Search to RefSeqCP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-013552
(908 letters)
Database: RefSeq49_CP.fasta
33,336 sequences; 18,874,504 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_536396.1| PREDICTED: similar to adenosine kinase isoform ... 500 e-142
Alignment gi|XP_864004.1| PREDICTED: similar to adenosine kinase isoform ... 457 e-129
Alignment gi|XP_863969.1| PREDICTED: similar to adenosine kinase isoform ... 90 3e-18
>ref|XP_536396.1| PREDICTED: similar to adenosine kinase isoform b isoform 1 [Canis
familiaris].
Length = 362
Score = 500 bits (1287), Expect = e-142
Identities = 248/267 (92%), Positives = 257/267 (96%)
Frame = +1
Query: 91 RTLSENILFGMGNPLLDISAVVDKDFLDKYSLKPNDQILAEDKHKELFDELVKKFKVEYH 270
R LSENILFGMGNPLLDI+AVVDKDFLDKYSLKPNDQILAEDKHKELFDELVKKFKVEYH
Sbjct: 19 RALSENILFGMGNPLLDITAVVDKDFLDKYSLKPNDQILAEDKHKELFDELVKKFKVEYH 78
Query: 271 AGGSTQNSIKVAQWMIQQPHKAATFFGCIGIDKFGEILKKKAAEAHVDAHYYEQNEQPTG 450
AGGSTQNSIKVAQWMIQQP+KAATFFGCIG D FGEILKKKAAEAHVDAHYYEQNEQ TG
Sbjct: 79 AGGSTQNSIKVAQWMIQQPYKAATFFGCIGTDTFGEILKKKAAEAHVDAHYYEQNEQTTG 138
Query: 451 TCAACITGGNRSLVANLAAANCYKKEKHLDMEKNWTLVDKARVYYIAGFFLTVSPESVLK 630
TCA CITG NRSLVANLAAANCYKKEKHLDM+KNWTLV+KARVYYIAGFFLTVSPESVLK
Sbjct: 139 TCAVCITGSNRSLVANLAAANCYKKEKHLDMDKNWTLVEKARVYYIAGFFLTVSPESVLK 198
Query: 631 VAHHASENNRIFTLNLSAPFISQFYKESLMKVMPYVDILFGNETEAATFAREQGFETEDI 810
VA+HASENNRIFTLNLSAPFISQFYKESLMKVMPY+DILFGNETEAATFAREQGFETEDI
Sbjct: 199 VANHASENNRIFTLNLSAPFISQFYKESLMKVMPYIDILFGNETEAATFAREQGFETEDI 258
Query: 811 KEIAKKTQALPKVNFERQRIVISPRER 891
KEIA+KTQALPKVN +RQRIVI + R
Sbjct: 259 KEIARKTQALPKVNQKRQRIVIFTQGR 285
>ref|XP_864004.1| PREDICTED: similar to adenosine kinase isoform b isoform 3 [Canis
familiaris].
Length = 256
Score = 457 bits (1176), Expect = e-129
Identities = 224/236 (94%), Positives = 230/236 (97%)
Frame = +1
Query: 91 RTLSENILFGMGNPLLDISAVVDKDFLDKYSLKPNDQILAEDKHKELFDELVKKFKVEYH 270
R LSENILFGMGNPLLDI+AVVDKDFLDKYSLKPNDQILAEDKHKELFDELVKKFKVEYH
Sbjct: 19 RALSENILFGMGNPLLDITAVVDKDFLDKYSLKPNDQILAEDKHKELFDELVKKFKVEYH 78
Query: 271 AGGSTQNSIKVAQWMIQQPHKAATFFGCIGIDKFGEILKKKAAEAHVDAHYYEQNEQPTG 450
AGGSTQNSIKVAQWMIQQP+KAATFFGCIG D FGEILKKKAAEAHVDAHYYEQNEQ TG
Sbjct: 79 AGGSTQNSIKVAQWMIQQPYKAATFFGCIGTDTFGEILKKKAAEAHVDAHYYEQNEQTTG 138
Query: 451 TCAACITGGNRSLVANLAAANCYKKEKHLDMEKNWTLVDKARVYYIAGFFLTVSPESVLK 630
TCA CITG NRSLVANLAAANCYKKEKHLDM+KNWTLV+KARVYYIAGFFLTVSPESVLK
Sbjct: 139 TCAVCITGSNRSLVANLAAANCYKKEKHLDMDKNWTLVEKARVYYIAGFFLTVSPESVLK 198
Query: 631 VAHHASENNRIFTLNLSAPFISQFYKESLMKVMPYVDILFGNETEAATFAREQGFE 798
VA+HASENNRIFTLNLSAPFISQFYKESLMKVMPY+DILFGNETEAATFAREQGFE
Sbjct: 199 VANHASENNRIFTLNLSAPFISQFYKESLMKVMPYIDILFGNETEAATFAREQGFE 254
>ref|XP_863969.1| PREDICTED: similar to adenosine kinase isoform 2 [Canis
familiaris].
Length = 80
Score = 90.1 bits (222), Expect = 3e-18
Identities = 43/44 (97%), Positives = 44/44 (100%)
Frame = +1
Query: 100 SENILFGMGNPLLDISAVVDKDFLDKYSLKPNDQILAEDKHKEL 231
SENILFGMGNPLLDI+AVVDKDFLDKYSLKPNDQILAEDKHKEL
Sbjct: 32 SENILFGMGNPLLDITAVVDKDFLDKYSLKPNDQILAEDKHKEL 75
Database: RefSeq49_CP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,874,504
Number of sequences in database: 33,336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33336
Number of Hits to DB: 29,781,382
Number of extensions: 657313
Number of successful extensions: 1526
Number of sequences better than 1.0e-05: 3
Number of HSP's gapped: 1526
Number of HSP's successfully gapped: 3
Length of query: 302
Length of database: 18,874,504
Length adjustment: 102
Effective length of query: 200
Effective length of database: 15,474,232
Effective search space: 3094846400
Effective search space used: 3094846400
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)
Animal-Genome cDNA 20110601C-013552
Search to RefSeqBP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-013552
(908 letters)
Database: RefSeq49_BP.fasta
33,088 sequences; 17,681,374 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001069534.1| adenosine kinase [Bos taurus]. 506 e-144
>ref|NP_001069534.1| adenosine kinase [Bos taurus].
Length = 345
Score = 506 bits (1304), Expect = e-144
Identities = 251/265 (94%), Positives = 257/265 (96%)
Frame = +1
Query: 97 LSENILFGMGNPLLDISAVVDKDFLDKYSLKPNDQILAEDKHKELFDELVKKFKVEYHAG 276
+SENILFGMGNPLLDISAVVDKDFLDKYSLKPNDQILAE+KHKELFDELVKKFKVEYHAG
Sbjct: 4 ISENILFGMGNPLLDISAVVDKDFLDKYSLKPNDQILAEEKHKELFDELVKKFKVEYHAG 63
Query: 277 GSTQNSIKVAQWMIQQPHKAATFFGCIGIDKFGEILKKKAAEAHVDAHYYEQNEQPTGTC 456
GSTQNSIKVAQWMIQQPHKAATFFGCIGIDKFGEILKKKAAEAHVDAHYYEQNEQPTGTC
Sbjct: 64 GSTQNSIKVAQWMIQQPHKAATFFGCIGIDKFGEILKKKAAEAHVDAHYYEQNEQPTGTC 123
Query: 457 AACITGGNRSLVANLAAANCYKKEKHLDMEKNWTLVDKARVYYIAGFFLTVSPESVLKVA 636
AACITGGNRSLVANLAAANCYKKEKHLDMEKNW LVDKARVYYIAGFFLT SPESVLKVA
Sbjct: 124 AACITGGNRSLVANLAAANCYKKEKHLDMEKNWMLVDKARVYYIAGFFLTFSPESVLKVA 183
Query: 637 HHASENNRIFTLNLSAPFISQFYKESLMKVMPYVDILFGNETEAATFAREQGFETEDIKE 816
HHASENNRIFTLNLSAPFISQFYKESLMKVMP+VDILFGNE EAA FAREQGFETEDIKE
Sbjct: 184 HHASENNRIFTLNLSAPFISQFYKESLMKVMPFVDILFGNEMEAAAFAREQGFETEDIKE 243
Query: 817 IAKKTQALPKVNFERQRIVISPRER 891
IA+KTQALPKVN +RQRIVI + R
Sbjct: 244 IARKTQALPKVNSKRQRIVIFTQGR 268
Database: RefSeq49_BP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 17,681,374
Number of sequences in database: 33,088
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33088
Number of Hits to DB: 28,569,635
Number of extensions: 639743
Number of successful extensions: 1434
Number of sequences better than 1.0e-05: 1
Number of HSP's gapped: 1434
Number of HSP's successfully gapped: 1
Length of query: 302
Length of database: 17,681,374
Length adjustment: 102
Effective length of query: 200
Effective length of database: 14,306,398
Effective search space: 2861279600
Effective search space used: 2861279600
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)
Search to RefSeqSP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-013552
(908 letters)
Database: RefSeq49_SP.fasta
24,897 sequences; 11,343,932 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_003359288.1| PREDICTED: adenosine kinase isoform 2 [Sus s... 524 e-149
Alignment gi|XP_003359289.1| PREDICTED: adenosine kinase isoform 3 [Sus s... 520 e-148
Alignment gi|XP_001925642.3| PREDICTED: adenosine kinase isoform 1 [Sus s... 472 e-133
Alignment gi|XP_003359290.1| PREDICTED: adenosine kinase isoform 4 [Sus s... 361 e-100
>ref|XP_003359288.1| PREDICTED: adenosine kinase isoform 2 [Sus scrofa].
Length = 362
Score = 524 bits (1349), Expect = e-149
Identities = 261/267 (97%), Positives = 263/267 (98%)
Frame = +1
Query: 91 RTLSENILFGMGNPLLDISAVVDKDFLDKYSLKPNDQILAEDKHKELFDELVKKFKVEYH 270
RTLSENILFGMGNPLLDISAVVDKDFLDKYSLKPNDQILAEDKHKELFDELVKKFKVEYH
Sbjct: 19 RTLSENILFGMGNPLLDISAVVDKDFLDKYSLKPNDQILAEDKHKELFDELVKKFKVEYH 78
Query: 271 AGGSTQNSIKVAQWMIQQPHKAATFFGCIGIDKFGEILKKKAAEAHVDAHYYEQNEQPTG 450
AGGSTQNSIKVAQWMIQQPHKAATFFGCIGIDKFGEILKKKAAEAHVDAHYYEQNEQPTG
Sbjct: 79 AGGSTQNSIKVAQWMIQQPHKAATFFGCIGIDKFGEILKKKAAEAHVDAHYYEQNEQPTG 138
Query: 451 TCAACITGGNRSLVANLAAANCYKKEKHLDMEKNWTLVDKARVYYIAGFFLTVSPESVLK 630
TCAACITGGNRSLVANLAAANCYKKEKHLDMEKNWTLVDKARVYYIAGFFLTVSPESVLK
Sbjct: 139 TCAACITGGNRSLVANLAAANCYKKEKHLDMEKNWTLVDKARVYYIAGFFLTVSPESVLK 198
Query: 631 VAHHASENNRIFTLNLSAPFISQFYKESLMKVMPYVDILFGNETEAATFAREQGFETEDI 810
VAHHASENNRIFTLNLSAPFISQFYKESLMKVMPYVDILFGNETEAATFAREQGFETEDI
Sbjct: 199 VAHHASENNRIFTLNLSAPFISQFYKESLMKVMPYVDILFGNETEAATFAREQGFETEDI 258
Query: 811 KEIAKKTQALPKVNFERQRIVISPRER 891
KEIAKKTQALPKVN +RQRIVI + R
Sbjct: 259 KEIAKKTQALPKVNSKRQRIVIFTQGR 285
>ref|XP_003359289.1| PREDICTED: adenosine kinase isoform 3 [Sus scrofa].
Length = 345
Score = 520 bits (1338), Expect = e-148
Identities = 258/266 (96%), Positives = 262/266 (98%)
Frame = +1
Query: 94 TLSENILFGMGNPLLDISAVVDKDFLDKYSLKPNDQILAEDKHKELFDELVKKFKVEYHA 273
++SENILFGMGNPLLDISAVVDKDFLDKYSLKPNDQILAEDKHKELFDELVKKFKVEYHA
Sbjct: 3 SISENILFGMGNPLLDISAVVDKDFLDKYSLKPNDQILAEDKHKELFDELVKKFKVEYHA 62
Query: 274 GGSTQNSIKVAQWMIQQPHKAATFFGCIGIDKFGEILKKKAAEAHVDAHYYEQNEQPTGT 453
GGSTQNSIKVAQWMIQQPHKAATFFGCIGIDKFGEILKKKAAEAHVDAHYYEQNEQPTGT
Sbjct: 63 GGSTQNSIKVAQWMIQQPHKAATFFGCIGIDKFGEILKKKAAEAHVDAHYYEQNEQPTGT 122
Query: 454 CAACITGGNRSLVANLAAANCYKKEKHLDMEKNWTLVDKARVYYIAGFFLTVSPESVLKV 633
CAACITGGNRSLVANLAAANCYKKEKHLDMEKNWTLVDKARVYYIAGFFLTVSPESVLKV
Sbjct: 123 CAACITGGNRSLVANLAAANCYKKEKHLDMEKNWTLVDKARVYYIAGFFLTVSPESVLKV 182
Query: 634 AHHASENNRIFTLNLSAPFISQFYKESLMKVMPYVDILFGNETEAATFAREQGFETEDIK 813
AHHASENNRIFTLNLSAPFISQFYKESLMKVMPYVDILFGNETEAATFAREQGFETEDIK
Sbjct: 183 AHHASENNRIFTLNLSAPFISQFYKESLMKVMPYVDILFGNETEAATFAREQGFETEDIK 242
Query: 814 EIAKKTQALPKVNFERQRIVISPRER 891
EIAKKTQALPKVN +RQRIVI + R
Sbjct: 243 EIAKKTQALPKVNSKRQRIVIFTQGR 268
>ref|XP_001925642.3| PREDICTED: adenosine kinase isoform 1 [Sus scrofa].
Length = 327
Score = 472 bits (1215), Expect = e-133
Identities = 240/266 (90%), Positives = 244/266 (91%)
Frame = +1
Query: 94 TLSENILFGMGNPLLDISAVVDKDFLDKYSLKPNDQILAEDKHKELFDELVKKFKVEYHA 273
++SENILFGMGNPLLDISAVVDKDFLDK FDELVKKFKVEYHA
Sbjct: 3 SISENILFGMGNPLLDISAVVDKDFLDK------------------FDELVKKFKVEYHA 44
Query: 274 GGSTQNSIKVAQWMIQQPHKAATFFGCIGIDKFGEILKKKAAEAHVDAHYYEQNEQPTGT 453
GGSTQNSIKVAQWMIQQPHKAATFFGCIGIDKFGEILKKKAAEAHVDAHYYEQNEQPTGT
Sbjct: 45 GGSTQNSIKVAQWMIQQPHKAATFFGCIGIDKFGEILKKKAAEAHVDAHYYEQNEQPTGT 104
Query: 454 CAACITGGNRSLVANLAAANCYKKEKHLDMEKNWTLVDKARVYYIAGFFLTVSPESVLKV 633
CAACITGGNRSLVANLAAANCYKKEKHLDMEKNWTLVDKARVYYIAGFFLTVSPESVLKV
Sbjct: 105 CAACITGGNRSLVANLAAANCYKKEKHLDMEKNWTLVDKARVYYIAGFFLTVSPESVLKV 164
Query: 634 AHHASENNRIFTLNLSAPFISQFYKESLMKVMPYVDILFGNETEAATFAREQGFETEDIK 813
AHHASENNRIFTLNLSAPFISQFYKESLMKVMPYVDILFGNETEAATFAREQGFETEDIK
Sbjct: 165 AHHASENNRIFTLNLSAPFISQFYKESLMKVMPYVDILFGNETEAATFAREQGFETEDIK 224
Query: 814 EIAKKTQALPKVNFERQRIVISPRER 891
EIAKKTQALPKVN +RQRIVI + R
Sbjct: 225 EIAKKTQALPKVNSKRQRIVIFTQGR 250
>ref|XP_003359290.1| PREDICTED: adenosine kinase isoform 4 [Sus scrofa].
Length = 305
Score = 361 bits (926), Expect = e-100
Identities = 197/267 (73%), Positives = 200/267 (74%)
Frame = +1
Query: 91 RTLSENILFGMGNPLLDISAVVDKDFLDKYSLKPNDQILAEDKHKELFDELVKKFKVEYH 270
RTLSENILFGMGNPLLDISAVVDKDFLDKYSLKPNDQILAEDKHKELFDELVKKFKVEYH
Sbjct: 19 RTLSENILFGMGNPLLDISAVVDKDFLDKYSLKPNDQILAEDKHKELFDELVKKFKVEYH 78
Query: 271 AGGSTQNSIKVAQWMIQQPHKAATFFGCIGIDKFGEILKKKAAEAHVDAHYYEQNEQPTG 450
AGGSTQNSIKVAQWMIQQPHKAATFFGCIGIDKFGEILKKKAAEAHVDAHYYEQNEQPTG
Sbjct: 79 AGGSTQNSIKVAQWMIQQPHKAATFFGCIGIDKFGEILKKKAAEAHVDAHYYEQNEQPTG 138
Query: 451 TCAACITGGNRSLVANLAAANCYKKEKHLDMEKNWTLVDKARVYYIAGFFLTVSPESVLK 630
TCAACITGGNRSLVANLAAANCYKKEKHLDMEKNWTLVDKARVYYIA +
Sbjct: 139 TCAACITGGNRSLVANLAAANCYKKEKHLDMEKNWTLVDKARVYYIA------------E 186
Query: 631 VAHHASENNRIFTLNLSAPFISQFYKESLMKVMPYVDILFGNETEAATFAREQGFETEDI 810
A A E G ETE DI
Sbjct: 187 AATFAREQ--------------------------------GFETE-------------DI 201
Query: 811 KEIAKKTQALPKVNFERQRIVISPRER 891
KEIAKKTQALPKVN +RQRIVI + R
Sbjct: 202 KEIAKKTQALPKVNSKRQRIVIFTQGR 228
Database: RefSeq49_SP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 11,343,932
Number of sequences in database: 24,897
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 24897
Number of Hits to DB: 18,295,179
Number of extensions: 405537
Number of successful extensions: 987
Number of sequences better than 1.0e-05: 4
Number of HSP's gapped: 986
Number of HSP's successfully gapped: 5
Length of query: 302
Length of database: 11,343,932
Length adjustment: 98
Effective length of query: 204
Effective length of database: 8,904,026
Effective search space: 1816421304
Effective search space used: 1816421304
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 33 (17.3 bits)
Search to RefSeqMP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-013552
(908 letters)
Database: RefSeq49_MP.fasta
30,036 sequences; 15,617,559 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_598840.1| adenosine kinase isoform 1 [Mus musculus]. 491 e-139
Alignment gi|NP_001229970.1| adenosine kinase isoform 2 [Mus musculus]. 489 e-138
>ref|NP_598840.1| adenosine kinase isoform 1 [Mus musculus].
Length = 361
Score = 491 bits (1264), Expect = e-139
Identities = 239/267 (89%), Positives = 257/267 (96%)
Frame = +1
Query: 91 RTLSENILFGMGNPLLDISAVVDKDFLDKYSLKPNDQILAEDKHKELFDELVKKFKVEYH 270
+ LSEN+LFGMGNPLLDISAVVDKDFLDKYSLKPNDQILAEDKHKELFDELVKKFKVEYH
Sbjct: 18 QALSENVLFGMGNPLLDISAVVDKDFLDKYSLKPNDQILAEDKHKELFDELVKKFKVEYH 77
Query: 271 AGGSTQNSIKVAQWMIQQPHKAATFFGCIGIDKFGEILKKKAAEAHVDAHYYEQNEQPTG 450
AGGSTQNS+KVAQW+IQ+PHKAATFFGCIGIDKFGEILK+KAA+AHVDAHYYEQNEQPTG
Sbjct: 78 AGGSTQNSMKVAQWLIQEPHKAATFFGCIGIDKFGEILKRKAADAHVDAHYYEQNEQPTG 137
Query: 451 TCAACITGGNRSLVANLAAANCYKKEKHLDMEKNWTLVDKARVYYIAGFFLTVSPESVLK 630
TCAACITGGNRSLVANLAAANCYKKEKHLD+E+NW LV+KARVYYIAGFFLTVSPESVLK
Sbjct: 138 TCAACITGGNRSLVANLAAANCYKKEKHLDLERNWVLVEKARVYYIAGFFLTVSPESVLK 197
Query: 631 VAHHASENNRIFTLNLSAPFISQFYKESLMKVMPYVDILFGNETEAATFAREQGFETEDI 810
VA +A+ENNR+FTLNLSAPFISQF+KE+LM VMPYVDILFGNETEAATFAREQGFET+DI
Sbjct: 198 VARYAAENNRVFTLNLSAPFISQFFKEALMDVMPYVDILFGNETEAATFAREQGFETKDI 257
Query: 811 KEIAKKTQALPKVNFERQRIVISPRER 891
KEIAKK QALPKVN +RQR VI + R
Sbjct: 258 KEIAKKAQALPKVNSKRQRTVIFTQGR 284
>ref|NP_001229970.1| adenosine kinase isoform 2 [Mus musculus].
Length = 345
Score = 489 bits (1259), Expect = e-138
Identities = 238/264 (90%), Positives = 255/264 (96%)
Frame = +1
Query: 100 SENILFGMGNPLLDISAVVDKDFLDKYSLKPNDQILAEDKHKELFDELVKKFKVEYHAGG 279
SEN+LFGMGNPLLDISAVVDKDFLDKYSLKPNDQILAEDKHKELFDELVKKFKVEYHAGG
Sbjct: 5 SENVLFGMGNPLLDISAVVDKDFLDKYSLKPNDQILAEDKHKELFDELVKKFKVEYHAGG 64
Query: 280 STQNSIKVAQWMIQQPHKAATFFGCIGIDKFGEILKKKAAEAHVDAHYYEQNEQPTGTCA 459
STQNS+KVAQW+IQ+PHKAATFFGCIGIDKFGEILK+KAA+AHVDAHYYEQNEQPTGTCA
Sbjct: 65 STQNSMKVAQWLIQEPHKAATFFGCIGIDKFGEILKRKAADAHVDAHYYEQNEQPTGTCA 124
Query: 460 ACITGGNRSLVANLAAANCYKKEKHLDMEKNWTLVDKARVYYIAGFFLTVSPESVLKVAH 639
ACITGGNRSLVANLAAANCYKKEKHLD+E+NW LV+KARVYYIAGFFLTVSPESVLKVA
Sbjct: 125 ACITGGNRSLVANLAAANCYKKEKHLDLERNWVLVEKARVYYIAGFFLTVSPESVLKVAR 184
Query: 640 HASENNRIFTLNLSAPFISQFYKESLMKVMPYVDILFGNETEAATFAREQGFETEDIKEI 819
+A+ENNR+FTLNLSAPFISQF+KE+LM VMPYVDILFGNETEAATFAREQGFET+DIKEI
Sbjct: 185 YAAENNRVFTLNLSAPFISQFFKEALMDVMPYVDILFGNETEAATFAREQGFETKDIKEI 244
Query: 820 AKKTQALPKVNFERQRIVISPRER 891
AKK QALPKVN +RQR VI + R
Sbjct: 245 AKKAQALPKVNSKRQRTVIFTQGR 268
Database: RefSeq49_MP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 15,617,559
Number of sequences in database: 30,036
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 30036
Number of Hits to DB: 25,224,224
Number of extensions: 564853
Number of successful extensions: 1377
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 1377
Number of HSP's successfully gapped: 2
Length of query: 302
Length of database: 15,617,559
Length adjustment: 101
Effective length of query: 201
Effective length of database: 12,583,923
Effective search space: 2529368523
Effective search space used: 2529368523
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)
Search to RefSeqHP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-013552
(908 letters)
Database: RefSeq49_HP.fasta
32,964 sequences; 18,297,164 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_006712.2| adenosine kinase isoform b [Homo sapiens]. 503 e-143
Alignment gi|NP_001114.2| adenosine kinase isoform a [Homo sapiens]. 502 e-142
Alignment gi|NP_001189378.1| adenosine kinase isoform c [Homo sapiens]. 454 e-128
Alignment gi|NP_001189379.1| adenosine kinase isoform d [Homo sapiens]. 326 2e-89
>ref|NP_006712.2| adenosine kinase isoform b [Homo sapiens].
Length = 362
Score = 503 bits (1295), Expect = e-143
Identities = 249/267 (93%), Positives = 258/267 (96%)
Frame = +1
Query: 91 RTLSENILFGMGNPLLDISAVVDKDFLDKYSLKPNDQILAEDKHKELFDELVKKFKVEYH 270
+ L ENILFGMGNPLLDISAVVDKDFLDKYSLKPNDQILAEDKHKELFDELVKKFKVEYH
Sbjct: 19 QALRENILFGMGNPLLDISAVVDKDFLDKYSLKPNDQILAEDKHKELFDELVKKFKVEYH 78
Query: 271 AGGSTQNSIKVAQWMIQQPHKAATFFGCIGIDKFGEILKKKAAEAHVDAHYYEQNEQPTG 450
AGGSTQNSIKVAQWMIQQPHKAATFFGCIGIDKFGEILK+KAAEAHVDAHYYEQNEQPTG
Sbjct: 79 AGGSTQNSIKVAQWMIQQPHKAATFFGCIGIDKFGEILKRKAAEAHVDAHYYEQNEQPTG 138
Query: 451 TCAACITGGNRSLVANLAAANCYKKEKHLDMEKNWTLVDKARVYYIAGFFLTVSPESVLK 630
TCAACITG NRSL+ANLAAANCYKKEKHLD+EKNW LV+KARV YIAGFFLTVSPESVLK
Sbjct: 139 TCAACITGDNRSLIANLAAANCYKKEKHLDLEKNWMLVEKARVCYIAGFFLTVSPESVLK 198
Query: 631 VAHHASENNRIFTLNLSAPFISQFYKESLMKVMPYVDILFGNETEAATFAREQGFETEDI 810
VAHHASENNRIFTLNLSAPFISQFYKESLMKVMPYVDILFGNETEAATFAREQGFET+DI
Sbjct: 199 VAHHASENNRIFTLNLSAPFISQFYKESLMKVMPYVDILFGNETEAATFAREQGFETKDI 258
Query: 811 KEIAKKTQALPKVNFERQRIVISPRER 891
KEIAKKTQALPK+N +RQRIVI + R
Sbjct: 259 KEIAKKTQALPKMNSKRQRIVIFTQGR 285
>ref|NP_001114.2| adenosine kinase isoform a [Homo sapiens].
Length = 345
Score = 502 bits (1292), Expect = e-142
Identities = 248/266 (93%), Positives = 258/266 (96%)
Frame = +1
Query: 94 TLSENILFGMGNPLLDISAVVDKDFLDKYSLKPNDQILAEDKHKELFDELVKKFKVEYHA 273
++ ENILFGMGNPLLDISAVVDKDFLDKYSLKPNDQILAEDKHKELFDELVKKFKVEYHA
Sbjct: 3 SVRENILFGMGNPLLDISAVVDKDFLDKYSLKPNDQILAEDKHKELFDELVKKFKVEYHA 62
Query: 274 GGSTQNSIKVAQWMIQQPHKAATFFGCIGIDKFGEILKKKAAEAHVDAHYYEQNEQPTGT 453
GGSTQNSIKVAQWMIQQPHKAATFFGCIGIDKFGEILK+KAAEAHVDAHYYEQNEQPTGT
Sbjct: 63 GGSTQNSIKVAQWMIQQPHKAATFFGCIGIDKFGEILKRKAAEAHVDAHYYEQNEQPTGT 122
Query: 454 CAACITGGNRSLVANLAAANCYKKEKHLDMEKNWTLVDKARVYYIAGFFLTVSPESVLKV 633
CAACITG NRSL+ANLAAANCYKKEKHLD+EKNW LV+KARV YIAGFFLTVSPESVLKV
Sbjct: 123 CAACITGDNRSLIANLAAANCYKKEKHLDLEKNWMLVEKARVCYIAGFFLTVSPESVLKV 182
Query: 634 AHHASENNRIFTLNLSAPFISQFYKESLMKVMPYVDILFGNETEAATFAREQGFETEDIK 813
AHHASENNRIFTLNLSAPFISQFYKESLMKVMPYVDILFGNETEAATFAREQGFET+DIK
Sbjct: 183 AHHASENNRIFTLNLSAPFISQFYKESLMKVMPYVDILFGNETEAATFAREQGFETKDIK 242
Query: 814 EIAKKTQALPKVNFERQRIVISPRER 891
EIAKKTQALPK+N +RQRIVI + R
Sbjct: 243 EIAKKTQALPKMNSKRQRIVIFTQGR 268
>ref|NP_001189378.1| adenosine kinase isoform c [Homo sapiens].
Length = 327
Score = 454 bits (1169), Expect = e-128
Identities = 230/266 (86%), Positives = 240/266 (90%)
Frame = +1
Query: 94 TLSENILFGMGNPLLDISAVVDKDFLDKYSLKPNDQILAEDKHKELFDELVKKFKVEYHA 273
++ ENILFGMGNPLLDISAVVDKDFLDK FDELVKKFKVEYHA
Sbjct: 3 SVRENILFGMGNPLLDISAVVDKDFLDK------------------FDELVKKFKVEYHA 44
Query: 274 GGSTQNSIKVAQWMIQQPHKAATFFGCIGIDKFGEILKKKAAEAHVDAHYYEQNEQPTGT 453
GGSTQNSIKVAQWMIQQPHKAATFFGCIGIDKFGEILK+KAAEAHVDAHYYEQNEQPTGT
Sbjct: 45 GGSTQNSIKVAQWMIQQPHKAATFFGCIGIDKFGEILKRKAAEAHVDAHYYEQNEQPTGT 104
Query: 454 CAACITGGNRSLVANLAAANCYKKEKHLDMEKNWTLVDKARVYYIAGFFLTVSPESVLKV 633
CAACITG NRSL+ANLAAANCYKKEKHLD+EKNW LV+KARV YIAGFFLTVSPESVLKV
Sbjct: 105 CAACITGDNRSLIANLAAANCYKKEKHLDLEKNWMLVEKARVCYIAGFFLTVSPESVLKV 164
Query: 634 AHHASENNRIFTLNLSAPFISQFYKESLMKVMPYVDILFGNETEAATFAREQGFETEDIK 813
AHHASENNRIFTLNLSAPFISQFYKESLMKVMPYVDILFGNETEAATFAREQGFET+DIK
Sbjct: 165 AHHASENNRIFTLNLSAPFISQFYKESLMKVMPYVDILFGNETEAATFAREQGFETKDIK 224
Query: 814 EIAKKTQALPKVNFERQRIVISPRER 891
EIAKKTQALPK+N +RQRIVI + R
Sbjct: 225 EIAKKTQALPKMNSKRQRIVIFTQGR 250
>ref|NP_001189379.1| adenosine kinase isoform d [Homo sapiens].
Length = 305
Score = 326 bits (836), Expect = 2e-89
Identities = 157/167 (94%), Positives = 162/167 (97%)
Frame = +1
Query: 91 RTLSENILFGMGNPLLDISAVVDKDFLDKYSLKPNDQILAEDKHKELFDELVKKFKVEYH 270
+ L ENILFGMGNPLLDISAVVDKDFLDKYSLKPNDQILAEDKHKELFDELVKKFKVEYH
Sbjct: 19 QALRENILFGMGNPLLDISAVVDKDFLDKYSLKPNDQILAEDKHKELFDELVKKFKVEYH 78
Query: 271 AGGSTQNSIKVAQWMIQQPHKAATFFGCIGIDKFGEILKKKAAEAHVDAHYYEQNEQPTG 450
AGGSTQNSIKVAQWMIQQPHKAATFFGCIGIDKFGEILK+KAAEAHVDAHYYEQNEQPTG
Sbjct: 79 AGGSTQNSIKVAQWMIQQPHKAATFFGCIGIDKFGEILKRKAAEAHVDAHYYEQNEQPTG 138
Query: 451 TCAACITGGNRSLVANLAAANCYKKEKHLDMEKNWTLVDKARVYYIA 591
TCAACITG NRSL+ANLAAANCYKKEKHLD+EKNW LV+KARV YIA
Sbjct: 139 TCAACITGDNRSLIANLAAANCYKKEKHLDLEKNWMLVEKARVCYIA 185
Score = 69.3 bits (168), Expect = 4e-12
Identities = 35/43 (81%), Positives = 39/43 (90%)
Frame = +1
Query: 763 EAATFAREQGFETEDIKEIAKKTQALPKVNFERQRIVISPRER 891
EAATFAREQGFET+DIKEIAKKTQALPK+N +RQRIVI + R
Sbjct: 186 EAATFAREQGFETKDIKEIAKKTQALPKMNSKRQRIVIFTQGR 228
Database: RefSeq49_HP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,297,164
Number of sequences in database: 32,964
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 32964
Number of Hits to DB: 29,404,631
Number of extensions: 658840
Number of successful extensions: 1612
Number of sequences better than 1.0e-05: 4
Number of HSP's gapped: 1611
Number of HSP's successfully gapped: 5
Length of query: 302
Length of database: 18,297,164
Length adjustment: 102
Effective length of query: 200
Effective length of database: 14,934,836
Effective search space: 2986967200
Effective search space used: 2986967200
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)
Search to Sscrofa10_2
BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-013552
(908 letters)
Database: Sscrofa_10.2.fasta
4582 sequences; 2,808,509,378 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Sscrofa_Chr14 357 7e-96
>Sscrofa_Chr14
|| Length = 153851969
Score = 357 bits (180), Expect = 7e-96
Identities = 180/180 (100%)
Strand = Plus / Plus
Query: 306 tcagtggatgattcagcagccacacaaagcagcaacattttttggatgcatcgggataga 365
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 83196328 tcagtggatgattcagcagccacacaaagcagcaacattttttggatgcatcgggataga 83196387
Query: 366 taaatttggggagatcctgaagaaaaaagccgctgaagcccatgtggatgctcattacta 425
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 83196388 taaatttggggagatcctgaagaaaaaagccgctgaagcccatgtggatgctcattacta 83196447
Query: 426 tgaacagaatgagcagccaacaggaacttgtgctgcatgcatcactggtggcaacaggtc 485
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 83196448 tgaacagaatgagcagccaacaggaacttgtgctgcatgcatcactggtggcaacaggtc 83196507
Score = 341 bits (172), Expect = 4e-91
Identities = 172/172 (100%)
Strand = Plus / Plus
Query: 592 ggttttttcctcacagtttccccagagtcagttttaaaagtggctcaccatgcttctgaa 651
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 83295512 ggttttttcctcacagtttccccagagtcagttttaaaagtggctcaccatgcttctgaa 83295571
Query: 652 aacaacagaatttttactttgaatctgtctgcaccatttattagtcagttctacaaggaa 711
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 83295572 aacaacagaatttttactttgaatctgtctgcaccatttattagtcagttctacaaggaa 83295631
Query: 712 tcattgatgaaagttatgccttatgttgacatactttttggaaatgagacgg 763
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 83295632 tcattgatgaaagttatgccttatgttgacatactttttggaaatgagacgg 83295683
Score = 222 bits (112), Expect = 3e-55
Identities = 112/112 (100%)
Strand = Plus / Plus
Query: 481 aggtcccttgtagctaatcttgctgctgctaattgttataaaaaggagaaacatcttgat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 83204455 aggtcccttgtagctaatcttgctgctgctaattgttataaaaaggagaaacatcttgat 83204514
Query: 541 atggagaaaaactggaccttggtagacaaagcaagagtttattatatagcag 592
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 83204515 atggagaaaaactggaccttggtagacaaagcaagagtttattatatagcag 83204566
Score = 200 bits (101), Expect = 9e-49
Identities = 101/101 (100%)
Strand = Plus / Plus
Query: 1 cgtgcgctggtgcttaagtgaggtgggagcgtgaagatggcagcggttgaagaagagcca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 82962374 cgtgcgctggtgcttaagtgaggtgggagcgtgaagatggcagcggttgaagaagagcca 82962433
Query: 61 aagcccaaaaagctgaaggtggaggcgctgcgaacgctgag 101
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 82962434 aagcccaaaaagctgaaggtggaggcgctgcgaacgctgag 82962474
Score = 163 bits (82), Expect = 2e-37
Identities = 108/114 (94%), Gaps = 2/114 (1%)
Strand = Plus / Plus
Query: 797 agactgaagatattaaagaaatagccaaaaagacacaagctctgccaaaggtgaacttcg 856
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 83357222 agactgaagatattaaagaaatagccaaaaagacacaagctctgccaaaggtgaactcga 83357281
Query: 857 agaggcagcgaattgtga-tttcaccc-agggagagatgaccctatactggcta 908
|||||||||||||||||| |||||||| ||||||||||||| ||||||||||||
Sbjct: 83357282 agaggcagcgaattgtgattttcacccaagggagagatgacactatactggcta 83357335
Score = 159 bits (80), Expect = 3e-36
Identities = 80/80 (100%)
Strand = Plus / Plus
Query: 100 agtgaaaatattctctttggaatgggaaatcctcttcttgacatcagtgctgtagtggat 159
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 83007014 agtgaaaatattctctttggaatgggaaatcctcttcttgacatcagtgctgtagtggat 83007073
Query: 160 aaggatttccttgataagta 179
||||||||||||||||||||
Sbjct: 83007074 aaggatttccttgataagta 83007093
Score = 115 bits (58), Expect = 4e-23
Identities = 72/79 (91%)
Strand = Plus / Plus
Query: 231 gtttgatgaacttgtnnnnnnnttcaaagttgaatatcatgctggtggctctacccagaa 290
||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 83122838 gtttgatgaacttgtaaaaaaattcaaagttgaatatcatgctggtggctctacccagaa 83122897
Query: 291 ttcaattaaagtggctcag 309
|||||||||||||||||||
Sbjct: 83122898 ttcaattaaagtggctcag 83122916
Score = 111 bits (56), Expect = 7e-22
Identities = 56/56 (100%)
Strand = Plus / Plus
Query: 177 gtattctcttaaaccaaatgaccaaatcttggctgaagacaaacataaggaactgt 232
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 83023155 gtattctcttaaaccaaatgaccaaatcttggctgaagacaaacataaggaactgt 83023210
Score = 73.8 bits (37), Expect = 1e-10
Identities = 37/37 (100%)
Strand = Plus / Plus
Query: 762 ggaagctgccacttttgctagagagcaaggctttgag 798
|||||||||||||||||||||||||||||||||||||
Sbjct: 83348641 ggaagctgccacttttgctagagagcaaggctttgag 83348677
Database: Sscrofa_10.2.fasta
Posted date: Nov 16, 2011 10:34 AM
Number of letters in database: 2,808,509,378
Number of sequences in database: 4582
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4582
Number of Hits to DB: 33,849,202
Number of extensions: 246
Number of successful extensions: 246
Number of sequences better than 1.0e-05: 1
Number of HSP's gapped: 245
Number of HSP's successfully gapped: 9
Length of query: 908
Length of database: 2,808,509,378
Length adjustment: 21
Effective length of query: 887
Effective length of database: 2,808,413,156
Effective search space: 2491062469372
Effective search space used: 2491062469372
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 18 (36.2 bits)
S2: 29 (58.0 bits)