BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-013490
(934 letters)
Database: RefSeq49_CP.fasta
33,336 sequences; 18,874,504 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_849906.1| PREDICTED: similar to Serine/threonine-protein ... 550 e-157
Alignment gi|XP_536631.2| PREDICTED: similar to Serine/threonine-protein ... 548 e-156
Alignment gi|XP_860159.1| PREDICTED: similar to Serine/threonine-protein ... 548 e-156
Alignment gi|XP_860048.1| PREDICTED: similar to Serine/threonine-protein ... 490 e-139
Alignment gi|XP_543064.2| PREDICTED: similar to Serine/threonine-protein ... 358 3e-99
Alignment gi|XP_853397.1| PREDICTED: similar to Serine/threonine-protein ... 358 3e-99
Alignment gi|XP_867311.1| PREDICTED: similar to Serine/threonine-protein ... 354 6e-98
Alignment gi|XP_860084.1| PREDICTED: similar to Serine/threonine-protein ... 223 3e-58
Alignment gi|XP_856476.1| PREDICTED: similar to Serine/threonine-protein ... 157 1e-38
Alignment gi|XP_533295.2| PREDICTED: similar to Serine/threonine-protein ... 157 1e-38
>ref|XP_849906.1| PREDICTED: similar to Serine/threonine-protein kinase 12 (Aurora-
and Ipl1-like midbody-associated protein 1) (AIM-1)
(Aurora/IPL1-related kinase 2) (Aurora-related kinase 2)
(STK-1) (Aurora-B) isoform 2 [Canis familiaris].
Length = 346
Score = 550 bits (1417), Expect = e-157
Identities = 271/288 (94%), Positives = 273/288 (94%), Gaps = 2/288 (0%)
Frame = +1
Query: 76 MAQKENTYPWPYGRQTAQSGLNILPQRVLRKEAVTPSALVLMSRSNTQPTAAPGQKVVEN 255
M QKEN YPWPYGRQT Q GLN LPQRVLRK+ TPSALVLMSRSN QPTAAPGQKVVEN
Sbjct: 1 MTQKENAYPWPYGRQTTQPGLNTLPQRVLRKDPATPSALVLMSRSNGQPTAAPGQKVVEN 60
Query: 256 SSGTPNFSTRSFTIDDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEH 435
SSG PNFS RSFTIDDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEH
Sbjct: 61 SSGIPNFSMRSFTIDDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEH 120
Query: 436 QLRREIEIQAHLQHPNILRLYNYFYDRRRIYLILEYAPRGELYKELQKCRTFDEQRTATI 615
QLRREIEIQAHLQHPNILRLYNYFYDRRRIYLILEYAPRGELYKELQK TFDEQRTATI
Sbjct: 121 QLRREIEIQAHLQHPNILRLYNYFYDRRRIYLILEYAPRGELYKELQKSHTFDEQRTATI 180
Query: 616 MEELADALIYCHGKKVIHRDIKPENLLLGLQGELKIADFGWSVHAPSL--RRKTMCGTLD 789
MEELADAL+YCHGKKVIHRDIKPENLLLGLQGELKIADFGWSVHAPSL RRKTMCGTLD
Sbjct: 181 MEELADALMYCHGKKVIHRDIKPENLLLGLQGELKIADFGWSVHAPSLRGRRKTMCGTLD 240
Que
Animal-Genome cDNA 20110601C-013490
Animal-Genome cDNA 20110601C-013490
Search to RefSeqBP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-013490
(934 letters)
Database: RefSeq49_BP.fasta
33,088 sequences; 17,681,374 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_898907.2| serine/threonine-protein kinase 12 [Bos taurus]. 559 e-159
Alignment gi|NP_001180124.1| serine/threonine-protein kinase 13 [Bos taur... 402 e-112
Alignment gi|XP_002695487.1| PREDICTED: aurora kinase C-like [Bos taurus]. 402 e-112
Alignment gi|NP_001033117.1| serine/threonine-protein kinase 6 [Bos tauru... 358 4e-99
Alignment gi|NP_001076896.1| serine/threonine-protein kinase PLK4 [Bos ta... 157 1e-38
Alignment gi|NP_001192425.1| NUAK family SNF1-like kinase 1 [Bos taurus]. 154 8e-38
Alignment gi|XP_002687703.1| PREDICTED: NUAK family, SNF1-like kinase, 1 ... 154 8e-38
Alignment gi|XP_002697908.1| PREDICTED: 3-phosphoinositide-dependent prot... 152 4e-37
Alignment gi|NP_001095503.1| serine/threonine-protein kinase Sgk1 [Bos ta... 150 1e-36
Alignment gi|NP_001070331.1| protein kinase C eta type [Bos taurus]. 148 6e-36
>ref|NP_898907.2| serine/threonine-protein kinase 12 [Bos taurus].
Length = 344
Score = 559 bits (1441), Expect = e-159
Identities = 274/286 (95%), Positives = 275/286 (96%)
Frame = +1
Query: 76 MAQKENTYPWPYGRQTAQSGLNILPQRVLRKEAVTPSALVLMSRSNTQPTAAPGQKVVEN 255
MAQKEN YPWPYGRQTAQ GLN LPQRVLRKE VTPSALVLMSRSN QPTAAPGQKVVEN
Sbjct: 1 MAQKENAYPWPYGRQTAQPGLNTLPQRVLRKEPVTPSALVLMSRSNAQPTAAPGQKVVEN 60
Query: 256 SSGTPNFSTRSFTIDDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEH 435
SSGTPN RSFTIDDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEH
Sbjct: 61 SSGTPNIPKRSFTIDDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEH 120
Query: 436 QLRREIEIQAHLQHPNILRLYNYFYDRRRIYLILEYAPRGELYKELQKCRTFDEQRTATI 615
QLRREIEIQAHLQHPNILRLYNYFYDRRRIYLILEYAPRGELYKELQK RTFDEQRTATI
Sbjct: 121 QLRREIEIQAHLQHPNILRLYNYFYDRRRIYLILEYAPRGELYKELQKSRTFDEQRTATI 180
Query: 616 MEELADALIYCHGKKVIHRDIKPENLLLGLQGELKIADFGWSVHAPSLRRKTMCGTLDYL 795
MEELADAL YCH KKVIHRDIKPENLLLGL+GELKIADFGWSVHAPSLRRKTMCGTLDYL
Sbjct: 181 MEELADALTYCHAKKVIHRDIKPENLLLGLRGELKIADFGWSVHAPSLRRKTMCGTLDYL 240
Query: 796 PPEMIEGRTHNEKVDLWCIGVLCYELLVGNPPFESASHNETYRRIV 933
PPEMIEGRTHNEKVDLWCIGVLCYELLVGNPPFESASHNETYRRIV
Sbjct: 241 PPEMIEGRTHNEKVDLWCIGVLCYELLVGNPPFESASHNETYRRIV 286
>ref|XP_536631.2| PREDICTED: similar to Serine/threonine-protein kinase 12 (Aurora-
and Ipl1-like midbody-associated protein 1) (AIM-1)
(Aurora/IPL1-related kinase 2) (Aurora-related kinase 2)
(STK-1) (Aurora-B) isoform 1 [Canis familiaris].
Length = 343
Score = 548 bits (1413), Expect = e-156
Identities = 270/286 (94%), Positives = 272/286 (95%)
Frame = +1
Query: 76 MAQKENTYPWPYGRQTAQSGLNILPQRVLRKEAVTPSALVLMSRSNTQPTAAPGQKVVEN 255
M QKEN YPWPYGRQT Q GLN LPQRVLRK+ TPSALVLMSRSN QPTAAPGQKVVEN
Sbjct: 1 MTQKENAYPWPYGRQTTQPGLNTLPQRVLRKDPATPSALVLMSRSNGQPTAAPGQKVVEN 60
Query: 256 SSGTPNFSTRSFTIDDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEH 435
SSG PNFS RSFTIDDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEH
Sbjct: 61 SSGIPNFSMRSFTIDDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEH 120
Query: 436 QLRREIEIQAHLQHPNILRLYNYFYDRRRIYLILEYAPRGELYKELQKCRTFDEQRTATI 615
QLRREIEIQAHLQHPNILRLYNYFYDRRRIYLILEYAPRGELYKELQK TFDEQRTATI
Sbjct: 121 QLRREIEIQAHLQHPNILRLYNYFYDRRRIYLILEYAPRGELYKELQKSHTFDEQRTATI 180
Query: 616 MEELADALIYCHGKKVIHRDIKPENLLLGLQGELKIADFGWSVHAPSLRRKTMCGTLDYL 795
MEELADAL+YCHGKKVIHRDIKPENLLLGLQGELKIADFGWSVHAPSL RKTMCGTLDYL
Sbjct: 181 MEELADALMYCHGKKVIHRDIKPENLLLGLQGELKIADFGWSVHAPSL-RKTMCGTLDYL 239
Query: 796 PPEMIEGRTHNEKVDLWCIGVLCYELLVGNPPFESASHNETYRRIV 933
PPEMIEGR HNEKVDLWCIGVLCYELLVGNPPFESASHNETYRRIV
Sbjct: 240 PPEMIEGRMHNEKVDLWCIGVLCYELLVGNPPFESASHNETYRRIV 285
>ref|XP_860159.1| PREDICTED: similar to Serine/threonine-protein kinase 12 (Aurora-
and Ipl1-like midbody-associated protein 1) (AIM-1)
(Aurora/IPL1-related kinase 2) (Aurora-related kinase 2)
(STK-1) (Aurora-B) isoform 5 [Canis familiaris].
Length = 351
Score = 548 bits (1412), Expect = e-156
Identities = 271/293 (92%), Positives = 273/293 (93%), Gaps = 7/293 (2%)
Frame = +1
Query: 76 MAQKENTYPWPYGRQTAQSGLNILPQRVLRKEAVTPSALVLMSRSNTQPTAAPGQKVVEN 255
M QKEN YPWPYGRQT Q GLN LPQRVLRK+ TPSALVLMSRSN QPTAAPGQKVVEN
Sbjct: 1 MTQKENAYPWPYGRQTTQPGLNTLPQRVLRKDPATPSALVLMSRSNGQPTAAPGQKVVEN 60
Query: 256 SSGTPNFSTRSFTIDDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEH 435
SSG PNFS RSFTIDDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEH
Sbjct: 61 SSGIPNFSMRSFTIDDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEH 120
Query: 436 QLRREIEIQAHLQHPNILRLYNYFYDRRRIYLILEYAPRGELYKELQKCRTFDEQRTATI 615
QLRREIEIQAHLQHPNILRLYNYFYDRRRIYLILEYAPRGELYKELQK TFDEQRTATI
Sbjct: 121 QLRREIEIQAHLQHPNILRLYNYFYDRRRIYLILEYAPRGELYKELQKSHTFDEQRTATI 180
Query: 616 MEELADALIYCHGKKVIHRDIKPENLLLGLQGELKIADFGWSVHAPSL-------RRKTM 774
MEELADAL+YCHGKKVIHRDIKPENLLLGLQGELKIADFGWSVHAPSL RRKTM
Sbjct: 181 MEELADALMYCHGKKVIHRDIKPENLLLGLQGELKIADFGWSVHAPSLRSPTLPPRRKTM 240
Query: 775 CGTLDYLPPEMIEGRTHNEKVDLWCIGVLCYELLVGNPPFESASHNETYRRIV 933
CGTLDYLPPEMIEGR HNEKVDLWCIGVLCYELLVGNPPFESASHNETYRRIV
Sbjct: 241 CGTLDYLPPEMIEGRMHNEKVDLWCIGVLCYELLVGNPPFESASHNETYRRIV 293
>ref|XP_860048.1| PREDICTED: similar to Serine/threonine-protein kinase 12 (Aurora-
and Ipl1-like midbody-associated protein 1) (AIM-1)
(Aurora/IPL1-related kinase 2) (Aurora-related kinase 2)
(STK-1) (Aurora-B) isoform 3 [Canis familiaris].
Length = 310
Score = 490 bits (1261), Expect = e-139
Identities = 241/256 (94%), Positives = 243/256 (94%)
Frame = +1
Query: 76 MAQKENTYPWPYGRQTAQSGLNILPQRVLRKEAVTPSALVLMSRSNTQPTAAPGQKVVEN 255
M QKEN YPWPYGRQT Q GLN LPQRVLRK+ TPSALVLMSRSN QPTAAPGQKVVEN
Sbjct: 1 MTQKENAYPWPYGRQTTQPGLNTLPQRVLRKDPATPSALVLMSRSNGQPTAAPl49_1>>ref|NP_001180124.1| serine/threonine-protein kinase 13 [Bos taurus].
Length = 304
Score = 402 bits (1034), Expect = e-112
Identities = 197/236 (83%), Positives = 214/236 (90%)
Frame = +1
Query: 226 AAPGQKVVENSSGTPNFSTRSFTIDDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFK 405
AA GQ V G P + R FT+DDFEIGRPLGKGKFGNVYLAR KK+HFIVALKVLFK
Sbjct: 18 AAAGQTV----PGAP--TARRFTVDDFEIGRPLGKGKFGNVYLARLKKNHFIVALKVLFK 71
Query: 406 SQIEKEGVEHQLRREIEIQAHLQHPNILRLYNYFYDRRRIYLILEYAPRGELYKELQKCR 585
SQIEKEG+EHQLRRE+EIQAHLQHPNILRLYNYF+D RR+YLILEYAP+GELYK LQ+
Sbjct: 72 SQIEKEGLEHQLRREVEIQAHLQHPNILRLYNYFHDARRVYLILEYAPKGELYKALQRSH 131
Query: 586 TFDEQRTATIMEELADALIYCHGKKVIHRDIKPENLLLGLQGELKIADFGWSVHAPSLRR 765
TFDEQRTATI+EELADALIYCH +KVIHRDIKPENLLLGL GE+KIADFGWSVH PSLRR
Sbjct: 132 TFDEQRTATIIEELADALIYCHERKVIHRDIKPENLLLGLMGEVKIADFGWSVHTPSLRR 191
Query: 766 KTMCGTLDYLPPEMIEGRTHNEKVDLWCIGVLCYELLVGNPPFESASHNETYRRIV 933
+T CGTLDYLPPEMIEGRT++EKVDLWCIGVLCYELLVGNPPFESAS +ETYRRI+
Sbjct: 192 RTTCGTLDYLPPEMIEGRTYDEKVDLWCIGVLCYELLVGNPPFESASTSETYRRIL 247
>ref|XP_002695487.1| PREDICTED: aurora kinase C-like [Bos taurus].
Length = 304
Score = 402 bits (1034), Expect = e-112
Identities = 197/236 (83%), Positives = 214/236 (90%)
Frame = +1
Query: 226 AAPGQKVVENSSGTPNFSTRSFTIDDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFK 405
AA GQ V G P + R FT+DDFEIGRPLGKGKFGNVYLAR KK+HFIVALKVLFK
Sbjct: 18 AAAGQTV----PGAP--TARRFTVDDFEIGRPLGKGKFGNVYLARLKKNHFIVALKVLFK 71
Query: 406 SQIEKEGVEHQLRREIEIQAHLQHPNILRLYNYFYDRRRIYLILEYAPRGELYKELQKCR 585
SQIEKEG+EHQLRRE+EIQAHLQHPNILRLYNYF+D RR+YLILEYAP+GELYK LQ+
Sbjct: 72 SQIEKEGLEHQLRREVEIQAHLQHPNILRLYNYFHDARRVYLILEYAPKGELYKALQRSH 131
Query: 586 TFDEQRTATIMEELADALIYCHGKKVIHRDIKPENLLLGLQGELKIADFGWSVHAPSLRR 765
TFDEQRTATI+EELADALIYCH +KVIHRDIKPENLLLGL GE+KIADFGWSVH PSLRR
Sbjct: 132 TFDEQRTATIIEELADALIYCHERKVIHRDIKPENLLLGLMGEVKIADFGWSVHTPSLRR 191
Query: 766 KTMCGTLDYLPPEMIEGRTHNEKVDLWCIGVLCYELLVGNPPFESASHNETYRRIV 933
+T CGTLDYLPPEMIEGRT++EKVDLWCIGVLCYELLVGNPPFESAS +ETYRRI+
Sbjct: 192 RTTCGTLDYLPPEMIEGRTYDEKVDLWCIGVLCYELLVGNPPFESASTSETYRRIL 247
>ref|NP_001033117.1| serine/threonine-protein kinase 6 [Bos taurus].
Length = 402
Score = 358 bits (919), Expect = 4e-99
Identities = 176/249 (70%), Positives = 202/249 (81%), Gaps = 8/249 (3%)
Frame = +1
Query: 208 SNTQPTA-----APG---QKVVENSSGTPNFSTRSFTIDDFEIGRPLGKGKFGNVYLARE 363
SNTQ + APG +K V + R + ++DFEIGRPLGKGKFGNVYLARE
Sbjct: 93 SNTQKSKQPQPPAPGNNPEKEVASKQKNEESKKRQWALEDFEIGRPLGKGKFGNVYLARE 152
Query: 364 KKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLQHPNILRLYNYFYDRRRIYLILEY 543
K+S FI+ALKVLFK+Q+EK GVEHQLRRE+EIQ+HL+HPNILRLY YF+D R+YLILEY
Sbjct: 153 KQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEY 212
Query: 544 APRGELYKELQKCRTFDEQRTATIMEELADALIYCHGKKVIHRDIKPENLLLGLQGELKI 723
AP G +Y+ELQK FDEQRTAT + ELA+AL YCH K+VIHRDIKPENLLLG GELKI
Sbjct: 213 APLGAVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKI 272
Query: 724 ADFGWSVHAPSLRRKTMCGTLDYLPPEMIEGRTHNEKVDLWCIGVLCYELLVGNPPFESA 903
ADFGWSVHAPS RR T+CGTLDYLPPEMIEGR H+EKVDLW +GVLCYE LVG PPFE+
Sbjct: 273 ADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAD 332
Query: 904 SHNETYRRI 930
++ ETYRRI
Sbjct: 333 TYQETYRRI 341
>ref|NP_001076896.1| serine/threonine-protein kinase PLK4 [Bos taurus].
Length = 893
Score = 157 bits (397), Expect = 1e-38
Identities = 78/216 (36%), Positives = 123/216 (56%), Gaps = 3/216 (1%)
Frame = +1
Query: 295 IDDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLQ 474
I+DF +G LGKG F VY A + VA+K++ K + K G+ +++ E++I L+
SbjctGQKVVEN 60
Query: 256 SSGTPNFSTRSFTIDDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEH 435
SSG PNFS RSFTIDDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEH
Sbjct: 61 SSGIPNFSMRSFTIDDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEH 120
Query: 436 QLRREIEIQAHLQHPNILRLYNYFYDRRRIYLILEYAPRGELYKELQKCRTFDEQRTATI 615
QLRREIEIQAHLQHPNILRLYNYFYDRRRIYLILEYAPRGELYKELQK TFDEQRTATI
Sbjct: 121 QLRREIEIQAHLQHPNILRLYNYFYDRRRIYLILEYAPRGELYKELQKSHTFDEQRTATI 180
Query: 616 MEELADALIYCHGKKVIHRDIKPENLLLGLQGELKIADFGWSVHAPSLRRKTMCGTLDYL 795
MEELADAL+YCHGKKVIHRDIKPENLLLGLQGELKIADFGWSVHAPSLRRKTMCGTLDYL
Sbjct: 181 MEELADALMYCHGKKVIHRDIKPENLLLGLQGELKIADFGWSVHAPSLRRKTMCGTLDYL 240
Query: 796 PPEMIEGRTHNEKVDL 843
PPEMIEGR HNEKVDL
Sbjct: 241 PPEMIEGRMHNEKVDL 256
>ref|XP_543064.2| PREDICTED: similar to Serine/threonine-protein kinase 6
(Serine/threonine kinase 15) (Aurora/IPL1-related kinase
1) (Aurora-related kinase 1) (hARK1) (Aurora-A)
(Breast-tumor-amplified kinase) isoform 1 [Canis
familiaris].
Length = 415
Score = 358 bits (920), Expect = 3e-99
Identities = 171/245 (69%), Positives = 201/245 (82%), Gaps = 3/245 (1%)
Frame = +1
Query: 205 RSNTQPTAAPG---QKVVENSSGTPNFSTRSFTIDDFEIGRPLGKGKFGNVYLAREKKSH 375
+S ++APG +K + R + ++DFEIGRPLGKGKFGNVYLAREK+S
Sbjct: 108 KSEQPSSSAPGNNSEKELATKQKNEESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSK 167
Query: 376 FIVALKVLFKSQIEKEGVEHQLRREIEIQAHLQHPNILRLYNYFYDRRRIYLILEYAPRG 555
FI+A+KVLFK+Q+EK GVEHQLRRE+EIQ+HL+HPNILRLY YF+D R+YLILEYAP G
Sbjct: 168 FILAIKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLG 227
Query: 556 ELYKELQKCRTFDEQRTATIMEELADALIYCHGKKVIHRDIKPENLLLGLQGELKIADFG 735
+Y+ELQK FDEQRTAT + ELADAL YCH K+VIHRDIKPENLLLG GELKIADFG
Sbjct: 228 AVYRELQKLSKFDEQRTATYITELADALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG 287
Query: 736 WSVHAPSLRRKTMCGTLDYLPPEMIEGRTHNEKVDLWCIGVLCYELLVGNPPFESASHNE 915
WSVHAPS RR T+CGTLDYLPPEMIEGR H+EKVDLW +GVLCYE LVG PPFE++++ E
Sbjct: 288 WSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEASTYQE 347
Query: 916 TYRRI 930
TY+RI
Sbjct: 348 TYKRI 352
>ref|XP_853397.1| PREDICTED: similar to Serine/threonine-protein kinase 6
(Serine/threonine kinase 15) (Aurora/IPL1-related kinase
1) (Aurora-related kinase 1) (hARK1) (Aurora-A)
(Breast-tumor-amplified kinase) isoform 2 [Canis
familiaris].
Length = 405
Score = 358 bits (920), Expect = 3e-99
Identities = 171/245 (69%), Positives = 201/245 (82%), Gaps = 3/245 (1%)
Frame = +1
Query: 205 RSNTQPTAAPG---QKVVENSSGTPNFSTRSFTIDDFEIGRPLGKGKFGNVYLAREKKSH 375
+S ++APG +K + R + ++DFEIGRPLGKGKFGNVYLAREK+S
Sbjct: 98 KSEQPSSSAPGNNSEKELATKQKNEESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSK 157
Query: 376 FIVALKVLFKSQIEKEGVEHQLRREIEIQAHLQHPNILRLYNYFYDRRRIYLILEYAPRG 555
FI+A+KVLFK+Q+EK GVEHQLRRE+EIQ+HL+HPNILRLY YF+D R+YLILEYAP G
Sbjct: 158 FILAIKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLG 217
Query: 556 ELYKELQKCRTFDEQRTATIMEELADALIYCHGKKVIHRDIKPENLLLGLQGELKIADFG 735
+Y+ELQK FDEQRTAT + ELADAL YCH K+VIHRDIKPENLLLG GELKIADFG
Sbjct: 218 AVYRELQKLSKFDEQRTATYITELADALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG 277
Query: 736 WSVHAPSLRRKTMCGTLDYLPPEMIEGRTHNEKVDLWCIGVLCYELLVGNPPFESASHNE 915
WSVHAPS RR T+CGTLDYLPPEMIEGR H+EKVDLW +GVLCYE LVG PPFE++++ E
Sbjct: 278 WSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEASTYQE 337
Query: 916 TYRRI 930
TY+RI
Sbjct: 338 TYKRI 342
>ref|XP_867311.1| PREDICTED: similar to Serine/threonine-protein kinase 6
(Serine/threonine kinase 15) (Aurora/IPL1-related kinase
1) (Aurora-related kinase 1) (hARK1) (Aurora-A)
(Breast-tumor-amplified kinase) isoform 3 [: 9 IEDFRVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLK 68
Query: 475 HPNILRLYNYFYDRRRIYLILEYAPRGELYKELQKCR-TFDEQRTATIMEELADALIYCH 651
HP+IL LYNYF D +YL+LE GE+ + L+ R F E M ++ ++Y H
Sbjct: 69 HPSILELYNYFEDNNYVYLVLEMCHNGEMNRYLKNRRKPFSENEARHFMHQIITGMLYLH 128
Query: 652 GKKVIHRDIKPENLLLGLQGELKIADFGWS--VHAPSLRRKTMCGTLDYLPPEMIEGRTH 825
++HRD+ NLLL +KIADFG + + P + T+CGT +Y+ PE+ H
Sbjct: 129 SHGILHRDLTLSNLLLTRNMNIKIADFGLAAQLKMPHEKHYTLCGTPNYISPEIATRSAH 188
Query: 826 NEKVDLWCIGVLCYELLVGNPPFESASHNETYRRIV 933
+ D+W +G + Y LL+G PPF++ + T ++V
Sbjct: 189 GLESDIWSLGCMFYTLLIGRPPFDTDTVKNTLNKVV 224
>ref|NP_001192425.1| NUAK family SNF1-like kinase 1 [Bos taurus].
Length = 662
Score = 154 bits (390), Expect = 8e-38
Identities = 82/211 (38%), Positives = 124/211 (58%), Gaps = 2/211 (0%)
Frame = +1
Query: 304 FEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLQHPN 483
+E+ LGKG +G V A E+ S +VA+K + K +I+ E +RREIEI + L HP+
Sbjct: 56 YELQETLGKGTYGKVKRATERFSGRVVAIKSIRKDKIKDEQDMVHIRREIEIMSSLNHPH 115
Query: 484 ILRLYNYFYDRRRIYLILEYAPRGELYKELQKCRTFDEQRTATIMEELADALIYCHGKKV 663
I+ +Y F ++ +I +I+EYA +GELY + + R E+ T ++ A+ YCH V
Sbjct: 116 IISIYEVFENKDKIVIIMEYASKGELYDYISERRRLSERETRHFFRQIVSAVHYCHKNGV 175
Query: 664 IHRDIKPENLLLGLQGELKIADFGWS-VHAPSLRRKTMCGTLDYLPPEMIEGRTH-NEKV 837
+HRD+K EN+LL +KIADFG S ++ +T CG+ Y PE++ GR + +V
Sbjct: 176 VHRDLKLENILLDDNCNIKIADFGLSNLYQKDKFLQTFCGSPLYASPEIVNGRPYRGPEV 235
Query: 838 DLWCIGVLCYELLVGNPPFESASHNETYRRI 930
D W +GVL Y L+ G PF+ H R+I
Sbjct: 236 DSWALGVLLYTLVYGTMPFDGFDHKNLIRQI 266
>ref|XP_002687703.1| PREDICTED: NUAK family, SNF1-like kinase, 1 [Bos taurus].
Length = 662
Score = 154 bits (390), Expect = 8e-38
Identities = 82/211 (38%), Positives = 124/211 (58%), Gaps = 2/211 (0%)
Frame = +1
Query: 304 FEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLQHPN 483
+E+ LGKG +G V A E+ S +VA+K + K +I+ E +RREIEI + L HP+
Sbjct: 56 YELQETLGKGTYGKVKRATERFSGRVVAIKSIRKDKIKDEQDMVHIRREIEIMSSLNHPH 115
Query: 484 ILRLYNYFYDRRRIYLILEYAPRGELYKELQKCRTFDEQRTATIMEELADALIYCHGKKV 663
I+ +Y F ++ +I +I+EYA +GELY + + R E+ T ++ A+ YCH V
Sbjct: 116 IISIYEVFENKDKIVIIMEYASKGELYDYISERRRLSERETRHFFRQIVSAVHYCHKNGV 175
Query: 664 IHRDIKPENLLLGLQGELKIADFGWS-VHAPSLRRKTMCGTLDYLPPEMIEGRTH-NEKV 837
+HRD+K EN+LL +KIADFG S ++ +T CG+ Y PE++ GR + +V
Sbjct: 176 VHRDLKLENILLDDNCNIKIADFGLSNLYQKDKFLQTFCGSPLYASPEIVNGRPYRGPEV 235
Query: 838 DLWCIGVLCYELLVGNPPFESASHNETYRRI 930
D W +GVL Y L+ G PF+ H R+I
Sbjct: 236 DSWALGVLLYTLVYGTMPFDGFDHKNLIRQI 266
>ref|XP_002697908.1| PREDICTED: 3-phosphoinositide-dependent protein kinase 1-like [Bos
taurus].
Length = 593
Score = 152 bits (384), Expect = 4e-37
Identities = 79/216 (36%), Positives = 122/216 (56%), Gaps = 4/216 (1%)
Frame = +1
Query: 298 DDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLQH 477
+DF+ G+ LG+G F V LARE + A+K+L K I KE + RE ++ + L H
Sbjct: 117 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 176
Query: 478 PNILRLYNYFYDRRRIYLILEYAPRGELYKELQKCRTFDEQRTATIMEELADALIYCHGK 657
P ++LY F D ++Y L YA GEL K ++K +FDE T E+ AL Y HGK
Sbjct: 177 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEMVSALEYLHGK 236
Query: 658 KVIHRDIKPENLLLGLQGELKIADFG----WSVHAPSLRRKTMCGTLDYLPPEMIEGRTH 825
++HRD+KPEN+LL ++I DFG S + R + GT Y+ PE++ ++
Sbjct: 237 GIVHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSA 296
Query: 826 NEKVDLWCIGVLCYELLVGNPPFESASHNETYRRIV 933
+ DLW +G + Y+L+ G PPF + + +++I+
Sbjct: 297 CKSSDLWALGCIIYQLVAGLPPFRAGNECanis
familiaris].
Length = 421
Score = 354 bits (909), Expect = 6e-98
Identities = 165/219 (75%), Positives = 191/219 (87%)
Frame = +1
Query: 274 FSTRSFTIDDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREI 453
+ + ++DFEIGRPLGKGKFGNVYLAREK+S FI+A+KVLFK+Q+EK GVEHQLRRE+
Sbjct: 140 YKVLQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILAIKVLFKAQLEKAGVEHQLRREV 199
Query: 454 EIQAHLQHPNILRLYNYFYDRRRIYLILEYAPRGELYKELQKCRTFDEQRTATIMEELAD 633
EIQ+HL+HPNILRLY YF+D R+YLILEYAP G +Y+ELQK FDEQRTAT + ELAD
Sbjct: 200 EIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGAVYRELQKLSKFDEQRTATYITELAD 259
Query: 634 ALIYCHGKKVIHRDIKPENLLLGLQGELKIADFGWSVHAPSLRRKTMCGTLDYLPPEMIE 813
AL YCH K+VIHRDIKPENLLLG GELKIADFGWSVHAPS RR T+CGTLDYLPPEMIE
Sbjct: 260 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIE 319
Query: 814 GRTHNEKVDLWCIGVLCYELLVGNPPFESASHNETYRRI 930
GR H+EKVDLW +GVLCYE LVG PPFE++++ ETY+RI
Sbjct: 320 GRMHDEKVDLWSLGVLCYEFLVGKPPFEASTYQETYKRI 358
>ref|XP_860084.1| PREDICTED: similar to Serine/threonine-protein kinase 12 (Aurora-
and Ipl1-like midbody-associated protein 1) (AIM-1)
(Aurora/IPL1-related kinase 2) (Aurora-related kinase 2)
(STK-1) (Aurora-B) isoform 4 [Canis familiaris].
Length = 164
Score = 223 bits (567), Expect = 3e-58
Identities = 104/106 (98%), Positives = 105/106 (99%)
Frame = +1
Query: 616 MEELADALIYCHGKKVIHRDIKPENLLLGLQGELKIADFGWSVHAPSLRRKTMCGTLDYL 795
MEELADAL+YCHGKKVIHRDIKPENLLLGLQGELKIADFGWSVHAPSLRRKTMCGTLDYL
Sbjct: 1 MEELADALMYCHGKKVIHRDIKPENLLLGLQGELKIADFGWSVHAPSLRRKTMCGTLDYL 60
Query: 796 PPEMIEGRTHNEKVDLWCIGVLCYELLVGNPPFESASHNETYRRIV 933
PPEMIEGR HNEKVDLWCIGVLCYELLVGNPPFESASHNETYRRIV
Sbjct: 61 PPEMIEGRMHNEKVDLWCIGVLCYELLVGNPPFESASHNETYRRIV 106
>ref|XP_856476.1| PREDICTED: similar to Serine/threonine-protein kinase PLK4
(Polo-like kinase 4) (PLK-4) (Serine/threonine-protein
kinase Sak) (Serine/threonine-protein kinase 18) isoform
4 [Canis familiaris].
Length = 967
Score = 157 bits (398), Expect = 1e-38
Identities = 77/216 (35%), Positives = 125/216 (57%), Gaps = 3/216 (1%)
Frame = +1
Query: 295 IDDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLQ 474
I+DF++G LGKG F VY A + VA+K++ K + K G+ +++ E++I L+
Sbjct: 9 IEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLK 68
Query: 475 HPNILRLYNYFYDRRRIYLILEYAPRGELYKELQ-KCRTFDEQRTATIMEELADALIYCH 651
HP+IL LYNYF D +YL+LE GE+ + L+ + + F E M ++ ++Y H
Sbjct: 69 HPSILELYNYFEDNNYVYLVLEMCHNGEMNRYLKNRMKPFSENEARHFMHQIITGMLYLH 128
Query: 652 GKKVIHRDIKPENLLLGLQGELKIADFGWS--VHAPSLRRKTMCGTLDYLPPEMIEGRTH 825
++HRD+ NLLL +KIADFG + + P + T+CGT +Y+ PE+ H
Sbjct: 129 SHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYTLCGTPNYISPEIATRSAH 188
Query: 826 NEKVDLWCIGVLCYELLVGNPPFESASHNETYRRIV 933
+ D+W +G + Y LL+G PPF++ + T ++V
Sbjct: 189 GLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVV 224
>ref|XP_533295.2| PREDICTED: similar to Serine/threonine-protein kinase PLK4
(Polo-like kinase 4) (PLK-4) (Serine/threonine-protein
kinase Sak) (Serine/threonine-protein kinase 18) isoform
1 [Canis familiaris].
Length = 969
Score = 157 bits (398), Expect = 1e-38
Identities = 77/216 (35%), Positives = 125/216 (57%), Gaps = 3/216 (1%)
Frame = +1
Query: 295 IDDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLQ 474
I+DF++G LGKG F VY A + VA+K++ K + K G+ +++ E++I L+
Sbjct: 9 IEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLK 68
Query: 475 HPNILRLYNYFYDRRRIYLILEYAPRGELYKELQ-KCRTFDEQRTATIMEELADALIYCH 651
HP+IL LYNYF D +YL+LE GE+ + L+ + + F E M ++ ++Y H
Sbjct: 69 HPSILELYNYFEDNYLIFQKII 332
>ref|NP_001095503.1| serine/threonine-protein kinase Sgk1 [Bos taurus].
Length = 431
Score = 150 bits (380), Expect = 1e-36
Identities = 87/256 (33%), Positives = 133/256 (51%), Gaps = 3/256 (1%)
Frame = +1
Query: 175 VTPSALVLMSRSNTQPTAAPGQKVVENSSGTPNFSTRSFTIDDFEIGRPLGKGKFGNVYL 354
++P + +N P +P Q++ S P+ DF + +GKG FG V L
Sbjct: 60 ISPPQEPELMNANPSPPPSPSQQINLGPSSNPHAKP-----SDFHFLKVIGKGSFGKVLL 114
Query: 355 AREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQA-HLQHPNILRLYNYFYDRRRIYL 531
AR K A+KVL K I K+ E + E + +++HP ++ L+ F ++Y
Sbjct: 115 ARHKAEEAFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYF 174
Query: 532 ILEYAPRGELYKELQKCRTFDEQRTATIMEELADALIYCHGKKVIHRDIKPENLLLGLQG 711
+L+Y GEL+ LQ+ R F E R E+A AL Y H +++RD+KPEN+LL QG
Sbjct: 175 VLDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQG 234
Query: 712 ELKIADFGWSVH--APSLRRKTMCGTLDYLPPEMIEGRTHNEKVDLWCIGVLCYELLVGN 885
+ + DFG + T CGT +YL PE++ + ++ VD WC+G + YE+L G
Sbjct: 235 HIVLTDFGLCKENIEHNGTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGL 294
Query: 886 PPFESASHNETYRRIV 933
PPF S + E Y I+
Sbjct: 295 PPFYSRNTAEMYDNIL 310
>ref|NP_001070331.1| protein kinase C eta type [Bos taurus].
Length = 682
Score = 148 bits (374), Expect = 6e-36
Identities = 86/249 (34%), Positives = 138/249 (55%), Gaps = 3/249 (1%)
Frame = +1
Query: 196 LMSRSNTQPTAAPGQKVVENSSGTPNFSTRSFTIDDFEIGRPLGKGKFGNVYLAREKKSH 375
L+SRS + G++ + +G S+ ID+FE R LGKG FG V LAR K++
Sbjct: 321 LVSRSTLR---RQGKESTKEGNGIGVNSSNRLGIDNFEFIRVLGKGSFGKVMLARIKETG 377
Query: 376 FIVALKVLFKSQI-EKEGVEHQLRREIEIQAHLQHPNILRLYNYFYDRRRIYLILEYAPR 552
+ A+KVL K I + + VE + + + HP + +L+ F R++ ++E+
Sbjct: 378 DLYAVKVLKKDVILQDDDVECTMTEKRILSLARSHPFLTQLFCCFQTPDRLFFVMEFVNG 437
Query: 553 GELYKELQKCRTFDEQRTATIMEELADALIYCHGKKVIHRDIKPENLLLGLQGELKIADF 732
G+L +QK R FDE R E+ AL++ H K +I+RD+K +N+LL +G K+ADF
Sbjct: 438 GDLMFHIQKSRRFDEARARFYAAEIISALMFLHDKGIIYRDLKLDNVLLDHEGHCKLADF 497
Query: 733 GWSVH--APSLRRKTMCGTLDYLPPEMIEGRTHNEKVDLWCIGVLCYELLVGNPPFESAS 906
G + T CGT DY+ PE+++ + VD W +GVL YE+L G+ PFE+ +
Sbjct: 498 GMCKEGICNGVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAEN 557
Query: 907 HNETYRRIV 933
++ + I+
Sbjct: 558 EDDLFEAIL 566
Database: RefSeq49_BP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 17,681,374
Number of sequences in database: 33,088
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33088
Number of Hits to DB: 43,835,974
Number of extensions: 1408534
Number of successful extensions: 7208
Number of sequences better than 1.0e-05: 618
Number of HSP's gapped: 6086
Number of HSP's successfully gapped: 642
Length of query: 311
Length of database: 17,681,374
Length adjustment: 102
Effective length of query: 209
Effective length of database: 14,306,398
Effective search space: 2990037182
Effective search space used: 2990037182
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)
NYVYLVLEMCHNGEMNRYLKNRMKPFSENEARHFMHQIITGMLYLH 128
Query: 652 GKKVIHRDIKPENLLLGLQGELKIADFGWS--VHAPSLRRKTMCGTLDYLPPEMIEGRTH 825
++HRD+ NLLL +KIADFG + + P + T+CGT +Y+ PE+ H
Sbjct: 129 SHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYTLCGTPNYISPEIATRSAH 188
Query: 826 NEKVDLWCIGVLCYELLVGNPPFESASHNETYRRIV 933
+ D+W +G + Y LL+G PPF++ + T ++V
Sbjct: 189 GLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVV 224
Database: RefSeq49_CP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,874,504
Number of sequences in database: 33,336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33336
Number of Hits to DB: 45,810,690
Number of extensions: 1451750
Number of successful extensions: 8040
Number of sequences better than 1.0e-05: 927
Number of HSP's gapped: 6498
Number of HSP's successfully gapped: 952
Length of query: 311
Length of database: 18,874,504
Length adjustment: 103
Effective length of query: 208
Effective length of database: 15,440,896
Effective search space: 3211706368
Effective search space used: 3211706368
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-013490
(934 letters)
Database: RefSeq49_SP.fasta
24,897 sequences; 11,343,932 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_999084.1| serine/threonine-protein kinase 12 [Sus scrofa]. 581 e-166
Alignment gi|NP_001020396.1| serine/threonine-protein kinase 6 [Sus scrof... 353 1e-97
Alignment gi|XP_003361412.1| PREDICTED: serine/threonine-protein kinase 6... 273 1e-73
Alignment gi|XP_003129251.1| PREDICTED: serine/threonine-protein kinase P... 157 8e-39
Alignment gi|XP_003129248.1| PREDICTED: serine/threonine-protein kinase P... 157 8e-39
Alignment gi|XP_003353259.1| PREDICTED: serine/threonine-protein kinase S... 150 1e-36
Alignment gi|XP_003353258.1| PREDICTED: serine/threonine-protein kinase S... 150 1e-36
Alignment gi|XP_003353257.1| PREDICTED: serine/threonine-protein kinase S... 150 1e-36
Alignment gi|XP_003121898.1| PREDICTED: protein kinase C eta type isoform... 147 8e-36
Alignment gi|XP_001924883.2| PREDICTED: protein kinase C eta type isoform... 147 8e-36
>ref|NP_999084.1| serine/threonine-protein kinase 12 [Sus scrofa].
Length = 344
Score = 581 bits (1497), Expect = e-166
Identities = 284/285 (99%), Positives = 284/285 (99%)
Frame = +1
Query: 76 MAQKENTYPWPYGRQTAQSGLNILPQRVLRKEAVTPSALVLMSRSNTQPTAAPGQKVVEN 255
MAQKENTYPWPYGRQTAQSGLNILPQRVLRKEAVTPSALVLMSRSNTQPTAAPGQKVVEN
Sbjct: 1 MAQKENTYPWPYGRQTAQSGLNILPQRVLRKEAVTPSALVLMSRSNTQPTAAPGQKVVEN 60
Query: 256 SSGTPNFSTRSFTIDDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEH 435
SSGTPNFSTRSFTIDDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEH
Sbjct: 61 SSGTPNFSTRSFTIDDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEH 120
Query: 436 QLRREIEIQAHLQHPNILRLYNYFYDRRRIYLILEYAPRGELYKELQKCRTFDEQRTATI 615
QLRREIEIQAHLQHPNILRLYNYFYDRRRIYLILEYAPR ELYKELQKCRTFDEQRTATI
Sbjct: 121 QLRREIEIQAHLQHPNILRLYNYFYDRRRIYLILEYAPRXELYKELQKCRTFDEQRTATI 180
Query: 616 MEELADALIYCHGKKVIHRDIKPENLLLGLQGELKIADFGWSVHAPSLRRKTMCGTLDYL 795
MEELADALIYCHGKKVIHRDIKPENLLLGLQGELKIADFGWSVHAPSLRRKTMCGTLDYL
Sbjct: 181 MEELADALIYCHGKKVIHRDIKPENLLLGLQGELKIADFGWSVHAPSLRRKTMCGTLDYL 240
Query: 796 PPEMIEGRTHNEKVDLWCIGVLCYELLVGNPPFESASHNETYRRI 930
PPEMIEGRTHNEKVDLWCIGVLCYELLVGNPPFESASHNETYRRI
Sbjct: 241 PPEMIEGRTHNEKVDLWCIGVLCYELLVGNPPFESASHNETYRRI 285
>ref|NP_001020396.1| serine/threonine-protein kinase 6 [Sus scrofa].
Length = 405
Score = 353 bits (905), Expect = 1e-97
Identities = 180/273 (65%), Positives = 212/273 (77%), Gaps = 13/273 (4%)
Frame = +1
Query: 151 QRVLRKEAVTPSALVLMSR--SNTQPT-----AAPG---QKVVENSSGTPNFSTRSFTID 300
Q + +K++ S +SR SNTQ + AAPG +K + R + ++
Sbjct: 72 QNLKQKQSQATSGPRPVSRPLSNTQQSEQPQPAAPGNNPEKEAASKQKNEESKKRQWALE 131
Query: 301 DFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLQHP 480
DFEIGRPLGKGKFGNVYLAREK+S FI+ALKVLFK+Q+EK GVEHQLRRE+EIQ+HL+HP
Sbjct: 132 DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHP 191
Query: 481 NILRLYNYFYDRRRIYLILEYAPRGELYKEL---QKCRTFDEQRTATIMEELADALIYCH 651
NILRLY YF+D R+YLILEYAP G +Y+EL QK FDEQRTAT + ELA+AL YCH
Sbjct: 192 NILRLYGYFHDATRVYLILEYAPLGAVYRELRELQKLSKFDEQRTATYITELANALSYCH 251
Query: 652 GKKVIHRDIKPENLLLGLQGELKIADFGWSVHAPSLRRKTMCGTLDYLPPEMIEGRTHNE 831
K+VIHRDIKPENLLLG GELKIADFGWSVHAPS RR T+CGTLDYLPPEMIEGR H+E
Sbjct: 252 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDE 311
Query: 832 KVDLWCIGVLCYELLVGNPPFESASHNETYRRI 930
KVDLW +GVLCYE LVG PPFE+ ++ ETY+RI
Sbjct: 312 KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 344
>ref|XP_003361412.1| PREDICTED: serine/threonine-protein kinase 6-like [Sus scrofa].
Length = 391
Score = 273 bits (698), Expect = 1e-73
Identities = 144/244 (59%), Positives = 172/244 (70%), Gaps = 8/244 (3%)
Frame = +1
Query: 208 SNTQP-----TAAPG---QKVVENSSGTPNFSTRSFTIDDFEIGRPLGKGKFGNVYLARE 363
SNTQ AAPG +K V + R + ++DFE+G P GKGKFGNVYLARE
Sbjct: 93 SNTQQGEQPQPAAPGNNPEKEVASRQKNEESKKRQWALEDFEVGCPPGKGKFGNVYLARE 152
Query: 364 KKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLQHPNILRLYNYFYDRRRIYLILEY 543
K+S FI+ALK+LFK+Q+EK GVEH LRRE+EIQ+HL+HPNILRL LEY
Sbjct: 153 KQSKFILALKILFKAQLEKVGVEHHLRREVEIQSHLRHPNILRL-------------LEY 199
Query: 544 APRGELYKELQKCRTFDEQRTATIMEELADALIYCHGKKVIHRDIKPENLLLGLQGELKI 723
P G +Y+ELQK FDEQRTA + ELA+AL YCH K RDIKPENLLLG GELKI
Sbjct: 200 VPLGAVYRELQKLSKFDEQRTAAYITELANALSYCHSK----RDIKPENLLLGSAGELKI 255
Query: 724 ADFGWSVHAPSLRRKTMCGTLDYLPPEMIEGRTHNEKVDLWCIGVLCYELLVGNPPFESA 903
A+FGWSVHAPS RR T+C TLDYLPPEMI+G+ H+EKVDLW +G LCYE L+ + P +
Sbjct: 256 ANFGWSVHAPSSRRTTLCSTLDYLPPEMIKGQMHDEKVDLWSLGALCYEFLLKHNPSQRP 315
Query: 904 SHNE 915
+ E
Sbjct: 316 TLKE 319
>ref|XP_003129251.1| PREDICTED: serine/threonine-protein kinase PLK4-like isoform 1 [Sus
scrofa].
Length = 964
Score = 157 bits (397), Expect = 8e-39
Identities = 78/216 (36%), Positives = 124/216 (57%), Gaps = 3/216 (1%)
Frame = +1
Query: 295 IDDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLQ 474
I+DF++G LGKG F VY A + VA+K++ K + K G+ +++ E++I L+
Sbjct: 9 IEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLK 68
Query: 475 HPNILRLYNYFYDRRRIYLILEYAPRGELYKELQKCR-TFDEQRTATIMEELADALIYCH 651
HP+IL LYNYF D +YL+LE GE+ + L+ R F E M ++ ++Y H
Sbjct: 69 HPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRRKPFSENEARHFMHQIITGMLYLH 128
Query: 652 GKKVIHRDIKPENLLLGLQGELKIADFGWS--VHAPSLRRKTMCGTLDYLPPEMIEGRTH 825
++HRD+ NLLL +KIADFG + + P + T+CGT +Y+ PE+ H
Sbjct: 129 SHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYTLCGTPNYISPEIATRSAH 188
Query: 826 NEKVDLWCIGVLCYELLVGNPPFESASHNETYRRIV 933
+ D+W +G + Y LL+G PPF++ + T ++V
Sbjct: 189 GLESDIWSLGCMFYTLLIGRPPFDTDTVKNTLNKVV 224
>ref|XP_003129248.1| PREDICTED: serine/threonine-protein kinase PLK4-like isoform 1 [Sus
scrofa].
Length = 964
Score = 157 bits (397), Expect = 8e-39
Identities = 78/216 (36%), Positives = 124/216 (57%), Gaps = 3/216 (1%)
Frame = +1
Query: 295 IDDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLQ 474
I+DF++G LGKG F VY A + VA+K++ K + K G+ +++ E++I L+
Sbjct: 9 IEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLK 68
Query: 475 HPNILRLYNYFYDRRRIYLILEYAPRGELYKELQKCR-TFDEQRTATIMEELADALIYCH 651
HP+IL LYNYF D +YL+LE GE+ + L+ R F E M ++ ++Y H
Sbjct: 69 HPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRRKPFSENEARHFMHQIITGMLYLH 128
Query: 652 GKKVIHRDIKPENLLLGLQGELKIADFGWS--VHAPSLRRKTMCGTLDYLPPEMIEGRTH 825
++HRD+ NLLL +KIADFG + + P + T+CGT +Y+ PE+ H
Sbjct: 129 SHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYTLCGTPNYISPEIATRSAH 188
Query: 826 NEKVDLWCIGVLCYELLVGNPPFESASHNETYRRIV 933
+ D+W +G + Y LL+G PPF++ + T ++V
Sbjct: 189 GLESDIWSLGCMFYTLLIGRPPFDTDTVKNTLNKVV 224
>ref|XP_003353259.1| PREDICTED: serine/threonine-protein kinase Sgk1-like isoform 3 [Sus
scrofa].
Length = 417
Score = 150 bits (379), Expect = 1e-36
Identities = 86/248 (34%), Positives = 130/248 (52%), Gaps = 3/248 (1%)
Frame = +1
Query: 199 MSRSNTQPTAAPGQKVVENSSGTPNFSTRSFTIDDFEIGRPLGKGKFGNVYLAREKKSHF 378
+ +N P +P Q++ S P+ DF + +GKG FG V LAR K
Sbjct: 54 LMNANPSPPPSPSQQINLGPSSNPHAKP-----SDFHFLKVIGKGSFGKVLLARHKAEEA 108
Query: 379 IVALKVLFKSQIEKEGVEHQLRREIEIQA-HLQHPNILRLYNYFYDRRRIYLILEYAPRG 555
A+KVL K I K+ E + E + +++HP ++ L+ F ++Y +L+Y G
Sbjct: 109 FYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYINGG 168
Query: 556 ELYKELQKCRTFDEQRTATIMEELADALIYCHGKKVIHRDIKPENLLLGLQGELKIADFG 735
EL+ LQ+ R F E R E+A AL Y H +++RD+KPEN+LL QG + + DFG
Sbjct: 169 ELFYHLQRERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQGHIVLTDFG 228
Query: 736 WSVH--APSLRRKTMCGTLDYLPPEMIEGRTHNEKVDLWCIGVLCYELLVGNPPFESASH 909
+ T CGT +YL PE++ + ++ VD WC+G + YE+L G PPF S +
Sbjct: 229 LCKENIEHNGTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNT 288
Query: 910 NETYRRIV 933
E Y I+
Sbjct: 289 AEMYDNIL 296
>ref|XP_003353258.1| PREDICTED: serine/threonine-protein kinase Sgk1-like isoform 2 [Sus
scrofa].
Length = 445
Score = 150 bits (379), Expect = 1e-36
Identities = 86/248 (34%), Positives = 130/248 (52%), Gaps = 3/248 (1%)
Frame = +1
Query: 199 MSRSNTQPTAAPGQKVVENSSGTPNFSTRSFTIDDFEIGRPLGKGKFGNVYLAREKKSHF 378
+ +N P +P Q++ S P+ DF + +GKG FG V LAR K
Sbjct: 82 LMNANPSPPPSPSQQINLGPSSNPHAKP-----SDFHFLKVIGKGSFGKVLLARHKAEEA 136
Query: 379 IVALKVLFKSQIEKEGVEHQLRREIEIQA-HLQHPNILRLYNYFYDRRRIYLILEYAPRG 555
A+KVL K I K+ E + E + +++HP ++ L+ F ++Y +L+Y G
Sbjct: 137 FYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYINGG 196
Query: 556 ELYKELQKCRTFDEQRTATIMEELADALIYCHGKKVIHRDIKPENLLLGLQGELKIADFG 735
EL+ LQ+ R F E R E+A AL Y H +++RD+KPEN+LL QG + + DFG
Sbjct: 197 ELFYHLQRERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQGHIVLTDFG 256
Query: 736 WSVH--APSLRRKTMCGTLDYLPPEMIEGRTHNEKVDLWCIGVLCYELLVGNPPFESASH 909
+ T CGT +YL PE++ + ++ VD WC+G + YE+L G PPF S +
Sbjct: 257 LCKENIEHNGTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNT 316
Query: 910 NETYRRIV 933
E Y I+
Sbjct: 317 AEMYDNIL 324
>ref|XP_003353257.1| PREDICTED: serine/threonine-protein kinase Sgk1-like isoform 1 [Sus
scrofa].
Length = 431
Score = 150 bits (379), Expect = 1e-36
Identities = 86/248 (34%), Positives = 130/248 (52%), Gaps = 3/248 (1%)
Frame = +1
Query: 199 MSRSNTQPTAAPGQKVVENSSGTPNFSTRSFTIDDFEIGRPLGKGKFGNVYLAREKKSHF 378
+ +N P +P Q++ S P+ DF + +GKG FG V LAR K
Sbjct: 68 LMNANPSPPPSPSQQINLGPSSNPHAKP-----SDFHFLKVIGKGSFGKVLLARHKAEEA 122
Query: 379 IVALKVLFKSQIEKEGVEHQLRREIEIQA-HLQHPNILRLYNYFYDRRRIYLILEYAPRG 555
A+KVL K I K+ E + E + +++HP ++ L+ F ++Y +L+Y G
Sbjct: 123 FYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYINGG 182
Query: 556 ELYKELQKCRTFDEQRTATIMEELADALIYCHGKKVIHRDIKPENLLLGLQGELKIADFG 735
EL+ LQ+ R F E R E+A AL Y H +++RD+KPEN+LL QG + + DFG
Sbjct: 183 ELFYHLQRERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQGHIVLTDFG 242
Query: 736 WSVH--APSLRRKTMCGTLDYLPPEMIEGRTHNEKVDLWCIGVLCYELLVGNPPFESASH 909
+ T CGT +YL PE++ + ++ VD WC+G + YE+L G PPF S +
Sbjct: 243 LCKENIEHNGTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNT 302
Query: 910 NETYRRIV 933
E Y I+
Sbjct: 303 AEMYDNIL 310
>ref|XP_003121898.1| PREDICTED: protein kinase C eta type isoform 2 [Sus scrofa].
Length = 679
Score = 147 bits (371), Expect = 8e-36
Identities = 85/249 (34%), Positives = 138/249 (55%), Gaps = 3/249 (1%)
Frame = +1
Query: 196 LMSRSNTQPTAAPGQKVVENSSGTPNFSTRSFTIDDFEIGRPLGKGKFGNVYLAREKKSH 375
L+SRS + G++ + +G S+ ID+FE R LGKG FG V LAR K++
Sbjct: 319 LVSRSTLR---RQGKESTKEGNGIGVNSSNRLGIDNFEFIRVLGKGSFGKVMLARIKETG 375
Query: 376 FIVALKVLFKSQI-EKEGVEHQLRREIEIQAHLQHPNILRLYNYFYDRRRIYLILEYAPR 552
+ A+KVL K I + + VE + + + HP + +L+ F R++ ++E+
Sbjct: 376 DLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQSPDRLFFVMEFVNG 435
Query: 553 GELYKELQKCRTFDEQRTATIMEELADALIYCHGKKVIHRDIKPENLLLGLQGELKIADF 732
G+L +QK R F+E R E+ AL++ H K +I+RD+K +N+LL +G K+ADF
Sbjct: 436 GDLMFHIQKSRRFEEARARFYAAEIISALMFLHDKGIIYRDLKLDNVLLDHEGHCKLADF 495
Query: 733 GWSVH--APSLRRKTMCGTLDYLPPEMIEGRTHNEKVDLWCIGVLCYELLVGNPPFESAS 906
G + T CGT DY+ PE+++ + VD W +GVL YE+L G+ PFE+ +
Sbjct: 496 GMCKEGICNGVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAEN 555
Query: 907 HNETYRRIV 933
++ + I+
Sbjct: 556 EDDLFEAIL 564
>ref|XP_001924883.2| PREDICTED: protein kinase C eta type isoform 1 [Sus scrofa].
Length = 682
Score = 147 bits (371), Expect = 8e-36
Identities = 85/249 (34%), Positives = 138/249 (55%), Gaps = 3/249 (1%)
Frame = +1
Query: 196 LMSRSNTQPTAAPGQKVVENSSGTPNFSTRSFTIDDFEIGRPLGKGKFGNVYLAREKKSH 375
L+SRS + G++ + +G S+ ID+FE R LGKG FG V LAR K++
Sbjct: 322 LVSRSTLR---RQGKESTKEGNGIGVNSSNRLGIDNFEFIRVLGKGSFGKVMLARIKETG 378
Query: 376 FIVALKVLFKSQI-EKEGVEHQLRREIEIQAHLQHPNILRLYNYFYDRRRIYLILEYAPR 552
+ A+KVL K I + + VE + + + HP + +L+ F R++ ++E+
Sbjct: 379 DLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQSPDRLFFVMEFVNG 438
Query: 553 GELYKELQKCRTFDEQRTATIMEELADALIYCHGKKVIHRDIKPENLLLGLQGELKIADF 732
G+L +QK R F+E R E+ AL++ H K +I+RD+K +N+LL +G K+ADF
Sbjct: 439 GDLMFHIQKSRRFEEARARFYAAEIISALMFLHDKGIIYRDLKLDNVLLDHEGHCKLADF 498
Query: 733 GWSVH--APSLRRKTMCGTLDYLPPEMIEGRTHNEKVDLWCIGVLCYELLVGNPPFESAS 906
G + T CGT DY+ PE+++ + VD W +GVL YE+L G+ PFE+ +
Sbjct: 499 GMCKEGICNGVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAEN 558
Query: 907 HNETYRRIV 933
++ + I+
Sbjct: 559 EDDLFEAIL 567
Database: RefSeq49_SP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 11,343,932
Number of sequences in database: 24,897
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 24897
Number of Hits to DB: 28,340,796
Number of extensions: 912615
Number of successful extensions: 4907
Number of sequences better than 1.0e-05: 440
Number of HSP's gapped: 4145
Number of HSP's successfully gapped: 451
Length of query: 311
Length of database: 11,343,932
Length adjustment: 99
Effective length of query: 212
Effective length of database: 8,879,129
Effective search space: 1882375348
Effective search space used: 1882375348
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 33 (17.3 bits)
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-013490
(934 letters)
Database: RefSeq49_MP.fasta
30,036 sequences; 15,617,559 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_035626.1| serine/threonine-protein kinase 12 [Mus musculu... 495 e-140
Alignment gi|NP_001074435.1| serine/threonine-protein kinase 13 isoform b... 370 e-103
Alignment gi|NP_001074434.1| serine/threonine-protein kinase 13 isoform a... 370 e-103
Alignment gi|NP_065597.2| serine/threonine-protein kinase 13 isoform b [M... 370 e-103
Alignment gi|NP_035627.1| serine/threonine-protein kinase 6 [Mus musculus]. 361 e-100
Alignment gi|NP_035625.2| serine/threonine-protein kinase PLK4 [Mus muscu... 158 7e-39
Alignment gi|NP_001004363.1| NUAK family SNF1-like kinase 1 [Mus musculus]. 154 9e-38
Alignment gi|NP_001155321.1| serine/threonine-protein kinase Sgk1 isoform... 154 1e-37
Alignment gi|NP_035192.2| 3-phosphoinositide-dependent protein kinase 1 i... 152 3e-37
Alignment gi|NP_001074242.1| 3-phosphoinositide-dependent protein kinase ... 152 3e-37
>ref|NP_035626.1| serine/threonine-protein kinase 12 [Mus musculus].
Length = 345
Score = 495 bits (1274), Expect = e-140
Identities = 245/291 (84%), Positives = 260/291 (89%), Gaps = 5/291 (1%)
Frame = +1
Query: 76 MAQKENTYPWPYGRQTAQSGLNILPQRVLRKEAVTPSALVLMSRSNTQPTAAPGQKVVEN 255
MAQKEN YPWPYG +T+QSGLN L QRVLRKE T SAL L++R N+Q TAAPGQK+ EN
Sbjct: 1 MAQKENAYPWPYGSKTSQSGLNTLSQRVLRKEPATTSALALVNRFNSQSTAAPGQKLAEN 60
Query: 256 SSGTPNFSTRS-----FTIDDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEK 420
S S S FTID+FEIGRPLGKGKFGNVYLAREKKS FIVALK+LFKSQIEK
Sbjct: 61 KSQGSTASQGSQNKQPFTIDNFEIGRPLGKGKFGNVYLAREKKSRFIVALKILFKSQIEK 120
Query: 421 EGVEHQLRREIEIQAHLQHPNILRLYNYFYDRRRIYLILEYAPRGELYKELQKCRTFDEQ 600
EGVEHQLRREIEIQAHL+HPNIL+LYNYFYD++RIYLILEYAPRGELYKELQK RTFDEQ
Sbjct: 121 EGVEHQLRREIEIQAHLKHPNILQLYNYFYDQQRIYLILEYAPRGELYKELQKSRTFDEQ 180
Query: 601 RTATIMEELADALIYCHGKKVIHRDIKPENLLLGLQGELKIADFGWSVHAPSLRRKTMCG 780
RTATIMEEL+DAL YCH KKVIHRDIKPENLLLGLQGELKIADFGWSVHAPSLRRKTMCG
Sbjct: 181 RTATIMEELSDALTYCHKKKVIHRDIKPENLLLGLQGELKIADFGWSVHAPSLRRKTMCG 240
Query: 781 TLDYLPPEMIEGRTHNEKVDLWCIGVLCYELLVGNPPFESASHNETYRRIV 933
TLDYLPPEMIEGR HNE VDLWCIGVLCYEL+VGNPPFES SH+ETYRRIV
Sbjct: 241 TLDYLPPEMIEGRMHNEMVDLWCIGVLCYELMVGNPPFESPSHSETYRRIV 291
>ref|NP_001074435.1| serine/threonine-protein kinase 13 isoform b [Mus musculus].
Length = 276
Score = 370 bits (950), Expect = e-103
Identities = 179/222 (80%), Positives = 200/222 (90%), Gaps = 1/222 (0%)
Frame = +1
Query: 268 PNFSTRS-FTIDDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLR 444
P+ STR FTI+DFEIGRPLG+GKFG VYLAR K++HFIVALKVLFKS+IEKEG+EHQLR
Sbjct: 3 PSTSTRKHFTINDFEIGRPLGRGKFGRVYLARLKENHFIVALKVLFKSEIEKEGLEHQLR 62
Query: 445 REIEIQAHLQHPNILRLYNYFYDRRRIYLILEYAPRGELYKELQKCRTFDEQRTATIMEE 624
RE+EIQAHLQH NILRLYNYFYD RIYLILEYAP GELYKELQ+ + D+QRTATI++E
Sbjct: 63 REVEIQAHLQHRNILRLYNYFYDDTRIYLILEYAPGGELYKELQRHQKLDQQRTATIIQE 122
Query: 625 LADALIYCHGKKVIHRDIKPENLLLGLQGELKIADFGWSVHAPSLRRKTMCGTLDYLPPE 804
L+DAL YCH KKVIHRDIKPENLLLGL GE+KI+DFGWSVH PSLRRKTMCGTLDYLPPE
Sbjct: 123 LSDALTYCHEKKVIHRDIKPENLLLGLNGEVKISDFGWSVHTPSLRRKTMCGTLDYLPPE 182
Query: 805 MIEGRTHNEKVDLWCIGVLCYELLVGNPPFESASHNETYRRI 930
MI + +NE VDLWCIGVLCYELLVG PPFES++ +ETYRRI
Sbjct: 183 MIAQKPYNEMVDLWCIGVLCYELLVGKPPFESSTSSETYRRI 224
>ref|NP_001074434.1| serine/threonine-protein kinase 13 isoform a [Mus musculus].
Length = 315
Score = 370 bits (950), Expect = e-103
Identities = 179/222 (80%), Positives = 200/222 (90%), Gaps = 1/222 (0%)
Frame = +1
Query: 268 PNFSTRS-FTIDDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLR 444
P+ STR FTI+DFEIGRPLG+GKFG VYLAR K++HFIVALKVLFKS+IEKEG+EHQLR
Sbjct: 42 PSTSTRKHFTINDFEIGRPLGRGKFGRVYLARLKENHFIVALKVLFKSEIEKEGLEHQLR 101
Query: 445 REIEIQAHLQHPNILRLYNYFYDRRRIYLILEYAPRGELYKELQKCRTFDEQRTATIMEE 624
RE+EIQAHLQH NILRLYNYFYD RIYLILEYAP GELYKELQ+ + D+QRTATI++E
Sbjct: 102 REVEIQAHLQHRNILRLYNYFYDDTRIYLILEYAPGGELYKELQRHQKLDQQRTATIIQE 161
Query: 625 LADALIYCHGKKVIHRDIKPENLLLGLQGELKIADFGWSVHAPSLRRKTMCGTLDYLPPE 804
L+DAL YCH KKVIHRDIKPENLLLGL GE+KI+DFGWSVH PSLRRKTMCGTLDYLPPE
Sbjct: 162 LSDALTYCHEKKVIHRDIKPENLLLGLNGEVKISDFGWSVHTPSLRRKTMCGTLDYLPPE 221
Query: 805 MIEGRTHNEKVDLWCIGVLCYELLVGNPPFESASHNETYRRI 930
MI + +NE VDLWCIGVLCYELLVG PPFES++ +ETYRRI
Sbjct: 222 MIAQKPYNEMVDLWCIGVLCYELLVGKPPFESSTSSETYRRI 263
>ref|NP_065597.2| serine/threonine-protein kinase 13 isoform b [Mus musculus].
Length = 276
Score = 370 bits (950), Expect = e-103
Identities = 179/222 (80%), Positives = 200/222 (90%), Gaps = 1/222 (0%)
Frame = +1
Query: 268 PNFSTRS-FTIDDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLR 444
P+ STR FTI+DFEIGRPLG+GKFG VYLAR K++HFIVALKVLFKS+IEKEG+EHQLR
Sbjct: 3 PSTSTRKHFTINDFEIGRPLGRGKFGRVYLARLKENHFIVALKVLFKSEIEKEGLEHQLR 62
Query: 445 REIEIQAHLQHPNILRLYNYFYDRRRIYLILEYAPRGELYKELQKCRTFDEQRTATIMEE 624
RE+EIQAHLQH NILRLYNYFYD RIYLILEYAP GELYKELQ+ + D+QRTATI++E
Sbjct: 63 REVEIQAHLQHRNILRLYNYFYDDTRIYLILEYAPGGELYKELQRHQKLDQQRTATIIQE 122
Query: 625 LADALIYCHGKKVIHRDIKPENLLLGLQGELKIADFGWSVHAPSLRRKTMCGTLDYLPPE 804
L+DAL YCH KKVIHRDIKPENLLLGL GE+KI+DFGWSVH PSLRRKTMCGTLDYLPPE
Sbjct: 123 LSDALTYCHEKKVIHRDIKPENLLLGLNGEVKISDFGWSVHTPSLRRKTMCGTLDYLPPE 182
Query: 805 MIEGRTHNEKVDLWCIGVLCYELLVGNPPFESASHNETYRRI 930
MI + +NE VDLWCIGVLCYELLVG PPFES++ +ETYRRI
Sbjct: 183 MIAQKPYNEMVDLWCIGVLCYELLVGKPPFESSTSSETYRRI 224
>ref|NP_035627.1| serine/threonine-protein kinase 6 [Mus musculus].
Length = 417
Score = 361 bits (926), Expect = e-100
Identities = 180/288 (62%), Positives = 216/288 (75%), Gaps = 2/288 (0%)
Frame = +1
Query: 73 RMAQKENTYPWPYGRQTAQSGLNILPQRVLRKEAVTPSALVLMSRSNTQPTAAPGQKVVE 252
R+ N+ P Q +G P+++ P + + + N QP A+ E
Sbjct: 67 RVLCPSNSQRVPSQAQKLGAGQKPAPKQLPAASVPRPVSRLNNPQKNEQPAASGNDSEKE 126
Query: 253 NSS--GTPNFSTRSFTIDDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEG 426
+S T + R +T++DF+IGRPLGKGKFGNVYLARE++S FI+ALKVLFK+Q+EK
Sbjct: 127 QASLQKTEDTKKRQWTLEDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAN 186
Query: 427 VEHQLRREIEIQAHLQHPNILRLYNYFYDRRRIYLILEYAPRGELYKELQKCRTFDEQRT 606
VEHQLRRE+EIQ+HL+HPNILRLY YF+D R+YLILEYAP G +Y+ELQK FDEQRT
Sbjct: 187 VEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRT 246
Query: 607 ATIMEELADALIYCHGKKVIHRDIKPENLLLGLQGELKIADFGWSVHAPSLRRKTMCGTL 786
AT + ELA+AL YCH K+VIHRDIKPENLLLG GELKIADFGWSVHAPS RR TMCGTL
Sbjct: 247 ATYITELANALSYCHSKRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRTTMCGTL 306
Query: 787 DYLPPEMIEGRTHNEKVDLWCIGVLCYELLVGNPPFESASHNETYRRI 930
DYLPPEMIEGR H+EKVDLW +GVLCYE LVG PPFE+ ++ ETYRRI
Sbjct: 307 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRI 354
>ref|NP_035625.2| serine/threonine-protein kinase PLK4 [Mus musculus].
Length = 925
Score = 158 bits (399), Expect = 7e-39
Identities = 75/216 (34%), Positives = 127/216 (58%), Gaps = 3/216 (1%)
Frame = +1
Query: 295 IDDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLQ 474
I+DF++G LGKG F VY A + VA+K++ K + K G+ +++ E++I L+
Sbjct: 9 IEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLK 68
Query: 475 HPNILRLYNYFYDRRRIYLILEYAPRGELYKELQ-KCRTFDEQRTATIMEELADALIYCH 651
HP++L LYNYF D +YL+LE GE+ + L+ + + F E+ M ++ ++Y H
Sbjct: 69 HPSVLELYNYFEDNNYVYLVLEMCHNGEMNRYLKNRMKPFSEREARHFMHQIITGMLYLH 128
Query: 652 GKKVIHRDIKPENLLLGLQGELKIADFGWS--VHAPSLRRKTMCGTLDYLPPEMIEGRTH 825
++HRD+ N+LL +KIADFG + ++ P + T+CGT +Y+ PE+ H
Sbjct: 129 SHGILHRDLTLSNILLTRNMNIKIADFGLATQLNMPHEKHYTLCGTPNYISPEIATRSAH 188
Query: 826 NEKVDLWCIGVLCYELLVGNPPFESASHNETYRRIV 933
+ D+W +G + Y LL+G PPF++ + T ++V
Sbjct: 189 GLESDIWSLGCMFYTLLIGRPPFDTDTVKNTLNKVV 224
>ref|NP_001004363.1| NUAK family SNF1-like kinase 1 [Mus musculus].
Length = 658
Score = 154 bits (389), Expect = 9e-38
Identities = 82/211 (38%), Positives = 124/211 (58%), Gaps = 2/211 (0%)
Frame = +1
Query: 304 FEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLQHPN 483
+E+ LGKG +G V A E+ S +VA+K + K +I+ E +RREIEI + L HP+
Sbjct: 56 YELQETLGKGTYGKVKRATERFSGRVVAIKSIRKDKIKDELDMVHIRREIEIMSSLNHPH 115
Query: 484 ILRLYNYFYDRRRIYLILEYAPRGELYKELQKCRTFDEQRTATIMEELADALIYCHGKKV 663
I+ +Y F ++ +I +I+EYA +GELY + + R E+ T ++ A+ YCH V
Sbjct: 116 IISIYEVFENKDKIVIIMEYASKGELYDYISERRRLSERETRHFFRQIVSAVHYCHKNGV 175
Query: 664 IHRDIKPENLLLGLQGELKIADFGWS-VHAPSLRRKTMCGTLDYLPPEMIEGRTH-NEKV 837
+HRD+K EN+LL +KIADFG S ++ +T CG+ Y PE++ GR + +V
Sbjct: 176 VHRDLKLENILLDDNCNIKIADFGLSNLYQKDKFLQTFCGSPLYASPEIVNGRPYRGPEV 235
Query: 838 DLWCIGVLCYELLVGNPPFESASHNETYRRI 930
D W +GVL Y L+ G PF+ H R+I
Sbjct: 236 DSWALGVLLYTLIYGTMPFDGFDHKNLIRQI 266
>ref|NP_001155321.1| serine/threonine-protein kinase Sgk1 isoform c [Mus musculus].
Length = 417
Score = 154 bits (388), Expect = 1e-37
Identities = 99/300 (33%), Positives = 148/300 (49%), Gaps = 17/300 (5%)
Frame = +1
Query: 85 KENTY--PWPYGRQTAQSGLNILPQRVLR-----KEAVTPSALVL-------MSRSNTQP 222
KE T PW + + GLN Q++ K A S L + + +N P
Sbjct: 2 KEETLRSPWKAFMKQRRMGLNDFIQKIASNTYACKHAEVQSILKMSHPQEPELMNANPSP 61
Query: 223 TAAPGQKVVENSSGTPNFSTRSFTIDDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLF 402
+P Q++ S P+ DF + +GKG FG V LAR K A+KVL
Sbjct: 62 PPSPSQQINLGPSSNPHAKP-----SDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQ 116
Query: 403 KSQIEKEGVEHQLRREIEIQA-HLQHPNILRLYNYFYDRRRIYLILEYAPRGELYKELQK 579
K I K+ E + E + +++HP ++ L+ F ++Y +L+Y GEL+ LQ+
Sbjct: 117 KKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQR 176
Query: 580 CRTFDEQRTATIMEELADALIYCHGKKVIHRDIKPENLLLGLQGELKIADFGWSVH--AP 753
R F E R E+A AL Y H +++RD+KPEN+LL QG + + DFG
Sbjct: 177 ERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEH 236
Query: 754 SLRRKTMCGTLDYLPPEMIEGRTHNEKVDLWCIGVLCYELLVGNPPFESASHNETYRRIV 933
+ T CGT +YL PE++ + ++ VD WC+G + YE+L G PPF S + E Y I+
Sbjct: 237 NGTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNIL 296
>ref|NP_035192.2| 3-phosphoinositide-dependent protein kinase 1 isoform A [Mus
musculus].
Length = 559
Score = 152 bits (385), Expect = 3e-37
Identities = 80/216 (37%), Positives = 122/216 (56%), Gaps = 4/216 (1%)
Frame = +1
Query: 298 DDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLQH 477
+DF+ G+ LG+G F V LARE + A+K+L K I KE + RE ++ + L H
Sbjct: 83 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 142
Query: 478 PNILRLYNYFYDRRRIYLILEYAPRGELYKELQKCRTFDEQRTATIMEELADALIYCHGK 657
P ++LY F D ++Y L YA GEL K ++K +FDE T E+ AL Y HGK
Sbjct: 143 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 202
Query: 658 KVIHRDIKPENLLLGLQGELKIADFG----WSVHAPSLRRKTMCGTLDYLPPEMIEGRTH 825
+IHRD+KPEN+LL ++I DFG S + R + GT Y+ PE++ ++
Sbjct: 203 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSA 262
Query: 826 NEKVDLWCIGVLCYELLVGNPPFESASHNETYRRIV 933
+ DLW +G + Y+L+ G PPF + + +++I+
Sbjct: 263 CKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKII 298
>ref|NP_001074242.1| 3-phosphoinositide-dependent protein kinase 1 isoform B [Mus
musculus].
Length = 522
Score = 152 bits (385), Expect = 3e-37
Identities = 80/216 (37%), Positives = 122/216 (56%), Gaps = 4/216 (1%)
Frame = +1
Query: 298 DDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLQH 477
+DF+ G+ LG+G F V LARE + A+K+L K I KE + RE ++ + L H
Sbjct: 83 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 142
Query: 478 PNILRLYNYFYDRRRIYLILEYAPRGELYKELQKCRTFDEQRTATIMEELADALIYCHGK 657
P ++LY F D ++Y L YA GEL K ++K +FDE T E+ AL Y HGK
Sbjct: 143 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 202
Query: 658 KVIHRDIKPENLLLGLQGELKIADFG----WSVHAPSLRRKTMCGTLDYLPPEMIEGRTH 825
+IHRD+KPEN+LL ++I DFG S + R + GT Y+ PE++ ++
Sbjct: 203 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSA 262
Query: 826 NEKVDLWCIGVLCYELLVGNPPFESASHNETYRRIV 933
+ DLW +G + Y+L+ G PPF + + +++I+
Sbjct: 263 CKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKII 298
Database: RefSeq49_MP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 15,617,559
Number of sequences in database: 30,036
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 30036
Number of Hits to DB: 37,619,800
Number of extensions: 1170894
Number of successful extensions: 6475
Number of sequences better than 1.0e-05: 680
Number of HSP's gapped: 5257
Number of HSP's successfully gapped: 699
Length of query: 311
Length of database: 15,617,559
Length adjustment: 101
Effective length of query: 210
Effective length of database: 12,583,923
Effective search space: 2642623830
Effective search space used: 2642623830
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-013490
(934 letters)
Database: RefSeq49_HP.fasta
32,964 sequences; 18,297,164 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_004208.2| serine/threonine-protein kinase 12 [Homo sapien... 550 e-157
Alignment gi|NP_001015878.1| serine/threonine-protein kinase 13 isoform 1... 402 e-112
Alignment gi|NP_003151.2| serine/threonine-protein kinase 13 isoform 3 [H... 400 e-112
Alignment gi|NP_001015879.1| serine/threonine-protein kinase 13 isoform 2... 400 e-112
Alignment gi|NP_940835.1| serine/threonine-protein kinase 6 [Homo sapiens]. 354 6e-98
Alignment gi|NP_940839.1| serine/threonine-protein kinase 6 [Homo sapiens]. 354 6e-98
Alignment gi|NP_940838.1| serine/threonine-protein kinase 6 [Homo sapiens]. 354 6e-98
Alignment gi|NP_940837.1| serine/threonine-protein kinase 6 [Homo sapiens]. 354 6e-98
Alignment gi|NP_940836.1| serine/threonine-protein kinase 6 [Homo sapiens]. 354 6e-98
Alignment gi|NP_003591.2| serine/threonine-protein kinase 6 [Homo sapiens]. 354 6e-98
>ref|NP_004208.2| serine/threonine-protein kinase 12 [Homo sapiens].
Length = 344
Score = 550 bits (1417), Expect = e-157
Identities = 269/286 (94%), Positives = 275/286 (96%)
Frame = +1
Query: 76 MAQKENTYPWPYGRQTAQSGLNILPQRVLRKEAVTPSALVLMSRSNTQPTAAPGQKVVEN 255
MAQKEN+YPWPYGRQTA SGL+ LPQRVLRKE VTPSALVLMSRSN QPTAAPGQKV+EN
Sbjct: 1 MAQKENSYPWPYGRQTAPSGLSTLPQRVLRKEPVTPSALVLMSRSNVQPTAAPGQKVMEN 60
Query: 256 SSGTPNFSTRSFTIDDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEH 435
SSGTP+ TR FTIDDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEH
Sbjct: 61 SSGTPDILTRHFTIDDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEH 120
Query: 436 QLRREIEIQAHLQHPNILRLYNYFYDRRRIYLILEYAPRGELYKELQKCRTFDEQRTATI 615
QLRREIEIQAHL HPNILRLYNYFYDRRRIYLILEYAPRGELYKELQK TFDEQRTATI
Sbjct: 121 QLRREIEIQAHLHHPNILRLYNYFYDRRRIYLILEYAPRGELYKELQKSCTFDEQRTATI 180
Query: 616 MEELADALIYCHGKKVIHRDIKPENLLLGLQGELKIADFGWSVHAPSLRRKTMCGTLDYL 795
MEELADAL+YCHGKKVIHRDIKPENLLLGL+GELKIADFGWSVHAPSLRRKTMCGTLDYL
Sbjct: 181 MEELADALMYCHGKKVIHRDIKPENLLLGLKGELKIADFGWSVHAPSLRRKTMCGTLDYL 240
Query: 796 PPEMIEGRTHNEKVDLWCIGVLCYELLVGNPPFESASHNETYRRIV 933
PPEMIEGR HNEKVDLWCIGVLCYELLVGNPPFESASHNETYRRIV
Sbjct: 241 PPEMIEGRMHNEKVDLWCIGVLCYELLVGNPPFESASHNETYRRIV 286
>ref|NP_001015878.1| serine/threonine-protein kinase 13 isoform 1 [Homo sapiens].
Length = 309
Score = 402 bits (1032), Expect = e-112
Identities = 197/252 (78%), Positives = 218/252 (86%)
Frame = +1
Query: 178 TPSALVLMSRSNTQPTAAPGQKVVENSSGTPNFSTRSFTIDDFEIGRPLGKGKFGNVYLA 357
+P A+V + ++ QP + + + + R T+DDFEIGRPLGKGKFGNVYLA
Sbjct: 3 SPRAVVQLGKA--QPAGEELATANQTAQQPSSPAMRRLTVDDFEIGRPLGKGKFGNVYLA 60
Query: 358 REKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLQHPNILRLYNYFYDRRRIYLIL 537
R K+SHFIVALKVLFKSQIEKEG+EHQLRREIEIQAHLQHPNILRLYNYF+D RR+YLIL
Sbjct: 61 RLKESHFIVALKVLFKSQIEKEGLEHQLRREIEIQAHLQHPNILRLYNYFHDARRVYLIL 120
Query: 538 EYAPRGELYKELQKCRTFDEQRTATIMEELADALIYCHGKKVIHRDIKPENLLLGLQGEL 717
EYAPRGELYKELQK DEQRTATI+EELADAL YCH KKVIHRDIKPENLLLG +GE+
Sbjct: 121 EYAPRGELYKELQKSEKLDEQRTATIIEELADALTYCHDKKVIHRDIKPENLLLGFRGEV 180
Query: 718 KIADFGWSVHAPSLRRKTMCGTLDYLPPEMIEGRTHNEKVDLWCIGVLCYELLVGNPPFE 897
KIADFGWSVH PSLRRKTMCGTLDYLPPEMIEGRT++EKVDLWCIGVLCYELLVG PPFE
Sbjct: 181 KIADFGWSVHTPSLRRKTMCGTLDYLPPEMIEGRTYDEKVDLWCIGVLCYELLVGYPPFE 240
Query: 898 SASHNETYRRIV 933
SASH+ETYRRI+
Sbjct: 241 SASHSETYRRIL 252
>ref|NP_003151.2| serine/threonine-protein kinase 13 isoform 3 [Homo sapiens].
Length = 275
Score = 400 bits (1029), Expect = e-112
Identities = 192/217 (88%), Positives = 204/217 (94%)
Frame = +1
Query: 283 RSFTIDDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQ 462
R T+DDFEIGRPLGKGKFGNVYLAR K+SHFIVALKVLFKSQIEKEG+EHQLRREIEIQ
Sbjct: 2 RRLTVDDFEIGRPLGKGKFGNVYLARLKESHFIVALKVLFKSQIEKEGLEHQLRREIEIQ 61
Query: 463 AHLQHPNILRLYNYFYDRRRIYLILEYAPRGELYKELQKCRTFDEQRTATIMEELADALI 642
AHLQHPNILRLYNYF+D RR+YLILEYAPRGELYKELQK DEQRTATI+EELADAL
Sbjct: 62 AHLQHPNILRLYNYFHDARRVYLILEYAPRGELYKELQKSEKLDEQRTATIIEELADALT 121
Query: 643 YCHGKKVIHRDIKPENLLLGLQGELKIADFGWSVHAPSLRRKTMCGTLDYLPPEMIEGRT 822
YCH KKVIHRDIKPENLLLG +GE+KIADFGWSVH PSLRRKTMCGTLDYLPPEMIEGRT
Sbjct: 122 YCHDKKVIHRDIKPENLLLGFRGEVKIADFGWSVHTPSLRRKTMCGTLDYLPPEMIEGRT 181
Query: 823 HNEKVDLWCIGVLCYELLVGNPPFESASHNETYRRIV 933
++EKVDLWCIGVLCYELLVG PPFESASH+ETYRRI+
Sbjct: 182 YDEKVDLWCIGVLCYELLVGYPPFESASHSETYRRIL 218
>ref|NP_001015879.1| serine/threonine-protein kinase 13 isoform 2 [Homo sapiens].
Length = 290
Score = 400 bits (1029), Expect = e-112
Identities = 192/217 (88%), Positives = 204/217 (94%)
Frame = +1
Query: 283 RSFTIDDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQ 462
R T+DDFEIGRPLGKGKFGNVYLAR K+SHFIVALKVLFKSQIEKEG+EHQLRREIEIQ
Sbjct: 17 RRLTVDDFEIGRPLGKGKFGNVYLARLKESHFIVALKVLFKSQIEKEGLEHQLRREIEIQ 76
Query: 463 AHLQHPNILRLYNYFYDRRRIYLILEYAPRGELYKELQKCRTFDEQRTATIMEELADALI 642
AHLQHPNILRLYNYF+D RR+YLILEYAPRGELYKELQK DEQRTATI+EELADAL
Sbjct: 77 AHLQHPNILRLYNYFHDARRVYLILEYAPRGELYKELQKSEKLDEQRTATIIEELADALT 136
Query: 643 YCHGKKVIHRDIKPENLLLGLQGELKIADFGWSVHAPSLRRKTMCGTLDYLPPEMIEGRT 822
YCH KKVIHRDIKPENLLLG +GE+KIADFGWSVH PSLRRKTMCGTLDYLPPEMIEGRT
Sbjct: 137 YCHDKKVIHRDIKPENLLLGFRGEVKIADFGWSVHTPSLRRKTMCGTLDYLPPEMIEGRT 196
Query: 823 HNEKVDLWCIGVLCYELLVGNPPFESASHNETYRRIV 933
++EKVDLWCIGVLCYELLVG PPFESASH+ETYRRI+
Sbjct: 197 YDEKVDLWCIGVLCYELLVGYPPFESASHSETYRRIL 233
>ref|NP_940835.1| serine/threonine-protein kinase 6 [Homo sapiens].
Length = 403
Score = 354 bits (909), Expect = 6e-98
Identities = 172/249 (69%), Positives = 199/249 (79%), Gaps = 8/249 (3%)
Frame = +1
Query: 208 SNTQPTAAPGQKVVENS--------SGTPNFSTRSFTIDDFEIGRPLGKGKFGNVYLARE 363
+NTQ + P EN+ R + ++DFEIGRPLGKGKFGNVYLARE
Sbjct: 93 NNTQKSKQPLPSAPENNPEEELASKQKNEESKKRQWALEDFEIGRPLGKGKFGNVYLARE 152
Query: 364 KKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLQHPNILRLYNYFYDRRRIYLILEY 543
K+S FI+ALKVLFK+Q+EK GVEHQLRRE+EIQ+HL+HPNILRLY YF+D R+YLILEY
Sbjct: 153 KQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEY 212
Query: 544 APRGELYKELQKCRTFDEQRTATIMEELADALIYCHGKKVIHRDIKPENLLLGLQGELKI 723
AP G +Y+ELQK FDEQRTAT + ELA+AL YCH K+VIHRDIKPENLLLG GELKI
Sbjct: 213 APLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKI 272
Query: 724 ADFGWSVHAPSLRRKTMCGTLDYLPPEMIEGRTHNEKVDLWCIGVLCYELLVGNPPFESA 903
ADFGWSVHAPS RR T+CGTLDYLPPEMIEGR H+EKVDLW +GVLCYE LVG PPFE+
Sbjct: 273 ADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 332
Query: 904 SHNETYRRI 930
++ ETY+RI
Sbjct: 333 TYQETYKRI 341
>ref|NP_940839.1| serine/threonine-protein kinase 6 [Homo sapiens].
Length = 403
Score = 354 bits (909), Expect = 6e-98
Identities = 172/249 (69%), Positives = 199/249 (79%), Gaps = 8/249 (3%)
Frame = +1
Query: 208 SNTQPTAAPGQKVVENS--------SGTPNFSTRSFTIDDFEIGRPLGKGKFGNVYLARE 363
+NTQ + P EN+ R + ++DFEIGRPLGKGKFGNVYLARE
Sbjct: 93 NNTQKSKQPLPSAPENNPEEELASKQKNEESKKRQWALEDFEIGRPLGKGKFGNVYLARE 152
Query: 364 KKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLQHPNILRLYNYFYDRRRIYLILEY 543
K+S FI+ALKVLFK+Q+EK GVEHQLRRE+EIQ+HL+HPNILRLY YF+D R+YLILEY
Sbjct: 153 KQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEY 212
Query: 544 APRGELYKELQKCRTFDEQRTATIMEELADALIYCHGKKVIHRDIKPENLLLGLQGELKI 723
AP G +Y+ELQK FDEQRTAT + ELA+AL YCH K+VIHRDIKPENLLLG GELKI
Sbjct: 213 APLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKI 272
Query: 724 ADFGWSVHAPSLRRKTMCGTLDYLPPEMIEGRTHNEKVDLWCIGVLCYELLVGNPPFESA 903
ADFGWSVHAPS RR T+CGTLDYLPPEMIEGR H+EKVDLW +GVLCYE LVG PPFE+
Sbjct: 273 ADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 332
Query: 904 SHNETYRRI 930
++ ETY+RI
Sbjct: 333 TYQETYKRI 341
>ref|NP_940838.1| serine/threonine-protein kinase 6 [Homo sapiens].
Length = 403
Score = 354 bits (909), Expect = 6e-98
Identities = 172/249 (69%), Positives = 199/249 (79%), Gaps = 8/249 (3%)
Frame = +1
Query: 208 SNTQPTAAPGQKVVENS--------SGTPNFSTRSFTIDDFEIGRPLGKGKFGNVYLARE 363
+NTQ + P EN+ R + ++DFEIGRPLGKGKFGNVYLARE
Sbjct: 93 NNTQKSKQPLPSAPENNPEEELASKQKNEESKKRQWALEDFEIGRPLGKGKFGNVYLARE 152
Query: 364 KKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLQHPNILRLYNYFYDRRRIYLILEY 543
K+S FI+ALKVLFK+Q+EK GVEHQLRRE+EIQ+HL+HPNILRLY YF+D R+YLILEY
Sbjct: 153 KQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEY 212
Query: 544 APRGELYKELQKCRTFDEQRTATIMEELADALIYCHGKKVIHRDIKPENLLLGLQGELKI 723
AP G +Y+ELQK FDEQRTAT + ELA+AL YCH K+VIHRDIKPENLLLG GELKI
Sbjct: 213 APLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKI 272
Query: 724 ADFGWSVHAPSLRRKTMCGTLDYLPPEMIEGRTHNEKVDLWCIGVLCYELLVGNPPFESA 903
ADFGWSVHAPS RR T+CGTLDYLPPEMIEGR H+EKVDLW +GVLCYE LVG PPFE+
Sbjct: 273 ADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 332
Query: 904 SHNETYRRI 930
++ ETY+RI
Sbjct: 333 TYQETYKRI 341
>ref|NP_940837.1| serine/threonine-protein kinase 6 [Homo sapiens].
Length = 403
Score = 354 bits (909), Expect = 6e-98
Identities = 172/249 (69%), Positives = 199/249 (79%), Gaps = 8/249 (3%)
Frame = +1
Query: 208 SNTQPTAAPGQKVVENS--------SGTPNFSTRSFTIDDFEIGRPLGKGKFGNVYLARE 363
+NTQ + P EN+ R + ++DFEIGRPLGKGKFGNVYLARE
Sbjct: 93 NNTQKSKQPLPSAPENNPEEELASKQKNEESKKRQWALEDFEIGRPLGKGKFGNVYLARE 152
Query: 364 KKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLQHPNILRLYNYFYDRRRIYLILEY 543
K+S FI+ALKVLFK+Q+EK GVEHQLRRE+EIQ+HL+HPNILRLY YF+D R+YLILEY
Sbjct: 153 KQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEY 212
Query: 544 APRGELYKELQKCRTFDEQRTATIMEELADALIYCHGKKVIHRDIKPENLLLGLQGELKI 723
AP G +Y+ELQK FDEQRTAT + ELA+AL YCH K+VIHRDIKPENLLLG GELKI
Sbjct: 213 APLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKI 272
Query: 724 ADFGWSVHAPSLRRKTMCGTLDYLPPEMIEGRTHNEKVDLWCIGVLCYELLVGNPPFESA 903
ADFGWSVHAPS RR T+CGTLDYLPPEMIEGR H+EKVDLW +GVLCYE LVG PPFE+
Sbjct: 273 ADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 332
Query: 904 SHNETYRRI 930
++ ETY+RI
Sbjct: 333 TYQETYKRI 341
>ref|NP_940836.1| serine/threonine-protein kinase 6 [Homo sapiens].
Length = 403
Score = 354 bits (909), Expect = 6e-98
Identities = 172/249 (69%), Positives = 199/249 (79%), Gaps = 8/249 (3%)
Frame = +1
Query: 208 SNTQPTAAPGQKVVENS--------SGTPNFSTRSFTIDDFEIGRPLGKGKFGNVYLARE 363
+NTQ + P EN+ R + ++DFEIGRPLGKGKFGNVYLARE
Sbjct: 93 NNTQKSKQPLPSAPENNPEEELASKQKNEESKKRQWALEDFEIGRPLGKGKFGNVYLARE 152
Query: 364 KKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLQHPNILRLYNYFYDRRRIYLILEY 543
K+S FI+ALKVLFK+Q+EK GVEHQLRRE+EIQ+HL+HPNILRLY YF+D R+YLILEY
Sbjct: 153 KQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEY 212
Query: 544 APRGELYKELQKCRTFDEQRTATIMEELADALIYCHGKKVIHRDIKPENLLLGLQGELKI 723
AP G +Y+ELQK FDEQRTAT + ELA+AL YCH K+VIHRDIKPENLLLG GELKI
Sbjct: 213 APLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKI 272
Query: 724 ADFGWSVHAPSLRRKTMCGTLDYLPPEMIEGRTHNEKVDLWCIGVLCYELLVGNPPFESA 903
ADFGWSVHAPS RR T+CGTLDYLPPEMIEGR H+EKVDLW +GVLCYE LVG PPFE+
Sbjct: 273 ADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 332
Query: 904 SHNETYRRI 930
++ ETY+RI
Sbjct: 333 TYQETYKRI 341
>ref|NP_003591.2| serine/threonine-protein kinase 6 [Homo sapiens].
Length = 403
Score = 354 bits (909), Expect = 6e-98
Identities = 172/249 (69%), Positives = 199/249 (79%), Gaps = 8/249 (3%)
Frame = +1
Query: 208 SNTQPTAAPGQKVVENS--------SGTPNFSTRSFTIDDFEIGRPLGKGKFGNVYLARE 363
+NTQ + P EN+ R + ++DFEIGRPLGKGKFGNVYLARE
Sbjct: 93 NNTQKSKQPLPSAPENNPEEELASKQKNEESKKRQWALEDFEIGRPLGKGKFGNVYLARE 152
Query: 364 KKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLQHPNILRLYNYFYDRRRIYLILEY 543
K+S FI+ALKVLFK+Q+EK GVEHQLRRE+EIQ+HL+HPNILRLY YF+D R+YLILEY
Sbjct: 153 KQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEY 212
Query: 544 APRGELYKELQKCRTFDEQRTATIMEELADALIYCHGKKVIHRDIKPENLLLGLQGELKI 723
AP G +Y+ELQK FDEQRTAT + ELA+AL YCH K+VIHRDIKPENLLLG GELKI
Sbjct: 213 APLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKI 272
Query: 724 ADFGWSVHAPSLRRKTMCGTLDYLPPEMIEGRTHNEKVDLWCIGVLCYELLVGNPPFESA 903
ADFGWSVHAPS RR T+CGTLDYLPPEMIEGR H+EKVDLW +GVLCYE LVG PPFE+
Sbjct: 273 ADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 332
Query: 904 SHNETYRRI 930
++ ETY+RI
Sbjct: 333 TYQETYKRI 341
Database: RefSeq49_HP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,297,164
Number of sequences in database: 32,964
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 32964
Number of Hits to DB: 44,748,169
Number of extensions: 1417565
Number of successful extensions: 7704
Number of sequences better than 1.0e-05: 812
Number of HSP's gapped: 6245
Number of HSP's successfully gapped: 833
Length of query: 311
Length of database: 18,297,164
Length adjustment: 102
Effective length of query: 209
Effective length of database: 14,934,836
Effective search space: 3121380724
Effective search space used: 3121380724
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)
BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-013490
(934 letters)
Database: Sscrofa_10.2.fasta
4582 sequences; 2,808,509,378 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Sscrofa_Chr12 383 e-103
>Sscrofa_Chr12
|| Length = 63588571
Score = 383 bits (193), Expect = e-103
Identities = 193/193 (100%)
Strand = Plus / Minus
Query: 282 gcgttccttcaccatcgatgactttgagattgggcggcctctgggcaaaggcaagtttgg 341
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 55888417 gcgttccttcaccatcgatgactttgagattgggcggcctctgggcaaaggcaagtttgg 55888358
Query: 342 aaatgtgtacttggctcgagagaagaaaagccatttcatcgtggcgctcaaagtcctctt 401
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 55888357 aaatgtgtacttggctcgagagaagaaaagccatttcatcgtggcgctcaaagtcctctt 55888298
Query: 402 caagtctcagatagagaaggagggcgtggagcaccagctgcgcagagagatcgaaatcca 461
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 55888297 caagtctcagatagagaaggagggcgtggagcaccagctgcgcagagagatcgaaatcca 55888238
Query: 462 ggcccatctgcag 474
|||||||||||||
Sbjct: 55888237 ggcccatctgcag 55888225
Score = 339 bits (171), Expect = 2e-90
Identities = 174/175 (99%)
Strand = Plus / Minus
Query: 760 aggaggaagaccatgtgtggcaccctggactacctgcccccagagatgatagaggggcgc 819
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 55886707 aggaggaagaccatgtgtggcaccctggactacttgcccccagagatgatagaggggcgc 55886648
Query: 820 acacacaacgagaaggtggatctgtggtgcatcggagtcctctgctatgagctgttggtg 879
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 55886647 acacacaacgagaaggtggatctgtggtgcatcggagtcctctgctatgagctgttggtg 55886588
Query: 880 ggaaacccgcccttcgagagtgcttcccacaacgagacctaccgtcgcatcgtaa 934
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 55886587 ggaaacccgcccttcgagagtgcttcccacaacgagacctaccgtcgcatcgtaa 55886533
Score = 299 bits (151), Expect = 1e-78
Identities = 151/151 (100%)
Strand = Plus / Minus
Query: 612 gatcatggaggagctggcagacgctctgatatactgccatgggaagaaggtgattcacag 671
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 55887695 gatcatggaggagctggcagacgctctgatatactgccatgggaagaaggtgattcacag 55887636
Query: 672 agacataaagccagagaatctgctcttggggctccagggagagctgaagattgccgactt 731
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 55887635 agacataaagccagagaatctgctcttggggctccagggagagctgaagattgccgactt 55887576
Query: 732 cggctggtctgtgcacgccccctcacttagg 762
|||||||||||||||||||||||||||||||
Sbjct: 55887575 cggctggtctgtgcacgccccctcacttagg 55887545
Score = 276 bits (139), Expect = 2e-71
Identities = 139/139 (100%)
Strand = Plus / Minus
Query: 474 gcatccaaacatcttgcgtctctacaactatttctatgaccggagaaggatctacttgat 533
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 55887946 gcatccaaacatcttgcgtctctacaactatttctatgaccggagaaggatctacttgat 55887887
Query: 534 tctggagtatgccccccggggggagctctacaaggaactgcagaaatgccgcacttttga 593
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 55887886 tctggagtatgccccccggggggagctctacaaggaactgcagaaatgccgcacttttga 55887827
Query: 594 cgagcagcgaacagccacg 612
|||||||||||||||||||
Sbjct: 55887826 cgagcagcgaacagccacg 55887808
Score = 206 bits (104), Expect = 2e-50
Identities = 104/104 (100%)
Strand = Plus / Minus
Query: 123 ggctcagtctggtctgaacatcctgccccagagagtccttcggaaggaggctgtcacccc 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 55889164 ggctcagtctggtctgaacatcctgccccagagagtccttcggaaggaggctgtcacccc 55889105
Query: 183 atcagcgcttgtcctcatgagccgctccaatacccagcccacag 226
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 55889104 atcagcgcttgtcctcatgagccgctccaatacccagcccacag 55889061
Score = 151 bits (76), Expect = 8e-34
Identities = 76/76 (100%)
Strand = Plus / Minus
Query: 49 cagttccctccccctttccctctaaggatggcccagaaggagaacacctacccctggccc 108
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 55890690 cagttccctccccctttccctctaaggatggcccagaaggagaacacctacccctggccc 55890631
Query: 109 tacggtcggcagacgg 124
||||||||||||||||
Sbjct: 55890630 tacggtcggcagacgg 55890615
Score = 115 bits (58), Expect = 4e-23
Identities = 58/58 (100%)
Strand = Plus / Minus
Query: 225 agctgcccctggccagaaggtggtggagaacagcagtgggacccccaacttctcaacg 282
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 55888955 agctgcccctggccagaaggtggtggagaacagcagtgggacccccaacttctcaacg 55888898
Score = 101 bits (51), Expect = 7e-19
Identities = 51/51 (100%)
Strand = Plus / Minus
Query: 1 ggttcagtcgtttgccagctgccaggggggtggctgtgccaccggtttcag 51
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 55891050 ggttcagtcgtttgccagctgccaggggggtggctgtgccaccggtttcag 55891000
Database: Sscrofa_10.2.fasta
Posted date: Nov 16, 2011 10:34 AM
Number of letters in database: 2,808,509,378
Number of sequences in database: 4582
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4582
Number of Hits to DB: 26,124,759
Number of extensions: 178
Number of successful extensions: 178
Number of sequences better than 1.0e-05: 1
Number of HSP's gapped: 178
Number of HSP's successfully gapped: 8
Length of query: 934
Length of database: 2,808,509,378
Length adjustment: 21
Effective length of query: 913
Effective length of database: 2,808,413,156
Effective search space: 2564081211428
Effective search space used: 2564081211428
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 18 (36.2 bits)
S2: 29 (58.0 bits)