Search to RefSeqCP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-013451
(1348 letters)
Database: RefSeq49_CP.fasta
33,336 sequences; 18,874,504 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_545701.2| PREDICTED: similar to regulator of G-protein si... 352 4e-97
Alignment gi|XP_849550.1| PREDICTED: similar to regulator of G-protein si... 163 3e-40
Alignment gi|XP_859033.1| PREDICTED: similar to Regulator of G-protein si... 163 3e-40
Alignment gi|XP_547431.2| PREDICTED: similar to Regulator of G-protein si... 163 3e-40
Alignment gi|XP_545784.2| PREDICTED: similar to Regulator of G-protein si... 162 7e-40
Alignment gi|XP_849754.1| PREDICTED: similar to regulator of G-protein si... 161 1e-39
Alignment gi|XP_859759.1| PREDICTED: similar to Regulator of G-protein si... 161 2e-39
Alignment gi|XP_538806.2| PREDICTED: similar to regulator of G-protein si... 160 3e-39
Alignment gi|XP_849782.1| PREDICTED: similar to Regulator of G-protein si... 159 4e-39
Alignment gi|XP_545783.2| PREDICTED: similar to Regulator of G-protein si... 150 3e-36
>ref|XP_545701.2| PREDICTED: similar to regulator of G-protein signalling 2, 24kDa
[Canis familiaris].
Length = 285
Score = 352 bits (904), Expect = 4e-97
Identities = 176/202 (87%), Positives = 179/202 (88%)
Frame = +3
Query: 63 HDCGPMDKSAGTGPKSEEKREKMKRTLLKDWKTRLSYFLQNXXXXXXXXXXXXXXXQTFI 242
HDCG MDKS+ K EEKREKMKRTLLKDWKTRLSYFLQN QTFI
Sbjct: 85 HDCGSMDKSSSNSSKHEEKREKMKRTLLKDWKTRLSYFLQNSSSPGKPKNGKKSKQQTFI 144
Query: 243 KPSPEEAQLWAEAFDELLASKYGLAAFRAFLKSEFCEENIEFWLACEDFKKTKSPQKLSS 422
KPSPEEAQLW+EAFDELLASKYGLAAFRAFLKSEFCEENIEFWLACEDFKKTKSPQKLSS
Sbjct: 145 KPSPEEAQLWSEAFDELLASKYGLAAFRAFLKSEFCEENIEFWLACEDFKKTKSPQKLSS 204
Query: 423 KARKIYTDFIEKEAPKEINIDFQTKTLIAQNIQEATSGCFTTAQKRVYSLMENNSYPRFL 602
KARKIYTDFIEKEAPKEINIDFQTKTLIAQNIQEATSGCFTTAQKRVYSLMENNSYPRFL
Sbjct: 205 KARKIYTDFIEKEAPKEINIDFQTKTLIAQNIQEATSGCFTTAQKRVYSLMENNSYPRFL 264
Query: 603 ESEFYQDLCRKPPQITTEPHAT 668
ESEFYQDLC+K PQI TEPHAT
Sbjct: 265 ESEFYQDLCKK-PQIATEPHAT 285
>ref|XP_849550.1| PREDICTED: similar to regulator of G-protein signalling 8 isoform 2
[Canis familiaris].
Length = 198
Score = 163 bits (413), Expect = 3e-40
Identities = 76/126 (60%), Positives = 100/126 (79%)
Frame = +3
Query: 249 SPEEAQLWAEAFDELLASKYGLAAFRAFLKSEFCEENIEFWLACEDFKKTKSPQKLSSKA 428
S EEA WA++FD LL+ KYG+AAFRAFLK+EF EEN+EFWLACE+FKKT+S KL SKA
Sbjct: 64 STEEATRWADSFDVLLSHKYGVAAFRAFLKTEFSEENLEFWLACEEFKKTRSTAKLVSKA 123
Query: 429 RKIYTDFIEKEAPKEINIDFQTKTLIAQNIQEATSGCFTTAQKRVYSLMENNSYPRFLES 608
+I+ +F++ +AP+E+NIDFQT+ +N+QE + CF AQ +V+SLME +SYPRFL S
Sbjct: 124 HRIFEEFVDVQAPREVNIDFQTREATRKNMQEPSLTCFDQAQGKVHSLMEKDSYPRFLRS 183
Query: 609 EFYQDL 626
+ Y DL
Sbjct: 184 KMYLDL 189
>ref|XP_859033.1| PREDICTED: similar to Regulator of G-protein signaling 8 (RGS8)
isoform 3 [Canis familiaris].
Length = 180
Score = 163 bits (413), Expect = 3e-40
Identities = 76/126 (60%), Positives = 100/126 (79%)
Frame = +3
Query: 249 SPEEAQLWAEAFDELLASKYGLAAFRAFLKSEFCEENIEFWLACEDFKKTKSPQKLSSKA 428
S EEA WA++FD LL+ KYG+AAFRAFLK+EF EEN+EFWLACE+FKKT+S KL SKA
Sbjct: 46 STEEATRWADSFDVLLSHKYGVAAFRAFLKTEFSEENLEFWLACEEFKKTRSTAKLVSKA 105
Query: 429 RKIYTDFIEKEAPKEINIDFQTKTLIAQNIQEATSGCFTTAQKRVYSLMENNSYPRFLES 608
+I+ +F++ +AP+E+NIDFQT+ +N+QE + CF AQ +V+SLME +SYPRFL S
Sbjct: 106 HRIFEEFVDVQAPREVNIDFQTREATRKNMQEPSLTCFDQAQGKVHSLMEKDSYPRFLRS 165
Query: 609 EFYQDL 626
+ Y DL
Sbjct: 166 KMYLDL 171
>ref|XP_547431.2| PREDICTED: similar to Regulator of G-protein signaling 8 (RGS8)
isoform 1 [Canis familiaris].
Length = 327
Score = 163 bits (413), Expect = 3e-40
Identities = 76/126 (60%), Positives = 100/126 (79%)
Frame = +3
Query: 249 SPEEAQLWAEAFDELLASKYGLAAFRAFLKSEFCEENIEFWLACEDFKKTKSPQKLSSKA 428
S EEA WA++FD LL+ KYG+AAFRAFLK+EF EEN+EFWLACE+FKKT+S KL SKA
Sbjct: 46 STEEATRWADSFDVLLSHKYGVAAFRAFLKTEFSEENLEFWLACEEFKKTRSTAKLVSKA 105
Query: 429 RKIYTDFIEKEAPKEINIDFQTKTLIAQNIQEATSGCFTTAQKRVYSLMENNSYPRFLES 608
+I+ +F++ +AP+E+NIDFQT+ +N+QE + CF AQ +V+SLME +SYPRFL S
Sbjct: 106 HRIFEEFVDVQAPREVNIDFQTREATRKNMQEPSLTCFDQAQGKVHSLMEKDSYPRFLRS 165
Query: 609 EFYQDL 626
+ Y DL
Sbjct: 166 KMYLDL 171
Score = 154 bits (390), Expect = 1e-37
Identities = 72/124 (58%), Positives = 96/124 (77%)
Frame = +3
Query: 255 EEAQLWAEAFDELLASKYGLAAFRAFLKSEFCEENIEFWLACEDFKKTKSPQKLSSKARK 434
E+ W E+FD LL+SK G+AAF AFLK+EF EEN+EFWLACE+FKK +S KL+S+A K
Sbjct: 182 EDVLGWKESFDSLLSSKNGVAAFHAFLKTEFSEENLEFWLACEEFKKLRSAAKLASRAHK 241
Query: 435 IYTDFIEKEAPKEINIDFQTKTLIAQNIQEATSGCFTTAQKRVYSLMENNSYPRFLESEF 614
I+ +FI EAPKE+NID +T+ L +N+Q AT+ CF AQ ++ +LME +SYPRFL+S
Sbjct: 242 IFEEFIRSEAPKEVNIDHETRELTEKNLQAATATCFDVAQGKIRTLMEKDSYPRFLKSPA 301
Query: 615 YQDL 626
Y+DL
Sbjct: 302 YRDL 305
>ref|XP_545784.2| PREDICTED: similar to Regulator of G-protein signaling 5 (RGS5)
isoform 1 [Canis familiaris].
Length = 181
Score = 162 bits (410), Expect = 7e-40
Identities = 74/130 (56%), Positives = 101/130 (77%)
Frame = +3
Query: 243 KPSPEEAQLWAEAFDELLASKYGLAAFRAFLKSEFCEENIEFWLACEDFKKTKSPQKLSS 422
KPS +EA W ++ D+LL + YGLA+F++FLKSEF EEN+EFWLACED+KK KSP K++
Sbjct: 52 KPSLDEALQWRDSLDKLLQNNYGLASFKSFLKSEFSEENLEFWLACEDYKKIKSPTKMAE 111
Query: 423 KARKIYTDFIEKEAPKEINIDFQTKTLIAQNIQEATSGCFTTAQKRVYSLMENNSYPRFL 602
KA+KIY +FI+ EAPKE+NID TK + +++ E + F AQKR+Y+LME +S PRF+
Sbjct: 112 KAKKIYEEFIQTEAPKEVNIDHFTKDITMKSLVEPSLSSFDVAQKRIYALMEKDSLPRFV 171
Query: 603 ESEFYQDLCR 632
SEFYQ+L +
Sbjct: 172 RSEFYQELIK 181
>ref|XP_849754.1| PREDICTED: similar to regulator of G-protein signalling 2, 24kDa
[Canis familiaris].
Length = 222
Score = 161 bits (408), Expect = 1e-39
Identities = 77/142 (54%), Positives = 104/142 (73%)
Frame = +3
Query: 270 WAEAFDELLASKYGLAAFRAFLKSEFCEENIEFWLACEDFKKTKSPQKLSSKARKIYTDF 449
W+E D LL ++ GL AFR FLKSEF EEN+EFWLACEDFKKT+S +K++SKA+ IY++F
Sbjct: 3 WSENMDTLLTNQAGLDAFRTFLKSEFSEENVEFWLACEDFKKTESAEKIASKAKMIYSEF 62
Query: 450 IEKEAPKEINIDFQTKTLIAQNIQEATSGCFTTAQKRVYSLMENNSYPRFLESEFYQDLC 629
IE +APKEINIDF T+ LI++NI E T CF AQK +YSLM +S+PRFL+SE Y+ L
Sbjct: 63 IEADAPKEINIDFSTRDLISKNIAEPTLKCFDEAQKLIYSLMAKDSFPRFLKSEIYKKLV 122
Query: 630 RKPPQITTEPHAT*DGNGSPAT 695
T + + + + +P++
Sbjct: 123 NSKQDGTRQEYKSKNSEENPSS 144
>ref|XP_859759.1| PREDICTED: similar to Regulator of G-protein signaling 5 (RGS5)
isoform 2 [Canis familiaris].
Length = 144
Score = 161 bits (407), Expect = 2e-39
Identities = 73/130 (56%), Positives = 101/130 (77%)
Frame = +3
Query: 243 KPSPEEAQLWAEAFDELLASKYGLAAFRAFLKSEFCEENIEFWLACEDFKKTKSPQKLSS 422
+PS +EA W ++ D+LL + YGLA+F++FLKSEF EEN+EFWLACED+KK KSP K++
Sbjct: 15 RPSLDEALQWRDSLDKLLQNNYGLASFKSFLKSEFSEENLEFWLACEDYKKIKSPTKMAE 74
Query: 423 KARKIYTDFIEKEAPKEINIDFQTKTLIAQNIQEATSGCFTTAQKRVYSLMENNSYPRFL 602
KA+KIY +FI+ EAPKE+NID TK + +++ E + F AQKR+Y+LME +S PRF+
Sbjct: 75 KAKKIYEEFIQTEAPKEVNIDHFTKDITMKSLVEPSLSSFDVAQKRIYALMEKDSLPRFV 134
Query: 603 ESEFYQDLCR 632
SEFYQ+L +
Sbjct: 135 RSEFYQELIK 144
>ref|XP_538806.2| PREDICTED: similar to regulator of G-protein signalling 3 isoform 6
[Canis familiaris].
Length = 501
Score = 160 bits (405), Expect = 3e-39
Identities = 79/171 (46%), Positives = 107/171 (62%)
Frame = +3
Query: 114 EKREKMKRTLLKDWKTRLSYFLQNXXXXXXXXXXXXXXXQTFIKPSPEEAQLWAEAFDEL 293
++R MK KD K +L F + KP+ EEA W E+ ++L
Sbjct: 323 QRRHTMKEA--KDMKNKLGIFRRRNESPGAQPAGKADKMVKSFKPTSEEALKWGESLEKL 380
Query: 294 LASKYGLAAFRAFLKSEFCEENIEFWLACEDFKKTKSPQKLSSKARKIYTDFIEKEAPKE 473
L KYGLA F+AFL++EF EEN+EFWLACEDFKK KS K+++KA+KI+ ++I +A KE
Sbjct: 381 LLHKYGLAVFQAFLRTEFSEENLEFWLACEDFKKVKSQSKMAAKAKKIFAEYIAIQACKE 440
Query: 474 INIDFQTKTLIAQNIQEATSGCFTTAQKRVYSLMENNSYPRFLESEFYQDL 626
+N+D T+ N+Q T GCF AQKR++ LME +SYPRFL S+ Y DL
Sbjct: 441 VNLDSYTREHTKDNLQSVTRGCFDLAQKRIFGLMEKDSYPRFLRSDLYLDL 491
>ref|XP_849782.1| PREDICTED: similar to Regulator of G-protein signaling 18 (RGS18)
[Canis familiaris].
Length = 235
Score = 159 bits (403), Expect = 4e-39
Identities = 82/187 (43%), Positives = 114/187 (60%)
Frame = +3
Query: 93 GTGPKSEEKREKMKRTLLKDWKTRLSYFLQNXXXXXXXXXXXXXXXQTFIKPSPEEAQLW 272
G+G + K K++ K+ + RLS +Q + SPEEA +W
Sbjct: 27 GSGKEETSKEAKIRA---KEKRNRLSLLVQKPEFHEETHFSRSGHLARETRVSPEEAVIW 83
Query: 273 AEAFDELLASKYGLAAFRAFLKSEFCEENIEFWLACEDFKKTKSPQKLSSKARKIYTDFI 452
E+FD+LL+ K GL F FLK+EF EENIEFW+ACE+FK++K PQ++ KA+ IY FI
Sbjct: 84 GESFDKLLSHKDGLETFTRFLKTEFSEENIEFWIACEEFKRSKDPQQIIPKAKAIYEKFI 143
Query: 453 EKEAPKEINIDFQTKTLIAQNIQEATSGCFTTAQKRVYSLMENNSYPRFLESEFYQDLCR 632
+ +AP+E+N+DF TK +I ++I + T F AQ RVY LME +SY RFL+S+ Y DL
Sbjct: 144 QTDAPQEVNLDFHTKEVITKSITQPTLHSFDAAQSRVYQLMEQDSYTRFLKSDIYLDLIE 203
Query: 633 KPPQITT 653
PQ T
Sbjct: 204 GRPQRPT 210
>ref|XP_545783.2| PREDICTED: similar to Regulator of G-protein signaling 4 (RGS4)
(RGP4) [Canis familiaris].
Length = 205
Score = 150 bits (379), Expect = 3e-36
Identities = 76/161 (47%), Positives = 105/161 (65%), Gaps = 1/161 (0%)
Frame = +3
Query: 147 KDWKTRLSYFLQNXXXXXXXXXXXXXXXQTFI-KPSPEEAQLWAEAFDELLASKYGLAAF 323
KD K RL + LQ + S EE + WAE+ + L++ + GLAAF
Sbjct: 17 KDMKHRLGFLLQKSDSCEHNSSHSKKDRVVVCQRVSQEEVKKWAESLENLISHECGLAAF 76
Query: 324 RAFLKSEFCEENIEFWLACEDFKKTKSPQKLSSKARKIYTDFIEKEAPKEINIDFQTKTL 503
+AFLKSE+ EENI+FW++CE++KK KSP KLS KA+KIY +FI +A KE+N+D T+
Sbjct: 77 KAFLKSEYSEENIDFWISCEEYKKIKSPSKLSPKAKKIYNEFISVQATKEVNLDSCTREE 136
Query: 504 IAQNIQEATSGCFTTAQKRVYSLMENNSYPRFLESEFYQDL 626
++N+ E T CF AQKR+++LME +SY RFL+S FY DL
Sbjct: 137 TSRNMLEPTITCFDEAQKRIFNLMEKDSYRRFLKSRFYLDL 177
Database: RefSeq49_CP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,874,504
Number of sequences in database: 33,336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33336
Number of Hits to DB: 49,732,173
Number of extensions: 1217707
Number of successful extensions: 3826
Number of sequences better than 1.0e-05: 34
Number of HSP's gapped: 3810
Number of HSP's successfully gapped: 35
Length of query: 449
Length of database: 18,874,504
Length adjustment: 106
Effective length of query: 343
Effective length of database: 15,340,888
Effective search space: 5261924584
Effective search space used: 5261924584
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to RefSeqBP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-013451
(1348 letters)
Database: RefSeq49_BP.fasta
33,088 sequences; 17,681,374 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001069064.1| regulator of G-protein signaling 2 [Bos taur... 375 e-104
Alignment gi|XP_002686857.1| PREDICTED: regulator of G-protein signaling ... 375 e-104
Alignment gi|XP_873525.2| PREDICTED: regulator of G-protein signaling 2 [... 375 e-104
Alignment gi|XP_002693976.1| PREDICTED: regulator of G-protein signaling ... 164 2e-40
Alignment gi|XP_002701547.1| PREDICTED: regulator of G-protein signaling ... 164 2e-40
Alignment gi|NP_001179900.1| regulator of G-protein signaling 18 [Bos tau... 159 4e-39
Alignment gi|XP_002693977.1| PREDICTED: regulator of G-protein signalling... 159 4e-39
Alignment gi|NP_001029879.1| regulator of G-protein signaling 5 [Bos taur... 157 2e-38
Alignment gi|NP_776875.1| regulator of G-protein signaling 16 [Bos taurus]. 151 1e-36
Alignment gi|NP_001040065.1| regulator of G-protein signaling 4 [Bos taur... 148 1e-35
>ref|NP_001069064.1| regulator of G-protein signaling 2 [Bos taurus].
Length = 211
Score = 375 bits (962), Expect = e-104
Identities = 185/212 (87%), Positives = 193/212 (91%)
Frame = +3
Query: 33 MQSAMFLTVHHDCGPMDKSAGTGPKSEEKREKMKRTLLKDWKTRLSYFLQNXXXXXXXXX 212
MQSA+FL V H+CGPMDK AGTGPK+EEKREKMKRTLLKDWK+RLSYFLQN
Sbjct: 1 MQSALFLAVQHECGPMDKGAGTGPKNEEKREKMKRTLLKDWKSRLSYFLQNSSSPGKPKT 60
Query: 213 XXXXXXQTFIKPSPEEAQLWAEAFDELLASKYGLAAFRAFLKSEFCEENIEFWLACEDFK 392
QTFIKPSPEEAQLW+EAFDELLASKYGLAAFRAFLKSEFCEENIEFWLACEDFK
Sbjct: 61 GKKSKQQTFIKPSPEEAQLWSEAFDELLASKYGLAAFRAFLKSEFCEENIEFWLACEDFK 120
Query: 393 KTKSPQKLSSKARKIYTDFIEKEAPKEINIDFQTKTLIAQNIQEATSGCFTTAQKRVYSL 572
KTKSPQKLSSKA+KIYTDFIEKEAPKEINIDFQTK+LIAQNIQEATSGCFTTAQKRVYSL
Sbjct: 121 KTKSPQKLSSKAKKIYTDFIEKEAPKEINIDFQTKSLIAQNIQEATSGCFTTAQKRVYSL 180
Query: 573 MENNSYPRFLESEFYQDLCRKPPQITTEPHAT 668
MENNSYPRFLESEFYQDLC+K PQITTEPHAT
Sbjct: 181 MENNSYPRFLESEFYQDLCKK-PQITTEPHAT 211
>ref|XP_002686857.1| PREDICTED: regulator of G-protein signaling 2-like [Bos taurus].
Length = 211
Score = 375 bits (962), Expect = e-104
Identities = 185/212 (87%), Positives = 193/212 (91%)
Frame = +3
Query: 33 MQSAMFLTVHHDCGPMDKSAGTGPKSEEKREKMKRTLLKDWKTRLSYFLQNXXXXXXXXX 212
MQSA+FL V H+CGPMDK AGTGPK+EEKREKMKRTLLKDWK+RLSYFLQN
Sbjct: 1 MQSALFLAVQHECGPMDKGAGTGPKNEEKREKMKRTLLKDWKSRLSYFLQNSSSPGKPKT 60
Query: 213 XXXXXXQTFIKPSPEEAQLWAEAFDELLASKYGLAAFRAFLKSEFCEENIEFWLACEDFK 392
QTFIKPSPEEAQLW+EAFDELLASKYGLAAFRAFLKSEFCEENIEFWLACEDFK
Sbjct: 61 GKKSKQQTFIKPSPEEAQLWSEAFDELLASKYGLAAFRAFLKSEFCEENIEFWLACEDFK 120
Query: 393 KTKSPQKLSSKARKIYTDFIEKEAPKEINIDFQTKTLIAQNIQEATSGCFTTAQKRVYSL 572
KTKSPQKLSSKA+KIYTDFIEKEAPKEINIDFQTK+LIAQNIQEATSGCFTTAQKRVYSL
Sbjct: 121 KTKSPQKLSSKAKKIYTDFIEKEAPKEINIDFQTKSLIAQNIQEATSGCFTTAQKRVYSL 180
Query: 573 MENNSYPRFLESEFYQDLCRKPPQITTEPHAT 668
MENNSYPRFLESEFYQDLC+K PQITTEPHAT
Sbjct: 181 MENNSYPRFLESEFYQDLCKK-PQITTEPHAT 211
>ref|XP_873525.2| PREDICTED: regulator of G-protein signaling 2 [Bos taurus].
Length = 211
Score = 375 bits (962), Expect = e-104
Identities = 185/212 (87%), Positives = 193/212 (91%)
Frame = +3
Query: 33 MQSAMFLTVHHDCGPMDKSAGTGPKSEEKREKMKRTLLKDWKTRLSYFLQNXXXXXXXXX 212
MQSA+FL V H+CGPMDK AGTGPK+EEKREKMKRTLLKDWK+RLSYFLQN
Sbjct: 1 MQSALFLAVQHECGPMDKGAGTGPKNEEKREKMKRTLLKDWKSRLSYFLQNSSSPGKPKT 60
Query: 213 XXXXXXQTFIKPSPEEAQLWAEAFDELLASKYGLAAFRAFLKSEFCEENIEFWLACEDFK 392
QTFIKPSPEEAQLW+EAFDELLASKYGLAAFRAFLKSEFCEENIEFWLACEDFK
Sbjct: 61 GKKSKQQTFIKPSPEEAQLWSEAFDELLASKYGLAAFRAFLKSEFCEENIEFWLACEDFK 120
Query: 393 KTKSPQKLSSKARKIYTDFIEKEAPKEINIDFQTKTLIAQNIQEATSGCFTTAQKRVYSL 572
KTKSPQKLSSKA+KIYTDFIEKEAPKEINIDFQTK+LIAQNIQEATSGCFTTAQKRVYSL
Sbjct: 121 KTKSPQKLSSKAKKIYTDFIEKEAPKEINIDFQTKSLIAQNIQEATSGCFTTAQKRVYSL 180
Query: 573 MENNSYPRFLESEFYQDLCRKPPQITTEPHAT 668
MENNSYPRFLESEFYQDLC+K PQITTEPHAT
Sbjct: 181 MENNSYPRFLESEFYQDLCKK-PQITTEPHAT 211
>ref|XP_002693976.1| PREDICTED: regulator of G-protein signaling 2-like [Bos taurus].
Length = 152
Score = 164 bits (415), Expect = 2e-40
Identities = 79/130 (60%), Positives = 99/130 (76%)
Frame = +3
Query: 237 FIKPSPEEAQLWAEAFDELLASKYGLAAFRAFLKSEFCEENIEFWLACEDFKKTKSPQKL 416
F + E W+E D LL ++ GL AFR FLKSEF EEN+EFWLACEDFKKT+S +K+
Sbjct: 7 FHRSPTTETVAWSENMDTLLTNQAGLDAFRTFLKSEFSEENVEFWLACEDFKKTESAEKI 66
Query: 417 SSKARKIYTDFIEKEAPKEINIDFQTKTLIAQNIQEATSGCFTTAQKRVYSLMENNSYPR 596
+SKAR IY++FIE +APKEINIDF T+ LI++NI E T CF AQK +YSLM N+S+PR
Sbjct: 67 ASKARMIYSEFIEADAPKEINIDFSTRDLISKNIAEPTLKCFDEAQKLIYSLMANDSFPR 126
Query: 597 FLESEFYQDL 626
FL+SE Y+ L
Sbjct: 127 FLKSEIYKKL 136
>ref|XP_002701547.1| PREDICTED: regulator of G-protein signaling 2-like [Bos taurus].
Length = 152
Score = 164 bits (415), Expect = 2e-40
Identities = 79/130 (60%), Positives = 99/130 (76%)
Frame = +3
Query: 237 FIKPSPEEAQLWAEAFDELLASKYGLAAFRAFLKSEFCEENIEFWLACEDFKKTKSPQKL 416
F + E W+E D LL ++ GL AFR FLKSEF EEN+EFWLACEDFKKT+S +K+
Sbjct: 7 FHRSPTTETVAWSENMDTLLTNQAGLDAFRTFLKSEFSEENVEFWLACEDFKKTESAEKI 66
Query: 417 SSKARKIYTDFIEKEAPKEINIDFQTKTLIAQNIQEATSGCFTTAQKRVYSLMENNSYPR 596
+SKAR IY++FIE +APKEINIDF T+ LI++NI E T CF AQK +YSLM N+S+PR
Sbjct: 67 ASKARMIYSEFIEADAPKEINIDFSTRDLISKNIAEPTLKCFDEAQKLIYSLMANDSFPR 126
Query: 597 FLESEFYQDL 626
FL+SE Y+ L
Sbjct: 127 FLKSEIYKKL 136
>ref|NP_001179900.1| regulator of G-protein signaling 18 [Bos taurus].
Length = 235
Score = 159 bits (403), Expect = 4e-39
Identities = 88/210 (41%), Positives = 122/210 (58%), Gaps = 5/210 (2%)
Frame = +3
Query: 39 SAMFLTVHHDCGPMDKSA-----GTGPKSEEKREKMKRTLLKDWKTRLSYFLQNXXXXXX 203
S +F + C P K+ G+G + K K++ K+ + RLS +Q
Sbjct: 4 SLVFFSQLSMCEPKAKTIFKLIHGSGKEETSKEAKIRA---KEKRNRLSLLVQKPVFYDD 60
Query: 204 XXXXXXXXXQTFIKPSPEEAQLWAEAFDELLASKYGLAAFRAFLKSEFCEENIEFWLACE 383
+ SPEEA W E+FD+LL+ K GL F FLK+EF EENIEFW+ACE
Sbjct: 61 TPSTRSGQLAKETRVSPEEAIKWGESFDKLLSHKDGLETFTRFLKTEFSEENIEFWIACE 120
Query: 384 DFKKTKSPQKLSSKARKIYTDFIEKEAPKEINIDFQTKTLIAQNIQEATSGCFTTAQKRV 563
DFKK+K PQ++ KA+ IY FI+ +AP+E+N+DF TK +I+++I + T F AQ RV
Sbjct: 121 DFKKSKDPQQIIRKAKAIYEKFIQNDAPQEVNLDFHTKEIISKSITQPTLQSFDVAQSRV 180
Query: 564 YSLMENNSYPRFLESEFYQDLCRKPPQITT 653
Y LME +SY RFL+S+ Y DL + Q T
Sbjct: 181 YQLMEQDSYMRFLKSDIYLDLTKGRSQRPT 210
>ref|XP_002693977.1| PREDICTED: regulator of G-protein signalling 18-like [Bos taurus].
Length = 235
Score = 159 bits (403), Expect = 4e-39
Identities = 88/210 (41%), Positives = 122/210 (58%), Gaps = 5/210 (2%)
Frame = +3
Query: 39 SAMFLTVHHDCGPMDKSA-----GTGPKSEEKREKMKRTLLKDWKTRLSYFLQNXXXXXX 203
S +F + C P K+ G+G + K K++ K+ + RLS +Q
Sbjct: 4 SLVFFSQLSMCEPKAKTIFKLIHGSGKEETSKEAKIRA---KEKRNRLSLLVQKPVFYDD 60
Query: 204 XXXXXXXXXQTFIKPSPEEAQLWAEAFDELLASKYGLAAFRAFLKSEFCEENIEFWLACE 383
+ SPEEA W E+FD+LL+ K GL F FLK+EF EENIEFW+ACE
Sbjct: 61 TPSTRSGQLAKETRVSPEEAIKWGESFDKLLSHKDGLETFTRFLKTEFSEENIEFWIACE 120
Query: 384 DFKKTKSPQKLSSKARKIYTDFIEKEAPKEINIDFQTKTLIAQNIQEATSGCFTTAQKRV 563
DFKK+K PQ++ KA+ IY FI+ +AP+E+N+DF TK +I+++I + T F AQ RV
Sbjct: 121 DFKKSKDPQQIIRKAKAIYEKFIQNDAPQEVNLDFHTKEIISKSITQPTLQSFDVAQSRV 180
Query: 564 YSLMENNSYPRFLESEFYQDLCRKPPQITT 653
Y LME +SY RFL+S+ Y DL + Q T
Sbjct: 181 YQLMEQDSYMRFLKSDIYLDLTKGRSQRPT 210
>ref|NP_001029879.1| regulator of G-protein signaling 5 [Bos taurus].
Length = 181
Score = 157 bits (398), Expect = 2e-38
Identities = 71/130 (54%), Positives = 99/130 (76%)
Frame = +3
Query: 243 KPSPEEAQLWAEAFDELLASKYGLAAFRAFLKSEFCEENIEFWLACEDFKKTKSPQKLSS 422
KPS +EA W ++ D+LL + YGLA+F++FLKSEF EEN+EFW+ACED+KK KSP K++
Sbjct: 52 KPSLDEALQWRDSLDKLLQNNYGLASFKSFLKSEFSEENLEFWMACEDYKKIKSPVKMAE 111
Query: 423 KARKIYTDFIEKEAPKEINIDFQTKTLIAQNIQEATSGCFTTAQKRVYSLMENNSYPRFL 602
A+KIY +FI+ EAPKE+NID TK + +N+ E + F AQKR+++LME +S PRF+
Sbjct: 112 TAKKIYEEFIQVEAPKEVNIDHFTKEITVKNLVEPSPSSFDVAQKRIHALMEKDSLPRFV 171
Query: 603 ESEFYQDLCR 632
SEFYQ+ +
Sbjct: 172 RSEFYQEFIK 181
>ref|NP_776875.1| regulator of G-protein signaling 16 [Bos taurus].
Length = 202
Score = 151 bits (381), Expect = 1e-36
Identities = 73/138 (52%), Positives = 99/138 (71%)
Frame = +3
Query: 255 EEAQLWAEAFDELLASKYGLAAFRAFLKSEFCEENIEFWLACEDFKKTKSPQKLSSKARK 434
E+ W E+FD LL+SK G+AAF AFLK+EF EEN+EFWLACE+FKK +S KL S+A +
Sbjct: 57 EDVLGWKESFDLLLSSKNGVAAFHAFLKTEFSEENLEFWLACEEFKKLRSATKLGSRAHR 116
Query: 435 IYTDFIEKEAPKEINIDFQTKTLIAQNIQEATSGCFTTAQKRVYSLMENNSYPRFLESEF 614
I+ +FI EAPKE+NID +T+ L N+Q AT+ CF AQ +V +LME +SYPRFL+S
Sbjct: 117 IFEEFICSEAPKEVNIDHETRELTRTNLQAATAVCFDAAQWKVRALMEKDSYPRFLKSPA 176
Query: 615 YQDLCRKPPQITTEPHAT 668
Y+DL + + P ++
Sbjct: 177 YRDLATQATAASASPSSS 194
>ref|NP_001040065.1| regulator of G-protein signaling 4 [Bos taurus].
Length = 205
Score = 148 bits (373), Expect = 1e-35
Identities = 74/161 (45%), Positives = 105/161 (65%), Gaps = 1/161 (0%)
Frame = +3
Query: 147 KDWKTRLSYFLQNXXXXXXXXXXXXXXXQTFI-KPSPEEAQLWAEAFDELLASKYGLAAF 323
KD K RL + LQ + S EE + WAE+ + L++ + GLAAF
Sbjct: 17 KDMKHRLGFLLQKSDSCEHNSSHSKKDKVVICQRVSHEEVKKWAESLENLISHECGLAAF 76
Query: 324 RAFLKSEFCEENIEFWLACEDFKKTKSPQKLSSKARKIYTDFIEKEAPKEINIDFQTKTL 503
+AFLKSE+ EENI+FW++CE++KK KSP KLS KA+KIY +FI +A KE+N+D T+
Sbjct: 77 KAFLKSEYSEENIDFWISCEEYKKIKSPSKLSPKAKKIYNEFISVQATKEVNLDSCTREE 136
Query: 504 IAQNIQEATSGCFTTAQKRVYSLMENNSYPRFLESEFYQDL 626
++N+ E T CF AQ+++++LME +SY RFL+S FY DL
Sbjct: 137 TSRNMLEPTITCFDEAQRKIFNLMEKDSYRRFLKSRFYLDL 177
Database: RefSeq49_BP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 17,681,374
Number of sequences in database: 33,088
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33088
Number of Hits to DB: 47,978,901
Number of extensions: 1219073
Number of successful extensions: 3878
Number of sequences better than 1.0e-05: 37
Number of HSP's gapped: 3852
Number of HSP's successfully gapped: 37
Length of query: 449
Length of database: 17,681,374
Length adjustment: 105
Effective length of query: 344
Effective length of database: 14,207,134
Effective search space: 4887254096
Effective search space used: 4887254096
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to RefSeqSP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-013451
(1348 letters)
Database: RefSeq49_SP.fasta
24,897 sequences; 11,343,932 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001038065.1| regulator of G-protein signaling 2 [Sus scro... 399 e-111
Alignment gi|XP_003130531.1| PREDICTED: regulator of G-protein signaling ... 166 4e-41
Alignment gi|XP_003357620.1| PREDICTED: regulator of G-protein signaling ... 163 2e-40
Alignment gi|XP_003357619.1| PREDICTED: regulator of G-protein signaling ... 163 2e-40
Alignment gi|NP_999521.1| regulator of G-protein signaling 5 [Sus scrofa]. 162 4e-40
Alignment gi|NP_001230822.1| regulator of G-protein signaling 18 [Sus scr... 159 3e-39
Alignment gi|NP_001172113.1| regulator of G-protein signaling 4 [Sus scro... 146 2e-35
Alignment gi|NP_001106488.1| regulator of G-protein signaling 16 [Sus scr... 146 2e-35
Alignment gi|XP_003357665.1| PREDICTED: regulator of G-protein signaling ... 134 2e-31
Alignment gi|XP_001927312.2| PREDICTED: regulator of G-protein signaling ... 123 2e-28
>ref|NP_001038065.1| regulator of G-protein signaling 2 [Sus scrofa].
Length = 212
Score = 399 bits (1025), Expect = e-111
Identities = 197/212 (92%), Positives = 197/212 (92%)
Frame = +3
Query: 33 MQSAMFLTVHHDCGPMDKSAGTGPKSEEKREKMKRTLLKDWKTRLSYFLQNXXXXXXXXX 212
MQSAMFLTVHHDCGPMDKSAGTGPKSEEKREKMKRTLLKDWKTRLSYFLQN
Sbjct: 1 MQSAMFLTVHHDCGPMDKSAGTGPKSEEKREKMKRTLLKDWKTRLSYFLQNSSSPGKPKT 60
Query: 213 XXXXXXQTFIKPSPEEAQLWAEAFDELLASKYGLAAFRAFLKSEFCEENIEFWLACEDFK 392
QTFIKPSPEEAQLWAEAFDELLASKYGLAAFRAFLKSEFCEENIEFWLACEDFK
Sbjct: 61 GKKSKPQTFIKPSPEEAQLWAEAFDELLASKYGLAAFRAFLKSEFCEENIEFWLACEDFK 120
Query: 393 KTKSPQKLSSKARKIYTDFIEKEAPKEINIDFQTKTLIAQNIQEATSGCFTTAQKRVYSL 572
KTKSPQKLSSKARKIYTDFIEKEAPKEINIDFQTKTLIAQNIQEATSGCFTTAQKRVYSL
Sbjct: 121 KTKSPQKLSSKARKIYTDFIEKEAPKEINIDFQTKTLIAQNIQEATSGCFTTAQKRVYSL 180
Query: 573 MENNSYPRFLESEFYQDLCRKPPQITTEPHAT 668
MENNSYPRFLESEFYQDLCRKPPQITTEPHAT
Sbjct: 181 MENNSYPRFLESEFYQDLCRKPPQITTEPHAT 212
>ref|XP_003130531.1| PREDICTED: regulator of G-protein signaling 21-like [Sus scrofa].
Length = 152
Score = 166 bits (419), Expect = 4e-41
Identities = 79/130 (60%), Positives = 100/130 (76%)
Frame = +3
Query: 237 FIKPSPEEAQLWAEAFDELLASKYGLAAFRAFLKSEFCEENIEFWLACEDFKKTKSPQKL 416
F + P E W+E D LL+++ GL AFR FLKSEF EEN+EFWLACEDFKKT+S +KL
Sbjct: 7 FHRSPPTETMAWSENMDTLLSNQAGLDAFRTFLKSEFSEENVEFWLACEDFKKTESAEKL 66
Query: 417 SSKARKIYTDFIEKEAPKEINIDFQTKTLIAQNIQEATSGCFTTAQKRVYSLMENNSYPR 596
SKA+ IY++FIE +APKEINIDF T+ LI++NI E T CF AQK +YSLM +S+PR
Sbjct: 67 VSKAKVIYSEFIEADAPKEINIDFSTRDLISKNIAEPTRKCFDEAQKLIYSLMAKDSFPR 126
Query: 597 FLESEFYQDL 626
FL+SE Y++L
Sbjct: 127 FLKSEIYKEL 136
>ref|XP_003357620.1| PREDICTED: regulator of G-protein signaling 8-like isoform 2 [Sus
scrofa].
Length = 180
Score = 163 bits (413), Expect = 2e-40
Identities = 76/126 (60%), Positives = 100/126 (79%)
Frame = +3
Query: 249 SPEEAQLWAEAFDELLASKYGLAAFRAFLKSEFCEENIEFWLACEDFKKTKSPQKLSSKA 428
S EEA WA++FD LL+ KYG+AAFRAFLK+EF EEN+EFWLACE+FKKT+S KL SKA
Sbjct: 46 STEEATRWADSFDVLLSHKYGVAAFRAFLKTEFSEENLEFWLACEEFKKTRSTAKLVSKA 105
Query: 429 RKIYTDFIEKEAPKEINIDFQTKTLIAQNIQEATSGCFTTAQKRVYSLMENNSYPRFLES 608
+I+ +F++ +AP+E+NIDFQT+ +N+QE + CF AQ +V+SLME +SYPRFL S
Sbjct: 106 HRIFEEFVDVQAPREVNIDFQTREATRKNMQEPSLTCFDQAQGKVHSLMEKDSYPRFLRS 165
Query: 609 EFYQDL 626
+ Y DL
Sbjct: 166 KMYLDL 171
>ref|XP_003357619.1| PREDICTED: regulator of G-protein signaling 8-like isoform 1 [Sus
scrofa].
Length = 180
Score = 163 bits (413), Expect = 2e-40
Identities = 76/126 (60%), Positives = 100/126 (79%)
Frame = +3
Query: 249 SPEEAQLWAEAFDELLASKYGLAAFRAFLKSEFCEENIEFWLACEDFKKTKSPQKLSSKA 428
S EEA WA++FD LL+ KYG+AAFRAFLK+EF EEN+EFWLACE+FKKT+S KL SKA
Sbjct: 46 STEEATRWADSFDVLLSHKYGVAAFRAFLKTEFSEENLEFWLACEEFKKTRSTAKLVSKA 105
Query: 429 RKIYTDFIEKEAPKEINIDFQTKTLIAQNIQEATSGCFTTAQKRVYSLMENNSYPRFLES 608
+I+ +F++ +AP+E+NIDFQT+ +N+QE + CF AQ +V+SLME +SYPRFL S
Sbjct: 106 HRIFEEFVDVQAPREVNIDFQTREATRKNMQEPSLTCFDQAQGKVHSLMEKDSYPRFLRS 165
Query: 609 EFYQDL 626
+ Y DL
Sbjct: 166 KMYLDL 171
>ref|NP_999521.1| regulator of G-protein signaling 5 [Sus scrofa].
Length = 181
Score = 162 bits (410), Expect = 4e-40
Identities = 73/130 (56%), Positives = 100/130 (76%)
Frame = +3
Query: 243 KPSPEEAQLWAEAFDELLASKYGLAAFRAFLKSEFCEENIEFWLACEDFKKTKSPQKLSS 422
KPS +EA W ++ D+LL + YGLA+F++FLKSEF EEN+EFW+ACED+KK KSP K++
Sbjct: 52 KPSLDEALQWRDSLDKLLQNNYGLASFKSFLKSEFSEENLEFWMACEDYKKIKSPVKMAE 111
Query: 423 KARKIYTDFIEKEAPKEINIDFQTKTLIAQNIQEATSGCFTTAQKRVYSLMENNSYPRFL 602
KA+KIY +FI+ EAPKE+NID TK + +N+ E + F AQKR+Y+LME +S PRF+
Sbjct: 112 KAKKIYEEFIQSEAPKEVNIDHFTKEITMKNLVEPSPSSFDVAQKRIYALMEKDSLPRFV 171
Query: 603 ESEFYQDLCR 632
SEFYQ+ +
Sbjct: 172 RSEFYQEFIK 181
>ref|NP_001230822.1| regulator of G-protein signaling 18 [Sus scrofa].
Length = 235
Score = 159 bits (403), Expect = 3e-39
Identities = 84/208 (40%), Positives = 123/208 (59%), Gaps = 5/208 (2%)
Frame = +3
Query: 45 MFLTVHHDCGPMDKSA-----GTGPKSEEKREKMKRTLLKDWKTRLSYFLQNXXXXXXXX 209
+F + + C P +K+ G+G + K +++ K+ + RLS LQ
Sbjct: 6 LFFSQLNMCEPKEKTFFKLIHGSGKEETSKEARIRD---KEKRNRLSLLLQKPEFHDDTP 62
Query: 210 XXXXXXXQTFIKPSPEEAQLWAEAFDELLASKYGLAAFRAFLKSEFCEENIEFWLACEDF 389
+ SPEEA +W E+FD+LL+ K GL F FLK+EF +ENI FW+ACED+
Sbjct: 63 SSSSEHLAKKTRISPEEAMIWGESFDKLLSQKDGLETFTRFLKTEFSDENIAFWIACEDY 122
Query: 390 KKTKSPQKLSSKARKIYTDFIEKEAPKEINIDFQTKTLIAQNIQEATSGCFTTAQKRVYS 569
KK+K PQ++ KA+ IY FI+ +AP+E+N+DF TK ++A++I + T F AQ RVY
Sbjct: 123 KKSKDPQQIIRKAKAIYETFIQTDAPQEVNLDFHTKEILAKSITQPTLHSFDAAQSRVYQ 182
Query: 570 LMENNSYPRFLESEFYQDLCRKPPQITT 653
LME +SY RFL+S+ Y DL P+ T
Sbjct: 183 LMEQDSYTRFLKSDIYLDLIEGRPRRRT 210
>ref|NP_001172113.1| regulator of G-protein signaling 4 [Sus scrofa].
Length = 205
Score = 146 bits (369), Expect = 2e-35
Identities = 73/161 (45%), Positives = 104/161 (64%), Gaps = 1/161 (0%)
Frame = +3
Query: 147 KDWKTRLSYFLQNXXXXXXXXXXXXXXXQTFI-KPSPEEAQLWAEAFDELLASKYGLAAF 323
KD K RL + LQ + S EE + WAE+ + L++ + GLAAF
Sbjct: 17 KDMKHRLGFLLQKSDSCEHSSSHSKKDKVVICQRVSQEEVKKWAESLENLISHECGLAAF 76
Query: 324 RAFLKSEFCEENIEFWLACEDFKKTKSPQKLSSKARKIYTDFIEKEAPKEINIDFQTKTL 503
+AFLKSE+ EENI+FW++CE++KK KSP KLS +A+KIY +FI + KE+N+D T+
Sbjct: 77 KAFLKSEYSEENIDFWISCEEYKKIKSPSKLSPRAKKIYNEFISVQQTKEVNLDSCTREE 136
Query: 504 IAQNIQEATSGCFTTAQKRVYSLMENNSYPRFLESEFYQDL 626
++N+ E T CF AQK++++LME +SY RFL+S FY DL
Sbjct: 137 TSRNMLEPTITCFDEAQKKIFNLMEKDSYRRFLKSRFYLDL 177
>ref|NP_001106488.1| regulator of G-protein signaling 16 [Sus scrofa].
Length = 202
Score = 146 bits (369), Expect = 2e-35
Identities = 68/124 (54%), Positives = 93/124 (75%)
Frame = +3
Query: 255 EEAQLWAEAFDELLASKYGLAAFRAFLKSEFCEENIEFWLACEDFKKTKSPQKLSSKARK 434
E+ W E+FD LL+SK G+AAF FLK+EF EEN+EFWLACE+FKK +S KL+S+A +
Sbjct: 57 EDVLGWRESFDLLLSSKNGVAAFHTFLKTEFSEENLEFWLACEEFKKLRSATKLASRAHR 116
Query: 435 IYTDFIEKEAPKEINIDFQTKTLIAQNIQEATSGCFTTAQKRVYSLMENNSYPRFLESEF 614
I+ +FI EAPKE+N+D +T+ L N+Q A++ CF AQ + +LME +SYPRFL+S
Sbjct: 117 IFEEFIRSEAPKEVNLDHETRELTRTNLQAASATCFDVAQGKTRTLMEKDSYPRFLKSPA 176
Query: 615 YQDL 626
Y+DL
Sbjct: 177 YRDL 180
>ref|XP_003357665.1| PREDICTED: regulator of G-protein signaling 1 [Sus scrofa].
Length = 209
Score = 134 bits (336), Expect = 2e-31
Identities = 66/126 (52%), Positives = 89/126 (70%)
Frame = +3
Query: 249 SPEEAQLWAEAFDELLASKYGLAAFRAFLKSEFCEENIEFWLACEDFKKTKSPQKLSSKA 428
S +E W+++ ++LLA++ G F FLKSEF EENIEFWLACED+KKT+S L KA
Sbjct: 75 SADEVMQWSQSLEKLLANQTGQDVFGNFLKSEFSEENIEFWLACEDYKKTES-DLLHRKA 133
Query: 429 RKIYTDFIEKEAPKEINIDFQTKTLIAQNIQEATSGCFTTAQKRVYSLMENNSYPRFLES 608
+IY F++ +A K+INIDF T+ A+ I+ AT CF AQK +Y+LME +SYPRFL+S
Sbjct: 134 EQIYKAFVQSDAAKQINIDFHTREATARKIKAATPTCFDEAQKIIYTLMEKDSYPRFLKS 193
Query: 609 EFYQDL 626
Y +L
Sbjct: 194 NIYLNL 199
>ref|XP_001927312.2| PREDICTED: regulator of G-protein signaling 20-like [Sus scrofa].
Length = 242
Score = 123 bits (309), Expect = 2e-28
Identities = 58/129 (44%), Positives = 86/129 (66%)
Frame = +3
Query: 246 PSPEEAQLWAEAFDELLASKYGLAAFRAFLKSEFCEENIEFWLACEDFKKTKSPQKLSSK 425
P+ EEA WA +F++L+ + G AFR FL++EF EEN+ FW+ACE+ KK + + K
Sbjct: 105 PTLEEASAWARSFEQLMLTAAGRNAFREFLRTEFSEENLLFWMACEELKKEANKTIIEEK 164
Query: 426 ARKIYTDFIEKEAPKEINIDFQTKTLIAQNIQEATSGCFTTAQKRVYSLMENNSYPRFLE 605
AR IY D+I +PKE+++D + + LI +N+ E + F AQ ++Y+LM +SYPRFL
Sbjct: 165 ARIIYEDYISILSPKEVSLDSRVRELIDRNMAEPSPHIFDDAQLQIYTLMHRDSYPRFLS 224
Query: 606 SEFYQDLCR 632
S Y+DL R
Sbjct: 225 STLYKDLLR 233
Database: RefSeq49_SP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 11,343,932
Number of sequences in database: 24,897
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 24897
Number of Hits to DB: 31,118,684
Number of extensions: 825049
Number of successful extensions: 2386
Number of sequences better than 1.0e-05: 19
Number of HSP's gapped: 2376
Number of HSP's successfully gapped: 19
Length of query: 449
Length of database: 11,343,932
Length adjustment: 102
Effective length of query: 347
Effective length of database: 8,804,438
Effective search space: 3055139986
Effective search space used: 3055139986
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to RefSeqMP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-013451
(1348 letters)
Database: RefSeq49_MP.fasta
30,036 sequences; 15,617,559 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_033087.2| regulator of G-protein signaling 2 [Mus musculu... 376 e-104
Alignment gi|NP_599018.3| regulator of G-protein signaling 3 isoform 2 [M... 164 1e-40
Alignment gi|NP_080656.2| regulator of G-protein signaling 8 [Mus musculu... 163 3e-40
Alignment gi|NP_075019.1| regulator of G-protein signaling 18 [Mus muscul... 162 7e-40
Alignment gi|XP_894544.3| PREDICTED: regulator of G-protein signaling 21-... 156 3e-38
Alignment gi|XP_921002.3| PREDICTED: regulator of G-protein signaling 21-... 156 3e-38
Alignment gi|NP_033089.2| regulator of G-protein signaling 5 [Mus musculu... 154 1e-37
Alignment gi|NP_035397.2| regulator of G-protein signaling 16 [Mus muscul... 149 4e-36
Alignment gi|NP_033088.2| regulator of G-protein signaling 4 [Mus musculu... 148 1e-35
Alignment gi|NP_056626.2| regulator of G-protein signaling 1 [Mus musculu... 128 9e-30
>ref|NP_033087.2| regulator of G-protein signaling 2 [Mus musculus].
Length = 211
Score = 376 bits (966), Expect = e-104
Identities = 189/212 (89%), Positives = 191/212 (90%)
Frame = +3
Query: 33 MQSAMFLTVHHDCGPMDKSAGTGPKSEEKREKMKRTLLKDWKTRLSYFLQNXXXXXXXXX 212
MQSAMFL V HDC PMDKSAG GPK EEKREKMKRTLLKDWKTRLSYFLQN
Sbjct: 1 MQSAMFLAVQHDCVPMDKSAGNGPKVEEKREKMKRTLLKDWKTRLSYFLQNSSAPGKPKT 60
Query: 213 XXXXXXQTFIKPSPEEAQLWAEAFDELLASKYGLAAFRAFLKSEFCEENIEFWLACEDFK 392
QTFIKPSPEEAQLWAEAFDELLASKYGLAAFRAFLKSEFCEENIEFWLACEDFK
Sbjct: 61 GKKSKQQTFIKPSPEEAQLWAEAFDELLASKYGLAAFRAFLKSEFCEENIEFWLACEDFK 120
Query: 393 KTKSPQKLSSKARKIYTDFIEKEAPKEINIDFQTKTLIAQNIQEATSGCFTTAQKRVYSL 572
KTKSPQKLSSKARKIYTDFIEKEAPKEINIDFQTK+LIAQNIQEATSGCFTTAQKRVYSL
Sbjct: 121 KTKSPQKLSSKARKIYTDFIEKEAPKEINIDFQTKSLIAQNIQEATSGCFTTAQKRVYSL 180
Query: 573 MENNSYPRFLESEFYQDLCRKPPQITTEPHAT 668
MENNSYPRFLESEFYQDLC+K PQITTEPHAT
Sbjct: 181 MENNSYPRFLESEFYQDLCKK-PQITTEPHAT 211
>ref|NP_599018.3| regulator of G-protein signaling 3 isoform 2 [Mus musculus].
Length = 966
Score = 164 bits (416), Expect = 1e-40
Identities = 78/172 (45%), Positives = 110/172 (63%)
Frame = +3
Query: 111 EEKREKMKRTLLKDWKTRLSYFLQNXXXXXXXXXXXXXXXQTFIKPSPEEAQLWAEAFDE 290
E R++ + + KD K +L+ F + KP+ EEA W+E+ ++
Sbjct: 785 EASRKRKSKNIAKDMKNKLAIFRRRNESPGAQPASKTDKTTKSFKPTSEEALKWSESLEK 844
Query: 291 LLASKYGLAAFRAFLKSEFCEENIEFWLACEDFKKTKSPQKLSSKARKIYTDFIEKEAPK 470
LL KYGL F+AFL++EF EEN+EFWLACEDFKK KS K+++KA+KI+ +FI +A K
Sbjct: 845 LLLHKYGLEVFQAFLRTEFSEENLEFWLACEDFKKVKSQSKMAAKAKKIFAEFIAIQACK 904
Query: 471 EINIDFQTKTLIAQNIQEATSGCFTTAQKRVYSLMENNSYPRFLESEFYQDL 626
E+N+D T+ +N+Q T GCF AQKR++ LME +SYPRFL S+ Y DL
Sbjct: 905 EVNLDSYTREHTKENLQSITRGCFDLAQKRIFGLMEKDSYPRFLRSDLYLDL 956
>ref|NP_080656.2| regulator of G-protein signaling 8 [Mus musculus].
Length = 180
Score = 163 bits (413), Expect = 3e-40
Identities = 76/126 (60%), Positives = 100/126 (79%)
Frame = +3
Query: 249 SPEEAQLWAEAFDELLASKYGLAAFRAFLKSEFCEENIEFWLACEDFKKTKSPQKLSSKA 428
S EEA WAE+FD LL+ KYG+AAFRAFLK+EF EEN+EFWLACE+FKKT+S KL +KA
Sbjct: 46 STEEATRWAESFDVLLSHKYGVAAFRAFLKTEFSEENLEFWLACEEFKKTRSTAKLVTKA 105
Query: 429 RKIYTDFIEKEAPKEINIDFQTKTLIAQNIQEATSGCFTTAQKRVYSLMENNSYPRFLES 608
+I+ +F++ +AP+E+NIDFQT+ +N+QE + CF AQ +V+SLME +SYPRFL S
Sbjct: 106 HRIFEEFVDVQAPREVNIDFQTREATRKNMQEPSLTCFDQAQGKVHSLMEKDSYPRFLRS 165
Query: 609 EFYQDL 626
+ Y DL
Sbjct: 166 KMYLDL 171
>ref|NP_075019.1| regulator of G-protein signaling 18 [Mus musculus].
Length = 235
Score = 162 bits (409), Expect = 7e-40
Identities = 88/187 (47%), Positives = 115/187 (61%)
Frame = +3
Query: 93 GTGPKSEEKREKMKRTLLKDWKTRLSYFLQNXXXXXXXXXXXXXXXQTFIKPSPEEAQLW 272
G+G + K++ K+ + RLS LQ + SPEEA W
Sbjct: 27 GSGKEETSIEAKIRA---KEKRNRLSLLLQRPDFHGETQASRSALLAKETRVSPEEAVKW 83
Query: 273 AEAFDELLASKYGLAAFRAFLKSEFCEENIEFWLACEDFKKTKSPQKLSSKARKIYTDFI 452
AE+FD+LL+ + G+ AF FLK+EF EENIEFW+ACEDFKK K PQ++ KA+ IY FI
Sbjct: 84 AESFDKLLSHRDGVDAFTRFLKTEFSEENIEFWVACEDFKKCKEPQQIILKAKAIYEKFI 143
Query: 453 EKEAPKEINIDFQTKTLIAQNIQEATSGCFTTAQKRVYSLMENNSYPRFLESEFYQDLCR 632
+ +APKE+NIDF TK +IA++I + T F TAQ RVY LME++SY RFL+SE Y L
Sbjct: 144 QNDAPKEVNIDFHTKEVIAKSIAQPTLHSFDTAQSRVYQLMEHDSYKRFLKSETYLHLIE 203
Query: 633 KPPQITT 653
PQ T
Sbjct: 204 GRPQRPT 210
>ref|XP_894544.3| PREDICTED: regulator of G-protein signaling 21-like [Mus musculus].
Length = 152
Score = 156 bits (395), Expect = 3e-38
Identities = 74/130 (56%), Positives = 97/130 (74%)
Frame = +3
Query: 237 FIKPSPEEAQLWAEAFDELLASKYGLAAFRAFLKSEFCEENIEFWLACEDFKKTKSPQKL 416
F + E W+E D LLA++ GL AFR FLKSE+ EEN+EFWLACEDFKKT+ +K+
Sbjct: 7 FYRSPTTETLAWSENMDSLLANQAGLDAFRTFLKSEYSEENVEFWLACEDFKKTECREKI 66
Query: 417 SSKARKIYTDFIEKEAPKEINIDFQTKTLIAQNIQEATSGCFTTAQKRVYSLMENNSYPR 596
++KA+ IY++FI +APKEINIDF T+ LI++NI E T CF AQK +YSLM +S+PR
Sbjct: 67 ATKAKTIYSEFIVADAPKEINIDFSTRDLISRNIAEPTPKCFDEAQKLIYSLMAKDSFPR 126
Query: 597 FLESEFYQDL 626
FL+SE Y+ L
Sbjct: 127 FLKSEIYKKL 136
>ref|XP_921002.3| PREDICTED: regulator of G-protein signaling 21-like [Mus musculus].
Length = 152
Score = 156 bits (395), Expect = 3e-38
Identities = 74/130 (56%), Positives = 97/130 (74%)
Frame = +3
Query: 237 FIKPSPEEAQLWAEAFDELLASKYGLAAFRAFLKSEFCEENIEFWLACEDFKKTKSPQKL 416
F + E W+E D LLA++ GL AFR FLKSE+ EEN+EFWLACEDFKKT+ +K+
Sbjct: 7 FYRSPTTETLAWSENMDSLLANQAGLDAFRTFLKSEYSEENVEFWLACEDFKKTECREKI 66
Query: 417 SSKARKIYTDFIEKEAPKEINIDFQTKTLIAQNIQEATSGCFTTAQKRVYSLMENNSYPR 596
++KA+ IY++FI +APKEINIDF T+ LI++NI E T CF AQK +YSLM +S+PR
Sbjct: 67 ATKAKTIYSEFIVADAPKEINIDFSTRDLISRNIAEPTPKCFDEAQKLIYSLMAKDSFPR 126
Query: 597 FLESEFYQDL 626
FL+SE Y+ L
Sbjct: 127 FLKSEIYKKL 136
>ref|NP_033089.2| regulator of G-protein signaling 5 [Mus musculus].
Length = 181
Score = 154 bits (390), Expect = 1e-37
Identities = 70/130 (53%), Positives = 99/130 (76%)
Frame = +3
Query: 243 KPSPEEAQLWAEAFDELLASKYGLAAFRAFLKSEFCEENIEFWLACEDFKKTKSPQKLSS 422
KPS EE W ++ D+LL + YG A+F++FLKSEF EEN+EFW+ACE++KK KSP K++
Sbjct: 52 KPSLEEVLQWRQSLDKLLQNSYGFASFKSFLKSEFSEENLEFWVACENYKKIKSPIKMAE 111
Query: 423 KARKIYTDFIEKEAPKEINIDFQTKTLIAQNIQEATSGCFTTAQKRVYSLMENNSYPRFL 602
KA++IY +FI+ EAPKE+NID TK + +N+ E + F AQKR+Y+LME +S PRF+
Sbjct: 112 KAKQIYEEFIQTEAPKEVNIDHFTKDITMKNLVEPSPRSFDLAQKRIYALMEKDSLPRFV 171
Query: 603 ESEFYQDLCR 632
SEFY++L +
Sbjct: 172 RSEFYKELIK 181
>ref|NP_035397.2| regulator of G-protein signaling 16 [Mus musculus].
Length = 201
Score = 149 bits (377), Expect = 4e-36
Identities = 75/146 (51%), Positives = 100/146 (68%)
Frame = +3
Query: 255 EEAQLWAEAFDELLASKYGLAAFRAFLKSEFCEENIEFWLACEDFKKTKSPQKLSSKARK 434
E+ W E+FD LL SK G+AAF AFLK+EF EEN+EFWLACE+FKK +S KL+S+A
Sbjct: 56 EDVLGWRESFDLLLNSKNGVAAFHAFLKTEFSEENLEFWLACEEFKKIRSATKLASRAHH 115
Query: 435 IYTDFIEKEAPKEINIDFQTKTLIAQNIQEATSGCFTTAQKRVYSLMENNSYPRFLESEF 614
I+ ++I EAPKE+NID +T+ L N+Q AT+ CF AQ + +LME +SYPRFL+S
Sbjct: 116 IFDEYIRSEAPKEVNIDHETRELTKTNLQAATTSCFDVAQGKTRTLMEKDSYPRFLKSPA 175
Query: 615 YQDLCRKPPQITTEPHAT*DGNGSPA 692
Y+DL + +T +GSPA
Sbjct: 176 YRDLAAQASATSTSA-----PSGSPA 196
>ref|NP_033088.2| regulator of G-protein signaling 4 [Mus musculus].
Length = 205
Score = 148 bits (373), Expect = 1e-35
Identities = 75/161 (46%), Positives = 106/161 (65%), Gaps = 1/161 (0%)
Frame = +3
Query: 147 KDWKTRLSYFLQ-NXXXXXXXXXXXXXXXQTFIKPSPEEAQLWAEAFDELLASKYGLAAF 323
KD K RL + LQ + T + S EE + WAE+ + L+ + GLAAF
Sbjct: 17 KDMKHRLGFLLQKSDSCEHSSSHSKKDKVVTCQRVSQEEVKKWAESLENLIHHECGLAAF 76
Query: 324 RAFLKSEFCEENIEFWLACEDFKKTKSPQKLSSKARKIYTDFIEKEAPKEINIDFQTKTL 503
+AFLKSE+ EENI+FW++CE++KK KSP KLS KA+KIY +FI +A KE+N+D T+
Sbjct: 77 KAFLKSEYSEENIDFWISCEEYKKIKSPSKLSPKAKKIYNEFISVQATKEVNLDSCTREE 136
Query: 504 IAQNIQEATSGCFTTAQKRVYSLMENNSYPRFLESEFYQDL 626
++N+ + T CF AQK++++LME +SY RFL+S FY DL
Sbjct: 137 TSRNMLQPTITCFDEAQKKIFNLMEKDSYRRFLKSRFYLDL 177
>ref|NP_056626.2| regulator of G-protein signaling 1 [Mus musculus].
Length = 209
Score = 128 bits (322), Expect = 9e-30
Identities = 65/126 (51%), Positives = 86/126 (68%)
Frame = +3
Query: 249 SPEEAQLWAEAFDELLASKYGLAAFRAFLKSEFCEENIEFWLACEDFKKTKSPQKLSSKA 428
S EE W+++ ++LLA++ G F FLKSEF EENIEFWLACED+KKT++ L +KA
Sbjct: 75 SAEEVMQWSQSLEKLLANQTGQNVFGRFLKSEFSEENIEFWLACEDYKKTET-DLLHNKA 133
Query: 429 RKIYTDFIEKEAPKEINIDFQTKTLIAQNIQEATSGCFTTAQKRVYSLMENNSYPRFLES 608
IY F+ +A K+INIDF T+ A+ I+ T F AQK +YSLME +SYPRFL+S
Sbjct: 134 ENIYKAFVHSDAVKQINIDFHTRESTAKKIKTPTPTSFDEAQKVIYSLMEKDSYPRFLKS 193
Query: 609 EFYQDL 626
Y +L
Sbjct: 194 NIYLNL 199
Database: RefSeq49_MP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 15,617,559
Number of sequences in database: 30,036
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 30036
Number of Hits to DB: 41,819,649
Number of extensions: 1032091
Number of successful extensions: 3195
Number of sequences better than 1.0e-05: 29
Number of HSP's gapped: 3178
Number of HSP's successfully gapped: 29
Length of query: 449
Length of database: 15,617,559
Length adjustment: 105
Effective length of query: 344
Effective length of database: 12,463,779
Effective search space: 4287539976
Effective search space used: 4287539976
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to RefSeqHP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-013451
(1348 letters)
Database: RefSeq49_HP.fasta
32,964 sequences; 18,297,164 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_002914.1| regulator of G-protein signaling 2 [Homo sapien... 374 e-104
Alignment gi|NP_652759.3| regulator of G-protein signaling 3 isoform 6 [H... 170 2e-42
Alignment gi|NP_066929.1| regulator of G-protein signaling 3 isoform 2 [H... 170 2e-42
Alignment gi|NP_570613.2| regulator of G-protein signaling 3 isoform 1 [H... 170 2e-42
Alignment gi|NP_203131.1| regulator of G-protein signaling 8 isoform 1 [H... 164 2e-40
Alignment gi|NP_001095920.1| regulator of G-protein signaling 8 isoform 2... 164 2e-40
Alignment gi|NP_652760.2| regulator of G-protein signaling 3 isoform 5 [H... 162 5e-40
Alignment gi|NP_570138.1| regulator of G-protein signaling 18 [Homo sapie... 162 7e-40
Alignment gi|NP_001034241.1| regulator of G-protein signaling 21 [Homo sa... 160 3e-39
Alignment gi|NP_602299.1| regulator of G-protein signaling 3 isoform 4 [H... 158 1e-38
>ref|NP_002914.1| regulator of G-protein signaling 2 [Homo sapiens].
Length = 211
Score = 374 bits (961), Expect = e-104
Identities = 188/212 (88%), Positives = 191/212 (90%)
Frame = +3
Query: 33 MQSAMFLTVHHDCGPMDKSAGTGPKSEEKREKMKRTLLKDWKTRLSYFLQNXXXXXXXXX 212
MQSAMFL V HDC PMDKSAG+G KSEEKREKMKRTLLKDWKTRLSYFLQN
Sbjct: 1 MQSAMFLAVQHDCRPMDKSAGSGHKSEEKREKMKRTLLKDWKTRLSYFLQNSSTPGKPKT 60
Query: 213 XXXXXXQTFIKPSPEEAQLWAEAFDELLASKYGLAAFRAFLKSEFCEENIEFWLACEDFK 392
Q FIKPSPEEAQLW+EAFDELLASKYGLAAFRAFLKSEFCEENIEFWLACEDFK
Sbjct: 61 GKKSKQQAFIKPSPEEAQLWSEAFDELLASKYGLAAFRAFLKSEFCEENIEFWLACEDFK 120
Query: 393 KTKSPQKLSSKARKIYTDFIEKEAPKEINIDFQTKTLIAQNIQEATSGCFTTAQKRVYSL 572
KTKSPQKLSSKARKIYTDFIEKEAPKEINIDFQTKTLIAQNIQEATSGCFTTAQKRVYSL
Sbjct: 121 KTKSPQKLSSKARKIYTDFIEKEAPKEINIDFQTKTLIAQNIQEATSGCFTTAQKRVYSL 180
Query: 573 MENNSYPRFLESEFYQDLCRKPPQITTEPHAT 668
MENNSYPRFLESEFYQDLC+K PQITTEPHAT
Sbjct: 181 MENNSYPRFLESEFYQDLCKK-PQITTEPHAT 211
>ref|NP_652759.3| regulator of G-protein signaling 3 isoform 6 [Homo sapiens].
Length = 1198
Score = 170 bits (431), Expect = 2e-42
Identities = 85/195 (43%), Positives = 115/195 (58%)
Frame = +3
Query: 42 AMFLTVHHDCGPMDKSAGTGPKSEEKREKMKRTLLKDWKTRLSYFLQNXXXXXXXXXXXX 221
++F T H D G E R++ + L KD K +L F +
Sbjct: 997 SLFFTGHRKMSGADT---VGDDDEASRKRKSKNLAKDMKNKLGIFRRRNESPGAPPAGKA 1053
Query: 222 XXXQTFIKPSPEEAQLWAEAFDELLASKYGLAAFRAFLKSEFCEENIEFWLACEDFKKTK 401
KP+ EEA W E+ ++LL KYGLA F+AFL++EF EEN+EFWLACEDFKK K
Sbjct: 1054 DKMMKSFKPTSEEALKWGESLEKLLVHKYGLAVFQAFLRTEFSEENLEFWLACEDFKKVK 1113
Query: 402 SPQKLSSKARKIYTDFIEKEAPKEINIDFQTKTLIAQNIQEATSGCFTTAQKRVYSLMEN 581
S K++SKA+KI+ ++I +A KE+N+D T+ N+Q T GCF AQKR++ LME
Sbjct: 1114 SQSKMASKAKKIFAEYIAIQACKEVNLDSYTREHTKDNLQSVTRGCFDLAQKRIFGLMEK 1173
Query: 582 NSYPRFLESEFYQDL 626
+SYPRFL S+ Y DL
Sbjct: 1174 DSYPRFLRSDLYLDL 1188
>ref|NP_066929.1| regulator of G-protein signaling 3 isoform 2 [Homo sapiens].
Length = 519
Score = 170 bits (431), Expect = 2e-42
Identities = 85/195 (43%), Positives = 115/195 (58%)
Frame = +3
Query: 42 AMFLTVHHDCGPMDKSAGTGPKSEEKREKMKRTLLKDWKTRLSYFLQNXXXXXXXXXXXX 221
++F T H D G E R++ + L KD K +L F +
Sbjct: 318 SLFFTGHRKMSGADT---VGDDDEASRKRKSKNLAKDMKNKLGIFRRRNESPGAPPAGKA 374
Query: 222 XXXQTFIKPSPEEAQLWAEAFDELLASKYGLAAFRAFLKSEFCEENIEFWLACEDFKKTK 401
KP+ EEA W E+ ++LL KYGLA F+AFL++EF EEN+EFWLACEDFKK K
Sbjct: 375 DKMMKSFKPTSEEALKWGESLEKLLVHKYGLAVFQAFLRTEFSEENLEFWLACEDFKKVK 434
Query: 402 SPQKLSSKARKIYTDFIEKEAPKEINIDFQTKTLIAQNIQEATSGCFTTAQKRVYSLMEN 581
S K++SKA+KI+ ++I +A KE+N+D T+ N+Q T GCF AQKR++ LME
Sbjct: 435 SQSKMASKAKKIFAEYIAIQACKEVNLDSYTREHTKDNLQSVTRGCFDLAQKRIFGLMEK 494
Query: 582 NSYPRFLESEFYQDL 626
+SYPRFL S+ Y DL
Sbjct: 495 DSYPRFLRSDLYLDL 509
>ref|NP_570613.2| regulator of G-protein signaling 3 isoform 1 [Homo sapiens].
Length = 917
Score = 170 bits (431), Expect = 2e-42
Identities = 85/195 (43%), Positives = 115/195 (58%)
Frame = +3
Query: 42 AMFLTVHHDCGPMDKSAGTGPKSEEKREKMKRTLLKDWKTRLSYFLQNXXXXXXXXXXXX 221
++F T H D G E R++ + L KD K +L F +
Sbjct: 716 SLFFTGHRKMSGADT---VGDDDEASRKRKSKNLAKDMKNKLGIFRRRNESPGAPPAGKA 772
Query: 222 XXXQTFIKPSPEEAQLWAEAFDELLASKYGLAAFRAFLKSEFCEENIEFWLACEDFKKTK 401
KP+ EEA W E+ ++LL KYGLA F+AFL++EF EEN+EFWLACEDFKK K
Sbjct: 773 DKMMKSFKPTSEEALKWGESLEKLLVHKYGLAVFQAFLRTEFSEENLEFWLACEDFKKVK 832
Query: 402 SPQKLSSKARKIYTDFIEKEAPKEINIDFQTKTLIAQNIQEATSGCFTTAQKRVYSLMEN 581
S K++SKA+KI+ ++I +A KE+N+D T+ N+Q T GCF AQKR++ LME
Sbjct: 833 SQSKMASKAKKIFAEYIAIQACKEVNLDSYTREHTKDNLQSVTRGCFDLAQKRIFGLMEK 892
Query: 582 NSYPRFLESEFYQDL 626
+SYPRFL S+ Y DL
Sbjct: 893 DSYPRFLRSDLYLDL 907
>ref|NP_203131.1| regulator of G-protein signaling 8 isoform 1 [Homo sapiens].
Length = 198
Score = 164 bits (414), Expect = 2e-40
Identities = 76/126 (60%), Positives = 100/126 (79%)
Frame = +3
Query: 249 SPEEAQLWAEAFDELLASKYGLAAFRAFLKSEFCEENIEFWLACEDFKKTKSPQKLSSKA 428
S EEA WA++FD LL+ KYG+AAFRAFLK+EF EEN+EFWLACE+FKKT+S KL SKA
Sbjct: 64 STEEATRWADSFDVLLSHKYGVAAFRAFLKTEFSEENLEFWLACEEFKKTRSTAKLVSKA 123
Query: 429 RKIYTDFIEKEAPKEINIDFQTKTLIAQNIQEATSGCFTTAQKRVYSLMENNSYPRFLES 608
+I+ +F++ +AP+E+NIDFQT+ +N+QE + CF AQ +V+SLME +SYPRFL S
Sbjct: 124 HRIFEEFVDVQAPREVNIDFQTREATRKNLQEPSLTCFDQAQGKVHSLMEKDSYPRFLRS 183
Query: 609 EFYQDL 626
+ Y DL
Sbjct: 184 KMYLDL 189
>ref|NP_001095920.1| regulator of G-protein signaling 8 isoform 2 [Homo sapiens].
Length = 180
Score = 164 bits (414), Expect = 2e-40
Identities = 76/126 (60%), Positives = 100/126 (79%)
Frame = +3
Query: 249 SPEEAQLWAEAFDELLASKYGLAAFRAFLKSEFCEENIEFWLACEDFKKTKSPQKLSSKA 428
S EEA WA++FD LL+ KYG+AAFRAFLK+EF EEN+EFWLACE+FKKT+S KL SKA
Sbjct: 46 STEEATRWADSFDVLLSHKYGVAAFRAFLKTEFSEENLEFWLACEEFKKTRSTAKLVSKA 105
Query: 429 RKIYTDFIEKEAPKEINIDFQTKTLIAQNIQEATSGCFTTAQKRVYSLMENNSYPRFLES 608
+I+ +F++ +AP+E+NIDFQT+ +N+QE + CF AQ +V+SLME +SYPRFL S
Sbjct: 106 HRIFEEFVDVQAPREVNIDFQTREATRKNLQEPSLTCFDQAQGKVHSLMEKDSYPRFLRS 165
Query: 609 EFYQDL 626
+ Y DL
Sbjct: 166 KMYLDL 171
>ref|NP_652760.2| regulator of G-protein signaling 3 isoform 5 [Homo sapiens].
Length = 311
Score = 162 bits (411), Expect = 5e-40
Identities = 80/171 (46%), Positives = 107/171 (62%)
Frame = +3
Query: 114 EKREKMKRTLLKDWKTRLSYFLQNXXXXXXXXXXXXXXXQTFIKPSPEEAQLWAEAFDEL 293
++R MK KD K +L F + KP+ EEA W E+ ++L
Sbjct: 133 QRRHTMKEA--KDMKNKLGIFRRRNESPGAPPAGKADKMMKSFKPTSEEALKWGESLEKL 190
Query: 294 LASKYGLAAFRAFLKSEFCEENIEFWLACEDFKKTKSPQKLSSKARKIYTDFIEKEAPKE 473
L KYGLA F+AFL++EF EEN+EFWLACEDFKK KS K++SKA+KI+ ++I +A KE
Sbjct: 191 LVHKYGLAVFQAFLRTEFSEENLEFWLACEDFKKVKSQSKMASKAKKIFAEYIAIQACKE 250
Query: 474 INIDFQTKTLIAQNIQEATSGCFTTAQKRVYSLMENNSYPRFLESEFYQDL 626
+N+D T+ N+Q T GCF AQKR++ LME +SYPRFL S+ Y DL
Sbjct: 251 VNLDSYTREHTKDNLQSVTRGCFDLAQKRIFGLMEKDSYPRFLRSDLYLDL 301
>ref|NP_570138.1| regulator of G-protein signaling 18 [Homo sapiens].
Length = 235
Score = 162 bits (410), Expect = 7e-40
Identities = 85/187 (45%), Positives = 113/187 (60%)
Frame = +3
Query: 93 GTGPKSEEKREKMKRTLLKDWKTRLSYFLQNXXXXXXXXXXXXXXXQTFIKPSPEEAQLW 272
G+G + K K++ K+ + RLS +Q + SPEEA W
Sbjct: 27 GSGKEETSKEAKIRA---KEKRNRLSLLVQKPEFHEDTRSSRSGHLAKETRVSPEEAVKW 83
Query: 273 AEAFDELLASKYGLAAFRAFLKSEFCEENIEFWLACEDFKKTKSPQKLSSKARKIYTDFI 452
E+FD+LL+ + GL AF FLK+EF EENIEFW+ACEDFKK+K PQ++ KA+ IY FI
Sbjct: 84 GESFDKLLSHRDGLEAFTRFLKTEFSEENIEFWIACEDFKKSKGPQQIHLKAKAIYEKFI 143
Query: 453 EKEAPKEINIDFQTKTLIAQNIQEATSGCFTTAQKRVYSLMENNSYPRFLESEFYQDLCR 632
+ +APKE+N+DF TK +I +I + T F AQ RVY LME +SY RFL+S+ Y DL
Sbjct: 144 QTDAPKEVNLDFHTKEVITNSITQPTLHSFDAAQSRVYQLMEQDSYTRFLKSDIYLDLME 203
Query: 633 KPPQITT 653
PQ T
Sbjct: 204 GRPQRPT 210
>ref|NP_001034241.1| regulator of G-protein signaling 21 [Homo sapiens].
Length = 152
Score = 160 bits (405), Expect = 3e-39
Identities = 77/130 (59%), Positives = 97/130 (74%)
Frame = +3
Query: 237 FIKPSPEEAQLWAEAFDELLASKYGLAAFRAFLKSEFCEENIEFWLACEDFKKTKSPQKL 416
F + E W+E D LLA++ GL AFR FLKSEF EEN+EFWLACEDFKKTK+ K+
Sbjct: 7 FYRSPTAETMTWSENMDTLLANQAGLDAFRIFLKSEFSEENVEFWLACEDFKKTKNADKI 66
Query: 417 SSKARKIYTDFIEKEAPKEINIDFQTKTLIAQNIQEATSGCFTTAQKRVYSLMENNSYPR 596
+SKA+ IY++FIE +APKEINIDF T+ LI++NI E T CF AQK +Y LM +S+PR
Sbjct: 67 ASKAKMIYSEFIEADAPKEINIDFGTRDLISKNIAEPTLKCFDEAQKLIYCLMAKDSFPR 126
Query: 597 FLESEFYQDL 626
FL+SE Y+ L
Sbjct: 127 FLKSEIYKKL 136
>ref|NP_602299.1| regulator of G-protein signaling 3 isoform 4 [Homo sapiens].
Length = 168
Score = 158 bits (399), Expect = 1e-38
Identities = 72/128 (56%), Positives = 95/128 (74%)
Frame = +3
Query: 243 KPSPEEAQLWAEAFDELLASKYGLAAFRAFLKSEFCEENIEFWLACEDFKKTKSPQKLSS 422
KP+ EEA W E+ ++LL KYGLA F+AFL++EF EEN+EFWLACEDFKK KS K++S
Sbjct: 31 KPTSEEALKWGESLEKLLVHKYGLAVFQAFLRTEFSEENLEFWLACEDFKKVKSQSKMAS 90
Query: 423 KARKIYTDFIEKEAPKEINIDFQTKTLIAQNIQEATSGCFTTAQKRVYSLMENNSYPRFL 602
KA+KI+ ++I +A KE+N+D T+ N+Q T GCF AQKR++ LME +SYPRFL
Sbjct: 91 KAKKIFAEYIAIQACKEVNLDSYTREHTKDNLQSVTRGCFDLAQKRIFGLMEKDSYPRFL 150
Query: 603 ESEFYQDL 626
S+ Y DL
Sbjct: 151 RSDLYLDL 158
Database: RefSeq49_HP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,297,164
Number of sequences in database: 32,964
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 32964
Number of Hits to DB: 49,070,571
Number of extensions: 1208560
Number of successful extensions: 3867
Number of sequences better than 1.0e-05: 49
Number of HSP's gapped: 3835
Number of HSP's successfully gapped: 49
Length of query: 449
Length of database: 18,297,164
Length adjustment: 106
Effective length of query: 343
Effective length of database: 14,802,980
Effective search space: 5077422140
Effective search space used: 5077422140
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to Sscrofa10_2
BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-013451
(1348 letters)
Database: Sscrofa_10.2.fasta
4582 sequences; 2,808,509,378 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Sscrofa_Chr10 1584 0.0
Sscrofa_Chr16 100 4e-18
>Sscrofa_Chr10
|| Length = 79102373
Score = 1584 bits (799), Expect = 0.0
Identities = 825/838 (98%)
Strand = Plus / Minus
Query: 472 agataaacatagactttcaaaccaaaactctcattgcccaaaacatacaagaggctacaa 531
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2544291 agataaacatagactttcaaaccaaaactctcattgcccaaaacatacaagaggctacaa 2544232
Query: 532 gtggctgctttacaactgcccagaaaagggtgtacagcttgatggagaacaactcttatc 591
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2544231 gtggctgctttacaactgcccagaaaagggtgtacagcttgatggagaacaactcttatc 2544172
Query: 592 cccgtttcttggagtctgaattctaccaagacttgtgtaggaagccgccgcagatcacca 651
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2544171 cccgtttcttggagtctgaattctaccaagacttgtgtaggaagccgccgcagatcacca 2544112
Query: 652 cagagccccatgccacatgagatggaaacgggagccccgcaacgaggacattgcnnnnnn 711
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2544111 cagagccccatgccacatgagatggaaacgggagccccgcaacgaggacattgctttttt 2544052
Query: 712 nnnnnnngtttcctaaggggaaaggctgtcacctgccgaaaagactgaccttgaattcag 771
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2544051 tctttttgtttcctaaggggaaaggctgtcacctgccgaaaagactgaccttgaattcag 2543992
Query: 772 cctgggtgttgaggaaacatcactcagaactattgattcggagttagtgagtcaggaagc 831
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2543991 cctgggtgttgaggaaacatcactcagaactattgattcggagttagtgagtcaggaagc 2543932
Query: 832 caggagcagtctaggagaagccggcactgggacagcttccagaactgatggagcacaggg 891
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2543931 caggagcagtctaggagaagccggcactgggacagcttccagaactgatggagcacaggg 2543872
Query: 892 aggcagtggccaggatgtggcgtgtctcacgctgggaaagcaggcacgcgagactgaagg 951
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2543871 aggcagtggccaggatgtggcgtgtctcacgctgggaaagcaggcacgcgagactgaagg 2543812
Query: 952 gtgacagtgtaacgctatggtccaagagcactgaaaatcaataggtctgggattatgtgg 1011
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2543811 gtgacagtgtaacgctatggtccaagagcactgaaaatcaataggtctgggattatgtgg 2543752
Query: 1012 ccttagctagctggctgtacatacttccctaactcagtccttgtcaccccagagtggttt 1071
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2543751 ccttagctagctggctgtacatacttccctaactcagtccttgtcaccccagagtggttt 2543692
Query: 1072 agtggtagctttttagtcctaggtgccatgtttactctgtacaggggtctcgacgttctt 1131
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2543691 agtggtagctttttagtcctaggtgccatgtttactctgtacaggggtctcgacgttctt 2543632
Query: 1132 acgactacaggtcctcagtactggcccgcgtgactctaaacctgaaacggtctgtgttta 1191
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2543631 acgactacaggtcctcagtactggcccgcgtgactctaaacctgaaacggtctgtgttta 2543572
Query: 1192 aatggtcagttgctgtgtgtcacaggatgagtgctgtggtgtagaaagcgacaatgtccg 1251
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2543571 aatggtcagttgctgtgtgtcacaggatgagtgctgtggtgtagaaagcgacaatgtccg 2543512
Query: 1252 tgaggagtgccaaaaactgtcctgatggcagctacactttgacatggtctttgaagac 1309
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2543511 tgaggagtgccaaaaactgtcctgatggcagctacactttgacatggtctttgaagac 2543454
Score = 289 bits (146), Expect = 2e-75
Identities = 160/167 (95%)
Strand = Plus / Minus
Query: 307 atggtcttgctgcattcagagcttttttgaaatctgaattctgtgaagaaaatattgaat 366
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2544741 atggtcttgctgcattcagagcttttttgaaatctgaattctgtgaagaaaatattgaat 2544682
Query: 367 tctggctggcctgtgaagacttcnnnnnnncaaagtcaccccaaaagctgtcctccaaag 426
||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 2544681 tctggctggcctgtgaagacttcaaaaaaacaaagtcaccccaaaagctgtcctccaaag 2544622
Query: 427 ccaggaaaatatacactgacttcatagaaaaagaagctccaaaagag 473
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2544621 ccaggaaaatatacactgacttcatagaaaaagaagctccaaaagag 2544575
Score = 280 bits (141), Expect = 2e-72
Identities = 141/141 (100%)
Strand = Plus / Minus
Query: 2 agagagcgggcacccgggagcgtagacgataatgcaaagtgctatgttcctgactgtcca 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2546744 agagagcgggcacccgggagcgtagacgataatgcaaagtgctatgttcctgactgtcca 2546685
Query: 62 tcacgactgcggacccatggacaagagcgcaggcaccggccccaaaagcgaggagaagcg 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2546684 tcacgactgcggacccatggacaagagcgcaggcaccggccccaaaagcgaggagaagcg 2546625
Query: 122 ggagaagatgaagcggaccct 142
|||||||||||||||||||||
Sbjct: 2546624 ggagaagatgaagcggaccct 2546604
Score = 204 bits (103), Expect = 9e-50
Identities = 103/103 (100%)
Strand = Plus / Minus
Query: 143 attaaaagattggaagacccgtttgagctacttcttgcaaaactcctcctctcctgggaa 202
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2545535 attaaaagattggaagacccgtttgagctacttcttgcaaaactcctcctctcctgggaa 2545476
Query: 203 gcccaaaaccggcaagaaaagcaaaccgcaaaccttcatcaag 245
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2545475 gcccaaaaccggcaagaaaagcaaaccgcaaaccttcatcaag 2545433
Score = 123 bits (62), Expect = 3e-25
Identities = 62/62 (100%)
Strand = Plus / Minus
Query: 245 gccttctcctgaggaagcacagctgtgggcagaagcatttgatgagctgctagccagcaa 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2545333 gccttctcctgaggaagcacagctgtgggcagaagcatttgatgagctgctagccagcaa 2545274
Query: 305 at 306
||
Sbjct: 2545273 at 2545272
>Sscrofa_Chr16
|| Length = 86898991
Score = 99.6 bits (50), Expect = 4e-18
Identities = 77/86 (89%)
Strand = Plus / Minus
Query: 989 tcaataggtctgggattatgtggccttagctagctggctgtacatacttccctaactcag 1048
|||||||||||||||||||||||||||||||| |||||||||||| |||||||| ||||
Sbjct: 9772964 tcaataggtctgggattatgtggccttagctacctggctgtacatctttccctaaatcag 9772905
Query: 1049 tccttgtcaccccagagtggtttagt 1074
||||| | || || |||||||||||
Sbjct: 9772904 tccttattactacatagtggtttagt 9772879
Database: Sscrofa_10.2.fasta
Posted date: Nov 16, 2011 10:34 AM
Number of letters in database: 2,808,509,378
Number of sequences in database: 4582
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4582
Number of Hits to DB: 39,199,861
Number of extensions: 206
Number of successful extensions: 206
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 205
Number of HSP's successfully gapped: 7
Length of query: 1348
Length of database: 2,808,509,378
Length adjustment: 21
Effective length of query: 1327
Effective length of database: 2,808,413,156
Effective search space: 3726764258012
Effective search space used: 3726764258012
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 18 (36.2 bits)
S2: 30 (60.0 bits)