYAVEKNPNAVVTLENWQFEEWGSQVTVVSSDMREWVAPEKADIIVSELLGSFADNELSP
Sbjct: 327 LYAVEKNPNAVVTLENWQFEEWGSQVTVVSSDMREWVAPEKADIIVSELLGSFADNELSP 386
Query: 1371 ECLDGAQHFLKNDGLSI 1421
ECLDGAQHFLK+DG+SI
Sbjct: 387 ECLDGAQHFLKDDGVSI 403
>ref|XP_857487.1| PREDICTED: similar to SKB1 homolog isoform 10 [Canis familiaris].
Length = 531
Score = 726 bits (1875), Expect = 0.0
Identities = 352/358 (98%), Positives = 358/358 (100%)
Frame = +3
Query: 348 MLQELNFGAYLGLPAFLLPLNQEDNTNLARVLTNHIHTGHHSSMFWMRVPLVAPEDLRDD 527
MLQELNFGAYLGLPAFLLPLNQEDNTNLARVLTNHIHTGHHSSMFWMRVPLVAPEDLRDD
Sbjct: 1 MLQELNFGAYLGLPAFLLPLNQEDNTNLARVLTNHIHTGHHSSMFWMRVPLVAPEDLRDD 60
Query: 528 IIENAPASHTEEYSGEEKTWMWWHNFRTLCDYSKRIAVALEIGADLPSNHVIDRWLGEPI 707
IIENAP++HTEEYSGEEKTWMWWHNFRTLCDYSKRIAVALEIGADLPSNHVIDRWLGEPI
Sbjct: 61 IIENAPSTHTEEYSGEEKTWMWWHNFRTLCDYSKRIAVALEIGADLPSNHVIDRWLGEPI 120
Query: 708 KAAILPTSIFLTNKKGFPVLSKMHQRLIFRLLKLEVQFIITGTNHHSEKEFCSYLQYLEY 887
KAAILPTSIFLTNKKGFPVLSKMHQRLIFRLLKLEVQFIITGTNHHSEKEFCSYLQYLEY
Sbjct: 121 KAAILPTSIFLTNKKGFPVLSKMHQRLIFRLLKLEVQFIITGTNHHSEKEFCSYLQYLEY 180
Query: 888 LSQNRPPPNAYELFAKGYEDYLQSPLQPLMDNLESQTYEVFEKDPIKYSQYQQAIYKCLL 1067
LSQNRPPPNAYELFAKGYEDYLQSPLQPLMDNLESQTYEVFEKDPIKYSQYQQAIYKCLL
Sbjct: 181 LSQNRPPPNAYELFAKGYEDYLQSPLQPLMDNLESQTYEVFEKDPIKYSQYQQAIYKCLL 240
Query: 1068 DRVPEEEKDTNVQVLMVLGAGRGPLVNASLRAAKQADRRIKLYAVEKNPNAVVTLENWQF 1247
DRVP+EEKDTN+QVLMVLGAGRGPLVNASLRAAKQADRRIKLYAVEKNPNAVVTLENWQF
Sbjct: 241 DRVPDEEKDTNIQVLMVLGAGRGPLVNASLRAAKQADRRIKLYAVEKNPNAVVTLENWQF 300
Query: 1248 EEWGSQVTVVSSDMREWVAPEKADIIVSELLGSFADNELSPECLDGAQHFLKNDGLSI 1421
EEWGSQVTVVSSDMREWVAPEKADIIVSELLGSFADNELSPECLDGAQHFLK+DG+SI
Sbjct: 301 EEWGSQVTVVSSDMREWVAPEKADIIVSELLGSFADNELSPECLDGAQHFLKDDGVSI 358
>ref|XP_857288.1| PREDICTED: similar to SKB1 homolog isoform 5 [Canis familiaris].
Length = 528
Score = 412 bits (1060), Expect = e-115
Identities = 201/205 (98%), Positives = 205/205 (100%)
Frame = +3
Query: 807 LEVQFIITGTNHHSEKEFCSYLQYLEYLSQNRPPPNAYELFAKGYEDYLQSPLQPLMDNL 986
LEVQFIITGTNHHSEKEFCSYLQYLEYLSQNRPPPNAYELFAKGYEDYLQSPLQPLMDNL
Sbjct: 151 LEVQFIITGTNHHSEKEFCSYLQYLEYLSQNRPPPNAYELFAKGYEDYLQSPLQPLMDNL 210
Query: 987 ESQTYEVFEKDPIKYSQYQQAIYKCLLDRVPEEEKDTNVQVLMVLGAGRGPLVNASLRAA 1166
ESQTYEVFEKDPIKYSQYQQAIYKCLLDRVP+EEKDTN+QVLMVLGAGRGPLVNASLRAA
Sbjct: 211 ESQTYEVFEKDPIKYSQYQQAIYKCLLDRVPDEEKDTNIQVLMVLGAGRGPLVNASLRAA 270
Query: 1167 KQADRRIKLYAVEKNPNAVVTLENWQFEEWGSQVTVVSSDMREWVAPEKADIIVSELLGS 1346
KQADRRIKLYAVEKNPNAVVTLENWQFEEWGSQVTVVSSDMREWVAPEKADIIVSELLGS
Sbjct: 271 KQADRRIKLYAVEKNPNAVVTLENWQFEEWGSQVTVVSSDMREWVAPEKADIIVSELLGS 330
Query: 1347 FADNELSPECLDGAQHFLKNDGLSI 1421
FADNELSPECLDGAQHFLK+DG+SI
Sbjct: 331 FADNELSPECLDGAQHFLKDDGVSI 355
Score = 275 bits (704), Expect = 6e-74
Identities = 132/132 (100%), Positives = 132/132 (100%)
Frame = +3
Query: 84 DLNCVPEIADTLGAVAKQGFDFLCMPVFHPRFKREFTQEPAKNRPGPQTRSDLLLSGRDW 263
DLNCVPEIADTLGAVAKQGFDFLCMPVFHPRFKREFTQEPAKNRPGPQTRSDLLLSGRDW
Sbjct: 19 DLNCVPEIADTLGAVAKQGFDFLCMPVFHPRFKREFTQEPAKNRPGPQTRSDLLLSGRDW 78
Query: 264 NTLIVGKLSPWIRPDSKVEKIRRNSEAAMLQELNFGAYLGLPAFLLPLNQEDNTNLARVL 443
NTLIVGKLSPWIRPDSKVEKIRRNSEAAMLQELNFGAYLGLPAFLLPLNQEDNTNLARVL
Sbjct: 79 NTLIVGKLSPWIRPDSKVEKIRRNSEAAMLQELNFGAYLGLPAFLLPLNQEDNTNLARVL 138
Query: 444 TNHIHTGHHSSM 479
TNHIHTGHHSSM
Sbjct: 139 TNHIHTGHHSSM 150
>ref|XP_857246.1| PREDICTED: similar to SKB1 homolog isoform 4 [Canis familiaris].
Length = 483
Score = 412 bits (1060), Expect = e-115
Identities = 201/205 (98%), Positives = 205/205 (100%)
Frame = +3
Query: 807 LEVQFIITGTNHHSEKEFCSYLQYLEYLSQNRPPPNAYELFAKGYEDYLQSPLQPLMDNL 986
LEVQFIITGTNHHSEKEFCSYLQYLEYLSQNRPPPNAYELFAKGYEDYLQSPLQPLMDNL
Sbjct: 106 LEVQFIITGTNHHSEKEFCSYLQYLEYLSQNRPPPNAYELFAKGYEDYLQSPLQPLMDNL 165
Query: 987 ESQTYEVFEKDPIKYSQYQQAIYKCLLDRVPEEEKDTNVQVLMVLGAGRGPLVNASLRAA 1166
ESQTYEVFEKDPIKYSQYQQAIYKCLLDRVP+EEKDTN+QVLMVLGAGRGPLVNASLRAA
Sbjct: 166 ESQTYEVFEKDPIKYSQYQQAIYKCLLDRVPDEEKDTNIQVLMVLGAGRGPLVNASLRAA 225
Query: 1167 KQADRRIKLYAVEKNPNAVVTLENWQFEEWGSQVTVVSSDMREWVAPEKADIIVSELLGS 1346
KQADRRIKLYAVEKNPNAVVTLENWQFEEWGSQVTVVSSDMREWVAPEKADIIVSELLGS
Sbjct: 226 KQADRRIKLYAVEKNPNAVVTLENWQFEEWGSQVTVVSSDMREWVAPEKADIIVSELLGS 285
Query: 1347 FADNELSPECLDGAQHFLKNDGLSI 1421
FADNELSPECLDGAQHFLK+DG+SI
Sbjct: 286 FADNELSPECLDGAQHFLKDDGVSI 310
Score = 185 bits (470), Expect = 8e-47
Identities = 88/91 (96%), Positives = 89/91 (97%)
Frame = +3
Query: 84 DLNCVPEIADTLGAVAKQGFDFLCMPVFHPRFKREFTQEPAKNRPGPQTRSDLLLSGRDW 263
DLNCVPEIADTLGAVAKQGFDFLCMPVFHPRFKREFTQEPAKNRPGPQTRSDLLLSGRDW
Sbjct: 19 DLNCVPEIADTLGAVAKQGFDFLCMPVFHPRFKREFTQEPAKNRPGPQTRSDLLLSGRDW 78
Query: 264 NTLIVGKLSPWIRPDSKVEKIRRNSEAAMLQ 356
NTLIVGKLSPWIRPDSKVEKIRRNSEA +Q
Sbjct: 79 NTLIVGKLSPWIRPDSKVEKIRRNSEALEVQ 109
>ref|XP_857199.1| PREDICTED: similar to SKB1 homolog isoform 3 [Canis familiaris].
Length = 466
Score = 412 bits (1060), Expect = e-115
Identities = 201/205 (98%), Positives = 205/205 (100%)
Frame = +3
Query: 807 LEVQFIITGTNHHSEKEFCSYLQYLEYLSQNRPPPNAYELFAKGYEDYLQSPLQPLMDNL 986
LEVQFIITGTNHHSEKEFCSYLQYLEYLSQNRPPPNAYELFAKGYEDYLQSPLQPLMDNL
Sbjct: 89 LEVQFIITGTNHHSEKEFCSYLQYLEYLSQNRPPPNAYELFAKGYEDYLQSPLQPLMDNL 148
Query: 987 ESQTYEVFEKDPIKYSQYQQAIYKCLLDRVPEEEKDTNVQVLMVLGAGRGPLVNASLRAA 1166
ESQTYEVFEKDPIKYSQYQQAIYKCLLDRVP+EEKDTN+QVLMVLGAGRGPLVNASLRAA
Sbjct: 149 ESQTYEVFEKDPIKYSQYQQAIYKCLLDRVPDEEKDTNIQVLMVLGAGRGPLVNASLRAA 208
Query: 1167 KQADRRIKLYAVEKNPNAVVTLENWQFEEWGSQVTVVSSDMREWVAPEKADIIVSELLGS 1346
KQADRRIKLYAVEKNPNAVVTLENWQFEEWGSQVTVVSSDMREWVAPEKADIIVSELLGS
Sbjct: 209 KQADRRIKLYAVEKNPNAVVTLENWQFEEWGSQVTVVSSDMREWVAPEKADIIVSELLGS 268
Query: 1347 FADNELSPECLDGAQHFLKNDGLSI 1421
FADNELSPECLDGAQHFLK+DG+SI
Sbjct: 269 FADNELSPECLDGAQHFLKDDGVSI 293
Score = 153 bits (387), Expect = 3e-37
Identities = 73/82 (89%), Positives = 75/82 (91%)
Frame = +3
Query: 111 DTLGAVAKQGFDFLCMPVFHPRFKREFTQEPAKNRPGPQTRSDLLLSGRDWNTLIVGKLS 290
D L +QGFDFLCMPVFHPRFKREFTQEPAKNRPGPQTRSDLLLSGRDWNTLIVGKLS
Sbjct: 11 DRLVIPERQGFDFLCMPVFHPRFKREFTQEPAKNRPGPQTRSDLLLSGRDWNTLIVGKLS 70
Query: 291 PWIRPDSKVEKIRRNSEAAMLQ 356
PWIRPDSKVEKIRRNSEA +Q
Sbjct: 71 PWIRPDSKVEKIRRNSEALEVQ 92
Database: RefSeq49_CP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,874,504
Number of sequences in database: 33,336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33336
Number of Hits to DB: 62,816,915
Number of extensions: 1799068
Number of successful extensions: 5819
Number of sequences better than 1.0e-05: 10
Number of HSP's gapped: 5812
Number of HSP's successfully gapped: 16
Length of query: 474
Length of database: 18,874,504
Length adjustment: 107
Effective length of query: 367
Effective length of database: 15,307,552
Effective search space: 5617871584
Effective search space used: 5617871584
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Animal-Genome cDNA 20110601C-013376
Search to RefSeqBP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-013376
(1422 letters)
Database: RefSeq49_BP.fasta
33,088 sequences; 17,681,374 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001098844.1| protein arginine N-methyltransferase 5 [Bos ... 904 0.0
>ref|NP_001098844.1| protein arginine N-methyltransferase 5 [Bos taurus].
Length = 637
Score = 904 bits (2336), Expect = 0.0
Identities = 440/446 (98%), Positives = 444/446 (99%)
Frame = +3
Query: 84 DLNCVPEIADTLGAVAKQGFDFLCMPVFHPRFKREFTQEPAKNRPGPQTRSDLLLSGRDW 263
DLNCVPEIADTLGAVAKQGFDFLCMPVFHPRFKREFTQEPAK+RPGPQTRSDLLLSGRDW
Sbjct: 19 DLNCVPEIADTLGAVAKQGFDFLCMPVFHPRFKREFTQEPAKSRPGPQTRSDLLLSGRDW 78
Query: 264 NTLIVGKLSPWIRPDSKVEKIRRNSEAAMLQELNFGAYLGLPAFLLPLNQEDNTNLARVL 443
NTLIVGKLSPWIRPDSKVEKIRRNSEAAMLQELNFGAYLGLPAFLLPLNQEDNTNLARVL
Sbjct: 79 NTLIVGKLSPWIRPDSKVEKIRRNSEAAMLQELNFGAYLGLPAFLLPLNQEDNTNLARVL 138
Query: 444 TNHIHTGHHSSMFWMRVPLVAPEDLRDDIIENAPASHTEEYSGEEKTWMWWHNFRTLCDY 623
TNHIHTGHHSSMFWMRVPLVAPEDLRDDIIENAP SHTEEYSGEEKTWMWWHNFRTLCDY
Sbjct: 139 TNHIHTGHHSSMFWMRVPLVAPEDLRDDIIENAPTSHTEEYSGEEKTWMWWHNFRTLCDY 198
Query: 624 SKRIAVALEIGADLPSNHVIDRWLGEPIKAAILPTSIFLTNKKGFPVLSKMHQRLIFRLL 803
SKRIAVALEIGADLPSNHVIDRWLGEPIKAAILPTSIFLTNKKGFPVLSKMHQRLIFRLL
Sbjct: 199 SKRIAVALEIGADLPSNHVIDRWLGEPIKAAILPTSIFLTNKKGFPVLSKMHQRLIFRLL 258
Query: 804 KLEVQFIITGTNHHSEKEFCSYLQYLEYLSQNRPPPNAYELFAKGYEDYLQSPLQPLMDN 983
KLEVQFIITGTNHHSEKEFCSYLQYLEYLSQNRPPPNAYELFAKGYEDYLQSPLQPLMDN
Sbjct: 259 KLEVQFIITGTNHHSEKEFCSYLQYLEYLSQNRPPPNAYELFAKGYEDYLQSPLQPLMDN 318
Query: 984 LESQTYEVFEKDPIKYSQYQQAIYKCLLDRVPEEEKDTNVQVLMVLGAGRGPLVNASLRA 1163
LESQTYEVFEKDPIKYSQYQQAIYKCLLDRVPEEEKDTN+QVLMVLGAGRGPLVNASLRA
Sbjct: 319 LESQTYEVFEKDPIKYSQYQQAIYKCLLDRVPEEEKDTNIQVLMVLGAGRGPLVNASLRA 378
Query: 1164 AKQADRRIKLYAVEKNPNAVVTLENWQFEEWGSQVTVVSSDMREWVAPEKADIIVSELLG 1343
AKQADRRIKLYAVEKNPNAVVTLENWQFEEWGSQVTVVSSDMREWVAPEKADIIVSELLG
Sbjct: 379 AKQADRRIKLYAVEKNPNAVVTLENWQFEEWGSQVTVVSSDMREWVAPEKADIIVSELLG 438
Query: 1344 SFADNELSPECLDGAQHFLKNDGLSI 1421
SFADNELSPE LDGAQHFLK+DG+SI
Sbjct: 439 SFADNELSPESLDGAQHFLKDDGVSI 464
Database: RefSeq49_BP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 17,681,374
Number of sequences in database: 33,088
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33088
Number of Hits to DB: 60,150,886
Number of extensions: 1740997
Number of successful extensions: 5708
Number of sequences better than 1.0e-05: 1
Number of HSP's gapped: 5708
Number of HSP's successfully gapped: 1
Length of query: 474
Length of database: 17,681,374
Length adjustment: 106
Effective length of query: 368
Effective length of database: 14,174,046
Effective search space: 5216048928
Effective search space used: 5216048928
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to RefSeqSP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-013376
(1422 letters)
Database: RefSeq49_SP.fasta
24,897 sequences; 11,343,932 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001153565.1| protein arginine N-methyltransferase 5 [Sus ... 912 0.0
>ref|NP_001153565.1| protein arginine N-methyltransferase 5 [Sus scrofa].
Length = 637
Score = 912 bits (2356), Expect = 0.0
Identities = 444/446 (99%), Positives = 446/446 (100%)
Frame = +3
Query: 84 DLNCVPEIADTLGAVAKQGFDFLCMPVFHPRFKREFTQEPAKNRPGPQTRSDLLLSGRDW 263
DLNCVPEIADTLGAVAKQGFDFLCMPVFHPRFKREFTQEPAKNRPGPQTRSDLLLSGRDW
Sbjct: 19 DLNCVPEIADTLGAVAKQGFDFLCMPVFHPRFKREFTQEPAKNRPGPQTRSDLLLSGRDW 78
Query: 264 NTLIVGKLSPWIRPDSKVEKIRRNSEAAMLQELNFGAYLGLPAFLLPLNQEDNTNLARVL 443
NTLIVGKLSPWIRPDSKVEKIRRNSEAAMLQELNFGAYLGLPAFLLPLNQEDNTNLARVL
Sbjct: 79 NTLIVGKLSPWIRPDSKVEKIRRNSEAAMLQELNFGAYLGLPAFLLPLNQEDNTNLARVL 138
Query: 444 TNHIHTGHHSSMFWMRVPLVAPEDLRDDIIENAPASHTEEYSGEEKTWMWWHNFRTLCDY 623
TNHIHTGHHSSMFWMRVPLVAPEDLRDDIIENAPASHTEEYSGEEKTWMWWHNFRTLCDY
Sbjct: 139 TNHIHTGHHSSMFWMRVPLVAPEDLRDDIIENAPASHTEEYSGEEKTWMWWHNFRTLCDY 198
Query: 624 SKRIAVALEIGADLPSNHVIDRWLGEPIKAAILPTSIFLTNKKGFPVLSKMHQRLIFRLL 803
SKRIAVALEIGADLPSNHVIDRWLGEPIKAAILPTSIFLTNKKGFPVLSKMHQRLIFRLL
Sbjct: 199 SKRIAVALEIGADLPSNHVIDRWLGEPIKAAILPTSIFLTNKKGFPVLSKMHQRLIFRLL 258
Query: 804 KLEVQFIITGTNHHSEKEFCSYLQYLEYLSQNRPPPNAYELFAKGYEDYLQSPLQPLMDN 983
KLEVQFIITGTNHHSEKEFCSYLQYLEYLSQNRPPPNAYELFAKGYEDYLQSPLQPLMDN
Sbjct: 259 KLEVQFIITGTNHHSEKEFCSYLQYLEYLSQNRPPPNAYELFAKGYEDYLQSPLQPLMDN 318
Query: 984 LESQTYEVFEKDPIKYSQYQQAIYKCLLDRVPEEEKDTNVQVLMVLGAGRGPLVNASLRA 1163
LESQTYEVFEKDPIKYSQYQQAIYKCLLDRVPEEEKDTNVQVLMVLGAGRGPLVNASLRA
Sbjct: 319 LESQTYEVFEKDPIKYSQYQQAIYKCLLDRVPEEEKDTNVQVLMVLGAGRGPLVNASLRA 378
Query: 1164 AKQADRRIKLYAVEKNPNAVVTLENWQFEEWGSQVTVVSSDMREWVAPEKADIIVSELLG 1343
AKQADRRIKLYAVEKNPNAVVTLENWQFEEWGSQVTVVSSDMREWVAPEKADIIVSELLG
Sbjct: 379 AKQADRRIKLYAVEKNPNAVVTLENWQFEEWGSQVTVVSSDMREWVAPEKADIIVSELLG 438
Query: 1344 SFADNELSPECLDGAQHFLKNDGLSI 1421
SFADNELSPECLDGAQHFLK+DG+SI
Sbjct: 439 SFADNELSPECLDGAQHFLKDDGVSI 464
Database: RefSeq49_SP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 11,343,932
Number of sequences in database: 24,897
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 24897
Number of Hits to DB: 38,774,997
Number of extensions: 1120195
Number of successful extensions: 3665
Number of sequences better than 1.0e-05: 1
Number of HSP's gapped: 3658
Number of HSP's successfully gapped: 1
Length of query: 474
Length of database: 11,343,932
Length adjustment: 103
Effective length of query: 371
Effective length of database: 8,779,541
Effective search space: 3257209711
Effective search space used: 3257209711
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to RefSeqMP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-013376
(1422 letters)
Database: RefSeq49_MP.fasta
30,036 sequences; 15,617,559 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_038796.2| protein arginine N-methyltransferase 5 [Mus mus... 895 0.0
>ref|NP_038796.2| protein arginine N-methyltransferase 5 [Mus musculus].
Length = 637
Score = 895 bits (2314), Expect = 0.0
Identities = 434/446 (97%), Positives = 442/446 (99%)
Frame = +3
Query: 84 DLNCVPEIADTLGAVAKQGFDFLCMPVFHPRFKREFTQEPAKNRPGPQTRSDLLLSGRDW 263
DLNCVPEIADTLGAVAKQGFDFLCMPVFHPRFKREF QEPAKNRPGPQTRSDLLLSGRDW
Sbjct: 19 DLNCVPEIADTLGAVAKQGFDFLCMPVFHPRFKREFIQEPAKNRPGPQTRSDLLLSGRDW 78
Query: 264 NTLIVGKLSPWIRPDSKVEKIRRNSEAAMLQELNFGAYLGLPAFLLPLNQEDNTNLARVL 443
NTLIVGKLSPWI PDSKVEKIRRNSEAAMLQELNFGAYLGLPAFLLPLNQEDNTNLARVL
Sbjct: 79 NTLIVGKLSPWIHPDSKVEKIRRNSEAAMLQELNFGAYLGLPAFLLPLNQEDNTNLARVL 138
Query: 444 TNHIHTGHHSSMFWMRVPLVAPEDLRDDIIENAPASHTEEYSGEEKTWMWWHNFRTLCDY 623
TNHIHTGHHSSMFWMRVPLVAPEDLRDD+IENAP +HTEEYSGEEKTWMWWHNFRTLCDY
Sbjct: 139 TNHIHTGHHSSMFWMRVPLVAPEDLRDDVIENAPTTHTEEYSGEEKTWMWWHNFRTLCDY 198
Query: 624 SKRIAVALEIGADLPSNHVIDRWLGEPIKAAILPTSIFLTNKKGFPVLSKMHQRLIFRLL 803
SKRIAVALEIGADLPSNHVIDRWLGEPIKAAILPTSIFLTNKKGFPVLSK+ QRLIFRLL
Sbjct: 199 SKRIAVALEIGADLPSNHVIDRWLGEPIKAAILPTSIFLTNKKGFPVLSKVQQRLIFRLL 258
Query: 804 KLEVQFIITGTNHHSEKEFCSYLQYLEYLSQNRPPPNAYELFAKGYEDYLQSPLQPLMDN 983
KLEVQFIITGTNHHSEKEFCSYLQYLEYLSQNRPPPNAYELFAKGYEDYLQSPLQPLMDN
Sbjct: 259 KLEVQFIITGTNHHSEKEFCSYLQYLEYLSQNRPPPNAYELFAKGYEDYLQSPLQPLMDN 318
Query: 984 LESQTYEVFEKDPIKYSQYQQAIYKCLLDRVPEEEKDTNVQVLMVLGAGRGPLVNASLRA 1163
LESQTYEVFEKDPIKYSQYQQAIYKCLLDRVPEEEK+TNVQVLMVLGAGRGPLVNASLRA
Sbjct: 319 LESQTYEVFEKDPIKYSQYQQAIYKCLLDRVPEEEKETNVQVLMVLGAGRGPLVNASLRA 378
Query: 1164 AKQADRRIKLYAVEKNPNAVVTLENWQFEEWGSQVTVVSSDMREWVAPEKADIIVSELLG 1343
AKQA+RRI+LYAVEKNPNAVVTLENWQFEEWGSQVTVVSSDMREWVAPEKADIIVSELLG
Sbjct: 379 AKQAERRIRLYAVEKNPNAVVTLENWQFEEWGSQVTVVSSDMREWVAPEKADIIVSELLG 438
Query: 1344 SFADNELSPECLDGAQHFLKNDGLSI 1421
SFADNELSPECLDGAQHFLK+DG+SI
Sbjct: 439 SFADNELSPECLDGAQHFLKDDGVSI 464
Database: RefSeq49_MP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 15,617,559
Number of sequences in database: 30,036
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 30036
Number of Hits to DB: 52,156,002
Number of extensions: 1481297
Number of successful extensions: 4866
Number of sequences better than 1.0e-05: 1
Number of HSP's gapped: 4864
Number of HSP's successfully gapped: 1
Length of query: 474
Length of database: 15,617,559
Length adjustment: 105
Effective length of query: 369
Effective length of database: 12,463,779
Effective search space: 4599134451
Effective search space used: 4599134451
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to RefSeqHP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-013376
(1422 letters)
Database: RefSeq49_HP.fasta
32,964 sequences; 18,297,164 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_006100.2| protein arginine N-methyltransferase 5 isoform ... 907 0.0
Alignment gi|NP_001034708.1| protein arginine N-methyltransferase 5 isofo... 875 0.0
>ref|NP_006100.2| protein arginine N-methyltransferase 5 isoform a [Homo sapiens].
Length = 637
Score = 907 bits (2343), Expect = 0.0
Identities = 441/446 (98%), Positives = 444/446 (99%)
Frame = +3
Query: 84 DLNCVPEIADTLGAVAKQGFDFLCMPVFHPRFKREFTQEPAKNRPGPQTRSDLLLSGRDW 263
DLNCVPEIADTLGAVAKQGFDFLCMPVFHPRFKREF QEPAKNRPGPQTRSDLLLSGRDW
Sbjct: 19 DLNCVPEIADTLGAVAKQGFDFLCMPVFHPRFKREFIQEPAKNRPGPQTRSDLLLSGRDW 78
Query: 264 NTLIVGKLSPWIRPDSKVEKIRRNSEAAMLQELNFGAYLGLPAFLLPLNQEDNTNLARVL 443
NTLIVGKLSPWIRPDSKVEKIRRNSEAAMLQELNFGAYLGLPAFLLPLNQEDNTNLARVL
Sbjct: 79 NTLIVGKLSPWIRPDSKVEKIRRNSEAAMLQELNFGAYLGLPAFLLPLNQEDNTNLARVL 138
Query: 444 TNHIHTGHHSSMFWMRVPLVAPEDLRDDIIENAPASHTEEYSGEEKTWMWWHNFRTLCDY 623
TNHIHTGHHSSMFWMRVPLVAPEDLRDDIIENAP +HTEEYSGEEKTWMWWHNFRTLCDY
Sbjct: 139 TNHIHTGHHSSMFWMRVPLVAPEDLRDDIIENAPTTHTEEYSGEEKTWMWWHNFRTLCDY 198
Query: 624 SKRIAVALEIGADLPSNHVIDRWLGEPIKAAILPTSIFLTNKKGFPVLSKMHQRLIFRLL 803
SKRIAVALEIGADLPSNHVIDRWLGEPIKAAILPTSIFLTNKKGFPVLSKMHQRLIFRLL
Sbjct: 199 SKRIAVALEIGADLPSNHVIDRWLGEPIKAAILPTSIFLTNKKGFPVLSKMHQRLIFRLL 258
Query: 804 KLEVQFIITGTNHHSEKEFCSYLQYLEYLSQNRPPPNAYELFAKGYEDYLQSPLQPLMDN 983
KLEVQFIITGTNHHSEKEFCSYLQYLEYLSQNRPPPNAYELFAKGYEDYLQSPLQPLMDN
Sbjct: 259 KLEVQFIITGTNHHSEKEFCSYLQYLEYLSQNRPPPNAYELFAKGYEDYLQSPLQPLMDN 318
Query: 984 LESQTYEVFEKDPIKYSQYQQAIYKCLLDRVPEEEKDTNVQVLMVLGAGRGPLVNASLRA 1163
LESQTYEVFEKDPIKYSQYQQAIYKCLLDRVPEEEKDTNVQVLMVLGAGRGPLVNASLRA
Sbjct: 319 LESQTYEVFEKDPIKYSQYQQAIYKCLLDRVPEEEKDTNVQVLMVLGAGRGPLVNASLRA 378
Query: 1164 AKQADRRIKLYAVEKNPNAVVTLENWQFEEWGSQVTVVSSDMREWVAPEKADIIVSELLG 1343
AKQADRRIKLYAVEKNPNAVVTLENWQFEEWGSQVTVVSSDMREWVAPEKADIIVSELLG
Sbjct: 379 AKQADRRIKLYAVEKNPNAVVTLENWQFEEWGSQVTVVSSDMREWVAPEKADIIVSELLG 438
Query: 1344 SFADNELSPECLDGAQHFLKNDGLSI 1421
SFADNELSPECLDGAQHFLK+DG+SI
Sbjct: 439 SFADNELSPECLDGAQHFLKDDGVSI 464
>ref|NP_001034708.1| protein arginine N-methyltransferase 5 isoform b [Homo sapiens].
Length = 620
Score = 875 bits (2261), Expect = 0.0
Identities = 425/430 (98%), Positives = 428/430 (99%)
Frame = +3
Query: 132 KQGFDFLCMPVFHPRFKREFTQEPAKNRPGPQTRSDLLLSGRDWNTLIVGKLSPWIRPDS 311
KQGFDFLCMPVFHPRFKREF QEPAKNRPGPQTRSDLLLSGRDWNTLIVGKLSPWIRPDS
Sbjct: 18 KQGFDFLCMPVFHPRFKREFIQEPAKNRPGPQTRSDLLLSGRDWNTLIVGKLSPWIRPDS 77
Query: 312 KVEKIRRNSEAAMLQELNFGAYLGLPAFLLPLNQEDNTNLARVLTNHIHTGHHSSMFWMR 491
KVEKIRRNSEAAMLQELNFGAYLGLPAFLLPLNQEDNTNLARVLTNHIHTGHHSSMFWMR
Sbjct: 78 KVEKIRRNSEAAMLQELNFGAYLGLPAFLLPLNQEDNTNLARVLTNHIHTGHHSSMFWMR 137
Query: 492 VPLVAPEDLRDDIIENAPASHTEEYSGEEKTWMWWHNFRTLCDYSKRIAVALEIGADLPS 671
VPLVAPEDLRDDIIENAP +HTEEYSGEEKTWMWWHNFRTLCDYSKRIAVALEIGADLPS
Sbjct: 138 VPLVAPEDLRDDIIENAPTTHTEEYSGEEKTWMWWHNFRTLCDYSKRIAVALEIGADLPS 197
Query: 672 NHVIDRWLGEPIKAAILPTSIFLTNKKGFPVLSKMHQRLIFRLLKLEVQFIITGTNHHSE 851
NHVIDRWLGEPIKAAILPTSIFLTNKKGFPVLSKMHQRLIFRLLKLEVQFIITGTNHHSE
Sbjct: 198 NHVIDRWLGEPIKAAILPTSIFLTNKKGFPVLSKMHQRLIFRLLKLEVQFIITGTNHHSE 257
Query: 852 KEFCSYLQYLEYLSQNRPPPNAYELFAKGYEDYLQSPLQPLMDNLESQTYEVFEKDPIKY 1031
KEFCSYLQYLEYLSQNRPPPNAYELFAKGYEDYLQSPLQPLMDNLESQTYEVFEKDPIKY
Sbjct: 258 KEFCSYLQYLEYLSQNRPPPNAYELFAKGYEDYLQSPLQPLMDNLESQTYEVFEKDPIKY 317
Query: 1032 SQYQQAIYKCLLDRVPEEEKDTNVQVLMVLGAGRGPLVNASLRAAKQADRRIKLYAVEKN 1211
SQYQQAIYKCLLDRVPEEEKDTNVQVLMVLGAGRGPLVNASLRAAKQADRRIKLYAVEKN
Sbjct: 318 SQYQQAIYKCLLDRVPEEEKDTNVQVLMVLGAGRGPLVNASLRAAKQADRRIKLYAVEKN 377
Query: 1212 PNAVVTLENWQFEEWGSQVTVVSSDMREWVAPEKADIIVSELLGSFADNELSPECLDGAQ 1391
PNAVVTLENWQFEEWGSQVTVVSSDMREWVAPEKADIIVSELLGSFADNELSPECLDGAQ
Sbjct: 378 PNAVVTLENWQFEEWGSQVTVVSSDMREWVAPEKADIIVSELLGSFADNELSPECLDGAQ 437
Query: 1392 HFLKNDGLSI 1421
HFLK+DG+SI
Sbjct: 438 HFLKDDGVSI 447
Database: RefSeq49_HP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,297,164
Number of sequences in database: 32,964
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 32964
Number of Hits to DB: 61,698,680
Number of extensions: 1767882
Number of successful extensions: 5667
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 5658
Number of HSP's successfully gapped: 2
Length of query: 474
Length of database: 18,297,164
Length adjustment: 106
Effective length of query: 368
Effective length of database: 14,802,980
Effective search space: 5447496640
Effective search space used: 5447496640
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to Sscrofa10_2
BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-013376
(1422 letters)
Database: Sscrofa_10.2.fasta
4582 sequences; 2,808,509,378 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|GL896267.1| Sus scrofa unplaced genomic scaffold chrU_scaffol... 347 1e-92
>gb|GL896267.1| Sus scrofa unplaced genomic scaffold chrU_scaffold624
Length = 76922
Score = 347 bits (175), Expect = 1e-92
Identities = 175/175 (100%)
Strand = Plus / Plus
Query: 1229 gctggagaattggcagtttgaagaatggggaagccaggtgacagtagtctcctcggacat 1288
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9047 gctggagaattggcagtttgaagaatggggaagccaggtgacagtagtctcctcggacat 9106
Query: 1289 gcgggaatgggtggctccagagaaagcagatatcattgtcagtgagcttctggggtcctt 1348
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9107 gcgggaatgggtggctccagagaaagcagatatcattgtcagtgagcttctggggtcctt 9166
Query: 1349 cgctgacaatgagctgtcacccgagtgcctggatggagcccagcacttcttaaaa 1403
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9167 cgctgacaatgagctgtcacccgagtgcctggatggagcccagcacttcttaaaa 9221
Score = 327 bits (165), Expect = 1e-86
Identities = 165/165 (100%)
Strand = Plus / Plus
Query: 642 gctcttgaaattggtgctgaccttccatctaatcatgtcattgatcgttggcttggggag 701
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7582 gctcttgaaattggtgctgaccttccatctaatcatgtcattgatcgttggcttggggag 7641
Query: 702 cccatcaaagcagccattctccccaccagcattttcctgaccaataagaagggatttcct 761
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7642 cccatcaaagcagccattctccccaccagcattttcctgaccaataagaagggatttcct 7701
Query: 762 gttctttctaagatgcatcagaggctgatcttccgactcctcaag 806
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7702 gttctttctaagatgcatcagaggctgatcttccgactcctcaag 7746
Score = 325 bits (164), Expect = 4e-86
Identities = 164/164 (100%)
Strand = Plus / Plus
Query: 805 agttggaggtgcagttcatcattacaggcaccaaccaccactcagagaaggagttctgct 864
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8201 agttggaggtgcagttcatcattacaggcaccaaccaccactcagagaaggagttctgct 8260
Query: 865 cctacctccaatacttagaatacttgagccagaaccgacctccacccaatgcctacgaac 924
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8261 cctacctccaatacttagaatacttgagccagaaccgacctccacccaatgcctacgaac 8320
Query: 925 tctttgccaagggctatgaagactacctgcagtccccactccag 968
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8321 tctttgccaagggctatgaagactacctgcagtccccactccag 8364
Score = 280 bits (141), Expect = 2e-72
Identities = 141/141 (100%)
Strand = Plus / Plus
Query: 1 atctcggcgtggactgcgcgagggaaaagatggcggcgatggcggtcggcggtgccggtg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4505 atctcggcgtggactgcgcgagggaaaagatggcggcgatggcggtcggcggtgccggtg 4564
Query: 61 gaagccgcgtgtccagcgggagggacctgaattgcgtccccgaaatagctgacacactgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4565 gaagccgcgtgtccagcgggagggacctgaattgcgtccccgaaatagctgacacactgg 4624
Query: 121 gggctgtggccaagcaggggt 141
|||||||||||||||||||||
Sbjct: 4625 gggctgtggccaagcaggggt 4645
Score = 270 bits (136), Expect = 2e-69
Identities = 136/136 (100%)
Strand = Plus / Plus
Query: 344 ggctatgttacaggagctgaattttggggcctatttgggtcttccagctttcctgctgcc 403
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6102 ggctatgttacaggagctgaattttggggcctatttgggtcttccagctttcctgctgcc 6161
Query: 404 cctaaatcaggaagataacacaaacttggcaagagttttgactaatcacatccacactgg 463
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6162 cctaaatcaggaagataacacaaacttggcaagagttttgactaatcacatccacactgg 6221
Query: 464 ccaccactcctccatg 479
||||||||||||||||
Sbjct: 6222 ccaccactcctccatg 6237
Score = 246 bits (124), Expect = 3e-62
Identities = 124/124 (100%)
Strand = Plus / Plus
Query: 1106 agtgctcatggtgctgggagcgggccgggggcccctggtgaatgcctccctgcgggcagc 1165
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8838 agtgctcatggtgctgggagcgggccgggggcccctggtgaatgcctccctgcgggcagc 8897
Query: 1166 caagcaggctgaccggcggataaagctgtacgctgtggagaagaacccaaatgctgtggt 1225
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8898 caagcaggctgaccggcggataaagctgtacgctgtggagaagaacccaaatgctgtggt 8957
Query: 1226 gacg 1229
||||
Sbjct: 8958 gacg 8961
Score = 238 bits (120), Expect = 7e-60
Identities = 120/120 (100%)
Strand = Plus / Plus
Query: 139 ggtttgatttcctctgcatgcctgtcttccacccgcgtttcaagagggagttcactcagg 198
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5403 ggtttgatttcctctgcatgcctgtcttccacccgcgtttcaagagggagttcactcagg 5462
Query: 199 aacctgctaagaatcggccgggtccccagacacgatcagacctactgctgtcaggaaggg 258
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5463 aacctgctaagaatcggccgggtccccagacacgatcagacctactgctgtcaggaaggg 5522
Score = 230 bits (116), Expect = 2e-57
Identities = 116/116 (100%)
Strand = Plus / Plus
Query: 479 gttctggatgcgggtgccattggtggcaccagaggacctaagagatgatataatcgagaa 538
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7081 gttctggatgcgggtgccattggtggcaccagaggacctaagagatgatataatcgagaa 7140
Query: 539 tgcaccagcatcacacacagaggagtacagcggagaggagaagacgtggatgtggt 594
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7141 tgcaccagcatcacacacagaggagtacagcggagaggagaagacgtggatgtggt 7196
Score = 174 bits (88), Expect = 9e-41
Identities = 88/88 (100%)
Strand = Plus / Plus
Query: 258 gactggaatacactaattgtgggcaagctttccccatggattcgtccagactcaaaagtg 317
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5831 gactggaatacactaattgtgggcaagctttccccatggattcgtccagactcaaaagtg 5890
Query: 318 gagaagatccgcaggaactctgaggcgg 345
||||||||||||||||||||||||||||
Sbjct: 5891 gagaagatccgcaggaactctgaggcgg 5918
Score = 163 bits (82), Expect = 3e-37
Identities = 82/82 (100%)
Strand = Plus / Plus
Query: 966 cagccactgatggataatctggaatctcaaacatatgaagtgtttgaaaaggaccccatc 1025
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8533 cagccactgatggataatctggaatctcaaacatatgaagtgtttgaaaaggaccccatc 8592
Query: 1026 aaatactctcaataccagcagg 1047
||||||||||||||||||||||
Sbjct: 8593 aaatactctcaataccagcagg 8614
Score = 123 bits (62), Expect = 3e-25
Identities = 62/62 (100%)
Strand = Plus / Plus
Query: 1044 caggccatctataaatgtctattagaccgagtgccagaggaggagaaggacaccaacgtc 1103
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8692 caggccatctataaatgtctattagaccgagtgccagaggaggagaaggacaccaacgtc 8751
Query: 1104 ca 1105
||
Sbjct: 8752 ca 8753
Score = 101 bits (51), Expect = 1e-18
Identities = 51/51 (100%)
Strand = Plus / Plus
Query: 592 ggtggcacaacttccgaaccttgtgtgactatagcaaaaggattgcggtgg 642
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7338 ggtggcacaacttccgaaccttgtgtgactatagcaaaaggattgcggtgg 7388
Database: Sscrofa_10.2.fasta
Posted date: Nov 16, 2011 10:34 AM
Number of letters in database: 2,808,509,378
Number of sequences in database: 4582
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4582
Number of Hits to DB: 40,569,471
Number of extensions: 212
Number of successful extensions: 212
Number of sequences better than 1.0e-05: 1
Number of HSP's gapped: 212
Number of HSP's successfully gapped: 12
Length of query: 1422
Length of database: 2,808,509,378
Length adjustment: 21
Effective length of query: 1401
Effective length of database: 2,808,413,156
Effective search space: 3934586831556
Effective search space used: 3934586831556
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 18 (36.2 bits)
S2: 30 (60.0 bits)