Animal-Genome cDNA 20110601C-013458

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-013458
         (1751 letters)

Database: RefSeq49_CP.fasta 
           33,336 sequences; 18,874,504 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|XP_540583.2| PREDICTED: similar to leupaxin [Canis familiari...   645   0.0  
Alignment   gi|XP_543425.2| PREDICTED: similar to Paxillin [Canis familiari...   411   e-115
Alignment   gi|XP_547052.2| PREDICTED: similar to androgen receptor coactiv...   354   2e-97
Alignment   gi|XP_536411.2| PREDICTED: similar to LIM domain binding 3 isof...   155   2e-37
Alignment   gi|XP_865054.1| PREDICTED: similar to LIM domain binding 3 isof...   155   2e-37
Alignment   gi|XP_852115.1| PREDICTED: similar to LIM domain binding 3 isof...   155   2e-37
Alignment   gi|XP_865000.1| PREDICTED: similar to LIM domain binding 3 isof...   155   2e-37
Alignment   gi|XP_864848.1| PREDICTED: similar to LIM domain binding 3 isof...   155   2e-37
Alignment   gi|XP_861793.1| PREDICTED: similar to Enigma homolog (Enigma-li...   154   3e-37
Alignment   gi|XP_861766.1| PREDICTED: similar to PDZ and LIM domain 5 isof...   154   3e-37

>ref|XP_540583.2| PREDICTED: similar to leupaxin [Canis familiaris].
          Length = 386

 Score =  645 bits (1665), Expect = 0.0
 Identities = 297/371 (80%), Positives = 317/371 (85%)
 Frame = +3

Query: 129  STLQESDEYDSPASLSLDGHSKKESDLAETSKVPSAQDDTSSFSVQLVYTTNIQEPRVYS 308
            STLQ+SDE  +P  L LD HS+KES+LAETS+  S Q+D S   VQLVYTT+IQE  +YS
Sbjct: 14   STLQDSDESSNPDPLPLDQHSRKESNLAETSETVSVQNDPSPLPVQLVYTTHIQECNIYS 73

Query: 309  EVQXXXXXXXXXXXXXXAQLDELMAHLCEMQIQCTVKADASTKHLPEKQDPKTSLDSMXX 488
            EVQ              AQLDELMAHLCEMQ Q  +K DAS KH+  KQDPK SLDSM  
Sbjct: 74   EVQEPKKTPHPPKTSAAAQLDELMAHLCEMQTQVAMKEDASKKHIANKQDPKASLDSMLG 133

Query: 489  XXXXXXXXXXIATVPKGHCASCQKPIAGKMIHALGQAWHPEHFVCAHCKEEIGSSPFFER 668
                      +A VPKGHCASCQKPIAGK+IHALGQAWHPEHFVC HCKEEIGSSPFFER
Sbjct: 134  GLEQDLQDLGVAAVPKGHCASCQKPIAGKVIHALGQAWHPEHFVCTHCKEEIGSSPFFER 193

Query: 669  TGLAYCSKDYHHLFSPRCAYCAAPILDKVLTAMDQTWHPEHFFCAHCGEVFGAEGFHEKD 848
            +GLAYCSKDYHHLFSPRCAYCAAPILD+VLTAM+QTWHPEHFFC+HCGEVFGAEGFHEKD
Sbjct: 194  SGLAYCSKDYHHLFSPRCAYCAAPILDRVLTAMNQTWHPEHFFCSHCGEVFGAEGFHEKD 253

Query: 849  KKPYCRKDFLAMFSPKCGGCNRPVLENYLSAMDTVWHPECFVCGDCFSSFSTGSFFELDG 1028
            KKPYCRKDFLAMFSPKCGGCNRPVLENYLSAMDTVWHPECFVCGDCFSSFS+GSFFELDG
Sbjct: 254  KKPYCRKDFLAMFSPKCGGCNRPVLENYLSAMDTVWHPECFVCGDCFSSFSSGSFFELDG 313

Query: 1029 RPFCELHYHQRRGTLCHGCGQPITGRCISAMGYKFHPEHFVCDFCLMQLSKGIFREQNDK 1208
            RP+CELHYHQRRGTLCHGCGQPITGRCISAMG+KFHPEHFVC FCL QLSKGIFREQ+DK
Sbjct: 314  RPYCELHYHQRRGTLCHGCGQPITGRCISAMGHKFHPEHFVCAFCLTQLSKGIFREQDDK 373

Query: 1209 TYCQPCFNKLF 1241
            TYCQPCF KLF
Sbjct: 374  TYCQPCFTKLF 384



 Score = 92.0 bits (227), Expect = 2e-18
 Identities = 44/129 (34%), Positives = 60/129 (46%), Gaps = 1/129 (0%)
 Frame = +3

Query: 897  CGGCNRPVLENYLSAMDTVWHPECFVCGDCFSSFSTGSFFELDGRPFCELHYHQRRGTLC 1076
            C  C +P+    + A+   WHPE FVC  C     +  FFE  G  +C   YH      C
Sbjct: 152  CASCQKPIAGKVIHALGQAWHPEHFVCTHCKEEIGSSPFFERSGLAYCSKDYHHLFSPRC 211

Query: 1077 HGCGQPITGRCISAMGYKFHPEHFVCDFCLMQLSKGIFREQNDKTYCQPCFNKLFT-Q*S 1253
              C  PI  R ++AM   +HPEHF C  C        F E++ K YC+  F  +F+ +  
Sbjct: 212  AYCAAPILDRVLTAMNQTWHPEHFFCSHCGEVFGAEGFHEKDKKPYCRKDFLAMFSPKCG 271

Query: 1254 QLNPDLLEN 1280
              N  +LEN
Sbjct: 272  GCNRPVLEN 280


>ref|XP_543425.2| PREDICTED: similar to Paxillin [Canis familiaris].
          Length = 664

 Score =  411 bits (1057), Expect = e-115
 Identities = 175/261 (67%), Positives = 207/261 (79%)
 Frame = +3

Query: 459  PKTSLDSMXXXXXXXXXXXXIATVPKGHCASCQKPIAGKMIHALGQAWHPEHFVCAHCKE 638
            P + LDSM            +ATV KG C +C+KPIAG+++ A+G+ WHPEHFVC HC+E
Sbjct: 403  PGSQLDSMLGSLQSDLNKLGVATVAKGVCGACKKPIAGQVVTAMGKTWHPEHFVCTHCQE 462

Query: 639  EIGSSPFFERTGLAYCSKDYHHLFSPRCAYCAAPILDKVLTAMDQTWHPEHFFCAHCGEV 818
            EIGS  FFER G  YC KDYH+LFSPRC YC  PILDKV+TA+D+TWHPEHFFCA CG  
Sbjct: 463  EIGSRNFFERDGQPYCEKDYHNLFSPRCYYCNGPILDKVVTALDRTWHPEHFFCAQCGAF 522

Query: 819  FGAEGFHEKDKKPYCRKDFLAMFSPKCGGCNRPVLENYLSAMDTVWHPECFVCGDCFSSF 998
            FG EGFHEKD K YCRKD+  MF+PKCGGC R +LENY+SA++T+WHPECFVC +CF+ F
Sbjct: 523  FGPEGFHEKDGKAYCRKDYFDMFAPKCGGCARAILENYISALNTLWHPECFVCRECFTPF 582

Query: 999  STGSFFELDGRPFCELHYHQRRGTLCHGCGQPITGRCISAMGYKFHPEHFVCDFCLMQLS 1178
              GSFFE DG+P+CE+HYH+RRG+LC GC +PITGRCI+AM  KFHPEHFVC FCL QL+
Sbjct: 583  VNGSFFEHDGQPYCEVHYHERRGSLCSGCQKPITGRCITAMAKKFHPEHFVCAFCLKQLN 642

Query: 1179 KGIFREQNDKTYCQPCFNKLF 1241
            KG F+EQNDK YCQ CF KLF
Sbjct: 643  KGTFKEQNDKPYCQNCFLKLF 663



 Score = 57.4 bits (137), Expect = 4e-08
 Identities = 22/58 (37%), Positives = 37/58 (63%)
 Frame = +3

Query: 1071 LCHGCGQPITGRCISAMGYKFHPEHFVCDFCLMQLSKGIFREQNDKTYCQPCFNKLFT 1244
            +C  C +PI G+ ++AMG  +HPEHFVC  C  ++    F E++ + YC+  ++ LF+
Sbjct: 430  VCGACKKPIAGQVVTAMGKTWHPEHFVCTHCQEEIGSRNFFERDGQPYCEKDYHNLFS 487


>ref|XP_547052.2| PREDICTED: similar to androgen receptor coactivator ARA55 [Canis
            familiaris].
          Length = 461

 Score =  354 bits (908), Expect = 2e-97
 Identities = 156/304 (51%), Positives = 202/304 (66%), Gaps = 11/304 (3%)
 Frame = +3

Query: 363  QLDELMAHLCEMQIQCTVKADASTKH---------LPEKQDP--KTSLDSMXXXXXXXXX 509
            +LD LMA L + ++Q  + A  ST+           P    P  K SLD+M         
Sbjct: 157  ELDRLMASLSDFRVQNHLPASGSTQPPVPSSVNEGSPSSPGPASKGSLDTMLGLLQSDLS 216

Query: 510  XXXIATVPKGHCASCQKPIAGKMIHALGQAWHPEHFVCAHCKEEIGSSPFFERTGLAYCS 689
               + T  KG C SC KPIAG+++ ALG+AWHPEHF+C  C   +G S FFE+ G  +C 
Sbjct: 217  RRGVPTQTKGLCGSCSKPIAGQVVTALGRAWHPEHFICGGCSMALGGSSFFEKDGAPFCP 276

Query: 690  KDYHHLFSPRCAYCAAPILDKVLTAMDQTWHPEHFFCAHCGEVFGAEGFHEKDKKPYCRK 869
            + Y   FSPRC  C  PI  K++TA+   WHPEHF C  CGE FG EGFHE++ +PYCR+
Sbjct: 277  ECYFERFSPRCGLCNQPIRHKMVTALGTHWHPEHFCCVSCGEPFGDEGFHEREGRPYCRR 336

Query: 870  DFLAMFSPKCGGCNRPVLENYLSAMDTVWHPECFVCGDCFSSFSTGSFFELDGRPFCELH 1049
            DFL +F+P+C GC  P+L+NY+SA+  +WHP+CFVC +CF+ FS GSFFE +GRP CE H
Sbjct: 337  DFLQLFAPRCQGCQGPILDNYISALSALWHPDCFVCRECFAPFSGGSFFEHEGRPLCENH 396

Query: 1050 YHQRRGTLCHGCGQPITGRCISAMGYKFHPEHFVCDFCLMQLSKGIFREQNDKTYCQPCF 1229
            +H RRG+LC  CG P+TGRC+SA+G +FHP+HF C FCL  L+KG F+E+  K YCQPCF
Sbjct: 397  FHARRGSLCATCGLPVTGRCVSALGRRFHPDHFTCTFCLRPLTKGSFQERAGKPYCQPCF 456

Query: 1230 NKLF 1241
             KLF
Sbjct: 457  VKLF 460



 Score = 57.4 bits (137), Expect = 4e-08
 Identities = 22/58 (37%), Positives = 35/58 (60%)
 Frame = +3

Query: 1071 LCHGCGQPITGRCISAMGYKFHPEHFVCDFCLMQLSKGIFREQNDKTYCQPCFNKLFT 1244
            LC  C +PI G+ ++A+G  +HPEHF+C  C M L    F E++   +C  C+ + F+
Sbjct: 227  LCGSCSKPIAGQVVTALGRAWHPEHFICGGCSMALGGSSFFEKDGAPFCPECYFERFS 284


>ref|XP_536411.2| PREDICTED: similar to LIM domain binding 3 isoform 1 [Canis
            familiaris].
          Length = 632

 Score =  155 bits (391), Expect = 2e-37
 Identities = 66/173 (38%), Positives = 94/173 (54%), Gaps = 2/173 (1%)
 Frame = +3

Query: 543  CASCQKPIAGKMIHALGQAWHPEHFVCAHCKEEIGSSPFFERTGLAYCSKDYHHLFSPRC 722
            C  C   I G  + A+G++WHPE F CA+CK  +    F E     YC + Y   F+P C
Sbjct: 456  CGHCNNVIRGPFLVAMGRSWHPEEFNCAYCKTSLADVCFVEEQSNVYCERCYEQFFAPIC 515

Query: 723  AYCAAPILDKVLTAMDQTWHPEHFFCAHCGEVFGAEGFHEKDKKPYCRKDFLAMFSPKCG 902
            A C   I+ +V+ A+ QTWH   F CA C + FG   FH +D +PYC KD++ +FS KC 
Sbjct: 516  AKCNTKIMGEVMHALRQTWHTTCFVCAACKKPFGNSLFHMEDGEPYCEKDYVNLFSTKCH 575

Query: 903  GCNRPVL--ENYLSAMDTVWHPECFVCGDCFSSFSTGSFFELDGRPFCELHYH 1055
            GC+ PV   + ++ A+   WH  CF+C  C  +     F+    +P C+ H H
Sbjct: 576  GCDFPVEAGDKFIEALGHTWHDTCFICAVCHVNLEGQPFYSKKDKPLCKKHAH 628



 Score =  124 bits (312), Expect = 2e-28
 Identities = 58/172 (33%), Positives = 81/172 (47%), Gaps = 2/172 (1%)
 Frame = +3

Query: 711  SPRCAYCAAPILDKVLTAMDQTWHPEHFFCAHCGEVFGAEGFHEKDKKPYCRKDFLAMFS 890
            +P C +C   I    L AM ++WHPE F CA+C        F E+    YC + +   F+
Sbjct: 453  TPLCGHCNNVIRGPFLVAMGRSWHPEEFNCAYCKTSLADVCFVEEQSNVYCERCYEQFFA 512

Query: 891  PKCGGCNRPVLENYLSAMDTVWHPECFVCGDCFSSFSTGSFFELDGRPFCELHYHQRRGT 1070
            P C  CN  ++   + A+   WH  CFVC  C   F    F   DG P+CE  Y     T
Sbjct: 513  PICAKCNTKIMGEVMHALRQTWHTTCFVCAACKKPFGNSLFHMEDGEPYCEKDYVNLFST 572

Query: 1071 LCHGCGQPITG--RCISAMGYKFHPEHFVCDFCLMQLSKGIFREQNDKTYCQ 1220
             CHGC  P+    + I A+G+ +H   F+C  C + L    F  + DK  C+
Sbjct: 573  KCHGCDFPVEAGDKFIEALGHTWHDTCFICAVCHVNLEGQPFYSKKDKPLCK 624



 Score = 75.9 bits (185), Expect = 1e-13
 Identities = 37/119 (31%), Positives = 54/119 (45%)
 Frame = +3

Query: 888  SPKCGGCNRPVLENYLSAMDTVWHPECFVCGDCFSSFSTGSFFELDGRPFCELHYHQRRG 1067
            +P CG CN  +   +L AM   WHPE F C  C +S +   F E     +CE  Y Q   
Sbjct: 453  TPLCGHCNNVIRGPFLVAMGRSWHPEEFNCAYCKTSLADVCFVEEQSNVYCERCYEQFFA 512

Query: 1068 TLCHGCGQPITGRCISAMGYKFHPEHFVCDFCLMQLSKGIFREQNDKTYCQPCFNKLFT 1244
             +C  C   I G  + A+   +H   FVC  C       +F  ++ + YC+  +  LF+
Sbjct: 513  PICAKCNTKIMGEVMHALRQTWHTTCFVCAACKKPFGNSLFHMEDGEPYCEKDYVNLFS 571



 Score = 51.2 bits (121), Expect = 3e-06
 Identities = 22/60 (36%), Positives = 30/60 (50%)
 Frame = +3

Query: 1062 RGTLCHGCGQPITGRCISAMGYKFHPEHFVCDFCLMQLSKGIFREQNDKTYCQPCFNKLF 1241
            R  LC  C   I G  + AMG  +HPE F C +C   L+   F E+    YC+ C+ + F
Sbjct: 452  RTPLCGHCNNVIRGPFLVAMGRSWHPEEFNCAYCKTSLADVCFVEEQSNVYCERCYEQFF 511


>ref|XP_865054.1| PREDICTED: similar to LIM domain binding 3 isoform 13 [Canis
            familiaris].
          Length = 690

 Score =  155 bits (391), Expect = 2e-37
 Identities = 66/173 (38%), Positives = 94/173 (54%), Gaps = 2/173 (1%)
 Frame = +3

Query: 543  CASCQKPIAGKMIHALGQAWHPEHFVCAHCKEEIGSSPFFERTGLAYCSKDYHHLFSPRC 722
            C  C   I G  + A+G++WHPE F CA+CK  +    F E     YC + Y   F+P C
Sbjct: 514  CGHCNNVIRGPFLVAMGRSWHPEEFNCAYCKTSLADVCFVEEQSNVYCERCYEQFFAPIC 573

Query: 723  AYCAAPILDKVLTAMDQTWHPEHFFCAHCGEVFGAEGFHEKDKKPYCRKDFLAMFSPKCG 902
            A C   I+ +V+ A+ QTWH   F CA C + FG   FH +D +PYC KD++ +FS KC 
Sbjct: 574  AKCNTKIMGEVMHALRQTWHTTCFVCAACKKPFGNSLFHMEDGEPYCEKDYVNLFSTKCH 633

Query: 903  GCNRPVL--ENYLSAMDTVWHPECFVCGDCFSSFSTGSFFELDGRPFCELHYH 1055
            GC+ PV   + ++ A+   WH  CF+C  C  +     F+    +P C+ H H
Sbjct: 634  GCDFPVEAGDKFIEALGHTWHDTCFICAVCHVNLEGQPFYSKKDKPLCKKHAH 686



 Score =  124 bits (312), Expect = 2e-28
 Identities = 58/172 (33%), Positives = 81/172 (47%), Gaps = 2/172 (1%)
 Frame = +3

Query: 711  SPRCAYCAAPILDKVLTAMDQTWHPEHFFCAHCGEVFGAEGFHEKDKKPYCRKDFLAMFS 890
            +P C +C   I    L AM ++WHPE F CA+C        F E+    YC + +   F+
Sbjct: 511  TPLCGHCNNVIRGPFLVAMGRSWHPEEFNCAYCKTSLADVCFVEEQSNVYCERCYEQFFA 570

Query: 891  PKCGGCNRPVLENYLSAMDTVWHPECFVCGDCFSSFSTGSFFELDGRPFCELHYHQRRGT 1070
            P C  CN  ++   + A+   WH  CFVC  C   F    F   DG P+CE  Y     T
Sbjct: 571  PICAKCNTKIMGEVMHALRQTWHTTCFVCAACKKPFGNSLFHMEDGEPYCEKDYVNLFST 630

Query: 1071 LCHGCGQPITG--RCISAMGYKFHPEHFVCDFCLMQLSKGIFREQNDKTYCQ 1220
             CHGC  P+    + I A+G+ +H   F+C  C + L    F  + DK  C+
Sbjct: 631  KCHGCDFPVEAGDKFIEALGHTWHDTCFICAVCHVNLEGQPFYSKKDKPLCK 682



 Score = 75.9 bits (185), Expect = 1e-13
 Identities = 37/119 (31%), Positives = 54/119 (45%)
 Frame = +3

Query: 888  SPKCGGCNRPVLENYLSAMDTVWHPECFVCGDCFSSFSTGSFFELDGRPFCELHYHQRRG 1067
            +P CG CN  +   +L AM   WHPE F C  C +S +   F E     +CE  Y Q   
Sbjct: 511  TPLCGHCNNVIRGPFLVAMGRSWHPEEFNCAYCKTSLADVCFVEEQSNVYCERCYEQFFA 570

Query: 1068 TLCHGCGQPITGRCISAMGYKFHPEHFVCDFCLMQLSKGIFREQNDKTYCQPCFNKLFT 1244
             +C  C   I G  + A+   +H   FVC  C       +F  ++ + YC+  +  LF+
Sbjct: 571  PICAKCNTKIMGEVMHALRQTWHTTCFVCAACKKPFGNSLFHMEDGEPYCEKDYVNLFS 629



 Score = 51.2 bits (121), Expect = 3e-06
 Identities = 22/60 (36%), Positives = 30/60 (50%)
 Frame = +3

Query: 1062 RGTLCHGCGQPITGRCISAMGYKFHPEHFVCDFCLMQLSKGIFREQNDKTYCQPCFNKLF 1241
            R  LC  C   I G  + AMG  +HPE F C +C   L+   F E+    YC+ C+ + F
Sbjct: 510  RTPLCGHCNNVIRGPFLVAMGRSWHPEEFNCAYCKTSLADVCFVEEQSNVYCERCYEQFF 569


>ref|XP_852115.1| PREDICTED: similar to LIM domain binding 3 isoform 2 [Canis
            familiaris].
          Length = 621

 Score =  155 bits (391), Expect = 2e-37
 Identities = 66/173 (38%), Positives = 94/173 (54%), Gaps = 2/173 (1%)
 Frame = +3

Query: 543  CASCQKPIAGKMIHALGQAWHPEHFVCAHCKEEIGSSPFFERTGLAYCSKDYHHLFSPRC 722
            C  C   I G  + A+G++WHPE F CA+CK  +    F E     YC + Y   F+P C
Sbjct: 445  CGHCNNVIRGPFLVAMGRSWHPEEFNCAYCKTSLADVCFVEEQSNVYCERCYEQFFAPIC 504

Query: 723  AYCAAPILDKVLTAMDQTWHPEHFFCAHCGEVFGAEGFHEKDKKPYCRKDFLAMFSPKCG 902
            A C   I+ +V+ A+ QTWH   F CA C + FG   FH +D +PYC KD++ +FS KC 
Sbjct: 505  AKCNTKIMGEVMHALRQTWHTTCFVCAACKKPFGNSLFHMEDGEPYCEKDYVNLFSTKCH 564

Query: 903  GCNRPVL--ENYLSAMDTVWHPECFVCGDCFSSFSTGSFFELDGRPFCELHYH 1055
            GC+ PV   + ++ A+   WH  CF+C  C  +     F+    +P C+ H H
Sbjct: 565  GCDFPVEAGDKFIEALGHTWHDTCFICAVCHVNLEGQPFYSKKDKPLCKKHAH 617



 Score =  124 bits (312), Expect = 2e-28
 Identities = 58/172 (33%), Positives = 81/172 (47%), Gaps = 2/172 (1%)
 Frame = +3

Query: 711  SPRCAYCAAPILDKVLTAMDQTWHPEHFFCAHCGEVFGAEGFHEKDKKPYCRKDFLAMFS 890
            +P C +C   I    L AM ++WHPE F CA+C        F E+    YC + +   F+
Sbjct: 442  TPLCGHCNNVIRGPFLVAMGRSWHPEEFNCAYCKTSLADVCFVEEQSNVYCERCYEQFFA 501

Query: 891  PKCGGCNRPVLENYLSAMDTVWHPECFVCGDCFSSFSTGSFFELDGRPFCELHYHQRRGT 1070
            P C  CN  ++   + A+   WH  CFVC  C   F    F   DG P+CE  Y     T
Sbjct: 502  PICAKCNTKIMGEVMHALRQTWHTTCFVCAACKKPFGNSLFHMEDGEPYCEKDYVNLFST 561

Query: 1071 LCHGCGQPITG--RCISAMGYKFHPEHFVCDFCLMQLSKGIFREQNDKTYCQ 1220
             CHGC  P+    + I A+G+ +H   F+C  C + L    F  + DK  C+
Sbjct: 562  KCHGCDFPVEAGDKFIEALGHTWHDTCFICAVCHVNLEGQPFYSKKDKPLCK 613



 Score = 75.9 bits (185), Expect = 1e-13
 Identities = 37/119 (31%), Positives = 54/119 (45%)
 Frame = +3

Query: 888  SPKCGGCNRPVLENYLSAMDTVWHPECFVCGDCFSSFSTGSFFELDGRPFCELHYHQRRG 1067
            +P CG CN  +   +L AM   WHPE F C  C +S +   F E     +CE  Y Q   
Sbjct: 442  TPLCGHCNNVIRGPFLVAMGRSWHPEEFNCAYCKTSLADVCFVEEQSNVYCERCYEQFFA 501

Query: 1068 TLCHGCGQPITGRCISAMGYKFHPEHFVCDFCLMQLSKGIFREQNDKTYCQPCFNKLFT 1244
             +C  C   I G  + A+   +H   FVC  C       +F  ++ + YC+  +  LF+
Sbjct: 502  PICAKCNTKIMGEVMHALRQTWHTTCFVCAACKKPFGNSLFHMEDGEPYCEKDYVNLFS 560



 Score = 51.2 bits (121), Expect = 3e-06
 Identities = 22/60 (36%), Positives = 30/60 (50%)
 Frame = +3

Query: 1062 RGTLCHGCGQPITGRCISAMGYKFHPEHFVCDFCLMQLSKGIFREQNDKTYCQPCFNKLF 1241
            R  LC  C   I G  + AMG  +HPE F C +C   L+   F E+    YC+ C+ + F
Sbjct: 441  RTPLCGHCNNVIRGPFLVAMGRSWHPEEFNCAYCKTSLADVCFVEEQSNVYCERCYEQFF 500


>ref|XP_865000.1| PREDICTED: similar to LIM domain binding 3 isoform 11 [Canis
            familiaris].
          Length = 463

 Score =  155 bits (391), Expect = 2e-37
 Identities = 66/173 (38%), Positives = 94/173 (54%), Gaps = 2/173 (1%)
 Frame = +3

Query: 543  CASCQKPIAGKMIHALGQAWHPEHFVCAHCKEEIGSSPFFERTGLAYCSKDYHHLFSPRC 722
            C  C   I G  + A+G++WHPE F CA+CK  +    F E     YC + Y   F+P C
Sbjct: 287  CGHCNNVIRGPFLVAMGRSWHPEEFNCAYCKTSLADVCFVEEQSNVYCERCYEQFFAPIC 346

Query: 723  AYCAAPILDKVLTAMDQTWHPEHFFCAHCGEVFGAEGFHEKDKKPYCRKDFLAMFSPKCG 902
            A C   I+ +V+ A+ QTWH   F CA C + FG   FH +D +PYC KD++ +FS KC 
Sbjct: 347  AKCNTKIMGEVMHALRQTWHTTCFVCAACKKPFGNSLFHMEDGEPYCEKDYVNLFSTKCH 406

Query: 903  GCNRPVL--ENYLSAMDTVWHPECFVCGDCFSSFSTGSFFELDGRPFCELHYH 1055
            GC+ PV   + ++ A+   WH  CF+C  C  +     F+    +P C+ H H
Sbjct: 407  GCDFPVEAGDKFIEALGHTWHDTCFICAVCHVNLEGQPFYSKKDKPLCKKHAH 459



 Score =  124 bits (312), Expect = 2e-28
 Identities = 58/172 (33%), Positives = 81/172 (47%), Gaps = 2/172 (1%)
 Frame = +3

Query: 711  SPRCAYCAAPILDKVLTAMDQTWHPEHFFCAHCGEVFGAEGFHEKDKKPYCRKDFLAMFS 890
            +P C +C   I    L AM ++WHPE F CA+C        F E+    YC + +   F+
Sbjct: 284  TPLCGHCNNVIRGPFLVAMGRSWHPEEFNCAYCKTSLADVCFVEEQSNVYCERCYEQFFA 343

Query: 891  PKCGGCNRPVLENYLSAMDTVWHPECFVCGDCFSSFSTGSFFELDGRPFCELHYHQRRGT 1070
            P C  CN  ++   + A+   WH  CFVC  C   F    F   DG P+CE  Y     T
Sbjct: 344  PICAKCNTKIMGEVMHALRQTWHTTCFVCAACKKPFGNSLFHMEDGEPYCEKDYVNLFST 403

Query: 1071 LCHGCGQPITG--RCISAMGYKFHPEHFVCDFCLMQLSKGIFREQNDKTYCQ 1220
             CHGC  P+    + I A+G+ +H   F+C  C + L    F  + DK  C+
Sbjct: 404  KCHGCDFPVEAGDKFIEALGHTWHDTCFICAVCHVNLEGQPFYSKKDKPLCK 455



 Score = 75.9 bits (185), Expect = 1e-13
 Identities = 37/119 (31%), Positives = 54/119 (45%)
 Frame = +3

Query: 888  SPKCGGCNRPVLENYLSAMDTVWHPECFVCGDCFSSFSTGSFFELDGRPFCELHYHQRRG 1067
            +P CG CN  +   +L AM   WHPE F C  C +S +   F E     +CE  Y Q   
Sbjct: 284  TPLCGHCNNVIRGPFLVAMGRSWHPEEFNCAYCKTSLADVCFVEEQSNVYCERCYEQFFA 343

Query: 1068 TLCHGCGQPITGRCISAMGYKFHPEHFVCDFCLMQLSKGIFREQNDKTYCQPCFNKLFT 1244
             +C  C   I G  + A+   +H   FVC  C       +F  ++ + YC+  +  LF+
Sbjct: 344  PICAKCNTKIMGEVMHALRQTWHTTCFVCAACKKPFGNSLFHMEDGEPYCEKDYVNLFS 402



 Score = 51.2 bits (121), Expect = 3e-06
 Identities = 22/60 (36%), Positives = 30/60 (50%)
 Frame = +3

Query: 1062 RGTLCHGCGQPITGRCISAMGYKFHPEHFVCDFCLMQLSKGIFREQNDKTYCQPCFNKLF 1241
            R  LC  C   I G  + AMG  +HPE F C +C   L+   F E+    YC+ C+ + F
Sbjct: 283  RTPLCGHCNNVIRGPFLVAMGRSWHPEEFNCAYCKTSLADVCFVEEQSNVYCERCYEQFF 342


>ref|XP_864848.1| PREDICTED: similar to LIM domain binding 3 isoform 3 [Canis
            familiaris].
          Length = 674

 Score =  155 bits (391), Expect = 2e-37
 Identities = 66/173 (38%), Positives = 94/173 (54%), Gaps = 2/173 (1%)
 Frame = +3

Query: 543  CASCQKPIAGKMIHALGQAWHPEHFVCAHCKEEIGSSPFFERTGLAYCSKDYHHLFSPRC 722
            C  C   I G  + A+G++WHPE F CA+CK  +    F E     YC + Y   F+P C
Sbjct: 498  CGHCNNVIRGPFLVAMGRSWHPEEFNCAYCKTSLADVCFVEEQSNVYCERCYEQFFAPIC 557

Query: 723  AYCAAPILDKVLTAMDQTWHPEHFFCAHCGEVFGAEGFHEKDKKPYCRKDFLAMFSPKCG 902
            A C   I+ +V+ A+ QTWH   F CA C + FG   FH +D +PYC KD++ +FS KC 
Sbjct: 558  AKCNTKIMGEVMHALRQTWHTTCFVCAACKKPFGNSLFHMEDGEPYCEKDYVNLFSTKCH 617

Query: 903  GCNRPVL--ENYLSAMDTVWHPECFVCGDCFSSFSTGSFFELDGRPFCELHYH 1055
            GC+ PV   + ++ A+   WH  CF+C  C  +     F+    +P C+ H H
Sbjct: 618  GCDFPVEAGDKFIEALGHTWHDTCFICAVCHVNLEGQPFYSKKDKPLCKKHAH 670



 Score =  124 bits (312), Expect = 2e-28
 Identities = 58/172 (33%), Positives = 81/172 (47%), Gaps = 2/172 (1%)
 Frame = +3

Query: 711  SPRCAYCAAPILDKVLTAMDQTWHPEHFFCAHCGEVFGAEGFHEKDKKPYCRKDFLAMFS 890
            +P C +C   I    L AM ++WHPE F CA+C        F E+    YC + +   F+
Sbjct: 495  TPLCGHCNNVIRGPFLVAMGRSWHPEEFNCAYCKTSLADVCFVEEQSNVYCERCYEQFFA 554

Query: 891  PKCGGCNRPVLENYLSAMDTVWHPECFVCGDCFSSFSTGSFFELDGRPFCELHYHQRRGT 1070
            P C  CN  ++   + A+   WH  CFVC  C   F    F   DG P+CE  Y     T
Sbjct: 555  PICAKCNTKIMGEVMHALRQTWHTTCFVCAACKKPFGNSLFHMEDGEPYCEKDYVNLFST 614

Query: 1071 LCHGCGQPITG--RCISAMGYKFHPEHFVCDFCLMQLSKGIFREQNDKTYCQ 1220
             CHGC  P+    + I A+G+ +H   F+C  C + L    F  + DK  C+
Sbjct: 615  KCHGCDFPVEAGDKFIEALGHTWHDTCFICAVCHVNLEGQPFYSKKDKPLCK 666



 Score = 75.9 bits (185), Expect = 1e-13
 Identities = 37/119 (31%), Positives = 54/119 (45%)
 Frame = +3

Query: 888  SPKCGGCNRPVLENYLSAMDTVWHPECFVCGDCFSSFSTGSFFELDGRPFCELHYHQRRG 1067
            +P CG CN  +   +L AM   WHPE F C  C +S +   F E     +CE  Y Q   
Sbjct: 495  TPLCGHCNNVIRGPFLVAMGRSWHPEEFNCAYCKTSLADVCFVEEQSNVYCERCYEQFFA 554

Query: 1068 TLCHGCGQPITGRCISAMGYKFHPEHFVCDFCLMQLSKGIFREQNDKTYCQPCFNKLFT 1244
             +C  C   I G  + A+   +H   FVC  C       +F  ++ + YC+  +  LF+
Sbjct: 555  PICAKCNTKIMGEVMHALRQTWHTTCFVCAACKKPFGNSLFHMEDGEPYCEKDYVNLFS 613



 Score = 51.2 bits (121), Expect = 3e-06
 Identities = 22/60 (36%), Positives = 30/60 (50%)
 Frame = +3

Query: 1062 RGTLCHGCGQPITGRCISAMGYKFHPEHFVCDFCLMQLSKGIFREQNDKTYCQPCFNKLF 1241
            R  LC  C   I G  + AMG  +HPE F C +C   L+   F E+    YC+ C+ + F
Sbjct: 494  RTPLCGHCNNVIRGPFLVAMGRSWHPEEFNCAYCKTSLADVCFVEEQSNVYCERCYEQFF 553


>ref|XP_861793.1| PREDICTED: similar to Enigma homolog (Enigma-like PDZ and LIM domains
            protein) isoform 13 [Canis familiaris].
          Length = 596

 Score =  154 bits (389), Expect = 3e-37
 Identities = 68/173 (39%), Positives = 90/173 (52%), Gaps = 2/173 (1%)
 Frame = +3

Query: 543  CASCQKPIAGKMIHALGQAWHPEHFVCAHCKEEIGSSPFFERTGLAYCSKDYHHLFSPRC 722
            CA C + I G  + ALG++WHPE F C+HCK  +    F E  G  YC   Y   F+P C
Sbjct: 420  CAHCNQVIRGPFLVALGKSWHPEEFNCSHCKNTMAYIGFVEEKGALYCELCYEKFFAPEC 479

Query: 723  AYCAAPILDKVLTAMDQTWHPEHFFCAHCGEVFGAEGFHEKDKKPYCRKDFLAMFSPKCG 902
              C   IL +V+ A+ QTWH   F C  CG+      FH +D +PYC  D+ A+F   C 
Sbjct: 480  GRCQRKILGEVINALKQTWHVSCFVCVACGKPIRNNVFHLEDGEPYCETDYYALFGTICH 539

Query: 903  GCNRPVL--ENYLSAMDTVWHPECFVCGDCFSSFSTGSFFELDGRPFCELHYH 1055
            GC  P+   + +L A+   WH  CFVC  C  S    +FF    +P C+ H H
Sbjct: 540  GCEFPIEAGDMFLEALGYTWHDTCFVCSVCCESLEGQTFFSKKDKPLCKKHAH 592



 Score =  136 bits (342), Expect = 7e-32
 Identities = 63/172 (36%), Positives = 85/172 (49%), Gaps = 2/172 (1%)
 Frame = +3

Query: 711  SPRCAYCAAPILDKVLTAMDQTWHPEHFFCAHCGEVFGAEGFHEKDKKPYCRKDFLAMFS 890
            +P CA+C   I    L A+ ++WHPE F C+HC       GF E+    YC   +   F+
Sbjct: 417  TPMCAHCNQVIRGPFLVALGKSWHPEEFNCSHCKNTMAYIGFVEEKGALYCELCYEKFFA 476

Query: 891  PKCGGCNRPVLENYLSAMDTVWHPECFVCGDCFSSFSTGSFFELDGRPFCELHYHQRRGT 1070
            P+CG C R +L   ++A+   WH  CFVC  C        F   DG P+CE  Y+   GT
Sbjct: 477  PECGRCQRKILGEVINALKQTWHVSCFVCVACGKPIRNNVFHLEDGEPYCETDYYALFGT 536

Query: 1071 LCHGCGQPITG--RCISAMGYKFHPEHFVCDFCLMQLSKGIFREQNDKTYCQ 1220
            +CHGC  PI      + A+GY +H   FVC  C   L    F  + DK  C+
Sbjct: 537  ICHGCEFPIEAGDMFLEALGYTWHDTCFVCSVCCESLEGQTFFSKKDKPLCK 588



 Score = 73.2 bits (178), Expect = 8e-13
 Identities = 36/118 (30%), Positives = 57/118 (48%)
 Frame = +3

Query: 888  SPKCGGCNRPVLENYLSAMDTVWHPECFVCGDCFSSFSTGSFFELDGRPFCELHYHQRRG 1067
            +P C  CN+ +   +L A+   WHPE F C  C ++ +   F E  G  +CEL Y +   
Sbjct: 417  TPMCAHCNQVIRGPFLVALGKSWHPEEFNCSHCKNTMAYIGFVEEKGALYCELCYEKFFA 476

Query: 1068 TLCHGCGQPITGRCISAMGYKFHPEHFVCDFCLMQLSKGIFREQNDKTYCQPCFNKLF 1241
              C  C + I G  I+A+   +H   FVC  C   +   +F  ++ + YC+  +  LF
Sbjct: 477  PECGRCQRKILGEVINALKQTWHVSCFVCVACGKPIRNNVFHLEDGEPYCETDYYALF 534


>ref|XP_861766.1| PREDICTED: similar to PDZ and LIM domain 5 isoform b isoform 12
            [Canis familiaris].
          Length = 498

 Score =  154 bits (389), Expect = 3e-37
 Identities = 68/173 (39%), Positives = 90/173 (52%), Gaps = 2/173 (1%)
 Frame = +3

Query: 543  CASCQKPIAGKMIHALGQAWHPEHFVCAHCKEEIGSSPFFERTGLAYCSKDYHHLFSPRC 722
            CA C + I G  + ALG++WHPE F C+HCK  +    F E  G  YC   Y   F+P C
Sbjct: 322  CAHCNQVIRGPFLVALGKSWHPEEFNCSHCKNTMAYIGFVEEKGALYCELCYEKFFAPEC 381

Query: 723  AYCAAPILDKVLTAMDQTWHPEHFFCAHCGEVFGAEGFHEKDKKPYCRKDFLAMFSPKCG 902
              C   IL +V+ A+ QTWH   F C  CG+      FH +D +PYC  D+ A+F   C 
Sbjct: 382  GRCQRKILGEVINALKQTWHVSCFVCVACGKPIRNNVFHLEDGEPYCETDYYALFGTICH 441

Query: 903  GCNRPVL--ENYLSAMDTVWHPECFVCGDCFSSFSTGSFFELDGRPFCELHYH 1055
            GC  P+   + +L A+   WH  CFVC  C  S    +FF    +P C+ H H
Sbjct: 442  GCEFPIEAGDMFLEALGYTWHDTCFVCSVCCESLEGQTFFSKKDKPLCKKHAH 494



 Score =  136 bits (342), Expect = 7e-32
 Identities = 63/172 (36%), Positives = 85/172 (49%), Gaps = 2/172 (1%)
 Frame = +3

Query: 711  SPRCAYCAAPILDKVLTAMDQTWHPEHFFCAHCGEVFGAEGFHEKDKKPYCRKDFLAMFS 890
            +P CA+C   I    L A+ ++WHPE F C+HC       GF E+    YC   +   F+
Sbjct: 319  TPMCAHCNQVIRGPFLVALGKSWHPEEFNCSHCKNTMAYIGFVEEKGALYCELCYEKFFA 378

Query: 891  PKCGGCNRPVLENYLSAMDTVWHPECFVCGDCFSSFSTGSFFELDGRPFCELHYHQRRGT 1070
            P+CG C R +L   ++A+   WH  CFVC  C        F   DG P+CE  Y+   GT
Sbjct: 379  PECGRCQRKILGEVINALKQTWHVSCFVCVACGKPIRNNVFHLEDGEPYCETDYYALFGT 438

Query: 1071 LCHGCGQPITG--RCISAMGYKFHPEHFVCDFCLMQLSKGIFREQNDKTYCQ 1220
            +CHGC  PI      + A+GY +H   FVC  C   L    F  + DK  C+
Sbjct: 439  ICHGCEFPIEAGDMFLEALGYTWHDTCFVCSVCCESLEGQTFFSKKDKPLCK 490



 Score = 73.2 bits (178), Expect = 8e-13
 Identities = 36/118 (30%), Positives = 57/118 (48%)
 Frame = +3

Query: 888  SPKCGGCNRPVLENYLSAMDTVWHPECFVCGDCFSSFSTGSFFELDGRPFCELHYHQRRG 1067
            +P C  CN+ +   +L A+   WHPE F C  C ++ +   F E  G  +CEL Y +   
Sbjct: 319  TPMCAHCNQVIRGPFLVALGKSWHPEEFNCSHCKNTMAYIGFVEEKGALYCELCYEKFFA 378

Query: 1068 TLCHGCGQPITGRCISAMGYKFHPEHFVCDFCLMQLSKGIFREQNDKTYCQPCFNKLF 1241
              C  C + I G  I+A+   +H   FVC  C   +   +F  ++ + YC+  +  LF
Sbjct: 379  PECGRCQRKILGEVINALKQTWHVSCFVCVACGKPIRNNVFHLEDGEPYCETDYYALF 436


  Database: RefSeq49_CP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 18,874,504
  Number of sequences in database:  33,336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33336
Number of Hits to DB: 71,061,669
Number of extensions: 1953156
Number of successful extensions: 8467
Number of sequences better than 1.0e-05: 100
Number of HSP's gapped: 7921
Number of HSP's successfully gapped: 279
Length of query: 583
Length of database: 18,874,504
Length adjustment: 108
Effective length of query: 475
Effective length of database: 15,274,216
Effective search space: 7255252600
Effective search space used: 7255252600
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-013458
         (1751 letters)

Database: RefSeq49_BP.fasta 
           33,088 sequences; 17,681,374 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_001020253.1| leupaxin [Bos taurus].                            644   0.0  
Alignment   gi|XP_595626.4| PREDICTED: paxillin-like [Bos taurus].               417   e-116
Alignment   gi|XP_002694569.1| PREDICTED: paxillin-like [Bos taurus].            415   e-116
Alignment   gi|NP_001030390.1| transforming growth factor beta-1-induced tr...   353   3e-97
Alignment   gi|NP_001076964.1| LIM and senescent cell antigen-like domains ...   135   9e-32
Alignment   gi|NP_001124223.1| LIM and senescent cell antigen-like-containi...   132   7e-31
Alignment   gi|NP_001106722.1| PDZ and LIM domain protein 7 isoform 2 [Bos ...   131   2e-30
Alignment   gi|NP_001106730.1| four and a half LIM domains 1 isoform 2 [Bos...   126   7e-29
Alignment   gi|NP_001106729.1| four and a half LIM domains 1 isoform 1 [Bos...   126   7e-29
Alignment   gi|XP_002698576.1| PREDICTED: actin binding LIM protein 1 [Bos ...   119   9e-27

>ref|NP_001020253.1| leupaxin [Bos taurus].
          Length = 386

 Score =  644 bits (1660), Expect = 0.0
 Identities = 296/372 (79%), Positives = 314/372 (84%)
 Frame = +3

Query: 126  HSTLQESDEYDSPASLSLDGHSKKESDLAETSKVPSAQDDTSSFSVQLVYTTNIQEPRVY 305
            +ST QESDEY   AS  LD HS+KES+L ETSKVPS  DDT+ F VQLVYTT IQ P VY
Sbjct: 13   YSTFQESDEYSKAASPPLDQHSRKESNLDETSKVPSVPDDTNPFPVQLVYTTEIQGPNVY 72

Query: 306  SEVQXXXXXXXXXXXXXXAQLDELMAHLCEMQIQCTVKADASTKHLPEKQDPKTSLDSMX 485
            SE+Q              AQLDELMAHLCE+Q Q T KADAS K + + QD K SLDSM 
Sbjct: 73   SEIQEPKESPPASKTSAAAQLDELMAHLCELQHQVTAKADASKKPVSDSQDHKASLDSML 132

Query: 486  XXXXXXXXXXXIATVPKGHCASCQKPIAGKMIHALGQAWHPEHFVCAHCKEEIGSSPFFE 665
                       IATVPKGHCASCQKPIAGK+IHALGQAWHPEHFVCAHCK EIGSSPFFE
Sbjct: 133  GGLEQDLQNLGIATVPKGHCASCQKPIAGKVIHALGQAWHPEHFVCAHCKAEIGSSPFFE 192

Query: 666  RTGLAYCSKDYHHLFSPRCAYCAAPILDKVLTAMDQTWHPEHFFCAHCGEVFGAEGFHEK 845
            R+GLAYC++DYHHLFSPRCAYCAAPILDKVLTAM+QTWHPEHFFCAHCGEVFG EGFHEK
Sbjct: 193  RSGLAYCAEDYHHLFSPRCAYCAAPILDKVLTAMNQTWHPEHFFCAHCGEVFGEEGFHEK 252

Query: 846  DKKPYCRKDFLAMFSPKCGGCNRPVLENYLSAMDTVWHPECFVCGDCFSSFSTGSFFELD 1025
            DKKPYCRKDFL MF+P+CGGCNRPVLENYLSAM TVWHPECFVCG+CFS FSTGSFFELD
Sbjct: 253  DKKPYCRKDFLGMFAPRCGGCNRPVLENYLSAMGTVWHPECFVCGECFSGFSTGSFFELD 312

Query: 1026 GRPFCELHYHQRRGTLCHGCGQPITGRCISAMGYKFHPEHFVCDFCLMQLSKGIFREQND 1205
            GRPFCELHYHQRRGTLCHGCGQPITGRCISAMGYKFHPEHFVC FCL QLSKG+F+EQND
Sbjct: 313  GRPFCELHYHQRRGTLCHGCGQPITGRCISAMGYKFHPEHFVCTFCLTQLSKGVFKEQND 372

Query: 1206 KTYCQPCFNKLF 1241
            KTYC PCFNKLF
Sbjct: 373  KTYCHPCFNKLF 384



 Score = 54.7 bits (130), Expect = 3e-07
 Identities = 22/57 (38%), Positives = 33/57 (57%)
 Frame = +3

Query: 1074 CHGCGQPITGRCISAMGYKFHPEHFVCDFCLMQLSKGIFREQNDKTYCQPCFNKLFT 1244
            C  C +PI G+ I A+G  +HPEHFVC  C  ++    F E++   YC   ++ LF+
Sbjct: 152  CASCQKPIAGKVIHALGQAWHPEHFVCAHCKAEIGSSPFFERSGLAYCAEDYHHLFS 208


>ref|XP_595626.4| PREDICTED: paxillin-like [Bos taurus].
          Length = 424

 Score =  417 bits (1071), Expect = e-116
 Identities = 185/295 (62%), Positives = 222/295 (75%), Gaps = 2/295 (0%)
 Frame = +3

Query: 363  QLDELMAHLCEMQIQCTVKADASTKHLPEKQDPK--TSLDSMXXXXXXXXXXXXIATVPK 536
            +LDELMA L + +     K  +S+   P    PK  + LDSM            +ATV K
Sbjct: 132  ELDELMASLSDFKFMAQGKTGSSS---PPGGPPKPGSQLDSMLGSLQSDLNKLGVATVAK 188

Query: 537  GHCASCQKPIAGKMIHALGQAWHPEHFVCAHCKEEIGSSPFFERTGLAYCSKDYHHLFSP 716
            G C +C+KPIAG+++ A+G+ WHPEHFVC HC+EEIGS  FFER G  YC KDYH+LFSP
Sbjct: 189  GVCGACKKPIAGQVVTAMGKTWHPEHFVCTHCQEEIGSRNFFERDGQPYCEKDYHNLFSP 248

Query: 717  RCAYCAAPILDKVLTAMDQTWHPEHFFCAHCGEVFGAEGFHEKDKKPYCRKDFLAMFSPK 896
            RC YC  PILDKV+TA+D+TWHPEHFFCA CG  FG EGFHEKD K YCRKD+  MF+PK
Sbjct: 249  RCYYCNGPILDKVVTALDRTWHPEHFFCAQCGAFFGPEGFHEKDGKAYCRKDYFDMFAPK 308

Query: 897  CGGCNRPVLENYLSAMDTVWHPECFVCGDCFSSFSTGSFFELDGRPFCELHYHQRRGTLC 1076
            CGGC R +LENY+SA++T+WHPECFVC +CF+ F  GSFFE +G+P+CE HYH+RRG+LC
Sbjct: 309  CGGCARAILENYISALNTLWHPECFVCRECFTPFVHGSFFEHEGQPYCEAHYHERRGSLC 368

Query: 1077 HGCGQPITGRCISAMGYKFHPEHFVCDFCLMQLSKGIFREQNDKTYCQPCFNKLF 1241
             GC +PITGRCI+AM  KFHPEHFVC FCL QL+KG F+EQNDK YCQ CF KLF
Sbjct: 369  SGCQKPITGRCITAMAKKFHPEHFVCAFCLKQLNKGTFKEQNDKPYCQNCFLKLF 423



 Score = 57.4 bits (137), Expect = 4e-08
 Identities = 22/58 (37%), Positives = 37/58 (63%)
 Frame = +3

Query: 1071 LCHGCGQPITGRCISAMGYKFHPEHFVCDFCLMQLSKGIFREQNDKTYCQPCFNKLFT 1244
            +C  C +PI G+ ++AMG  +HPEHFVC  C  ++    F E++ + YC+  ++ LF+
Sbjct: 190  VCGACKKPIAGQVVTAMGKTWHPEHFVCTHCQEEIGSRNFFERDGQPYCEKDYHNLFS 247


>ref|XP_002694569.1| PREDICTED: paxillin-like [Bos taurus].
          Length = 427

 Score =  415 bits (1067), Expect = e-116
 Identities = 183/295 (62%), Positives = 221/295 (74%), Gaps = 2/295 (0%)
 Frame = +3

Query: 363  QLDELMAHLCEMQIQCTVKADASTKHLPEKQDPK--TSLDSMXXXXXXXXXXXXIATVPK 536
            +LDELMA L +++    +    +    P    PK  + LDSM            +ATV K
Sbjct: 132  ELDELMASLSDLRCPKFMAQGKTGSSSPPGGPPKPGSQLDSMLGSLQSDLNKLGVATVAK 191

Query: 537  GHCASCQKPIAGKMIHALGQAWHPEHFVCAHCKEEIGSSPFFERTGLAYCSKDYHHLFSP 716
            G C +C+KPIAG+++ A+G+ WHPEHFVC HC+EEIGS  FFER G  YC KDYH+LFSP
Sbjct: 192  GVCGACKKPIAGQVVTAMGKTWHPEHFVCTHCQEEIGSRNFFERDGQPYCEKDYHNLFSP 251

Query: 717  RCAYCAAPILDKVLTAMDQTWHPEHFFCAHCGEVFGAEGFHEKDKKPYCRKDFLAMFSPK 896
            RC YC  PILDKV+TA+D+TWHPEHFFCA CG  FG EGFHEKD K YCRKD+  MF+PK
Sbjct: 252  RCYYCNGPILDKVVTALDRTWHPEHFFCAQCGAFFGPEGFHEKDGKAYCRKDYFDMFAPK 311

Query: 897  CGGCNRPVLENYLSAMDTVWHPECFVCGDCFSSFSTGSFFELDGRPFCELHYHQRRGTLC 1076
            CGGC R +LENY+SA++T+WHPECFVC +CF+ F  GSFFE +G+P+CE HYH+RRG+LC
Sbjct: 312  CGGCARAILENYISALNTLWHPECFVCRECFTPFVHGSFFEHEGQPYCEAHYHERRGSLC 371

Query: 1077 HGCGQPITGRCISAMGYKFHPEHFVCDFCLMQLSKGIFREQNDKTYCQPCFNKLF 1241
             GC +PITGRCI+AM  KFHPEHFVC FCL QL+KG F+EQNDK YCQ CF KLF
Sbjct: 372  SGCQKPITGRCITAMAKKFHPEHFVCAFCLKQLNKGTFKEQNDKPYCQNCFLKLF 426



 Score = 57.4 bits (137), Expect = 4e-08
 Identities = 22/58 (37%), Positives = 37/58 (63%)
 Frame = +3

Query: 1071 LCHGCGQPITGRCISAMGYKFHPEHFVCDFCLMQLSKGIFREQNDKTYCQPCFNKLFT 1244
            +C  C +PI G+ ++AMG  +HPEHFVC  C  ++    F E++ + YC+  ++ LF+
Sbjct: 193  VCGACKKPIAGQVVTAMGKTWHPEHFVCTHCQEEIGSRNFFERDGQPYCEKDYHNLFS 250


>ref|NP_001030390.1| transforming growth factor beta-1-induced transcript 1 protein [Bos
            taurus].
          Length = 439

 Score =  353 bits (906), Expect = 3e-97
 Identities = 156/304 (51%), Positives = 201/304 (66%), Gaps = 11/304 (3%)
 Frame = +3

Query: 363  QLDELMAHLCEMQIQCTVKADAST---------KHLPEKQDP--KTSLDSMXXXXXXXXX 509
            +LD LMA L + ++Q  + A   T         +  P    P  K SLD+M         
Sbjct: 135  ELDRLMASLSDFRVQNHLPASGPTPPPVPSSMSEDTPSPPGPTSKGSLDTMLGLLQSDLS 194

Query: 510  XXXIATVPKGHCASCQKPIAGKMIHALGQAWHPEHFVCAHCKEEIGSSPFFERTGLAYCS 689
               + T  KG C SC KPIAG+++ ALG+AWHPEHFVC  C   +G S FFE+ G  +C 
Sbjct: 195  RRGVPTQAKGLCGSCNKPIAGQVVTALGRAWHPEHFVCGGCSTALGGSSFFEKDGAPFCP 254

Query: 690  KDYHHLFSPRCAYCAAPILDKVLTAMDQTWHPEHFFCAHCGEVFGAEGFHEKDKKPYCRK 869
            + Y   FSPRC  C  PI  K++TA+   WHPEHF C  CGE FG EGFHE++ +PYCR+
Sbjct: 255  ECYFERFSPRCGLCNQPIRHKMVTALGTHWHPEHFCCVSCGEPFGDEGFHEREGRPYCRR 314

Query: 870  DFLAMFSPKCGGCNRPVLENYLSAMDTVWHPECFVCGDCFSSFSTGSFFELDGRPFCELH 1049
            DFL +F+P+C GC  P+L+NY+SA+  +WHP+CFVC +CF+ FS GSFFE +GRP CE H
Sbjct: 315  DFLQLFAPRCQGCQGPILDNYISALSALWHPDCFVCRECFAPFSGGSFFEHEGRPLCENH 374

Query: 1050 YHQRRGTLCHGCGQPITGRCISAMGYKFHPEHFVCDFCLMQLSKGIFREQNDKTYCQPCF 1229
            +H RRG+LC  CG P+TGRC+SA+G +FHP+HF C FCL  L+KG F+E+  K YCQPCF
Sbjct: 375  FHARRGSLCATCGLPVTGRCVSALGRRFHPDHFTCTFCLRPLTKGSFQERAGKPYCQPCF 434

Query: 1230 NKLF 1241
             KLF
Sbjct: 435  LKLF 438



 Score = 55.5 bits (132), Expect = 2e-07
 Identities = 22/58 (37%), Positives = 34/58 (58%)
 Frame = +3

Query: 1071 LCHGCGQPITGRCISAMGYKFHPEHFVCDFCLMQLSKGIFREQNDKTYCQPCFNKLFT 1244
            LC  C +PI G+ ++A+G  +HPEHFVC  C   L    F E++   +C  C+ + F+
Sbjct: 205  LCGSCNKPIAGQVVTALGRAWHPEHFVCGGCSTALGGSSFFEKDGAPFCPECYFERFS 262


>ref|NP_001076964.1| LIM and senescent cell antigen-like domains 3-like [Bos taurus].
          Length = 337

 Score =  135 bits (341), Expect = 9e-32
 Identities = 79/243 (32%), Positives = 120/243 (49%), Gaps = 11/243 (4%)
 Frame = +3

Query: 546  ASCQKPIAG-----KMIHALGQAWHPEHFVCAHCKEEIGSSPFFERTGLAYCSKDYHHLF 710
            ASC++   G     K++++ G+ +H + FVCA C ++     F+E  G  YC  D+  LF
Sbjct: 20   ASCERCRGGFAPAEKIVNSNGELYHEQCFVCAQCFQQFPEGLFYEFEGRKYCEHDFQMLF 79

Query: 711  SPRCAYCAAPILDKVLTAMDQTWHPEHFFCAHCGEVFGAEGFHEKDKKPYC-----RKDF 875
            +P C  C   I+ +V+ AM+ +WHPE F C  C EV    GF +   +  C     R+  
Sbjct: 80   APCCHQCGEFIIGRVIKAMNNSWHPECFRCDLCQEVLADIGFVKNAGRHLCRPCHNREKA 139

Query: 876  LAMFSPKCGGCNRPVLENYLSAMDTVWHPECFVCGDCFSSFSTGSFFELDGRPFCELHYH 1055
              +    C  C+  + E  L   +  +HP+ F C +C     T    EL G  +C L  H
Sbjct: 140  RGLGKYICQKCHAIIDEQPLIFKNDPYHPDHFNCANCGKEL-TADARELKGELYC-LPCH 197

Query: 1056 QRRGT-LCHGCGQPITGRCISAMGYKFHPEHFVCDFCLMQLSKGIFREQNDKTYCQPCFN 1232
             + G  +C  C +PI GR ++AMG ++H EHFVC  C          E+    YC+  +N
Sbjct: 198  DKMGVPICGACRRPIEGRVVNAMGKQWHVEHFVCAKCEKPFLGHRHYERKGLAYCETHYN 257

Query: 1233 KLF 1241
            +LF
Sbjct: 258  QLF 260



 Score =  135 bits (340), Expect = 1e-31
 Identities = 78/238 (32%), Positives = 113/238 (47%), Gaps = 7/238 (2%)
 Frame = +3

Query: 543  CASCQKPIAGKMIHALGQAWHPEHFVCAHCKEEIGSSPFFERTGLAYCSKDYHHLFSPR- 719
            C  C + I G++I A+  +WHPE F C  C+E +    F +  G   C +  H+    R 
Sbjct: 83   CHQCGEFIIGRVIKAMNNSWHPECFRCDLCQEVLADIGFVKNAGRHLC-RPCHNREKARG 141

Query: 720  -----CAYCAAPILDKVLTAMDQTWHPEHFFCAHCGEVFGAEGFHEKDKKPYCRKDFLAM 884
                 C  C A I ++ L   +  +HP+HF CA+CG+   A+   E   + YC      M
Sbjct: 142  LGKYICQKCHAIIDEQPLIFKNDPYHPDHFNCANCGKELTADA-RELKGELYCLPCHDKM 200

Query: 885  FSPKCGGCNRPVLENYLSAMDTVWHPECFVCGDCFSSFSTGSFFELDGRPFCELHYHQRR 1064
              P CG C RP+    ++AM   WH E FVC  C   F     +E  G  +CE HY+Q  
Sbjct: 201  GVPICGACRRPIEGRVVNAMGKQWHVEHFVCAKCEKPFLGHRHYERKGLAYCETHYNQLF 260

Query: 1065 GTLCHGCGQPITGRCISAMGYKFHPEHFVCDFCLMQLS-KGIFREQNDKTYCQPCFNK 1235
            G +C  C + I G  +SA+   +    F C  C  +L+ K  F E + K  C+ C+ K
Sbjct: 261  GDVCFHCNRVIEGDVVSALNKAWCVHCFACSTCSAKLTLKNKFVEFDMKPVCKKCYEK 318


>ref|NP_001124223.1| LIM and senescent cell antigen-like-containing domain protein 2 [Bos
            taurus].
          Length = 341

 Score =  132 bits (333), Expect = 7e-31
 Identities = 76/237 (32%), Positives = 108/237 (45%), Gaps = 6/237 (2%)
 Frame = +3

Query: 543  CASCQKPIAGKMIHALGQAWHPEHFVCAHCKEEIGSSPFFERTGLAYCSKDYHH-----L 707
            C SC + I G++I A+   WHP  F C  C  E+    F +  G   C   ++      L
Sbjct: 76   CGSCGEFIIGRVIKAMNNNWHPGCFRCELCDVELADLGFVKNAGRHLCRPCHNREKAKGL 135

Query: 708  FSPRCAYCAAPILDKVLTAMDQTWHPEHFFCAHCGEVFGAEGFHEKDKKPYCRKDFLAMF 887
                C  C   I ++ L   +  +HP+HF C HCG+   AE   E   + YC      M 
Sbjct: 136  GKYICQRCHLVIDEQPLMFKNDAYHPDHFSCTHCGKELTAEA-RELKGELYCLPCHDKMG 194

Query: 888  SPKCGGCNRPVLENYLSAMDTVWHPECFVCGDCFSSFSTGSFFELDGRPFCELHYHQRRG 1067
             P CG C RP+    ++A+   WH E FVC  C   F     +E  G  +CE HY+Q  G
Sbjct: 195  VPICGACRRPIEGRVVNALGKQWHVEHFVCAKCEKPFLGHRHYEKKGLAYCETHYNQLFG 254

Query: 1068 TLCHGCGQPITGRCISAMGYKFHPEHFVCDFCLMQLS-KGIFREQNDKTYCQPCFNK 1235
             +C+ C   I G  +SA+   +    F C  C  +L+ K  F E + K  C+ C+ K
Sbjct: 255  DVCYTCSHVIEGDVVSALNKAWCVHCFSCSTCNSRLTLKNKFVEFDMKPVCKRCYEK 311



 Score =  124 bits (312), Expect = 2e-28
 Identities = 74/241 (30%), Positives = 110/241 (45%), Gaps = 8/241 (3%)
 Frame = +3

Query: 543  CASCQKPIAG--KMIHALGQAWHPEHFVCAHCKEEIGSSPFFERTGLAYCSKDYHHLFSP 716
            C  CQ   A   +++++ G+ +H   FVCA C        F+E  G  YC  D+  LF+P
Sbjct: 15   CQRCQARFAPAERIVNSNGELYHEHCFVCAQCFRPFPEGLFYEFEGRKYCEHDFQMLFAP 74

Query: 717  RCAYCAAPILDKVLTAMDQTWHPEHFFCAHCGEVFGAEGFHEKDKKPYC-----RKDFLA 881
             C  C   I+ +V+ AM+  WHP  F C  C       GF +   +  C     R+    
Sbjct: 75   CCGSCGEFIIGRVIKAMNNNWHPGCFRCELCDVELADLGFVKNAGRHLCRPCHNREKAKG 134

Query: 882  MFSPKCGGCNRPVLENYLSAMDTVWHPECFVCGDCFSSFSTGSFFELDGRPFCELHYHQR 1061
            +    C  C+  + E  L   +  +HP+ F C  C     T    EL G  +C L  H +
Sbjct: 135  LGKYICQRCHLVIDEQPLMFKNDAYHPDHFSCTHCGKEL-TAEARELKGELYC-LPCHDK 192

Query: 1062 RGT-LCHGCGQPITGRCISAMGYKFHPEHFVCDFCLMQLSKGIFREQNDKTYCQPCFNKL 1238
             G  +C  C +PI GR ++A+G ++H EHFVC  C          E+    YC+  +N+L
Sbjct: 193  MGVPICGACRRPIEGRVVNALGKQWHVEHFVCAKCEKPFLGHRHYEKKGLAYCETHYNQL 252

Query: 1239 F 1241
            F
Sbjct: 253  F 253


>ref|NP_001106722.1| PDZ and LIM domain protein 7 isoform 2 [Bos taurus].
          Length = 424

 Score =  131 bits (330), Expect = 2e-30
 Identities = 60/171 (35%), Positives = 87/171 (50%), Gaps = 2/171 (1%)
 Frame = +3

Query: 543  CASCQKPIAGKMIHALGQAWHPEHFVCAHCKEEIGSSPFFERTGLAYCSKDYHHLFSPRC 722
            C  C K I G+ + ALG+A+HPE FVC+ C + +    FFE  G  +C   Y   ++P C
Sbjct: 249  CHQCHKVIRGRYLVALGRAYHPEEFVCSQCGKVLEEGGFFEEKGAIFCPPCYDVRYAPSC 308

Query: 723  AYCAAPILDKVLTAMDQTWHPEHFFCAHCGEVFGAEGFHEKDKKPYCRKDFLAMFSPKCG 902
            A C   I  +V+ A+  TWH   F CA C        F+ ++  PYC  D+  MF  KC 
Sbjct: 309  AKCKKKITGEVMHALKTTWHVHCFTCAACKAPIRNRAFYMEEGAPYCEPDYEKMFGTKCR 368

Query: 903  GCNRPV--LENYLSAMDTVWHPECFVCGDCFSSFSTGSFFELDGRPFCELH 1049
            GC+  +   + +L A+   WH  CFVC  C  +    +F+    +P C+ H
Sbjct: 369  GCDFKIDAGDRFLEALGFSWHDTCFVCAICQINLEGKTFYSKKDKPLCKSH 419



 Score =  119 bits (299), Expect = 7e-27
 Identities = 54/172 (31%), Positives = 83/172 (48%), Gaps = 2/172 (1%)
 Frame = +3

Query: 711  SPRCAYCAAPILDKVLTAMDQTWHPEHFFCAHCGEVFGAEGFHEKDKKPYCRKDFLAMFS 890
            +P C  C   I  + L A+ + +HPE F C+ CG+V    GF E+    +C   +   ++
Sbjct: 246  TPVCHQCHKVIRGRYLVALGRAYHPEEFVCSQCGKVLEEGGFFEEKGAIFCPPCYDVRYA 305

Query: 891  PKCGGCNRPVLENYLSAMDTVWHPECFVCGDCFSSFSTGSFFELDGRPFCELHYHQRRGT 1070
            P C  C + +    + A+ T WH  CF C  C +     +F+  +G P+CE  Y +  GT
Sbjct: 306  PSCAKCKKKITGEVMHALKTTWHVHCFTCAACKAPIRNRAFYMEEGAPYCEPDYEKMFGT 365

Query: 1071 LCHGCGQPITG--RCISAMGYKFHPEHFVCDFCLMQLSKGIFREQNDKTYCQ 1220
             C GC   I    R + A+G+ +H   FVC  C + L    F  + DK  C+
Sbjct: 366  KCRGCDFKIDAGDRFLEALGFSWHDTCFVCAICQINLEGKTFYSKKDKPLCK 417



 Score = 77.8 bits (190), Expect = 3e-14
 Identities = 38/118 (32%), Positives = 53/118 (44%)
 Frame = +3

Query: 888  SPKCGGCNRPVLENYLSAMDTVWHPECFVCGDCFSSFSTGSFFELDGRPFCELHYHQRRG 1067
            +P C  C++ +   YL A+   +HPE FVC  C      G FFE  G  FC   Y  R  
Sbjct: 246  TPVCHQCHKVIRGRYLVALGRAYHPEEFVCSQCGKVLEEGGFFEEKGAIFCPPCYDVRYA 305

Query: 1068 TLCHGCGQPITGRCISAMGYKFHPEHFVCDFCLMQLSKGIFREQNDKTYCQPCFNKLF 1241
              C  C + ITG  + A+   +H   F C  C   +    F  +    YC+P + K+F
Sbjct: 306  PSCAKCKKKITGEVMHALKTTWHVHCFTCAACKAPIRNRAFYMEEGAPYCEPDYEKMF 363


>ref|NP_001106730.1| four and a half LIM domains 1 isoform 2 [Bos taurus].
          Length = 280

 Score =  126 bits (316), Expect = 7e-29
 Identities = 69/241 (28%), Positives = 104/241 (43%), Gaps = 9/241 (3%)
 Frame = +3

Query: 543  CASCQKPIAG--KMIHALGQAWHPEHFVCAHCKEEIGSSPFFERTGLAYCSKDYHHLFSP 716
            C  C+KPI    K +H   + WH   F C+ C + + S  F  +     C+K      +P
Sbjct: 40   CVQCRKPIGADSKEVHYKNRYWHDTCFRCSKCLQPLASETFVAKDNKILCNKCTTREDNP 99

Query: 717  RCAYCAAPIL--DKVLTAMDQTWHPEHFFCAHCGEVFGAEGFHEKDKKPYCRKDFLAMFS 890
            +C  C  PI+  D+ +      WH + F C++C +V G   F  K +  YC     A F+
Sbjct: 100  KCKGCLKPIVAGDQNVEYKGTVWHKDCFTCSNCKQVIGTGSFFPKGEDFYCVTCHEAKFA 159

Query: 891  PKCGGCNRPVLENYLSAMDTVWHPECFVCGDCFSSFSTGSFFELDGRPFCELHYHQRRGT 1070
              C  CN+ +    ++  D  WH ECFVC  C    +   F  ++ + +C   Y      
Sbjct: 160  KHCVKCNKAITSGGITYQDQPWHAECFVCVTCSKKLAGQRFTAVEDQYYCVDCYKNFVAK 219

Query: 1071 LCHGCGQPITG-----RCISAMGYKFHPEHFVCDFCLMQLSKGIFREQNDKTYCQPCFNK 1235
             C GC  PITG       ++  G  +H   F C  C + L+   F    ++ YC  C  K
Sbjct: 220  KCAGCKNPITGFGKGSSVVAYEGQSWHDYCFHCKKCSVNLANKRFVFHQEQVYCPDCAKK 279

Query: 1236 L 1238
            L
Sbjct: 280  L 280



 Score =  112 bits (279), Expect = 1e-24
 Identities = 61/211 (28%), Positives = 94/211 (44%), Gaps = 4/211 (1%)
 Frame = +3

Query: 609  EHFVCAHCKEEIGSSPFFERTGLAYCSKDYHHLFSPRCAYCAAPI--LDKVLTAMDQTWH 782
            E F C +C++ +    + ++ G   C K +    +  C  C  PI    K +   ++ WH
Sbjct: 3    EKFDCHYCRDNLQGKKYVQKDGHHCCLKCFDKFCANTCVQCRKPIGADSKEVHYKNRYWH 62

Query: 783  PEHFFCAHCGEVFGAEGFHEKDKKPYCRKDFLAMFSPKCGGCNRPVL--ENYLSAMDTVW 956
               F C+ C +   +E F  KD K  C K      +PKC GC +P++  +  +    TVW
Sbjct: 63   DTCFRCSKCLQPLASETFVAKDNKILCNKCTTREDNPKCKGCLKPIVAGDQNVEYKGTVW 122

Query: 957  HPECFVCGDCFSSFSTGSFFELDGRPFCELHYHQRRGTLCHGCGQPITGRCISAMGYKFH 1136
            H +CF C +C     TGSFF      +C   +  +    C  C + IT   I+     +H
Sbjct: 123  HKDCFTCSNCKQVIGTGSFFPKGEDFYCVTCHEAKFAKHCVKCNKAITSGGITYQDQPWH 182

Query: 1137 PEHFVCDFCLMQLSKGIFREQNDKTYCQPCF 1229
             E FVC  C  +L+   F    D+ YC  C+
Sbjct: 183  AECFVCVTCSKKLAGQRFTAVEDQYYCVDCY 213



 Score = 64.7 bits (156), Expect = 2e-10
 Identities = 37/158 (23%), Positives = 61/158 (38%), Gaps = 4/158 (2%)
 Frame = +3

Query: 786  EHFFCAHCGEVFGAEGFHEKDKKPYCRKDFLAMFSPKCGGCNRPVLENYLSA--MDTVWH 959
            E F C +C +    + + +KD    C K F    +  C  C +P+  +       +  WH
Sbjct: 3    EKFDCHYCRDNLQGKKYVQKDGHHCCLKCFDKFCANTCVQCRKPIGADSKEVHYKNRYWH 62

Query: 960  PECFVCGDCFSSFSTGSFFELDGRPFCELHYHQRRGTLCHGCGQPITG--RCISAMGYKF 1133
              CF C  C    ++ +F   D +  C     +     C GC +PI    + +   G  +
Sbjct: 63   DTCFRCSKCLQPLASETFVAKDNKILCNKCTTREDNPKCKGCLKPIVAGDQNVEYKGTVW 122

Query: 1134 HPEHFVCDFCLMQLSKGIFREQNDKTYCQPCFNKLFTQ 1247
            H + F C  C   +  G F  + +  YC  C    F +
Sbjct: 123  HKDCFTCSNCKQVIGTGSFFPKGEDFYCVTCHEAKFAK 160



 Score = 61.2 bits (147), Expect = 3e-09
 Identities = 33/113 (29%), Positives = 44/113 (38%), Gaps = 5/113 (4%)
 Frame = +3

Query: 540 HCASCQKPIAGKMIHALGQAWHPEHFVCAHCKEEIGSSPFFERTGLAYCSKDYHHLFSPR 719
           HC  C K I    I    Q WH E FVC  C +++    F       YC   Y +  + +
Sbjct: 161 HCVKCNKAITSGGITYQDQPWHAECFVCVTCSKKLAGQRFTAVEDQYYCVDCYKNFVAKK 220

Query: 720 CAYCAAPIL-----DKVLTAMDQTWHPEHFFCAHCGEVFGAEGFHEKDKKPYC 863
           CA C  PI        V+    Q+WH   F C  C      + F    ++ YC
Sbjct: 221 CAGCKNPITGFGKGSSVVAYEGQSWHDYCFHCKKCSVNLANKRFVFHQEQVYC 273


>ref|NP_001106729.1| four and a half LIM domains 1 isoform 1 [Bos taurus].
          Length = 296

 Score =  126 bits (316), Expect = 7e-29
 Identities = 69/241 (28%), Positives = 104/241 (43%), Gaps = 9/241 (3%)
 Frame = +3

Query: 543  CASCQKPIAG--KMIHALGQAWHPEHFVCAHCKEEIGSSPFFERTGLAYCSKDYHHLFSP 716
            C  C+KPI    K +H   + WH   F C+ C + + S  F  +     C+K      +P
Sbjct: 56   CVQCRKPIGADSKEVHYKNRYWHDTCFRCSKCLQPLASETFVAKDNKILCNKCTTREDNP 115

Query: 717  RCAYCAAPIL--DKVLTAMDQTWHPEHFFCAHCGEVFGAEGFHEKDKKPYCRKDFLAMFS 890
            +C  C  PI+  D+ +      WH + F C++C +V G   F  K +  YC     A F+
Sbjct: 116  KCKGCLKPIVAGDQNVEYKGTVWHKDCFTCSNCKQVIGTGSFFPKGEDFYCVTCHEAKFA 175

Query: 891  PKCGGCNRPVLENYLSAMDTVWHPECFVCGDCFSSFSTGSFFELDGRPFCELHYHQRRGT 1070
              C  CN+ +    ++  D  WH ECFVC  C    +   F  ++ + +C   Y      
Sbjct: 176  KHCVKCNKAITSGGITYQDQPWHAECFVCVTCSKKLAGQRFTAVEDQYYCVDCYKNFVAK 235

Query: 1071 LCHGCGQPITG-----RCISAMGYKFHPEHFVCDFCLMQLSKGIFREQNDKTYCQPCFNK 1235
             C GC  PITG       ++  G  +H   F C  C + L+   F    ++ YC  C  K
Sbjct: 236  KCAGCKNPITGFGKGSSVVAYEGQSWHDYCFHCKKCSVNLANKRFVFHQEQVYCPDCAKK 295

Query: 1236 L 1238
            L
Sbjct: 296  L 296



 Score =  112 bits (279), Expect = 1e-24
 Identities = 61/211 (28%), Positives = 94/211 (44%), Gaps = 4/211 (1%)
 Frame = +3

Query: 609  EHFVCAHCKEEIGSSPFFERTGLAYCSKDYHHLFSPRCAYCAAPI--LDKVLTAMDQTWH 782
            E F C +C++ +    + ++ G   C K +    +  C  C  PI    K +   ++ WH
Sbjct: 19   EKFDCHYCRDNLQGKKYVQKDGHHCCLKCFDKFCANTCVQCRKPIGADSKEVHYKNRYWH 78

Query: 783  PEHFFCAHCGEVFGAEGFHEKDKKPYCRKDFLAMFSPKCGGCNRPVL--ENYLSAMDTVW 956
               F C+ C +   +E F  KD K  C K      +PKC GC +P++  +  +    TVW
Sbjct: 79   DTCFRCSKCLQPLASETFVAKDNKILCNKCTTREDNPKCKGCLKPIVAGDQNVEYKGTVW 138

Query: 957  HPECFVCGDCFSSFSTGSFFELDGRPFCELHYHQRRGTLCHGCGQPITGRCISAMGYKFH 1136
            H +CF C +C     TGSFF      +C   +  +    C  C + IT   I+     +H
Sbjct: 139  HKDCFTCSNCKQVIGTGSFFPKGEDFYCVTCHEAKFAKHCVKCNKAITSGGITYQDQPWH 198

Query: 1137 PEHFVCDFCLMQLSKGIFREQNDKTYCQPCF 1229
             E FVC  C  +L+   F    D+ YC  C+
Sbjct: 199  AECFVCVTCSKKLAGQRFTAVEDQYYCVDCY 229



 Score = 64.7 bits (156), Expect = 2e-10
 Identities = 37/158 (23%), Positives = 61/158 (38%), Gaps = 4/158 (2%)
 Frame = +3

Query: 786  EHFFCAHCGEVFGAEGFHEKDKKPYCRKDFLAMFSPKCGGCNRPVLENYLSA--MDTVWH 959
            E F C +C +    + + +KD    C K F    +  C  C +P+  +       +  WH
Sbjct: 19   EKFDCHYCRDNLQGKKYVQKDGHHCCLKCFDKFCANTCVQCRKPIGADSKEVHYKNRYWH 78

Query: 960  PECFVCGDCFSSFSTGSFFELDGRPFCELHYHQRRGTLCHGCGQPITG--RCISAMGYKF 1133
              CF C  C    ++ +F   D +  C     +     C GC +PI    + +   G  +
Sbjct: 79   DTCFRCSKCLQPLASETFVAKDNKILCNKCTTREDNPKCKGCLKPIVAGDQNVEYKGTVW 138

Query: 1134 HPEHFVCDFCLMQLSKGIFREQNDKTYCQPCFNKLFTQ 1247
            H + F C  C   +  G F  + +  YC  C    F +
Sbjct: 139  HKDCFTCSNCKQVIGTGSFFPKGEDFYCVTCHEAKFAK 176



 Score = 61.2 bits (147), Expect = 3e-09
 Identities = 33/113 (29%), Positives = 44/113 (38%), Gaps = 5/113 (4%)
 Frame = +3

Query: 540 HCASCQKPIAGKMIHALGQAWHPEHFVCAHCKEEIGSSPFFERTGLAYCSKDYHHLFSPR 719
           HC  C K I    I    Q WH E FVC  C +++    F       YC   Y +  + +
Sbjct: 177 HCVKCNKAITSGGITYQDQPWHAECFVCVTCSKKLAGQRFTAVEDQYYCVDCYKNFVAKK 236

Query: 720 CAYCAAPIL-----DKVLTAMDQTWHPEHFFCAHCGEVFGAEGFHEKDKKPYC 863
           CA C  PI        V+    Q+WH   F C  C      + F    ++ YC
Sbjct: 237 CAGCKNPITGFGKGSSVVAYEGQSWHDYCFHCKKCSVNLANKRFVFHQEQVYC 289


>ref|XP_002698576.1| PREDICTED: actin binding LIM protein 1 [Bos taurus].
          Length = 709

 Score =  119 bits (298), Expect = 9e-27
 Identities = 66/228 (28%), Positives = 98/228 (42%), Gaps = 10/228 (4%)
 Frame = +3

Query: 531  PKGHCASCQKPIAGKMIHALGQAWHPEHFVCAHCKEEIGSSPFFERTGLAYCSKDYHHLF 710
            P  HC  C +P  G+++    + +H + F C  C  ++    FF + G   C+ DY  ++
Sbjct: 19   PVIHCHKCGEPCKGEVLRVQTKHFHIKCFTCKVCGCDLAQGGFFIKNGEYLCTLDYQRMY 78

Query: 711  SPRCAYCAAPILDKVLTAMDQTWHPEHFFCAHCGEVF---------GAEGFHEKDKKPYC 863
              RC  C   +  +V+TA+ +T+HP  F C  C   F         G +   +   +P  
Sbjct: 79   GTRCHGCGEFVEGEVVTALGKTYHPNCFACTICKRPFPPGDRVTFNGRDCLCQLCAQPMS 138

Query: 864  RKDFLAMFSPKCGGCNRPVLENY-LSAMDTVWHPECFVCGDCFSSFSTGSFFELDGRPFC 1040
                 A  S  C GC R +     L A++  WH  CF C  C     TG +   DG P+C
Sbjct: 139  SSPKEASCSGNCAGCGRDIKNGQALLALEKQWHLGCFKCKSC-GKVLTGEYISKDGAPYC 197

Query: 1041 ELHYHQRRGTLCHGCGQPITGRCISAMGYKFHPEHFVCDFCLMQLSKG 1184
            E  Y    G  C  C Q ITG+ + A    +HP    C  C    ++G
Sbjct: 198  EKDYQGLFGVKCEACHQFITGKVLEAGDKHYHPSCARCSRCNQMFTEG 245



 Score = 90.5 bits (223), Expect = 4e-18
 Identities = 52/172 (30%), Positives = 74/172 (43%), Gaps = 10/172 (5%)
 Frame = +3

Query: 543  CASCQKPIAGKMIHALGQAWHPEHFVCAHCKEEI---------GSSPFFERTGLAYCSKD 695
            C  C + + G+++ ALG+ +HP  F C  CK            G     +       S  
Sbjct: 82   CHGCGEFVEGEVVTALGKTYHPNCFACTICKRPFPPGDRVTFNGRDCLCQLCAQPMSSSP 141

Query: 696  YHHLFSPRCAYCAAPILD-KVLTAMDQTWHPEHFFCAHCGEVFGAEGFHEKDKKPYCRKD 872
                 S  CA C   I + + L A+++ WH   F C  CG+V   E +  KD  PYC KD
Sbjct: 142  KEASCSGNCAGCGRDIKNGQALLALEKQWHLGCFKCKSCGKVLTGE-YISKDGAPYCEKD 200

Query: 873  FLAMFSPKCGGCNRPVLENYLSAMDTVWHPECFVCGDCFSSFSTGSFFELDG 1028
            +  +F  KC  C++ +    L A D  +HP C  C  C   F+ G    L G
Sbjct: 201  YQGLFGVKCEACHQFITGKVLEAGDKHYHPSCARCSRCNQMFTEGEEMYLQG 252


  Database: RefSeq49_BP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 17,681,374
  Number of sequences in database:  33,088
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33088
Number of Hits to DB: 68,423,840
Number of extensions: 1921005
Number of successful extensions: 7979
Number of sequences better than 1.0e-05: 67
Number of HSP's gapped: 7540
Number of HSP's successfully gapped: 187
Length of query: 583
Length of database: 17,681,374
Length adjustment: 108
Effective length of query: 475
Effective length of database: 14,107,870
Effective search space: 6701238250
Effective search space used: 6701238250
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-013458
         (1751 letters)

Database: RefSeq49_SP.fasta 
           24,897 sequences; 11,343,932 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|XP_003122787.2| PREDICTED: leupaxin-like [Sus scrofa].            308   8e-84
Alignment   gi|XP_003357122.1| PREDICTED: PDZ and LIM domain protein 5, par...   155   7e-38
Alignment   gi|XP_003359314.1| PREDICTED: hypothetical protein LOC100151883...   154   1e-37
Alignment   gi|NP_001230787.1| LIM and senescent cell antigen-like domains ...   135   5e-32
Alignment   gi|XP_003357126.1| PREDICTED: PDZ and LIM domain protein 5-like...   134   1e-31
Alignment   gi|XP_003357125.1| PREDICTED: PDZ and LIM domain protein 5-like...   134   1e-31
Alignment   gi|XP_003133450.2| PREDICTED: LIM and senescent cell antigen-li...   125   1e-28
Alignment   gi|XP_003359555.1| PREDICTED: LIM and senescent cell antigen-li...   125   1e-28
Alignment   gi|NP_999540.1| four and a half LIM domains 1 protein, isoform ...   124   2e-28
Alignment   gi|NP_001230243.1| four and a half LIM domains protein 5 [Sus s...   120   2e-27

>ref|XP_003122787.2| PREDICTED: leupaxin-like [Sus scrofa].
          Length = 194

 Score =  308 bits (788), Expect = 8e-84
 Identities = 143/157 (91%), Positives = 143/157 (91%)
 Frame = +3

Query: 360 AQLDELMAHLCEMQIQCTVKADASTKHLPEKQDPKTSLDSMXXXXXXXXXXXXIATVPKG 539
           AQLDELMAHLCEMQIQ TVK DASTKHLPEKQDPKTSLDSM            IATVPKG
Sbjct: 23  AQLDELMAHLCEMQIQGTVKVDASTKHLPEKQDPKTSLDSMLGGLEQELQDLGIATVPKG 82

Query: 540 HCASCQKPIAGKMIHALGQAWHPEHFVCAHCKEEIGSSPFFERTGLAYCSKDYHHLFSPR 719
           HCASCQKPIAGKMIHALGQAWHPEHFVCAHCKEEIGSSPFFERTGLAYCSKDYHHLFSPR
Sbjct: 83  HCASCQKPIAGKMIHALGQAWHPEHFVCAHCKEEIGSSPFFERTGLAYCSKDYHHLFSPR 142

Query: 720 CAYCAAPILDKVLTAMDQTWHPEHFFCAHCGEVFGAE 830
           CAYCAAPILDKVLTAMDQTWHPEHFFCAHCGEVFGAE
Sbjct: 143 CAYCAAPILDKVLTAMDQTWHPEHFFCAHCGEVFGAE 179



 Score =  108 bits (271), Expect = 7e-24
 Identities = 45/93 (48%), Positives = 56/93 (60%)
 Frame = +3

Query: 720 CAYCAAPILDKVLTAMDQTWHPEHFFCAHCGEVFGAEGFHEKDKKPYCRKDFLAMFSPKC 899
           CA C  PI  K++ A+ Q WHPEHF CAHC E  G+  F E+    YC KD+  +FSP+C
Sbjct: 84  CASCQKPIAGKMIHALGQAWHPEHFVCAHCKEEIGSSPFFERTGLAYCSKDYHHLFSPRC 143

Query: 900 GGCNRPVLENYLSAMDTVWHPECFVCGDCFSSF 998
             C  P+L+  L+AMD  WHPE F C  C   F
Sbjct: 144 AYCAAPILDKVLTAMDQTWHPEHFFCAHCGEVF 176



 Score = 80.1 bits (196), Expect = 4e-15
 Identities = 32/89 (35%), Positives = 42/89 (47%)
 Frame = +3

Query: 897  CGGCNRPVLENYLSAMDTVWHPECFVCGDCFSSFSTGSFFELDGRPFCELHYHQRRGTLC 1076
            C  C +P+    + A+   WHPE FVC  C     +  FFE  G  +C   YH      C
Sbjct: 84   CASCQKPIAGKMIHALGQAWHPEHFVCAHCKEEIGSSPFFERTGLAYCSKDYHHLFSPRC 143

Query: 1077 HGCGQPITGRCISAMGYKFHPEHFVCDFC 1163
              C  PI  + ++AM   +HPEHF C  C
Sbjct: 144  AYCAAPILDKVLTAMDQTWHPEHFFCAHC 172



 Score = 54.3 bits (129), Expect = 2e-07
 Identities = 22/57 (38%), Positives = 32/57 (56%)
 Frame = +3

Query: 1074 CHGCGQPITGRCISAMGYKFHPEHFVCDFCLMQLSKGIFREQNDKTYCQPCFNKLFT 1244
            C  C +PI G+ I A+G  +HPEHFVC  C  ++    F E+    YC   ++ LF+
Sbjct: 84   CASCQKPIAGKMIHALGQAWHPEHFVCAHCKEEIGSSPFFERTGLAYCSKDYHHLFS 140


>ref|XP_003357122.1| PREDICTED: PDZ and LIM domain protein 5, partial [Sus scrofa].
          Length = 226

 Score =  155 bits (392), Expect = 7e-38
 Identities = 69/173 (39%), Positives = 90/173 (52%), Gaps = 2/173 (1%)
 Frame = +3

Query: 543  CASCQKPIAGKMIHALGQAWHPEHFVCAHCKEEIGSSPFFERTGLAYCSKDYHHLFSPRC 722
            CA C + I G  + ALG++WHPE F CAHCK  +    F E  G  YC   Y   F+P C
Sbjct: 50   CAHCNQVIRGPFLVALGKSWHPEEFNCAHCKNTMAYIGFVEEQGALYCELCYEKFFAPEC 109

Query: 723  AYCAAPILDKVLTAMDQTWHPEHFFCAHCGEVFGAEGFHEKDKKPYCRKDFLAMFSPKCG 902
              C   IL +V+ A+ QTWH   F C  CG+      FH +D +PYC  D+ A+F   C 
Sbjct: 110  GRCQRKILGEVINALKQTWHVSCFVCVACGKPIRNNVFHLEDGEPYCETDYYALFGTICH 169

Query: 903  GCNRPVL--ENYLSAMDTVWHPECFVCGDCFSSFSTGSFFELDGRPFCELHYH 1055
            GC  P+   + +L A+   WH  CFVC  C  S    +FF    +P C+ H H
Sbjct: 170  GCEFPIEAGDMFLEALGYTWHDTCFVCSVCCESLEGQTFFSKKDKPLCKKHAH 222



 Score =  137 bits (346), Expect = 1e-32
 Identities = 64/172 (37%), Positives = 85/172 (49%), Gaps = 2/172 (1%)
 Frame = +3

Query: 711  SPRCAYCAAPILDKVLTAMDQTWHPEHFFCAHCGEVFGAEGFHEKDKKPYCRKDFLAMFS 890
            +P CA+C   I    L A+ ++WHPE F CAHC       GF E+    YC   +   F+
Sbjct: 47   TPMCAHCNQVIRGPFLVALGKSWHPEEFNCAHCKNTMAYIGFVEEQGALYCELCYEKFFA 106

Query: 891  PKCGGCNRPVLENYLSAMDTVWHPECFVCGDCFSSFSTGSFFELDGRPFCELHYHQRRGT 1070
            P+CG C R +L   ++A+   WH  CFVC  C        F   DG P+CE  Y+   GT
Sbjct: 107  PECGRCQRKILGEVINALKQTWHVSCFVCVACGKPIRNNVFHLEDGEPYCETDYYALFGT 166

Query: 1071 LCHGCGQPITG--RCISAMGYKFHPEHFVCDFCLMQLSKGIFREQNDKTYCQ 1220
            +CHGC  PI      + A+GY +H   FVC  C   L    F  + DK  C+
Sbjct: 167  ICHGCEFPIEAGDMFLEALGYTWHDTCFVCSVCCESLEGQTFFSKKDKPLCK 218



 Score = 73.6 bits (179), Expect = 3e-13
 Identities = 36/118 (30%), Positives = 57/118 (48%)
 Frame = +3

Query: 888  SPKCGGCNRPVLENYLSAMDTVWHPECFVCGDCFSSFSTGSFFELDGRPFCELHYHQRRG 1067
            +P C  CN+ +   +L A+   WHPE F C  C ++ +   F E  G  +CEL Y +   
Sbjct: 47   TPMCAHCNQVIRGPFLVALGKSWHPEEFNCAHCKNTMAYIGFVEEQGALYCELCYEKFFA 106

Query: 1068 TLCHGCGQPITGRCISAMGYKFHPEHFVCDFCLMQLSKGIFREQNDKTYCQPCFNKLF 1241
              C  C + I G  I+A+   +H   FVC  C   +   +F  ++ + YC+  +  LF
Sbjct: 107  PECGRCQRKILGEVINALKQTWHVSCFVCVACGKPIRNNVFHLEDGEPYCETDYYALF 164


>ref|XP_003359314.1| PREDICTED: hypothetical protein LOC100151883 [Sus scrofa].
          Length = 715

 Score =  154 bits (390), Expect = 1e-37
 Identities = 66/173 (38%), Positives = 94/173 (54%), Gaps = 2/173 (1%)
 Frame = +3

Query: 543  CASCQKPIAGKMIHALGQAWHPEHFVCAHCKEEIGSSPFFERTGLAYCSKDYHHLFSPRC 722
            C  C   I G  + A+G++WHPE F CA+CK  +    F E     YC + Y   F+P C
Sbjct: 539  CGHCNSIIRGPFLVAMGRSWHPEEFNCAYCKTSLADVCFVEEQNNVYCERCYEQFFAPVC 598

Query: 723  AYCAAPILDKVLTAMDQTWHPEHFFCAHCGEVFGAEGFHEKDKKPYCRKDFLAMFSPKCG 902
            A C   I+ +V+ A+ QTWH   F CA C + FG   FH +D +PYC KD++ +FS KC 
Sbjct: 599  AKCNTKIMGEVMHALRQTWHTTCFVCAACKKPFGNSLFHMEDGEPYCEKDYVNLFSTKCH 658

Query: 903  GCNRPVL--ENYLSAMDTVWHPECFVCGDCFSSFSTGSFFELDGRPFCELHYH 1055
            GC+ PV   + ++ A+   WH  CF+C  C  +     F+    +P C+ H H
Sbjct: 659  GCDFPVEAGDKFIEALGHTWHDTCFICAVCHVNLEGQPFYSKKDKPLCKKHAH 711



 Score =  125 bits (315), Expect = 6e-29
 Identities = 58/172 (33%), Positives = 82/172 (47%), Gaps = 2/172 (1%)
 Frame = +3

Query: 711  SPRCAYCAAPILDKVLTAMDQTWHPEHFFCAHCGEVFGAEGFHEKDKKPYCRKDFLAMFS 890
            +P C +C + I    L AM ++WHPE F CA+C        F E+    YC + +   F+
Sbjct: 536  TPLCGHCNSIIRGPFLVAMGRSWHPEEFNCAYCKTSLADVCFVEEQNNVYCERCYEQFFA 595

Query: 891  PKCGGCNRPVLENYLSAMDTVWHPECFVCGDCFSSFSTGSFFELDGRPFCELHYHQRRGT 1070
            P C  CN  ++   + A+   WH  CFVC  C   F    F   DG P+CE  Y     T
Sbjct: 596  PVCAKCNTKIMGEVMHALRQTWHTTCFVCAACKKPFGNSLFHMEDGEPYCEKDYVNLFST 655

Query: 1071 LCHGCGQPITG--RCISAMGYKFHPEHFVCDFCLMQLSKGIFREQNDKTYCQ 1220
             CHGC  P+    + I A+G+ +H   F+C  C + L    F  + DK  C+
Sbjct: 656  KCHGCDFPVEAGDKFIEALGHTWHDTCFICAVCHVNLEGQPFYSKKDKPLCK 707



 Score = 74.7 bits (182), Expect = 2e-13
 Identities = 37/119 (31%), Positives = 54/119 (45%)
 Frame = +3

Query: 888  SPKCGGCNRPVLENYLSAMDTVWHPECFVCGDCFSSFSTGSFFELDGRPFCELHYHQRRG 1067
            +P CG CN  +   +L AM   WHPE F C  C +S +   F E     +CE  Y Q   
Sbjct: 536  TPLCGHCNSIIRGPFLVAMGRSWHPEEFNCAYCKTSLADVCFVEEQNNVYCERCYEQFFA 595

Query: 1068 TLCHGCGQPITGRCISAMGYKFHPEHFVCDFCLMQLSKGIFREQNDKTYCQPCFNKLFT 1244
             +C  C   I G  + A+   +H   FVC  C       +F  ++ + YC+  +  LF+
Sbjct: 596  PVCAKCNTKIMGEVMHALRQTWHTTCFVCAACKKPFGNSLFHMEDGEPYCEKDYVNLFS 654



 Score = 51.2 bits (121), Expect = 2e-06
 Identities = 22/60 (36%), Positives = 31/60 (51%)
 Frame = +3

Query: 1062 RGTLCHGCGQPITGRCISAMGYKFHPEHFVCDFCLMQLSKGIFREQNDKTYCQPCFNKLF 1241
            R  LC  C   I G  + AMG  +HPE F C +C   L+   F E+ +  YC+ C+ + F
Sbjct: 535  RTPLCGHCNSIIRGPFLVAMGRSWHPEEFNCAYCKTSLADVCFVEEQNNVYCERCYEQFF 594


>ref|NP_001230787.1| LIM and senescent cell antigen-like domains 1 [Sus scrofa].
          Length = 325

 Score =  135 bits (341), Expect = 5e-32
 Identities = 79/243 (32%), Positives = 120/243 (49%), Gaps = 11/243 (4%)
 Frame = +3

Query: 546  ASCQKPIAG-----KMIHALGQAWHPEHFVCAHCKEEIGSSPFFERTGLAYCSKDYHHLF 710
            ASC++   G     K++++ G+ +H + FVCA C ++     F+E  G  YC  D+  LF
Sbjct: 8    ASCERCRGGFAPAEKIVNSNGELYHEQCFVCAQCFQQFPEGLFYEFEGRKYCEHDFQMLF 67

Query: 711  SPRCAYCAAPILDKVLTAMDQTWHPEHFFCAHCGEVFGAEGFHEKDKKPYC-----RKDF 875
            +P C  C   I+ +V+ AM+ +WHPE F C  C EV    GF +   +  C     R+  
Sbjct: 68   APCCHQCGEFIIGRVIKAMNNSWHPECFRCDLCQEVLADIGFVKNAGRHLCRPCRNREKA 127

Query: 876  LAMFSPKCGGCNRPVLENYLSAMDTVWHPECFVCGDCFSSFSTGSFFELDGRPFCELHYH 1055
              +    C  C+  + E  L   +  +HP+ F C +C     T    EL G  +C L  H
Sbjct: 128  RGLGKYICQKCHAIIDEQPLIFKNDPYHPDHFNCANCGKEL-TADARELKGELYC-LPCH 185

Query: 1056 QRRGT-LCHGCGQPITGRCISAMGYKFHPEHFVCDFCLMQLSKGIFREQNDKTYCQPCFN 1232
             + G  +C  C +PI GR ++AMG ++H EHFVC  C          E+    YC+  +N
Sbjct: 186  DKMGVPICGACRRPIEGRVVNAMGKQWHVEHFVCAKCEKPFLGHRHYERKGLAYCETHYN 245

Query: 1233 KLF 1241
            +LF
Sbjct: 246  QLF 248



 Score =  133 bits (335), Expect = 3e-31
 Identities = 77/237 (32%), Positives = 111/237 (46%), Gaps = 6/237 (2%)
 Frame = +3

Query: 543  CASCQKPIAGKMIHALGQAWHPEHFVCAHCKEEIGSSPFFERTGLAYCS-----KDYHHL 707
            C  C + I G++I A+  +WHPE F C  C+E +    F +  G   C      +    L
Sbjct: 71   CHQCGEFIIGRVIKAMNNSWHPECFRCDLCQEVLADIGFVKNAGRHLCRPCRNREKARGL 130

Query: 708  FSPRCAYCAAPILDKVLTAMDQTWHPEHFFCAHCGEVFGAEGFHEKDKKPYCRKDFLAMF 887
                C  C A I ++ L   +  +HP+HF CA+CG+   A+   E   + YC      M 
Sbjct: 131  GKYICQKCHAIIDEQPLIFKNDPYHPDHFNCANCGKELTADA-RELKGELYCLPCHDKMG 189

Query: 888  SPKCGGCNRPVLENYLSAMDTVWHPECFVCGDCFSSFSTGSFFELDGRPFCELHYHQRRG 1067
             P CG C RP+    ++AM   WH E FVC  C   F     +E  G  +CE HY+Q  G
Sbjct: 190  VPICGACRRPIEGRVVNAMGKQWHVEHFVCAKCEKPFLGHRHYERKGLAYCETHYNQLFG 249

Query: 1068 TLCHGCGQPITGRCISAMGYKFHPEHFVCDFCLMQLS-KGIFREQNDKTYCQPCFNK 1235
             +C  C + I G  +SA+   +    F C  C  +L+ K  F E + K  C+ C+ K
Sbjct: 250  DVCFHCNRVIEGDVVSALNKAWCVSCFACSTCNTKLTLKNKFVEFDMKPVCKKCYEK 306


>ref|XP_003357126.1| PREDICTED: PDZ and LIM domain protein 5-like isoform 4 [Sus scrofa].
          Length = 486

 Score =  134 bits (338), Expect = 1e-31
 Identities = 66/175 (37%), Positives = 87/175 (49%), Gaps = 4/175 (2%)
 Frame = +3

Query: 543  CASCQKPIAGKMIHALGQAWHPEHFVCAHCKEEIGSSPFFERTGLAYCSKDYHHLFSPRC 722
            CA C + I G  + ALG++WHPE F CAHCK  +    F E  G  YC   Y   F+P C
Sbjct: 311  CAHCNQVIRGPFLVALGKSWHPEEFNCAHCKNTMAYIGFVEEQGALYCELCYEKFFAPEC 370

Query: 723  AYCAAPILDKVLTAMDQTWHPEHFFCAHCG--EVFGAEGFHEKDKKPYCRKDFLAMFSPK 896
              C   IL +V+ A+ Q   P  F    CG  +      FH +D +PYC  D+ A+F   
Sbjct: 371  GRCQRKILGEVINALKQ---PGMFLFCVCGCEKPIRNNVFHLEDGEPYCETDYYALFGTI 427

Query: 897  CGGCNRPVL--ENYLSAMDTVWHPECFVCGDCFSSFSTGSFFELDGRPFCELHYH 1055
            C GC  P+   + +L A+   WH  CFVC  C  S    +FF    +P C+ H H
Sbjct: 428  CHGCEFPIEAGDMFLEALGYTWHDTCFVCSVCCESLEGQTFFSKKDKPLCKKHAH 482



 Score =  118 bits (296), Expect = 9e-27
 Identities = 61/172 (35%), Positives = 82/172 (47%), Gaps = 2/172 (1%)
 Frame = +3

Query: 711  SPRCAYCAAPILDKVLTAMDQTWHPEHFFCAHCGEVFGAEGFHEKDKKPYCRKDFLAMFS 890
            +P CA+C   I    L A+ ++WHPE F CAHC       GF E+    YC   +   F+
Sbjct: 308  TPMCAHCNQVIRGPFLVALGKSWHPEEFNCAHCKNTMAYIGFVEEQGALYCELCYEKFFA 367

Query: 891  PKCGGCNRPVLENYLSAMDTVWHPECFVCGDCFSSFSTGSFFELDGRPFCELHYHQRRGT 1070
            P+CG C R +L   ++A+         VCG C        F   DG P+CE  Y+   GT
Sbjct: 368  PECGRCQRKILGEVINALKQPGMFLFCVCG-CEKPIRNNVFHLEDGEPYCETDYYALFGT 426

Query: 1071 LCHGCGQPITG--RCISAMGYKFHPEHFVCDFCLMQLSKGIFREQNDKTYCQ 1220
            +CHGC  PI      + A+GY +H   FVC  C   L    F  + DK  C+
Sbjct: 427  ICHGCEFPIEAGDMFLEALGYTWHDTCFVCSVCCESLEGQTFFSKKDKPLCK 478


>ref|XP_003357125.1| PREDICTED: PDZ and LIM domain protein 5-like isoform 3 [Sus scrofa].
          Length = 595

 Score =  134 bits (338), Expect = 1e-31
 Identities = 66/175 (37%), Positives = 87/175 (49%), Gaps = 4/175 (2%)
 Frame = +3

Query: 543  CASCQKPIAGKMIHALGQAWHPEHFVCAHCKEEIGSSPFFERTGLAYCSKDYHHLFSPRC 722
            CA C + I G  + ALG++WHPE F CAHCK  +    F E  G  YC   Y   F+P C
Sbjct: 420  CAHCNQVIRGPFLVALGKSWHPEEFNCAHCKNTMAYIGFVEEQGALYCELCYEKFFAPEC 479

Query: 723  AYCAAPILDKVLTAMDQTWHPEHFFCAHCG--EVFGAEGFHEKDKKPYCRKDFLAMFSPK 896
              C   IL +V+ A+ Q   P  F    CG  +      FH +D +PYC  D+ A+F   
Sbjct: 480  GRCQRKILGEVINALKQ---PGMFLFCVCGCEKPIRNNVFHLEDGEPYCETDYYALFGTI 536

Query: 897  CGGCNRPVL--ENYLSAMDTVWHPECFVCGDCFSSFSTGSFFELDGRPFCELHYH 1055
            C GC  P+   + +L A+   WH  CFVC  C  S    +FF    +P C+ H H
Sbjct: 537  CHGCEFPIEAGDMFLEALGYTWHDTCFVCSVCCESLEGQTFFSKKDKPLCKKHAH 591



 Score =  118 bits (296), Expect = 9e-27
 Identities = 61/172 (35%), Positives = 82/172 (47%), Gaps = 2/172 (1%)
 Frame = +3

Query: 711  SPRCAYCAAPILDKVLTAMDQTWHPEHFFCAHCGEVFGAEGFHEKDKKPYCRKDFLAMFS 890
            +P CA+C   I    L A+ ++WHPE F CAHC       GF E+    YC   +   F+
Sbjct: 417  TPMCAHCNQVIRGPFLVALGKSWHPEEFNCAHCKNTMAYIGFVEEQGALYCELCYEKFFA 476

Query: 891  PKCGGCNRPVLENYLSAMDTVWHPECFVCGDCFSSFSTGSFFELDGRPFCELHYHQRRGT 1070
            P+CG C R +L   ++A+         VCG C        F   DG P+CE  Y+   GT
Sbjct: 477  PECGRCQRKILGEVINALKQPGMFLFCVCG-CEKPIRNNVFHLEDGEPYCETDYYALFGT 535

Query: 1071 LCHGCGQPITG--RCISAMGYKFHPEHFVCDFCLMQLSKGIFREQNDKTYCQ 1220
            +CHGC  PI      + A+GY +H   FVC  C   L    F  + DK  C+
Sbjct: 536  ICHGCEFPIEAGDMFLEALGYTWHDTCFVCSVCCESLEGQTFFSKKDKPLCK 587


>ref|XP_003133450.2| PREDICTED: LIM and senescent cell antigen-like-containing domain
            protein 2-like isoform 1 [Sus scrofa].
          Length = 318

 Score =  125 bits (313), Expect = 1e-28
 Identities = 69/217 (31%), Positives = 98/217 (45%), Gaps = 5/217 (2%)
 Frame = +3

Query: 543  CASCQKPIAGKMIHALGQAWHPEHFVCAHCKEEIGSSPFFERTGLAYCSKDYHH-----L 707
            C SC + I G++I A+   WHP  F C  C  E+    F +  G   C   ++      L
Sbjct: 101  CGSCGEFIIGRVIKAMNNNWHPGCFRCELCDVELADLGFVKNAGRHLCRPCHNREKAKGL 160

Query: 708  FSPRCAYCAAPILDKVLTAMDQTWHPEHFFCAHCGEVFGAEGFHEKDKKPYCRKDFLAMF 887
                C  C   I ++ L   +  +HP+HF C HCG+   AE   E   + YC      M 
Sbjct: 161  GKYICQRCHLVIDEQPLMFRNDAYHPDHFNCTHCGKELTAEA-RELKGELYCLPCHDKMG 219

Query: 888  SPKCGGCNRPVLENYLSAMDTVWHPECFVCGDCFSSFSTGSFFELDGRPFCELHYHQRRG 1067
             P CG C RP+    ++A+   WH E FVC  C   F     +E  G  +CE HY+Q  G
Sbjct: 220  VPICGACRRPIEGRVVNALGKQWHVEHFVCAKCEKPFLGHRHYEKKGLAYCETHYNQLFG 279

Query: 1068 TLCHGCGQPITGRCISAMGYKFHPEHFVCDFCLMQLS 1178
             +C+ C   I G  +SA+   +    F C  C  +L+
Sbjct: 280  DVCYNCSHVIEGDVVSALNKAWCVNCFSCSTCNSRLT 316



 Score =  124 bits (311), Expect = 2e-28
 Identities = 74/241 (30%), Positives = 110/241 (45%), Gaps = 8/241 (3%)
 Frame = +3

Query: 543  CASCQKPIAG--KMIHALGQAWHPEHFVCAHCKEEIGSSPFFERTGLAYCSKDYHHLFSP 716
            C  CQ   A   +++++ G+ +H   FVCA C        F+E  G  YC  D+  LF+P
Sbjct: 40   CQRCQARFAPSERIVNSNGELYHEHCFVCAQCFRPFPEGLFYEFEGRKYCEHDFQMLFAP 99

Query: 717  RCAYCAAPILDKVLTAMDQTWHPEHFFCAHCGEVFGAEGFHEKDKKPYC-----RKDFLA 881
             C  C   I+ +V+ AM+  WHP  F C  C       GF +   +  C     R+    
Sbjct: 100  CCGSCGEFIIGRVIKAMNNNWHPGCFRCELCDVELADLGFVKNAGRHLCRPCHNREKAKG 159

Query: 882  MFSPKCGGCNRPVLENYLSAMDTVWHPECFVCGDCFSSFSTGSFFELDGRPFCELHYHQR 1061
            +    C  C+  + E  L   +  +HP+ F C  C     T    EL G  +C L  H +
Sbjct: 160  LGKYICQRCHLVIDEQPLMFRNDAYHPDHFNCTHCGKEL-TAEARELKGELYC-LPCHDK 217

Query: 1062 RGT-LCHGCGQPITGRCISAMGYKFHPEHFVCDFCLMQLSKGIFREQNDKTYCQPCFNKL 1238
             G  +C  C +PI GR ++A+G ++H EHFVC  C          E+    YC+  +N+L
Sbjct: 218  MGVPICGACRRPIEGRVVNALGKQWHVEHFVCAKCEKPFLGHRHYEKKGLAYCETHYNQL 277

Query: 1239 F 1241
            F
Sbjct: 278  F 278


>ref|XP_003359555.1| PREDICTED: LIM and senescent cell antigen-like-containing domain
            protein 2-like isoform 2 [Sus scrofa].
          Length = 293

 Score =  125 bits (313), Expect = 1e-28
 Identities = 69/217 (31%), Positives = 98/217 (45%), Gaps = 5/217 (2%)
 Frame = +3

Query: 543  CASCQKPIAGKMIHALGQAWHPEHFVCAHCKEEIGSSPFFERTGLAYCSKDYHH-----L 707
            C SC + I G++I A+   WHP  F C  C  E+    F +  G   C   ++      L
Sbjct: 76   CGSCGEFIIGRVIKAMNNNWHPGCFRCELCDVELADLGFVKNAGRHLCRPCHNREKAKGL 135

Query: 708  FSPRCAYCAAPILDKVLTAMDQTWHPEHFFCAHCGEVFGAEGFHEKDKKPYCRKDFLAMF 887
                C  C   I ++ L   +  +HP+HF C HCG+   AE   E   + YC      M 
Sbjct: 136  GKYICQRCHLVIDEQPLMFRNDAYHPDHFNCTHCGKELTAEA-RELKGELYCLPCHDKMG 194

Query: 888  SPKCGGCNRPVLENYLSAMDTVWHPECFVCGDCFSSFSTGSFFELDGRPFCELHYHQRRG 1067
             P CG C RP+    ++A+   WH E FVC  C   F     +E  G  +CE HY+Q  G
Sbjct: 195  VPICGACRRPIEGRVVNALGKQWHVEHFVCAKCEKPFLGHRHYEKKGLAYCETHYNQLFG 254

Query: 1068 TLCHGCGQPITGRCISAMGYKFHPEHFVCDFCLMQLS 1178
             +C+ C   I G  +SA+   +    F C  C  +L+
Sbjct: 255  DVCYNCSHVIEGDVVSALNKAWCVNCFSCSTCNSRLT 291



 Score =  124 bits (311), Expect = 2e-28
 Identities = 74/241 (30%), Positives = 110/241 (45%), Gaps = 8/241 (3%)
 Frame = +3

Query: 543  CASCQKPIAG--KMIHALGQAWHPEHFVCAHCKEEIGSSPFFERTGLAYCSKDYHHLFSP 716
            C  CQ   A   +++++ G+ +H   FVCA C        F+E  G  YC  D+  LF+P
Sbjct: 15   CQRCQARFAPSERIVNSNGELYHEHCFVCAQCFRPFPEGLFYEFEGRKYCEHDFQMLFAP 74

Query: 717  RCAYCAAPILDKVLTAMDQTWHPEHFFCAHCGEVFGAEGFHEKDKKPYC-----RKDFLA 881
             C  C   I+ +V+ AM+  WHP  F C  C       GF +   +  C     R+    
Sbjct: 75   CCGSCGEFIIGRVIKAMNNNWHPGCFRCELCDVELADLGFVKNAGRHLCRPCHNREKAKG 134

Query: 882  MFSPKCGGCNRPVLENYLSAMDTVWHPECFVCGDCFSSFSTGSFFELDGRPFCELHYHQR 1061
            +    C  C+  + E  L   +  +HP+ F C  C     T    EL G  +C L  H +
Sbjct: 135  LGKYICQRCHLVIDEQPLMFRNDAYHPDHFNCTHCGKEL-TAEARELKGELYC-LPCHDK 192

Query: 1062 RGT-LCHGCGQPITGRCISAMGYKFHPEHFVCDFCLMQLSKGIFREQNDKTYCQPCFNKL 1238
             G  +C  C +PI GR ++A+G ++H EHFVC  C          E+    YC+  +N+L
Sbjct: 193  MGVPICGACRRPIEGRVVNALGKQWHVEHFVCAKCEKPFLGHRHYEKKGLAYCETHYNQL 252

Query: 1239 F 1241
            F
Sbjct: 253  F 253


>ref|NP_999540.1| four and a half LIM domains 1 protein, isoform C [Sus scrofa].
          Length = 296

 Score =  124 bits (310), Expect = 2e-28
 Identities = 68/241 (28%), Positives = 102/241 (42%), Gaps = 9/241 (3%)
 Frame = +3

Query: 543  CASCQKPIAG--KMIHALGQAWHPEHFVCAHCKEEIGSSPFFERTGLAYCSKDYHHLFSP 716
            C  C+KPI    K +H   + WH   F C+ C   + +  F  +     C+K      SP
Sbjct: 56   CVECRKPIGADSKEVHYKNRYWHDTCFRCSKCLHPLANETFMAKDNKILCNKCTTREDSP 115

Query: 717  RCAYCAAPIL--DKVLTAMDQTWHPEHFFCAHCGEVFGAEGFHEKDKKPYCRKDFLAMFS 890
            +C  C  PI+  D+ +      WH + F C++C +V G   F  K +  YC       F+
Sbjct: 116  KCKGCFKPIVAGDQNVEYKGTVWHKDCFTCSNCKQVIGTGSFFPKGEDFYCVTCHETKFA 175

Query: 891  PKCGGCNRPVLENYLSAMDTVWHPECFVCGDCFSSFSTGSFFELDGRPFCELHYHQRRGT 1070
              C  CN+ +    ++  D  WH ECFVC  C    +   F  ++ + +C   Y      
Sbjct: 176  KHCVKCNKAITSGGITYQDQPWHAECFVCVTCSKKLAGQRFTAVEDQYYCVDCYKNFVAK 235

Query: 1071 LCHGCGQPITG-----RCISAMGYKFHPEHFVCDFCLMQLSKGIFREQNDKTYCQPCFNK 1235
             C GC  PITG       ++  G  +H   F C  C + L+   F    ++ YC  C  K
Sbjct: 236  KCAGCKNPITGFGKGSSVVAYEGQSWHDYCFHCKKCSVNLANKRFVFHQEQVYCPDCAKK 295

Query: 1236 L 1238
            L
Sbjct: 296  L 296



 Score =  110 bits (276), Expect = 2e-24
 Identities = 62/211 (29%), Positives = 92/211 (43%), Gaps = 4/211 (1%)
 Frame = +3

Query: 609  EHFVCAHCKEEIGSSPFFERTGLAYCSKDYHHLFSPRCAYCAAPI--LDKVLTAMDQTWH 782
            E F C +C++ +    + ++ G   C K +    +  C  C  PI    K +   ++ WH
Sbjct: 19   EKFDCHYCRDPLQGKKYVQKDGHHCCLKCFDKFCANTCVECRKPIGADSKEVHYKNRYWH 78

Query: 783  PEHFFCAHCGEVFGAEGFHEKDKKPYCRKDFLAMFSPKCGGCNRPVL--ENYLSAMDTVW 956
               F C+ C      E F  KD K  C K      SPKC GC +P++  +  +    TVW
Sbjct: 79   DTCFRCSKCLHPLANETFMAKDNKILCNKCTTREDSPKCKGCFKPIVAGDQNVEYKGTVW 138

Query: 957  HPECFVCGDCFSSFSTGSFFELDGRPFCELHYHQRRGTLCHGCGQPITGRCISAMGYKFH 1136
            H +CF C +C     TGSFF      +C   +  +    C  C + IT   I+     +H
Sbjct: 139  HKDCFTCSNCKQVIGTGSFFPKGEDFYCVTCHETKFAKHCVKCNKAITSGGITYQDQPWH 198

Query: 1137 PEHFVCDFCLMQLSKGIFREQNDKTYCQPCF 1229
             E FVC  C  +L+   F    D+ YC  C+
Sbjct: 199  AECFVCVTCSKKLAGQRFTAVEDQYYCVDCY 229



 Score = 65.1 bits (157), Expect = 1e-10
 Identities = 37/158 (23%), Positives = 60/158 (37%), Gaps = 4/158 (2%)
 Frame = +3

Query: 786  EHFFCAHCGEVFGAEGFHEKDKKPYCRKDFLAMFSPKCGGCNRPVLENYLSA--MDTVWH 959
            E F C +C +    + + +KD    C K F    +  C  C +P+  +       +  WH
Sbjct: 19   EKFDCHYCRDPLQGKKYVQKDGHHCCLKCFDKFCANTCVECRKPIGADSKEVHYKNRYWH 78

Query: 960  PECFVCGDCFSSFSTGSFFELDGRPFCELHYHQRRGTLCHGCGQPITG--RCISAMGYKF 1133
              CF C  C    +  +F   D +  C     +     C GC +PI    + +   G  +
Sbjct: 79   DTCFRCSKCLHPLANETFMAKDNKILCNKCTTREDSPKCKGCFKPIVAGDQNVEYKGTVW 138

Query: 1134 HPEHFVCDFCLMQLSKGIFREQNDKTYCQPCFNKLFTQ 1247
            H + F C  C   +  G F  + +  YC  C    F +
Sbjct: 139  HKDCFTCSNCKQVIGTGSFFPKGEDFYCVTCHETKFAK 176



 Score = 61.2 bits (147), Expect = 2e-09
 Identities = 33/113 (29%), Positives = 44/113 (38%), Gaps = 5/113 (4%)
 Frame = +3

Query: 540 HCASCQKPIAGKMIHALGQAWHPEHFVCAHCKEEIGSSPFFERTGLAYCSKDYHHLFSPR 719
           HC  C K I    I    Q WH E FVC  C +++    F       YC   Y +  + +
Sbjct: 177 HCVKCNKAITSGGITYQDQPWHAECFVCVTCSKKLAGQRFTAVEDQYYCVDCYKNFVAKK 236

Query: 720 CAYCAAPIL-----DKVLTAMDQTWHPEHFFCAHCGEVFGAEGFHEKDKKPYC 863
           CA C  PI        V+    Q+WH   F C  C      + F    ++ YC
Sbjct: 237 CAGCKNPITGFGKGSSVVAYEGQSWHDYCFHCKKCSVNLANKRFVFHQEQVYC 289


>ref|NP_001230243.1| four and a half LIM domains protein 5 [Sus scrofa].
          Length = 284

 Score =  120 bits (302), Expect = 2e-27
 Identities = 67/237 (28%), Positives = 99/237 (41%), Gaps = 8/237 (3%)
 Frame = +3

Query: 540  HCASCQKPIAG--KMIHALGQAWHPEHFVCAHCKEEIGSSPFFERTGLAYCSKDYHHLFS 713
            +C  C++PI    K +   G+ WH   F CA C   +   PF  +     CS+ Y +  S
Sbjct: 40   YCEECKEPIESDSKDLCYKGRHWHEGCFNCAKCNHSLVEKPFAAKDERLLCSECYSNECS 99

Query: 714  PRCAYCAAPIL--DKVLTAMDQTWHPEHFFCAHCGEVFGAEGFHEKDKKPYCRKDFLAMF 887
             +C +C   I+   + +      WH   F C HC +  G +    K+   YC   F   F
Sbjct: 100  SKCFHCKRTIMPGSRKMEFKGNYWHETCFVCEHCRQPIGTKPLISKENGNYCVPCFEKEF 159

Query: 888  SPKCGGCNRPVLENYLSAMDTVWHPECFVCGDCFSSFSTGSFFELDGRPFCELHYHQRRG 1067
            +  C  C + +    ++  D  WH ECF+C  C        F   D  PFC   Y+    
Sbjct: 160  AHYCSFCKKVITSGGITFHDQPWHKECFLCSGCRKELCEEEFMSKDDYPFCLDCYNHLYA 219

Query: 1068 TLCHGCGQPITG----RCISAMGYKFHPEHFVCDFCLMQLSKGIFREQNDKTYCQPC 1226
              C  C +PITG    + I     ++H E F C  C + L    F  QN + +C+ C
Sbjct: 220  KKCSACTKPITGLRGAKFICFQDRQWHSECFNCGKCSVSLVGEGFLTQNKEIFCRKC 276



 Score = 95.1 bits (235), Expect = 1e-19
 Identities = 55/215 (25%), Positives = 85/215 (39%), Gaps = 4/215 (1%)
 Frame = +3

Query: 615  FVCAHCKEEIGSSPFFERTGLAYCSKDYHHLFSPRCAYCAAPILD--KVLTAMDQTWHPE 788
            F C +C   +    +  +    YC   Y  +FS  C  C  PI    K L    + WH  
Sbjct: 6    FDCQYCTASLLGKKYVLKDDNPYCVSCYDRIFSNYCEECKEPIESDSKDLCYKGRHWHEG 65

Query: 789  HFFCAHCGEVFGAEGFHEKDKKPYCRKDFLAMFSPKCGGCNRPVL--ENYLSAMDTVWHP 962
             F CA C      + F  KD++  C + +    S KC  C R ++     +      WH 
Sbjct: 66   CFNCAKCNHSLVEKPFAAKDERLLCSECYSNECSSKCFHCKRTIMPGSRKMEFKGNYWHE 125

Query: 963  ECFVCGDCFSSFSTGSFFELDGRPFCELHYHQRRGTLCHGCGQPITGRCISAMGYKFHPE 1142
             CFVC  C     T      +   +C   + +     C  C + IT   I+     +H E
Sbjct: 126  TCFVCEHCRQPIGTKPLISKENGNYCVPCFEKEFAHYCSFCKKVITSGGITFHDQPWHKE 185

Query: 1143 HFVCDFCLMQLSKGIFREQNDKTYCQPCFNKLFTQ 1247
             F+C  C  +L +  F  ++D  +C  C+N L+ +
Sbjct: 186  CFLCSGCRKELCEEEFMSKDDYPFCLDCYNHLYAK 220


  Database: RefSeq49_SP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 11,343,932
  Number of sequences in database:  24,897
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 24897
Number of Hits to DB: 44,001,943
Number of extensions: 1230006
Number of successful extensions: 5067
Number of sequences better than 1.0e-05: 48
Number of HSP's gapped: 4780
Number of HSP's successfully gapped: 129
Length of query: 583
Length of database: 11,343,932
Length adjustment: 104
Effective length of query: 479
Effective length of database: 8,754,644
Effective search space: 4193474476
Effective search space used: 4193474476
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-013458
         (1751 letters)

Database: RefSeq49_MP.fasta 
           30,036 sequences; 15,617,559 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_598913.1| leupaxin [Mus musculus].                             613   e-175
Alignment   gi|NP_035353.1| paxillin isoform alpha [Mus musculus].               418   e-117
Alignment   gi|NP_598676.2| paxillin isoform beta [Mus musculus].                412   e-115
Alignment   gi|NP_033391.1| transforming growth factor beta-1-induced trans...   350   2e-96
Alignment   gi|NP_001177785.1| PDZ and LIM domain protein 5 isoform ENH1d [...   155   9e-38
Alignment   gi|NP_001177784.1| PDZ and LIM domain protein 5 isoform ENH1c [...   155   9e-38
Alignment   gi|NP_001177783.1| PDZ and LIM domain protein 5 isoform ENH1b [...   155   9e-38
Alignment   gi|NP_001177781.1| PDZ and LIM domain protein 5 isoform ENH1e [...   155   9e-38
Alignment   gi|NP_001034163.1| LIM domain-binding protein 3 isoform e [Mus ...   155   9e-38
Alignment   gi|NP_001034162.1| LIM domain-binding protein 3 isoform d [Mus ...   155   9e-38

>ref|NP_598913.1| leupaxin [Mus musculus].
          Length = 386

 Score =  613 bits (1581), Expect = e-175
 Identities = 282/372 (75%), Positives = 309/372 (83%)
 Frame = +3

Query: 132  TLQESDEYDSPASLSLDGHSKKESDLAETSKVPSAQDDTSSFSVQLVYTTNIQEPRVYSE 311
            T Q+S+EY +P S  LD  S +ES + +T K  S+Q +TS   VQLVY TNIQEP VYSE
Sbjct: 15   TFQDSEEYSNPVSCHLDQQSTEESKIPQTPKTLSSQGNTSPLKVQLVYATNIQEPNVYSE 74

Query: 312  VQXXXXXXXXXXXXXXAQLDELMAHLCEMQIQCTVKADASTKHLPEKQDPKTSLDSMXXX 491
            VQ              AQLDELMAHL EMQ + +VKAD S K LP++QD K SLDSM   
Sbjct: 75   VQEPKESVLPPKTSAAAQLDELMAHLSEMQAKVSVKADTSRKPLPDQQDHKASLDSMLGD 134

Query: 492  XXXXXXXXXIATVPKGHCASCQKPIAGKMIHALGQAWHPEHFVCAHCKEEIGSSPFFERT 671
                     IATVPKG+CASCQKPIAGK+IHALGQ+WHPEHFVC HCKEE+GSSPFFER+
Sbjct: 135  LEQELQDLGIATVPKGYCASCQKPIAGKVIHALGQSWHPEHFVCTHCKEELGSSPFFERS 194

Query: 672  GLAYCSKDYHHLFSPRCAYCAAPILDKVLTAMDQTWHPEHFFCAHCGEVFGAEGFHEKDK 851
            GLAYCSKDYH LFSPRCAYCAAPI DKVLTAM++TWHPEHFFC+HCGEVFGAEGFHEKDK
Sbjct: 195  GLAYCSKDYHRLFSPRCAYCAAPITDKVLTAMNKTWHPEHFFCSHCGEVFGAEGFHEKDK 254

Query: 852  KPYCRKDFLAMFSPKCGGCNRPVLENYLSAMDTVWHPECFVCGDCFSSFSTGSFFELDGR 1031
            KPYCRKDFLAMFSPKCGGCNRPVLENYLSAM+TVWHPECFVCGDCFSSFS+GSFFELDGR
Sbjct: 255  KPYCRKDFLAMFSPKCGGCNRPVLENYLSAMNTVWHPECFVCGDCFSSFSSGSFFELDGR 314

Query: 1032 PFCELHYHQRRGTLCHGCGQPITGRCISAMGYKFHPEHFVCDFCLMQLSKGIFREQNDKT 1211
            PFCELHYH RRGTLCH CGQPITGRCISAMG+KFHPEHFVC FCL QL KGIF+EQN+KT
Sbjct: 315  PFCELHYHHRRGTLCHDCGQPITGRCISAMGHKFHPEHFVCAFCLTQLPKGIFKEQNNKT 374

Query: 1212 YCQPCFNKLFTQ 1247
            YC+ CF KLF+Q
Sbjct: 375  YCEKCFTKLFSQ 386


>ref|NP_035353.1| paxillin isoform alpha [Mus musculus].
          Length = 557

 Score =  418 bits (1075), Expect = e-117
 Identities = 184/293 (62%), Positives = 220/293 (75%)
 Frame = +3

Query: 363  QLDELMAHLCEMQIQCTVKADASTKHLPEKQDPKTSLDSMXXXXXXXXXXXXIATVPKGH 542
            +LDELMA L + +     K  +S+        P + LDSM            +ATV KG 
Sbjct: 265  ELDELMASLSDFKFMAQGKTGSSSPP-GGLSKPGSQLDSMLGSLQSDLNKLGVATVAKGV 323

Query: 543  CASCQKPIAGKMIHALGQAWHPEHFVCAHCKEEIGSSPFFERTGLAYCSKDYHHLFSPRC 722
            C +C+KPIAG+++ A+G+ WHPEHFVC HC+EEIGS  FFER G  YC KDYH LFSPRC
Sbjct: 324  CGACKKPIAGQVVTAMGKTWHPEHFVCTHCQEEIGSRNFFERDGQPYCEKDYHSLFSPRC 383

Query: 723  AYCAAPILDKVLTAMDQTWHPEHFFCAHCGEVFGAEGFHEKDKKPYCRKDFLAMFSPKCG 902
             YC  PILDKV+TA+D+TWHPEHFFCA CG  FG EGFHEKD K YCRKD+  MF+PKCG
Sbjct: 384  YYCNGPILDKVVTALDRTWHPEHFFCAQCGAFFGPEGFHEKDGKAYCRKDYFDMFAPKCG 443

Query: 903  GCNRPVLENYLSAMDTVWHPECFVCGDCFSSFSTGSFFELDGRPFCELHYHQRRGTLCHG 1082
            GC R +LENY+SA++T+WHPECFVC +CF+ F  GSFFE DG+P+CE+HYH+RRG+LC G
Sbjct: 444  GCARAILENYISALNTLWHPECFVCRECFTPFVNGSFFEHDGQPYCEVHYHERRGSLCSG 503

Query: 1083 CGQPITGRCISAMGYKFHPEHFVCDFCLMQLSKGIFREQNDKTYCQPCFNKLF 1241
            C +PITGRCI+AM  KFHPEHFVC FCL QL+KG F+EQNDK YCQ CF KLF
Sbjct: 504  CQKPITGRCITAMAKKFHPEHFVCAFCLKQLNKGTFKEQNDKPYCQSCFVKLF 556



 Score = 57.4 bits (137), Expect = 3e-08
 Identities = 22/58 (37%), Positives = 37/58 (63%)
 Frame = +3

Query: 1071 LCHGCGQPITGRCISAMGYKFHPEHFVCDFCLMQLSKGIFREQNDKTYCQPCFNKLFT 1244
            +C  C +PI G+ ++AMG  +HPEHFVC  C  ++    F E++ + YC+  ++ LF+
Sbjct: 323  VCGACKKPIAGQVVTAMGKTWHPEHFVCTHCQEEIGSRNFFERDGQPYCEKDYHSLFS 380


>ref|NP_598676.2| paxillin isoform beta [Mus musculus].
          Length = 591

 Score =  412 bits (1058), Expect = e-115
 Identities = 188/326 (57%), Positives = 226/326 (69%), Gaps = 33/326 (10%)
 Frame = +3

Query: 363  QLDELMAHLCEMQIQCTVKA------------DASTKHLPEKQD---------------- 458
            +LDELMA L + ++Q   +              +S +  PE QD                
Sbjct: 265  ELDELMASLSDFKMQGLEQRVDGERPWAASWPPSSRQSSPEGQDEGGFMAQGKTGSSSPP 324

Query: 459  -----PKTSLDSMXXXXXXXXXXXXIATVPKGHCASCQKPIAGKMIHALGQAWHPEHFVC 623
                 P + LDSM            +ATV KG C +C+KPIAG+++ A+G+ WHPEHFVC
Sbjct: 325  GGLSKPGSQLDSMLGSLQSDLNKLGVATVAKGVCGACKKPIAGQVVTAMGKTWHPEHFVC 384

Query: 624  AHCKEEIGSSPFFERTGLAYCSKDYHHLFSPRCAYCAAPILDKVLTAMDQTWHPEHFFCA 803
             HC+EEIGS  FFER G  YC KDYH LFSPRC YC  PILDKV+TA+D+TWHPEHFFCA
Sbjct: 385  THCQEEIGSRNFFERDGQPYCEKDYHSLFSPRCYYCNGPILDKVVTALDRTWHPEHFFCA 444

Query: 804  HCGEVFGAEGFHEKDKKPYCRKDFLAMFSPKCGGCNRPVLENYLSAMDTVWHPECFVCGD 983
             CG  FG EGFHEKD K YCRKD+  MF+PKCGGC R +LENY+SA++T+WHPECFVC +
Sbjct: 445  QCGAFFGPEGFHEKDGKAYCRKDYFDMFAPKCGGCARAILENYISALNTLWHPECFVCRE 504

Query: 984  CFSSFSTGSFFELDGRPFCELHYHQRRGTLCHGCGQPITGRCISAMGYKFHPEHFVCDFC 1163
            CF+ F  GSFFE DG+P+CE+HYH+RRG+LC GC +PITGRCI+AM  KFHPEHFVC FC
Sbjct: 505  CFTPFVNGSFFEHDGQPYCEVHYHERRGSLCSGCQKPITGRCITAMAKKFHPEHFVCAFC 564

Query: 1164 LMQLSKGIFREQNDKTYCQPCFNKLF 1241
            L QL+KG F+EQNDK YCQ CF KLF
Sbjct: 565  LKQLNKGTFKEQNDKPYCQSCFVKLF 590



 Score = 57.4 bits (137), Expect = 3e-08
 Identities = 22/58 (37%), Positives = 37/58 (63%)
 Frame = +3

Query: 1071 LCHGCGQPITGRCISAMGYKFHPEHFVCDFCLMQLSKGIFREQNDKTYCQPCFNKLFT 1244
            +C  C +PI G+ ++AMG  +HPEHFVC  C  ++    F E++ + YC+  ++ LF+
Sbjct: 357  VCGACKKPIAGQVVTAMGKTWHPEHFVCTHCQEEIGSRNFFERDGQPYCEKDYHSLFS 414


>ref|NP_033391.1| transforming growth factor beta-1-induced transcript 1 protein [Mus
            musculus].
          Length = 444

 Score =  350 bits (899), Expect = 2e-96
 Identities = 152/304 (50%), Positives = 201/304 (66%), Gaps = 11/304 (3%)
 Frame = +3

Query: 363  QLDELMAHLCEMQIQCTVKADASTKH-----------LPEKQDPKTSLDSMXXXXXXXXX 509
            +LD LMA L + ++Q  + A    +             P  Q  K SLD+M         
Sbjct: 140  ELDRLMASLSDFRVQNHLPASGPPQPPAASPTREGCPSPPGQTSKGSLDTMLGLLQSDLS 199

Query: 510  XXXIATVPKGHCASCQKPIAGKMIHALGQAWHPEHFVCAHCKEEIGSSPFFERTGLAYCS 689
               + T  KG C SC KPIAG+++ ALG+AWHPEHF+C+ C   +G S FFE+ G  +C 
Sbjct: 200  RRGVPTQAKGLCGSCNKPIAGQVVTALGRAWHPEHFLCSGCSTTLGGSSFFEKDGAPFCP 259

Query: 690  KDYHHLFSPRCAYCAAPILDKVLTAMDQTWHPEHFFCAHCGEVFGAEGFHEKDKKPYCRK 869
            + Y   FSPRC +C  PI  K++TA+   WHPEHF C  CGE FG EGFHE++ +PYCR+
Sbjct: 260  ECYFERFSPRCGFCNQPIRHKMVTALGTHWHPEHFCCVSCGEPFGEEGFHEREGRPYCRR 319

Query: 870  DFLAMFSPKCGGCNRPVLENYLSAMDTVWHPECFVCGDCFSSFSTGSFFELDGRPFCELH 1049
            DFL +F+P+C GC  P+L+NY+SA+  +WHP+CFVC +C + FS GSFFE +GRP CE H
Sbjct: 320  DFLQLFAPRCQGCQGPILDNYISALSALWHPDCFVCRECLAPFSGGSFFEHEGRPLCENH 379

Query: 1050 YHQRRGTLCHGCGQPITGRCISAMGYKFHPEHFVCDFCLMQLSKGIFREQNDKTYCQPCF 1229
            +H +RG+LC  CG P+TGRC+SA+G +FHP+HF C FCL  L+KG F+E+  K YCQPCF
Sbjct: 380  FHAQRGSLCATCGLPVTGRCVSALGRRFHPDHFTCTFCLRPLTKGSFQERASKPYCQPCF 439

Query: 1230 NKLF 1241
             KLF
Sbjct: 440  LKLF 443



 Score = 54.7 bits (130), Expect = 2e-07
 Identities = 21/58 (36%), Positives = 34/58 (58%)
 Frame = +3

Query: 1071 LCHGCGQPITGRCISAMGYKFHPEHFVCDFCLMQLSKGIFREQNDKTYCQPCFNKLFT 1244
            LC  C +PI G+ ++A+G  +HPEHF+C  C   L    F E++   +C  C+ + F+
Sbjct: 210  LCGSCNKPIAGQVVTALGRAWHPEHFLCSGCSTTLGGSSFFEKDGAPFCPECYFERFS 267


>ref|NP_001177785.1| PDZ and LIM domain protein 5 isoform ENH1d [Mus musculus].
          Length = 574

 Score =  155 bits (392), Expect = 9e-38
 Identities = 69/173 (39%), Positives = 90/173 (52%), Gaps = 2/173 (1%)
 Frame = +3

Query: 543  CASCQKPIAGKMIHALGQAWHPEHFVCAHCKEEIGSSPFFERTGLAYCSKDYHHLFSPRC 722
            CA C + I G  + ALG++WHPE F CAHCK  +    F E  G  YC   Y   F+P C
Sbjct: 398  CAHCNQVIRGPFLVALGKSWHPEEFNCAHCKNTMAYIGFVEEKGALYCELCYEKFFAPEC 457

Query: 723  AYCAAPILDKVLTAMDQTWHPEHFFCAHCGEVFGAEGFHEKDKKPYCRKDFLAMFSPKCG 902
              C   IL +V+ A+ QTWH   F C  CG+      FH +D +PYC  D+ A+F   C 
Sbjct: 458  GRCQRKILGEVINALKQTWHVSCFVCVACGKPIRNNVFHLEDGEPYCETDYYALFGTICR 517

Query: 903  GCNRPVL--ENYLSAMDTVWHPECFVCGDCFSSFSTGSFFELDGRPFCELHYH 1055
            GC  P+   + +L A+   WH  CFVC  C  S    +FF    +P C+ H H
Sbjct: 518  GCEFPIEAGDMFLEALGYTWHDTCFVCSVCCESLEGQTFFSKKDKPLCKKHAH 570



 Score =  134 bits (337), Expect = 2e-31
 Identities = 63/172 (36%), Positives = 84/172 (48%), Gaps = 2/172 (1%)
 Frame = +3

Query: 711  SPRCAYCAAPILDKVLTAMDQTWHPEHFFCAHCGEVFGAEGFHEKDKKPYCRKDFLAMFS 890
            +P CA+C   I    L A+ ++WHPE F CAHC       GF E+    YC   +   F+
Sbjct: 395  TPMCAHCNQVIRGPFLVALGKSWHPEEFNCAHCKNTMAYIGFVEEKGALYCELCYEKFFA 454

Query: 891  PKCGGCNRPVLENYLSAMDTVWHPECFVCGDCFSSFSTGSFFELDGRPFCELHYHQRRGT 1070
            P+CG C R +L   ++A+   WH  CFVC  C        F   DG P+CE  Y+   GT
Sbjct: 455  PECGRCQRKILGEVINALKQTWHVSCFVCVACGKPIRNNVFHLEDGEPYCETDYYALFGT 514

Query: 1071 LCHGCGQPITG--RCISAMGYKFHPEHFVCDFCLMQLSKGIFREQNDKTYCQ 1220
            +C GC  PI      + A+GY +H   FVC  C   L    F  + DK  C+
Sbjct: 515  ICRGCEFPIEAGDMFLEALGYTWHDTCFVCSVCCESLEGQTFFSKKDKPLCK 566



 Score = 73.2 bits (178), Expect = 6e-13
 Identities = 36/118 (30%), Positives = 57/118 (48%)
 Frame = +3

Query: 888  SPKCGGCNRPVLENYLSAMDTVWHPECFVCGDCFSSFSTGSFFELDGRPFCELHYHQRRG 1067
            +P C  CN+ +   +L A+   WHPE F C  C ++ +   F E  G  +CEL Y +   
Sbjct: 395  TPMCAHCNQVIRGPFLVALGKSWHPEEFNCAHCKNTMAYIGFVEEKGALYCELCYEKFFA 454

Query: 1068 TLCHGCGQPITGRCISAMGYKFHPEHFVCDFCLMQLSKGIFREQNDKTYCQPCFNKLF 1241
              C  C + I G  I+A+   +H   FVC  C   +   +F  ++ + YC+  +  LF
Sbjct: 455  PECGRCQRKILGEVINALKQTWHVSCFVCVACGKPIRNNVFHLEDGEPYCETDYYALF 512


>ref|NP_001177784.1| PDZ and LIM domain protein 5 isoform ENH1c [Mus musculus].
          Length = 526

 Score =  155 bits (392), Expect = 9e-38
 Identities = 69/173 (39%), Positives = 90/173 (52%), Gaps = 2/173 (1%)
 Frame = +3

Query: 543  CASCQKPIAGKMIHALGQAWHPEHFVCAHCKEEIGSSPFFERTGLAYCSKDYHHLFSPRC 722
            CA C + I G  + ALG++WHPE F CAHCK  +    F E  G  YC   Y   F+P C
Sbjct: 350  CAHCNQVIRGPFLVALGKSWHPEEFNCAHCKNTMAYIGFVEEKGALYCELCYEKFFAPEC 409

Query: 723  AYCAAPILDKVLTAMDQTWHPEHFFCAHCGEVFGAEGFHEKDKKPYCRKDFLAMFSPKCG 902
              C   IL +V+ A+ QTWH   F C  CG+      FH +D +PYC  D+ A+F   C 
Sbjct: 410  GRCQRKILGEVINALKQTWHVSCFVCVACGKPIRNNVFHLEDGEPYCETDYYALFGTICR 469

Query: 903  GCNRPVL--ENYLSAMDTVWHPECFVCGDCFSSFSTGSFFELDGRPFCELHYH 1055
            GC  P+   + +L A+   WH  CFVC  C  S    +FF    +P C+ H H
Sbjct: 470  GCEFPIEAGDMFLEALGYTWHDTCFVCSVCCESLEGQTFFSKKDKPLCKKHAH 522



 Score =  134 bits (337), Expect = 2e-31
 Identities = 63/172 (36%), Positives = 84/172 (48%), Gaps = 2/172 (1%)
 Frame = +3

Query: 711  SPRCAYCAAPILDKVLTAMDQTWHPEHFFCAHCGEVFGAEGFHEKDKKPYCRKDFLAMFS 890
            +P CA+C   I    L A+ ++WHPE F CAHC       GF E+    YC   +   F+
Sbjct: 347  TPMCAHCNQVIRGPFLVALGKSWHPEEFNCAHCKNTMAYIGFVEEKGALYCELCYEKFFA 406

Query: 891  PKCGGCNRPVLENYLSAMDTVWHPECFVCGDCFSSFSTGSFFELDGRPFCELHYHQRRGT 1070
            P+CG C R +L   ++A+   WH  CFVC  C        F   DG P+CE  Y+   GT
Sbjct: 407  PECGRCQRKILGEVINALKQTWHVSCFVCVACGKPIRNNVFHLEDGEPYCETDYYALFGT 466

Query: 1071 LCHGCGQPITG--RCISAMGYKFHPEHFVCDFCLMQLSKGIFREQNDKTYCQ 1220
            +C GC  PI      + A+GY +H   FVC  C   L    F  + DK  C+
Sbjct: 467  ICRGCEFPIEAGDMFLEALGYTWHDTCFVCSVCCESLEGQTFFSKKDKPLCK 518



 Score = 73.2 bits (178), Expect = 6e-13
 Identities = 36/118 (30%), Positives = 57/118 (48%)
 Frame = +3

Query: 888  SPKCGGCNRPVLENYLSAMDTVWHPECFVCGDCFSSFSTGSFFELDGRPFCELHYHQRRG 1067
            +P C  CN+ +   +L A+   WHPE F C  C ++ +   F E  G  +CEL Y +   
Sbjct: 347  TPMCAHCNQVIRGPFLVALGKSWHPEEFNCAHCKNTMAYIGFVEEKGALYCELCYEKFFA 406

Query: 1068 TLCHGCGQPITGRCISAMGYKFHPEHFVCDFCLMQLSKGIFREQNDKTYCQPCFNKLF 1241
              C  C + I G  I+A+   +H   FVC  C   +   +F  ++ + YC+  +  LF
Sbjct: 407  PECGRCQRKILGEVINALKQTWHVSCFVCVACGKPIRNNVFHLEDGEPYCETDYYALF 464


>ref|NP_001177783.1| PDZ and LIM domain protein 5 isoform ENH1b [Mus musculus].
          Length = 482

 Score =  155 bits (392), Expect = 9e-38
 Identities = 69/173 (39%), Positives = 90/173 (52%), Gaps = 2/173 (1%)
 Frame = +3

Query: 543  CASCQKPIAGKMIHALGQAWHPEHFVCAHCKEEIGSSPFFERTGLAYCSKDYHHLFSPRC 722
            CA C + I G  + ALG++WHPE F CAHCK  +    F E  G  YC   Y   F+P C
Sbjct: 306  CAHCNQVIRGPFLVALGKSWHPEEFNCAHCKNTMAYIGFVEEKGALYCELCYEKFFAPEC 365

Query: 723  AYCAAPILDKVLTAMDQTWHPEHFFCAHCGEVFGAEGFHEKDKKPYCRKDFLAMFSPKCG 902
              C   IL +V+ A+ QTWH   F C  CG+      FH +D +PYC  D+ A+F   C 
Sbjct: 366  GRCQRKILGEVINALKQTWHVSCFVCVACGKPIRNNVFHLEDGEPYCETDYYALFGTICR 425

Query: 903  GCNRPVL--ENYLSAMDTVWHPECFVCGDCFSSFSTGSFFELDGRPFCELHYH 1055
            GC  P+   + +L A+   WH  CFVC  C  S    +FF    +P C+ H H
Sbjct: 426  GCEFPIEAGDMFLEALGYTWHDTCFVCSVCCESLEGQTFFSKKDKPLCKKHAH 478



 Score =  134 bits (337), Expect = 2e-31
 Identities = 63/172 (36%), Positives = 84/172 (48%), Gaps = 2/172 (1%)
 Frame = +3

Query: 711  SPRCAYCAAPILDKVLTAMDQTWHPEHFFCAHCGEVFGAEGFHEKDKKPYCRKDFLAMFS 890
            +P CA+C   I    L A+ ++WHPE F CAHC       GF E+    YC   +   F+
Sbjct: 303  TPMCAHCNQVIRGPFLVALGKSWHPEEFNCAHCKNTMAYIGFVEEKGALYCELCYEKFFA 362

Query: 891  PKCGGCNRPVLENYLSAMDTVWHPECFVCGDCFSSFSTGSFFELDGRPFCELHYHQRRGT 1070
            P+CG C R +L   ++A+   WH  CFVC  C        F   DG P+CE  Y+   GT
Sbjct: 363  PECGRCQRKILGEVINALKQTWHVSCFVCVACGKPIRNNVFHLEDGEPYCETDYYALFGT 422

Query: 1071 LCHGCGQPITG--RCISAMGYKFHPEHFVCDFCLMQLSKGIFREQNDKTYCQ 1220
            +C GC  PI      + A+GY +H   FVC  C   L    F  + DK  C+
Sbjct: 423  ICRGCEFPIEAGDMFLEALGYTWHDTCFVCSVCCESLEGQTFFSKKDKPLCK 474



 Score = 73.2 bits (178), Expect = 6e-13
 Identities = 36/118 (30%), Positives = 57/118 (48%)
 Frame = +3

Query: 888  SPKCGGCNRPVLENYLSAMDTVWHPECFVCGDCFSSFSTGSFFELDGRPFCELHYHQRRG 1067
            +P C  CN+ +   +L A+   WHPE F C  C ++ +   F E  G  +CEL Y +   
Sbjct: 303  TPMCAHCNQVIRGPFLVALGKSWHPEEFNCAHCKNTMAYIGFVEEKGALYCELCYEKFFA 362

Query: 1068 TLCHGCGQPITGRCISAMGYKFHPEHFVCDFCLMQLSKGIFREQNDKTYCQPCFNKLF 1241
              C  C + I G  I+A+   +H   FVC  C   +   +F  ++ + YC+  +  LF
Sbjct: 363  PECGRCQRKILGEVINALKQTWHVSCFVCVACGKPIRNNVFHLEDGEPYCETDYYALF 420


>ref|NP_001177781.1| PDZ and LIM domain protein 5 isoform ENH1e [Mus musculus].
          Length = 614

 Score =  155 bits (392), Expect = 9e-38
 Identities = 69/173 (39%), Positives = 90/173 (52%), Gaps = 2/173 (1%)
 Frame = +3

Query: 543  CASCQKPIAGKMIHALGQAWHPEHFVCAHCKEEIGSSPFFERTGLAYCSKDYHHLFSPRC 722
            CA C + I G  + ALG++WHPE F CAHCK  +    F E  G  YC   Y   F+P C
Sbjct: 438  CAHCNQVIRGPFLVALGKSWHPEEFNCAHCKNTMAYIGFVEEKGALYCELCYEKFFAPEC 497

Query: 723  AYCAAPILDKVLTAMDQTWHPEHFFCAHCGEVFGAEGFHEKDKKPYCRKDFLAMFSPKCG 902
              C   IL +V+ A+ QTWH   F C  CG+      FH +D +PYC  D+ A+F   C 
Sbjct: 498  GRCQRKILGEVINALKQTWHVSCFVCVACGKPIRNNVFHLEDGEPYCETDYYALFGTICR 557

Query: 903  GCNRPVL--ENYLSAMDTVWHPECFVCGDCFSSFSTGSFFELDGRPFCELHYH 1055
            GC  P+   + +L A+   WH  CFVC  C  S    +FF    +P C+ H H
Sbjct: 558  GCEFPIEAGDMFLEALGYTWHDTCFVCSVCCESLEGQTFFSKKDKPLCKKHAH 610



 Score =  134 bits (337), Expect = 2e-31
 Identities = 63/172 (36%), Positives = 84/172 (48%), Gaps = 2/172 (1%)
 Frame = +3

Query: 711  SPRCAYCAAPILDKVLTAMDQTWHPEHFFCAHCGEVFGAEGFHEKDKKPYCRKDFLAMFS 890
            +P CA+C   I    L A+ ++WHPE F CAHC       GF E+    YC   +   F+
Sbjct: 435  TPMCAHCNQVIRGPFLVALGKSWHPEEFNCAHCKNTMAYIGFVEEKGALYCELCYEKFFA 494

Query: 891  PKCGGCNRPVLENYLSAMDTVWHPECFVCGDCFSSFSTGSFFELDGRPFCELHYHQRRGT 1070
            P+CG C R +L   ++A+   WH  CFVC  C        F   DG P+CE  Y+   GT
Sbjct: 495  PECGRCQRKILGEVINALKQTWHVSCFVCVACGKPIRNNVFHLEDGEPYCETDYYALFGT 554

Query: 1071 LCHGCGQPITG--RCISAMGYKFHPEHFVCDFCLMQLSKGIFREQNDKTYCQ 1220
            +C GC  PI      + A+GY +H   FVC  C   L    F  + DK  C+
Sbjct: 555  ICRGCEFPIEAGDMFLEALGYTWHDTCFVCSVCCESLEGQTFFSKKDKPLCK 606



 Score = 73.2 bits (178), Expect = 6e-13
 Identities = 36/118 (30%), Positives = 57/118 (48%)
 Frame = +3

Query: 888  SPKCGGCNRPVLENYLSAMDTVWHPECFVCGDCFSSFSTGSFFELDGRPFCELHYHQRRG 1067
            +P C  CN+ +   +L A+   WHPE F C  C ++ +   F E  G  +CEL Y +   
Sbjct: 435  TPMCAHCNQVIRGPFLVALGKSWHPEEFNCAHCKNTMAYIGFVEEKGALYCELCYEKFFA 494

Query: 1068 TLCHGCGQPITGRCISAMGYKFHPEHFVCDFCLMQLSKGIFREQNDKTYCQPCFNKLF 1241
              C  C + I G  I+A+   +H   FVC  C   +   +F  ++ + YC+  +  LF
Sbjct: 495  PECGRCQRKILGEVINALKQTWHVSCFVCVACGKPIRNNVFHLEDGEPYCETDYYALF 552


>ref|NP_001034163.1| LIM domain-binding protein 3 isoform e [Mus musculus].
          Length = 684

 Score =  155 bits (392), Expect = 9e-38
 Identities = 66/173 (38%), Positives = 94/173 (54%), Gaps = 2/173 (1%)
 Frame = +3

Query: 543  CASCQKPIAGKMIHALGQAWHPEHFVCAHCKEEIGSSPFFERTGLAYCSKDYHHLFSPRC 722
            C  C   I G  + A+G++WHPE F CA+CK  +    F E     YC + Y   F+P C
Sbjct: 508  CGHCNNVIRGPFLVAMGRSWHPEEFNCAYCKTSLADVCFVEEQNNVYCERCYEQFFAPIC 567

Query: 723  AYCAAPILDKVLTAMDQTWHPEHFFCAHCGEVFGAEGFHEKDKKPYCRKDFLAMFSPKCG 902
            A C   I+ +V+ A+ QTWH   F CA C + FG   FH +D +PYC KD++ +FS KC 
Sbjct: 568  AKCNTKIMGEVMHALRQTWHTTCFVCAACKKPFGNSLFHMEDGEPYCEKDYINLFSTKCH 627

Query: 903  GCNRPVL--ENYLSAMDTVWHPECFVCGDCFSSFSTGSFFELDGRPFCELHYH 1055
            GC+ PV   + ++ A+   WH  CF+C  C  +     F+    +P C+ H H
Sbjct: 628  GCDFPVEAGDKFIEALGHTWHDTCFICAVCHVNLEGQPFYSKKDKPLCKKHAH 680



 Score =  124 bits (312), Expect = 2e-28
 Identities = 58/172 (33%), Positives = 81/172 (47%), Gaps = 2/172 (1%)
 Frame = +3

Query: 711  SPRCAYCAAPILDKVLTAMDQTWHPEHFFCAHCGEVFGAEGFHEKDKKPYCRKDFLAMFS 890
            +P C +C   I    L AM ++WHPE F CA+C        F E+    YC + +   F+
Sbjct: 505  TPLCGHCNNVIRGPFLVAMGRSWHPEEFNCAYCKTSLADVCFVEEQNNVYCERCYEQFFA 564

Query: 891  PKCGGCNRPVLENYLSAMDTVWHPECFVCGDCFSSFSTGSFFELDGRPFCELHYHQRRGT 1070
            P C  CN  ++   + A+   WH  CFVC  C   F    F   DG P+CE  Y     T
Sbjct: 565  PICAKCNTKIMGEVMHALRQTWHTTCFVCAACKKPFGNSLFHMEDGEPYCEKDYINLFST 624

Query: 1071 LCHGCGQPITG--RCISAMGYKFHPEHFVCDFCLMQLSKGIFREQNDKTYCQ 1220
             CHGC  P+    + I A+G+ +H   F+C  C + L    F  + DK  C+
Sbjct: 625  KCHGCDFPVEAGDKFIEALGHTWHDTCFICAVCHVNLEGQPFYSKKDKPLCK 676



 Score = 75.9 bits (185), Expect = 1e-13
 Identities = 37/119 (31%), Positives = 54/119 (45%)
 Frame = +3

Query: 888  SPKCGGCNRPVLENYLSAMDTVWHPECFVCGDCFSSFSTGSFFELDGRPFCELHYHQRRG 1067
            +P CG CN  +   +L AM   WHPE F C  C +S +   F E     +CE  Y Q   
Sbjct: 505  TPLCGHCNNVIRGPFLVAMGRSWHPEEFNCAYCKTSLADVCFVEEQNNVYCERCYEQFFA 564

Query: 1068 TLCHGCGQPITGRCISAMGYKFHPEHFVCDFCLMQLSKGIFREQNDKTYCQPCFNKLFT 1244
             +C  C   I G  + A+   +H   FVC  C       +F  ++ + YC+  +  LF+
Sbjct: 565  PICAKCNTKIMGEVMHALRQTWHTTCFVCAACKKPFGNSLFHMEDGEPYCEKDYINLFS 623



 Score = 51.6 bits (122), Expect = 2e-06
 Identities = 22/60 (36%), Positives = 31/60 (51%)
 Frame = +3

Query: 1062 RGTLCHGCGQPITGRCISAMGYKFHPEHFVCDFCLMQLSKGIFREQNDKTYCQPCFNKLF 1241
            R  LC  C   I G  + AMG  +HPE F C +C   L+   F E+ +  YC+ C+ + F
Sbjct: 504  RTPLCGHCNNVIRGPFLVAMGRSWHPEEFNCAYCKTSLADVCFVEEQNNVYCERCYEQFF 563


>ref|NP_001034162.1| LIM domain-binding protein 3 isoform d [Mus musculus].
          Length = 622

 Score =  155 bits (392), Expect = 9e-38
 Identities = 66/173 (38%), Positives = 94/173 (54%), Gaps = 2/173 (1%)
 Frame = +3

Query: 543  CASCQKPIAGKMIHALGQAWHPEHFVCAHCKEEIGSSPFFERTGLAYCSKDYHHLFSPRC 722
            C  C   I G  + A+G++WHPE F CA+CK  +    F E     YC + Y   F+P C
Sbjct: 446  CGHCNNVIRGPFLVAMGRSWHPEEFNCAYCKTSLADVCFVEEQNNVYCERCYEQFFAPIC 505

Query: 723  AYCAAPILDKVLTAMDQTWHPEHFFCAHCGEVFGAEGFHEKDKKPYCRKDFLAMFSPKCG 902
            A C   I+ +V+ A+ QTWH   F CA C + FG   FH +D +PYC KD++ +FS KC 
Sbjct: 506  AKCNTKIMGEVMHALRQTWHTTCFVCAACKKPFGNSLFHMEDGEPYCEKDYINLFSTKCH 565

Query: 903  GCNRPVL--ENYLSAMDTVWHPECFVCGDCFSSFSTGSFFELDGRPFCELHYH 1055
            GC+ PV   + ++ A+   WH  CF+C  C  +     F+    +P C+ H H
Sbjct: 566  GCDFPVEAGDKFIEALGHTWHDTCFICAVCHVNLEGQPFYSKKDKPLCKKHAH 618



 Score =  124 bits (312), Expect = 2e-28
 Identities = 58/172 (33%), Positives = 81/172 (47%), Gaps = 2/172 (1%)
 Frame = +3

Query: 711  SPRCAYCAAPILDKVLTAMDQTWHPEHFFCAHCGEVFGAEGFHEKDKKPYCRKDFLAMFS 890
            +P C +C   I    L AM ++WHPE F CA+C        F E+    YC + +   F+
Sbjct: 443  TPLCGHCNNVIRGPFLVAMGRSWHPEEFNCAYCKTSLADVCFVEEQNNVYCERCYEQFFA 502

Query: 891  PKCGGCNRPVLENYLSAMDTVWHPECFVCGDCFSSFSTGSFFELDGRPFCELHYHQRRGT 1070
            P C  CN  ++   + A+   WH  CFVC  C   F    F   DG P+CE  Y     T
Sbjct: 503  PICAKCNTKIMGEVMHALRQTWHTTCFVCAACKKPFGNSLFHMEDGEPYCEKDYINLFST 562

Query: 1071 LCHGCGQPITG--RCISAMGYKFHPEHFVCDFCLMQLSKGIFREQNDKTYCQ 1220
             CHGC  P+    + I A+G+ +H   F+C  C + L    F  + DK  C+
Sbjct: 563  KCHGCDFPVEAGDKFIEALGHTWHDTCFICAVCHVNLEGQPFYSKKDKPLCK 614



 Score = 75.9 bits (185), Expect = 1e-13
 Identities = 37/119 (31%), Positives = 54/119 (45%)
 Frame = +3

Query: 888  SPKCGGCNRPVLENYLSAMDTVWHPECFVCGDCFSSFSTGSFFELDGRPFCELHYHQRRG 1067
            +P CG CN  +   +L AM   WHPE F C  C +S +   F E     +CE  Y Q   
Sbjct: 443  TPLCGHCNNVIRGPFLVAMGRSWHPEEFNCAYCKTSLADVCFVEEQNNVYCERCYEQFFA 502

Query: 1068 TLCHGCGQPITGRCISAMGYKFHPEHFVCDFCLMQLSKGIFREQNDKTYCQPCFNKLFT 1244
             +C  C   I G  + A+   +H   FVC  C       +F  ++ + YC+  +  LF+
Sbjct: 503  PICAKCNTKIMGEVMHALRQTWHTTCFVCAACKKPFGNSLFHMEDGEPYCEKDYINLFS 561



 Score = 51.6 bits (122), Expect = 2e-06
 Identities = 22/60 (36%), Positives = 31/60 (51%)
 Frame = +3

Query: 1062 RGTLCHGCGQPITGRCISAMGYKFHPEHFVCDFCLMQLSKGIFREQNDKTYCQPCFNKLF 1241
            R  LC  C   I G  + AMG  +HPE F C +C   L+   F E+ +  YC+ C+ + F
Sbjct: 442  RTPLCGHCNNVIRGPFLVAMGRSWHPEEFNCAYCKTSLADVCFVEEQNNVYCERCYEQFF 501


  Database: RefSeq49_MP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 15,617,559
  Number of sequences in database:  30,036
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 30036
Number of Hits to DB: 59,841,592
Number of extensions: 1657097
Number of successful extensions: 7156
Number of sequences better than 1.0e-05: 88
Number of HSP's gapped: 6614
Number of HSP's successfully gapped: 254
Length of query: 583
Length of database: 15,617,559
Length adjustment: 107
Effective length of query: 476
Effective length of database: 12,403,707
Effective search space: 5904164532
Effective search space used: 5904164532
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-013458
         (1751 letters)

Database: RefSeq49_HP.fasta 
           32,964 sequences; 18,297,164 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_001137467.1| leupaxin isoform 1 [Homo sapiens].                647   0.0  
Alignment   gi|NP_004802.1| leupaxin isoform 2 [Homo sapiens].                   647   0.0  
Alignment   gi|NP_079433.3| paxillin isoform 4 [Homo sapiens].                   420   e-117
Alignment   gi|NP_002850.2| paxillin isoform 1 [Homo sapiens].                   420   e-117
Alignment   gi|NP_001074324.1| paxillin isoform 2 [Homo sapiens].                411   e-115
Alignment   gi|NP_001230685.1| paxillin isoform 3 [Homo sapiens].                411   e-115
Alignment   gi|NP_001158191.1| transforming growth factor beta-1-induced tr...   355   7e-98
Alignment   gi|NP_001035919.1| transforming growth factor beta-1-induced tr...   355   7e-98
Alignment   gi|NP_057011.2| transforming growth factor beta-1-induced trans...   355   7e-98
Alignment   gi|NP_001073583.1| LIM domain-binding protein 3 isoform 2 [Homo...   158   2e-38

>ref|NP_001137467.1| leupaxin isoform 1 [Homo sapiens].
          Length = 391

 Score =  647 bits (1669), Expect = 0.0
 Identities = 299/371 (80%), Positives = 316/371 (85%)
 Frame = +3

Query: 129  STLQESDEYDSPASLSLDGHSKKESDLAETSKVPSAQDDTSSFSVQLVYTTNIQEPRVYS 308
            STLQ+SDEY +PA L LD HS+KE++L ETS++ S QD+TS    QLVYTTNIQE  VYS
Sbjct: 19   STLQDSDEYSNPAPLPLDQHSRKETNLDETSEILSIQDNTSPLPAQLVYTTNIQELNVYS 78

Query: 309  EVQXXXXXXXXXXXXXXAQLDELMAHLCEMQIQCTVKADASTKHLPEKQDPKTSLDSMXX 488
            E Q              AQLDELMAHL EMQ +  V+ADA  KHLP+KQD K SLDSM  
Sbjct: 79   EAQEPKESPPPSKTSAAAQLDELMAHLTEMQAKVAVRADAGKKHLPDKQDHKASLDSMLG 138

Query: 489  XXXXXXXXXXIATVPKGHCASCQKPIAGKMIHALGQAWHPEHFVCAHCKEEIGSSPFFER 668
                      IATVPKGHCASCQKPIAGK+IHALGQ+WHPEHFVC HCKEEIGSSPFFER
Sbjct: 139  GLEQELQDLGIATVPKGHCASCQKPIAGKVIHALGQSWHPEHFVCTHCKEEIGSSPFFER 198

Query: 669  TGLAYCSKDYHHLFSPRCAYCAAPILDKVLTAMDQTWHPEHFFCAHCGEVFGAEGFHEKD 848
            +GLAYC  DYH LFSPRCAYCAAPILDKVLTAM+QTWHPEHFFC+HCGEVFGAEGFHEKD
Sbjct: 199  SGLAYCPNDYHQLFSPRCAYCAAPILDKVLTAMNQTWHPEHFFCSHCGEVFGAEGFHEKD 258

Query: 849  KKPYCRKDFLAMFSPKCGGCNRPVLENYLSAMDTVWHPECFVCGDCFSSFSTGSFFELDG 1028
            KKPYCRKDFLAMFSPKCGGCNRPVLENYLSAMDTVWHPECFVCGDCF+SFSTGSFFELDG
Sbjct: 259  KKPYCRKDFLAMFSPKCGGCNRPVLENYLSAMDTVWHPECFVCGDCFTSFSTGSFFELDG 318

Query: 1029 RPFCELHYHQRRGTLCHGCGQPITGRCISAMGYKFHPEHFVCDFCLMQLSKGIFREQNDK 1208
            RPFCELHYH RRGTLCHGCGQPITGRCISAMGYKFHPEHFVC FCL QLSKGIFREQNDK
Sbjct: 319  RPFCELHYHHRRGTLCHGCGQPITGRCISAMGYKFHPEHFVCAFCLTQLSKGIFREQNDK 378

Query: 1209 TYCQPCFNKLF 1241
            TYCQPCFNKLF
Sbjct: 379  TYCQPCFNKLF 389



 Score = 91.3 bits (225), Expect = 3e-18
 Identities = 44/129 (34%), Positives = 61/129 (47%), Gaps = 1/129 (0%)
 Frame = +3

Query: 897  CGGCNRPVLENYLSAMDTVWHPECFVCGDCFSSFSTGSFFELDGRPFCELHYHQRRGTLC 1076
            C  C +P+    + A+   WHPE FVC  C     +  FFE  G  +C   YHQ     C
Sbjct: 157  CASCQKPIAGKVIHALGQSWHPEHFVCTHCKEEIGSSPFFERSGLAYCPNDYHQLFSPRC 216

Query: 1077 HGCGQPITGRCISAMGYKFHPEHFVCDFCLMQLSKGIFREQNDKTYCQPCFNKLFT-Q*S 1253
              C  PI  + ++AM   +HPEHF C  C        F E++ K YC+  F  +F+ +  
Sbjct: 217  AYCAAPILDKVLTAMNQTWHPEHFFCSHCGEVFGAEGFHEKDKKPYCRKDFLAMFSPKCG 276

Query: 1254 QLNPDLLEN 1280
              N  +LEN
Sbjct: 277  GCNRPVLEN 285


>ref|NP_004802.1| leupaxin isoform 2 [Homo sapiens].
          Length = 386

 Score =  647 bits (1669), Expect = 0.0
 Identities = 299/371 (80%), Positives = 316/371 (85%)
 Frame = +3

Query: 129  STLQESDEYDSPASLSLDGHSKKESDLAETSKVPSAQDDTSSFSVQLVYTTNIQEPRVYS 308
            STLQ+SDEY +PA L LD HS+KE++L ETS++ S QD+TS    QLVYTTNIQE  VYS
Sbjct: 14   STLQDSDEYSNPAPLPLDQHSRKETNLDETSEILSIQDNTSPLPAQLVYTTNIQELNVYS 73

Query: 309  EVQXXXXXXXXXXXXXXAQLDELMAHLCEMQIQCTVKADASTKHLPEKQDPKTSLDSMXX 488
            E Q              AQLDELMAHL EMQ +  V+ADA  KHLP+KQD K SLDSM  
Sbjct: 74   EAQEPKESPPPSKTSAAAQLDELMAHLTEMQAKVAVRADAGKKHLPDKQDHKASLDSMLG 133

Query: 489  XXXXXXXXXXIATVPKGHCASCQKPIAGKMIHALGQAWHPEHFVCAHCKEEIGSSPFFER 668
                      IATVPKGHCASCQKPIAGK+IHALGQ+WHPEHFVC HCKEEIGSSPFFER
Sbjct: 134  GLEQELQDLGIATVPKGHCASCQKPIAGKVIHALGQSWHPEHFVCTHCKEEIGSSPFFER 193

Query: 669  TGLAYCSKDYHHLFSPRCAYCAAPILDKVLTAMDQTWHPEHFFCAHCGEVFGAEGFHEKD 848
            +GLAYC  DYH LFSPRCAYCAAPILDKVLTAM+QTWHPEHFFC+HCGEVFGAEGFHEKD
Sbjct: 194  SGLAYCPNDYHQLFSPRCAYCAAPILDKVLTAMNQTWHPEHFFCSHCGEVFGAEGFHEKD 253

Query: 849  KKPYCRKDFLAMFSPKCGGCNRPVLENYLSAMDTVWHPECFVCGDCFSSFSTGSFFELDG 1028
            KKPYCRKDFLAMFSPKCGGCNRPVLENYLSAMDTVWHPECFVCGDCF+SFSTGSFFELDG
Sbjct: 254  KKPYCRKDFLAMFSPKCGGCNRPVLENYLSAMDTVWHPECFVCGDCFTSFSTGSFFELDG 313

Query: 1029 RPFCELHYHQRRGTLCHGCGQPITGRCISAMGYKFHPEHFVCDFCLMQLSKGIFREQNDK 1208
            RPFCELHYH RRGTLCHGCGQPITGRCISAMGYKFHPEHFVC FCL QLSKGIFREQNDK
Sbjct: 314  RPFCELHYHHRRGTLCHGCGQPITGRCISAMGYKFHPEHFVCAFCLTQLSKGIFREQNDK 373

Query: 1209 TYCQPCFNKLF 1241
            TYCQPCFNKLF
Sbjct: 374  TYCQPCFNKLF 384



 Score = 91.3 bits (225), Expect = 3e-18
 Identities = 44/129 (34%), Positives = 61/129 (47%), Gaps = 1/129 (0%)
 Frame = +3

Query: 897  CGGCNRPVLENYLSAMDTVWHPECFVCGDCFSSFSTGSFFELDGRPFCELHYHQRRGTLC 1076
            C  C +P+    + A+   WHPE FVC  C     +  FFE  G  +C   YHQ     C
Sbjct: 152  CASCQKPIAGKVIHALGQSWHPEHFVCTHCKEEIGSSPFFERSGLAYCPNDYHQLFSPRC 211

Query: 1077 HGCGQPITGRCISAMGYKFHPEHFVCDFCLMQLSKGIFREQNDKTYCQPCFNKLFT-Q*S 1253
              C  PI  + ++AM   +HPEHF C  C        F E++ K YC+  F  +F+ +  
Sbjct: 212  AYCAAPILDKVLTAMNQTWHPEHFFCSHCGEVFGAEGFHEKDKKPYCRKDFLAMFSPKCG 271

Query: 1254 QLNPDLLEN 1280
              N  +LEN
Sbjct: 272  GCNRPVLEN 280


>ref|NP_079433.3| paxillin isoform 4 [Homo sapiens].
          Length = 424

 Score =  420 bits (1079), Expect = e-117
 Identities = 186/295 (63%), Positives = 223/295 (75%), Gaps = 2/295 (0%)
 Frame = +3

Query: 363  QLDELMAHLCEMQIQCTVKADASTKHLPEKQDPK--TSLDSMXXXXXXXXXXXXIATVPK 536
            +LDELMA L + +     K  +S+   P    PK  + LDSM            +ATV K
Sbjct: 132  ELDELMASLSDFKFMAQGKTGSSS---PPGGPPKPGSQLDSMLGSLQSDLNKLGVATVAK 188

Query: 537  GHCASCQKPIAGKMIHALGQAWHPEHFVCAHCKEEIGSSPFFERTGLAYCSKDYHHLFSP 716
            G C +C+KPIAG+++ A+G+ WHPEHFVC HC+EEIGS  FFER G  YC KDYH+LFSP
Sbjct: 189  GVCGACKKPIAGQVVTAMGKTWHPEHFVCTHCQEEIGSRNFFERDGQPYCEKDYHNLFSP 248

Query: 717  RCAYCAAPILDKVLTAMDQTWHPEHFFCAHCGEVFGAEGFHEKDKKPYCRKDFLAMFSPK 896
            RC YC  PILDKV+TA+D+TWHPEHFFCA CG  FG EGFHEKD K YCRKD+  MF+PK
Sbjct: 249  RCYYCNGPILDKVVTALDRTWHPEHFFCAQCGAFFGPEGFHEKDGKAYCRKDYFDMFAPK 308

Query: 897  CGGCNRPVLENYLSAMDTVWHPECFVCGDCFSSFSTGSFFELDGRPFCELHYHQRRGTLC 1076
            CGGC R +LENY+SA++T+WHPECFVC +CF+ F  GSFFE DG+P+CE+HYH+RRG+LC
Sbjct: 309  CGGCARAILENYISALNTLWHPECFVCRECFTPFVNGSFFEHDGQPYCEVHYHERRGSLC 368

Query: 1077 HGCGQPITGRCISAMGYKFHPEHFVCDFCLMQLSKGIFREQNDKTYCQPCFNKLF 1241
             GC +PITGRCI+AM  KFHPEHFVC FCL QL+KG F+EQNDK YCQ CF KLF
Sbjct: 369  SGCQKPITGRCITAMAKKFHPEHFVCAFCLKQLNKGTFKEQNDKPYCQNCFLKLF 423



 Score = 57.4 bits (137), Expect = 4e-08
 Identities = 22/58 (37%), Positives = 37/58 (63%)
 Frame = +3

Query: 1071 LCHGCGQPITGRCISAMGYKFHPEHFVCDFCLMQLSKGIFREQNDKTYCQPCFNKLFT 1244
            +C  C +PI G+ ++AMG  +HPEHFVC  C  ++    F E++ + YC+  ++ LF+
Sbjct: 190  VCGACKKPIAGQVVTAMGKTWHPEHFVCTHCQEEIGSRNFFERDGQPYCEKDYHNLFS 247


>ref|NP_002850.2| paxillin isoform 1 [Homo sapiens].
          Length = 557

 Score =  420 bits (1079), Expect = e-117
 Identities = 186/295 (63%), Positives = 223/295 (75%), Gaps = 2/295 (0%)
 Frame = +3

Query: 363  QLDELMAHLCEMQIQCTVKADASTKHLPEKQDPK--TSLDSMXXXXXXXXXXXXIATVPK 536
            +LDELMA L + +     K  +S+   P    PK  + LDSM            +ATV K
Sbjct: 265  ELDELMASLSDFKFMAQGKTGSSS---PPGGPPKPGSQLDSMLGSLQSDLNKLGVATVAK 321

Query: 537  GHCASCQKPIAGKMIHALGQAWHPEHFVCAHCKEEIGSSPFFERTGLAYCSKDYHHLFSP 716
            G C +C+KPIAG+++ A+G+ WHPEHFVC HC+EEIGS  FFER G  YC KDYH+LFSP
Sbjct: 322  GVCGACKKPIAGQVVTAMGKTWHPEHFVCTHCQEEIGSRNFFERDGQPYCEKDYHNLFSP 381

Query: 717  RCAYCAAPILDKVLTAMDQTWHPEHFFCAHCGEVFGAEGFHEKDKKPYCRKDFLAMFSPK 896
            RC YC  PILDKV+TA+D+TWHPEHFFCA CG  FG EGFHEKD K YCRKD+  MF+PK
Sbjct: 382  RCYYCNGPILDKVVTALDRTWHPEHFFCAQCGAFFGPEGFHEKDGKAYCRKDYFDMFAPK 441

Query: 897  CGGCNRPVLENYLSAMDTVWHPECFVCGDCFSSFSTGSFFELDGRPFCELHYHQRRGTLC 1076
            CGGC R +LENY+SA++T+WHPECFVC +CF+ F  GSFFE DG+P+CE+HYH+RRG+LC
Sbjct: 442  CGGCARAILENYISALNTLWHPECFVCRECFTPFVNGSFFEHDGQPYCEVHYHERRGSLC 501

Query: 1077 HGCGQPITGRCISAMGYKFHPEHFVCDFCLMQLSKGIFREQNDKTYCQPCFNKLF 1241
             GC +PITGRCI+AM  KFHPEHFVC FCL QL+KG F+EQNDK YCQ CF KLF
Sbjct: 502  SGCQKPITGRCITAMAKKFHPEHFVCAFCLKQLNKGTFKEQNDKPYCQNCFLKLF 556



 Score = 57.4 bits (137), Expect = 4e-08
 Identities = 22/58 (37%), Positives = 37/58 (63%)
 Frame = +3

Query: 1071 LCHGCGQPITGRCISAMGYKFHPEHFVCDFCLMQLSKGIFREQNDKTYCQPCFNKLFT 1244
            +C  C +PI G+ ++AMG  +HPEHFVC  C  ++    F E++ + YC+  ++ LF+
Sbjct: 323  VCGACKKPIAGQVVTAMGKTWHPEHFVCTHCQEEIGSRNFFERDGQPYCEKDYHNLFS 380


>ref|NP_001074324.1| paxillin isoform 2 [Homo sapiens].
          Length = 591

 Score =  411 bits (1057), Expect = e-115
 Identities = 175/261 (67%), Positives = 207/261 (79%)
 Frame = +3

Query: 459  PKTSLDSMXXXXXXXXXXXXIATVPKGHCASCQKPIAGKMIHALGQAWHPEHFVCAHCKE 638
            P + LDSM            +ATV KG C +C+KPIAG+++ A+G+ WHPEHFVC HC+E
Sbjct: 330  PGSQLDSMLGSLQSDLNKLGVATVAKGVCGACKKPIAGQVVTAMGKTWHPEHFVCTHCQE 389

Query: 639  EIGSSPFFERTGLAYCSKDYHHLFSPRCAYCAAPILDKVLTAMDQTWHPEHFFCAHCGEV 818
            EIGS  FFER G  YC KDYH+LFSPRC YC  PILDKV+TA+D+TWHPEHFFCA CG  
Sbjct: 390  EIGSRNFFERDGQPYCEKDYHNLFSPRCYYCNGPILDKVVTALDRTWHPEHFFCAQCGAF 449

Query: 819  FGAEGFHEKDKKPYCRKDFLAMFSPKCGGCNRPVLENYLSAMDTVWHPECFVCGDCFSSF 998
            FG EGFHEKD K YCRKD+  MF+PKCGGC R +LENY+SA++T+WHPECFVC +CF+ F
Sbjct: 450  FGPEGFHEKDGKAYCRKDYFDMFAPKCGGCARAILENYISALNTLWHPECFVCRECFTPF 509

Query: 999  STGSFFELDGRPFCELHYHQRRGTLCHGCGQPITGRCISAMGYKFHPEHFVCDFCLMQLS 1178
              GSFFE DG+P+CE+HYH+RRG+LC GC +PITGRCI+AM  KFHPEHFVC FCL QL+
Sbjct: 510  VNGSFFEHDGQPYCEVHYHERRGSLCSGCQKPITGRCITAMAKKFHPEHFVCAFCLKQLN 569

Query: 1179 KGIFREQNDKTYCQPCFNKLF 1241
            KG F+EQNDK YCQ CF KLF
Sbjct: 570  KGTFKEQNDKPYCQNCFLKLF 590



 Score = 57.4 bits (137), Expect = 4e-08
 Identities = 22/58 (37%), Positives = 37/58 (63%)
 Frame = +3

Query: 1071 LCHGCGQPITGRCISAMGYKFHPEHFVCDFCLMQLSKGIFREQNDKTYCQPCFNKLFT 1244
            +C  C +PI G+ ++AMG  +HPEHFVC  C  ++    F E++ + YC+  ++ LF+
Sbjct: 357  VCGACKKPIAGQVVTAMGKTWHPEHFVCTHCQEEIGSRNFFERDGQPYCEKDYHNLFS 414


>ref|NP_001230685.1| paxillin isoform 3 [Homo sapiens].
          Length = 605

 Score =  411 bits (1057), Expect = e-115
 Identities = 175/261 (67%), Positives = 207/261 (79%)
 Frame = +3

Query: 459  PKTSLDSMXXXXXXXXXXXXIATVPKGHCASCQKPIAGKMIHALGQAWHPEHFVCAHCKE 638
            P + LDSM            +ATV KG C +C+KPIAG+++ A+G+ WHPEHFVC HC+E
Sbjct: 344  PGSQLDSMLGSLQSDLNKLGVATVAKGVCGACKKPIAGQVVTAMGKTWHPEHFVCTHCQE 403

Query: 639  EIGSSPFFERTGLAYCSKDYHHLFSPRCAYCAAPILDKVLTAMDQTWHPEHFFCAHCGEV 818
            EIGS  FFER G  YC KDYH+LFSPRC YC  PILDKV+TA+D+TWHPEHFFCA CG  
Sbjct: 404  EIGSRNFFERDGQPYCEKDYHNLFSPRCYYCNGPILDKVVTALDRTWHPEHFFCAQCGAF 463

Query: 819  FGAEGFHEKDKKPYCRKDFLAMFSPKCGGCNRPVLENYLSAMDTVWHPECFVCGDCFSSF 998
            FG EGFHEKD K YCRKD+  MF+PKCGGC R +LENY+SA++T+WHPECFVC +CF+ F
Sbjct: 464  FGPEGFHEKDGKAYCRKDYFDMFAPKCGGCARAILENYISALNTLWHPECFVCRECFTPF 523

Query: 999  STGSFFELDGRPFCELHYHQRRGTLCHGCGQPITGRCISAMGYKFHPEHFVCDFCLMQLS 1178
              GSFFE DG+P+CE+HYH+RRG+LC GC +PITGRCI+AM  KFHPEHFVC FCL QL+
Sbjct: 524  VNGSFFEHDGQPYCEVHYHERRGSLCSGCQKPITGRCITAMAKKFHPEHFVCAFCLKQLN 583

Query: 1179 KGIFREQNDKTYCQPCFNKLF 1241
            KG F+EQNDK YCQ CF KLF
Sbjct: 584  KGTFKEQNDKPYCQNCFLKLF 604



 Score = 57.4 bits (137), Expect = 4e-08
 Identities = 22/58 (37%), Positives = 37/58 (63%)
 Frame = +3

Query: 1071 LCHGCGQPITGRCISAMGYKFHPEHFVCDFCLMQLSKGIFREQNDKTYCQPCFNKLFT 1244
            +C  C +PI G+ ++AMG  +HPEHFVC  C  ++    F E++ + YC+  ++ LF+
Sbjct: 371  VCGACKKPIAGQVVTAMGKTWHPEHFVCTHCQEEIGSRNFFERDGQPYCEKDYHNLFS 428


>ref|NP_001158191.1| transforming growth factor beta-1-induced transcript 1 protein
            isoform 2 [Homo sapiens].
          Length = 444

 Score =  355 bits (911), Expect = 7e-98
 Identities = 155/304 (50%), Positives = 202/304 (66%), Gaps = 11/304 (3%)
 Frame = +3

Query: 363  QLDELMAHLCEMQIQCTVKADASTKH-----------LPEKQDPKTSLDSMXXXXXXXXX 509
            +LD LMA L + ++Q  + A   T+             P +   K SLD+M         
Sbjct: 140  ELDRLMASLSDFRVQNHLPASGPTQPPVVSSTNEGSPSPPEPTGKGSLDTMLGLLQSDLS 199

Query: 510  XXXIATVPKGHCASCQKPIAGKMIHALGQAWHPEHFVCAHCKEEIGSSPFFERTGLAYCS 689
               + T  KG C SC KPIAG+++ ALG+AWHPEHFVC  C   +G S FFE+ G  +C 
Sbjct: 200  RRGVPTQAKGLCGSCNKPIAGQVVTALGRAWHPEHFVCGGCSTALGGSSFFEKDGAPFCP 259

Query: 690  KDYHHLFSPRCAYCAAPILDKVLTAMDQTWHPEHFFCAHCGEVFGAEGFHEKDKKPYCRK 869
            + Y   FSPRC +C  PI  K++TA+   WHPEHF C  CGE FG EGFHE++ +PYCR+
Sbjct: 260  ECYFERFSPRCGFCNQPIRHKMVTALGTHWHPEHFCCVSCGEPFGDEGFHEREGRPYCRR 319

Query: 870  DFLAMFSPKCGGCNRPVLENYLSAMDTVWHPECFVCGDCFSSFSTGSFFELDGRPFCELH 1049
            DFL +F+P+C GC  P+L+NY+SA+  +WHP+CFVC +CF+ FS GSFFE +GRP CE H
Sbjct: 320  DFLQLFAPRCQGCQGPILDNYISALSALWHPDCFVCRECFAPFSGGSFFEHEGRPLCENH 379

Query: 1050 YHQRRGTLCHGCGQPITGRCISAMGYKFHPEHFVCDFCLMQLSKGIFREQNDKTYCQPCF 1229
            +H RRG+LC  CG P+TGRC+SA+G +FHP+HF C FCL  L+KG F+E+  K YCQPCF
Sbjct: 380  FHARRGSLCATCGLPVTGRCVSALGRRFHPDHFTCTFCLRPLTKGSFQERAGKPYCQPCF 439

Query: 1230 NKLF 1241
             KLF
Sbjct: 440  LKLF 443



 Score = 55.5 bits (132), Expect = 2e-07
 Identities = 22/58 (37%), Positives = 34/58 (58%)
 Frame = +3

Query: 1071 LCHGCGQPITGRCISAMGYKFHPEHFVCDFCLMQLSKGIFREQNDKTYCQPCFNKLFT 1244
            LC  C +PI G+ ++A+G  +HPEHFVC  C   L    F E++   +C  C+ + F+
Sbjct: 210  LCGSCNKPIAGQVVTALGRAWHPEHFVCGGCSTALGGSSFFEKDGAPFCPECYFERFS 267


>ref|NP_001035919.1| transforming growth factor beta-1-induced transcript 1 protein
            isoform 1 [Homo sapiens].
          Length = 461

 Score =  355 bits (911), Expect = 7e-98
 Identities = 155/304 (50%), Positives = 202/304 (66%), Gaps = 11/304 (3%)
 Frame = +3

Query: 363  QLDELMAHLCEMQIQCTVKADASTKH-----------LPEKQDPKTSLDSMXXXXXXXXX 509
            +LD LMA L + ++Q  + A   T+             P +   K SLD+M         
Sbjct: 157  ELDRLMASLSDFRVQNHLPASGPTQPPVVSSTNEGSPSPPEPTGKGSLDTMLGLLQSDLS 216

Query: 510  XXXIATVPKGHCASCQKPIAGKMIHALGQAWHPEHFVCAHCKEEIGSSPFFERTGLAYCS 689
               + T  KG C SC KPIAG+++ ALG+AWHPEHFVC  C   +G S FFE+ G  +C 
Sbjct: 217  RRGVPTQAKGLCGSCNKPIAGQVVTALGRAWHPEHFVCGGCSTALGGSSFFEKDGAPFCP 276

Query: 690  KDYHHLFSPRCAYCAAPILDKVLTAMDQTWHPEHFFCAHCGEVFGAEGFHEKDKKPYCRK 869
            + Y   FSPRC +C  PI  K++TA+   WHPEHF C  CGE FG EGFHE++ +PYCR+
Sbjct: 277  ECYFERFSPRCGFCNQPIRHKMVTALGTHWHPEHFCCVSCGEPFGDEGFHEREGRPYCRR 336

Query: 870  DFLAMFSPKCGGCNRPVLENYLSAMDTVWHPECFVCGDCFSSFSTGSFFELDGRPFCELH 1049
            DFL +F+P+C GC  P+L+NY+SA+  +WHP+CFVC +CF+ FS GSFFE +GRP CE H
Sbjct: 337  DFLQLFAPRCQGCQGPILDNYISALSALWHPDCFVCRECFAPFSGGSFFEHEGRPLCENH 396

Query: 1050 YHQRRGTLCHGCGQPITGRCISAMGYKFHPEHFVCDFCLMQLSKGIFREQNDKTYCQPCF 1229
            +H RRG+LC  CG P+TGRC+SA+G +FHP+HF C FCL  L+KG F+E+  K YCQPCF
Sbjct: 397  FHARRGSLCATCGLPVTGRCVSALGRRFHPDHFTCTFCLRPLTKGSFQERAGKPYCQPCF 456

Query: 1230 NKLF 1241
             KLF
Sbjct: 457  LKLF 460



 Score = 55.5 bits (132), Expect = 2e-07
 Identities = 22/58 (37%), Positives = 34/58 (58%)
 Frame = +3

Query: 1071 LCHGCGQPITGRCISAMGYKFHPEHFVCDFCLMQLSKGIFREQNDKTYCQPCFNKLFT 1244
            LC  C +PI G+ ++A+G  +HPEHFVC  C   L    F E++   +C  C+ + F+
Sbjct: 227  LCGSCNKPIAGQVVTALGRAWHPEHFVCGGCSTALGGSSFFEKDGAPFCPECYFERFS 284


>ref|NP_057011.2| transforming growth factor beta-1-induced transcript 1 protein
            isoform 2 [Homo sapiens].
          Length = 444

 Score =  355 bits (911), Expect = 7e-98
 Identities = 155/304 (50%), Positives = 202/304 (66%), Gaps = 11/304 (3%)
 Frame = +3

Query: 363  QLDELMAHLCEMQIQCTVKADASTKH-----------LPEKQDPKTSLDSMXXXXXXXXX 509
            +LD LMA L + ++Q  + A   T+             P +   K SLD+M         
Sbjct: 140  ELDRLMASLSDFRVQNHLPASGPTQPPVVSSTNEGSPSPPEPTGKGSLDTMLGLLQSDLS 199

Query: 510  XXXIATVPKGHCASCQKPIAGKMIHALGQAWHPEHFVCAHCKEEIGSSPFFERTGLAYCS 689
               + T  KG C SC KPIAG+++ ALG+AWHPEHFVC  C   +G S FFE+ G  +C 
Sbjct: 200  RRGVPTQAKGLCGSCNKPIAGQVVTALGRAWHPEHFVCGGCSTALGGSSFFEKDGAPFCP 259

Query: 690  KDYHHLFSPRCAYCAAPILDKVLTAMDQTWHPEHFFCAHCGEVFGAEGFHEKDKKPYCRK 869
            + Y   FSPRC +C  PI  K++TA+   WHPEHF C  CGE FG EGFHE++ +PYCR+
Sbjct: 260  ECYFERFSPRCGFCNQPIRHKMVTALGTHWHPEHFCCVSCGEPFGDEGFHEREGRPYCRR 319

Query: 870  DFLAMFSPKCGGCNRPVLENYLSAMDTVWHPECFVCGDCFSSFSTGSFFELDGRPFCELH 1049
            DFL +F+P+C GC  P+L+NY+SA+  +WHP+CFVC +CF+ FS GSFFE +GRP CE H
Sbjct: 320  DFLQLFAPRCQGCQGPILDNYISALSALWHPDCFVCRECFAPFSGGSFFEHEGRPLCENH 379

Query: 1050 YHQRRGTLCHGCGQPITGRCISAMGYKFHPEHFVCDFCLMQLSKGIFREQNDKTYCQPCF 1229
            +H RRG+LC  CG P+TGRC+SA+G +FHP+HF C FCL  L+KG F+E+  K YCQPCF
Sbjct: 380  FHARRGSLCATCGLPVTGRCVSALGRRFHPDHFTCTFCLRPLTKGSFQERAGKPYCQPCF 439

Query: 1230 NKLF 1241
             KLF
Sbjct: 440  LKLF 443



 Score = 55.5 bits (132), Expect = 2e-07
 Identities = 22/58 (37%), Positives = 34/58 (58%)
 Frame = +3

Query: 1071 LCHGCGQPITGRCISAMGYKFHPEHFVCDFCLMQLSKGIFREQNDKTYCQPCFNKLFT 1244
            LC  C +PI G+ ++A+G  +HPEHFVC  C   L    F E++   +C  C+ + F+
Sbjct: 210  LCGSCNKPIAGQVVTALGRAWHPEHFVCGGCSTALGGSSFFEKDGAPFCPECYFERFS 267


>ref|NP_001073583.1| LIM domain-binding protein 3 isoform 2 [Homo sapiens].
          Length = 617

 Score =  158 bits (399), Expect = 2e-38
 Identities = 67/173 (38%), Positives = 94/173 (54%), Gaps = 2/173 (1%)
 Frame = +3

Query: 543  CASCQKPIAGKMIHALGQAWHPEHFVCAHCKEEIGSSPFFERTGLAYCSKDYHHLFSPRC 722
            C  C   I G  + A+G++WHPE F CA+CK  +    F E     YC + Y   F+P C
Sbjct: 441  CGHCNNVIRGPFLVAMGRSWHPEEFTCAYCKTSLADVCFVEEQNNVYCERCYEQFFAPLC 500

Query: 723  AYCAAPILDKVLTAMDQTWHPEHFFCAHCGEVFGAEGFHEKDKKPYCRKDFLAMFSPKCG 902
            A C   I+ +V+ A+ QTWH   F CA C + FG   FH +D +PYC KD++ +FS KC 
Sbjct: 501  AKCNTKIMGEVMHALRQTWHTTCFVCAACKKPFGNSLFHMEDGEPYCEKDYINLFSTKCH 560

Query: 903  GCNRPVL--ENYLSAMDTVWHPECFVCGDCFSSFSTGSFFELDGRPFCELHYH 1055
            GC+ PV   + ++ A+   WH  CF+C  C  +     F+    RP C+ H H
Sbjct: 561  GCDFPVEAGDKFIEALGHTWHDTCFICAVCHVNLEGQPFYSKKDRPLCKKHAH 613



 Score =  124 bits (311), Expect = 3e-28
 Identities = 57/172 (33%), Positives = 81/172 (47%), Gaps = 2/172 (1%)
 Frame = +3

Query: 711  SPRCAYCAAPILDKVLTAMDQTWHPEHFFCAHCGEVFGAEGFHEKDKKPYCRKDFLAMFS 890
            +P C +C   I    L AM ++WHPE F CA+C        F E+    YC + +   F+
Sbjct: 438  TPLCGHCNNVIRGPFLVAMGRSWHPEEFTCAYCKTSLADVCFVEEQNNVYCERCYEQFFA 497

Query: 891  PKCGGCNRPVLENYLSAMDTVWHPECFVCGDCFSSFSTGSFFELDGRPFCELHYHQRRGT 1070
            P C  CN  ++   + A+   WH  CFVC  C   F    F   DG P+CE  Y     T
Sbjct: 498  PLCAKCNTKIMGEVMHALRQTWHTTCFVCAACKKPFGNSLFHMEDGEPYCEKDYINLFST 557

Query: 1071 LCHGCGQPITG--RCISAMGYKFHPEHFVCDFCLMQLSKGIFREQNDKTYCQ 1220
             CHGC  P+    + I A+G+ +H   F+C  C + L    F  + D+  C+
Sbjct: 558  KCHGCDFPVEAGDKFIEALGHTWHDTCFICAVCHVNLEGQPFYSKKDRPLCK 609



 Score = 77.8 bits (190), Expect = 3e-14
 Identities = 38/119 (31%), Positives = 54/119 (45%)
 Frame = +3

Query: 888  SPKCGGCNRPVLENYLSAMDTVWHPECFVCGDCFSSFSTGSFFELDGRPFCELHYHQRRG 1067
            +P CG CN  +   +L AM   WHPE F C  C +S +   F E     +CE  Y Q   
Sbjct: 438  TPLCGHCNNVIRGPFLVAMGRSWHPEEFTCAYCKTSLADVCFVEEQNNVYCERCYEQFFA 497

Query: 1068 TLCHGCGQPITGRCISAMGYKFHPEHFVCDFCLMQLSKGIFREQNDKTYCQPCFNKLFT 1244
             LC  C   I G  + A+   +H   FVC  C       +F  ++ + YC+  +  LF+
Sbjct: 498  PLCAKCNTKIMGEVMHALRQTWHTTCFVCAACKKPFGNSLFHMEDGEPYCEKDYINLFS 556



 Score = 52.8 bits (125), Expect = 1e-06
 Identities = 22/60 (36%), Positives = 31/60 (51%)
 Frame = +3

Query: 1062 RGTLCHGCGQPITGRCISAMGYKFHPEHFVCDFCLMQLSKGIFREQNDKTYCQPCFNKLF 1241
            R  LC  C   I G  + AMG  +HPE F C +C   L+   F E+ +  YC+ C+ + F
Sbjct: 437  RTPLCGHCNNVIRGPFLVAMGRSWHPEEFTCAYCKTSLADVCFVEEQNNVYCERCYEQFF 496


  Database: RefSeq49_HP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 18,297,164
  Number of sequences in database:  32,964
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 32964
Number of Hits to DB: 70,102,985
Number of extensions: 1950143
Number of successful extensions: 8902
Number of sequences better than 1.0e-05: 114
Number of HSP's gapped: 8130
Number of HSP's successfully gapped: 345
Length of query: 583
Length of database: 18,297,164
Length adjustment: 108
Effective length of query: 475
Effective length of database: 14,737,052
Effective search space: 7000099700
Effective search space used: 7000099700
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)

BLASTN 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-013458
         (1751 letters)

Database: Sscrofa_10.2.fasta 
           4582 sequences; 2,808,509,378 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Sscrofa_Chr02                                                         856   0.0  

>Sscrofa_Chr02 
||          Length = 162569375

 Score =  856 bits (432), Expect = 0.0
 Identities = 432/432 (100%)
 Strand = Plus / Plus

                                                                            
Query: 980      ggactgctttagcagtttttctaccggctccttctttgaactggatgggcgtcccttctg 1039
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12242153 ggactgctttagcagtttttctaccggctccttctttgaactggatgggcgtcccttctg 12242212

                                                                            
Query: 1040     tgagctccattaccatcaacgccgaggaaccctctgccatgggtgtgggcagcccatcac 1099
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12242213 tgagctccattaccatcaacgccgaggaaccctctgccatgggtgtgggcagcccatcac 12242272

                                                                            
Query: 1100     cggccgctgcatcagtgccatgggctacaagttccatcctgagcacttcgtatgtgattt 1159
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12242273 cggccgctgcatcagtgccatgggctacaagttccatcctgagcacttcgtatgtgattt 12242332

                                                                            
Query: 1160     ctgcctgatgcagctgtcgaagggcatcttcagggagcagaatgacaagacctattgtca 1219
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12242333 ctgcctgatgcagctgtcgaagggcatcttcagggagcagaatgacaagacctattgtca 12242392

                                                                            
Query: 1220     gccctgcttcaataagctcttcacacagtaatctcagctgaacccagatttgctagaaaa 1279
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12242393 gccctgcttcaataagctcttcacacagtaatctcagctgaacccagatttgctagaaaa 12242452

                                                                            
Query: 1280     tgtaaaccaagagaggaaaaagtatatttgtagttactgatcttctgctcaataggctta 1339
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12242453 tgtaaaccaagagaggaaaaagtatatttgtagttactgatcttctgctcaataggctta 12242512

                                                                            
Query: 1340     tagagaaagcaaaggtgatgaacaaagaaggtaacatctcaatattacatggctgggctt 1399
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12242513 tagagaaagcaaaggtgatgaacaaagaaggtaacatctcaatattacatggctgggctt 12242572

                            
Query: 1400     atagtcttaagg 1411
                ||||||||||||
Sbjct: 12242573 atagtcttaagg 12242584



 Score =  559 bits (282), Expect = e-156
 Identities = 291/293 (99%), Gaps = 1/293 (0%)
 Strand = Plus / Plus

                                                                            
Query: 1451     aaatcaggtacttgaatttagatctggcatatgctgtctagtgcctctgcagatgtgttt 1510
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12242624 aaatcaggtacttgaatttagatctggcatatgctgtctagtgcctctgcagatgtgttt 12242683

                                                                            
Query: 1511     tctccatgcacaaattccttccaccacgggtatactcggatttcttcattttcaacccta 1570
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12242684 tctccatgcacaaattccttccaccacgggtatactcggatttcttcattttcaacccta 12242743

                                                                            
Query: 1571     tgatggccttactggtaccttctcttttttggtcctcataaatgggtcttttaagctact 1630
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12242744 tgatggccttactggtaccttctcttttttggtcctcataaatgggtcttttaagctact 12242803

                                                                            
Query: 1631     cacatttccctgtgactcacttt-ccacagtcactgccatggattttattctggctgtta 1689
                ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 12242804 cacatttccctgtgactcactttcccacagtcactgccatggattttattctggctgtta 12242863

                                                                     
Query: 1690     gaaatcatgacacgactcttaagctccttgcatttcccttcaggntgtttctc 1742
                |||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 12242864 gaaatcatgacacgactcttaagctccttgcatttcccttcagggtgtttctc 12242916



 Score =  349 bits (176), Expect = 3e-93
 Identities = 176/176 (100%)
 Strand = Plus / Plus

                                                                            
Query: 574      agatgatccatgctctagggcaagcgtggcatccagaacacttcgtctgcgctcactgca 633
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12197292 agatgatccatgctctagggcaagcgtggcatccagaacacttcgtctgcgctcactgca 12197351

                                                                            
Query: 634      aagaagagattggctccagtcccttctttgagcggactggcctggcctactgctccaagg 693
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12197352 aagaagagattggctccagtcccttctttgagcggactggcctggcctactgctccaagg 12197411

                                                                        
Query: 694      actaccaccaccttttttctccacgctgtgcttactgtgctgctcctattctggat 749
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12197412 actaccaccaccttttttctccacgctgtgcttactgtgctgctcctattctggat 12197467



 Score =  319 bits (161), Expect = 3e-84
 Identities = 161/161 (100%)
 Strand = Plus / Plus

                                                                            
Query: 102      gatgccttgttggaggagctggaacactccacccttcaggagagtgatgaatacgacagc 161
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12206203 gatgccttgttggaggagctggaacactccacccttcaggagagtgatgaatacgacagc 12206262

                                                                            
Query: 162      ccagcctctctttccctggatgggcattccaaaaaggagagtgaccttgctgagacttca 221
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12206263 ccagcctctctttccctggatgggcattccaaaaaggagagtgaccttgctgagacttca 12206322

                                                         
Query: 222      aaggtcccttctgctcaggatgacacaagttccttttcggt 262
                |||||||||||||||||||||||||||||||||||||||||
Sbjct: 12206323 aaggtcccttctgctcaggatgacacaagttccttttcggt 12206363



 Score =  303 bits (153), Expect = 2e-79
 Identities = 162/165 (98%)
 Strand = Plus / Plus

                                                                            
Query: 411      acagtgaaagcagatgccagcacgaaacacttaccagaaaagcaggatcccaagacctcc 470
                |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12195612 acagtgaaagtagatgccagcacgaaacacttaccagaaaagcaggatcccaagacctcc 12195671

                                                                            
Query: 471      ctggactcaatgttggggggtttggagcaggagctgcaggaccttggaattgccacagtg 530
                |||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||
Sbjct: 12195672 ctggactcaatgttggggggtttggagcaggaactgcaggacctcggaattgccacagtg 12195731

                                                             
Query: 531      cccaagggccattgtgcttcctgccagaaaccgatcgctggcaag 575
                |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12195732 cccaagggccattgtgcttcctgccagaaaccgatcgctggcaag 12195776



 Score =  301 bits (152), Expect = 7e-79
 Identities = 152/152 (100%)
 Strand = Plus / Plus

                                                                            
Query: 830      aggttttcatgagaaggacaagaagccatattgccggaaggatttcttagccatgttttc 889
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12241693 aggttttcatgagaaggacaagaagccatattgccggaaggatttcttagccatgttttc 12241752

                                                                            
Query: 890      acccaagtgtgggggctgcaaccgcccagtgttagaaaactacctctccgccatggacac 949
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12241753 acccaagtgtgggggctgcaaccgcccagtgttagaaaactacctctccgccatggacac 12241812

                                                
Query: 950      tgtttggcacccagagtgctttgtttgtgggg 981
                ||||||||||||||||||||||||||||||||
Sbjct: 12241813 tgtttggcacccagagtgctttgtttgtgggg 12241844



 Score =  198 bits (100), Expect = 7e-48
 Identities = 100/100 (100%)
 Strand = Plus / Plus

                                                                            
Query: 3        ttcagttcctttgtggtcctgttcttcagcacttgccaaagcagttcctcacaacctgtg 62
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12200892 ttcagttcctttgtggtcctgttcttcagcacttgccaaagcagttcctcacaacctgtg 12200951

                                                        
Query: 63       gtaccagggcatcttgggtgtgagacaatggaagagttgg 102
                ||||||||||||||||||||||||||||||||||||||||
Sbjct: 12200952 gtaccagggcatcttgggtgtgagacaatggaagagttgg 12200991



 Score =  194 bits (98), Expect = 1e-46
 Identities = 101/102 (99%)
 Strand = Plus / Plus

                                                                            
Query: 306      agtgaggtccaagagccaaaggagtcaccaccacctcctaaaacctcagcagcggctcag 365
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12191537 agtgaggtccaagagccaaaggagtcaccaccacctcctaaaacctcagcagcggctcag 12191596

                                                          
Query: 366      ctggatgagctcatggcccacctttgtgaaatgcagatccag 407
                ||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 12191597 ctggatgagctcatggcccacctgtgtgaaatgcagatccag 12191638



 Score =  167 bits (84), Expect = 3e-38
 Identities = 84/84 (100%)
 Strand = Plus / Plus

                                                                            
Query: 750      aaagtactgacggccatggaccaaacctggcatcctgagcacttcttctgcgctcactgt 809
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12197579 aaagtactgacggccatggaccaaacctggcatcctgagcacttcttctgcgctcactgt 12197638

                                        
Query: 810      ggagaggtgtttggtgcagaaggt 833
                ||||||||||||||||||||||||
Sbjct: 12197639 ggagaggtgtttggtgcagaaggt 12197662



 Score = 95.6 bits (48), Expect = 8e-17
 Identities = 48/48 (100%)
 Strand = Plus / Plus

                                                                
Query: 260      ggtgcagctcgtgtataccaccaacatccaggagcccagagtctacag 307
                ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12213186 ggtgcagctcgtgtataccaccaacatccaggagcccagagtctacag 12213233


  Database: Sscrofa_10.2.fasta
    Posted date:  Nov 16, 2011 10:34 AM
  Number of letters in database: 2,808,509,378
  Number of sequences in database:  4582
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4582
Number of Hits to DB: 53,765,062
Number of extensions: 293
Number of successful extensions: 293
Number of sequences better than 1.0e-05: 1
Number of HSP's gapped: 292
Number of HSP's successfully gapped: 10
Length of query: 1751
Length of database: 2,808,509,378
Length adjustment: 22
Effective length of query: 1729
Effective length of database: 2,808,408,574
Effective search space: 4855738424446
Effective search space used: 4855738424446
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 18 (36.2 bits)
S2: 30 (60.0 bits)