Search to RefSeqCP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-013484
(1204 letters)
Database: RefSeq49_CP.fasta
33,336 sequences; 18,874,504 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_535669.2| PREDICTED: similar to Dual adapter for phosphot... 546 e-155
Alignment gi|XP_536302.2| PREDICTED: similar to Ras GTPase-activating pro... 82 8e-16
Alignment gi|XP_852038.1| PREDICTED: similar to Cytoplasmic protein NCK1 ... 71 2e-12
Alignment gi|XP_542797.2| PREDICTED: similar to Cytoplasmic protein NCK1 ... 71 2e-12
Alignment gi|XP_864796.1| PREDICTED: similar to non-catalytic region of t... 71 2e-12
Alignment gi|XP_852584.1| PREDICTED: similar to pleckstrin homology domai... 70 5e-12
Alignment gi|XP_865964.1| PREDICTED: similar to Pleckstrin homology domai... 70 5e-12
Alignment gi|XP_865952.1| PREDICTED: similar to pleckstrin homology domai... 70 5e-12
Alignment gi|XP_865932.1| PREDICTED: similar to Pleckstrin homology domai... 70 5e-12
Alignment gi|XP_865917.1| PREDICTED: similar to Pleckstrin homology domai... 70 5e-12
>ref|XP_535669.2| PREDICTED: similar to Dual adapter for phosphotyrosine and
3-phosphotyrosine and 3-phosphoinositide (hDAPP1) (B
cell adapter molecule of 32 kDa) (B lymphocyte adapter
protein Bam32) [Canis familiaris].
Length = 280
Score = 546 bits (1406), Expect = e-155
Identities = 264/280 (94%), Positives = 272/280 (97%)
Frame = +3
Query: 138 MGRAESPEGEMSTQDPLDLWSRLDGEAEPLQDLGWYHGNLTRHAAEALLLSNGRDGSYLL 317
MGRAES EG+MSTQDP DLWSR DG+AE LQ+LGWYHGNLTRHAAEALLLSNG DGSYLL
Sbjct: 1 MGRAESLEGKMSTQDPSDLWSRSDGDAELLQELGWYHGNLTRHAAEALLLSNGCDGSYLL 60
Query: 318 RDSNEKTGLYSLSVRAKDSVKHFHVEYTGYSLKFGFNEFSSVKDFVKHFANQPLIGSETG 497
RDSNE+TGLYSLSVRAKDSVKHFHVEYTGYS KFGFNEFSS+KDFVKHFANQPLIGSETG
Sbjct: 61 RDSNERTGLYSLSVRAKDSVKHFHVEYTGYSFKFGFNEFSSLKDFVKHFANQPLIGSETG 120
Query: 498 TLIVLKHPYPRKVEEPSIYESVRVHTAMQTGRTENDLVPTAPSLGTKEGYLTKQGGLVKT 677
TLIVLKHPYPRKVEEPSIYESVRVHTAMQTGRTENDLVPTAPSLGTKEGYLTKQGGLVKT
Sbjct: 121 TLIVLKHPYPRKVEEPSIYESVRVHTAMQTGRTENDLVPTAPSLGTKEGYLTKQGGLVKT 180
Query: 678 WKTRWFTLQRNELKYFKDQMSPEPIRILNLTECSAVQFDYSQERVNCFCLVFPFRTFYLC 857
WKTRWFTL RNELKYFKDQMSPEPIRIL+LTECSAVQFDYSQERVNCFCLVFPFRTFYLC
Sbjct: 181 WKTRWFTLHRNELKYFKDQMSPEPIRILDLTECSAVQFDYSQERVNCFCLVFPFRTFYLC 240
Query: 858 AKTGVEADEWIKILRWKLSQIRKQLDQGDSTVRSRSFIFK 977
AKTGVEADEWIKILRWKLSQIRKQLDQG+ T+RSRSFIFK
Sbjct: 241 AKTGVEADEWIKILRWKLSQIRKQLDQGEGTIRSRSFIFK 280
>ref|XP_536302.2| PREDICTED: similar to Ras GTPase-activating protein 1
(GTPase-activating protein) (GAP) (Ras p21 protein
activator) (p120GAP) (RasGAP) [Canis familiaris].
Length = 1127
Score = 82.4 bits (202), Expect = 8e-16
Identities = 67/250 (26%), Positives = 123/250 (49%), Gaps = 12/250 (4%)
Frame = +3
Query: 189 DLWSRLDGEAEPLQDLGWYHGNLTRHAAEALLLSNGRDGSYLLRDSNEKTGLYSLSVRAK 368
DL + E +P + W+HG +++ A LL++ G+ S+L+R S+ G YSL R
Sbjct: 414 DLVEEVGREEDPHEGKIWFHGKISKQEAYNLLMTVGQVCSFLVRPSDNTPGDYSLYFRTN 473
Query: 369 DSVKHFHVEYT-GYSLKFGFNEFSSVKDFVKHFANQPLIGSETGTLIVLKHPYPRKVEEP 545
++++ F + T G ++S+ D + H+ + ++ LK P P + +E
Sbjct: 474 ENIQRFKICPTPNNQFMMGGRYYNSIGDIIDHYRKEQIVEG-----YYLKEPVPMQDQEQ 528
Query: 546 SIYESVRVHTAMQTGR--TENDLVPTAPSLGTKEGYLTKQGGLVKTWKTRWFTLQRN--E 713
+ ++V T R T++ K+GYL K+ G K WK +F L+ + +
Sbjct: 529 VLNDTVDGKEIYNTIRRKTKDAFYKNI----VKKGYLLKK-GKGKRWKNLYFILEGSDAQ 583
Query: 714 LKYFK-DQMSPEPIRILNLTECSA-VQFDYSQERVNCFCLVFPFRT-----FYLCAKTGV 872
L YF+ ++ + +P +++L+ CS V D R NCF +V + FY +T
Sbjct: 584 LIYFESEKRATKPKGLIDLSVCSVYVVHDSLFGRPNCFQIVVQHFSEEHYIFYFAGETPE 643
Query: 873 EADEWIKILR 902
+A++W+K L+
Sbjct: 644 QAEDWMKGLQ 653
Score = 53.9 bits (128), Expect = 3e-07
Identities = 28/78 (35%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Frame = +3
Query: 240 WYHGNLTRHAAEALLLSNGRDGSYLLRDSNEKTGLYSLSVRAKDS-VKHFHVEYTGYSLK 416
WYHG L R AE L G+ GSYL+R+S+ + G + LS ++ S V HF +
Sbjct: 261 WYHGKLDRTIAEERLRQAGKSGSYLIRESDRRPGSFVLSFLSQTSVVNHFRIIAMCGDYY 320
Query: 417 FGFNEFSSVKDFVKHFAN 470
G FSS+ D + ++++
Sbjct: 321 IGGRRFSSLSDLIGYYSH 338
>ref|XP_852038.1| PREDICTED: similar to Cytoplasmic protein NCK1 (NCK adaptor protein
1) (SH2/SH3 adaptor protein NCK-alpha) isoform 2 [Canis
familiaris].
Length = 377
Score = 71.2 bits (173), Expect = 2e-12
Identities = 34/94 (36%), Positives = 55/94 (58%), Gaps = 1/94 (1%)
Frame = +3
Query: 240 WYHGNLTRHAAEALLLSNGRDGSYLLRDSNEKTGLYSLSVRAKDSVKHFHVEYTGYSLKF 419
WY+G +TRH AE L G +G +L+RDS +S+S++A+ KHF V+
Sbjct: 282 WYYGKVTRHQAEMALNERGHEGDFLIRDSESSPNDFSVSLKAQGKNKHFKVQLKETVYCI 341
Query: 420 GFNEFSSVKDFVKHFANQPLIGSETG-TLIVLKH 518
G +FS++++ V+H+ P+ SE G L ++KH
Sbjct: 342 GQRKFSTMEELVEHYKKAPIFTSEQGEKLYLIKH 375
>ref|XP_542797.2| PREDICTED: similar to Cytoplasmic protein NCK1 (NCK adaptor protein
1) (SH2/SH3 adaptor protein NCK-alpha) isoform 1 [Canis
familiaris].
Length = 313
Score = 71.2 bits (173), Expect = 2e-12
Identities = 34/94 (36%), Positives = 55/94 (58%), Gaps = 1/94 (1%)
Frame = +3
Query: 240 WYHGNLTRHAAEALLLSNGRDGSYLLRDSNEKTGLYSLSVRAKDSVKHFHVEYTGYSLKF 419
WY+G +TRH AE L G +G +L+RDS +S+S++A+ KHF V+
Sbjct: 218 WYYGKVTRHQAEMALNERGHEGDFLIRDSESSPNDFSVSLKAQGKNKHFKVQLKETVYCI 277
Query: 420 GFNEFSSVKDFVKHFANQPLIGSETG-TLIVLKH 518
G +FS++++ V+H+ P+ SE G L ++KH
Sbjct: 278 GQRKFSTMEELVEHYKKAPIFTSEQGEKLYLIKH 311
>ref|XP_864796.1| PREDICTED: similar to non-catalytic region of tyrosine kinase
adaptor protein 1 isoform 3 [Canis familiaris].
Length = 180
Score = 71.2 bits (173), Expect = 2e-12
Identities = 34/94 (36%), Positives = 55/94 (58%), Gaps = 1/94 (1%)
Frame = +3
Query: 240 WYHGNLTRHAAEALLLSNGRDGSYLLRDSNEKTGLYSLSVRAKDSVKHFHVEYTGYSLKF 419
WY+G +TRH AE L G +G +L+RDS +S+S++A+ KHF V+
Sbjct: 85 WYYGKVTRHQAEMALNERGHEGDFLIRDSESSPNDFSVSLKAQGKNKHFKVQLKETVYCI 144
Query: 420 GFNEFSSVKDFVKHFANQPLIGSETG-TLIVLKH 518
G +FS++++ V+H+ P+ SE G L ++KH
Sbjct: 145 GQRKFSTMEELVEHYKKAPIFTSEQGEKLYLIKH 178
>ref|XP_852584.1| PREDICTED: similar to pleckstrin homology domain containing, family
A (phosphoinositide binding specific) member 1 isoform 5
[Canis familiaris].
Length = 404
Score = 69.7 bits (169), Expect = 5e-12
Identities = 38/97 (39%), Positives = 51/97 (52%), Gaps = 3/97 (3%)
Frame = +3
Query: 612 PTAPSLGTKEGYLTKQGGLVKTWKTRWFTLQRNELKYFKDQMSPEPIRILNLTECSAVQF 791
P S K GY KQG ++K WK R+F L N + YFK ++ EP+R++ L E VQ
Sbjct: 186 PPPDSAVIKAGYCVKQGAVMKNWKRRYFQLDENTIGYFKSELEKEPLRVIPLKEVHKVQE 245
Query: 792 DYSQE---RVNCFCLVFPFRTFYLCAKTGVEADEWIK 893
+ R N F +V RTFY+ A + E WIK
Sbjct: 246 CKQSDIMMRDNLFEIVTSSRTFYVQADSPEEMHSWIK 282
>ref|XP_865964.1| PREDICTED: similar to Pleckstrin homology domain-containing protein
family A member 1 (Tandem PH domain containing
protein-1) (TAPP-1) isoform 11 [Canis familiaris].
Length = 335
Score = 69.7 bits (169), Expect = 5e-12
Identities = 38/97 (39%), Positives = 51/97 (52%), Gaps = 3/97 (3%)
Frame = +3
Query: 612 PTAPSLGTKEGYLTKQGGLVKTWKTRWFTLQRNELKYFKDQMSPEPIRILNLTECSAVQF 791
P S K GY KQG ++K WK R+F L N + YFK ++ EP+R++ L E VQ
Sbjct: 186 PPPDSAVIKAGYCVKQGAVMKNWKRRYFQLDENTIGYFKSELEKEPLRVIPLKEVHKVQE 245
Query: 792 DYSQE---RVNCFCLVFPFRTFYLCAKTGVEADEWIK 893
+ R N F +V RTFY+ A + E WIK
Sbjct: 246 CKQSDIMMRDNLFEIVTSSRTFYVQADSPEEMHSWIK 282
>ref|XP_865952.1| PREDICTED: similar to pleckstrin homology domain containing, family
A (phosphoinositide binding specific) member 1 isoform
10 [Canis familiaris].
Length = 322
Score = 69.7 bits (169), Expect = 5e-12
Identities = 38/97 (39%), Positives = 51/97 (52%), Gaps = 3/97 (3%)
Frame = +3
Query: 612 PTAPSLGTKEGYLTKQGGLVKTWKTRWFTLQRNELKYFKDQMSPEPIRILNLTECSAVQF 791
P S K GY KQG ++K WK R+F L N + YFK ++ EP+R++ L E VQ
Sbjct: 186 PPPDSAVIKAGYCVKQGAVMKNWKRRYFQLDENTIGYFKSELEKEPLRVIPLKEVHKVQE 245
Query: 792 DYSQE---RVNCFCLVFPFRTFYLCAKTGVEADEWIK 893
+ R N F +V RTFY+ A + E WIK
Sbjct: 246 CKQSDIMMRDNLFEIVTSSRTFYVQADSPEEMHSWIK 282
>ref|XP_865932.1| PREDICTED: similar to Pleckstrin homology domain-containing protein
family A member 1 (Tandem PH domain containing
protein-1) (TAPP-1) isoform 9 [Canis familiaris].
Length = 335
Score = 69.7 bits (169), Expect = 5e-12
Identities = 38/97 (39%), Positives = 51/97 (52%), Gaps = 3/97 (3%)
Frame = +3
Query: 612 PTAPSLGTKEGYLTKQGGLVKTWKTRWFTLQRNELKYFKDQMSPEPIRILNLTECSAVQF 791
P S K GY KQG ++K WK R+F L N + YFK ++ EP+R++ L E VQ
Sbjct: 186 PPPDSAVIKAGYCVKQGAVMKNWKRRYFQLDENTIGYFKSELEKEPLRVIPLKEVHKVQE 245
Query: 792 DYSQE---RVNCFCLVFPFRTFYLCAKTGVEADEWIK 893
+ R N F +V RTFY+ A + E WIK
Sbjct: 246 CKQSDIMMRDNLFEIVTSSRTFYVQADSPEEMHSWIK 282
>ref|XP_865917.1| PREDICTED: similar to Pleckstrin homology domain-containing protein
family A member 1 (Tandem PH domain containing
protein-1) (TAPP-1) isoform 8 [Canis familiaris].
Length = 383
Score = 69.7 bits (169), Expect = 5e-12
Identities = 38/97 (39%), Positives = 51/97 (52%), Gaps = 3/97 (3%)
Frame = +3
Query: 612 PTAPSLGTKEGYLTKQGGLVKTWKTRWFTLQRNELKYFKDQMSPEPIRILNLTECSAVQF 791
P S K GY KQG ++K WK R+F L N + YFK ++ EP+R++ L E VQ
Sbjct: 186 PPPDSAVIKAGYCVKQGAVMKNWKRRYFQLDENTIGYFKSELEKEPLRVIPLKEVHKVQE 245
Query: 792 DYSQE---RVNCFCLVFPFRTFYLCAKTGVEADEWIK 893
+ R N F +V RTFY+ A + E WIK
Sbjct: 246 CKQSDIMMRDNLFEIVTSSRTFYVQADSPEEMHSWIK 282
Database: RefSeq49_CP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,874,504
Number of sequences in database: 33,336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33336
Number of Hits to DB: 51,245,488
Number of extensions: 1427012
Number of successful extensions: 5178
Number of sequences better than 1.0e-05: 60
Number of HSP's gapped: 5092
Number of HSP's successfully gapped: 62
Length of query: 401
Length of database: 18,874,504
Length adjustment: 105
Effective length of query: 296
Effective length of database: 15,374,224
Effective search space: 4550770304
Effective search space used: 4550770304
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Animal-Genome cDNA 20110601C-013484
Search to RefSeqBP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-013484
(1204 letters)
Database: RefSeq49_BP.fasta
33,088 sequences; 17,681,374 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001070359.1| dual adapter for phosphotyrosine and 3-phosp... 543 e-154
Alignment gi|NP_776874.1| ras GTPase-activating protein 1 [Bos taurus]. 83 6e-16
Alignment gi|NP_001069540.1| cytoplasmic protein NCK1 [Bos taurus]. 71 2e-12
Alignment gi|NP_001069061.1| pleckstrin homology domain containing, famil... 70 3e-12
Alignment gi|NP_001092506.1| cytoplasmic protein NCK2 [Bos taurus]. 67 2e-11
Alignment gi|NP_776850.1| 1-phosphatidylinositol-4,5-bisphosphate phospho... 67 3e-11
Alignment gi|XP_002694238.1| PREDICTED: MGC107851 protein-like [Bos tauru... 64 2e-10
Alignment gi|XP_605143.5| PREDICTED: protein-tyrosine phosphatase SHP-2b-... 64 2e-10
Alignment gi|XP_002694636.1| PREDICTED: protein tyrosine phosphatase, non... 64 3e-10
Alignment gi|NP_001091486.1| tyrosine-protein phosphatase non-receptor ty... 62 1e-09
>ref|NP_001070359.1| dual adapter for phosphotyrosine and 3-phosphotyrosine and
3-phosphoinositide [Bos taurus].
Length = 280
Score = 543 bits (1398), Expect = e-154
Identities = 263/280 (93%), Positives = 271/280 (96%)
Frame = +3
Query: 138 MGRAESPEGEMSTQDPLDLWSRLDGEAEPLQDLGWYHGNLTRHAAEALLLSNGRDGSYLL 317
MGRAES EG+MSTQDP DLWSR DGEAE LQDLGWYHGNLTRHAAEALLLSNG DGSYLL
Sbjct: 1 MGRAESLEGKMSTQDPSDLWSRSDGEAELLQDLGWYHGNLTRHAAEALLLSNGCDGSYLL 60
Query: 318 RDSNEKTGLYSLSVRAKDSVKHFHVEYTGYSLKFGFNEFSSVKDFVKHFANQPLIGSETG 497
RDSNE+ GLYSLSVRAKDSVKHFHVEYTGYS KFGFNEFSS++DFVKHFANQPLIGSETG
Sbjct: 61 RDSNERIGLYSLSVRAKDSVKHFHVEYTGYSFKFGFNEFSSLRDFVKHFANQPLIGSETG 120
Query: 498 TLIVLKHPYPRKVEEPSIYESVRVHTAMQTGRTENDLVPTAPSLGTKEGYLTKQGGLVKT 677
TLIVLKHPYP+KVEEPSIYESVRVHTAMQTGR+ENDLVPTAPSLGTKEGYLTKQGGLVKT
Sbjct: 121 TLIVLKHPYPKKVEEPSIYESVRVHTAMQTGRSENDLVPTAPSLGTKEGYLTKQGGLVKT 180
Query: 678 WKTRWFTLQRNELKYFKDQMSPEPIRILNLTECSAVQFDYSQERVNCFCLVFPFRTFYLC 857
WKTRWFTL RNELKYFKDQMSPEPIRIL+LTECSAVQFDYSQERVNCFCLVFPFRTFYLC
Sbjct: 181 WKTRWFTLHRNELKYFKDQMSPEPIRILDLTECSAVQFDYSQERVNCFCLVFPFRTFYLC 240
Query: 858 AKTGVEADEWIKILRWKLSQIRKQLDQGDSTVRSRSFIFK 977
AKTGVEADEWIKILRWKLSQIRKQLDQGD TVRSRSFIF+
Sbjct: 241 AKTGVEADEWIKILRWKLSQIRKQLDQGDGTVRSRSFIFQ 280
>ref|NP_776874.1| ras GTPase-activating protein 1 [Bos taurus].
Length = 1044
Score = 82.8 bits (203), Expect = 6e-16
Identities = 67/250 (26%), Positives = 123/250 (49%), Gaps = 12/250 (4%)
Frame = +3
Query: 189 DLWSRLDGEAEPLQDLGWYHGNLTRHAAEALLLSNGRDGSYLLRDSNEKTGLYSLSVRAK 368
DL + E +P + W+HG +++ A LL++ G+ S+L+R S+ G YSL R
Sbjct: 331 DLVEEVGREEDPHEGKIWFHGKISKQEAYNLLMTVGQACSFLVRPSDNTPGDYSLYFRTS 390
Query: 369 DSVKHFHVEYT-GYSLKFGFNEFSSVKDFVKHFANQPLIGSETGTLIVLKHPYPRKVEEP 545
++++ F + T G ++S+ D + H+ + ++ LK P P + +E
Sbjct: 391 ENIQRFKICPTPNNQFMMGGRYYNSIGDIIDHYRKEQIVEG-----YYLKEPVPMQDQEQ 445
Query: 546 SIYESVRVHTAMQTGR--TENDLVPTAPSLGTKEGYLTKQGGLVKTWKTRWFTLQRN--E 713
+ ++V T R T++ K+GYL K+ G K WK +F L+ + +
Sbjct: 446 VLNDAVDGKEIYNTIRRKTKDAFYKNI----VKKGYLLKK-GKGKRWKNLYFILEGSDAQ 500
Query: 714 LKYFK-DQMSPEPIRILNLTECSA-VQFDYSQERVNCFCLVFPFRT-----FYLCAKTGV 872
L YF+ ++ + +P +++L+ CS V D R NCF +V + FY +T
Sbjct: 501 LIYFESEKRATKPKGLIDLSVCSVYVVHDSLFGRPNCFQIVVQHFSEEHYIFYFAGETPE 560
Query: 873 EADEWIKILR 902
+A++W+K L+
Sbjct: 561 QAEDWMKGLQ 570
Score = 52.8 bits (125), Expect = 6e-07
Identities = 27/78 (34%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Frame = +3
Query: 240 WYHGNLTRHAAEALLLSNGRDGSYLLRDSNEKTGLYSLSVRAKDS-VKHFHVEYTGYSLK 416
WYHG L R AE L G+ GSYL+R+S+ + G + LS ++ + V HF +
Sbjct: 178 WYHGKLDRTIAEERLRQAGKSGSYLIRESDRRPGSFVLSFLSQTNVVNHFRIIAMCGDYY 237
Query: 417 FGFNEFSSVKDFVKHFAN 470
G FSS+ D + ++++
Sbjct: 238 IGGRRFSSLSDLIGYYSH 255
>ref|NP_001069540.1| cytoplasmic protein NCK1 [Bos taurus].
Length = 377
Score = 71.2 bits (173), Expect = 2e-12
Identities = 34/94 (36%), Positives = 55/94 (58%), Gaps = 1/94 (1%)
Frame = +3
Query: 240 WYHGNLTRHAAEALLLSNGRDGSYLLRDSNEKTGLYSLSVRAKDSVKHFHVEYTGYSLKF 419
WY+G +TRH AE L G +G +L+RDS +S+S++A+ KHF V+
Sbjct: 282 WYYGKVTRHQAEMALNERGHEGDFLIRDSESSPNDFSVSLKAQGKNKHFKVQLKETVYCI 341
Query: 420 GFNEFSSVKDFVKHFANQPLIGSETG-TLIVLKH 518
G +FS++++ V+H+ P+ SE G L ++KH
Sbjct: 342 GQRKFSTMEELVEHYKKAPIFTSEQGEKLYLIKH 375
>ref|NP_001069061.1| pleckstrin homology domain containing, family A (phosphoinositide
binding specific) member 1 [Bos taurus].
Length = 383
Score = 70.5 bits (171), Expect = 3e-12
Identities = 38/97 (39%), Positives = 52/97 (53%), Gaps = 3/97 (3%)
Frame = +3
Query: 612 PTAPSLGTKEGYLTKQGGLVKTWKTRWFTLQRNELKYFKDQMSPEPIRILNLTECSAVQF 791
P + S K GY KQG ++K WK R+F L N + YFK ++ EP+R++ L E VQ
Sbjct: 186 PPSDSAVIKAGYCVKQGAVMKNWKRRYFQLDENTIGYFKSELEKEPLRVIPLKEVHKVQE 245
Query: 792 DYSQE---RVNCFCLVFPFRTFYLCAKTGVEADEWIK 893
+ R N F +V RTFY+ A + E WIK
Sbjct: 246 CKQSDIMMRDNLFEIVTSSRTFYVQADSPEEMHSWIK 282
>ref|NP_001092506.1| cytoplasmic protein NCK2 [Bos taurus].
Length = 376
Score = 67.4 bits (163), Expect = 2e-11
Identities = 32/91 (35%), Positives = 49/91 (53%)
Frame = +3
Query: 240 WYHGNLTRHAAEALLLSNGRDGSYLLRDSNEKTGLYSLSVRAKDSVKHFHVEYTGYSLKF 419
WY+GN+TRH AE L + G G +L+RDS +S+S++A KHF V+
Sbjct: 281 WYYGNVTRHQAECALNARGVQGDFLVRDSESSPSDFSVSLKASGKNKHFKVQLVDNVYCI 340
Query: 420 GFNEFSSVKDFVKHFANQPLIGSETGTLIVL 512
G F ++ + V+H+ P+ SE G + L
Sbjct: 341 GQRRFHTMDELVEHYKKAPIFTSEHGEKLYL 371
>ref|NP_776850.1| 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma-1
[Bos taurus].
Length = 1291
Score = 67.0 bits (162), Expect = 3e-11
Identities = 31/80 (38%), Positives = 49/80 (61%)
Frame = +3
Query: 240 WYHGNLTRHAAEALLLSNGRDGSYLLRDSNEKTGLYSLSVRAKDSVKHFHVEYTGYSLKF 419
WYH +LTR AE +L+ RDG++L+R NE Y++S RA+ +KH V+ G ++
Sbjct: 668 WYHASLTRAQAEHMLMRVPRDGAFLVRKRNEPNS-YAISFRAEGKIKHCRVQQEGQTVML 726
Query: 420 GFNEFSSVKDFVKHFANQPL 479
G +EF S+ D + ++ PL
Sbjct: 727 GNSEFDSLVDLISYYEKHPL 746
>ref|XP_002694238.1| PREDICTED: MGC107851 protein-like [Bos taurus].
Length = 646
Score = 64.3 bits (155), Expect = 2e-10
Identities = 34/97 (35%), Positives = 57/97 (58%), Gaps = 3/97 (3%)
Frame = +3
Query: 240 WYHGNLTRHAAEALLLSNGRDGSYLLRDSNEKTGLYSLSVRAKDSVKHFHVEYTG-YSLK 416
W+H N++ AE LL+S+G+ GS+L R S G ++LSVR + V H ++ TG Y
Sbjct: 6 WFHPNISGVEAEQLLMSSGQHGSFLARPSKSCPGGFTLSVRRHNEVTHIKIQNTGDYYDL 65
Query: 417 FGFNEFSSVKDFVKHFANQ--PLIGSETGTLIVLKHP 521
+G +F+++ + V+H+ Q L+ G + L+HP
Sbjct: 66 YGGEKFATLAELVQHYTGQHGGLLRERGGAPVELRHP 102
Score = 55.1 bits (131), Expect = 1e-07
Identities = 40/146 (27%), Positives = 66/146 (45%), Gaps = 10/146 (6%)
Frame = +3
Query: 240 WYHGNLTRHAAEALLLSNGRDGSYLLRDSNEKTGLYSLSVRAKD--------SVKH--FH 389
WYHG+L+ AE LL+ GR GS+L+R+S K G + LSV + V H H
Sbjct: 113 WYHGHLSGKEAEKLLMEKGRPGSFLVRESQSKPGDFVLSVLTQQLDRVDRQPRVTHIMIH 172
Query: 390 VEYTGYSLKFGFNEFSSVKDFVKHFANQPLIGSETGTLIVLKHPYPRKVEEPSIYESVRV 569
+ G G +F ++ D V+ + P++ +G ++ L+ P ++ R+
Sbjct: 173 FQPDGKYDVGGGEQFDTLGDLVERYRKNPMV-ERSGVVVHLRQP----------LKATRI 221
Query: 570 HTAMQTGRTENDLVPTAPSLGTKEGY 647
A R + T S K+G+
Sbjct: 222 SAASIESRVQELSEATDASEKAKQGF 247
>ref|XP_605143.5| PREDICTED: protein-tyrosine phosphatase SHP-2b-like [Bos taurus].
Length = 695
Score = 64.3 bits (155), Expect = 2e-10
Identities = 34/97 (35%), Positives = 57/97 (58%), Gaps = 3/97 (3%)
Frame = +3
Query: 240 WYHGNLTRHAAEALLLSNGRDGSYLLRDSNEKTGLYSLSVRAKDSVKHFHVEYTG-YSLK 416
W+H N++ AE LL+S+G+ GS+L R S G ++LSVR + V H ++ TG Y
Sbjct: 6 WFHPNISGVEAEQLLMSSGQHGSFLARPSKSCPGGFTLSVRRHNEVTHIKIQNTGDYYDL 65
Query: 417 FGFNEFSSVKDFVKHFANQ--PLIGSETGTLIVLKHP 521
+G +F+++ + V+H+ Q L+ G + L+HP
Sbjct: 66 YGGEKFATLAELVQHYTGQHGGLLRERGGAPVELRHP 102
Score = 55.1 bits (131), Expect = 1e-07
Identities = 40/146 (27%), Positives = 66/146 (45%), Gaps = 10/146 (6%)
Frame = +3
Query: 240 WYHGNLTRHAAEALLLSNGRDGSYLLRDSNEKTGLYSLSVRAKD--------SVKH--FH 389
WYHG+L+ AE LL+ GR GS+L+R+S K G + LSV + V H H
Sbjct: 113 WYHGHLSGKEAEKLLMEKGRPGSFLVRESQSKPGDFVLSVLTQQLDRVDRQPRVTHIMIH 172
Query: 390 VEYTGYSLKFGFNEFSSVKDFVKHFANQPLIGSETGTLIVLKHPYPRKVEEPSIYESVRV 569
+ G G +F ++ D V+ + P++ +G ++ L+ P ++ R+
Sbjct: 173 FQPDGKYDVGGGEQFDTLGDLVERYRKNPMV-ERSGVVVHLRQP----------LKATRI 221
Query: 570 HTAMQTGRTENDLVPTAPSLGTKEGY 647
A R + T S K+G+
Sbjct: 222 SAASIESRVQELSEATDASEKAKQGF 247
>ref|XP_002694636.1| PREDICTED: protein tyrosine phosphatase, non-receptor type 11-like
[Bos taurus].
Length = 722
Score = 63.9 bits (154), Expect = 3e-10
Identities = 39/115 (33%), Positives = 64/115 (55%), Gaps = 2/115 (1%)
Frame = +3
Query: 183 PLDLWSRLDGEAEPLQDLGWYHGNLTRHAAEALLLSNGRDGSYLLRDSNEKTGLYSLSVR 362
P SR G+A + W+H N+T AE LLL+ G DGS+L R S G ++LSVR
Sbjct: 117 PRSSGSRSPGDARQ-DGVRWFHPNITGVEAENLLLTRGVDGSFLARPSKSNPGDFTLSVR 175
Query: 363 AKDSVKHFHVEYTG-YSLKFGFNEFSSVKDFVKHF-ANQPLIGSETGTLIVLKHP 521
+V H ++ TG Y +G +F+++ + V+++ + + + G +I LK+P
Sbjct: 176 RNGAVTHIKIQNTGDYYDLYGGEKFATLAELVQYYMEHHGQLKEKNGDVIELKYP 230
Score = 60.1 bits (144), Expect = 4e-09
Identities = 37/105 (35%), Positives = 53/105 (50%), Gaps = 11/105 (10%)
Frame = +3
Query: 240 WYHGNLTRHAAEALLLSNGRDGSYLLRDSNEKTGLYSLSVRAKD--------SVKHFHVE 395
W+HG+L+ AE LL G+ GS+L+R+S G + LSVR D K HV
Sbjct: 241 WFHGHLSGKEAEKLLTEKGKHGSFLVRESQSHPGDFVLSVRTGDDKGESNDAKSKVTHVM 300
Query: 396 YTGYSLKF---GFNEFSSVKDFVKHFANQPLIGSETGTLIVLKHP 521
LK+ G F S+ D V+H+ P++ GT++ LK P
Sbjct: 301 IRCQELKYDVGGGERFDSLTDLVEHYKKNPMV-ETLGTVLQLKQP 344
>ref|NP_001091486.1| tyrosine-protein phosphatase non-receptor type 6 [Bos taurus].
Length = 593
Score = 61.6 bits (148), Expect = 1e-09
Identities = 35/97 (36%), Positives = 57/97 (58%), Gaps = 3/97 (3%)
Frame = +3
Query: 240 WYHGNLTRHAAEALLLSNGRDGSYLLRDSNEKTGLYSLSVRAKDSVKHFHVEYTG--YSL 413
W+H +L+ AE LL G GS+L R S + G +SLSVR D V H ++ +G Y L
Sbjct: 4 WFHRDLSGLDAETLLKGRGVHGSFLARPSRKNQGDFSLSVRVGDQVTHIRIQNSGDFYDL 63
Query: 414 KFGFNEFSSVKDFVKHFANQP-LIGSETGTLIVLKHP 521
+G +F+++ + V+++ Q ++ GT+I LK+P
Sbjct: 64 -YGGEKFATLTELVEYYTQQQGVLQDRDGTIIHLKYP 99
Database: RefSeq49_BP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 17,681,374
Number of sequences in database: 33,088
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33088
Number of Hits to DB: 49,173,047
Number of extensions: 1385392
Number of successful extensions: 4846
Number of sequences better than 1.0e-05: 49
Number of HSP's gapped: 4766
Number of HSP's successfully gapped: 53
Length of query: 401
Length of database: 17,681,374
Length adjustment: 104
Effective length of query: 297
Effective length of database: 14,240,222
Effective search space: 4229345934
Effective search space used: 4229345934
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to RefSeqSP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-013484
(1204 letters)
Database: RefSeq49_SP.fasta
24,897 sequences; 11,343,932 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_003129348.2| PREDICTED: dual adapter for phosphotyrosine ... 505 e-143
Alignment gi|XP_003123824.1| PREDICTED: ras GTPase-activating protein 1, ... 84 2e-16
Alignment gi|XP_003354255.1| PREDICTED: ras GTPase-activating protein 1-l... 84 2e-16
Alignment gi|NP_001131102.1| cytoplasmic protein NCK1 [Sus scrofa]. 73 3e-13
Alignment gi|XP_003359434.1| PREDICTED: pleckstrin homology domain-contai... 70 3e-12
Alignment gi|XP_001927224.1| PREDICTED: pleckstrin homology domain-contai... 70 3e-12
Alignment gi|NP_001131103.1| cytoplasmic protein NCK2 [Sus scrofa]. 67 2e-11
Alignment gi|XP_003134490.1| PREDICTED: 1-phosphatidylinositol-4,5-bispho... 67 2e-11
Alignment gi|XP_003355638.1| PREDICTED: tyrosine-protein phosphatase non-... 62 8e-10
Alignment gi|XP_003359164.1| PREDICTED: tyrosine-protein phosphatase non-... 60 2e-09
>ref|XP_003129348.2| PREDICTED: dual adapter for phosphotyrosine and 3-phosphotyrosine
and 3-phosphoinositide-like [Sus scrofa].
Length = 458
Score = 505 bits (1300), Expect = e-143
Identities = 246/248 (99%), Positives = 246/248 (99%)
Frame = +3
Query: 234 LGWYHGNLTRHAAEALLLSNGRDGSYLLRDSNEKTGLYSLSVRAKDSVKHFHVEYTGYSL 413
L WYHGNLTRHAAEALLLSNGRDGSYLLRDSNEKTGLYSLSVRAKDSVKHFHVEYTGYSL
Sbjct: 211 LRWYHGNLTRHAAEALLLSNGRDGSYLLRDSNEKTGLYSLSVRAKDSVKHFHVEYTGYSL 270
Query: 414 KFGFNEFSSVKDFVKHFANQPLIGSETGTLIVLKHPYPRKVEEPSIYESVRVHTAMQTGR 593
KFGFNEFSSVKDFVKHFANQPLIGSETGTLIVLKHPY RKVEEPSIYESVRVHTAMQTGR
Sbjct: 271 KFGFNEFSSVKDFVKHFANQPLIGSETGTLIVLKHPYSRKVEEPSIYESVRVHTAMQTGR 330
Query: 594 TENDLVPTAPSLGTKEGYLTKQGGLVKTWKTRWFTLQRNELKYFKDQMSPEPIRILNLTE 773
TENDLVPTAPSLGTKEGYLTKQGGLVKTWKTRWFTLQRNELKYFKDQMSPEPIRILNLTE
Sbjct: 331 TENDLVPTAPSLGTKEGYLTKQGGLVKTWKTRWFTLQRNELKYFKDQMSPEPIRILNLTE 390
Query: 774 CSAVQFDYSQERVNCFCLVFPFRTFYLCAKTGVEADEWIKILRWKLSQIRKQLDQGDSTV 953
CSAVQFDYSQERVNCFCLVFPFRTFYLCAKTGVEADEWIKILRWKLSQIRKQLDQGDSTV
Sbjct: 391 CSAVQFDYSQERVNCFCLVFPFRTFYLCAKTGVEADEWIKILRWKLSQIRKQLDQGDSTV 450
Query: 954 RSRSFIFK 977
RSRSFIFK
Sbjct: 451 RSRSFIFK 458
Score = 87.8 bits (216), Expect = 1e-17
Identities = 41/47 (87%), Positives = 44/47 (93%)
Frame = +3
Query: 240 WYHGNLTRHAAEALLLSNGRDGSYLLRDSNEKTGLYSLSVRAKDSVK 380
WYHGNLTRHAAEALLLSNGRDGSYLLRDSNEKTGLYSLSVR +++
Sbjct: 92 WYHGNLTRHAAEALLLSNGRDGSYLLRDSNEKTGLYSLSVRGPLTIR 138
>ref|XP_003123824.1| PREDICTED: ras GTPase-activating protein 1, partial [Sus scrofa].
Length = 771
Score = 83.6 bits (205), Expect = 2e-16
Identities = 68/250 (27%), Positives = 123/250 (49%), Gaps = 12/250 (4%)
Frame = +3
Query: 189 DLWSRLDGEAEPLQDLGWYHGNLTRHAAEALLLSNGRDGSYLLRDSNEKTGLYSLSVRAK 368
DL + E +P + W+HG +++ A LL++ G+ S+L+R S+ G YSL R
Sbjct: 58 DLVEEVGREEDPHEGKIWFHGKISKQEAYNLLMTVGQVCSFLVRPSDNTPGDYSLYFRTN 117
Query: 369 DSVKHFHVEYT-GYSLKFGFNEFSSVKDFVKHFANQPLIGSETGTLIVLKHPYPRKVEEP 545
++++ F + T G ++S+ D + H+ + ++ LK P P + +E
Sbjct: 118 ENIQRFKICPTPNNQFMMGGRYYNSIGDIIDHYRKEQIVEG-----YYLKEPVPMQDQEQ 172
Query: 546 SIYESVRVHTAMQTGR--TENDLVPTAPSLGTKEGYLTKQGGLVKTWKTRWFTLQRN--E 713
+ E+V T R T++ K+GYL K+ G K WK +F L+ + +
Sbjct: 173 VLNETVDGKEIYNTIRRKTKDAFYKNI----VKKGYLLKK-GKGKRWKNLYFILEGSDAQ 227
Query: 714 LKYFK-DQMSPEPIRILNLTECSA-VQFDYSQERVNCFCLVFPFRT-----FYLCAKTGV 872
L YF+ ++ + +P +++L+ CS V D R NCF +V + FY +T
Sbjct: 228 LIYFESEKRATKPKGLIDLSVCSVYVVHDSLFGRPNCFQIVVQHFSEEHYIFYFAGETPE 287
Query: 873 EADEWIKILR 902
+A++W+K L+
Sbjct: 288 QAEDWMKGLQ 297
>ref|XP_003354255.1| PREDICTED: ras GTPase-activating protein 1-like [Sus scrofa].
Length = 1040
Score = 83.6 bits (205), Expect = 2e-16
Identities = 68/250 (27%), Positives = 123/250 (49%), Gaps = 12/250 (4%)
Frame = +3
Query: 189 DLWSRLDGEAEPLQDLGWYHGNLTRHAAEALLLSNGRDGSYLLRDSNEKTGLYSLSVRAK 368
DL + E +P + W+HG +++ A LL++ G+ S+L+R S+ G YSL R
Sbjct: 327 DLVEEVGREEDPHEGKIWFHGKISKQEAYNLLMTVGQVCSFLVRPSDNTPGDYSLYFRTN 386
Query: 369 DSVKHFHVEYT-GYSLKFGFNEFSSVKDFVKHFANQPLIGSETGTLIVLKHPYPRKVEEP 545
++++ F + T G ++S+ D + H+ + ++ LK P P + +E
Sbjct: 387 ENIQRFKICPTPNNQFMMGGRYYNSIGDIIDHYRKEQIVEG-----YYLKEPVPMQDQEQ 441
Query: 546 SIYESVRVHTAMQTGR--TENDLVPTAPSLGTKEGYLTKQGGLVKTWKTRWFTLQRN--E 713
+ E+V T R T++ K+GYL K+ G K WK +F L+ + +
Sbjct: 442 VLNETVDGKEIYNTIRRKTKDAFYKNI----VKKGYLLKK-GKGKRWKNLYFILEGSDAQ 496
Query: 714 LKYFK-DQMSPEPIRILNLTECSA-VQFDYSQERVNCFCLVFPFRT-----FYLCAKTGV 872
L YF+ ++ + +P +++L+ CS V D R NCF +V + FY +T
Sbjct: 497 LIYFESEKRATKPKGLIDLSVCSVYVVHDSLFGRPNCFQIVVQHFSEEHYIFYFAGETPE 556
Query: 873 EADEWIKILR 902
+A++W+K L+
Sbjct: 557 QAEDWMKGLQ 566
Score = 52.8 bits (125), Expect = 4e-07
Identities = 27/78 (34%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Frame = +3
Query: 240 WYHGNLTRHAAEALLLSNGRDGSYLLRDSNEKTGLYSLSVRAKDS-VKHFHVEYTGYSLK 416
WYHG L R AE L G+ GSYL+R+S+ + G + LS ++ + V HF +
Sbjct: 174 WYHGKLDRTIAEERLRQAGKSGSYLIRESDRRPGSFVLSFLSQTNVVNHFRIIAMCGDYY 233
Query: 417 FGFNEFSSVKDFVKHFAN 470
G FSS+ D + ++++
Sbjct: 234 IGGRRFSSLSDLIGYYSH 251
>ref|NP_001131102.1| cytoplasmic protein NCK1 [Sus scrofa].
Length = 377
Score = 73.2 bits (178), Expect = 3e-13
Identities = 35/94 (37%), Positives = 56/94 (59%), Gaps = 1/94 (1%)
Frame = +3
Query: 240 WYHGNLTRHAAEALLLSNGRDGSYLLRDSNEKTGLYSLSVRAKDSVKHFHVEYTGYSLKF 419
WY+G +TRH AE L GR+G +L+RDS +S+S++A+ KHF V+
Sbjct: 282 WYYGKVTRHQAEMALNERGREGDFLIRDSESSPNDFSVSLKAQGKNKHFKVQLKETLYCI 341
Query: 420 GFNEFSSVKDFVKHFANQPLIGSETG-TLIVLKH 518
G +FS++++ V+H+ P+ SE G L ++KH
Sbjct: 342 GQRKFSTMEELVEHYKKAPIFTSEQGEKLYLIKH 375
>ref|XP_003359434.1| PREDICTED: pleckstrin homology domain-containing family A member
1-like [Sus scrofa].
Length = 402
Score = 69.7 bits (169), Expect = 3e-12
Identities = 38/97 (39%), Positives = 51/97 (52%), Gaps = 3/97 (3%)
Frame = +3
Query: 612 PTAPSLGTKEGYLTKQGGLVKTWKTRWFTLQRNELKYFKDQMSPEPIRILNLTECSAVQF 791
P S K GY KQG ++K WK R+F L N + YFK ++ EP+R++ L E VQ
Sbjct: 186 PPPDSAVIKAGYCVKQGAVMKNWKRRYFQLDENTIGYFKSELEKEPLRVIPLKEVHKVQE 245
Query: 792 DYSQE---RVNCFCLVFPFRTFYLCAKTGVEADEWIK 893
+ R N F +V RTFY+ A + E WIK
Sbjct: 246 CKQSDIMMRDNLFEIVTSSRTFYVQADSPEEMHSWIK 282
>ref|XP_001927224.1| PREDICTED: pleckstrin homology domain-containing family A member 1
[Sus scrofa].
Length = 402
Score = 69.7 bits (169), Expect = 3e-12
Identities = 38/97 (39%), Positives = 51/97 (52%), Gaps = 3/97 (3%)
Frame = +3
Query: 612 PTAPSLGTKEGYLTKQGGLVKTWKTRWFTLQRNELKYFKDQMSPEPIRILNLTECSAVQF 791
P S K GY KQG ++K WK R+F L N + YFK ++ EP+R++ L E VQ
Sbjct: 186 PPPDSAVIKAGYCVKQGAVMKNWKRRYFQLDENTIGYFKSELEKEPLRVIPLKEVHKVQE 245
Query: 792 DYSQE---RVNCFCLVFPFRTFYLCAKTGVEADEWIK 893
+ R N F +V RTFY+ A + E WIK
Sbjct: 246 CKQSDIMMRDNLFEIVTSSRTFYVQADSPEEMHSWIK 282
>ref|NP_001131103.1| cytoplasmic protein NCK2 [Sus scrofa].
Length = 376
Score = 67.4 bits (163), Expect = 2e-11
Identities = 32/91 (35%), Positives = 49/91 (53%)
Frame = +3
Query: 240 WYHGNLTRHAAEALLLSNGRDGSYLLRDSNEKTGLYSLSVRAKDSVKHFHVEYTGYSLKF 419
WY+GN+TRH AE L + G G +L+RDS +S+S++A KHF V+
Sbjct: 281 WYYGNVTRHQAECALNARGVQGDFLVRDSESSPSDFSVSLKASGKNKHFKVQLVDNVYCI 340
Query: 420 GFNEFSSVKDFVKHFANQPLIGSETGTLIVL 512
G F ++ + V+H+ P+ SE G + L
Sbjct: 341 GQRRFHTMDELVEHYKKAPIFTSEHGEKLYL 371
>ref|XP_003134490.1| PREDICTED: 1-phosphatidylinositol-4,5-bisphosphate
phosphodiesterase gamma-1-like [Sus scrofa].
Length = 1374
Score = 67.4 bits (163), Expect = 2e-11
Identities = 32/80 (40%), Positives = 49/80 (61%)
Frame = +3
Query: 240 WYHGNLTRHAAEALLLSNGRDGSYLLRDSNEKTGLYSLSVRAKDSVKHFHVEYTGYSLKF 419
WYH +LTR AE +L+ RDG++L+R NE Y++S RA+ +KH V+ G ++
Sbjct: 751 WYHASLTRAQAEHMLMRVPRDGAFLVRKRNEPNS-YAISFRAEGKIKHCRVQQEGQTVML 809
Query: 420 GFNEFSSVKDFVKHFANQPL 479
G +EF S+ D V ++ PL
Sbjct: 810 GNSEFDSLVDLVSYYEKHPL 829
>ref|XP_003355638.1| PREDICTED: tyrosine-protein phosphatase non-receptor type 6 [Sus
scrofa].
Length = 595
Score = 61.6 bits (148), Expect = 8e-10
Identities = 35/97 (36%), Positives = 57/97 (58%), Gaps = 3/97 (3%)
Frame = +3
Query: 240 WYHGNLTRHAAEALLLSNGRDGSYLLRDSNEKTGLYSLSVRAKDSVKHFHVEYTG--YSL 413
W+H +L+ AE LL G GS+L R S + G +SLSVR D V H ++ +G Y L
Sbjct: 4 WFHRDLSGLDAETLLKGRGVHGSFLARPSRKNQGDFSLSVRVGDQVTHIRIQNSGDFYDL 63
Query: 414 KFGFNEFSSVKDFVKHFANQP-LIGSETGTLIVLKHP 521
+G +F+++ + V+++ Q ++ GT+I LK+P
Sbjct: 64 -YGGEKFATLTELVEYYTQQQGVLQDRDGTIIHLKYP 99
>ref|XP_003359164.1| PREDICTED: tyrosine-protein phosphatase non-receptor type 11 [Sus
scrofa].
Length = 552
Score = 60.1 bits (144), Expect = 2e-09
Identities = 37/105 (35%), Positives = 53/105 (50%), Gaps = 11/105 (10%)
Frame = +3
Query: 240 WYHGNLTRHAAEALLLSNGRDGSYLLRDSNEKTGLYSLSVRAKD--------SVKHFHVE 395
W+HG+L+ AE LL G+ GS+L+R+S G + LSVR D K HV
Sbjct: 71 WFHGHLSGKEAEKLLTEKGKHGSFLVRESQSHPGDFVLSVRTGDDKGESNDGKSKVTHVM 130
Query: 396 YTGYSLKF---GFNEFSSVKDFVKHFANQPLIGSETGTLIVLKHP 521
LK+ G F S+ D V+H+ P++ GT++ LK P
Sbjct: 131 IRCQELKYDVGGGERFDSLTDLVEHYKKNPMV-ETLGTVLQLKQP 174
Database: RefSeq49_SP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 11,343,932
Number of sequences in database: 24,897
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 24897
Number of Hits to DB: 31,658,135
Number of extensions: 889578
Number of successful extensions: 3140
Number of sequences better than 1.0e-05: 43
Number of HSP's gapped: 3091
Number of HSP's successfully gapped: 45
Length of query: 401
Length of database: 11,343,932
Length adjustment: 101
Effective length of query: 300
Effective length of database: 8,829,335
Effective search space: 2648800500
Effective search space used: 2648800500
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)
Search to RefSeqMP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-013484
(1204 letters)
Database: RefSeq49_MP.fasta
30,036 sequences; 15,617,559 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_036062.1| dual adapter for phosphotyrosine and 3-phosphot... 533 e-151
Alignment gi|NP_663427.2| RAS p21 protein activator 1 [Mus musculus]. 80 4e-15
Alignment gi|NP_035008.2| non-catalytic region of tyrosine kinase adaptor... 71 2e-12
Alignment gi|NP_598703.1| pleckstrin homology domain-containing family A ... 70 3e-12
Alignment gi|NP_035009.3| non-catalytic region of tyrosine kinase adaptor... 69 7e-12
Alignment gi|NP_067255.2| 1-phosphatidylinositol-4,5-bisphosphate phospho... 67 3e-11
Alignment gi|NP_001071173.1| tyrosine-protein phosphatase non-receptor ty... 65 1e-10
Alignment gi|NP_038573.2| tyrosine-protein phosphatase non-receptor type ... 63 5e-10
Alignment gi|NP_001103462.1| tyrosine-protein phosphatase non-receptor ty... 62 7e-10
Alignment gi|NP_035332.1| tyrosine-protein phosphatase non-receptor type ... 62 7e-10
>ref|NP_036062.1| dual adapter for phosphotyrosine and 3-phosphotyrosine and
3-phosphoinositide [Mus musculus].
Length = 280
Score = 533 bits (1372), Expect = e-151
Identities = 257/280 (91%), Positives = 267/280 (95%)
Frame = +3
Query: 138 MGRAESPEGEMSTQDPLDLWSRLDGEAEPLQDLGWYHGNLTRHAAEALLLSNGRDGSYLL 317
MGRAE G MSTQDP +LW R DG + LQDLGWYHGNLTRHAAEALLLSNGRDGSYLL
Sbjct: 1 MGRAELLGGNMSTQDPSELWGRADGGTDLLQDLGWYHGNLTRHAAEALLLSNGRDGSYLL 60
Query: 318 RDSNEKTGLYSLSVRAKDSVKHFHVEYTGYSLKFGFNEFSSVKDFVKHFANQPLIGSETG 497
RDSNE+TGLYSLSVRAKDSVKHFHVEYTGYS KFGFNE+SS+KDFVKHFANQPLIGSETG
Sbjct: 61 RDSNEQTGLYSLSVRAKDSVKHFHVEYTGYSFKFGFNEYSSLKDFVKHFANQPLIGSETG 120
Query: 498 TLIVLKHPYPRKVEEPSIYESVRVHTAMQTGRTENDLVPTAPSLGTKEGYLTKQGGLVKT 677
TL+VLKHPYPR+VEEP IYESVRVHTAMQTGRTENDLVPTAPSLGTKEGYLTKQGGLVKT
Sbjct: 121 TLMVLKHPYPREVEEPCIYESVRVHTAMQTGRTENDLVPTAPSLGTKEGYLTKQGGLVKT 180
Query: 678 WKTRWFTLQRNELKYFKDQMSPEPIRILNLTECSAVQFDYSQERVNCFCLVFPFRTFYLC 857
WKTRWFTLQRNELKYFKDQMSPEPIRIL+LTECSAVQFDYSQERVNCFCLVFPFRTFYLC
Sbjct: 181 WKTRWFTLQRNELKYFKDQMSPEPIRILDLTECSAVQFDYSQERVNCFCLVFPFRTFYLC 240
Query: 858 AKTGVEADEWIKILRWKLSQIRKQLDQGDSTVRSRSFIFK 977
AKTGVEADEWIKILRWKLS+IRKQLDQG+ TVRSRSFIFK
Sbjct: 241 AKTGVEADEWIKILRWKLSKIRKQLDQGEDTVRSRSFIFK 280
>ref|NP_663427.2| RAS p21 protein activator 1 [Mus musculus].
Length = 1038
Score = 79.7 bits (195), Expect = 4e-15
Identities = 67/257 (26%), Positives = 123/257 (47%), Gaps = 19/257 (7%)
Frame = +3
Query: 189 DLWSRLDGEAEPLQDLGWYHGNLTRHAAEALLLSNGRDGSYLLRDSNEKTGLYSLSVRAK 368
DL + E +P + W+HG +++ A LL++ G+ S+L+R S+ G YSL R
Sbjct: 325 DLVEEVGREEDPHEGKIWFHGKISKQEAYNLLMTVGQVCSFLVRPSDNTPGDYSLYFRTN 384
Query: 369 DSVKHFHVEYT-GYSLKFGFNEFSSVKDFVKHFANQPLIGSETGTLIVLKHPYPRK---- 533
++++ F + T G ++S+ D + H+ + ++ LK P P +
Sbjct: 385 ENIQRFKICPTPNNQFMMGGRYYNSIGDIIDHYRKEQIVEG-----YYLKEPVPMQDQGQ 439
Query: 534 -----VEEPSIYESVRVHTAMQTGRTENDLVPTAPSLGTKEGYLTKQGGLVKTWKTRWFT 698
V+ IY ++R +T++ K+GYL K+ G K WK +F
Sbjct: 440 VLNDTVDGKEIYNTIR-------RKTKDAFYKNI----VKKGYLLKK-GKGKRWKNLYFI 487
Query: 699 LQRN--ELKYFK-DQMSPEPIRILNLTECSA-VQFDYSQERVNCFCLVFPFRT-----FY 851
L+ + +L YF+ ++ + +P +++L+ CS V D R NCF +V + FY
Sbjct: 488 LEGSDAQLIYFESEKRATKPKGLIDLSVCSVYVVHDSLFGRPNCFQIVVQHFSEEHYIFY 547
Query: 852 LCAKTGVEADEWIKILR 902
+T +A++W+K L+
Sbjct: 548 FAGETPEQAEDWMKGLQ 564
Score = 52.8 bits (125), Expect = 5e-07
Identities = 27/78 (34%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Frame = +3
Query: 240 WYHGNLTRHAAEALLLSNGRDGSYLLRDSNEKTGLYSLSVRAKDS-VKHFHVEYTGYSLK 416
WYHG L R AE L G+ GSYL+R+S+ + G + LS ++ + V HF +
Sbjct: 172 WYHGKLDRTIAEERLRQAGKSGSYLIRESDRRPGSFVLSFLSQTNVVNHFRIIAMCGDYY 231
Query: 417 FGFNEFSSVKDFVKHFAN 470
G FSS+ D + ++++
Sbjct: 232 IGGRRFSSLSDLIGYYSH 249
>ref|NP_035008.2| non-catalytic region of tyrosine kinase adaptor protein 1 [Mus
musculus].
Length = 377
Score = 70.9 bits (172), Expect = 2e-12
Identities = 34/94 (36%), Positives = 55/94 (58%), Gaps = 1/94 (1%)
Frame = +3
Query: 240 WYHGNLTRHAAEALLLSNGRDGSYLLRDSNEKTGLYSLSVRAKDSVKHFHVEYTGYSLKF 419
WY+G +TRH AE L G +G +L+RDS +S+S++A+ KHF V+
Sbjct: 282 WYYGKVTRHQAEMALNERGHEGDFLIRDSESSPNDFSVSLKAQGKNKHFKVQLKETVYCI 341
Query: 420 GFNEFSSVKDFVKHFANQPLIGSETG-TLIVLKH 518
G +FS++++ V+H+ P+ SE G L ++KH
Sbjct: 342 GQRKFSTMEELVEHYKKAPIFTSEQGEKLYLVKH 375
>ref|NP_598703.1| pleckstrin homology domain-containing family A member 1 [Mus
musculus].
Length = 356
Score = 70.5 bits (171), Expect = 3e-12
Identities = 38/97 (39%), Positives = 52/97 (53%), Gaps = 3/97 (3%)
Frame = +3
Query: 612 PTAPSLGTKEGYLTKQGGLVKTWKTRWFTLQRNELKYFKDQMSPEPIRILNLTECSAVQF 791
P + S K GY KQG ++K WK R+F L N + YFK ++ EP+R++ L E VQ
Sbjct: 138 PPSDSAVIKAGYCVKQGAVMKNWKRRYFQLDENTIGYFKSELEKEPLRVIPLKEVHKVQE 197
Query: 792 DYSQE---RVNCFCLVFPFRTFYLCAKTGVEADEWIK 893
+ R N F +V RTFY+ A + E WIK
Sbjct: 198 CKQSDIMMRDNLFEIVTTSRTFYVQADSPEEMHSWIK 234
>ref|NP_035009.3| non-catalytic region of tyrosine kinase adaptor protein 2 [Mus
musculus].
Length = 380
Score = 68.9 bits (167), Expect = 7e-12
Identities = 33/91 (36%), Positives = 49/91 (53%)
Frame = +3
Query: 240 WYHGNLTRHAAEALLLSNGRDGSYLLRDSNEKTGLYSLSVRAKDSVKHFHVEYTGYSLKF 419
WY+GN+TRH AE L G +G +L+RDS +S+S++A KHF V+
Sbjct: 285 WYYGNVTRHQAECALNERGVEGDFLIRDSESSPSDFSVSLKASGRNKHFKVQLVDSVYCI 344
Query: 420 GFNEFSSVKDFVKHFANQPLIGSETGTLIVL 512
G F S+ + V+H+ P+ SE G + L
Sbjct: 345 GQRRFHSMDELVEHYKKAPIFTSEHGEKLYL 375
>ref|NP_067255.2| 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma-1
[Mus musculus].
Length = 1302
Score = 67.0 bits (162), Expect = 3e-11
Identities = 31/80 (38%), Positives = 49/80 (61%)
Frame = +3
Query: 240 WYHGNLTRHAAEALLLSNGRDGSYLLRDSNEKTGLYSLSVRAKDSVKHFHVEYTGYSLKF 419
WYH +LTR AE +L+ RDG++L+R NE Y++S RA+ +KH V+ G ++
Sbjct: 668 WYHASLTRAQAEHMLMRVPRDGAFLVRKRNEPNS-YAISFRAEGKIKHCRVQQEGQTVML 726
Query: 420 GFNEFSSVKDFVKHFANQPL 479
G +EF S+ D + ++ PL
Sbjct: 727 GNSEFDSLVDLISYYEKHPL 746
>ref|NP_001071173.1| tyrosine-protein phosphatase non-receptor type 6 isoform b [Mus
musculus].
Length = 597
Score = 65.1 bits (157), Expect = 1e-10
Identities = 36/98 (36%), Positives = 58/98 (59%), Gaps = 3/98 (3%)
Frame = +3
Query: 237 GWYHGNLTRHAAEALLLSNGRDGSYLLRDSNEKTGLYSLSVRAKDSVKHFHVEYTG--YS 410
GW+H +L+ AE LL G GS+L R S + G +SLSVR D V H ++ +G Y
Sbjct: 5 GWFHRDLSGPDAETLLKGRGVPGSFLARPSRKNQGDFSLSVRVDDQVTHIRIQNSGDFYD 64
Query: 411 LKFGFNEFSSVKDFVKHFANQP-LIGSETGTLIVLKHP 521
L +G +F+++ + V+++ Q ++ GT+I LK+P
Sbjct: 65 L-YGGEKFATLTELVEYYTQQQGILQDRDGTIIHLKYP 101
>ref|NP_038573.2| tyrosine-protein phosphatase non-receptor type 6 isoform a [Mus
musculus].
Length = 595
Score = 62.8 bits (151), Expect = 5e-10
Identities = 35/97 (36%), Positives = 57/97 (58%), Gaps = 3/97 (3%)
Frame = +3
Query: 240 WYHGNLTRHAAEALLLSNGRDGSYLLRDSNEKTGLYSLSVRAKDSVKHFHVEYTG--YSL 413
W+H +L+ AE LL G GS+L R S + G +SLSVR D V H ++ +G Y L
Sbjct: 4 WFHRDLSGPDAETLLKGRGVPGSFLARPSRKNQGDFSLSVRVDDQVTHIRIQNSGDFYDL 63
Query: 414 KFGFNEFSSVKDFVKHFANQP-LIGSETGTLIVLKHP 521
+G +F+++ + V+++ Q ++ GT+I LK+P
Sbjct: 64 -YGGEKFATLTELVEYYTQQQGILQDRDGTIIHLKYP 99
>ref|NP_001103462.1| tyrosine-protein phosphatase non-receptor type 11 isoform b [Mus
musculus].
Length = 593
Score = 62.4 bits (150), Expect = 7e-10
Identities = 34/96 (35%), Positives = 57/96 (59%), Gaps = 2/96 (2%)
Frame = +3
Query: 240 WYHGNLTRHAAEALLLSNGRDGSYLLRDSNEKTGLYSLSVRAKDSVKHFHVEYTG-YSLK 416
W+H N+T AE LLL+ G DGS+L R S G ++LSVR +V H ++ TG Y
Sbjct: 6 WFHPNITGVEAENLLLTRGVDGSFLARPSKSNPGDFTLSVRRNGAVTHIKIQNTGDYYDL 65
Query: 417 FGFNEFSSVKDFVKHF-ANQPLIGSETGTLIVLKHP 521
+G +F+++ + V+++ + + + G +I LK+P
Sbjct: 66 YGGEKFATLAELVQYYMEHHGQLKEKNGDVIELKYP 101
Score = 60.1 bits (144), Expect = 3e-09
Identities = 37/105 (35%), Positives = 53/105 (50%), Gaps = 11/105 (10%)
Frame = +3
Query: 240 WYHGNLTRHAAEALLLSNGRDGSYLLRDSNEKTGLYSLSVRAKD--------SVKHFHVE 395
W+HG+L+ AE LL G+ GS+L+R+S G + LSVR D K HV
Sbjct: 112 WFHGHLSGKEAEKLLTEKGKHGSFLVRESQSHPGDFVLSVRTGDDKGESNDGKSKVTHVM 171
Query: 396 YTGYSLKF---GFNEFSSVKDFVKHFANQPLIGSETGTLIVLKHP 521
LK+ G F S+ D V+H+ P++ GT++ LK P
Sbjct: 172 IRCQELKYDVGGGERFDSLTDLVEHYKKNPMV-ETLGTVLQLKQP 215
>ref|NP_035332.1| tyrosine-protein phosphatase non-receptor type 11 isoform a [Mus
musculus].
Length = 597
Score = 62.4 bits (150), Expect = 7e-10
Identities = 34/96 (35%), Positives = 57/96 (59%), Gaps = 2/96 (2%)
Frame = +3
Query: 240 WYHGNLTRHAAEALLLSNGRDGSYLLRDSNEKTGLYSLSVRAKDSVKHFHVEYTG-YSLK 416
W+H N+T AE LLL+ G DGS+L R S G ++LSVR +V H ++ TG Y
Sbjct: 6 WFHPNITGVEAENLLLTRGVDGSFLARPSKSNPGDFTLSVRRNGAVTHIKIQNTGDYYDL 65
Query: 417 FGFNEFSSVKDFVKHF-ANQPLIGSETGTLIVLKHP 521
+G +F+++ + V+++ + + + G +I LK+P
Sbjct: 66 YGGEKFATLAELVQYYMEHHGQLKEKNGDVIELKYP 101
Score = 60.1 bits (144), Expect = 3e-09
Identities = 37/105 (35%), Positives = 53/105 (50%), Gaps = 11/105 (10%)
Frame = +3
Query: 240 WYHGNLTRHAAEALLLSNGRDGSYLLRDSNEKTGLYSLSVRAKD--------SVKHFHVE 395
W+HG+L+ AE LL G+ GS+L+R+S G + LSVR D K HV
Sbjct: 112 WFHGHLSGKEAEKLLTEKGKHGSFLVRESQSHPGDFVLSVRTGDDKGESNDGKSKVTHVM 171
Query: 396 YTGYSLKF---GFNEFSSVKDFVKHFANQPLIGSETGTLIVLKHP 521
LK+ G F S+ D V+H+ P++ GT++ LK P
Sbjct: 172 IRCQELKYDVGGGERFDSLTDLVEHYKKNPMV-ETLGTVLQLKQP 215
Database: RefSeq49_MP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 15,617,559
Number of sequences in database: 30,036
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 30036
Number of Hits to DB: 42,787,565
Number of extensions: 1186494
Number of successful extensions: 4157
Number of sequences better than 1.0e-05: 50
Number of HSP's gapped: 4088
Number of HSP's successfully gapped: 53
Length of query: 401
Length of database: 15,617,559
Length adjustment: 104
Effective length of query: 297
Effective length of database: 12,493,815
Effective search space: 3710663055
Effective search space used: 3710663055
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to RefSeqHP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-013484
(1204 letters)
Database: RefSeq49_HP.fasta
32,964 sequences; 18,297,164 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_055210.2| dual adapter for phosphotyrosine and 3-phosphot... 540 e-153
Alignment gi|NP_002881.1| ras GTPase-activating protein 1 isoform 1 [Homo... 82 8e-16
Alignment gi|NP_072179.1| ras GTPase-activating protein 1 isoform 2 [Homo... 82 8e-16
Alignment gi|NP_001177725.1| cytoplasmic protein NCK1 isoform 2 [Homo sap... 71 2e-12
Alignment gi|NP_006144.1| cytoplasmic protein NCK1 isoform 1 [Homo sapien... 71 2e-12
Alignment gi|NP_001182537.1| pleckstrin homology domain-containing family... 70 5e-12
Alignment gi|NP_067635.2| pleckstrin homology domain-containing family A ... 70 5e-12
Alignment gi|NP_001001974.1| pleckstrin homology domain-containing family... 70 5e-12
Alignment gi|NP_003572.2| cytoplasmic protein NCK2 isoform A [Homo sapien... 68 1e-11
Alignment gi|NP_001004720.1| cytoplasmic protein NCK2 isoform A [Homo sap... 68 1e-11
>ref|NP_055210.2| dual adapter for phosphotyrosine and 3-phosphotyrosine and
3-phosphoinositide [Homo sapiens].
Length = 280
Score = 540 bits (1391), Expect = e-153
Identities = 262/280 (93%), Positives = 270/280 (96%)
Frame = +3
Query: 138 MGRAESPEGEMSTQDPLDLWSRLDGEAEPLQDLGWYHGNLTRHAAEALLLSNGRDGSYLL 317
MGRAE EG+MSTQDP DLWSR DGEAE LQDLGWYHGNLTRHAAEALLLSNG DGSYLL
Sbjct: 1 MGRAELLEGKMSTQDPSDLWSRSDGEAELLQDLGWYHGNLTRHAAEALLLSNGCDGSYLL 60
Query: 318 RDSNEKTGLYSLSVRAKDSVKHFHVEYTGYSLKFGFNEFSSVKDFVKHFANQPLIGSETG 497
RDSNE TGLYSLSVRAKDSVKHFHVEYTGYS KFGFNEFSS+KDFVKHFANQPLIGSETG
Sbjct: 61 RDSNETTGLYSLSVRAKDSVKHFHVEYTGYSFKFGFNEFSSLKDFVKHFANQPLIGSETG 120
Query: 498 TLIVLKHPYPRKVEEPSIYESVRVHTAMQTGRTENDLVPTAPSLGTKEGYLTKQGGLVKT 677
TL+VLKHPYPRKVEEPSIYESVRVHTAMQTGRTE+DLVPTAPSLGTKEGYLTKQGGLVKT
Sbjct: 121 TLMVLKHPYPRKVEEPSIYESVRVHTAMQTGRTEDDLVPTAPSLGTKEGYLTKQGGLVKT 180
Query: 678 WKTRWFTLQRNELKYFKDQMSPEPIRILNLTECSAVQFDYSQERVNCFCLVFPFRTFYLC 857
WKTRWFTL RNELKYFKDQMSPEPIRIL+LTECSAVQFDYSQERVNCFCLVFPFRTFYLC
Sbjct: 181 WKTRWFTLHRNELKYFKDQMSPEPIRILDLTECSAVQFDYSQERVNCFCLVFPFRTFYLC 240
Query: 858 AKTGVEADEWIKILRWKLSQIRKQLDQGDSTVRSRSFIFK 977
AKTGVEADEWIKILRWKLSQIRKQL+QG+ T+RSRSFIFK
Sbjct: 241 AKTGVEADEWIKILRWKLSQIRKQLNQGEGTIRSRSFIFK 280
>ref|NP_002881.1| ras GTPase-activating protein 1 isoform 1 [Homo sapiens].
Length = 1047
Score = 82.4 bits (202), Expect = 8e-16
Identities = 67/250 (26%), Positives = 123/250 (49%), Gaps = 12/250 (4%)
Frame = +3
Query: 189 DLWSRLDGEAEPLQDLGWYHGNLTRHAAEALLLSNGRDGSYLLRDSNEKTGLYSLSVRAK 368
DL + E +P + W+HG +++ A LL++ G+ S+L+R S+ G YSL R
Sbjct: 334 DLVEEVGREEDPHEGKIWFHGKISKQEAYNLLMTVGQVCSFLVRPSDNTPGDYSLYFRTN 393
Query: 369 DSVKHFHVEYT-GYSLKFGFNEFSSVKDFVKHFANQPLIGSETGTLIVLKHPYPRKVEEP 545
++++ F + T G ++S+ D + H+ + ++ LK P P + +E
Sbjct: 394 ENIQRFKICPTPNNQFMMGGRYYNSIGDIIDHYRKEQIVEG-----YYLKEPVPMQDQEQ 448
Query: 546 SIYESVRVHTAMQTGR--TENDLVPTAPSLGTKEGYLTKQGGLVKTWKTRWFTLQRN--E 713
+ ++V T R T++ K+GYL K+ G K WK +F L+ + +
Sbjct: 449 VLNDTVDGKEIYNTIRRKTKDAFYKNI----VKKGYLLKK-GKGKRWKNLYFILEGSDAQ 503
Query: 714 LKYFK-DQMSPEPIRILNLTECSA-VQFDYSQERVNCFCLVFPFRT-----FYLCAKTGV 872
L YF+ ++ + +P +++L+ CS V D R NCF +V + FY +T
Sbjct: 504 LIYFESEKRATKPKGLIDLSVCSVYVVHDSLFGRPNCFQIVVQHFSEEHYIFYFAGETPE 563
Query: 873 EADEWIKILR 902
+A++W+K L+
Sbjct: 564 QAEDWMKGLQ 573
Score = 52.4 bits (124), Expect = 8e-07
Identities = 27/78 (34%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Frame = +3
Query: 240 WYHGNLTRHAAEALLLSNGRDGSYLLRDSNEKTGLYSLSVRAK-DSVKHFHVEYTGYSLK 416
WYHG L R AE L G+ GSYL+R+S+ + G + LS ++ + V HF +
Sbjct: 181 WYHGKLDRTIAEERLRQAGKSGSYLIRESDRRPGSFVLSFLSQMNVVNHFRIIAMCGDYY 240
Query: 417 FGFNEFSSVKDFVKHFAN 470
G FSS+ D + ++++
Sbjct: 241 IGGRRFSSLSDLIGYYSH 258
>ref|NP_072179.1| ras GTPase-activating protein 1 isoform 2 [Homo sapiens].
Length = 870
Score = 82.4 bits (202), Expect = 8e-16
Identities = 67/250 (26%), Positives = 123/250 (49%), Gaps = 12/250 (4%)
Frame = +3
Query: 189 DLWSRLDGEAEPLQDLGWYHGNLTRHAAEALLLSNGRDGSYLLRDSNEKTGLYSLSVRAK 368
DL + E +P + W+HG +++ A LL++ G+ S+L+R S+ G YSL R
Sbjct: 157 DLVEEVGREEDPHEGKIWFHGKISKQEAYNLLMTVGQVCSFLVRPSDNTPGDYSLYFRTN 216
Query: 369 DSVKHFHVEYT-GYSLKFGFNEFSSVKDFVKHFANQPLIGSETGTLIVLKHPYPRKVEEP 545
++++ F + T G ++S+ D + H+ + ++ LK P P + +E
Sbjct: 217 ENIQRFKICPTPNNQFMMGGRYYNSIGDIIDHYRKEQIVEG-----YYLKEPVPMQDQEQ 271
Query: 546 SIYESVRVHTAMQTGR--TENDLVPTAPSLGTKEGYLTKQGGLVKTWKTRWFTLQRN--E 713
+ ++V T R T++ K+GYL K+ G K WK +F L+ + +
Sbjct: 272 VLNDTVDGKEIYNTIRRKTKDAFYKNI----VKKGYLLKK-GKGKRWKNLYFILEGSDAQ 326
Query: 714 LKYFK-DQMSPEPIRILNLTECSA-VQFDYSQERVNCFCLVFPFRT-----FYLCAKTGV 872
L YF+ ++ + +P +++L+ CS V D R NCF +V + FY +T
Sbjct: 327 LIYFESEKRATKPKGLIDLSVCSVYVVHDSLFGRPNCFQIVVQHFSEEHYIFYFAGETPE 386
Query: 873 EADEWIKILR 902
+A++W+K L+
Sbjct: 387 QAEDWMKGLQ 396
Score = 54.7 bits (130), Expect = 2e-07
Identities = 28/79 (35%), Positives = 44/79 (55%), Gaps = 1/79 (1%)
Frame = +3
Query: 237 GWYHGNLTRHAAEALLLSNGRDGSYLLRDSNEKTGLYSLSVRAK-DSVKHFHVEYTGYSL 413
GWYHG L R AE L G+ GSYL+R+S+ + G + LS ++ + V HF +
Sbjct: 3 GWYHGKLDRTIAEERLRQAGKSGSYLIRESDRRPGSFVLSFLSQMNVVNHFRIIAMCGDY 62
Query: 414 KFGFNEFSSVKDFVKHFAN 470
G FSS+ D + ++++
Sbjct: 63 YIGGRRFSSLSDLIGYYSH 81
>ref|NP_001177725.1| cytoplasmic protein NCK1 isoform 2 [Homo sapiens].
Length = 313
Score = 70.9 bits (172), Expect = 2e-12
Identities = 34/94 (36%), Positives = 55/94 (58%), Gaps = 1/94 (1%)
Frame = +3
Query: 240 WYHGNLTRHAAEALLLSNGRDGSYLLRDSNEKTGLYSLSVRAKDSVKHFHVEYTGYSLKF 419
WY+G +TRH AE L G +G +L+RDS +S+S++A+ KHF V+
Sbjct: 218 WYYGKVTRHQAEMALNERGHEGDFLIRDSESSPNDFSVSLKAQGKNKHFKVQLKETVYCI 277
Query: 420 GFNEFSSVKDFVKHFANQPLIGSETG-TLIVLKH 518
G +FS++++ V+H+ P+ SE G L ++KH
Sbjct: 278 GQRKFSTMEELVEHYKKAPIFTSEQGEKLYLVKH 311
>ref|NP_006144.1| cytoplasmic protein NCK1 isoform 1 [Homo sapiens].
Length = 377
Score = 70.9 bits (172), Expect = 2e-12
Identities = 34/94 (36%), Positives = 55/94 (58%), Gaps = 1/94 (1%)
Frame = +3
Query: 240 WYHGNLTRHAAEALLLSNGRDGSYLLRDSNEKTGLYSLSVRAKDSVKHFHVEYTGYSLKF 419
WY+G +TRH AE L G +G +L+RDS +S+S++A+ KHF V+
Sbjct: 282 WYYGKVTRHQAEMALNERGHEGDFLIRDSESSPNDFSVSLKAQGKNKHFKVQLKETVYCI 341
Query: 420 GFNEFSSVKDFVKHFANQPLIGSETG-TLIVLKH 518
G +FS++++ V+H+ P+ SE G L ++KH
Sbjct: 342 GQRKFSTMEELVEHYKKAPIFTSEQGEKLYLVKH 375
>ref|NP_001182537.1| pleckstrin homology domain-containing family A member 1 isoform 2
[Homo sapiens].
Length = 334
Score = 69.7 bits (169), Expect = 5e-12
Identities = 38/97 (39%), Positives = 51/97 (52%), Gaps = 3/97 (3%)
Frame = +3
Query: 612 PTAPSLGTKEGYLTKQGGLVKTWKTRWFTLQRNELKYFKDQMSPEPIRILNLTECSAVQF 791
P S K GY KQG ++K WK R+F L N + YFK ++ EP+R++ L E VQ
Sbjct: 186 PPQDSAVIKAGYCVKQGAVMKNWKRRYFQLDENTIGYFKSELEKEPLRVIPLKEVHKVQE 245
Query: 792 DYSQE---RVNCFCLVFPFRTFYLCAKTGVEADEWIK 893
+ R N F +V RTFY+ A + E WIK
Sbjct: 246 CKQSDIMMRDNLFEIVTTSRTFYVQADSPEEMHSWIK 282
>ref|NP_067635.2| pleckstrin homology domain-containing family A member 1 isoform 1
[Homo sapiens].
Length = 404
Score = 69.7 bits (169), Expect = 5e-12
Identities = 38/97 (39%), Positives = 51/97 (52%), Gaps = 3/97 (3%)
Frame = +3
Query: 612 PTAPSLGTKEGYLTKQGGLVKTWKTRWFTLQRNELKYFKDQMSPEPIRILNLTECSAVQF 791
P S K GY KQG ++K WK R+F L N + YFK ++ EP+R++ L E VQ
Sbjct: 186 PPQDSAVIKAGYCVKQGAVMKNWKRRYFQLDENTIGYFKSELEKEPLRVIPLKEVHKVQE 245
Query: 792 DYSQE---RVNCFCLVFPFRTFYLCAKTGVEADEWIK 893
+ R N F +V RTFY+ A + E WIK
Sbjct: 246 CKQSDIMMRDNLFEIVTTSRTFYVQADSPEEMHSWIK 282
>ref|NP_001001974.1| pleckstrin homology domain-containing family A member 1 isoform 1
[Homo sapiens].
Length = 404
Score = 69.7 bits (169), Expect = 5e-12
Identities = 38/97 (39%), Positives = 51/97 (52%), Gaps = 3/97 (3%)
Frame = +3
Query: 612 PTAPSLGTKEGYLTKQGGLVKTWKTRWFTLQRNELKYFKDQMSPEPIRILNLTECSAVQF 791
P S K GY KQG ++K WK R+F L N + YFK ++ EP+R++ L E VQ
Sbjct: 186 PPQDSAVIKAGYCVKQGAVMKNWKRRYFQLDENTIGYFKSELEKEPLRVIPLKEVHKVQE 245
Query: 792 DYSQE---RVNCFCLVFPFRTFYLCAKTGVEADEWIK 893
+ R N F +V RTFY+ A + E WIK
Sbjct: 246 CKQSDIMMRDNLFEIVTTSRTFYVQADSPEEMHSWIK 282
>ref|NP_003572.2| cytoplasmic protein NCK2 isoform A [Homo sapiens].
Length = 380
Score = 68.2 bits (165), Expect = 1e-11
Identities = 32/91 (35%), Positives = 49/91 (53%)
Frame = +3
Query: 240 WYHGNLTRHAAEALLLSNGRDGSYLLRDSNEKTGLYSLSVRAKDSVKHFHVEYTGYSLKF 419
WY+GN+TRH AE L G +G +L+RDS +S+S++A KHF V+
Sbjct: 285 WYYGNVTRHQAECALNERGVEGDFLIRDSESSPSDFSVSLKASGKNKHFKVQLVDNVYCI 344
Query: 420 GFNEFSSVKDFVKHFANQPLIGSETGTLIVL 512
G F ++ + V+H+ P+ SE G + L
Sbjct: 345 GQRRFHTMDELVEHYKKAPIFTSEHGEKLYL 375
>ref|NP_001004720.1| cytoplasmic protein NCK2 isoform A [Homo sapiens].
Length = 380
Score = 68.2 bits (165), Expect = 1e-11
Identities = 32/91 (35%), Positives = 49/91 (53%)
Frame = +3
Query: 240 WYHGNLTRHAAEALLLSNGRDGSYLLRDSNEKTGLYSLSVRAKDSVKHFHVEYTGYSLKF 419
WY+GN+TRH AE L G +G +L+RDS +S+S++A KHF V+
Sbjct: 285 WYYGNVTRHQAECALNERGVEGDFLIRDSESSPSDFSVSLKASGKNKHFKVQLVDNVYCI 344
Query: 420 GFNEFSSVKDFVKHFANQPLIGSETGTLIVL 512
G F ++ + V+H+ P+ SE G + L
Sbjct: 345 GQRRFHTMDELVEHYKKAPIFTSEHGEKLYL 375
Database: RefSeq49_HP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,297,164
Number of sequences in database: 32,964
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 32964
Number of Hits to DB: 50,383,372
Number of extensions: 1404982
Number of successful extensions: 4951
Number of sequences better than 1.0e-05: 77
Number of HSP's gapped: 4860
Number of HSP's successfully gapped: 80
Length of query: 401
Length of database: 18,297,164
Length adjustment: 105
Effective length of query: 296
Effective length of database: 14,835,944
Effective search space: 4391439424
Effective search space used: 4391439424
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to Sscrofa10_2
BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-013484
(1204 letters)
Database: Sscrofa_10.2.fasta
4582 sequences; 2,808,509,378 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Sscrofa_Chr08 539 e-150
gb|JH118721.1| Sus scrofa unplaced genomic scaffold ChrUScaf2036 444 e-122
>Sscrofa_Chr08
|| Length = 148491826
Score = 539 bits (272), Expect = e-150
Identities = 292/296 (98%), Gaps = 2/296 (0%)
Strand = Plus / Minus
Query: 911 gtctcaaataagaaaacagcttgaccaaggggacagcacagtccgatctcggtcgttcat 970
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 129826201 gtctcaaataagaaaacagcttgaccaaggggacagcacagtccgatctcggtcgttcat 129826142
Query: 971 ctttaaatagaccttctccaggagggatgacctgacccaggagcaaggtggaacgttccc 1030
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 129826141 ctttaaatagaccttctccaggagggatgacctgacccaggagcaaggtggaacgttccc 129826082
Query: 1031 aatgccgatgcaccgcaggcttcagatgaaagctgactgaggacttttctgtagaaacaa 1090
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 129826081 aatgccgatgcaccgcaggcttcagatgaaagctgactgaggacttttctgtagaaacaa 129826022
Query: 1091 atcaagcagaggcagatttggttctttctggacacaccattttggtgactcacagaaaac 1150
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 129826021 atcaagcagaggcagatttggtcctttctggacacaccattttggtgactcacagaaaac 129825962
Query: 1151 tgctgcccttcacgatccc-ccatctcctgag-atactgagcatcttccttctgat 1204
||||||||||||||||||| |||||||||||| ||||||||||||||| |||||||
Sbjct: 129825961 tgctgcccttcacgatcccaccatctcctgagaatactgagcatcttcgttctgat 129825906
Score = 452 bits (228), Expect = e-124
Identities = 237/240 (98%)
Strand = Plus / Plus
Query: 1 agtttcacttccttgctggctggaggctcacagccgcggcttctccctcccggcagaggg 60
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 129881606 agtttcacttccttgctggctggaggctcagagccgcggcttctccctcccggcagaggg 129881665
Query: 61 gagcgtgcctagagctgccgagccctctccctcttaacccagcacctggaggggcttagc 120
|||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 129881666 gagcgtgcctggagccgccgagccctctccctcttaacccagcacctggaggggcttagc 129881725
Query: 121 ggacgcgaggggtgcgaatgggcagggccgaatctccagaaggggagatgagcacccagg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 129881726 ggacgcgaggggtgcgaatgggcagggccgaatctccagaaggggagatgagcacccagg 129881785
Query: 181 accctttggatctgtggagcaggttggatggagaagctgagccgctccaggacttggggt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 129881786 accctttggatctgtggagcaggttggatggagaagctgagccgctccaggacttggggt 129881845
Score = 272 bits (137), Expect = 4e-70
Identities = 137/137 (100%)
Strand = Plus / Minus
Query: 360 agagccaaagactctgtcaaacactttcatgttgaatatactggctattcacttaaattt 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 129850824 agagccaaagactctgtcaaacactttcatgttgaatatactggctattcacttaaattt 129850765
Query: 420 ggttttaatgaattctcatctgtgaaggattttgtcaagcattttgcaaatcagcctctg 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 129850764 ggttttaatgaattctcatctgtgaaggattttgtcaagcattttgcaaatcagcctctg 129850705
Query: 480 attggaagtgagacagg 496
|||||||||||||||||
Sbjct: 129850704 attggaagtgagacagg 129850688
Score = 250 bits (126), Expect = 2e-63
Identities = 132/134 (98%)
Strand = Plus / Minus
Query: 493 caggcactctcattgttctgaagcatccctacccaagaaaagtggaagaaccttccattt 552
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 129838307 caggcactctcattgttctgaagcatccctactcaagaaaagtggaagaaccttccattt 129838248
Query: 553 atgagtccgtccgagttcacacagcaatgcagacaggaagaacagagaatgacctggtgc 612
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 129838247 atgagtccgtccgagttcacacagcaatgcagacaggaagaacagagaacgacctggtgc 129838188
Query: 613 ccactgcaccttct 626
||||||||||||||
Sbjct: 129838187 ccactgcaccttct 129838174
Score = 246 bits (124), Expect = 2e-62
Identities = 124/124 (100%)
Strand = Plus / Plus
Query: 238 ggtggtaccacggcaacctcacccgacacgcagccgaggcccttctcctctccaacggac 297
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 129908658 ggtggtaccacggcaacctcacccgacacgcagccgaggcccttctcctctccaacggac 129908717
Query: 298 gtgacgggagctaccttctgcgggacagcaatgaaaagaccgggctgtactctctctctg 357
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 129908718 gtgacgggagctaccttctgcgggacagcaatgaaaagaccgggctgtactctctctctg 129908777
Query: 358 tgag 361
||||
Sbjct: 129908778 tgag 129908781
Score = 176 bits (89), Expect = 2e-41
Identities = 89/89 (100%)
Strand = Plus / Minus
Query: 823 gcctagtgtttccattcaggacattttatctctgtgcaaagacaggagtagaagctgatg 882
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 129828050 gcctagtgtttccattcaggacattttatctctgtgcaaagacaggagtagaagctgatg 129827991
Query: 883 agtggatcaagatcctacgctggaagctg 911
|||||||||||||||||||||||||||||
Sbjct: 129827990 agtggatcaagatcctacgctggaagctg 129827962
Score = 172 bits (87), Expect = 3e-40
Identities = 87/87 (100%)
Strand = Plus / Minus
Query: 737 gtcaccagaaccaattcggatcctaaacttaacagaatgttcagctgtacaatttgatta 796
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 129831254 gtcaccagaaccaattcggatcctaaacttaacagaatgttcagctgtacaatttgatta 129831195
Query: 797 ttcacaagaaagagtaaattgcttttg 823
|||||||||||||||||||||||||||
Sbjct: 129831194 ttcacaagaaagagtaaattgcttttg 129831168
Score = 129 bits (65), Expect = 4e-27
Identities = 65/65 (100%)
Strand = Plus / Minus
Query: 673 agacctggaaaacaagatggttcactttgcagaggaatgaactgaaatacttcaaagacc 732
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 129832726 agacctggaaaacaagatggttcactttgcagaggaatgaactgaaatacttcaaagacc 129832667
Query: 733 agatg 737
|||||
Sbjct: 129832666 agatg 129832662
Score = 95.6 bits (48), Expect = 5e-17
Identities = 48/48 (100%)
Strand = Plus / Minus
Query: 627 ctgggcaccaaggaaggttacctcaccaaacaggggggcctggtcaag 674
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 129834687 ctgggcaccaaggaaggttacctcaccaaacaggggggcctggtcaag 129834640
>gb|JH118721.1| Sus scrofa unplaced genomic scaffold ChrUScaf2036
Length = 189091
Score = 444 bits (224), Expect = e-122
Identities = 236/240 (98%)
Strand = Plus / Minus
Query: 1 agtttcacttccttgctggctggaggctcacagccgcggcttctccctcccggcagaggg 60
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 17186 agtttcacttccttgctggctggaggctcagagccgcggcttctccctcccggcagaggg 17127
Query: 61 gagcgtgcctagagctgccgagccctctccctcttaacccagcacctggaggggcttagc 120
|||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17126 gagcgtgcctggagccgccgagccctctccctcttaacccagcacctggaggggcttagc 17067
Query: 121 ggacgcgaggggtgcgaatgggcagggccgaatctccagaaggggagatgagcacccagg 180
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 17066 ggacgcgaggggtgcgaatgggcagggacgaatctccagaaggggagatgagcacccagg 17007
Query: 181 accctttggatctgtggagcaggttggatggagaagctgagccgctccaggacttggggt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17006 accctttggatctgtggagcaggttggatggagaagctgagccgctccaggacttggggt 16947
Database: Sscrofa_10.2.fasta
Posted date: Nov 16, 2011 10:34 AM
Number of letters in database: 2,808,509,378
Number of sequences in database: 4582
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4582
Number of Hits to DB: 39,536,943
Number of extensions: 254
Number of successful extensions: 254
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 253
Number of HSP's successfully gapped: 10
Length of query: 1204
Length of database: 2,808,509,378
Length adjustment: 21
Effective length of query: 1183
Effective length of database: 2,808,413,156
Effective search space: 3322352763548
Effective search space used: 3322352763548
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 18 (36.2 bits)
S2: 30 (60.0 bits)