Search to RefSeqBP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-013432
(1715 letters)
Database: RefSeq49_BP.fasta
33,088 sequences; 17,681,374 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_777212.1| serine/threonine-protein phosphatase 2B catalyt... 610 e-178
Alignment gi|NP_001092684.1| serine/threonine-protein phosphatase 2B cata... 527 e-153
Alignment gi|NP_001091545.1| serine/threonine-protein phosphatase 2B cata... 522 e-152
Alignment gi|NP_001069325.1| serine/threonine-protein phosphatase 2A cata... 212 3e-55
Alignment gi|NP_001092578.1| serine/threonine-protein phosphatase 4 catal... 209 5e-54
Alignment gi|NP_851374.1| serine/threonine-protein phosphatase 2A catalyt... 207 1e-53
Alignment gi|NP_001030393.1| serine/threonine-protein phosphatase PP1-alp... 206 3e-53
Alignment gi|XP_002683644.1| PREDICTED: protein phosphatase 1, catalytic ... 206 3e-53
Alignment gi|NP_777006.1| serine/threonine-protein phosphatase PP1-gamma ... 206 3e-53
Alignment gi|NP_001124222.1| serine/threonine-protein phosphatase 6 catal... 205 9e-53
>ref|NP_777212.1| serine/threonine-protein phosphatase 2B catalytic subunit alpha
isoform [Bos taurus].
Length = 521
Score = 610 bits (1573), Expect(2) = e-178
Identities = 293/296 (98%), Positives = 293/296 (98%)
Frame = +1
Query: 784 MSEPKAIDPKLSTTDRVVKAVPFPPSHRLTAKEVFDNDGKPRVDILKAHLMKEGRLEENV 963
MSEPKAIDPKLSTTDRVVKAVPFPPSHRLTAKEVFDNDGKPRVDILKAHLMKEGRLEE V
Sbjct: 1 MSEPKAIDPKLSTTDRVVKAVPFPPSHRLTAKEVFDNDGKPRVDILKAHLMKEGRLEETV 60
Query: 964 ALRIITEGASILRQEKNLLDIDAPVTVCGDIHGQFFDLMKLFEVGGSPANTRYLFLGDYV 1143
ALRIITEGASILRQEKNLLDIDAPVTVCGDIHGQFFDLMKLFEVGGSPANTRYLFLGDYV
Sbjct: 61 ALRIITEGASILRQEKNLLDIDAPVTVCGDIHGQFFDLMKLFEVGGSPANTRYLFLGDYV 120
Query: 1144 DRGYFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEYFTFKQECKIKYSEHVYDACMD 1323
DRGYFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEYFTFKQECKIKYSE VYDACMD
Sbjct: 121 DRGYFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEYFTFKQECKIKYSERVYDACMD 180
Query: 1324 AFDCLPLAALMNQQFLCVHGGLSPEINTLDDIRKLDRFKEPPAYGPMCDILWSDPLEDFG 1503
AFDCLPLAALMNQQFLCVHGGLSPEINTLDDIRKLDRFKEPPAYGPMCDILWSDPLEDFG
Sbjct: 181 AFDCLPLAALMNQQFLCVHGGLSPEINTLDDIRKLDRFKEPPAYGPMCDILWSDPLEDFG 240
Query: 1504 NEKTQEHFTHNTVRGCSYFYSYPAVCEFLQHNNLLSILRAHEAQDAGYRMYRKS*T 1671
NEKTQEHFTHNTVRGCSYFYSYPAVCEFLQHNNLLSILRAHEAQDAGYRMYRKS T
Sbjct: 241 NEKTQEHFTHNTVRGCSYFYSYPAVCEFLQHNNLLSILRAHEAQDAGYRMYRKSQT 296
Score = 35.0 bits (79), Expect(2) = e-178
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +3
Query: 1671 TGFPSLITIFSAPNY 1715
TGFPSLITIFSAPNY
Sbjct: 297 TGFPSLITIFSAPNY 311
>ref|NP_001092684.1| serine/threonine-protein phosphatase 2B catalytic subunit beta
isoform [Bos taurus].
Length = 525
Score = 527 bits (1358), Expect(2) = e-153
Identities = 244/293 (83%), Positives = 272/293 (92%)
Frame = +1
Query: 793 PKAIDPKLSTTDRVVKAVPFPPSHRLTAKEVFDNDGKPRVDILKAHLMKEGRLEENVALR 972
P P DRVVKAVPFPP+HRLT++EVFD DG PRVD+LK HL+KEGR++E +ALR
Sbjct: 13 PPPPPPPPPGADRVVKAVPFPPTHRLTSEEVFDMDGIPRVDVLKNHLVKEGRVDEEIALR 72
Query: 973 IITEGASILRQEKNLLDIDAPVTVCGDIHGQFFDLMKLFEVGGSPANTRYLFLGDYVDRG 1152
II EGA+ILR+EK +++++AP+TVCGDIHGQFFDLMKLFEVGGSPANTRYLFLGDYVDRG
Sbjct: 73 IINEGAAILRREKTMIEVEAPITVCGDIHGQFFDLMKLFEVGGSPANTRYLFLGDYVDRG 132
Query: 1153 YFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEYFTFKQECKIKYSEHVYDACMDAFD 1332
YFSIECVLYLW LKILYP TLFLLRGNHECRHLTEYFTFKQECKIKYSE VY+ACM+AFD
Sbjct: 133 YFSIECVLYLWVLKILYPSTLFLLRGNHECRHLTEYFTFKQECKIKYSERVYEACMEAFD 192
Query: 1333 CLPLAALMNQQFLCVHGGLSPEINTLDDIRKLDRFKEPPAYGPMCDILWSDPLEDFGNEK 1512
LPLAAL+NQQFLCVHGGLSPEI+TLDDIR+LDRFKEPPA+GPMCD+LWSDP EDFGNEK
Sbjct: 193 SLPLAALLNQQFLCVHGGLSPEIHTLDDIRRLDRFKEPPAFGPMCDLLWSDPSEDFGNEK 252
Query: 1513 TQEHFTHNTVRGCSYFYSYPAVCEFLQHNNLLSILRAHEAQDAGYRMYRKS*T 1671
+QEHF+HNTVRGCSYFY+YPAVCEFLQ+NNLLSI+RAHEAQDAGYRMYRKS T
Sbjct: 253 SQEHFSHNTVRGCSYFYNYPAVCEFLQNNNLLSIIRAHEAQDAGYRMYRKSQT 305
Score = 35.0 bits (79), Expect(2) = e-153
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +3
Query: 1671 TGFPSLITIFSAPNY 1715
TGFPSLITIFSAPNY
Sbjct: 306 TGFPSLITIFSAPNY 320
>ref|NP_001091545.1| serine/threonine-protein phosphatase 2B catalytic subunit gamma
isoform [Bos taurus].
Length = 512
Score = 522 bits (1345), Expect(2) = e-152
Identities = 240/284 (84%), Positives = 270/284 (95%)
Frame = +1
Query: 814 LSTTDRVVKAVPFPPSHRLTAKEVFDNDGKPRVDILKAHLMKEGRLEENVALRIITEGAS 993
LSTT+RV+KAVPFPP+ RL+ KEVF+N GKP++D+LK HL+KEGRLEE VAL+II +GA+
Sbjct: 8 LSTTERVIKAVPFPPTQRLSLKEVFEN-GKPKIDVLKNHLVKEGRLEEEVALKIINDGAA 66
Query: 994 ILRQEKNLLDIDAPVTVCGDIHGQFFDLMKLFEVGGSPANTRYLFLGDYVDRGYFSIECV 1173
ILRQEK ++++DAPVTVCGDIHGQFFDLMKLFEVGGSP+NTRYLFLGDYVDRGYFSIECV
Sbjct: 67 ILRQEKTMIEVDAPVTVCGDIHGQFFDLMKLFEVGGSPSNTRYLFLGDYVDRGYFSIECV 126
Query: 1174 LYLWALKILYPKTLFLLRGNHECRHLTEYFTFKQECKIKYSEHVYDACMDAFDCLPLAAL 1353
LYLW+LKI +PKTLFLLRGNHECRHLTEYFTFKQEC+IKYSE VYDACM+ FDCLPLAAL
Sbjct: 127 LYLWSLKINHPKTLFLLRGNHECRHLTEYFTFKQECRIKYSEQVYDACMETFDCLPLAAL 186
Query: 1354 MNQQFLCVHGGLSPEINTLDDIRKLDRFKEPPAYGPMCDILWSDPLEDFGNEKTQEHFTH 1533
+NQQFLCVHGG+SPEI LDDIRKLDRFKEPPA+GP+CD+LWSDP ED+GNEKT EH+TH
Sbjct: 187 LNQQFLCVHGGMSPEITCLDDIRKLDRFKEPPAFGPVCDLLWSDPSEDYGNEKTLEHYTH 246
Query: 1534 NTVRGCSYFYSYPAVCEFLQHNNLLSILRAHEAQDAGYRMYRKS 1665
NTVRGCSYFYSYPAVCEFLQ+NNLLSI+RAHEAQDAGYRMYRKS
Sbjct: 247 NTVRGCSYFYSYPAVCEFLQNNNLLSIIRAHEAQDAGYRMYRKS 290
Score = 35.0 bits (79), Expect(2) = e-152
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +3
Query: 1671 TGFPSLITIFSAPNY 1715
TGFPSLITIFSAPNY
Sbjct: 293 TGFPSLITIFSAPNY 307
>ref|NP_001069325.1| serine/threonine-protein phosphatase 2A catalytic subunit beta
isoform [Bos taurus].
Length = 309
Score = 212 bits (540), Expect(2) = 3e-55
Identities = 110/235 (46%), Positives = 145/235 (61%), Gaps = 1/235 (0%)
Frame = +1
Query: 946 RLEENVALRIITEGASILRQEKNLLDIDAPVTVCGDIHGQFFDLMKLFEVGGSPANTRYL 1125
+L EN + + IL +E N+ ++ PVTVCGD+HGQF DLM+LF +GG +T YL
Sbjct: 22 QLNENQVRTLCEKAKEILTKESNVQEVRCPVTVCGDVHGQFHDLMELFRIGGKSPDTNYL 81
Query: 1126 FLGDYVDRGYFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEYFTFKQECKIKY-SEH 1302
F+GDYVDRGY+S+E V L ALK+ YP+ + +LRGNHE R +T+ + F EC KY + +
Sbjct: 82 FMGDYVDRGYYSVETVTLLVALKVRYPERITILRGNHESRQITQVYGFYDECLRKYGNAN 141
Query: 1303 VYDACMDAFDCLPLAALMNQQFLCVHGGLSPEINTLDDIRKLDRFKEPPAYGPMCDILWS 1482
V+ D FD LPL AL++ Q C+HGGLSP I+TLD IR LDR +E P GPMCD+LWS
Sbjct: 142 VWKYFTDLFDYLPLTALVDGQIFCLHGGLSPSIDTLDHIRALDRLQEVPHEGPMCDLLWS 201
Query: 1483 DPLEDFGNEKTQEHFTHNTVRGCSYFYSYPAVCEFLQHNNLLSILRAHEAQDAGY 1647
DP +D G + RG Y + F N L + RAH+ GY
Sbjct: 202 DP-DDRGGWGI-------SPRGAGYTFGQDISETFNHANGLTLVSRAHQLVMEGY 248
Score = 23.1 bits (48), Expect(2) = 3e-55
Identities = 8/11 (72%), Positives = 11/11 (100%)
Frame = +3
Query: 1683 SLITIFSAPNY 1715
+++TIFSAPNY
Sbjct: 255 NVVTIFSAPNY 265
>ref|NP_001092578.1| serine/threonine-protein phosphatase 4 catalytic subunit [Bos
taurus].
Length = 307
Score = 209 bits (533), Expect = 5e-54
Identities = 106/237 (44%), Positives = 147/237 (62%), Gaps = 1/237 (0%)
Frame = +1
Query: 949 LEENVALRIITEGASILRQEKNLLDIDAPVTVCGDIHGQFFDLMKLFEVGGSPANTRYLF 1128
++E+ + + IL +E N+ +D+PVTVCGDIHGQF+DL +LF VGG T YLF
Sbjct: 20 IKESEVKALCAKAREILVEESNVQRVDSPVTVCGDIHGQFYDLKELFRVGGDVPETNYLF 79
Query: 1129 LGDYVDRGYFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEYFTFKQECKIKY-SEHV 1305
+GD+VDRG++S+E L L ALK+ YP + L+RGNHE R +T+ + F EC KY S V
Sbjct: 80 MGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSVTV 139
Query: 1306 YDACMDAFDCLPLAALMNQQFLCVHGGLSPEINTLDDIRKLDRFKEPPAYGPMCDILWSD 1485
+ C + FD L L+A+++ + CVHGGLSP I TLD IR +DR +E P GPMCD+LWSD
Sbjct: 140 WRYCTEIFDYLSLSAIIDGKIFCVHGGLSPSIQTLDQIRTIDRKQEVPHDGPMCDLLWSD 199
Query: 1486 PLEDFGNEKTQEHFTHNTVRGCSYFYSYPAVCEFLQHNNLLSILRAHEAQDAGYRMY 1656
P + G + RG Y + V +F N++ I RAH+ GY+ +
Sbjct: 200 PEDTTG--------WGVSPRGAGYLFGSDVVAQFNAANDIDMICRAHQLVMEGYKWH 248
>ref|NP_851374.1| serine/threonine-protein phosphatase 2A catalytic subunit alpha
isoform [Bos taurus].
Length = 309
Score = 207 bits (526), Expect(2) = 1e-53
Identities = 108/235 (45%), Positives = 144/235 (61%), Gaps = 1/235 (0%)
Frame = +1
Query: 946 RLEENVALRIITEGASILRQEKNLLDIDAPVTVCGDIHGQFFDLMKLFEVGGSPANTRYL 1125
+L E+ + + IL +E N+ ++ PVTVCGD+HGQF DLM+LF +GG +T YL
Sbjct: 22 QLSESQVKSLCEKAKEILTKESNVQEVRCPVTVCGDVHGQFHDLMELFRIGGKSPDTNYL 81
Query: 1126 FLGDYVDRGYFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEYFTFKQECKIKY-SEH 1302
F+GDYVDRGY+S+E V L ALK+ Y + + +LRGNHE R +T+ + F EC KY + +
Sbjct: 82 FMGDYVDRGYYSVETVTLLVALKVRYRERITILRGNHESRQITQVYGFYDECLRKYGNAN 141
Query: 1303 VYDACMDAFDCLPLAALMNQQFLCVHGGLSPEINTLDDIRKLDRFKEPPAYGPMCDILWS 1482
V+ D FD LPL AL++ Q C+HGGLSP I+TLD IR LDR +E P GPMCD+LWS
Sbjct: 142 VWKYFTDLFDYLPLTALVDGQIFCLHGGLSPSIDTLDHIRALDRLQEVPHEGPMCDLLWS 201
Query: 1483 DPLEDFGNEKTQEHFTHNTVRGCSYFYSYPAVCEFLQHNNLLSILRAHEAQDAGY 1647
DP +D G + RG Y + F N L + RAH+ GY
Sbjct: 202 DP-DDRGGWGI-------SPRGAGYTFGQDISETFNHANGLTLVSRAHQLVMEGY 248
Score = 23.1 bits (48), Expect(2) = 1e-53
Identities = 8/11 (72%), Positives = 11/11 (100%)
Frame = +3
Query: 1683 SLITIFSAPNY 1715
+++TIFSAPNY
Sbjct: 255 NVVTIFSAPNY 265
>ref|NP_001030393.1| serine/threonine-protein phosphatase PP1-alpha catalytic subunit [Bos
taurus].
Length = 330
Score = 206 bits (523), Expect(2) = 3e-53
Identities = 99/242 (40%), Positives = 150/242 (61%)
Frame = +1
Query: 937 KEGRLEENVALRIITEGASILRQEKNLLDIDAPVTVCGDIHGQFFDLMKLFEVGGSPANT 1116
K +L EN + + I + LL+++AP+ +CGDIHGQ++DL++LFE GG P +
Sbjct: 26 KNVQLTENEIRGLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPES 85
Query: 1117 RYLFLGDYVDRGYFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEYFTFKQECKIKYS 1296
YLFLGDYVDRG S+E + L A KI YP+ FLLRGNHEC + + F ECK +Y+
Sbjct: 86 NYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYN 145
Query: 1297 EHVYDACMDAFDCLPLAALMNQQFLCVHGGLSPEINTLDDIRKLDRFKEPPAYGPMCDIL 1476
++ D F+CLP+AA+++++ C HGGLSP++ +++ IR++ R + P G +CD+L
Sbjct: 146 IKLWKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLL 205
Query: 1477 WSDPLEDFGNEKTQEHFTHNTVRGCSYFYSYPAVCEFLQHNNLLSILRAHEAQDAGYRMY 1656
WSDP +K + + N RG S+ + V +FL ++L I RAH+ + GY +
Sbjct: 206 WSDP------DKDVQGWGEND-RGVSFTFGAEVVAKFLHKHDLDLICRAHQVVEDGYEFF 258
Query: 1657 RK 1662
K
Sbjct: 259 AK 260
Score = 23.1 bits (48), Expect(2) = 3e-53
Identities = 8/10 (80%), Positives = 10/10 (100%)
Frame = +3
Query: 1686 LITIFSAPNY 1715
L+T+FSAPNY
Sbjct: 263 LVTLFSAPNY 272
>ref|XP_002683644.1| PREDICTED: protein phosphatase 1, catalytic subunit, alpha-like
isoform 1 [Bos taurus].
Length = 330
Score = 206 bits (523), Expect(2) = 3e-53
Identities = 99/242 (40%), Positives = 150/242 (61%)
Frame = +1
Query: 937 KEGRLEENVALRIITEGASILRQEKNLLDIDAPVTVCGDIHGQFFDLMKLFEVGGSPANT 1116
K +L EN + + I + LL+++AP+ +CGDIHGQ++DL++LFE GG P +
Sbjct: 26 KNVQLTENEIRGLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPES 85
Query: 1117 RYLFLGDYVDRGYFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEYFTFKQECKIKYS 1296
YLFLGDYVDRG S+E + L A KI YP+ FLLRGNHEC + + F ECK +Y+
Sbjct: 86 NYLFLGDYVDRGKQSLETICLLLAYKIRYPENFFLLRGNHECASINRIYGFYDECKRRYN 145
Query: 1297 EHVYDACMDAFDCLPLAALMNQQFLCVHGGLSPEINTLDDIRKLDRFKEPPAYGPMCDIL 1476
++ D F+CLP+AA+++++ C HGGLSP++ +++ IR++ R + P G +CD+L
Sbjct: 146 IKLWKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLL 205
Query: 1477 WSDPLEDFGNEKTQEHFTHNTVRGCSYFYSYPAVCEFLQHNNLLSILRAHEAQDAGYRMY 1656
WSDP +K + + N RG S+ + V +FL ++L I RAH+ + GY +
Sbjct: 206 WSDP------DKDVQGWGEND-RGVSFTFGAEVVAKFLHKHDLDLICRAHQVVEDGYEFF 258
Query: 1657 RK 1662
K
Sbjct: 259 AK 260
Score = 23.1 bits (48), Expect(2) = 3e-53
Identities = 8/10 (80%), Positives = 10/10 (100%)
Frame = +3
Query: 1686 LITIFSAPNY 1715
L+T+FSAPNY
Sbjct: 263 LVTLFSAPNY 272
>ref|NP_777006.1| serine/threonine-protein phosphatase PP1-gamma catalytic subunit [Bos
taurus].
Length = 323
Score = 206 bits (523), Expect(2) = 3e-53
Identities = 98/242 (40%), Positives = 149/242 (61%)
Frame = +1
Query: 937 KEGRLEENVALRIITEGASILRQEKNLLDIDAPVTVCGDIHGQFFDLMKLFEVGGSPANT 1116
K +L+EN + + I + LL+++AP+ +CGDIHGQ++DL++LFE GG P +
Sbjct: 26 KNVQLQENEIRGLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPES 85
Query: 1117 RYLFLGDYVDRGYFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEYFTFKQECKIKYS 1296
YLFLGDYVDRG S+E + L A KI YP+ FLLRGNHEC + + F ECK +Y+
Sbjct: 86 NYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYN 145
Query: 1297 EHVYDACMDAFDCLPLAALMNQQFLCVHGGLSPEINTLDDIRKLDRFKEPPAYGPMCDIL 1476
++ D F+CLP+AA+++++ C HGGLSP++ +++ IR++ R + P G +CD+L
Sbjct: 146 IKLWKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLL 205
Query: 1477 WSDPLEDFGNEKTQEHFTHNTVRGCSYFYSYPAVCEFLQHNNLLSILRAHEAQDAGYRMY 1656
WSDP +D + RG S+ + V +FL ++L I RAH+ + GY +
Sbjct: 206 WSDPDKDVLGWGEND-------RGVSFTFGAEVVAKFLHKHDLDLICRAHQVVEDGYEFF 258
Query: 1657 RK 1662
K
Sbjct: 259 AK 260
Score = 23.1 bits (48), Expect(2) = 3e-53
Identities = 8/10 (80%), Positives = 10/10 (100%)
Frame = +3
Query: 1686 LITIFSAPNY 1715
L+T+FSAPNY
Sbjct: 263 LVTLFSAPNY 272
>ref|NP_001124222.1| serine/threonine-protein phosphatase 6 catalytic subunit [Bos
taurus].
Length = 305
Score = 205 bits (522), Expect = 9e-53
Identities = 105/235 (44%), Positives = 143/235 (60%), Gaps = 1/235 (0%)
Frame = +1
Query: 949 LEENVALRIITEGASILRQEKNLLDIDAPVTVCGDIHGQFFDLMKLFEVGGSPANTRYLF 1128
L EN R+ +L +E N+ + PVTVCGDIHGQF+DL +LF GG +T Y+F
Sbjct: 19 LPENDLKRLCDYVCDLLLEESNVQPVSTPVTVCGDIHGQFYDLCELFRTGGQVPDTNYIF 78
Query: 1129 LGDYVDRGYFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEYFTFKQECKIKY-SEHV 1305
+GD+VDRGY+S+E YL ALK +P + LLRGNHE R +T+ + F EC+ KY + +
Sbjct: 79 MGDFVDRGYYSLETFTYLLALKAKWPDRITLLRGNHESRQITQVYGFYDECQTKYGNANA 138
Query: 1306 YDACMDAFDCLPLAALMNQQFLCVHGGLSPEINTLDDIRKLDRFKEPPAYGPMCDILWSD 1485
+ C FD L +AAL+++Q LCVHGGLSP+I TLD IR ++R +E P G CD++WSD
Sbjct: 139 WRYCTKVFDMLTVAALIDEQILCVHGGLSPDIKTLDQIRTIERNQEIPHKGAFCDLVWSD 198
Query: 1486 PLEDFGNEKTQEHFTHNTVRGCSYFYSYPAVCEFLQHNNLLSILRAHEAQDAGYR 1650
P ED + RG + + EF+ NNL I RAH+ GY+
Sbjct: 199 P-EDVDTWAI-------SPRGAGWLFGAKVTNEFVHINNLKLICRAHQLVHEGYK 245
Database: RefSeq49_BP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 17,681,374
Number of sequences in database: 33,088
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33088
Number of Hits to DB: 58,896,593
Number of extensions: 1612071
Number of successful extensions: 6064
Number of sequences better than 1.0e-05: 18
Number of HSP's gapped: 6000
Number of HSP's successfully gapped: 30
Length of query: 571
Length of database: 17,681,374
Length adjustment: 108
Effective length of query: 463
Effective length of database: 14,107,870
Effective search space: 6531943810
Effective search space used: 6531943810
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Animal-Genome cDNA 20110601C-013432
Search to RefSeqCP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-013432
(1715 letters)
Database: RefSeq49_CP.fasta
33,336 sequences; 18,874,504 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001184025.1| serine/threonine-protein phosphatase 2B cata... 610 e-178
Alignment gi|XP_862667.1| PREDICTED: similar to protein phosphatase 3, ca... 527 e-153
Alignment gi|XP_850935.1| PREDICTED: similar to protein phosphatase 3 (fo... 527 e-153
Alignment gi|XP_862697.1| PREDICTED: similar to protein phosphatase 3, ca... 527 e-153
Alignment gi|XP_862643.1| PREDICTED: similar to protein phosphatase 3, ca... 527 e-153
Alignment gi|XP_862602.1| PREDICTED: similar to protein phosphatase 3, ca... 527 e-153
Alignment gi|XP_536390.1| PREDICTED: similar to protein phosphatase 3 (fo... 527 e-153
Alignment gi|XP_862527.1| PREDICTED: similar to protein phosphatase 3 (fo... 527 e-153
Alignment gi|XP_862503.1| PREDICTED: similar to Serine/threonine protein ... 527 e-153
Alignment gi|XP_851300.1| PREDICTED: similar to protein phosphatase 3 (fo... 520 e-151
>ref|NP_001184025.1| serine/threonine-protein phosphatase 2B catalytic subunit alpha
isoform [Canis lupus familiaris].
Length = 521
Score = 610 bits (1574), Expect(2) = e-178
Identities = 293/296 (98%), Positives = 294/296 (99%)
Frame = +1
Query: 784 MSEPKAIDPKLSTTDRVVKAVPFPPSHRLTAKEVFDNDGKPRVDILKAHLMKEGRLEENV 963
MSEPKAIDPKLSTTDRVVKAVPFPPSHRLTAKEVFDNDGKPRVDILKAHLMKEGRLEE+V
Sbjct: 1 MSEPKAIDPKLSTTDRVVKAVPFPPSHRLTAKEVFDNDGKPRVDILKAHLMKEGRLEESV 60
Query: 964 ALRIITEGASILRQEKNLLDIDAPVTVCGDIHGQFFDLMKLFEVGGSPANTRYLFLGDYV 1143
ALRIITEGASILRQEKNLLDIDAPVTVCGDIHGQFFDLMKLFEVGGSPANTRYLFLGDYV
Sbjct: 61 ALRIITEGASILRQEKNLLDIDAPVTVCGDIHGQFFDLMKLFEVGGSPANTRYLFLGDYV 120
Query: 1144 DRGYFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEYFTFKQECKIKYSEHVYDACMD 1323
DRGYFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEYFTFKQECKIKYSE VYDACMD
Sbjct: 121 DRGYFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEYFTFKQECKIKYSERVYDACMD 180
Query: 1324 AFDCLPLAALMNQQFLCVHGGLSPEINTLDDIRKLDRFKEPPAYGPMCDILWSDPLEDFG 1503
AFDCLPLAALMNQQFLCVHGGLSPEINTLDDIRKLDRFKEPPAYGPMCDILWSDPLEDFG
Sbjct: 181 AFDCLPLAALMNQQFLCVHGGLSPEINTLDDIRKLDRFKEPPAYGPMCDILWSDPLEDFG 240
Query: 1504 NEKTQEHFTHNTVRGCSYFYSYPAVCEFLQHNNLLSILRAHEAQDAGYRMYRKS*T 1671
NEKTQEHFTHNTVRGCSYFYSYPAVCEFLQHNNLLSILRAHEAQDAGYRMYRKS T
Sbjct: 241 NEKTQEHFTHNTVRGCSYFYSYPAVCEFLQHNNLLSILRAHEAQDAGYRMYRKSQT 296
Score = 35.0 bits (79), Expect(2) = e-178
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +3
Query: 1671 TGFPSLITIFSAPNY 1715
TGFPSLITIFSAPNY
Sbjct: 297 TGFPSLITIFSAPNY 311
>ref|XP_862667.1| PREDICTED: similar to protein phosphatase 3, catalytic subunit, beta
isoform isoform 10 [Canis familiaris].
Length = 529
Score = 527 bits (1358), Expect(2) = e-153
Identities = 244/293 (83%), Positives = 272/293 (92%)
Frame = +1
Query: 793 PKAIDPKLSTTDRVVKAVPFPPSHRLTAKEVFDNDGKPRVDILKAHLMKEGRLEENVALR 972
P P DRVVKAVPFPP+HRLT++EVFD DG PRVD+LK HL+KEGR++E +ALR
Sbjct: 13 PPPPPPPPPGADRVVKAVPFPPTHRLTSEEVFDMDGIPRVDVLKNHLVKEGRVDEEIALR 72
Query: 973 IITEGASILRQEKNLLDIDAPVTVCGDIHGQFFDLMKLFEVGGSPANTRYLFLGDYVDRG 1152
II EGA+ILR+EK +++++AP+TVCGDIHGQFFDLMKLFEVGGSPANTRYLFLGDYVDRG
Sbjct: 73 IINEGAAILRREKTMIEVEAPITVCGDIHGQFFDLMKLFEVGGSPANTRYLFLGDYVDRG 132
Query: 1153 YFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEYFTFKQECKIKYSEHVYDACMDAFD 1332
YFSIECVLYLW LKILYP TLFLLRGNHECRHLTEYFTFKQECKIKYSE VY+ACM+AFD
Sbjct: 133 YFSIECVLYLWVLKILYPSTLFLLRGNHECRHLTEYFTFKQECKIKYSERVYEACMEAFD 192
Query: 1333 CLPLAALMNQQFLCVHGGLSPEINTLDDIRKLDRFKEPPAYGPMCDILWSDPLEDFGNEK 1512
LPLAAL+NQQFLCVHGGLSPEI+TLDDIR+LDRFKEPPA+GPMCD+LWSDP EDFGNEK
Sbjct: 193 SLPLAALLNQQFLCVHGGLSPEIHTLDDIRRLDRFKEPPAFGPMCDLLWSDPSEDFGNEK 252
Query: 1513 TQEHFTHNTVRGCSYFYSYPAVCEFLQHNNLLSILRAHEAQDAGYRMYRKS*T 1671
+QEHF+HNTVRGCSYFY+YPAVCEFLQ+NNLLSI+RAHEAQDAGYRMYRKS T
Sbjct: 253 SQEHFSHNTVRGCSYFYNYPAVCEFLQNNNLLSIIRAHEAQDAGYRMYRKSQT 305
Score = 35.0 bits (79), Expect(2) = e-153
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +3
Query: 1671 TGFPSLITIFSAPNY 1715
TGFPSLITIFSAPNY
Sbjct: 306 TGFPSLITIFSAPNY 320
>ref|XP_850935.1| PREDICTED: similar to protein phosphatase 3 (formerly 2B), catalytic
subunit, beta isoform (calcineurin A beta) isoform 2
[Canis familiaris].
Length = 524
Score = 527 bits (1358), Expect(2) = e-153
Identities = 244/293 (83%), Positives = 272/293 (92%)
Frame = +1
Query: 793 PKAIDPKLSTTDRVVKAVPFPPSHRLTAKEVFDNDGKPRVDILKAHLMKEGRLEENVALR 972
P P DRVVKAVPFPP+HRLT++EVFD DG PRVD+LK HL+KEGR++E +ALR
Sbjct: 13 PPPPPPPPPGADRVVKAVPFPPTHRLTSEEVFDMDGIPRVDVLKNHLVKEGRVDEEIALR 72
Query: 973 IITEGASILRQEKNLLDIDAPVTVCGDIHGQFFDLMKLFEVGGSPANTRYLFLGDYVDRG 1152
II EGA+ILR+EK +++++AP+TVCGDIHGQFFDLMKLFEVGGSPANTRYLFLGDYVDRG
Sbjct: 73 IINEGAAILRREKTMIEVEAPITVCGDIHGQFFDLMKLFEVGGSPANTRYLFLGDYVDRG 132
Query: 1153 YFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEYFTFKQECKIKYSEHVYDACMDAFD 1332
YFSIECVLYLW LKILYP TLFLLRGNHECRHLTEYFTFKQECKIKYSE VY+ACM+AFD
Sbjct: 133 YFSIECVLYLWVLKILYPSTLFLLRGNHECRHLTEYFTFKQECKIKYSERVYEACMEAFD 192
Query: 1333 CLPLAALMNQQFLCVHGGLSPEINTLDDIRKLDRFKEPPAYGPMCDILWSDPLEDFGNEK 1512
LPLAAL+NQQFLCVHGGLSPEI+TLDDIR+LDRFKEPPA+GPMCD+LWSDP EDFGNEK
Sbjct: 193 SLPLAALLNQQFLCVHGGLSPEIHTLDDIRRLDRFKEPPAFGPMCDLLWSDPSEDFGNEK 252
Query: 1513 TQEHFTHNTVRGCSYFYSYPAVCEFLQHNNLLSILRAHEAQDAGYRMYRKS*T 1671
+QEHF+HNTVRGCSYFY+YPAVCEFLQ+NNLLSI+RAHEAQDAGYRMYRKS T
Sbjct: 253 SQEHFSHNTVRGCSYFYNYPAVCEFLQNNNLLSIIRAHEAQDAGYRMYRKSQT 305
Score = 35.0 bits (79), Expect(2) = e-153
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +3
Query: 1671 TGFPSLITIFSAPNY 1715
TGFPSLITIFSAPNY
Sbjct: 306 TGFPSLITIFSAPNY 320
>ref|XP_862697.1| PREDICTED: similar to protein phosphatase 3, catalytic subunit, beta
isoform isoform 11 [Canis familiaris].
Length = 521
Score = 527 bits (1358), Expect(2) = e-153
Identities = 244/293 (83%), Positives = 272/293 (92%)
Frame = +1
Query: 793 PKAIDPKLSTTDRVVKAVPFPPSHRLTAKEVFDNDGKPRVDILKAHLMKEGRLEENVALR 972
P P DRVVKAVPFPP+HRLT++EVFD DG PRVD+LK HL+KEGR++E +ALR
Sbjct: 13 PPPPPPPPPGADRVVKAVPFPPTHRLTSEEVFDMDGIPRVDVLKNHLVKEGRVDEEIALR 72
Query: 973 IITEGASILRQEKNLLDIDAPVTVCGDIHGQFFDLMKLFEVGGSPANTRYLFLGDYVDRG 1152
II EGA+ILR+EK +++++AP+TVCGDIHGQFFDLMKLFEVGGSPANTRYLFLGDYVDRG
Sbjct: 73 IINEGAAILRREKTMIEVEAPITVCGDIHGQFFDLMKLFEVGGSPANTRYLFLGDYVDRG 132
Query: 1153 YFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEYFTFKQECKIKYSEHVYDACMDAFD 1332
YFSIECVLYLW LKILYP TLFLLRGNHECRHLTEYFTFKQECKIKYSE VY+ACM+AFD
Sbjct: 133 YFSIECVLYLWVLKILYPSTLFLLRGNHECRHLTEYFTFKQECKIKYSERVYEACMEAFD 192
Query: 1333 CLPLAALMNQQFLCVHGGLSPEINTLDDIRKLDRFKEPPAYGPMCDILWSDPLEDFGNEK 1512
LPLAAL+NQQFLCVHGGLSPEI+TLDDIR+LDRFKEPPA+GPMCD+LWSDP EDFGNEK
Sbjct: 193 SLPLAALLNQQFLCVHGGLSPEIHTLDDIRRLDRFKEPPAFGPMCDLLWSDPSEDFGNEK 252
Query: 1513 TQEHFTHNTVRGCSYFYSYPAVCEFLQHNNLLSILRAHEAQDAGYRMYRKS*T 1671
+QEHF+HNTVRGCSYFY+YPAVCEFLQ+NNLLSI+RAHEAQDAGYRMYRKS T
Sbjct: 253 SQEHFSHNTVRGCSYFYNYPAVCEFLQNNNLLSIIRAHEAQDAGYRMYRKSQT 305
Score = 35.0 bits (79), Expect(2) = e-153
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +3
Query: 1671 TGFPSLITIFSAPNY 1715
TGFPSLITIFSAPNY
Sbjct: 306 TGFPSLITIFSAPNY 320
>ref|XP_862643.1| PREDICTED: similar to protein phosphatase 3, catalytic subunit, beta
isoform isoform 9 [Canis familiaris].
Length = 519
Score = 527 bits (1358), Expect(2) = e-153
Identities = 244/293 (83%), Positives = 272/293 (92%)
Frame = +1
Query: 793 PKAIDPKLSTTDRVVKAVPFPPSHRLTAKEVFDNDGKPRVDILKAHLMKEGRLEENVALR 972
P P DRVVKAVPFPP+HRLT++EVFD DG PRVD+LK HL+KEGR++E +ALR
Sbjct: 13 PPPPPPPPPGADRVVKAVPFPPTHRLTSEEVFDMDGIPRVDVLKNHLVKEGRVDEEIALR 72
Query: 973 IITEGASILRQEKNLLDIDAPVTVCGDIHGQFFDLMKLFEVGGSPANTRYLFLGDYVDRG 1152
II EGA+ILR+EK +++++AP+TVCGDIHGQFFDLMKLFEVGGSPANTRYLFLGDYVDRG
Sbjct: 73 IINEGAAILRREKTMIEVEAPITVCGDIHGQFFDLMKLFEVGGSPANTRYLFLGDYVDRG 132
Query: 1153 YFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEYFTFKQECKIKYSEHVYDACMDAFD 1332
YFSIECVLYLW LKILYP TLFLLRGNHECRHLTEYFTFKQECKIKYSE VY+ACM+AFD
Sbjct: 133 YFSIECVLYLWVLKILYPSTLFLLRGNHECRHLTEYFTFKQECKIKYSERVYEACMEAFD 192
Query: 1333 CLPLAALMNQQFLCVHGGLSPEINTLDDIRKLDRFKEPPAYGPMCDILWSDPLEDFGNEK 1512
LPLAAL+NQQFLCVHGGLSPEI+TLDDIR+LDRFKEPPA+GPMCD+LWSDP EDFGNEK
Sbjct: 193 SLPLAALLNQQFLCVHGGLSPEIHTLDDIRRLDRFKEPPAFGPMCDLLWSDPSEDFGNEK 252
Query: 1513 TQEHFTHNTVRGCSYFYSYPAVCEFLQHNNLLSILRAHEAQDAGYRMYRKS*T 1671
+QEHF+HNTVRGCSYFY+YPAVCEFLQ+NNLLSI+RAHEAQDAGYRMYRKS T
Sbjct: 253 SQEHFSHNTVRGCSYFYNYPAVCEFLQNNNLLSIIRAHEAQDAGYRMYRKSQT 305
Score = 35.0 bits (79), Expect(2) = e-153
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +3
Query: 1671 TGFPSLITIFSAPNY 1715
TGFPSLITIFSAPNY
Sbjct: 306 TGFPSLITIFSAPNY 320
>ref|XP_862602.1| PREDICTED: similar to protein phosphatase 3, catalytic subunit, beta
isoform isoform 8 [Canis familiaris].
Length = 516
Score = 527 bits (1358), Expect(2) = e-153
Identities = 244/293 (83%), Positives = 272/293 (92%)
Frame = +1
Query: 793 PKAIDPKLSTTDRVVKAVPFPPSHRLTAKEVFDNDGKPRVDILKAHLMKEGRLEENVALR 972
P P DRVVKAVPFPP+HRLT++EVFD DG PRVD+LK HL+KEGR++E +ALR
Sbjct: 13 PPPPPPPPPGADRVVKAVPFPPTHRLTSEEVFDMDGIPRVDVLKNHLVKEGRVDEEIALR 72
Query: 973 IITEGASILRQEKNLLDIDAPVTVCGDIHGQFFDLMKLFEVGGSPANTRYLFLGDYVDRG 1152
II EGA+ILR+EK +++++AP+TVCGDIHGQFFDLMKLFEVGGSPANTRYLFLGDYVDRG
Sbjct: 73 IINEGAAILRREKTMIEVEAPITVCGDIHGQFFDLMKLFEVGGSPANTRYLFLGDYVDRG 132
Query: 1153 YFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEYFTFKQECKIKYSEHVYDACMDAFD 1332
YFSIECVLYLW LKILYP TLFLLRGNHECRHLTEYFTFKQECKIKYSE VY+ACM+AFD
Sbjct: 133 YFSIECVLYLWVLKILYPSTLFLLRGNHECRHLTEYFTFKQECKIKYSERVYEACMEAFD 192
Query: 1333 CLPLAALMNQQFLCVHGGLSPEINTLDDIRKLDRFKEPPAYGPMCDILWSDPLEDFGNEK 1512
LPLAAL+NQQFLCVHGGLSPEI+TLDDIR+LDRFKEPPA+GPMCD+LWSDP EDFGNEK
Sbjct: 193 SLPLAALLNQQFLCVHGGLSPEIHTLDDIRRLDRFKEPPAFGPMCDLLWSDPSEDFGNEK 252
Query: 1513 TQEHFTHNTVRGCSYFYSYPAVCEFLQHNNLLSILRAHEAQDAGYRMYRKS*T 1671
+QEHF+HNTVRGCSYFY+YPAVCEFLQ+NNLLSI+RAHEAQDAGYRMYRKS T
Sbjct: 253 SQEHFSHNTVRGCSYFYNYPAVCEFLQNNNLLSIIRAHEAQDAGYRMYRKSQT 305
Score = 35.0 bits (79), Expect(2) = e-153
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +3
Query: 1671 TGFPSLITIFSAPNY 1715
TGFPSLITIFSAPNY
Sbjct: 306 TGFPSLITIFSAPNY 320
>ref|XP_536390.1| PREDICTED: similar to protein phosphatase 3 (formerly 2B), catalytic
subunit, beta isoform (calcineurin A beta) isoform 1
[Canis familiaris].
Length = 514
Score = 527 bits (1358), Expect(2) = e-153
Identities = 244/293 (83%), Positives = 272/293 (92%)
Frame = +1
Query: 793 PKAIDPKLSTTDRVVKAVPFPPSHRLTAKEVFDNDGKPRVDILKAHLMKEGRLEENVALR 972
P P DRVVKAVPFPP+HRLT++EVFD DG PRVD+LK HL+KEGR++E +ALR
Sbjct: 13 PPPPPPPPPGADRVVKAVPFPPTHRLTSEEVFDMDGIPRVDVLKNHLVKEGRVDEEIALR 72
Query: 973 IITEGASILRQEKNLLDIDAPVTVCGDIHGQFFDLMKLFEVGGSPANTRYLFLGDYVDRG 1152
II EGA+ILR+EK +++++AP+TVCGDIHGQFFDLMKLFEVGGSPANTRYLFLGDYVDRG
Sbjct: 73 IINEGAAILRREKTMIEVEAPITVCGDIHGQFFDLMKLFEVGGSPANTRYLFLGDYVDRG 132
Query: 1153 YFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEYFTFKQECKIKYSEHVYDACMDAFD 1332
YFSIECVLYLW LKILYP TLFLLRGNHECRHLTEYFTFKQECKIKYSE VY+ACM+AFD
Sbjct: 133 YFSIECVLYLWVLKILYPSTLFLLRGNHECRHLTEYFTFKQECKIKYSERVYEACMEAFD 192
Query: 1333 CLPLAALMNQQFLCVHGGLSPEINTLDDIRKLDRFKEPPAYGPMCDILWSDPLEDFGNEK 1512
LPLAAL+NQQFLCVHGGLSPEI+TLDDIR+LDRFKEPPA+GPMCD+LWSDP EDFGNEK
Sbjct: 193 SLPLAALLNQQFLCVHGGLSPEIHTLDDIRRLDRFKEPPAFGPMCDLLWSDPSEDFGNEK 252
Query: 1513 TQEHFTHNTVRGCSYFYSYPAVCEFLQHNNLLSILRAHEAQDAGYRMYRKS*T 1671
+QEHF+HNTVRGCSYFY+YPAVCEFLQ+NNLLSI+RAHEAQDAGYRMYRKS T
Sbjct: 253 SQEHFSHNTVRGCSYFYNYPAVCEFLQNNNLLSIIRAHEAQDAGYRMYRKSQT 305
Score = 35.0 bits (79), Expect(2) = e-153
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +3
Query: 1671 TGFPSLITIFSAPNY 1715
TGFPSLITIFSAPNY
Sbjct: 306 TGFPSLITIFSAPNY 320
>ref|XP_862527.1| PREDICTED: similar to protein phosphatase 3 (formerly 2B), catalytic
subunit, beta isoform (calcineurin A beta) isoform 5
[Canis familiaris].
Length = 496
Score = 527 bits (1358), Expect(2) = e-153
Identities = 244/293 (83%), Positives = 272/293 (92%)
Frame = +1
Query: 793 PKAIDPKLSTTDRVVKAVPFPPSHRLTAKEVFDNDGKPRVDILKAHLMKEGRLEENVALR 972
P P DRVVKAVPFPP+HRLT++EVFD DG PRVD+LK HL+KEGR++E +ALR
Sbjct: 13 PPPPPPPPPGADRVVKAVPFPPTHRLTSEEVFDMDGIPRVDVLKNHLVKEGRVDEEIALR 72
Query: 973 IITEGASILRQEKNLLDIDAPVTVCGDIHGQFFDLMKLFEVGGSPANTRYLFLGDYVDRG 1152
II EGA+ILR+EK +++++AP+TVCGDIHGQFFDLMKLFEVGGSPANTRYLFLGDYVDRG
Sbjct: 73 IINEGAAILRREKTMIEVEAPITVCGDIHGQFFDLMKLFEVGGSPANTRYLFLGDYVDRG 132
Query: 1153 YFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEYFTFKQECKIKYSEHVYDACMDAFD 1332
YFSIECVLYLW LKILYP TLFLLRGNHECRHLTEYFTFKQECKIKYSE VY+ACM+AFD
Sbjct: 133 YFSIECVLYLWVLKILYPSTLFLLRGNHECRHLTEYFTFKQECKIKYSERVYEACMEAFD 192
Query: 1333 CLPLAALMNQQFLCVHGGLSPEINTLDDIRKLDRFKEPPAYGPMCDILWSDPLEDFGNEK 1512
LPLAAL+NQQFLCVHGGLSPEI+TLDDIR+LDRFKEPPA+GPMCD+LWSDP EDFGNEK
Sbjct: 193 SLPLAALLNQQFLCVHGGLSPEIHTLDDIRRLDRFKEPPAFGPMCDLLWSDPSEDFGNEK 252
Query: 1513 TQEHFTHNTVRGCSYFYSYPAVCEFLQHNNLLSILRAHEAQDAGYRMYRKS*T 1671
+QEHF+HNTVRGCSYFY+YPAVCEFLQ+NNLLSI+RAHEAQDAGYRMYRKS T
Sbjct: 253 SQEHFSHNTVRGCSYFYNYPAVCEFLQNNNLLSIIRAHEAQDAGYRMYRKSQT 305
Score = 35.0 bits (79), Expect(2) = e-153
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +3
Query: 1671 TGFPSLITIFSAPNY 1715
TGFPSLITIFSAPNY
Sbjct: 306 TGFPSLITIFSAPNY 320
>ref|XP_862503.1| PREDICTED: similar to Serine/threonine protein phosphatase 2B
catalytic subunit, beta isoform (Calmodulin-dependent
calcineurin A subunit, beta isoform) (CAM-PRP catalytic
subunit) isoform 4 [Canis familiaris].
Length = 401
Score = 527 bits (1358), Expect(2) = e-153
Identities = 244/293 (83%), Positives = 272/293 (92%)
Frame = +1
Query: 793 PKAIDPKLSTTDRVVKAVPFPPSHRLTAKEVFDNDGKPRVDILKAHLMKEGRLEENVALR 972
P P DRVVKAVPFPP+HRLT++EVFD DG PRVD+LK HL+KEGR++E +ALR
Sbjct: 13 PPPPPPPPPGADRVVKAVPFPPTHRLTSEEVFDMDGIPRVDVLKNHLVKEGRVDEEIALR 72
Query: 973 IITEGASILRQEKNLLDIDAPVTVCGDIHGQFFDLMKLFEVGGSPANTRYLFLGDYVDRG 1152
II EGA+ILR+EK +++++AP+TVCGDIHGQFFDLMKLFEVGGSPANTRYLFLGDYVDRG
Sbjct: 73 IINEGAAILRREKTMIEVEAPITVCGDIHGQFFDLMKLFEVGGSPANTRYLFLGDYVDRG 132
Query: 1153 YFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEYFTFKQECKIKYSEHVYDACMDAFD 1332
YFSIECVLYLW LKILYP TLFLLRGNHECRHLTEYFTFKQECKIKYSE VY+ACM+AFD
Sbjct: 133 YFSIECVLYLWVLKILYPSTLFLLRGNHECRHLTEYFTFKQECKIKYSERVYEACMEAFD 192
Query: 1333 CLPLAALMNQQFLCVHGGLSPEINTLDDIRKLDRFKEPPAYGPMCDILWSDPLEDFGNEK 1512
LPLAAL+NQQFLCVHGGLSPEI+TLDDIR+LDRFKEPPA+GPMCD+LWSDP EDFGNEK
Sbjct: 193 SLPLAALLNQQFLCVHGGLSPEIHTLDDIRRLDRFKEPPAFGPMCDLLWSDPSEDFGNEK 252
Query: 1513 TQEHFTHNTVRGCSYFYSYPAVCEFLQHNNLLSILRAHEAQDAGYRMYRKS*T 1671
+QEHF+HNTVRGCSYFY+YPAVCEFLQ+NNLLSI+RAHEAQDAGYRMYRKS T
Sbjct: 253 SQEHFSHNTVRGCSYFYNYPAVCEFLQNNNLLSIIRAHEAQDAGYRMYRKSQT 305
Score = 35.0 bits (79), Expect(2) = e-153
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +3
Query: 1671 TGFPSLITIFSAPNY 1715
TGFPSLITIFSAPNY
Sbjct: 306 TGFPSLITIFSAPNY 320
>ref|XP_851300.1| PREDICTED: similar to protein phosphatase 3 (formerly 2B), catalytic
subunit, gamma isoform (calcineurin A gamma) [Canis
familiaris].
Length = 592
Score = 520 bits (1338), Expect(2) = e-151
Identities = 238/286 (83%), Positives = 272/286 (95%)
Frame = +1
Query: 814 LSTTDRVVKAVPFPPSHRLTAKEVFDNDGKPRVDILKAHLMKEGRLEENVALRIITEGAS 993
LSTT+RVVKAVPFPP+ RLT KEVF+N GKP++D+LK HL+KEGRLEE VAL+II +GA+
Sbjct: 66 LSTTERVVKAVPFPPTQRLTLKEVFEN-GKPKIDVLKNHLVKEGRLEEEVALKIINDGAA 124
Query: 994 ILRQEKNLLDIDAPVTVCGDIHGQFFDLMKLFEVGGSPANTRYLFLGDYVDRGYFSIECV 1173
ILRQEK +++++AP+TVCGDIHGQFFDLMKLFEVGGSP+NTRYLFLGDYVDRGYFSIECV
Sbjct: 125 ILRQEKTMIEVEAPITVCGDIHGQFFDLMKLFEVGGSPSNTRYLFLGDYVDRGYFSIECV 184
Query: 1174 LYLWALKILYPKTLFLLRGNHECRHLTEYFTFKQECKIKYSEHVYDACMDAFDCLPLAAL 1353
L+LW+LKI +PKT+FLLRGNHECRHLTEYFTFKQEC+IKYSE VYDACM+ FDCLPLAAL
Sbjct: 185 LFLWSLKINHPKTVFLLRGNHECRHLTEYFTFKQECRIKYSEEVYDACMETFDCLPLAAL 244
Query: 1354 MNQQFLCVHGGLSPEINTLDDIRKLDRFKEPPAYGPMCDILWSDPLEDFGNEKTQEHFTH 1533
+NQQFLCVHGG+SPEI +LDDI+KLDRFKEPPA+GP+CD+LWSDP ED+GNEKT EH+TH
Sbjct: 245 LNQQFLCVHGGMSPEITSLDDIKKLDRFKEPPAFGPVCDLLWSDPSEDYGNEKTLEHYTH 304
Query: 1534 NTVRGCSYFYSYPAVCEFLQHNNLLSILRAHEAQDAGYRMYRKS*T 1671
NTVRGCSYFYSYPAVCEFLQ+NNLLSI+RAHEAQDAGYRMYRKS T
Sbjct: 305 NTVRGCSYFYSYPAVCEFLQNNNLLSIIRAHEAQDAGYRMYRKSQT 350
Score = 35.0 bits (79), Expect(2) = e-151
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +3
Query: 1671 TGFPSLITIFSAPNY 1715
TGFPSLITIFSAPNY
Sbjct: 351 TGFPSLITIFSAPNY 365
Database: RefSeq49_CP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,874,504
Number of sequences in database: 33,336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33336
Number of Hits to DB: 61,102,646
Number of extensions: 1608548
Number of successful extensions: 6287
Number of sequences better than 1.0e-05: 33
Number of HSP's gapped: 6212
Number of HSP's successfully gapped: 55
Length of query: 571
Length of database: 18,874,504
Length adjustment: 108
Effective length of query: 463
Effective length of database: 15,274,216
Effective search space: 7071962008
Effective search space used: 7071962008
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to RefSeqSP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-013432
(1715 letters)
Database: RefSeq49_SP.fasta
24,897 sequences; 11,343,932 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_999293.1| serine/threonine-protein phosphatase 2B catalyt... 615 e-180
Alignment gi|XP_001928050.2| PREDICTED: serine/threonine-protein phosphat... 527 e-153
Alignment gi|XP_001928060.1| PREDICTED: serine/threonine-protein phosphat... 527 e-153
Alignment gi|XP_001928198.3| PREDICTED: serine/threonine-protein phosphat... 524 e-152
Alignment gi|XP_003357111.1| PREDICTED: hypothetical protein LOC100627938... 275 4e-74
Alignment gi|XP_003133430.1| PREDICTED: serine/threonine-protein phosphat... 209 1e-54
Alignment gi|NP_999531.1| serine/threonine-protein phosphatase 2A catalyt... 207 7e-54
Alignment gi|NP_001038024.1| protein phosphatase 1 catalytic subunit alph... 206 2e-53
Alignment gi|NP_001038025.1| protein phosphatase 1 catalytic subunit gamm... 206 2e-53
Alignment gi|XP_001929230.1| PREDICTED: serine/threonine-protein phosphat... 205 6e-53
>ref|NP_999293.1| serine/threonine-protein phosphatase 2B catalytic subunit alpha
isoform [Sus scrofa].
Length = 511
Score = 615 bits (1587), Expect(2) = e-180
Identities = 295/296 (99%), Positives = 295/296 (99%)
Frame = +1
Query: 784 MSEPKAIDPKLSTTDRVVKAVPFPPSHRLTAKEVFDNDGKPRVDILKAHLMKEGRLEENV 963
MSEPKAIDPKLSTTDRVVKAVPFPPSHRLTAKEVFDNDGKPRVDILKAHLMKEGRLEENV
Sbjct: 1 MSEPKAIDPKLSTTDRVVKAVPFPPSHRLTAKEVFDNDGKPRVDILKAHLMKEGRLEENV 60
Query: 964 ALRIITEGASILRQEKNLLDIDAPVTVCGDIHGQFFDLMKLFEVGGSPANTRYLFLGDYV 1143
ALRIITEGASILRQEKNLLDIDAPVTVCGDIHGQFFDLMKLFEVGGSPANTRYLFLGDYV
Sbjct: 61 ALRIITEGASILRQEKNLLDIDAPVTVCGDIHGQFFDLMKLFEVGGSPANTRYLFLGDYV 120
Query: 1144 DRGYFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEYFTFKQECKIKYSEHVYDACMD 1323
DRGYFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEYFTFKQECKIKYSEHVYDACMD
Sbjct: 121 DRGYFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEYFTFKQECKIKYSEHVYDACMD 180
Query: 1324 AFDCLPLAALMNQQFLCVHGGLSPEINTLDDIRKLDRFKEPPAYGPMCDILWSDPLEDFG 1503
AFDCLPLAALMNQQFLCVHGGLSPEINTLDDIRKLDRFKEPPAYGPMCDILWSDPLEDFG
Sbjct: 181 AFDCLPLAALMNQQFLCVHGGLSPEINTLDDIRKLDRFKEPPAYGPMCDILWSDPLEDFG 240
Query: 1504 NEKTQEHFTHNTVRGCSYFYSYPAVCEFLQHNNLLSILRAHEAQDAGYRMYRKS*T 1671
NEKTQEHFTHNTVRGCSYFYSYPAVCEFLQHNNLLSILRAHEAQDAGYRMYRKS T
Sbjct: 241 NEKTQEHFTHNTVRGCSYFYSYPAVCEFLQHNNLLSILRAHEAQDAGYRMYRKSQT 296
Score = 35.0 bits (79), Expect(2) = e-180
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +3
Query: 1671 TGFPSLITIFSAPNY 1715
TGFPSLITIFSAPNY
Sbjct: 297 TGFPSLITIFSAPNY 311
>ref|XP_001928050.2| PREDICTED: serine/threonine-protein phosphatase 2B catalytic subunit
beta isoform isoform 1 [Sus scrofa].
Length = 525
Score = 527 bits (1358), Expect(2) = e-153
Identities = 244/293 (83%), Positives = 272/293 (92%)
Frame = +1
Query: 793 PKAIDPKLSTTDRVVKAVPFPPSHRLTAKEVFDNDGKPRVDILKAHLMKEGRLEENVALR 972
P P DRVVKAVPFPP+HRLT++EVFD DG PRVD+LK HL+KEGR++E +ALR
Sbjct: 13 PPPPPPPPPGADRVVKAVPFPPTHRLTSEEVFDMDGIPRVDVLKNHLVKEGRVDEEIALR 72
Query: 973 IITEGASILRQEKNLLDIDAPVTVCGDIHGQFFDLMKLFEVGGSPANTRYLFLGDYVDRG 1152
II EGA+ILR+EK +++++AP+TVCGDIHGQFFDLMKLFEVGGSPANTRYLFLGDYVDRG
Sbjct: 73 IINEGAAILRREKTMIEVEAPITVCGDIHGQFFDLMKLFEVGGSPANTRYLFLGDYVDRG 132
Query: 1153 YFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEYFTFKQECKIKYSEHVYDACMDAFD 1332
YFSIECVLYLW LKILYP TLFLLRGNHECRHLTEYFTFKQECKIKYSE VY+ACM+AFD
Sbjct: 133 YFSIECVLYLWVLKILYPSTLFLLRGNHECRHLTEYFTFKQECKIKYSERVYEACMEAFD 192
Query: 1333 CLPLAALMNQQFLCVHGGLSPEINTLDDIRKLDRFKEPPAYGPMCDILWSDPLEDFGNEK 1512
LPLAAL+NQQFLCVHGGLSPEI+TLDDIR+LDRFKEPPA+GPMCD+LWSDP EDFGNEK
Sbjct: 193 SLPLAALLNQQFLCVHGGLSPEIHTLDDIRRLDRFKEPPAFGPMCDLLWSDPSEDFGNEK 252
Query: 1513 TQEHFTHNTVRGCSYFYSYPAVCEFLQHNNLLSILRAHEAQDAGYRMYRKS*T 1671
+QEHF+HNTVRGCSYFY+YPAVCEFLQ+NNLLSI+RAHEAQDAGYRMYRKS T
Sbjct: 253 SQEHFSHNTVRGCSYFYNYPAVCEFLQNNNLLSIIRAHEAQDAGYRMYRKSQT 305
Score = 35.0 bits (79), Expect(2) = e-153
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +3
Query: 1671 TGFPSLITIFSAPNY 1715
TGFPSLITIFSAPNY
Sbjct: 306 TGFPSLITIFSAPNY 320
>ref|XP_001928060.1| PREDICTED: serine/threonine-protein phosphatase 2B catalytic subunit
beta isoform isoform 2 [Sus scrofa].
Length = 515
Score = 527 bits (1358), Expect(2) = e-153
Identities = 244/293 (83%), Positives = 272/293 (92%)
Frame = +1
Query: 793 PKAIDPKLSTTDRVVKAVPFPPSHRLTAKEVFDNDGKPRVDILKAHLMKEGRLEENVALR 972
P P DRVVKAVPFPP+HRLT++EVFD DG PRVD+LK HL+KEGR++E +ALR
Sbjct: 13 PPPPPPPPPGADRVVKAVPFPPTHRLTSEEVFDMDGIPRVDVLKNHLVKEGRVDEEIALR 72
Query: 973 IITEGASILRQEKNLLDIDAPVTVCGDIHGQFFDLMKLFEVGGSPANTRYLFLGDYVDRG 1152
II EGA+ILR+EK +++++AP+TVCGDIHGQFFDLMKLFEVGGSPANTRYLFLGDYVDRG
Sbjct: 73 IINEGAAILRREKTMIEVEAPITVCGDIHGQFFDLMKLFEVGGSPANTRYLFLGDYVDRG 132
Query: 1153 YFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEYFTFKQECKIKYSEHVYDACMDAFD 1332
YFSIECVLYLW LKILYP TLFLLRGNHECRHLTEYFTFKQECKIKYSE VY+ACM+AFD
Sbjct: 133 YFSIECVLYLWVLKILYPSTLFLLRGNHECRHLTEYFTFKQECKIKYSERVYEACMEAFD 192
Query: 1333 CLPLAALMNQQFLCVHGGLSPEINTLDDIRKLDRFKEPPAYGPMCDILWSDPLEDFGNEK 1512
LPLAAL+NQQFLCVHGGLSPEI+TLDDIR+LDRFKEPPA+GPMCD+LWSDP EDFGNEK
Sbjct: 193 SLPLAALLNQQFLCVHGGLSPEIHTLDDIRRLDRFKEPPAFGPMCDLLWSDPSEDFGNEK 252
Query: 1513 TQEHFTHNTVRGCSYFYSYPAVCEFLQHNNLLSILRAHEAQDAGYRMYRKS*T 1671
+QEHF+HNTVRGCSYFY+YPAVCEFLQ+NNLLSI+RAHEAQDAGYRMYRKS T
Sbjct: 253 SQEHFSHNTVRGCSYFYNYPAVCEFLQNNNLLSIIRAHEAQDAGYRMYRKSQT 305
Score = 35.0 bits (79), Expect(2) = e-153
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +3
Query: 1671 TGFPSLITIFSAPNY 1715
TGFPSLITIFSAPNY
Sbjct: 306 TGFPSLITIFSAPNY 320
>ref|XP_001928198.3| PREDICTED: serine/threonine-protein phosphatase 2B catalytic subunit
gamma isoform [Sus scrofa].
Length = 325
Score = 524 bits (1349), Expect(2) = e-152
Identities = 241/286 (84%), Positives = 271/286 (94%)
Frame = +1
Query: 814 LSTTDRVVKAVPFPPSHRLTAKEVFDNDGKPRVDILKAHLMKEGRLEENVALRIITEGAS 993
LSTT+RV+KAVPFPP+ RLT KEVF+N GKP++D+LK HL+KEGRLEE VAL+II +GA+
Sbjct: 8 LSTTERVIKAVPFPPTQRLTLKEVFEN-GKPKIDVLKNHLVKEGRLEEEVALKIINDGAA 66
Query: 994 ILRQEKNLLDIDAPVTVCGDIHGQFFDLMKLFEVGGSPANTRYLFLGDYVDRGYFSIECV 1173
ILRQEK ++++DAP+TVCGDIHGQFFDLMKLFEVGGSP+NTRYLFLGDYVDRGYFSIECV
Sbjct: 67 ILRQEKTMIEVDAPITVCGDIHGQFFDLMKLFEVGGSPSNTRYLFLGDYVDRGYFSIECV 126
Query: 1174 LYLWALKILYPKTLFLLRGNHECRHLTEYFTFKQECKIKYSEHVYDACMDAFDCLPLAAL 1353
L+LW+LKI +PKTLFLLRGNHECRHLTEYFTFKQEC+IKYSE VYDACMD FDCLPLAAL
Sbjct: 127 LFLWSLKINHPKTLFLLRGNHECRHLTEYFTFKQECRIKYSEQVYDACMDTFDCLPLAAL 186
Query: 1354 MNQQFLCVHGGLSPEINTLDDIRKLDRFKEPPAYGPMCDILWSDPLEDFGNEKTQEHFTH 1533
+NQQFLCVHGG+SPEI LDDIRKLDRFKEPPA+GP+CD+LWSDP ED+GNEKT EH+TH
Sbjct: 187 LNQQFLCVHGGMSPEITCLDDIRKLDRFKEPPAFGPVCDLLWSDPSEDYGNEKTLEHYTH 246
Query: 1534 NTVRGCSYFYSYPAVCEFLQHNNLLSILRAHEAQDAGYRMYRKS*T 1671
NTVRGCSYFYSYPAVCEFLQ+NNLLSI+RAHEAQDAGYRMYRKS T
Sbjct: 247 NTVRGCSYFYSYPAVCEFLQNNNLLSIIRAHEAQDAGYRMYRKSQT 292
Score = 35.0 bits (79), Expect(2) = e-152
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +3
Query: 1671 TGFPSLITIFSAPNY 1715
TGFPSLITIFSAPNY
Sbjct: 293 TGFPSLITIFSAPNY 307
>ref|XP_003357111.1| PREDICTED: hypothetical protein LOC100627938 [Sus scrofa].
Length = 407
Score = 275 bits (704), Expect = 4e-74
Identities = 127/128 (99%), Positives = 128/128 (100%)
Frame = +1
Query: 1042 VCGDIHGQFFDLMKLFEVGGSPANTRYLFLGDYVDRGYFSIECVLYLWALKILYPKTLFL 1221
+CGDIHGQFFDLMKLFEVGGSPANTRYLFLGDYVDRGYFSIECVLYLWALKILYPKTLFL
Sbjct: 189 ICGDIHGQFFDLMKLFEVGGSPANTRYLFLGDYVDRGYFSIECVLYLWALKILYPKTLFL 248
Query: 1222 LRGNHECRHLTEYFTFKQECKIKYSEHVYDACMDAFDCLPLAALMNQQFLCVHGGLSPEI 1401
LRGNHECRHLTEYFTFKQECKIKYSEHVYDACMDAFDCLPLAALMNQQFLCVHGGLSPEI
Sbjct: 249 LRGNHECRHLTEYFTFKQECKIKYSEHVYDACMDAFDCLPLAALMNQQFLCVHGGLSPEI 308
Query: 1402 NTLDDIRK 1425
NTLDDIRK
Sbjct: 309 NTLDDIRK 316
>ref|XP_003133430.1| PREDICTED: serine/threonine-protein phosphatase 2A catalytic subunit
alpha isoform [Sus scrofa].
Length = 287
Score = 209 bits (533), Expect(2) = 1e-54
Identities = 108/234 (46%), Positives = 144/234 (61%), Gaps = 1/234 (0%)
Frame = +1
Query: 949 LEENVALRIITEGASILRQEKNLLDIDAPVTVCGDIHGQFFDLMKLFEVGGSPANTRYLF 1128
+ ++ L + IL +E N+ ++ PVTVCGD+HGQF DLM+LF +GG +T YLF
Sbjct: 1 MRTSLLLSFMLHAKEILTKESNVQEVRCPVTVCGDVHGQFHDLMELFRIGGKSPDTNYLF 60
Query: 1129 LGDYVDRGYFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEYFTFKQECKIKY-SEHV 1305
+GDYVDRGY+S+E V L ALK+ YP+ + +LRGNHE R +T+ + F EC KY + +V
Sbjct: 61 MGDYVDRGYYSVETVTLLVALKVRYPERITILRGNHESRQITQVYGFYDECLRKYGNANV 120
Query: 1306 YDACMDAFDCLPLAALMNQQFLCVHGGLSPEINTLDDIRKLDRFKEPPAYGPMCDILWSD 1485
+ D FD LPL AL++ Q C+HGGLSP I+TLD IR LDR +E P GPMCD+LWSD
Sbjct: 121 WKYFTDLFDYLPLTALVDGQIFCLHGGLSPSIDTLDHIRALDRLQEVPHEGPMCDLLWSD 180
Query: 1486 PLEDFGNEKTQEHFTHNTVRGCSYFYSYPAVCEFLQHNNLLSILRAHEAQDAGY 1647
P +D G + RG Y + F N L + RAH+ GY
Sbjct: 181 P-DDRGGWGI-------SPRGAGYTFGQDISETFNHANGLTLVSRAHQLVMEGY 226
Score = 23.1 bits (48), Expect(2) = 1e-54
Identities = 8/11 (72%), Positives = 11/11 (100%)
Frame = +3
Query: 1683 SLITIFSAPNY 1715
+++TIFSAPNY
Sbjct: 233 NVVTIFSAPNY 243
>ref|NP_999531.1| serine/threonine-protein phosphatase 2A catalytic subunit alpha
isoform [Sus scrofa].
Length = 309
Score = 207 bits (526), Expect(2) = 7e-54
Identities = 108/235 (45%), Positives = 144/235 (61%), Gaps = 1/235 (0%)
Frame = +1
Query: 946 RLEENVALRIITEGASILRQEKNLLDIDAPVTVCGDIHGQFFDLMKLFEVGGSPANTRYL 1125
+L E+ + + IL +E N+ ++ PVTVCGD+HGQF DLM+LF +GG +T YL
Sbjct: 22 QLSESQVKSLCEKAKEILTKESNVQEVRCPVTVCGDVHGQFHDLMELFRIGGKSPDTNYL 81
Query: 1126 FLGDYVDRGYFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEYFTFKQECKIKY-SEH 1302
F+GDYVDRGY+S+E V L ALK+ Y + + +LRGNHE R +T+ + F EC KY + +
Sbjct: 82 FMGDYVDRGYYSVETVTLLVALKVRYRERITILRGNHESRQITQVYGFYDECLRKYGNAN 141
Query: 1303 VYDACMDAFDCLPLAALMNQQFLCVHGGLSPEINTLDDIRKLDRFKEPPAYGPMCDILWS 1482
V+ D FD LPL AL++ Q C+HGGLSP I+TLD IR LDR +E P GPMCD+LWS
Sbjct: 142 VWKYFTDLFDYLPLTALVDGQIFCLHGGLSPSIDTLDHIRALDRLQEVPHEGPMCDLLWS 201
Query: 1483 DPLEDFGNEKTQEHFTHNTVRGCSYFYSYPAVCEFLQHNNLLSILRAHEAQDAGY 1647
DP +D G + RG Y + F N L + RAH+ GY
Sbjct: 202 DP-DDRGGWGI-------SPRGAGYTFGQDISETFNHANGLTLVSRAHQLVMEGY 248
Score = 23.1 bits (48), Expect(2) = 7e-54
Identities = 8/11 (72%), Positives = 11/11 (100%)
Frame = +3
Query: 1683 SLITIFSAPNY 1715
+++TIFSAPNY
Sbjct: 255 NVVTIFSAPNY 265
>ref|NP_001038024.1| protein phosphatase 1 catalytic subunit alpha isoform [Sus scrofa].
Length = 330
Score = 206 bits (523), Expect(2) = 2e-53
Identities = 99/242 (40%), Positives = 150/242 (61%)
Frame = +1
Query: 937 KEGRLEENVALRIITEGASILRQEKNLLDIDAPVTVCGDIHGQFFDLMKLFEVGGSPANT 1116
K +L EN + + I + LL+++AP+ +CGDIHGQ++DL++LFE GG P +
Sbjct: 26 KNVQLTENEIRGLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPES 85
Query: 1117 RYLFLGDYVDRGYFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEYFTFKQECKIKYS 1296
YLFLGDYVDRG S+E + L A KI YP+ FLLRGNHEC + + F ECK +Y+
Sbjct: 86 NYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYN 145
Query: 1297 EHVYDACMDAFDCLPLAALMNQQFLCVHGGLSPEINTLDDIRKLDRFKEPPAYGPMCDIL 1476
++ D F+CLP+AA+++++ C HGGLSP++ +++ IR++ R + P G +CD+L
Sbjct: 146 IKLWKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLL 205
Query: 1477 WSDPLEDFGNEKTQEHFTHNTVRGCSYFYSYPAVCEFLQHNNLLSILRAHEAQDAGYRMY 1656
WSDP +K + + N RG S+ + V +FL ++L I RAH+ + GY +
Sbjct: 206 WSDP------DKDVQGWGEND-RGVSFTFGAEVVAKFLHKHDLDLICRAHQVVEDGYEFF 258
Query: 1657 RK 1662
K
Sbjct: 259 AK 260
Score = 23.1 bits (48), Expect(2) = 2e-53
Identities = 8/10 (80%), Positives = 10/10 (100%)
Frame = +3
Query: 1686 LITIFSAPNY 1715
L+T+FSAPNY
Sbjct: 263 LVTLFSAPNY 272
>ref|NP_001038025.1| protein phosphatase 1 catalytic subunit gamma isoform [Sus scrofa].
Length = 323
Score = 206 bits (523), Expect(2) = 2e-53
Identities = 98/242 (40%), Positives = 149/242 (61%)
Frame = +1
Query: 937 KEGRLEENVALRIITEGASILRQEKNLLDIDAPVTVCGDIHGQFFDLMKLFEVGGSPANT 1116
K +L+EN + + I + LL+++AP+ +CGDIHGQ++DL++LFE GG P +
Sbjct: 26 KNVQLQENEIRGLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPES 85
Query: 1117 RYLFLGDYVDRGYFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEYFTFKQECKIKYS 1296
YLFLGDYVDRG S+E + L A KI YP+ FLLRGNHEC + + F ECK +Y+
Sbjct: 86 NYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYN 145
Query: 1297 EHVYDACMDAFDCLPLAALMNQQFLCVHGGLSPEINTLDDIRKLDRFKEPPAYGPMCDIL 1476
++ D F+CLP+AA+++++ C HGGLSP++ +++ IR++ R + P G +CD+L
Sbjct: 146 IKLWKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLL 205
Query: 1477 WSDPLEDFGNEKTQEHFTHNTVRGCSYFYSYPAVCEFLQHNNLLSILRAHEAQDAGYRMY 1656
WSDP +D + RG S+ + V +FL ++L I RAH+ + GY +
Sbjct: 206 WSDPDKDVLGWGEND-------RGVSFTFGAEVVAKFLHKHDLDLICRAHQVVEDGYEFF 258
Query: 1657 RK 1662
K
Sbjct: 259 AK 260
Score = 23.1 bits (48), Expect(2) = 2e-53
Identities = 8/10 (80%), Positives = 10/10 (100%)
Frame = +3
Query: 1686 LITIFSAPNY 1715
L+T+FSAPNY
Sbjct: 263 LVTLFSAPNY 272
>ref|XP_001929230.1| PREDICTED: serine/threonine-protein phosphatase 6 catalytic subunit
isoform 1 [Sus scrofa].
Length = 305
Score = 205 bits (522), Expect = 6e-53
Identities = 105/235 (44%), Positives = 143/235 (60%), Gaps = 1/235 (0%)
Frame = +1
Query: 949 LEENVALRIITEGASILRQEKNLLDIDAPVTVCGDIHGQFFDLMKLFEVGGSPANTRYLF 1128
L EN R+ +L +E N+ + PVTVCGDIHGQF+DL +LF GG +T Y+F
Sbjct: 19 LPENDLKRLCDYVCDLLLEESNVQPVSTPVTVCGDIHGQFYDLCELFRTGGQVPDTNYIF 78
Query: 1129 LGDYVDRGYFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEYFTFKQECKIKY-SEHV 1305
+GD+VDRGY+S+E YL ALK +P + LLRGNHE R +T+ + F EC+ KY + +
Sbjct: 79 MGDFVDRGYYSLETFTYLLALKAKWPDRITLLRGNHESRQITQVYGFYDECQTKYGNANA 138
Query: 1306 YDACMDAFDCLPLAALMNQQFLCVHGGLSPEINTLDDIRKLDRFKEPPAYGPMCDILWSD 1485
+ C FD L +AAL+++Q LCVHGGLSP+I TLD IR ++R +E P G CD++WSD
Sbjct: 139 WRYCTKVFDMLTVAALIDEQILCVHGGLSPDIKTLDQIRTIERNQEIPHKGAFCDLVWSD 198
Query: 1486 PLEDFGNEKTQEHFTHNTVRGCSYFYSYPAVCEFLQHNNLLSILRAHEAQDAGYR 1650
P ED + RG + + EF+ NNL I RAH+ GY+
Sbjct: 199 P-EDVDTWAI-------SPRGAGWLFGAKVTNEFVHINNLKLICRAHQLVHEGYK 245
Database: RefSeq49_SP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 11,343,932
Number of sequences in database: 24,897
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 24897
Number of Hits to DB: 38,480,326
Number of extensions: 1113879
Number of successful extensions: 3811
Number of sequences better than 1.0e-05: 17
Number of HSP's gapped: 3760
Number of HSP's successfully gapped: 29
Length of query: 571
Length of database: 11,343,932
Length adjustment: 104
Effective length of query: 467
Effective length of database: 8,754,644
Effective search space: 4088418748
Effective search space used: 4088418748
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to RefSeqMP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-013432
(1715 letters)
Database: RefSeq49_MP.fasta
30,036 sequences; 15,617,559 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_032939.1| serine/threonine-protein phosphatase 2B catalyt... 609 e-178
Alignment gi|NP_032940.1| serine/threonine-protein phosphatase 2B catalyt... 528 e-153
Alignment gi|NP_032941.1| serine/threonine-protein phosphatase 2B catalyt... 510 e-148
Alignment gi|NP_059070.1| serine/threonine-protein phosphatase 2A catalyt... 212 3e-55
Alignment gi|NP_062648.1| serine/threonine-protein phosphatase 4 catalyti... 209 4e-54
Alignment gi|NP_062284.1| serine/threonine-protein phosphatase 2A catalyt... 207 1e-53
Alignment gi|NP_114074.1| serine/threonine-protein phosphatase PP1-alpha ... 206 2e-53
Alignment gi|NP_038664.2| serine/threonine-protein phosphatase PP1-gamma ... 206 2e-53
Alignment gi|NP_077171.1| serine/threonine-protein phosphatase 6 catalyti... 205 8e-53
Alignment gi|NP_766295.2| serine/threonine-protein phosphatase PP1-beta c... 199 2e-51
>ref|NP_032939.1| serine/threonine-protein phosphatase 2B catalytic subunit alpha
isoform [Mus musculus].
Length = 521
Score = 609 bits (1571), Expect(2) = e-178
Identities = 292/296 (98%), Positives = 294/296 (99%)
Frame = +1
Query: 784 MSEPKAIDPKLSTTDRVVKAVPFPPSHRLTAKEVFDNDGKPRVDILKAHLMKEGRLEENV 963
MSEPKAIDPKLSTTDRVVKAVPFPPSHRLTAKEVFDNDGKPRVDILKAHLMKEGRLEE+V
Sbjct: 1 MSEPKAIDPKLSTTDRVVKAVPFPPSHRLTAKEVFDNDGKPRVDILKAHLMKEGRLEESV 60
Query: 964 ALRIITEGASILRQEKNLLDIDAPVTVCGDIHGQFFDLMKLFEVGGSPANTRYLFLGDYV 1143
ALRIITEGASILRQEKNLLDIDAPVTVCGDIHGQFFDLMKLFEVGGSPANTRYLFLGDYV
Sbjct: 61 ALRIITEGASILRQEKNLLDIDAPVTVCGDIHGQFFDLMKLFEVGGSPANTRYLFLGDYV 120
Query: 1144 DRGYFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEYFTFKQECKIKYSEHVYDACMD 1323
DRGYFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEYFTFKQECKIKYSE VYDACMD
Sbjct: 121 DRGYFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEYFTFKQECKIKYSERVYDACMD 180
Query: 1324 AFDCLPLAALMNQQFLCVHGGLSPEINTLDDIRKLDRFKEPPAYGPMCDILWSDPLEDFG 1503
AFDCLPLAALMNQQFLCVHGGLSPEINTLDDIRKLDRFKEPPAYGPMCDILWSDPLEDFG
Sbjct: 181 AFDCLPLAALMNQQFLCVHGGLSPEINTLDDIRKLDRFKEPPAYGPMCDILWSDPLEDFG 240
Query: 1504 NEKTQEHFTHNTVRGCSYFYSYPAVCEFLQHNNLLSILRAHEAQDAGYRMYRKS*T 1671
NEKTQEHFTHNTVRGCSYFYSYPAVC+FLQHNNLLSILRAHEAQDAGYRMYRKS T
Sbjct: 241 NEKTQEHFTHNTVRGCSYFYSYPAVCDFLQHNNLLSILRAHEAQDAGYRMYRKSQT 296
Score = 35.0 bits (79), Expect(2) = e-178
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +3
Query: 1671 TGFPSLITIFSAPNY 1715
TGFPSLITIFSAPNY
Sbjct: 297 TGFPSLITIFSAPNY 311
>ref|NP_032940.1| serine/threonine-protein phosphatase 2B catalytic subunit beta
isoform [Mus musculus].
Length = 525
Score = 528 bits (1361), Expect(2) = e-153
Identities = 247/301 (82%), Positives = 275/301 (91%)
Frame = +1
Query: 769 PRRLEMSEPKAIDPKLSTTDRVVKAVPFPPSHRLTAKEVFDNDGKPRVDILKAHLMKEGR 948
P R P P L DRVVKAVPFPP+HRLT++EVFD DG PRVD+LK HL+KEGR
Sbjct: 6 PARAAPPPPPPPPPPLGA-DRVVKAVPFPPTHRLTSEEVFDMDGIPRVDVLKNHLVKEGR 64
Query: 949 LEENVALRIITEGASILRQEKNLLDIDAPVTVCGDIHGQFFDLMKLFEVGGSPANTRYLF 1128
++E +ALRII EGA+ILR+EK +++++AP+TVCGDIHGQFFDLMKLFEVGGSPANTRYLF
Sbjct: 65 VDEEIALRIINEGAAILRREKTMIEVEAPITVCGDIHGQFFDLMKLFEVGGSPANTRYLF 124
Query: 1129 LGDYVDRGYFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEYFTFKQECKIKYSEHVY 1308
LGDYVDRGYFSIECVLYLW LKILYP TLFLLRGNHECRHLTEYFTFKQECKIKYSE VY
Sbjct: 125 LGDYVDRGYFSIECVLYLWVLKILYPSTLFLLRGNHECRHLTEYFTFKQECKIKYSERVY 184
Query: 1309 DACMDAFDCLPLAALMNQQFLCVHGGLSPEINTLDDIRKLDRFKEPPAYGPMCDILWSDP 1488
+ACM+AFD LPLAAL+NQQFLCVHGGLSPEI+TLDDIR+LDRFKEPPA+GPMCD+LWSDP
Sbjct: 185 EACMEAFDSLPLAALLNQQFLCVHGGLSPEIHTLDDIRRLDRFKEPPAFGPMCDLLWSDP 244
Query: 1489 LEDFGNEKTQEHFTHNTVRGCSYFYSYPAVCEFLQHNNLLSILRAHEAQDAGYRMYRKS* 1668
EDFGNEK+QEHF+HNTVRGCSYFY+YPAVCEFLQ+NNLLSI+RAHEAQDAGYRMYRKS
Sbjct: 245 SEDFGNEKSQEHFSHNTVRGCSYFYNYPAVCEFLQNNNLLSIIRAHEAQDAGYRMYRKSQ 304
Query: 1669 T 1671
T
Sbjct: 305 T 305
Score = 35.0 bits (79), Expect(2) = e-153
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +3
Query: 1671 TGFPSLITIFSAPNY 1715
TGFPSLITIFSAPNY
Sbjct: 306 TGFPSLITIFSAPNY 320
>ref|NP_032941.1| serine/threonine-protein phosphatase 2B catalytic subunit gamma
isoform [Mus musculus].
Length = 513
Score = 510 bits (1313), Expect(2) = e-148
Identities = 231/286 (80%), Positives = 270/286 (94%)
Frame = +1
Query: 808 PKLSTTDRVVKAVPFPPSHRLTAKEVFDNDGKPRVDILKAHLMKEGRLEENVALRIITEG 987
P+ STT+RV+KAVPFPP+ RLT KEVF+N GKP++D+LK HL+KEGR+EE VAL+II +G
Sbjct: 6 PQFSTTERVIKAVPFPPTRRLTLKEVFEN-GKPKMDLLKNHLVKEGRVEEEVALKIINDG 64
Query: 988 ASILRQEKNLLDIDAPVTVCGDIHGQFFDLMKLFEVGGSPANTRYLFLGDYVDRGYFSIE 1167
A+IL+QEK +++++AP+TVCGD+HGQFFDLMKLFEVGGSP+NTRYLFLGDYVDRGYFSIE
Sbjct: 65 AAILKQEKTMIEVEAPITVCGDVHGQFFDLMKLFEVGGSPSNTRYLFLGDYVDRGYFSIE 124
Query: 1168 CVLYLWALKILYPKTLFLLRGNHECRHLTEYFTFKQECKIKYSEHVYDACMDAFDCLPLA 1347
CVLYLW+LKI +PKTLFLLRGNHECRHLTEYFTFKQEC+IKYSE VYDACM FDCLPLA
Sbjct: 125 CVLYLWSLKINHPKTLFLLRGNHECRHLTEYFTFKQECRIKYSEMVYDACMHTFDCLPLA 184
Query: 1348 ALMNQQFLCVHGGLSPEINTLDDIRKLDRFKEPPAYGPMCDILWSDPLEDFGNEKTQEHF 1527
AL+NQQFLCVHGG+SPEI L+DIRKLDRF EPPA+GP+CD+LWSDPLED+G+EKT EH+
Sbjct: 185 ALLNQQFLCVHGGMSPEITCLEDIRKLDRFSEPPAFGPVCDLLWSDPLEDYGSEKTLEHY 244
Query: 1528 THNTVRGCSYFYSYPAVCEFLQHNNLLSILRAHEAQDAGYRMYRKS 1665
THNTVRGCSYF+SYPAVCEFLQ+N+LLSI+RAHEAQDAGYRMYRK+
Sbjct: 245 THNTVRGCSYFFSYPAVCEFLQNNSLLSIIRAHEAQDAGYRMYRKN 290
Score = 35.0 bits (79), Expect(2) = e-148
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +3
Query: 1671 TGFPSLITIFSAPNY 1715
TGFPSLITIFSAPNY
Sbjct: 293 TGFPSLITIFSAPNY 307
>ref|NP_059070.1| serine/threonine-protein phosphatase 2A catalytic subunit beta
isoform [Mus musculus].
Length = 309
Score = 212 bits (540), Expect(2) = 3e-55
Identities = 110/235 (46%), Positives = 145/235 (61%), Gaps = 1/235 (0%)
Frame = +1
Query: 946 RLEENVALRIITEGASILRQEKNLLDIDAPVTVCGDIHGQFFDLMKLFEVGGSPANTRYL 1125
+L EN + + IL +E N+ ++ PVTVCGD+HGQF DLM+LF +GG +T YL
Sbjct: 22 QLNENQVRTLCEKAKEILTKESNVQEVRCPVTVCGDVHGQFHDLMELFRIGGKSPDTNYL 81
Query: 1126 FLGDYVDRGYFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEYFTFKQECKIKY-SEH 1302
F+GDYVDRGY+S+E V L ALK+ YP+ + +LRGNHE R +T+ + F EC KY + +
Sbjct: 82 FMGDYVDRGYYSVETVTLLVALKVRYPERITILRGNHESRQITQVYGFYDECLRKYGNAN 141
Query: 1303 VYDACMDAFDCLPLAALMNQQFLCVHGGLSPEINTLDDIRKLDRFKEPPAYGPMCDILWS 1482
V+ D FD LPL AL++ Q C+HGGLSP I+TLD IR LDR +E P GPMCD+LWS
Sbjct: 142 VWKYFTDLFDYLPLTALVDGQIFCLHGGLSPSIDTLDHIRALDRLQEVPHEGPMCDLLWS 201
Query: 1483 DPLEDFGNEKTQEHFTHNTVRGCSYFYSYPAVCEFLQHNNLLSILRAHEAQDAGY 1647
DP +D G + RG Y + F N L + RAH+ GY
Sbjct: 202 DP-DDRGGWGI-------SPRGAGYTFGQDISETFNHANGLTLVSRAHQLVMEGY 248
Score = 23.1 bits (48), Expect(2) = 3e-55
Identities = 8/11 (72%), Positives = 11/11 (100%)
Frame = +3
Query: 1683 SLITIFSAPNY 1715
+++TIFSAPNY
Sbjct: 255 NVVTIFSAPNY 265
>ref|NP_062648.1| serine/threonine-protein phosphatase 4 catalytic subunit [Mus
musculus].
Length = 307
Score = 209 bits (533), Expect = 4e-54
Identities = 106/237 (44%), Positives = 147/237 (62%), Gaps = 1/237 (0%)
Frame = +1
Query: 949 LEENVALRIITEGASILRQEKNLLDIDAPVTVCGDIHGQFFDLMKLFEVGGSPANTRYLF 1128
++E+ + + IL +E N+ +D+PVTVCGDIHGQF+DL +LF VGG T YLF
Sbjct: 20 IKESEVKALCAKAREILVEESNVQRVDSPVTVCGDIHGQFYDLKELFRVGGDVPETNYLF 79
Query: 1129 LGDYVDRGYFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEYFTFKQECKIKY-SEHV 1305
+GD+VDRG++S+E L L ALK+ YP + L+RGNHE R +T+ + F EC KY S V
Sbjct: 80 MGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSVTV 139
Query: 1306 YDACMDAFDCLPLAALMNQQFLCVHGGLSPEINTLDDIRKLDRFKEPPAYGPMCDILWSD 1485
+ C + FD L L+A+++ + CVHGGLSP I TLD IR +DR +E P GPMCD+LWSD
Sbjct: 140 WRYCTEIFDYLSLSAIIDGKIFCVHGGLSPSIQTLDQIRTIDRKQEVPHDGPMCDLLWSD 199
Query: 1486 PLEDFGNEKTQEHFTHNTVRGCSYFYSYPAVCEFLQHNNLLSILRAHEAQDAGYRMY 1656
P + G + RG Y + V +F N++ I RAH+ GY+ +
Sbjct: 200 PEDTTG--------WGVSPRGAGYLFGSDVVAQFNAANDIDMICRAHQLVMEGYKWH 248
>ref|NP_062284.1| serine/threonine-protein phosphatase 2A catalytic subunit alpha
isoform [Mus musculus].
Length = 309
Score = 207 bits (526), Expect(2) = 1e-53
Identities = 108/235 (45%), Positives = 144/235 (61%), Gaps = 1/235 (0%)
Frame = +1
Query: 946 RLEENVALRIITEGASILRQEKNLLDIDAPVTVCGDIHGQFFDLMKLFEVGGSPANTRYL 1125
+L E+ + + IL +E N+ ++ PVTVCGD+HGQF DLM+LF +GG +T YL
Sbjct: 22 QLSESQVKSLCEKAKEILTKESNVQEVRCPVTVCGDVHGQFHDLMELFRIGGKSPDTNYL 81
Query: 1126 FLGDYVDRGYFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEYFTFKQECKIKY-SEH 1302
F+GDYVDRGY+S+E V L ALK+ Y + + +LRGNHE R +T+ + F EC KY + +
Sbjct: 82 FMGDYVDRGYYSVETVTLLVALKVRYRERITILRGNHESRQITQVYGFYDECLRKYGNAN 141
Query: 1303 VYDACMDAFDCLPLAALMNQQFLCVHGGLSPEINTLDDIRKLDRFKEPPAYGPMCDILWS 1482
V+ D FD LPL AL++ Q C+HGGLSP I+TLD IR LDR +E P GPMCD+LWS
Sbjct: 142 VWKYFTDLFDYLPLTALVDGQIFCLHGGLSPSIDTLDHIRALDRLQEVPHEGPMCDLLWS 201
Query: 1483 DPLEDFGNEKTQEHFTHNTVRGCSYFYSYPAVCEFLQHNNLLSILRAHEAQDAGY 1647
DP +D G + RG Y + F N L + RAH+ GY
Sbjct: 202 DP-DDRGGWGI-------SPRGAGYTFGQDISETFNHANGLTLVSRAHQLVMEGY 248
Score = 23.1 bits (48), Expect(2) = 1e-53
Identities = 8/11 (72%), Positives = 11/11 (100%)
Frame = +3
Query: 1683 SLITIFSAPNY 1715
+++TIFSAPNY
Sbjct: 255 NVVTIFSAPNY 265
>ref|NP_114074.1| serine/threonine-protein phosphatase PP1-alpha catalytic subunit [Mus
musculus].
Length = 330
Score = 206 bits (523), Expect(2) = 2e-53
Identities = 99/242 (40%), Positives = 150/242 (61%)
Frame = +1
Query: 937 KEGRLEENVALRIITEGASILRQEKNLLDIDAPVTVCGDIHGQFFDLMKLFEVGGSPANT 1116
K +L EN + + I + LL+++AP+ +CGDIHGQ++DL++LFE GG P +
Sbjct: 26 KNVQLTENEIRGLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPES 85
Query: 1117 RYLFLGDYVDRGYFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEYFTFKQECKIKYS 1296
YLFLGDYVDRG S+E + L A KI YP+ FLLRGNHEC + + F ECK +Y+
Sbjct: 86 NYLFLGDYVDRGKQSLETICLLLAYKIRYPENFFLLRGNHECASINRIYGFYDECKRRYN 145
Query: 1297 EHVYDACMDAFDCLPLAALMNQQFLCVHGGLSPEINTLDDIRKLDRFKEPPAYGPMCDIL 1476
++ D F+CLP+AA+++++ C HGGLSP++ +++ IR++ R + P G +CD+L
Sbjct: 146 IKLWKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLL 205
Query: 1477 WSDPLEDFGNEKTQEHFTHNTVRGCSYFYSYPAVCEFLQHNNLLSILRAHEAQDAGYRMY 1656
WSDP +K + + N RG S+ + V +FL ++L I RAH+ + GY +
Sbjct: 206 WSDP------DKDVQGWGEND-RGVSFTFGAEVVAKFLHKHDLDLICRAHQVVEDGYEFF 258
Query: 1657 RK 1662
K
Sbjct: 259 AK 260
Score = 23.1 bits (48), Expect(2) = 2e-53
Identities = 8/10 (80%), Positives = 10/10 (100%)
Frame = +3
Query: 1686 LITIFSAPNY 1715
L+T+FSAPNY
Sbjct: 263 LVTLFSAPNY 272
>ref|NP_038664.2| serine/threonine-protein phosphatase PP1-gamma catalytic subunit [Mus
musculus].
Length = 323
Score = 206 bits (523), Expect(2) = 2e-53
Identities = 98/242 (40%), Positives = 149/242 (61%)
Frame = +1
Query: 937 KEGRLEENVALRIITEGASILRQEKNLLDIDAPVTVCGDIHGQFFDLMKLFEVGGSPANT 1116
K +L+EN + + I + LL+++AP+ +CGDIHGQ++DL++LFE GG P +
Sbjct: 26 KNVQLQENEIRGLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPES 85
Query: 1117 RYLFLGDYVDRGYFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEYFTFKQECKIKYS 1296
YLFLGDYVDRG S+E + L A KI YP+ FLLRGNHEC + + F ECK +Y+
Sbjct: 86 NYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYN 145
Query: 1297 EHVYDACMDAFDCLPLAALMNQQFLCVHGGLSPEINTLDDIRKLDRFKEPPAYGPMCDIL 1476
++ D F+CLP+AA+++++ C HGGLSP++ +++ IR++ R + P G +CD+L
Sbjct: 146 IKLWKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLL 205
Query: 1477 WSDPLEDFGNEKTQEHFTHNTVRGCSYFYSYPAVCEFLQHNNLLSILRAHEAQDAGYRMY 1656
WSDP +D + RG S+ + V +FL ++L I RAH+ + GY +
Sbjct: 206 WSDPDKDVLGWGEND-------RGVSFTFGAEVVAKFLHKHDLDLICRAHQVVEDGYEFF 258
Query: 1657 RK 1662
K
Sbjct: 259 AK 260
Score = 23.1 bits (48), Expect(2) = 2e-53
Identities = 8/10 (80%), Positives = 10/10 (100%)
Frame = +3
Query: 1686 LITIFSAPNY 1715
L+T+FSAPNY
Sbjct: 263 LVTLFSAPNY 272
>ref|NP_077171.1| serine/threonine-protein phosphatase 6 catalytic subunit [Mus
musculus].
Length = 305
Score = 205 bits (522), Expect = 8e-53
Identities = 105/235 (44%), Positives = 143/235 (60%), Gaps = 1/235 (0%)
Frame = +1
Query: 949 LEENVALRIITEGASILRQEKNLLDIDAPVTVCGDIHGQFFDLMKLFEVGGSPANTRYLF 1128
L EN R+ +L +E N+ + PVTVCGDIHGQF+DL +LF GG +T Y+F
Sbjct: 19 LPENDLKRLCDYVCDLLLEESNVQPVSTPVTVCGDIHGQFYDLCELFRTGGQVPDTNYIF 78
Query: 1129 LGDYVDRGYFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEYFTFKQECKIKY-SEHV 1305
+GD+VDRGY+S+E YL ALK +P + LLRGNHE R +T+ + F EC+ KY + +
Sbjct: 79 MGDFVDRGYYSLETFTYLLALKAKWPDRITLLRGNHESRQITQVYGFYDECQTKYGNANA 138
Query: 1306 YDACMDAFDCLPLAALMNQQFLCVHGGLSPEINTLDDIRKLDRFKEPPAYGPMCDILWSD 1485
+ C FD L +AAL+++Q LCVHGGLSP+I TLD IR ++R +E P G CD++WSD
Sbjct: 139 WRYCTKVFDMLTVAALIDEQILCVHGGLSPDIKTLDQIRTIERNQEIPHKGAFCDLVWSD 198
Query: 1486 PLEDFGNEKTQEHFTHNTVRGCSYFYSYPAVCEFLQHNNLLSILRAHEAQDAGYR 1650
P ED + RG + + EF+ NNL I RAH+ GY+
Sbjct: 199 P-EDVDTWAI-------SPRGAGWLFGAKVTNEFVHINNLKLICRAHQLVHEGYK 245
>ref|NP_766295.2| serine/threonine-protein phosphatase PP1-beta catalytic subunit [Mus
musculus].
Length = 327
Score = 199 bits (506), Expect(2) = 2e-51
Identities = 102/264 (38%), Positives = 155/264 (58%), Gaps = 8/264 (3%)
Frame = +1
Query: 895 DGKPRVDILKAHLM--------KEGRLEENVALRIITEGASILRQEKNLLDIDAPVTVCG 1050
DG+ VD L L+ K ++ E + + I + LL+++AP+ +CG
Sbjct: 3 DGELNVDSLITRLLEVRGCRPGKIVQMTEAEVRGLCIKSREIFLSQPILLELEAPLKICG 62
Query: 1051 DIHGQFFDLMKLFEVGGSPANTRYLFLGDYVDRGYFSIECVLYLWALKILYPKTLFLLRG 1230
DIHGQ+ DL++LFE GG P YLFLGDYVDRG S+E + L A KI YP+ FLLRG
Sbjct: 63 DIHGQYTDLLRLFEYGGFPPEANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRG 122
Query: 1231 NHECRHLTEYFTFKQECKIKYSEHVYDACMDAFDCLPLAALMNQQFLCVHGGLSPEINTL 1410
NHEC + + F ECK +++ ++ D F+CLP+AA+++++ C HGGLSP++ ++
Sbjct: 123 NHECASINRIYGFYDECKRRFNIKLWKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDLQSM 182
Query: 1411 DDIRKLDRFKEPPAYGPMCDILWSDPLEDFGNEKTQEHFTHNTVRGCSYFYSYPAVCEFL 1590
+ IR++ R + P G +CD+LWSDP +K + + N RG S+ + V +FL
Sbjct: 183 EQIRRIMRPTDVPDTGLLCDLLWSDP------DKDVQGWGEND-RGVSFTFGADVVSKFL 235
Query: 1591 QHNNLLSILRAHEAQDAGYRMYRK 1662
++L I RAH+ + GY + K
Sbjct: 236 NRHDLDLICRAHQVVEDGYEFFAK 259
Score = 23.1 bits (48), Expect(2) = 2e-51
Identities = 8/10 (80%), Positives = 10/10 (100%)
Frame = +3
Query: 1686 LITIFSAPNY 1715
L+T+FSAPNY
Sbjct: 262 LVTLFSAPNY 271
Database: RefSeq49_MP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 15,617,559
Number of sequences in database: 30,036
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 30036
Number of Hits to DB: 50,912,538
Number of extensions: 1334766
Number of successful extensions: 4962
Number of sequences better than 1.0e-05: 13
Number of HSP's gapped: 4902
Number of HSP's successfully gapped: 23
Length of query: 571
Length of database: 15,617,559
Length adjustment: 107
Effective length of query: 464
Effective length of database: 12,403,707
Effective search space: 5755320048
Effective search space used: 5755320048
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to RefSeqHP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-013432
(1715 letters)
Database: RefSeq49_HP.fasta
32,964 sequences; 18,297,164 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_000935.1| serine/threonine-protein phosphatase 2B catalyt... 610 e-178
Alignment gi|NP_001124163.1| serine/threonine-protein phosphatase 2B cata... 610 e-178
Alignment gi|NP_001124164.1| serine/threonine-protein phosphatase 2B cata... 610 e-178
Alignment gi|NP_001135825.1| serine/threonine-protein phosphatase 2B cata... 527 e-153
Alignment gi|NP_066955.1| serine/threonine-protein phosphatase 2B catalyt... 527 e-153
Alignment gi|NP_001135826.1| serine/threonine-protein phosphatase 2B cata... 527 e-153
Alignment gi|NP_005596.2| serine/threonine-protein phosphatase 2B catalyt... 522 e-152
Alignment gi|NP_001009552.1| serine/threonine-protein phosphatase 2A cata... 212 3e-55
Alignment gi|NP_002711.1| serine/threonine-protein phosphatase 4 catalyti... 209 5e-54
Alignment gi|NP_002706.1| serine/threonine-protein phosphatase 2A catalyt... 207 1e-53
>ref|NP_000935.1| serine/threonine-protein phosphatase 2B catalytic subunit alpha
isoform isoform 1 [Homo sapiens].
Length = 521
Score = 610 bits (1574), Expect(2) = e-178
Identities = 293/296 (98%), Positives = 294/296 (99%)
Frame = +1
Query: 784 MSEPKAIDPKLSTTDRVVKAVPFPPSHRLTAKEVFDNDGKPRVDILKAHLMKEGRLEENV 963
MSEPKAIDPKLSTTDRVVKAVPFPPSHRLTAKEVFDNDGKPRVDILKAHLMKEGRLEE+V
Sbjct: 1 MSEPKAIDPKLSTTDRVVKAVPFPPSHRLTAKEVFDNDGKPRVDILKAHLMKEGRLEESV 60
Query: 964 ALRIITEGASILRQEKNLLDIDAPVTVCGDIHGQFFDLMKLFEVGGSPANTRYLFLGDYV 1143
ALRIITEGASILRQEKNLLDIDAPVTVCGDIHGQFFDLMKLFEVGGSPANTRYLFLGDYV
Sbjct: 61 ALRIITEGASILRQEKNLLDIDAPVTVCGDIHGQFFDLMKLFEVGGSPANTRYLFLGDYV 120
Query: 1144 DRGYFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEYFTFKQECKIKYSEHVYDACMD 1323
DRGYFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEYFTFKQECKIKYSE VYDACMD
Sbjct: 121 DRGYFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEYFTFKQECKIKYSERVYDACMD 180
Query: 1324 AFDCLPLAALMNQQFLCVHGGLSPEINTLDDIRKLDRFKEPPAYGPMCDILWSDPLEDFG 1503
AFDCLPLAALMNQQFLCVHGGLSPEINTLDDIRKLDRFKEPPAYGPMCDILWSDPLEDFG
Sbjct: 181 AFDCLPLAALMNQQFLCVHGGLSPEINTLDDIRKLDRFKEPPAYGPMCDILWSDPLEDFG 240
Query: 1504 NEKTQEHFTHNTVRGCSYFYSYPAVCEFLQHNNLLSILRAHEAQDAGYRMYRKS*T 1671
NEKTQEHFTHNTVRGCSYFYSYPAVCEFLQHNNLLSILRAHEAQDAGYRMYRKS T
Sbjct: 241 NEKTQEHFTHNTVRGCSYFYSYPAVCEFLQHNNLLSILRAHEAQDAGYRMYRKSQT 296
Score = 35.0 bits (79), Expect(2) = e-178
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +3
Query: 1671 TGFPSLITIFSAPNY 1715
TGFPSLITIFSAPNY
Sbjct: 297 TGFPSLITIFSAPNY 311
>ref|NP_001124163.1| serine/threonine-protein phosphatase 2B catalytic subunit alpha
isoform isoform 2 [Homo sapiens].
Length = 511
Score = 610 bits (1574), Expect(2) = e-178
Identities = 293/296 (98%), Positives = 294/296 (99%)
Frame = +1
Query: 784 MSEPKAIDPKLSTTDRVVKAVPFPPSHRLTAKEVFDNDGKPRVDILKAHLMKEGRLEENV 963
MSEPKAIDPKLSTTDRVVKAVPFPPSHRLTAKEVFDNDGKPRVDILKAHLMKEGRLEE+V
Sbjct: 1 MSEPKAIDPKLSTTDRVVKAVPFPPSHRLTAKEVFDNDGKPRVDILKAHLMKEGRLEESV 60
Query: 964 ALRIITEGASILRQEKNLLDIDAPVTVCGDIHGQFFDLMKLFEVGGSPANTRYLFLGDYV 1143
ALRIITEGASILRQEKNLLDIDAPVTVCGDIHGQFFDLMKLFEVGGSPANTRYLFLGDYV
Sbjct: 61 ALRIITEGASILRQEKNLLDIDAPVTVCGDIHGQFFDLMKLFEVGGSPANTRYLFLGDYV 120
Query: 1144 DRGYFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEYFTFKQECKIKYSEHVYDACMD 1323
DRGYFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEYFTFKQECKIKYSE VYDACMD
Sbjct: 121 DRGYFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEYFTFKQECKIKYSERVYDACMD 180
Query: 1324 AFDCLPLAALMNQQFLCVHGGLSPEINTLDDIRKLDRFKEPPAYGPMCDILWSDPLEDFG 1503
AFDCLPLAALMNQQFLCVHGGLSPEINTLDDIRKLDRFKEPPAYGPMCDILWSDPLEDFG
Sbjct: 181 AFDCLPLAALMNQQFLCVHGGLSPEINTLDDIRKLDRFKEPPAYGPMCDILWSDPLEDFG 240
Query: 1504 NEKTQEHFTHNTVRGCSYFYSYPAVCEFLQHNNLLSILRAHEAQDAGYRMYRKS*T 1671
NEKTQEHFTHNTVRGCSYFYSYPAVCEFLQHNNLLSILRAHEAQDAGYRMYRKS T
Sbjct: 241 NEKTQEHFTHNTVRGCSYFYSYPAVCEFLQHNNLLSILRAHEAQDAGYRMYRKSQT 296
Score = 35.0 bits (79), Expect(2) = e-178
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +3
Query: 1671 TGFPSLITIFSAPNY 1715
TGFPSLITIFSAPNY
Sbjct: 297 TGFPSLITIFSAPNY 311
>ref|NP_001124164.1| serine/threonine-protein phosphatase 2B catalytic subunit alpha
isoform isoform 3 [Homo sapiens].
Length = 469
Score = 610 bits (1574), Expect(2) = e-178
Identities = 293/296 (98%), Positives = 294/296 (99%)
Frame = +1
Query: 784 MSEPKAIDPKLSTTDRVVKAVPFPPSHRLTAKEVFDNDGKPRVDILKAHLMKEGRLEENV 963
MSEPKAIDPKLSTTDRVVKAVPFPPSHRLTAKEVFDNDGKPRVDILKAHLMKEGRLEE+V
Sbjct: 1 MSEPKAIDPKLSTTDRVVKAVPFPPSHRLTAKEVFDNDGKPRVDILKAHLMKEGRLEESV 60
Query: 964 ALRIITEGASILRQEKNLLDIDAPVTVCGDIHGQFFDLMKLFEVGGSPANTRYLFLGDYV 1143
ALRIITEGASILRQEKNLLDIDAPVTVCGDIHGQFFDLMKLFEVGGSPANTRYLFLGDYV
Sbjct: 61 ALRIITEGASILRQEKNLLDIDAPVTVCGDIHGQFFDLMKLFEVGGSPANTRYLFLGDYV 120
Query: 1144 DRGYFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEYFTFKQECKIKYSEHVYDACMD 1323
DRGYFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEYFTFKQECKIKYSE VYDACMD
Sbjct: 121 DRGYFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEYFTFKQECKIKYSERVYDACMD 180
Query: 1324 AFDCLPLAALMNQQFLCVHGGLSPEINTLDDIRKLDRFKEPPAYGPMCDILWSDPLEDFG 1503
AFDCLPLAALMNQQFLCVHGGLSPEINTLDDIRKLDRFKEPPAYGPMCDILWSDPLEDFG
Sbjct: 181 AFDCLPLAALMNQQFLCVHGGLSPEINTLDDIRKLDRFKEPPAYGPMCDILWSDPLEDFG 240
Query: 1504 NEKTQEHFTHNTVRGCSYFYSYPAVCEFLQHNNLLSILRAHEAQDAGYRMYRKS*T 1671
NEKTQEHFTHNTVRGCSYFYSYPAVCEFLQHNNLLSILRAHEAQDAGYRMYRKS T
Sbjct: 241 NEKTQEHFTHNTVRGCSYFYSYPAVCEFLQHNNLLSILRAHEAQDAGYRMYRKSQT 296
Score = 35.0 bits (79), Expect(2) = e-178
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +3
Query: 1671 TGFPSLITIFSAPNY 1715
TGFPSLITIFSAPNY
Sbjct: 297 TGFPSLITIFSAPNY 311
>ref|NP_001135825.1| serine/threonine-protein phosphatase 2B catalytic subunit beta
isoform isoform a [Homo sapiens].
Length = 525
Score = 527 bits (1357), Expect(2) = e-153
Identities = 244/293 (83%), Positives = 272/293 (92%)
Frame = +1
Query: 793 PKAIDPKLSTTDRVVKAVPFPPSHRLTAKEVFDNDGKPRVDILKAHLMKEGRLEENVALR 972
P P DRVVKAVPFPP+HRLT++EVFD DG PRVD+LK HL+KEGR++E +ALR
Sbjct: 13 PPPPPPPPPGADRVVKAVPFPPTHRLTSEEVFDLDGIPRVDVLKNHLVKEGRVDEEIALR 72
Query: 973 IITEGASILRQEKNLLDIDAPVTVCGDIHGQFFDLMKLFEVGGSPANTRYLFLGDYVDRG 1152
II EGA+ILR+EK +++++AP+TVCGDIHGQFFDLMKLFEVGGSPANTRYLFLGDYVDRG
Sbjct: 73 IINEGAAILRREKTMIEVEAPITVCGDIHGQFFDLMKLFEVGGSPANTRYLFLGDYVDRG 132
Query: 1153 YFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEYFTFKQECKIKYSEHVYDACMDAFD 1332
YFSIECVLYLW LKILYP TLFLLRGNHECRHLTEYFTFKQECKIKYSE VY+ACM+AFD
Sbjct: 133 YFSIECVLYLWVLKILYPSTLFLLRGNHECRHLTEYFTFKQECKIKYSERVYEACMEAFD 192
Query: 1333 CLPLAALMNQQFLCVHGGLSPEINTLDDIRKLDRFKEPPAYGPMCDILWSDPLEDFGNEK 1512
LPLAAL+NQQFLCVHGGLSPEI+TLDDIR+LDRFKEPPA+GPMCD+LWSDP EDFGNEK
Sbjct: 193 SLPLAALLNQQFLCVHGGLSPEIHTLDDIRRLDRFKEPPAFGPMCDLLWSDPSEDFGNEK 252
Query: 1513 TQEHFTHNTVRGCSYFYSYPAVCEFLQHNNLLSILRAHEAQDAGYRMYRKS*T 1671
+QEHF+HNTVRGCSYFY+YPAVCEFLQ+NNLLSI+RAHEAQDAGYRMYRKS T
Sbjct: 253 SQEHFSHNTVRGCSYFYNYPAVCEFLQNNNLLSIIRAHEAQDAGYRMYRKSQT 305
Score = 35.0 bits (79), Expect(2) = e-153
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +3
Query: 1671 TGFPSLITIFSAPNY 1715
TGFPSLITIFSAPNY
Sbjct: 306 TGFPSLITIFSAPNY 320
>ref|NP_066955.1| serine/threonine-protein phosphatase 2B catalytic subunit beta
isoform isoform b [Homo sapiens].
Length = 524
Score = 527 bits (1357), Expect(2) = e-153
Identities = 244/293 (83%), Positives = 272/293 (92%)
Frame = +1
Query: 793 PKAIDPKLSTTDRVVKAVPFPPSHRLTAKEVFDNDGKPRVDILKAHLMKEGRLEENVALR 972
P P DRVVKAVPFPP+HRLT++EVFD DG PRVD+LK HL+KEGR++E +ALR
Sbjct: 13 PPPPPPPPPGADRVVKAVPFPPTHRLTSEEVFDLDGIPRVDVLKNHLVKEGRVDEEIALR 72
Query: 973 IITEGASILRQEKNLLDIDAPVTVCGDIHGQFFDLMKLFEVGGSPANTRYLFLGDYVDRG 1152
II EGA+ILR+EK +++++AP+TVCGDIHGQFFDLMKLFEVGGSPANTRYLFLGDYVDRG
Sbjct: 73 IINEGAAILRREKTMIEVEAPITVCGDIHGQFFDLMKLFEVGGSPANTRYLFLGDYVDRG 132
Query: 1153 YFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEYFTFKQECKIKYSEHVYDACMDAFD 1332
YFSIECVLYLW LKILYP TLFLLRGNHECRHLTEYFTFKQECKIKYSE VY+ACM+AFD
Sbjct: 133 YFSIECVLYLWVLKILYPSTLFLLRGNHECRHLTEYFTFKQECKIKYSERVYEACMEAFD 192
Query: 1333 CLPLAALMNQQFLCVHGGLSPEINTLDDIRKLDRFKEPPAYGPMCDILWSDPLEDFGNEK 1512
LPLAAL+NQQFLCVHGGLSPEI+TLDDIR+LDRFKEPPA+GPMCD+LWSDP EDFGNEK
Sbjct: 193 SLPLAALLNQQFLCVHGGLSPEIHTLDDIRRLDRFKEPPAFGPMCDLLWSDPSEDFGNEK 252
Query: 1513 TQEHFTHNTVRGCSYFYSYPAVCEFLQHNNLLSILRAHEAQDAGYRMYRKS*T 1671
+QEHF+HNTVRGCSYFY+YPAVCEFLQ+NNLLSI+RAHEAQDAGYRMYRKS T
Sbjct: 253 SQEHFSHNTVRGCSYFYNYPAVCEFLQNNNLLSIIRAHEAQDAGYRMYRKSQT 305
Score = 35.0 bits (79), Expect(2) = e-153
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +3
Query: 1671 TGFPSLITIFSAPNY 1715
TGFPSLITIFSAPNY
Sbjct: 306 TGFPSLITIFSAPNY 320
>ref|NP_001135826.1| serine/threonine-protein phosphatase 2B catalytic subunit beta
isoform isoform c [Homo sapiens].
Length = 515
Score = 527 bits (1357), Expect(2) = e-153
Identities = 244/293 (83%), Positives = 272/293 (92%)
Frame = +1
Query: 793 PKAIDPKLSTTDRVVKAVPFPPSHRLTAKEVFDNDGKPRVDILKAHLMKEGRLEENVALR 972
P P DRVVKAVPFPP+HRLT++EVFD DG PRVD+LK HL+KEGR++E +ALR
Sbjct: 13 PPPPPPPPPGADRVVKAVPFPPTHRLTSEEVFDLDGIPRVDVLKNHLVKEGRVDEEIALR 72
Query: 973 IITEGASILRQEKNLLDIDAPVTVCGDIHGQFFDLMKLFEVGGSPANTRYLFLGDYVDRG 1152
II EGA+ILR+EK +++++AP+TVCGDIHGQFFDLMKLFEVGGSPANTRYLFLGDYVDRG
Sbjct: 73 IINEGAAILRREKTMIEVEAPITVCGDIHGQFFDLMKLFEVGGSPANTRYLFLGDYVDRG 132
Query: 1153 YFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEYFTFKQECKIKYSEHVYDACMDAFD 1332
YFSIECVLYLW LKILYP TLFLLRGNHECRHLTEYFTFKQECKIKYSE VY+ACM+AFD
Sbjct: 133 YFSIECVLYLWVLKILYPSTLFLLRGNHECRHLTEYFTFKQECKIKYSERVYEACMEAFD 192
Query: 1333 CLPLAALMNQQFLCVHGGLSPEINTLDDIRKLDRFKEPPAYGPMCDILWSDPLEDFGNEK 1512
LPLAAL+NQQFLCVHGGLSPEI+TLDDIR+LDRFKEPPA+GPMCD+LWSDP EDFGNEK
Sbjct: 193 SLPLAALLNQQFLCVHGGLSPEIHTLDDIRRLDRFKEPPAFGPMCDLLWSDPSEDFGNEK 252
Query: 1513 TQEHFTHNTVRGCSYFYSYPAVCEFLQHNNLLSILRAHEAQDAGYRMYRKS*T 1671
+QEHF+HNTVRGCSYFY+YPAVCEFLQ+NNLLSI+RAHEAQDAGYRMYRKS T
Sbjct: 253 SQEHFSHNTVRGCSYFYNYPAVCEFLQNNNLLSIIRAHEAQDAGYRMYRKSQT 305
Score = 35.0 bits (79), Expect(2) = e-153
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +3
Query: 1671 TGFPSLITIFSAPNY 1715
TGFPSLITIFSAPNY
Sbjct: 306 TGFPSLITIFSAPNY 320
>ref|NP_005596.2| serine/threonine-protein phosphatase 2B catalytic subunit gamma
isoform [Homo sapiens].
Length = 512
Score = 522 bits (1345), Expect(2) = e-152
Identities = 240/284 (84%), Positives = 270/284 (95%)
Frame = +1
Query: 814 LSTTDRVVKAVPFPPSHRLTAKEVFDNDGKPRVDILKAHLMKEGRLEENVALRIITEGAS 993
LSTTDRV+KAVPFPP+ RLT KEVF+N GKP+VD+LK HL+KEGRLEE VAL+II +GA+
Sbjct: 8 LSTTDRVIKAVPFPPTQRLTFKEVFEN-GKPKVDVLKNHLVKEGRLEEEVALKIINDGAA 66
Query: 994 ILRQEKNLLDIDAPVTVCGDIHGQFFDLMKLFEVGGSPANTRYLFLGDYVDRGYFSIECV 1173
ILRQEK ++++DAP+TVCGDIHGQFFDLMKLFEVGGSP+NTRYLFLGDYVDRGYFSIECV
Sbjct: 67 ILRQEKTMIEVDAPITVCGDIHGQFFDLMKLFEVGGSPSNTRYLFLGDYVDRGYFSIECV 126
Query: 1174 LYLWALKILYPKTLFLLRGNHECRHLTEYFTFKQECKIKYSEHVYDACMDAFDCLPLAAL 1353
LYLW+LKI +PKTLFLLRGNHECRHLT+YFTFKQEC+IKYSE VYDACM+ FDCLPLAAL
Sbjct: 127 LYLWSLKINHPKTLFLLRGNHECRHLTDYFTFKQECRIKYSEQVYDACMETFDCLPLAAL 186
Query: 1354 MNQQFLCVHGGLSPEINTLDDIRKLDRFKEPPAYGPMCDILWSDPLEDFGNEKTQEHFTH 1533
+NQQFLCVHGG+SPEI +LDDIRKLDRF EPPA+GP+CD+LWSDP ED+GNEKT EH+TH
Sbjct: 187 LNQQFLCVHGGMSPEITSLDDIRKLDRFTEPPAFGPVCDLLWSDPSEDYGNEKTLEHYTH 246
Query: 1534 NTVRGCSYFYSYPAVCEFLQHNNLLSILRAHEAQDAGYRMYRKS 1665
NTVRGCSYFYSYPAVCEFLQ+NNLLSI+RAHEAQDAGYRMYRKS
Sbjct: 247 NTVRGCSYFYSYPAVCEFLQNNNLLSIIRAHEAQDAGYRMYRKS 290
Score = 35.0 bits (79), Expect(2) = e-152
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +3
Query: 1671 TGFPSLITIFSAPNY 1715
TGFPSLITIFSAPNY
Sbjct: 293 TGFPSLITIFSAPNY 307
>ref|NP_001009552.1| serine/threonine-protein phosphatase 2A catalytic subunit beta
isoform [Homo sapiens].
Length = 309
Score = 212 bits (540), Expect(2) = 3e-55
Identities = 110/235 (46%), Positives = 145/235 (61%), Gaps = 1/235 (0%)
Frame = +1
Query: 946 RLEENVALRIITEGASILRQEKNLLDIDAPVTVCGDIHGQFFDLMKLFEVGGSPANTRYL 1125
+L EN + + IL +E N+ ++ PVTVCGD+HGQF DLM+LF +GG +T YL
Sbjct: 22 QLNENQVRTLCEKAKEILTKESNVQEVRCPVTVCGDVHGQFHDLMELFRIGGKSPDTNYL 81
Query: 1126 FLGDYVDRGYFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEYFTFKQECKIKY-SEH 1302
F+GDYVDRGY+S+E V L ALK+ YP+ + +LRGNHE R +T+ + F EC KY + +
Sbjct: 82 FMGDYVDRGYYSVETVTLLVALKVRYPERITILRGNHESRQITQVYGFYDECLRKYGNAN 141
Query: 1303 VYDACMDAFDCLPLAALMNQQFLCVHGGLSPEINTLDDIRKLDRFKEPPAYGPMCDILWS 1482
V+ D FD LPL AL++ Q C+HGGLSP I+TLD IR LDR +E P GPMCD+LWS
Sbjct: 142 VWKYFTDLFDYLPLTALVDGQIFCLHGGLSPSIDTLDHIRALDRLQEVPHEGPMCDLLWS 201
Query: 1483 DPLEDFGNEKTQEHFTHNTVRGCSYFYSYPAVCEFLQHNNLLSILRAHEAQDAGY 1647
DP +D G + RG Y + F N L + RAH+ GY
Sbjct: 202 DP-DDRGGWGI-------SPRGAGYTFGQDISETFNHANGLTLVSRAHQLVMEGY 248
Score = 23.1 bits (48), Expect(2) = 3e-55
Identities = 8/11 (72%), Positives = 11/11 (100%)
Frame = +3
Query: 1683 SLITIFSAPNY 1715
+++TIFSAPNY
Sbjct: 255 NVVTIFSAPNY 265
>ref|NP_002711.1| serine/threonine-protein phosphatase 4 catalytic subunit [Homo
sapiens].
Length = 307
Score = 209 bits (533), Expect = 5e-54
Identities = 106/237 (44%), Positives = 147/237 (62%), Gaps = 1/237 (0%)
Frame = +1
Query: 949 LEENVALRIITEGASILRQEKNLLDIDAPVTVCGDIHGQFFDLMKLFEVGGSPANTRYLF 1128
++E+ + + IL +E N+ +D+PVTVCGDIHGQF+DL +LF VGG T YLF
Sbjct: 20 IKESEVKALCAKAREILVEESNVQRVDSPVTVCGDIHGQFYDLKELFRVGGDVPETNYLF 79
Query: 1129 LGDYVDRGYFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEYFTFKQECKIKY-SEHV 1305
+GD+VDRG++S+E L L ALK+ YP + L+RGNHE R +T+ + F EC KY S V
Sbjct: 80 MGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSVTV 139
Query: 1306 YDACMDAFDCLPLAALMNQQFLCVHGGLSPEINTLDDIRKLDRFKEPPAYGPMCDILWSD 1485
+ C + FD L L+A+++ + CVHGGLSP I TLD IR +DR +E P GPMCD+LWSD
Sbjct: 140 WRYCTEIFDYLSLSAIIDGKIFCVHGGLSPSIQTLDQIRTIDRKQEVPHDGPMCDLLWSD 199
Query: 1486 PLEDFGNEKTQEHFTHNTVRGCSYFYSYPAVCEFLQHNNLLSILRAHEAQDAGYRMY 1656
P + G + RG Y + V +F N++ I RAH+ GY+ +
Sbjct: 200 PEDTTG--------WGVSPRGAGYLFGSDVVAQFNAANDIDMICRAHQLVMEGYKWH 248
>ref|NP_002706.1| serine/threonine-protein phosphatase 2A catalytic subunit alpha
isoform [Homo sapiens].
Length = 309
Score = 207 bits (526), Expect(2) = 1e-53
Identities = 108/235 (45%), Positives = 144/235 (61%), Gaps = 1/235 (0%)
Frame = +1
Query: 946 RLEENVALRIITEGASILRQEKNLLDIDAPVTVCGDIHGQFFDLMKLFEVGGSPANTRYL 1125
+L E+ + + IL +E N+ ++ PVTVCGD+HGQF DLM+LF +GG +T YL
Sbjct: 22 QLSESQVKSLCEKAKEILTKESNVQEVRCPVTVCGDVHGQFHDLMELFRIGGKSPDTNYL 81
Query: 1126 FLGDYVDRGYFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEYFTFKQECKIKY-SEH 1302
F+GDYVDRGY+S+E V L ALK+ Y + + +LRGNHE R +T+ + F EC KY + +
Sbjct: 82 FMGDYVDRGYYSVETVTLLVALKVRYRERITILRGNHESRQITQVYGFYDECLRKYGNAN 141
Query: 1303 VYDACMDAFDCLPLAALMNQQFLCVHGGLSPEINTLDDIRKLDRFKEPPAYGPMCDILWS 1482
V+ D FD LPL AL++ Q C+HGGLSP I+TLD IR LDR +E P GPMCD+LWS
Sbjct: 142 VWKYFTDLFDYLPLTALVDGQIFCLHGGLSPSIDTLDHIRALDRLQEVPHEGPMCDLLWS 201
Query: 1483 DPLEDFGNEKTQEHFTHNTVRGCSYFYSYPAVCEFLQHNNLLSILRAHEAQDAGY 1647
DP +D G + RG Y + F N L + RAH+ GY
Sbjct: 202 DP-DDRGGWGI-------SPRGAGYTFGQDISETFNHANGLTLVSRAHQLVMEGY 248
Score = 23.1 bits (48), Expect(2) = 1e-53
Identities = 8/11 (72%), Positives = 11/11 (100%)
Frame = +3
Query: 1683 SLITIFSAPNY 1715
+++TIFSAPNY
Sbjct: 255 NVVTIFSAPNY 265
Database: RefSeq49_HP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,297,164
Number of sequences in database: 32,964
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 32964
Number of Hits to DB: 60,037,753
Number of extensions: 1581329
Number of successful extensions: 5931
Number of sequences better than 1.0e-05: 25
Number of HSP's gapped: 5862
Number of HSP's successfully gapped: 43
Length of query: 571
Length of database: 18,297,164
Length adjustment: 108
Effective length of query: 463
Effective length of database: 14,737,052
Effective search space: 6823255076
Effective search space used: 6823255076
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to Sscrofa10_2
BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-013432
(1715 letters)
Database: Sscrofa_10.2.fasta
4582 sequences; 2,808,509,378 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Sscrofa_Chr08 402 e-109
Sscrofa_Chr14 88 2e-14
>Sscrofa_Chr08
|| Length = 148491826
Score = 402 bits (203), Expect = e-109
Identities = 251/275 (91%)
Strand = Plus / Plus
Query: 275 tccgcctctcagccgccggggacgctgaggcgcggctggtggcattgacatcggcggccc 334
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128461415 tccgcctctcagccgccggggacgctgaggcgcggctggtggcattgacatcggcggccc 128461474
Query: 335 tgcctctctctctcgcccccggccctccccatgtgatcggtcttaatcccggcagtgtgc 394
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128461475 tgcctctctctctcgcccccggccctccccatgtgatcggtcttaatcccggcagtgtgc 128461534
Query: 395 gcgcgtggggatccattccgctgtgcctgatctccgtgccagggtgggtgctcgtgtgtg 454
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128461535 gcgcgtggggatccattccgctgtgcctgatctccgtgccagggtgggtgctcgtgtgtg 128461594
Query: 455 cgctnnnnnnnnnnnnnnnnnnnnnnnnaagaataaaagaagaaccgagaggcgtgcttt 514
|||| ||||||||||||||||||||||||||||||||
Sbjct: 128461595 cgcttcccctccccatcccccttcccccaagaataaaagaagaaccgagaggcgtgcttt 128461654
Query: 515 gaaaataaataaataaccaccacacacgcgcagcc 549
|||||||||||||||||||||||||||||||||||
Sbjct: 128461655 gaaaataaataaataaccaccacacacgcgcagcc 128461689
Score = 402 bits (203), Expect = e-109
Identities = 203/203 (100%)
Strand = Plus / Plus
Query: 840 agctgtcccatttcctccaagtcaccggcttacggccaaagaagtgtttgataacgatgg 899
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128610280 agctgtcccatttcctccaagtcaccggcttacggccaaagaagtgtttgataacgatgg 128610339
Query: 900 gaaacctcgtgtggatatcttaaaggcacatctcatgaaggagggaaggctggaagagaa 959
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128610340 gaaacctcgtgtggatatcttaaaggcacatctcatgaaggagggaaggctggaagagaa 128610399
Query: 960 tgttgcattgagaataataacagagggggcttcaattcttcgacaggaaaagaatttgct 1019
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128610400 tgttgcattgagaataataacagagggggcttcaattcttcgacaggaaaagaatttgct 128610459
Query: 1020 ggatattgatgcaccagtcacag 1042
|||||||||||||||||||||||
Sbjct: 128610460 ggatattgatgcaccagtcacag 128610482
Score = 307 bits (155), Expect = 1e-80
Identities = 155/155 (100%)
Strand = Plus / Plus
Query: 83 agggtaggttgcgccccggactgtgtctgccgagctccacggctgtgcctgtgtgagtgg 142
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128461223 agggtaggttgcgccccggactgtgtctgccgagctccacggctgtgcctgtgtgagtgg 128461282
Query: 143 aggagcggcgctgggaggcagaggcgggcacgggcgagcacggcggcgggacgtctctgg 202
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128461283 aggagcggcgctgggaggcagaggcgggcacgggcgagcacggcggcgggacgtctctgg 128461342
Query: 203 cggccgcggatcagcggcagcggtcggtgtgggga 237
|||||||||||||||||||||||||||||||||||
Sbjct: 128461343 cggccgcggatcagcggcagcggtcggtgtgggga 128461377
Score = 295 bits (149), Expect = 4e-77
Identities = 189/209 (90%)
Strand = Plus / Plus
Query: 633 agtaactttaaagccagctcagagcccagacctccagccaagcggtttgcannnnnnnnn 692
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128461773 agtaactttaaagccagctcagagcccagacctccagccaagcggtttgcagcgcggcgg 128461832
Query: 693 nnnnnnnnnnnttgagtgttggcccgccagtccggtcggggtgtgcagtaggacggacga 752
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128461833 cggcggcggcgttgagtgttggcccgccagtccggtcggggtgtgcagtaggacggacga 128461892
Query: 753 gcagcgcgtcgctgtcccccggcggctggagatgtccgagcccaaggcaattgatcccaa 812
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128461893 gcagcgcgtcgctgtcccccggcggctggagatgtccgagcccaaggcaattgatcccaa 128461952
Query: 813 gttgtcgacgaccgacagggtggtgaaag 841
|||||||||||||||||||||||||||||
Sbjct: 128461953 gttgtcgacgaccgacagggtggtgaaag 128461981
Score = 289 bits (146), Expect = 3e-75
Identities = 146/146 (100%)
Strand = Plus / Plus
Query: 1280 gtaaaattaagtattcagaacacgtatatgatgcctgcatggatgcctttgactgcctcc 1339
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128736329 gtaaaattaagtattcagaacacgtatatgatgcctgcatggatgcctttgactgcctcc 128736388
Query: 1340 cactggctgccctgatgaaccagcagttcctgtgtgtccacggtggtttgtctccagaga 1399
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128736389 cactggctgccctgatgaaccagcagttcctgtgtgtccacggtggtttgtctccagaga 128736448
Query: 1400 ttaacactttagatgatatcagaaaa 1425
||||||||||||||||||||||||||
Sbjct: 128736449 ttaacactttagatgatatcagaaaa 128736474
Score = 278 bits (140), Expect = 1e-71
Identities = 140/140 (100%)
Strand = Plus / Plus
Query: 1426 ttagaccgattcaaggaaccacctgcttatggacctatgtgtgacatcctgtggtcagac 1485
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128740135 ttagaccgattcaaggaaccacctgcttatggacctatgtgtgacatcctgtggtcagac 128740194
Query: 1486 cccctggaggattttggaaatgagaagactcaggaacatttcactcacaacacagtcagg 1545
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128740195 cccctggaggattttggaaatgagaagactcaggaacatttcactcacaacacagtcagg 128740254
Query: 1546 gggtgttcatacttctacag 1565
||||||||||||||||||||
Sbjct: 128740255 gggtgttcatacttctacag 128740274
Score = 254 bits (128), Expect = 1e-64
Identities = 128/128 (100%)
Strand = Plus / Plus
Query: 1040 cagtttgtggggacatccatggacaattctttgacttgatgaaactctttgaagtggggg 1099
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128726503 cagtttgtggggacatccatggacaattctttgacttgatgaaactctttgaagtggggg 128726562
Query: 1100 gatctcctgccaacactcgctacctcttcttaggggactatgttgacagagggtacttca 1159
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128726563 gatctcctgccaacactcgctacctcttcttaggggactatgttgacagagggtacttca 128726622
Query: 1160 gtatcgaa 1167
||||||||
Sbjct: 128726623 gtatcgaa 128726630
Score = 230 bits (116), Expect = 2e-57
Identities = 116/116 (100%)
Strand = Plus / Plus
Query: 1168 tgtgtgctgtacttgtgggctttgaaaattctttaccccaaaacactgtttttacttcgt 1227
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128735200 tgtgtgctgtacttgtgggctttgaaaattctttaccccaaaacactgtttttacttcgt 128735259
Query: 1228 ggaaatcatgaatgtagacatctaacagagtatttcacatttaaacaagaatgtaa 1283
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128735260 ggaaatcatgaatgtagacatctaacagagtatttcacatttaaacaagaatgtaa 128735315
Score = 123 bits (62), Expect = 3e-25
Identities = 72/74 (97%), Gaps = 1/74 (1%)
Strand = Plus / Plus
Query: 1643 ggtaccgcatgtacaggaaaagctaaaca-caggcttcccttctctaattacaatttttt 1701
||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||
Sbjct: 128779392 ggtaccgcatgtacaggaaaagccaaacaacaggcttcccttctctaattacaatttttt 128779451
Query: 1702 cagcaccaaattac 1715
||||||||||||||
Sbjct: 128779452 cagcaccaaattac 128779465
>Sscrofa_Chr14
|| Length = 153851969
Score = 87.7 bits (44), Expect = 2e-14
Identities = 74/84 (88%)
Strand = Plus / Plus
Query: 1563 cagttacccggctgtatgtgaattcttacagcacaataacttgttatctatactccgagc 1622
||||||||| || || |||||||| |||||| ||||||| |||||||| ||| || ||||
Sbjct: 7197257 cagttaccctgcagtttgtgaatttttacagaacaataatttgttatcaataatcagagc 7197316
Query: 1623 ccatgaagcccaagatgcagggta 1646
|||||||||||||||||| |||||
Sbjct: 7197317 ccatgaagcccaagatgctgggta 7197340
Score = 77.8 bits (39), Expect = 2e-11
Identities = 99/119 (83%)
Strand = Plus / Plus
Query: 1045 tgtggggacatccatggacaattctttgacttgatgaaactctttgaagtggggggatct 1104
||||| ||||| |||||||||||||||||||||||||| | |||||||| || || ||
Sbjct: 7176747 tgtggtgacattcatggacaattctttgacttgatgaagttgtttgaagttggaggttca 7176806
Query: 1105 cctgccaacactcgctacctcttcttaggggactatgttgacagagggtacttcagtat 1163
||| ||||| ||||||||||| | || |||||||| |||||||| || ||||||||
Sbjct: 7176807 cctagtaacacacgctacctctttctgggagactatgtggacagaggctatttcagtat 7176865
Score = 71.9 bits (36), Expect = 1e-09
Identities = 69/80 (86%)
Strand = Plus / Plus
Query: 1204 cccaaaacactgtttttacttcgtggaaatcatgaatgtagacatctaacagagtatttc 1263
||||||||| ||||| | ||||| |||||||||||||| || ||||| ||||| ||||||
Sbjct: 7185086 cccaaaacattgtttctgcttcgaggaaatcatgaatgcaggcatcttacagaatatttc 7185145
Query: 1264 acatttaaacaagaatgtaa 1283
|| || ||||| ||||||||
Sbjct: 7185146 accttcaaacaggaatgtaa 7185165
Score = 60.0 bits (30), Expect = 4e-06
Identities = 60/70 (85%)
Strand = Plus / Minus
Query: 1040 cagtttgtggggacatccatggacaattctttgacttgatgaaactctttgaagtggggg 1099
|||| ||||| ||||||||||| ||||| ||||| |||||||||| |||||||| || |
Sbjct: 82413901 cagtgtgtggtgacatccatggccaattttttgatctgatgaaactttttgaagtaggag 82413842
Query: 1100 gatctcctgc 1109
|||| |||||
Sbjct: 82413841 gatcacctgc 82413832
Database: Sscrofa_10.2.fasta
Posted date: Nov 16, 2011 10:34 AM
Number of letters in database: 2,808,509,378
Number of sequences in database: 4582
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4582
Number of Hits to DB: 41,434,119
Number of extensions: 403
Number of successful extensions: 403
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 401
Number of HSP's successfully gapped: 15
Length of query: 1715
Length of database: 2,808,509,378
Length adjustment: 22
Effective length of query: 1693
Effective length of database: 2,808,408,574
Effective search space: 4754635715782
Effective search space used: 4754635715782
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 18 (36.2 bits)
S2: 30 (60.0 bits)