Search to RefSeqCP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-013611
(1047 letters)
Database: RefSeq49_CP.fasta
33,336 sequences; 18,874,504 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_867360.1| PREDICTED: similar to cleavage stimulation fact... 566 e-162
Alignment gi|XP_867349.1| PREDICTED: similar to cleavage stimulation fact... 566 e-162
Alignment gi|XP_853412.1| PREDICTED: similar to cleavage stimulation fact... 566 e-162
Alignment gi|XP_867338.1| PREDICTED: similar to cleavage stimulation fact... 542 e-154
Alignment gi|XP_541857.2| PREDICTED: similar to WD repeat domain 51A isof... 66 5e-11
Alignment gi|XP_862542.1| PREDICTED: similar to Katanin p80 WD40-containi... 65 1e-10
Alignment gi|XP_850865.1| PREDICTED: similar to Katanin p80 WD40-containi... 65 1e-10
Alignment gi|XP_536057.2| PREDICTED: similar to sperm associated antigen ... 62 9e-10
Alignment gi|XP_532646.2| PREDICTED: similar to WD repeat domain 51B [Can... 62 9e-10
Alignment gi|XP_534593.2| PREDICTED: similar to CG7568-PA [Canis familiar... 60 4e-09
>ref|XP_867360.1| PREDICTED: similar to cleavage stimulation factor, 3 pre-RNA, subunit
1 (predicted) isoform 5 [Canis familiaris].
Length = 431
Score = 567 bits (1460), Expect = e-162
Identities = 280/282 (99%), Positives = 282/282 (100%)
Frame = +2
Query: 164 MYRTKVGLKDRQQLYKLIISQLLYDGYISIANGLINEIKPQSVCAPSEQLLHLIKLGMEN 343
MYRTKVGLKDRQQLYKLIISQLLYDGYISIANGLINEIKPQSVCAPSEQLLHLIKLGMEN
Sbjct: 1 MYRTKVGLKDRQQLYKLIISQLLYDGYISIANGLINEIKPQSVCAPSEQLLHLIKLGMEN 60
Query: 344 DDTAVQYAIGRSDTVAPGTGIDLEFDADVQTMSPEASEYETCYVTSHKGPCRVATYSRDG 523
DDTAVQYAIGRSDTVAPGTGIDLEFDADVQTMSPEASEYETCYVTSHKGPCRVATYSRDG
Sbjct: 61 DDTAVQYAIGRSDTVAPGTGIDLEFDADVQTMSPEASEYETCYVTSHKGPCRVATYSRDG 120
Query: 524 QLIATGSADASIKILDTERMLAKSAMPIEVMMNETAQQNMENHPVIRTLYDHVDEVTCLA 703
QLIATGSADASIKILDTERMLAKSAMPIEVMMNETAQQNMENHPVIRTLYDHVDEVTCLA
Sbjct: 121 QLIATGSADASIKILDTERMLAKSAMPIEVMMNETAQQNMENHPVIRTLYDHVDEVTCLA 180
Query: 704 FHPTEQILASGSRDYTLKLFDYSKPSAKRAFKYIQEAEMLRSISFHPSGDFILVGTQHPT 883
FHPTEQILASGSRDYTLKLFDYSKPSAKRAFKYIQEAEMLRSISFHPSGDFILVGTQHPT
Sbjct: 181 FHPTEQILASGSRDYTLKLFDYSKPSAKRAFKYIQEAEMLRSISFHPSGDFILVGTQHPT 240
Query: 884 LRLYDINTFQCFVSCNPQDQHTDAICSVNYNPSAHMYVTGSR 1009
LRLYDINTFQCFVSCNPQDQHTDAICSVNYNPSA+MYVTGS+
Sbjct: 241 LRLYDINTFQCFVSCNPQDQHTDAICSVNYNPSANMYVTGSK 282
>ref|XP_867349.1| PREDICTED: similar to cleavage stimulation factor, 3 pre-RNA, subunit
1 (predicted) isoform 4 [Canis familiaris].
Length = 428
Score = 567 bits (1460), Expect = e-162
Identities = 280/282 (99%), Positives = 282/282 (100%)
Frame = +2
Query: 164 MYRTKVGLKDRQQLYKLIISQLLYDGYISIANGLINEIKPQSVCAPSEQLLHLIKLGMEN 343
MYRTKVGLKDRQQLYKLIISQLLYDGYISIANGLINEIKPQSVCAPSEQLLHLIKLGMEN
Sbjct: 1 MYRTKVGLKDRQQLYKLIISQLLYDGYISIANGLINEIKPQSVCAPSEQLLHLIKLGMEN 60
Query: 344 DDTAVQYAIGRSDTVAPGTGIDLEFDADVQTMSPEASEYETCYVTSHKGPCRVATYSRDG 523
DDTAVQYAIGRSDTVAPGTGIDLEFDADVQTMSPEASEYETCYVTSHKGPCRVATYSRDG
Sbjct: 61 DDTAVQYAIGRSDTVAPGTGIDLEFDADVQTMSPEASEYETCYVTSHKGPCRVATYSRDG 120
Query: 524 QLIATGSADASIKILDTERMLAKSAMPIEVMMNETAQQNMENHPVIRTLYDHVDEVTCLA 703
QLIATGSADASIKILDTERMLAKSAMPIEVMMNETAQQNMENHPVIRTLYDHVDEVTCLA
Sbjct: 121 QLIATGSADASIKILDTERMLAKSAMPIEVMMNETAQQNMENHPVIRTLYDHVDEVTCLA 180
Query: 704 FHPTEQILASGSRDYTLKLFDYSKPSAKRAFKYIQEAEMLRSISFHPSGDFILVGTQHPT 883
FHPTEQILASGSRDYTLKLFDYSKPSAKRAFKYIQEAEMLRSISFHPSGDFILVGTQHPT
Sbjct: 181 FHPTEQILASGSRDYTLKLFDYSKPSAKRAFKYIQEAEMLRSISFHPSGDFILVGTQHPT 240
Query: 884 LRLYDINTFQCFVSCNPQDQHTDAICSVNYNPSAHMYVTGSR 1009
LRLYDINTFQCFVSCNPQDQHTDAICSVNYNPSA+MYVTGS+
Sbjct: 241 LRLYDINTFQCFVSCNPQDQHTDAICSVNYNPSANMYVTGSK 282
>ref|XP_853412.1| PREDICTED: similar to cleavage stimulation factor, 3 pre-RNA, subunit
1 (predicted) isoform 2 [Canis familiaris].
Length = 431
Score = 567 bits (1460), Expect = e-162
Identities = 280/282 (99%), Positives = 282/282 (100%)
Frame = +2
Query: 164 MYRTKVGLKDRQQLYKLIISQLLYDGYISIANGLINEIKPQSVCAPSEQLLHLIKLGMEN 343
MYRTKVGLKDRQQLYKLIISQLLYDGYISIANGLINEIKPQSVCAPSEQLLHLIKLGMEN
Sbjct: 1 MYRTKVGLKDRQQLYKLIISQLLYDGYISIANGLINEIKPQSVCAPSEQLLHLIKLGMEN 60
Query: 344 DDTAVQYAIGRSDTVAPGTGIDLEFDADVQTMSPEASEYETCYVTSHKGPCRVATYSRDG 523
DDTAVQYAIGRSDTVAPGTGIDLEFDADVQTMSPEASEYETCYVTSHKGPCRVATYSRDG
Sbjct: 61 DDTAVQYAIGRSDTVAPGTGIDLEFDADVQTMSPEASEYETCYVTSHKGPCRVATYSRDG 120
Query: 524 QLIATGSADASIKILDTERMLAKSAMPIEVMMNETAQQNMENHPVIRTLYDHVDEVTCLA 703
QLIATGSADASIKILDTERMLAKSAMPIEVMMNETAQQNMENHPVIRTLYDHVDEVTCLA
Sbjct: 121 QLIATGSADASIKILDTERMLAKSAMPIEVMMNETAQQNMENHPVIRTLYDHVDEVTCLA 180
Query: 704 FHPTEQILASGSRDYTLKLFDYSKPSAKRAFKYIQEAEMLRSISFHPSGDFILVGTQHPT 883
FHPTEQILASGSRDYTLKLFDYSKPSAKRAFKYIQEAEMLRSISFHPSGDFILVGTQHPT
Sbjct: 181 FHPTEQILASGSRDYTLKLFDYSKPSAKRAFKYIQEAEMLRSISFHPSGDFILVGTQHPT 240
Query: 884 LRLYDINTFQCFVSCNPQDQHTDAICSVNYNPSAHMYVTGSR 1009
LRLYDINTFQCFVSCNPQDQHTDAICSVNYNPSA+MYVTGS+
Sbjct: 241 LRLYDINTFQCFVSCNPQDQHTDAICSVNYNPSANMYVTGSK 282
>ref|XP_867338.1| PREDICTED: similar to cleavage stimulation factor, 3 pre-RNA, subunit
1 (predicted) isoform 3 [Canis familiaris].
Length = 422
Score = 542 bits (1396), Expect = e-154
Identities = 271/282 (96%), Positives = 273/282 (96%)
Frame = +2
Query: 164 MYRTKVGLKDRQQLYKLIISQLLYDGYISIANGLINEIKPQSVCAPSEQLLHLIKLGMEN 343
MYRTKVGLKDRQQLYKLIISQLLYDGYISIANGLINEIKPQSVCAPSEQLLHLIKLGMEN
Sbjct: 1 MYRTKVGLKDRQQLYKLIISQLLYDGYISIANGLINEIKPQSVCAPSEQLLHLIKLGMEN 60
Query: 344 DDTAVQYAIGRSDTVAPGTGIDLEFDADVQTMSPEASEYETCYVTSHKGPCRVATYSRDG 523
DDTAVQYAIGRSDTVAPGTGIDLEFDADVQTMSPEASEYETCYVTSHKGPCRVATYSRDG
Sbjct: 61 DDTAVQYAIGRSDTVAPGTGIDLEFDADVQTMSPEASEYETCYVTSHKGPCRVATYSRDG 120
Query: 524 QLIATGSADASIKILDTERMLAKSAMPIEVMMNETAQQNMENHPVIRTLYDHVDEVTCLA 703
QLIATGSADASIKILDTERMLAKSAMPIE NMENHPVIRTLYDHVDEVTCLA
Sbjct: 121 QLIATGSADASIKILDTERMLAKSAMPIE---------NMENHPVIRTLYDHVDEVTCLA 171
Query: 704 FHPTEQILASGSRDYTLKLFDYSKPSAKRAFKYIQEAEMLRSISFHPSGDFILVGTQHPT 883
FHPTEQILASGSRDYTLKLFDYSKPSAKRAFKYIQEAEMLRSISFHPSGDFILVGTQHPT
Sbjct: 172 FHPTEQILASGSRDYTLKLFDYSKPSAKRAFKYIQEAEMLRSISFHPSGDFILVGTQHPT 231
Query: 884 LRLYDINTFQCFVSCNPQDQHTDAICSVNYNPSAHMYVTGSR 1009
LRLYDINTFQCFVSCNPQDQHTDAICSVNYNPSA+MYVTGS+
Sbjct: 232 LRLYDINTFQCFVSCNPQDQHTDAICSVNYNPSANMYVTGSK 273
>ref|XP_541857.2| PREDICTED: similar to WD repeat domain 51A isoform 1 [Canis
familiaris].
Length = 406
Score = 66.2 bits (160), Expect = 5e-11
Identities = 43/182 (23%), Positives = 79/182 (43%)
Frame = +2
Query: 461 ETCYVTSHKGPCRVATYSRDGQLIATGSADASIKILDTERMLAKSAMPIEVMMNETAQQN 640
E+ +H R + DGQ + T S D ++K+ T R
Sbjct: 95 ESTVFRAHTATVRSVHFCSDGQSLVTASDDKTVKVWSTHRQ------------------- 135
Query: 641 MENHPVIRTLYDHVDEVTCLAFHPTEQILASGSRDYTLKLFDYSKPSAKRAFKYIQEAEM 820
+ +L H++ V C F P +++ S S D T+KL+D K S + Y +
Sbjct: 136 ----KFLFSLSQHINWVRCARFSPDGRLIVSASDDKTVKLWD--KTSRECVHSYCEHGGF 189
Query: 821 LRSISFHPSGDFILVGTQHPTLRLYDINTFQCFVSCNPQDQHTDAICSVNYNPSAHMYVT 1000
+ + FHPSG I + T++++D+ T + H+ A+ +++++PS + +T
Sbjct: 190 VTYVDFHPSGTCIAAASMDNTVKVWDVRTHRLL---QHYQLHSAAVNALSFHPSGNYLLT 246
Query: 1001 GS 1006
S
Sbjct: 247 AS 248
Score = 55.5 bits (132), Expect = 8e-08
Identities = 37/144 (25%), Positives = 72/144 (50%), Gaps = 1/144 (0%)
Frame = +2
Query: 473 VTSHKGPCRVATYSRDGQLIATGSADASIKILDTERMLAKSAMPIEVMMNETAQQNMENH 652
++ H R A +S DG+LI + S D ++K+ D +T+++
Sbjct: 141 LSQHINWVRCARFSPDGRLIVSASDDKTVKLWD-----------------KTSRE----- 178
Query: 653 PVIRTLYDHVDEVTCLAFHPTEQILASGSRDYTLKLFDYSKPSAKRAFKYIQ-EAEMLRS 829
+ + +H VT + FHP+ +A+ S D T+K++D R ++ Q + + +
Sbjct: 179 -CVHSYCEHGGFVTYVDFHPSGTCIAAASMDNTVKVWDVR---THRLLQHYQLHSAAVNA 234
Query: 830 ISFHPSGDFILVGTQHPTLRLYDI 901
+SFHPSG+++L + TL++ D+
Sbjct: 235 LSFHPSGNYLLTASSDSTLKILDL 258
>ref|XP_862542.1| PREDICTED: similar to Katanin p80 WD40-containing subunit B1 (Katanin
p80 subunit B1) (p80 katanin) isoform 2 [Canis
familiaris].
Length = 655
Score = 64.7 bits (156), Expect = 1e-10
Identities = 42/178 (23%), Positives = 77/178 (43%)
Frame = +2
Query: 473 VTSHKGPCRVATYSRDGQLIATGSADASIKILDTERMLAKSAMPIEVMMNETAQQNMENH 652
+T H P + +LI GS SI++ D +E
Sbjct: 59 LTGHTSPVESVRLNTPEELIVAGSQSGSIRVWD-----------------------LEAA 95
Query: 653 PVIRTLYDHVDEVTCLAFHPTEQILASGSRDYTLKLFDYSKPSAKRAFKYIQEAEMLRSI 832
++RTL H + L FHP + +ASGS+D +KL+D + F+Y ++ +R +
Sbjct: 96 KILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGC--VFRYRGHSQAVRCL 153
Query: 833 SFHPSGDFILVGTQHPTLRLYDINTFQCFVSCNPQDQHTDAICSVNYNPSAHMYVTGS 1006
F P G ++ T++L+D+ + + HT + V ++P+ ++ +GS
Sbjct: 154 RFSPDGKWLASAADDHTVKLWDLTAGKMM---SEFPGHTGPVNVVEFHPNEYLLASGS 208
Score = 52.8 bits (125), Expect = 5e-07
Identities = 41/146 (28%), Positives = 63/146 (43%)
Frame = +2
Query: 482 HKGPCRVATYSRDGQLIATGSADASIKILDTERMLAKSAMPIEVMMNETAQQNMENHPVI 661
H R +S DG+ +A+ + D ++K+ D TA + M P
Sbjct: 146 HSQAVRCLRFSPDGKWLASAADDHTVKLWDL-----------------TAGKMMSEFP-- 186
Query: 662 RTLYDHVDEVTCLAFHPTEQILASGSRDYTLKLFDYSKPSAKRAFKYIQEAEMLRSISFH 841
H V + FHP E +LASGS D T++ +D K + E +RS+ F+
Sbjct: 187 ----GHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIE--GEPGPVRSVLFN 240
Query: 842 PSGDFILVGTQHPTLRLYDINTFQCF 919
P G + G Q +LR+Y +CF
Sbjct: 241 PDGCCLYSGCQ-DSLRVYGWEPERCF 265
>ref|XP_850865.1| PREDICTED: similar to Katanin p80 WD40-containing subunit B1 (Katanin
p80 subunit B1) (p80 katanin) isoform 1 [Canis
familiaris].
Length = 655
Score = 64.7 bits (156), Expect = 1e-10
Identities = 42/178 (23%), Positives = 77/178 (43%)
Frame = +2
Query: 473 VTSHKGPCRVATYSRDGQLIATGSADASIKILDTERMLAKSAMPIEVMMNETAQQNMENH 652
+T H P + +LI GS SI++ D +E
Sbjct: 59 LTGHTSPVESVRLNTPEELIVAGSQSGSIRVWD-----------------------LEAA 95
Query: 653 PVIRTLYDHVDEVTCLAFHPTEQILASGSRDYTLKLFDYSKPSAKRAFKYIQEAEMLRSI 832
++RTL H + L FHP + +ASGS+D +KL+D + F+Y ++ +R +
Sbjct: 96 KILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGC--VFRYRGHSQAVRCL 153
Query: 833 SFHPSGDFILVGTQHPTLRLYDINTFQCFVSCNPQDQHTDAICSVNYNPSAHMYVTGS 1006
F P G ++ T++L+D+ + + HT + V ++P+ ++ +GS
Sbjct: 154 RFSPDGKWLASAADDHTVKLWDLTAGKMM---SEFPGHTGPVNVVEFHPNEYLLASGS 208
Score = 52.8 bits (125), Expect = 5e-07
Identities = 41/146 (28%), Positives = 63/146 (43%)
Frame = +2
Query: 482 HKGPCRVATYSRDGQLIATGSADASIKILDTERMLAKSAMPIEVMMNETAQQNMENHPVI 661
H R +S DG+ +A+ + D ++K+ D TA + M P
Sbjct: 146 HSQAVRCLRFSPDGKWLASAADDHTVKLWDL-----------------TAGKMMSEFP-- 186
Query: 662 RTLYDHVDEVTCLAFHPTEQILASGSRDYTLKLFDYSKPSAKRAFKYIQEAEMLRSISFH 841
H V + FHP E +LASGS D T++ +D K + E +RS+ F+
Sbjct: 187 ----GHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIE--GEPGPVRSVLFN 240
Query: 842 PSGDFILVGTQHPTLRLYDINTFQCF 919
P G + G Q +LR+Y +CF
Sbjct: 241 PDGCCLYSGCQ-DSLRVYGWEPERCF 265
>ref|XP_536057.2| PREDICTED: similar to sperm associated antigen 16 isoform 1 [Canis
familiaris].
Length = 681
Score = 62.0 bits (149), Expect = 9e-10
Identities = 35/117 (29%), Positives = 65/117 (55%)
Frame = +2
Query: 656 VIRTLYDHVDEVTCLAFHPTEQILASGSRDYTLKLFDYSKPSAKRAFKYIQEAEMLRSIS 835
V+ T + H D ++ FHP+ LA+ S D T+KL+D SK + F+ + + S +
Sbjct: 485 VLHTGFGHTDWLSNCCFHPSGNKLATSSGDTTVKLWDLSKGNCILTFE--GHSHAVWSCT 542
Query: 836 FHPSGDFILVGTQHPTLRLYDINTFQCFVSCNPQDQHTDAICSVNYNPSAHMYVTGS 1006
+H GDF+ + T +++D+N+ +C + HTD++ S+ + P ++ +TGS
Sbjct: 543 WHSCGDFVASSSLDTTSKIWDVNSERCRCTLY---GHTDSVNSIEFFPCSNTLLTGS 596
>ref|XP_532646.2| PREDICTED: similar to WD repeat domain 51B [Canis familiaris].
Length = 833
Score = 62.0 bits (149), Expect = 9e-10
Identities = 43/176 (24%), Positives = 71/176 (40%)
Frame = +2
Query: 479 SHKGPCRVATYSRDGQLIATGSADASIKILDTERMLAKSAMPIEVMMNETAQQNMENHPV 658
+H P R +S DGQ +AT S D SIK+ NM
Sbjct: 455 AHTAPVRSVDFSADGQFLATASEDKSIKV-----------------------WNMYRQRF 491
Query: 659 IRTLYDHVDEVTCLAFHPTEQILASGSRDYTLKLFDYSKPSAKRAFKYIQEAEMLRSISF 838
+ +LY H V C F P +++ S S D T+K++D + F + F
Sbjct: 492 LYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFS--DSVGFANFVDF 549
Query: 839 HPSGDFILVGTQHPTLRLYDINTFQCFVSCNPQDQHTDAICSVNYNPSAHMYVTGS 1006
+P+G I T++++DI + H+ + V+++PS + +T S
Sbjct: 550 NPNGTCIASAGSDHTVKIWDIRVNKLL---QHYQVHSGGVNCVSFHPSGNYIITAS 602
>ref|XP_534593.2| PREDICTED: similar to CG7568-PA [Canis familiaris].
Length = 415
Score = 59.7 bits (143), Expect = 4e-09
Identities = 49/178 (27%), Positives = 75/178 (42%)
Frame = +2
Query: 503 ATYSRDGQLIATGSADASIKILDTERMLAKSAMPIEVMMNETAQQNMENHPVIRTLYDHV 682
A ++ D LI TGS D + + D N + TL H
Sbjct: 267 ALFNWDCSLILTGSMDKTCMLWDAS-----------------------NGKCVATLTGHD 303
Query: 683 DEVTCLAFHPTEQILASGSRDYTLKLFDYSKPSAKRAFKYIQEAEMLRSISFHPSGDFIL 862
DE+ F T +++A+ S D T ++F S + K K + ISF+P G+ +L
Sbjct: 304 DEILDSCFDYTGKLIATASADGTARVF--SAATRKCLTKLEGHEGEISKISFNPQGNRLL 361
Query: 863 VGTQHPTLRLYDINTFQCFVSCNPQDQHTDAICSVNYNPSAHMYVTGSRTAASNMGWR 1036
G+ T R++D T QC + HTD I S +N + +TGS+ + WR
Sbjct: 362 TGSADETARIWDAQTGQCL---QVLEGHTDEIFSCAFNYKGDIIITGSKDNTCRI-WR 415
Score = 53.1 bits (126), Expect = 4e-07
Identities = 43/162 (26%), Positives = 71/162 (43%)
Frame = +2
Query: 521 GQLIATGSADASIKILDTERMLAKSAMPIEVMMNETAQQNMENHPVIRTLYDHVDEVTCL 700
G IATGS D + K+ ++E T H E+ CL
Sbjct: 147 GDKIATGSFDKTCKLW-----------------------SVETGKCYHTFRGHTAEIVCL 183
Query: 701 AFHPTEQILASGSRDYTLKLFDYSKPSAKRAFKYIQEAEMLRSISFHPSGDFILVGTQHP 880
+F+P ++A+GS D T KL+D S + F + + S+SF+ SGD I+ G+
Sbjct: 184 SFNPQSTLVATGSMDTTAKLWDIQ--SGEEVFTLRGHSAEIISLSFNTSGDRIVTGSFDH 241
Query: 881 TLRLYDINTFQCFVSCNPQDQHTDAICSVNYNPSAHMYVTGS 1006
T+ +++ +T + + H I S +N + +TGS
Sbjct: 242 TVAVWEADTGRKVYTL---IGHCAEISSALFNWDCSLILTGS 280
Database: RefSeq49_CP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,874,504
Number of sequences in database: 33,336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33336
Number of Hits to DB: 40,022,554
Number of extensions: 1003392
Number of successful extensions: 3585
Number of sequences better than 1.0e-05: 29
Number of HSP's gapped: 3403
Number of HSP's successfully gapped: 38
Length of query: 349
Length of database: 18,874,504
Length adjustment: 104
Effective length of query: 245
Effective length of database: 15,407,560
Effective search space: 3774852200
Effective search space used: 3774852200
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Animal-Genome cDNA 20110601C-013611
Search to RefSeqBP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-013611
(1047 letters)
Database: RefSeq49_BP.fasta
33,088 sequences; 17,681,374 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001071333.1| cleavage stimulation factor subunit 1 [Bos t... 565 e-161
Alignment gi|NP_001033649.1| POC1 centriolar protein homolog A [Bos tauru... 65 8e-11
Alignment gi|NP_001095379.1| katanin p80 WD40-containing subunit B1 [Bos ... 65 1e-10
Alignment gi|NP_001178407.1| transcription initiation factor TFIID subuni... 62 8e-10
Alignment gi|XP_002698507.1| PREDICTED: TAF5 RNA polymerase II, TATA box ... 62 8e-10
Alignment gi|NP_001069398.1| WD repeat-containing protein 69 [Bos taurus]. 61 1e-09
Alignment gi|NP_001092501.1| WD repeat-containing protein 51B [Bos taurus]. 60 4e-09
Alignment gi|XP_001251626.3| PREDICTED: WD repeat domain 51B-like, partia... 60 4e-09
Alignment gi|XP_002685607.1| PREDICTED: sperm associated antigen 16 [Bos ... 59 7e-09
Alignment gi|XP_002686202.1| PREDICTED: guanine nucleotide-binding protei... 58 1e-08
>ref|NP_001071333.1| cleavage stimulation factor subunit 1 [Bos taurus].
Length = 431
Score = 565 bits (1456), Expect = e-161
Identities = 279/282 (98%), Positives = 282/282 (100%)
Frame = +2
Query: 164 MYRTKVGLKDRQQLYKLIISQLLYDGYISIANGLINEIKPQSVCAPSEQLLHLIKLGMEN 343
MYRTKVGLKDRQQLYKLIISQLLYDGYISIANGLINEIKPQSVCAPSEQLLHLIKLGMEN
Sbjct: 1 MYRTKVGLKDRQQLYKLIISQLLYDGYISIANGLINEIKPQSVCAPSEQLLHLIKLGMEN 60
Query: 344 DDTAVQYAIGRSDTVAPGTGIDLEFDADVQTMSPEASEYETCYVTSHKGPCRVATYSRDG 523
DD+AVQYAIGRSDTVAPGTGIDLEFDADVQTMSPEASEYETCYVTSHKGPCRVATYSRDG
Sbjct: 61 DDSAVQYAIGRSDTVAPGTGIDLEFDADVQTMSPEASEYETCYVTSHKGPCRVATYSRDG 120
Query: 524 QLIATGSADASIKILDTERMLAKSAMPIEVMMNETAQQNMENHPVIRTLYDHVDEVTCLA 703
QLIATGSADASIKILDTERMLAKSAMPIEVMMNETAQQNMENHPVIRTLYDHVDEVTCLA
Sbjct: 121 QLIATGSADASIKILDTERMLAKSAMPIEVMMNETAQQNMENHPVIRTLYDHVDEVTCLA 180
Query: 704 FHPTEQILASGSRDYTLKLFDYSKPSAKRAFKYIQEAEMLRSISFHPSGDFILVGTQHPT 883
FHPTEQILASGSRDYTLKLFDYSKPSAKRAFKYIQEAEMLRSISFHPSGDFILVGTQHPT
Sbjct: 181 FHPTEQILASGSRDYTLKLFDYSKPSAKRAFKYIQEAEMLRSISFHPSGDFILVGTQHPT 240
Query: 884 LRLYDINTFQCFVSCNPQDQHTDAICSVNYNPSAHMYVTGSR 1009
LRLYDINTFQCFVSCNPQDQHTDAICSVNYNPSA+MYVTGS+
Sbjct: 241 LRLYDINTFQCFVSCNPQDQHTDAICSVNYNPSANMYVTGSK 282
>ref|NP_001033649.1| POC1 centriolar protein homolog A [Bos taurus].
Length = 407
Score = 65.5 bits (158), Expect = 8e-11
Identities = 44/182 (24%), Positives = 77/182 (42%)
Frame = +2
Query: 461 ETCYVTSHKGPCRVATYSRDGQLIATGSADASIKILDTERMLAKSAMPIEVMMNETAQQN 640
E+ +H R + DGQ T S D ++K+ T R
Sbjct: 95 ESTVFRAHTATVRSVHFCSDGQSFVTASDDKTVKVWSTHRQ------------------- 135
Query: 641 MENHPVIRTLYDHVDEVTCLAFHPTEQILASGSRDYTLKLFDYSKPSAKRAFKYIQEAEM 820
+ +L H++ V C F P +++ S S D T+KL+D K S + Y +
Sbjct: 136 ----KFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWD--KTSRECVHSYCEHGGF 189
Query: 821 LRSISFHPSGDFILVGTQHPTLRLYDINTFQCFVSCNPQDQHTDAICSVNYNPSAHMYVT 1000
+ + FHPSG I T++++D+ T + H+ A+ +++++PS + VT
Sbjct: 190 VTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLL---QHYQLHSAAVNALSFHPSGNYLVT 246
Query: 1001 GS 1006
S
Sbjct: 247 AS 248
Score = 52.8 bits (125), Expect = 5e-07
Identities = 35/144 (24%), Positives = 71/144 (49%), Gaps = 1/144 (0%)
Frame = +2
Query: 473 VTSHKGPCRVATYSRDGQLIATGSADASIKILDTERMLAKSAMPIEVMMNETAQQNMENH 652
++ H R A +S DG+LI + S D ++K+ D +T+++
Sbjct: 141 LSQHINWVRCAKFSPDGRLIVSASDDKTVKLWD-----------------KTSRE----- 178
Query: 653 PVIRTLYDHVDEVTCLAFHPTEQILASGSRDYTLKLFDYSKPSAKRAFKYIQ-EAEMLRS 829
+ + +H VT + FHP+ +A+ D T+K++D R ++ Q + + +
Sbjct: 179 -CVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVR---THRLLQHYQLHSAAVNA 234
Query: 830 ISFHPSGDFILVGTQHPTLRLYDI 901
+SFHPSG++++ + TL++ D+
Sbjct: 235 LSFHPSGNYLVTASSDSTLKILDL 258
>ref|NP_001095379.1| katanin p80 WD40-containing subunit B1 [Bos taurus].
Length = 663
Score = 64.7 bits (156), Expect = 1e-10
Identities = 42/178 (23%), Positives = 77/178 (43%)
Frame = +2
Query: 473 VTSHKGPCRVATYSRDGQLIATGSADASIKILDTERMLAKSAMPIEVMMNETAQQNMENH 652
+T H P + +LI GS SI++ D +E
Sbjct: 59 LTGHTSPVESVRLNTPEELIVAGSQSGSIRVWD-----------------------LEAA 95
Query: 653 PVIRTLYDHVDEVTCLAFHPTEQILASGSRDYTLKLFDYSKPSAKRAFKYIQEAEMLRSI 832
++RTL H + L FHP + +ASGS+D +KL+D + F+Y ++ +R +
Sbjct: 96 KILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGC--VFRYRGHSQAVRCL 153
Query: 833 SFHPSGDFILVGTQHPTLRLYDINTFQCFVSCNPQDQHTDAICSVNYNPSAHMYVTGS 1006
F P G ++ T++L+D+ + + HT + V ++P+ ++ +GS
Sbjct: 154 RFSPDGKWLASAADDHTVKLWDLTAGKMM---SEFPGHTGPVNVVEFHPNEYLLASGS 208
Score = 53.1 bits (126), Expect = 4e-07
Identities = 42/146 (28%), Positives = 63/146 (43%)
Frame = +2
Query: 482 HKGPCRVATYSRDGQLIATGSADASIKILDTERMLAKSAMPIEVMMNETAQQNMENHPVI 661
H R +S DG+ +A+ + D ++K+ D TA + M P
Sbjct: 146 HSQAVRCLRFSPDGKWLASAADDHTVKLWDL-----------------TAGKMMSEFP-- 186
Query: 662 RTLYDHVDEVTCLAFHPTEQILASGSRDYTLKLFDYSKPSAKRAFKYIQEAEMLRSISFH 841
H V + FHP E +LASGS D T++ +D K + E +RSI F+
Sbjct: 187 ----GHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIE--GEPGPVRSILFN 240
Query: 842 PSGDFILVGTQHPTLRLYDINTFQCF 919
P G + G Q +LR+Y +CF
Sbjct: 241 PDGCCLYSGCQ-DSLRVYGWEPERCF 265
>ref|NP_001178407.1| transcription initiation factor TFIID subunit 5 [Bos taurus].
Length = 800
Score = 62.0 bits (149), Expect = 8e-10
Identities = 47/220 (21%), Positives = 88/220 (40%), Gaps = 19/220 (8%)
Frame = +2
Query: 404 IDLEFDADVQTMSPEASEYETCYVTSHKGPCRVATYSRDGQLIATGSADASIKILDTERM 583
ID E D ++ + E + E + H GP A++S D + + S D ++++ +
Sbjct: 516 IDKESDDVLERIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTF 575
Query: 584 LA-------------KSAMPIEVMMNETAQQNM------ENHPVIRTLYDHVDEVTCLAF 706
P + +++ +R H+ +V C F
Sbjct: 576 TCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRF 635
Query: 707 HPTEQILASGSRDYTLKLFDYSKPSAKRAFKYIQEAEMLRSISFHPSGDFILVGTQHPTL 886
HP +A+GS D T++L+D + R F + S++F P+G F+ G +
Sbjct: 636 HPNSNYVATGSADRTVRLWDVLNGNCVRIF--TGHKGPIHSLTFSPNGRFLATGATDGRV 693
Query: 887 RLYDINTFQCFVSCNPQDQHTDAICSVNYNPSAHMYVTGS 1006
L+DI + HTD +CS+ ++ + +GS
Sbjct: 694 LLWDIGH---GLMVGELKGHTDTVCSLRFSRDGEILASGS 730
>ref|XP_002698507.1| PREDICTED: TAF5 RNA polymerase II, TATA box binding protein
(TBP)-associated factor, 100kDa [Bos taurus].
Length = 800
Score = 62.0 bits (149), Expect = 8e-10
Identities = 47/220 (21%), Positives = 88/220 (40%), Gaps = 19/220 (8%)
Frame = +2
Query: 404 IDLEFDADVQTMSPEASEYETCYVTSHKGPCRVATYSRDGQLIATGSADASIKILDTERM 583
ID E D ++ + E + E + H GP A++S D + + S D ++++ +
Sbjct: 516 IDKESDDVLERIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTF 575
Query: 584 LA-------------KSAMPIEVMMNETAQQNM------ENHPVIRTLYDHVDEVTCLAF 706
P + +++ +R H+ +V C F
Sbjct: 576 TCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRF 635
Query: 707 HPTEQILASGSRDYTLKLFDYSKPSAKRAFKYIQEAEMLRSISFHPSGDFILVGTQHPTL 886
HP +A+GS D T++L+D + R F + S++F P+G F+ G +
Sbjct: 636 HPNSNYVATGSADRTVRLWDVLNGNCVRIF--TGHKGPIHSLTFSPNGRFLATGATDGRV 693
Query: 887 RLYDINTFQCFVSCNPQDQHTDAICSVNYNPSAHMYVTGS 1006
L+DI + HTD +CS+ ++ + +GS
Sbjct: 694 LLWDIGH---GLMVGELKGHTDTVCSLRFSRDGEILASGS 730
>ref|NP_001069398.1| WD repeat-containing protein 69 [Bos taurus].
Length = 415
Score = 61.2 bits (147), Expect = 1e-09
Identities = 49/178 (27%), Positives = 76/178 (42%)
Frame = +2
Query: 503 ATYSRDGQLIATGSADASIKILDTERMLAKSAMPIEVMMNETAQQNMENHPVIRTLYDHV 682
A ++ D LI TGS D + K+ D N + TL H
Sbjct: 267 AVFNWDCSLILTGSMDKTCKLWDAV-----------------------NGKCVATLTGHD 303
Query: 683 DEVTCLAFHPTEQILASGSRDYTLKLFDYSKPSAKRAFKYIQEAEMLRSISFHPSGDFIL 862
DE+ F T +++A+ S D T ++F S + + K + ISF+P G+ +L
Sbjct: 304 DEILDSCFDYTGKLIATASADGTARIF--SAATRECVTKLEGHEGEISKISFNPQGNRLL 361
Query: 863 VGTQHPTLRLYDINTFQCFVSCNPQDQHTDAICSVNYNPSAHMYVTGSRTAASNMGWR 1036
G+ T R++D T QC + HTD I S +N + +TGS+ + WR
Sbjct: 362 TGSSDKTARIWDAQTGQCL---QVLEGHTDEIFSCAFNYKGDIIITGSKDNTCRI-WR 415
Score = 52.4 bits (124), Expect = 7e-07
Identities = 42/162 (25%), Positives = 71/162 (43%)
Frame = +2
Query: 521 GQLIATGSADASIKILDTERMLAKSAMPIEVMMNETAQQNMENHPVIRTLYDHVDEVTCL 700
G IATGS D + K+ ++E T H E+ CL
Sbjct: 147 GDKIATGSFDKTCKLW-----------------------SVETGKCYHTFRGHTAEIVCL 183
Query: 701 AFHPTEQILASGSRDYTLKLFDYSKPSAKRAFKYIQEAEMLRSISFHPSGDFILVGTQHP 880
+F+P ++A+GS D T KL+D S + F + + S+SF+ SG+ I+ G+
Sbjct: 184 SFNPQSTLVATGSMDTTAKLWDIQ--SGEEVFTLTGHSAEIISLSFNTSGNRIITGSFDH 241
Query: 881 TLRLYDINTFQCFVSCNPQDQHTDAICSVNYNPSAHMYVTGS 1006
T+ +++ +T + + H I S +N + +TGS
Sbjct: 242 TVTVWEADTGRKVYTL---IGHCAEISSAVFNWDCSLILTGS 280
Score = 48.9 bits (115), Expect = 7e-06
Identities = 34/142 (23%), Positives = 68/142 (47%), Gaps = 1/142 (0%)
Frame = +2
Query: 605 IEVMMNETAQQNMENHPVIRTLYDHVDEVTCLAFHPTEQILASGSRDYTLKLFDYSKPSA 784
I+ + N+ Q + + + L H+ +T +A + + +GS D T KL+D + S
Sbjct: 67 IQRLQNKLGQHSNHKFYLFKVLRAHILPLTNVALNKSGSCFITGSYDRTCKLWDTA--SG 124
Query: 785 KRAFKYIQEAEMLRSISFH-PSGDFILVGTQHPTLRLYDINTFQCFVSCNPQDQHTDAIC 961
+ ++ +I+F+ P GD I G+ T +L+ + T +C+ + HT I
Sbjct: 125 EELHTLEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSVETGKCYHTFRG---HTAEIV 181
Query: 962 SVNYNPSAHMYVTGSRTAASNM 1027
+++NP + + TGS + +
Sbjct: 182 CLSFNPQSTLVATGSMDTTAKL 203
>ref|NP_001092501.1| WD repeat-containing protein 51B [Bos taurus].
Length = 478
Score = 59.7 bits (143), Expect = 4e-09
Identities = 42/176 (23%), Positives = 72/176 (40%)
Frame = +2
Query: 479 SHKGPCRVATYSRDGQLIATGSADASIKILDTERMLAKSAMPIEVMMNETAQQNMENHPV 658
+H P R +S DGQ +A+ S D SIK+ NM
Sbjct: 100 AHTAPVRSVDFSADGQFLASASEDKSIKVW-----------------------NMYRQRF 136
Query: 659 IRTLYDHVDEVTCLAFHPTEQILASGSRDYTLKLFDYSKPSAKRAFKYIQEAEMLRSISF 838
+ +LY H V C F P +++ S S D T+K++D + F ++F
Sbjct: 137 LYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFS--DFVGFANFVAF 194
Query: 839 HPSGDFILVGTQHPTLRLYDINTFQCFVSCNPQDQHTDAICSVNYNPSAHMYVTGS 1006
+P+G I T++++DI + H+ + V+++PS + +T S
Sbjct: 195 NPNGTCIASAGSDHTVKIWDIRVNKLL---QHYQVHSGGVNCVSFHPSGNYLITAS 247
>ref|XP_001251626.3| PREDICTED: WD repeat domain 51B-like, partial [Bos taurus].
Length = 371
Score = 59.7 bits (143), Expect = 4e-09
Identities = 42/176 (23%), Positives = 72/176 (40%)
Frame = +2
Query: 479 SHKGPCRVATYSRDGQLIATGSADASIKILDTERMLAKSAMPIEVMMNETAQQNMENHPV 658
+H P R +S DGQ +A+ S D SIK+ NM
Sbjct: 100 AHTAPVRSVDFSADGQFLASASEDKSIKVW-----------------------NMYRQRF 136
Query: 659 IRTLYDHVDEVTCLAFHPTEQILASGSRDYTLKLFDYSKPSAKRAFKYIQEAEMLRSISF 838
+ +LY H V C F P +++ S S D T+K++D + F ++F
Sbjct: 137 LYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFS--DFVGFANFVAF 194
Query: 839 HPSGDFILVGTQHPTLRLYDINTFQCFVSCNPQDQHTDAICSVNYNPSAHMYVTGS 1006
+P+G I T++++DI + H+ + V+++PS + +T S
Sbjct: 195 NPNGTCIASAGSDHTVKIWDIRVNKLL---QHYQVHSGGVNCVSFHPSGNYLITAS 247
>ref|XP_002685607.1| PREDICTED: sperm associated antigen 16 [Bos taurus].
Length = 628
Score = 58.9 bits (141), Expect = 7e-09
Identities = 35/117 (29%), Positives = 63/117 (53%)
Frame = +2
Query: 656 VIRTLYDHVDEVTCLAFHPTEQILASGSRDYTLKLFDYSKPSAKRAFKYIQEAEMLRSIS 835
V+ T H D ++ FHP+ LA+ S D T+KL+D SK + F+ + S +
Sbjct: 383 VLLTGLGHTDWLSNCCFHPSGNKLATSSGDTTVKLWDVSKGNCILTFE--GHTHAVWSCT 440
Query: 836 FHPSGDFILVGTQHPTLRLYDINTFQCFVSCNPQDQHTDAICSVNYNPSAHMYVTGS 1006
+H GDF+ + T +++D+N+ +C + HTD++ S+ + P ++ +TGS
Sbjct: 441 WHSCGDFVASSSLDTTSKIWDVNSERCRYTLY---GHTDSVNSIEFFPYSNTLLTGS 494
>ref|XP_002686202.1| PREDICTED: guanine nucleotide-binding protein, beta-5 subunit-like
[Bos taurus].
Length = 920
Score = 58.2 bits (139), Expect = 1e-08
Identities = 50/206 (24%), Positives = 86/206 (41%), Gaps = 31/206 (15%)
Frame = +2
Query: 482 HKGPCRVATYSRDGQLIATGSADASIKILDTERMLAKSAMP-IEVMMNETAQQNM----- 643
HKG +S GQL+ATGS D +K+L + P +E M++ +++
Sbjct: 661 HKGSIYCVAWSPCGQLLATGSNDKYVKVLPFNAETCNATGPDLEFSMHDGTIRDLAFMEG 720
Query: 644 -----------------------ENHPVIRTLYDHVDEVTCLAFHPTEQILASGSRDYTL 754
+ + L H + L + + ++ASGS+D T+
Sbjct: 721 PESGGAILISAGAGDCNIYTTDCQRGQGLHALSGHTGHILAL-YTWSGWMIASGSQDKTV 779
Query: 755 KLFDYSKPSAKRAF--KYIQEAEMLRSISFHPSGDFILVGTQHPTLRLYDINTFQCFVSC 928
+ +D PS R + + S++ PSG + G + + LYDI + S
Sbjct: 780 RFWDLRVPSCVRVVGTTFHGTGSAVASVAVDPSGRLLATGQEDSSCMLYDIRGGRMVQSY 839
Query: 929 NPQDQHTDAICSVNYNPSAHMYVTGS 1006
+P H+ + SV ++P AH +TGS
Sbjct: 840 HP---HSSDVRSVRFSPGAHYLLTGS 862
Database: RefSeq49_BP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 17,681,374
Number of sequences in database: 33,088
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33088
Number of Hits to DB: 38,317,756
Number of extensions: 968724
Number of successful extensions: 3207
Number of sequences better than 1.0e-05: 29
Number of HSP's gapped: 3066
Number of HSP's successfully gapped: 34
Length of query: 349
Length of database: 17,681,374
Length adjustment: 103
Effective length of query: 246
Effective length of database: 14,273,310
Effective search space: 3511234260
Effective search space used: 3511234260
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)
Search to RefSeqSP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-013611
(1047 letters)
Database: RefSeq49_SP.fasta
24,897 sequences; 11,343,932 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001103900.1| cleavage stimulation factor subunit 1 [Sus s... 566 e-162
Alignment gi|XP_003132294.2| PREDICTED: POC1 centriolar protein homolog A... 65 5e-11
Alignment gi|XP_001929370.2| PREDICTED: transcription initiation factor T... 62 5e-10
Alignment gi|XP_003133751.2| PREDICTED: WD repeat-containing protein 69-l... 59 3e-09
Alignment gi|XP_001926684.3| PREDICTED: WD repeat-containing protein 47 i... 58 8e-09
Alignment gi|XP_003360782.1| PREDICTED: POC1 centriolar protein homolog B... 58 1e-08
Alignment gi|NP_999415.1| platelet-activating factor acetylhydrolase IB s... 56 3e-08
Alignment gi|XP_001927989.1| PREDICTED: TAF5-like RNA polymerase II p300/... 55 8e-08
Alignment gi|XP_003127012.2| PREDICTED: katanin p80 WD40-containing subun... 55 8e-08
Alignment gi|NP_001121929.1| pre-mRNA-processing factor 19 [Sus scrofa]. 53 3e-07
>ref|NP_001103900.1| cleavage stimulation factor subunit 1 [Sus scrofa].
Length = 431
Score = 567 bits (1460), Expect = e-162
Identities = 280/282 (99%), Positives = 282/282 (100%)
Frame = +2
Query: 164 MYRTKVGLKDRQQLYKLIISQLLYDGYISIANGLINEIKPQSVCAPSEQLLHLIKLGMEN 343
MYRTKVGLKDRQQLYKLIISQLLYDGYISIANGLINEIKPQSVCAPSEQLLHLIKLGMEN
Sbjct: 1 MYRTKVGLKDRQQLYKLIISQLLYDGYISIANGLINEIKPQSVCAPSEQLLHLIKLGMEN 60
Query: 344 DDTAVQYAIGRSDTVAPGTGIDLEFDADVQTMSPEASEYETCYVTSHKGPCRVATYSRDG 523
DDTAVQYAIGRSDTVAPGTGIDLEFDADVQTMSPEASEYETCYVTSHKGPCRVATYSRDG
Sbjct: 61 DDTAVQYAIGRSDTVAPGTGIDLEFDADVQTMSPEASEYETCYVTSHKGPCRVATYSRDG 120
Query: 524 QLIATGSADASIKILDTERMLAKSAMPIEVMMNETAQQNMENHPVIRTLYDHVDEVTCLA 703
QLIATGSADASIKILDTERMLAKSAMPIEVMMNETAQQNMENHPVIRTLYDHVDEVTCLA
Sbjct: 121 QLIATGSADASIKILDTERMLAKSAMPIEVMMNETAQQNMENHPVIRTLYDHVDEVTCLA 180
Query: 704 FHPTEQILASGSRDYTLKLFDYSKPSAKRAFKYIQEAEMLRSISFHPSGDFILVGTQHPT 883
FHPTEQILASGSRDYTLKLFDYSKPSAKRAFKYIQEAEMLRSISFHPSGDFILVGTQHPT
Sbjct: 181 FHPTEQILASGSRDYTLKLFDYSKPSAKRAFKYIQEAEMLRSISFHPSGDFILVGTQHPT 240
Query: 884 LRLYDINTFQCFVSCNPQDQHTDAICSVNYNPSAHMYVTGSR 1009
LRLYDINTFQCFVSCNPQDQHTDAICSVNYNPSA+MYVTGS+
Sbjct: 241 LRLYDINTFQCFVSCNPQDQHTDAICSVNYNPSANMYVTGSK 282
>ref|XP_003132294.2| PREDICTED: POC1 centriolar protein homolog A-like [Sus scrofa].
Length = 344
Score = 65.5 bits (158), Expect = 5e-11
Identities = 44/182 (24%), Positives = 77/182 (42%)
Frame = +2
Query: 461 ETCYVTSHKGPCRVATYSRDGQLIATGSADASIKILDTERMLAKSAMPIEVMMNETAQQN 640
E+ +H R + DGQ T S D +IK+ T R
Sbjct: 95 ESTVFRAHTATVRSVHFCSDGQSFVTASDDKTIKVWSTHRQ------------------- 135
Query: 641 MENHPVIRTLYDHVDEVTCLAFHPTEQILASGSRDYTLKLFDYSKPSAKRAFKYIQEAEM 820
+ +L H++ V C F P +++ S S D T+KL+D K S + Y +
Sbjct: 136 ----KFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWD--KTSRECVHSYCEHGGF 189
Query: 821 LRSISFHPSGDFILVGTQHPTLRLYDINTFQCFVSCNPQDQHTDAICSVNYNPSAHMYVT 1000
+ + FHPSG + T++++D+ T + H+ A+ +++++PS + VT
Sbjct: 190 VTYVDFHPSGTCVAAAGMDNTVKVWDVRTHRLL---QHYQLHSAAVNALSFHPSGNYLVT 246
Query: 1001 GS 1006
S
Sbjct: 247 AS 248
Score = 52.4 bits (124), Expect = 4e-07
Identities = 35/144 (24%), Positives = 71/144 (49%), Gaps = 1/144 (0%)
Frame = +2
Query: 473 VTSHKGPCRVATYSRDGQLIATGSADASIKILDTERMLAKSAMPIEVMMNETAQQNMENH 652
++ H R A +S DG+LI + S D ++K+ D +T+++
Sbjct: 141 LSQHINWVRCAKFSPDGRLIVSASDDKTVKLWD-----------------KTSRE----- 178
Query: 653 PVIRTLYDHVDEVTCLAFHPTEQILASGSRDYTLKLFDYSKPSAKRAFKYIQ-EAEMLRS 829
+ + +H VT + FHP+ +A+ D T+K++D R ++ Q + + +
Sbjct: 179 -CVHSYCEHGGFVTYVDFHPSGTCVAAAGMDNTVKVWDVR---THRLLQHYQLHSAAVNA 234
Query: 830 ISFHPSGDFILVGTQHPTLRLYDI 901
+SFHPSG++++ + TL++ D+
Sbjct: 235 LSFHPSGNYLVTASSDSTLKILDL 258
>ref|XP_001929370.2| PREDICTED: transcription initiation factor TFIID subunit 5 [Sus
scrofa].
Length = 662
Score = 62.0 bits (149), Expect = 5e-10
Identities = 47/220 (21%), Positives = 88/220 (40%), Gaps = 19/220 (8%)
Frame = +2
Query: 404 IDLEFDADVQTMSPEASEYETCYVTSHKGPCRVATYSRDGQLIATGSADASIKILDTERM 583
ID E D ++ + E + E + H GP A++S D + + S D ++++ +
Sbjct: 378 IDKESDDVLERIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTF 437
Query: 584 LA-------------KSAMPIEVMMNETAQQNM------ENHPVIRTLYDHVDEVTCLAF 706
P + +++ +R H+ +V C F
Sbjct: 438 TCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRF 497
Query: 707 HPTEQILASGSRDYTLKLFDYSKPSAKRAFKYIQEAEMLRSISFHPSGDFILVGTQHPTL 886
HP +A+GS D T++L+D + R F + S++F P+G F+ G +
Sbjct: 498 HPNSNYVATGSADRTVRLWDVLNGNCVRIF--TGHKGPIHSLTFSPNGRFLATGATDGRV 555
Query: 887 RLYDINTFQCFVSCNPQDQHTDAICSVNYNPSAHMYVTGS 1006
L+DI + HTD +CS+ ++ + +GS
Sbjct: 556 LLWDIGH---GLMVGELKGHTDTVCSLRFSRDGEILASGS 592
>ref|XP_003133751.2| PREDICTED: WD repeat-containing protein 69-like [Sus scrofa].
Length = 271
Score = 59.3 bits (142), Expect = 3e-09
Identities = 49/178 (27%), Positives = 75/178 (42%)
Frame = +2
Query: 503 ATYSRDGQLIATGSADASIKILDTERMLAKSAMPIEVMMNETAQQNMENHPVIRTLYDHV 682
A ++ D LI TGS D + + D N + TL H
Sbjct: 123 ALFNWDCSLILTGSMDKTCMLWDAT-----------------------NEKCVATLTCHD 159
Query: 683 DEVTCLAFHPTEQILASGSRDYTLKLFDYSKPSAKRAFKYIQEAEMLRSISFHPSGDFIL 862
DE+ F T +++A+ S D T ++F S + K K + ISF+P G+ +L
Sbjct: 160 DEILDSCFDYTGKLIATASADGTARVF--SAATRKCITKLEGHEGEISKISFNPQGNRLL 217
Query: 863 VGTQHPTLRLYDINTFQCFVSCNPQDQHTDAICSVNYNPSAHMYVTGSRTAASNMGWR 1036
G+ T R++D T QC + HTD I S +N + +TGS+ + WR
Sbjct: 218 TGSADKTARIWDAQTGQCL---QVLEGHTDEIFSCAFNYKGDIIITGSKDNTCRI-WR 271
>ref|XP_001926684.3| PREDICTED: WD repeat-containing protein 47 isoform 1 [Sus scrofa].
Length = 633
Score = 58.2 bits (139), Expect = 8e-09
Identities = 50/206 (24%), Positives = 86/206 (41%), Gaps = 31/206 (15%)
Frame = +2
Query: 482 HKGPCRVATYSRDGQLIATGSADASIKILDTERMLAKSAMP-IEVMMNETAQQNM----- 643
HKG +S GQL+ATGS D +K+L + P +E M++ +++
Sbjct: 374 HKGSIYCVAWSPCGQLLATGSNDKYVKVLPFNAETCNATGPDLEFSMHDGTIRDLAFMEG 433
Query: 644 -----------------------ENHPVIRTLYDHVDEVTCLAFHPTEQILASGSRDYTL 754
+ + L H + L + + ++ASGS+D T+
Sbjct: 434 PESGGAILISAGAGDCNIYTTDCQRGQGLHALSGHTGHILAL-YTWSGWMIASGSQDKTV 492
Query: 755 KLFDYSKPSAKRAF--KYIQEAEMLRSISFHPSGDFILVGTQHPTLRLYDINTFQCFVSC 928
+ +D PS R + + S++ PSG + G + + LYDI + S
Sbjct: 493 RFWDLRVPSCVRVVGTTFHGTGSAVASVAVDPSGRLLATGQEDSSCMLYDIRGGRMVQSY 552
Query: 929 NPQDQHTDAICSVNYNPSAHMYVTGS 1006
+P H+ + SV ++P AH +TGS
Sbjct: 553 HP---HSSDVRSVRFSPGAHYLLTGS 575
>ref|XP_003360782.1| PREDICTED: POC1 centriolar protein homolog B-like, partial [Sus
scrofa].
Length = 416
Score = 57.8 bits (138), Expect = 1e-08
Identities = 46/210 (21%), Positives = 91/210 (43%), Gaps = 23/210 (10%)
Frame = +2
Query: 479 SHKGPCRVATYSRDGQLIATGSADASIKILDTERM--------------LAKSAMPIEVM 616
+H P R +S DGQ +AT S D SI R AK + ++
Sbjct: 145 AHTAPVRSVDFSADGQFLATASEDKSIXXXXXHRQRFLYSLYRHTHWVRCAKFSPDGRLI 204
Query: 617 MNETAQQNME-----NHPVIRTLYDHVDEVTCLAFHPTEQILASGSRDYTLKLFDYSKPS 781
++ + + ++ N + D V + F+P +AS D+T+K++D
Sbjct: 205 VSCSEDKTIKIWDTTNKQCVNNFSDFVGFANFVDFNPNGTCIASAGSDHTVKIWDI---- 260
Query: 782 AKRAFKYIQEAEM----LRSISFHPSGDFILVGTQHPTLRLYDINTFQCFVSCNPQDQHT 949
R K +Q ++ + +SFHPSG++++ + TL++ D+ + + HT
Sbjct: 261 --RVNKLLQHYQVHSGGVNCVSFHPSGNYLITASSDGTLKILDLLEGRLIYTL---QGHT 315
Query: 950 DAICSVNYNPSAHMYVTGSRTAASNMGWRS 1039
+ +V+++ ++ +G A + WR+
Sbjct: 316 GPVFTVSFSKGGELFTSGGADAQVLL-WRT 344
>ref|NP_999415.1| platelet-activating factor acetylhydrolase IB subunit alpha [Sus
scrofa].
Length = 410
Score = 56.2 bits (134), Expect = 3e-08
Identities = 47/180 (26%), Positives = 83/180 (46%), Gaps = 3/180 (1%)
Frame = +2
Query: 476 TSHKGPCRVATYSRDGQLIATGSADASIKILDTERMLAKSAMPIEVMMNETAQQNMENHP 655
T H+ R+ ++DG LIA+ S D ++++ ++A E+ +E + + P
Sbjct: 231 TGHREWVRMVRPNQDGTLIASCSNDQTVRVW----VVATKECKAELREHEHVVECISWAP 286
Query: 656 VIRTLYDHVDEVTCLAFHPTEQ---ILASGSRDYTLKLFDYSKPSAKRAFKYIQEAEMLR 826
+ Y + E T + + L SGSRD T+K++D S + + +R
Sbjct: 287 --ESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVS--TGMCLMTLVGHDNWVR 342
Query: 827 SISFHPSGDFILVGTQHPTLRLYDINTFQCFVSCNPQDQHTDAICSVNYNPSAHMYVTGS 1006
+ FH G FIL TLR++D +C + N H + S++++ +A VTGS
Sbjct: 343 GVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLN---AHEHFVTSLDFHKTAPYVVTGS 399
Score = 55.1 bits (131), Expect = 6e-08
Identities = 40/163 (24%), Positives = 69/163 (42%), Gaps = 15/163 (9%)
Frame = +2
Query: 584 LAKSAMPIEVMMNETAQQNMENHPVIR---------------TLYDHVDEVTCLAFHPTE 718
L K M +E +NE ++ P+ + L H VT + FHP
Sbjct: 61 LQKKVMELESKLNEAKEEFTSGGPLGQKRDPKEWIPRPPEKYALSGHRSPVTRVIFHPVF 120
Query: 719 QILASGSRDYTLKLFDYSKPSAKRAFKYIQEAEMLRSISFHPSGDFILVGTQHPTLRLYD 898
++ S S D T+K++DY +R K + ++ ISF SG + + T++L+D
Sbjct: 121 SVMVSASEDATIKVWDYETGDFERTLK--GHTDSVQDISFDHSGKLLASCSADMTIKLWD 178
Query: 899 INTFQCFVSCNPQDQHTDAICSVNYNPSAHMYVTGSRTAASNM 1027
F+C + + D + + SV P+ V+ +R M
Sbjct: 179 FQGFECIRTMHGHDHN---VSSVAIMPNGDHIVSAARDKTIKM 218
>ref|XP_001927989.1| PREDICTED: TAF5-like RNA polymerase II p300/CBP-associated
factor-associated factor 65 kDa subunit 5L [Sus scrofa].
Length = 589
Score = 54.7 bits (130), Expect = 8e-08
Identities = 31/116 (26%), Positives = 59/116 (50%)
Frame = +2
Query: 659 IRTLYDHVDEVTCLAFHPTEQILASGSRDYTLKLFDYSKPSAKRAFKYIQEAEMLRSISF 838
+R H+ +V C+ FHP LA+GS D T++L+ + ++ R F + S++F
Sbjct: 419 LRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLF--TGHRGPVLSLAF 476
Query: 839 HPSGDFILVGTQHPTLRLYDINTFQCFVSCNPQDQHTDAICSVNYNPSAHMYVTGS 1006
P+G ++ + L+L+D+ + F HTD I S+ ++P + + + S
Sbjct: 477 SPNGKYLASAGEDQRLKLWDLASGTLFKELR---GHTDNITSLTFSPDSSLIASAS 529
>ref|XP_003127012.2| PREDICTED: katanin p80 WD40-containing subunit B1 [Sus scrofa].
Length = 561
Score = 54.7 bits (130), Expect = 8e-08
Identities = 42/148 (28%), Positives = 64/148 (43%)
Frame = +2
Query: 476 TSHKGPCRVATYSRDGQLIATGSADASIKILDTERMLAKSAMPIEVMMNETAQQNMENHP 655
T H R +S DG+ +A+ + D ++K+ D TA + M P
Sbjct: 49 TGHSQAVRCLRFSPDGKWLASAADDHTVKLWDL-----------------TAGKMMSEFP 91
Query: 656 VIRTLYDHVDEVTCLAFHPTEQILASGSRDYTLKLFDYSKPSAKRAFKYIQEAEMLRSIS 835
H V + FHP E +LASGS D T++ +D K + E +RS+
Sbjct: 92 ------GHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIE--GEPGPVRSVL 143
Query: 836 FHPSGDFILVGTQHPTLRLYDINTFQCF 919
F+P G + G Q +LR+Y +CF
Sbjct: 144 FNPDGCCLYSGCQ-DSLRVYGWEPERCF 170
>ref|NP_001121929.1| pre-mRNA-processing factor 19 [Sus scrofa].
Length = 504
Score = 52.8 bits (125), Expect = 3e-07
Identities = 32/146 (21%), Positives = 70/146 (47%)
Frame = +2
Query: 569 DTERMLAKSAMPIEVMMNETAQQNMENHPVIRTLYDHVDEVTCLAFHPTEQILASGSRDY 748
DT ++L A V+ +++++Q ++ TL H +VT + FHP+++++ S S D
Sbjct: 233 DTNKILTGGADKNVVVFDKSSEQ------ILATLKGHTKKVTSVVFHPSQELVFSASPDA 286
Query: 749 TLKLFDYSKPSAKRAFKYIQEAEMLRSISFHPSGDFILVGTQHPTLRLYDINTFQCFVSC 928
T++++ S + + + A + +S H +GD++L + DI T +
Sbjct: 287 TIRIWSVPNASCVQVVRAHESA--VTGLSLHATGDYLLSSSDDQYWAFSDIQTGRVLTKV 344
Query: 929 NPQDQHTDAICSVNYNPSAHMYVTGS 1006
+ C+ ++P ++ TG+
Sbjct: 345 TDETSGCSLTCA-QFHPDGLIFGTGT 369
Database: RefSeq49_SP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 11,343,932
Number of sequences in database: 24,897
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 24897
Number of Hits to DB: 24,600,701
Number of extensions: 618189
Number of successful extensions: 2119
Number of sequences better than 1.0e-05: 16
Number of HSP's gapped: 2012
Number of HSP's successfully gapped: 20
Length of query: 349
Length of database: 11,343,932
Length adjustment: 100
Effective length of query: 249
Effective length of database: 8,854,232
Effective search space: 2204703768
Effective search space used: 2204703768
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)
Search to RefSeqMP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-013611
(1047 letters)
Database: RefSeq49_MP.fasta
30,036 sequences; 15,617,559 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_077161.1| cleavage stimulation factor subunit 1 [Mus musc... 566 e-162
Alignment gi|NP_083081.2| katanin p80 WD40-containing subunit B1 [Mus mus... 65 1e-10
Alignment gi|NP_081630.2| POC1 centriolar protein homolog A [Mus musculus]. 64 3e-10
Alignment gi|NP_796316.2| transcription initiation factor TFIID subunit 5... 62 7e-10
Alignment gi|NP_082001.2| WD repeat domain 69 [Mus musculus]. 60 3e-09
Alignment gi|NP_083963.1| WD repeat-containing protein 38 [Mus musculus]. 58 1e-08
Alignment gi|NP_852065.2| WD repeat-containing protein 47 [Mus musculus]. 58 1e-08
Alignment gi|NP_038653.1| platelet-activating factor acetylhydrolase IB s... 56 4e-08
Alignment gi|NP_598727.1| TAF5-like RNA polymerase II p300/CBP-associated... 56 5e-08
Alignment gi|NP_083436.2| sperm-associated antigen 16 protein isoform 1 [... 54 2e-07
>ref|NP_077161.1| cleavage stimulation factor subunit 1 [Mus musculus].
Length = 431
Score = 567 bits (1460), Expect = e-162
Identities = 280/282 (99%), Positives = 282/282 (100%)
Frame = +2
Query: 164 MYRTKVGLKDRQQLYKLIISQLLYDGYISIANGLINEIKPQSVCAPSEQLLHLIKLGMEN 343
MYRTKVGLKDRQQLYKLIISQLLYDGYISIANGLINEIKPQSVCAPSEQLLHLIKLGMEN
Sbjct: 1 MYRTKVGLKDRQQLYKLIISQLLYDGYISIANGLINEIKPQSVCAPSEQLLHLIKLGMEN 60
Query: 344 DDTAVQYAIGRSDTVAPGTGIDLEFDADVQTMSPEASEYETCYVTSHKGPCRVATYSRDG 523
DDTAVQYAIGRSDTVAPGTGIDLEFDADVQTMSPEASEYETCYVTSHKGPCRVATYSRDG
Sbjct: 61 DDTAVQYAIGRSDTVAPGTGIDLEFDADVQTMSPEASEYETCYVTSHKGPCRVATYSRDG 120
Query: 524 QLIATGSADASIKILDTERMLAKSAMPIEVMMNETAQQNMENHPVIRTLYDHVDEVTCLA 703
QLIATGSADASIKILDTERMLAKSAMPIEVMMNETAQQNMENHPVIRTLYDHVDEVTCLA
Sbjct: 121 QLIATGSADASIKILDTERMLAKSAMPIEVMMNETAQQNMENHPVIRTLYDHVDEVTCLA 180
Query: 704 FHPTEQILASGSRDYTLKLFDYSKPSAKRAFKYIQEAEMLRSISFHPSGDFILVGTQHPT 883
FHPTEQILASGSRDYTLKLFDYSKPSAKRAFKYIQEAEMLRSISFHPSGDFILVGTQHPT
Sbjct: 181 FHPTEQILASGSRDYTLKLFDYSKPSAKRAFKYIQEAEMLRSISFHPSGDFILVGTQHPT 240
Query: 884 LRLYDINTFQCFVSCNPQDQHTDAICSVNYNPSAHMYVTGSR 1009
LRLYDINTFQCFVSCNPQDQHTDAICSVNYNPSA+MYVTGS+
Sbjct: 241 LRLYDINTFQCFVSCNPQDQHTDAICSVNYNPSANMYVTGSK 282
>ref|NP_083081.2| katanin p80 WD40-containing subunit B1 [Mus musculus].
Length = 658
Score = 64.7 bits (156), Expect = 1e-10
Identities = 42/178 (23%), Positives = 77/178 (43%)
Frame = +2
Query: 473 VTSHKGPCRVATYSRDGQLIATGSADASIKILDTERMLAKSAMPIEVMMNETAQQNMENH 652
+T H P + +LI GS SI++ D +E
Sbjct: 59 LTGHTSPVESVRLNTPEELIVAGSQSGSIRVWD-----------------------LEAA 95
Query: 653 PVIRTLYDHVDEVTCLAFHPTEQILASGSRDYTLKLFDYSKPSAKRAFKYIQEAEMLRSI 832
++RTL H + L FHP + +ASGS+D +KL+D + F+Y ++ +R +
Sbjct: 96 KILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGC--VFRYRGHSQAVRCL 153
Query: 833 SFHPSGDFILVGTQHPTLRLYDINTFQCFVSCNPQDQHTDAICSVNYNPSAHMYVTGS 1006
F P G ++ T++L+D+ + + HT + V ++P+ ++ +GS
Sbjct: 154 RFSPDGKWLASAADDHTVKLWDLTAGKMM---SEFPGHTGPVNVVEFHPNEYLLASGS 208
Score = 52.8 bits (125), Expect = 5e-07
Identities = 41/146 (28%), Positives = 63/146 (43%)
Frame = +2
Query: 482 HKGPCRVATYSRDGQLIATGSADASIKILDTERMLAKSAMPIEVMMNETAQQNMENHPVI 661
H R +S DG+ +A+ + D ++K+ D TA + M P
Sbjct: 146 HSQAVRCLRFSPDGKWLASAADDHTVKLWDL-----------------TAGKMMSEFP-- 186
Query: 662 RTLYDHVDEVTCLAFHPTEQILASGSRDYTLKLFDYSKPSAKRAFKYIQEAEMLRSISFH 841
H V + FHP E +LASGS D T++ +D K + E +RS+ F+
Sbjct: 187 ----GHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIE--GEPGPVRSVLFN 240
Query: 842 PSGDFILVGTQHPTLRLYDINTFQCF 919
P G + G Q +LR+Y +CF
Sbjct: 241 PDGCCLYSGCQ-DSLRVYGWEPERCF 265
>ref|NP_081630.2| POC1 centriolar protein homolog A [Mus musculus].
Length = 405
Score = 63.5 bits (153), Expect = 3e-10
Identities = 43/182 (23%), Positives = 77/182 (42%)
Frame = +2
Query: 461 ETCYVTSHKGPCRVATYSRDGQLIATGSADASIKILDTERMLAKSAMPIEVMMNETAQQN 640
E+ +H R + DGQ + T S D ++K+ T R
Sbjct: 95 ESTVFRAHTATVRSVHFCSDGQSLVTASDDKTVKVWSTHRQR------------------ 136
Query: 641 MENHPVIRTLYDHVDEVTCLAFHPTEQILASGSRDYTLKLFDYSKPSAKRAFKYIQEAEM 820
+ +L H++ V C F P +++ S S D T+KL+D K S + Y +
Sbjct: 137 -----FLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWD--KTSRECIHSYCEHGGF 189
Query: 821 LRSISFHPSGDFILVGTQHPTLRLYDINTFQCFVSCNPQDQHTDAICSVNYNPSAHMYVT 1000
+ + FHPSG I T++++D T + H+ A+ +++++PS + +T
Sbjct: 190 VTYVDFHPSGTCIAAAGMDNTVKVWDARTHRLL---QHYQLHSAAVNALSFHPSGNYLIT 246
Query: 1001 GS 1006
S
Sbjct: 247 AS 248
Score = 55.1 bits (131), Expect = 9e-08
Identities = 37/147 (25%), Positives = 72/147 (48%), Gaps = 4/147 (2%)
Frame = +2
Query: 473 VTSHKGPCRVATYSRDGQLIATGSADASIKILDTERMLAKSAMPIEVMMNETAQQNMENH 652
+T H R A +S DG+LI + S D ++K+ D +T+++
Sbjct: 141 LTQHINWVRCAKFSPDGRLIVSASDDKTVKLWD-----------------KTSRE----- 178
Query: 653 PVIRTLYDHVDEVTCLAFHPTEQILASGSRDYTLKLFDYSKPSAKRAFKYIQEAEM---- 820
I + +H VT + FHP+ +A+ D T+K++D R + +Q ++
Sbjct: 179 -CIHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWD------ARTHRLLQHYQLHSAA 231
Query: 821 LRSISFHPSGDFILVGTQHPTLRLYDI 901
+ ++SFHPSG++++ + TL++ D+
Sbjct: 232 VNALSFHPSGNYLITASSDSTLKILDL 258
Score = 49.3 bits (116), Expect = 5e-06
Identities = 36/126 (28%), Positives = 61/126 (48%)
Frame = +2
Query: 629 AQQNMENHPVIRTLYDHVDEVTCLAFHPTEQILASGSRDYTLKLFDYSKPSAKRAFKYIQ 808
A + E+ + R H D VTC+ F + LASGS D TL ++ + KP + RA+++
Sbjct: 2 AAPSQEDPSLERHFKGHRDAVTCVDFSLNTKHLASGSMDSTLMIW-HMKPQS-RAYRFTG 59
Query: 809 EAEMLRSISFHPSGDFILVGTQHPTLRLYDINTFQCFVSCNPQDQHTDAICSVNYNPSAH 988
+ + ++F PSG + G++ T+R++ N HT + SV++
Sbjct: 60 HKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKG---ESTVFRAHTATVRSVHFCSDGQ 116
Query: 989 MYVTGS 1006
VT S
Sbjct: 117 SLVTAS 122
>ref|NP_796316.2| transcription initiation factor TFIID subunit 5 [Mus musculus].
Length = 801
Score = 62.0 bits (149), Expect = 7e-10
Identities = 47/220 (21%), Positives = 88/220 (40%), Gaps = 19/220 (8%)
Frame = +2
Query: 404 IDLEFDADVQTMSPEASEYETCYVTSHKGPCRVATYSRDGQLIATGSADASIKILDTERM 583
ID E D ++ + E + E + H GP A++S D + + S D ++++ +
Sbjct: 517 IDKESDDVLERIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTF 576
Query: 584 LA-------------KSAMPIEVMMNETAQQNM------ENHPVIRTLYDHVDEVTCLAF 706
P + +++ +R H+ +V C F
Sbjct: 577 TCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRF 636
Query: 707 HPTEQILASGSRDYTLKLFDYSKPSAKRAFKYIQEAEMLRSISFHPSGDFILVGTQHPTL 886
HP +A+GS D T++L+D + R F + S++F P+G F+ G +
Sbjct: 637 HPNSNYVATGSADRTVRLWDVLNGNCVRIF--TGHKGPIHSLTFSPNGRFLATGATDGRV 694
Query: 887 RLYDINTFQCFVSCNPQDQHTDAICSVNYNPSAHMYVTGS 1006
L+DI + HTD +CS+ ++ + +GS
Sbjct: 695 LLWDIGH---GLMVGELKGHTDTVCSLRFSRDGEILASGS 731
>ref|NP_082001.2| WD repeat domain 69 [Mus musculus].
Length = 310
Score = 60.1 bits (144), Expect = 3e-09
Identities = 38/126 (30%), Positives = 64/126 (50%)
Frame = +2
Query: 659 IRTLYDHVDEVTCLAFHPTEQILASGSRDYTLKLFDYSKPSAKRAFKYIQEAEMLRSISF 838
+ TL H DE+ F T +++A+ S D T ++ Y+ + K K + ISF
Sbjct: 191 VATLTGHDDEILDSCFDYTGKLIATASADGTARV--YNATTRKCVTKLEGHEGEISKISF 248
Query: 839 HPSGDFILVGTQHPTLRLYDINTFQCFVSCNPQDQHTDAICSVNYNPSAHMYVTGSRTAA 1018
+P G+ +L G+ T R++D+ T QC + HTD I S +N ++ +TGS+ +
Sbjct: 249 NPQGNRLLTGSSDKTARIWDVQTGQCL---QVLEGHTDEIFSCAFNYKGNIVITGSKDNS 305
Query: 1019 SNMGWR 1036
+ WR
Sbjct: 306 CRI-WR 310
>ref|NP_083963.1| WD repeat-containing protein 38 [Mus musculus].
Length = 303
Score = 58.2 bits (139), Expect = 1e-08
Identities = 41/170 (24%), Positives = 73/170 (42%)
Frame = +2
Query: 473 VTSHKGPCRVATYSRDGQLIATGSADASIKILDTERMLAKSAMPIEVMMNETAQQNMENH 652
+ H+GP + +S DG+LIA+ S+D SI++ D R
Sbjct: 64 LAGHRGPVKSCCFSPDGRLIASSSSDHSIRLWDVAR-----------------------S 100
Query: 653 PVIRTLYDHVDEVTCLAFHPTEQILASGSRDYTLKLFDYSKPSAKRAFKYIQEAEMLRSI 832
+ L H V ++F P + LASG D +++ S +R + + ++S
Sbjct: 101 KCLHVLKGHQRSVETVSFSPDSKQLASGGWDKRAIVWEVQ--SGRRVHLLVGHCDSIQSS 158
Query: 833 SFHPSGDFILVGTQHPTLRLYDINTFQCFVSCNPQDQHTDAICSVNYNPS 982
F P+ D + G+ T+ ++D+ VS + + HT I + Y+ S
Sbjct: 159 DFSPTSDSLATGSWDSTVHIWDLRASTPVVSYHNLEGHTGNISCLCYSAS 208
>ref|NP_852065.2| WD repeat-containing protein 47 [Mus musculus].
Length = 920
Score = 58.2 bits (139), Expect = 1e-08
Identities = 50/206 (24%), Positives = 86/206 (41%), Gaps = 31/206 (15%)
Frame = +2
Query: 482 HKGPCRVATYSRDGQLIATGSADASIKILDTERMLAKSAMP-IEVMMNETAQQNM----- 643
HKG +S GQL+ATGS D +K+L + P +E M++ +++
Sbjct: 661 HKGSIYCVAWSPCGQLLATGSNDKYVKVLPFNAETCNATGPDLEFSMHDGTIRDLAFMEG 720
Query: 644 -----------------------ENHPVIRTLYDHVDEVTCLAFHPTEQILASGSRDYTL 754
+ + L H + L + + ++ASGS+D T+
Sbjct: 721 PESGGAILISAGAGDCNIYTTDCQRGQGLHALSGHTGHILAL-YTWSGWMIASGSQDKTV 779
Query: 755 KLFDYSKPSAKRAF--KYIQEAEMLRSISFHPSGDFILVGTQHPTLRLYDINTFQCFVSC 928
+ +D PS R + + S++ PSG + G + + LYDI + S
Sbjct: 780 RFWDLRVPSCVRVVGTTFHGTGSAVASVAVDPSGRLLATGQEDSSCMLYDIRGGRMVQSY 839
Query: 929 NPQDQHTDAICSVNYNPSAHMYVTGS 1006
+P H+ + SV ++P AH +TGS
Sbjct: 840 HP---HSSDVRSVRFSPGAHYLLTGS 862
>ref|NP_038653.1| platelet-activating factor acetylhydrolase IB subunit alpha [Mus
musculus].
Length = 410
Score = 56.2 bits (134), Expect = 4e-08
Identities = 41/163 (25%), Positives = 69/163 (42%), Gaps = 15/163 (9%)
Frame = +2
Query: 584 LAKSAMPIEVMMNETAQQNMENHPVIR---------------TLYDHVDEVTCLAFHPTE 718
L K M +E +NE ++ P+ + L H VT + FHP
Sbjct: 61 LQKKVMELESKLNEAKEEFTSGGPLGQKRDPKEWIPRPPEKYALSGHRSPVTRVIFHPVF 120
Query: 719 QILASGSRDYTLKLFDYSKPSAKRAFKYIQEAEMLRSISFHPSGDFILVGTQHPTLRLYD 898
++ S S D T+K++DY +R K + ++ ISF SG + + T++L+D
Sbjct: 121 SVMVSASEDATIKVWDYETGDFERTLK--GHTDSVQDISFDHSGKLLASCSADMTIKLWD 178
Query: 899 INTFQCFVSCNPQDQHTDAICSVNYNPSAHMYVTGSRTAASNM 1027
F+C + + D + + SV P+ V+ SR M
Sbjct: 179 FQGFECIRTMHGHDHN---VSSVAIMPNGDHIVSASRDKTIKM 218
Score = 56.2 bits (134), Expect = 4e-08
Identities = 47/180 (26%), Positives = 83/180 (46%), Gaps = 3/180 (1%)
Frame = +2
Query: 476 TSHKGPCRVATYSRDGQLIATGSADASIKILDTERMLAKSAMPIEVMMNETAQQNMENHP 655
T H+ R+ ++DG LIA+ S D ++++ ++A E+ +E + + P
Sbjct: 231 TGHREWVRMVRPNQDGTLIASCSNDQTVRVW----VVATKECKAELREHEHVVECISWAP 286
Query: 656 VIRTLYDHVDEVTCLAFHPTEQ---ILASGSRDYTLKLFDYSKPSAKRAFKYIQEAEMLR 826
+ Y + E T + + L SGSRD T+K++D S + + +R
Sbjct: 287 --ESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVS--TGMCLMTLVGHDNWVR 342
Query: 827 SISFHPSGDFILVGTQHPTLRLYDINTFQCFVSCNPQDQHTDAICSVNYNPSAHMYVTGS 1006
+ FH G FIL TLR++D +C + N H + S++++ +A VTGS
Sbjct: 343 GVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLN---AHEHFVTSLDFHKTAPYVVTGS 399
>ref|NP_598727.1| TAF5-like RNA polymerase II p300/CBP-associated factor-associated
factor 65 kDa subunit 5L [Mus musculus].
Length = 589
Score = 55.8 bits (133), Expect = 5e-08
Identities = 32/116 (27%), Positives = 60/116 (51%)
Frame = +2
Query: 659 IRTLYDHVDEVTCLAFHPTEQILASGSRDYTLKLFDYSKPSAKRAFKYIQEAEMLRSISF 838
+R H+ +V C+ FHP LA+GS D T++L+ + ++ R F + S+SF
Sbjct: 419 LRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLF--TGHRGPVLSLSF 476
Query: 839 HPSGDFILVGTQHPTLRLYDINTFQCFVSCNPQDQHTDAICSVNYNPSAHMYVTGS 1006
P+G ++ + L+L+D+ + F HTD+I S+ ++P + + + S
Sbjct: 477 SPNGKYLASAGEDQRLKLWDLASGTLFKELR---GHTDSITSLAFSPDSGLIASAS 529
>ref|NP_083436.2| sperm-associated antigen 16 protein isoform 1 [Mus musculus].
Length = 639
Score = 54.3 bits (129), Expect = 2e-07
Identities = 33/117 (28%), Positives = 62/117 (52%)
Frame = +2
Query: 656 VIRTLYDHVDEVTCLAFHPTEQILASGSRDYTLKLFDYSKPSAKRAFKYIQEAEMLRSIS 835
V+ T H D ++ FHP+ LA+ S D T+KL+D +K + A + S +
Sbjct: 394 VLLTGSGHTDWLSGCCFHPSGSKLATSSGDSTIKLWDLNKGECTLTLEGHNHA--VWSCT 451
Query: 836 FHPSGDFILVGTQHPTLRLYDINTFQCFVSCNPQDQHTDAICSVNYNPSAHMYVTGS 1006
+H GDF+ + T +++D+N+ +C + HTD++ S+ + P +++ +T S
Sbjct: 452 WHSCGDFVASASLDMTSKIWDVNSERCRYTLY---GHTDSVNSIEFFPFSNILLTAS 505
Database: RefSeq49_MP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 15,617,559
Number of sequences in database: 30,036
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 30036
Number of Hits to DB: 33,660,189
Number of extensions: 847368
Number of successful extensions: 2804
Number of sequences better than 1.0e-05: 21
Number of HSP's gapped: 2668
Number of HSP's successfully gapped: 25
Length of query: 349
Length of database: 15,617,559
Length adjustment: 102
Effective length of query: 247
Effective length of database: 12,553,887
Effective search space: 3100810089
Effective search space used: 3100810089
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)
Search to RefSeqHP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-013611
(1047 letters)
Database: RefSeq49_HP.fasta
32,964 sequences; 18,297,164 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001028694.1| cleavage stimulation factor subunit 1 [Homo ... 563 e-161
Alignment gi|NP_001315.1| cleavage stimulation factor subunit 1 [Homo sap... 563 e-161
Alignment gi|NP_001028693.1| cleavage stimulation factor subunit 1 [Homo ... 563 e-161
Alignment gi|NP_849143.1| WD repeat-containing protein 69 [Homo sapiens]. 65 1e-10
Alignment gi|NP_005877.2| katanin p80 WD40-containing subunit B1 [Homo sa... 65 1e-10
Alignment gi|NP_001155053.1| POC1 centriolar protein homolog A isoform 3 ... 64 2e-10
Alignment gi|NP_001155052.1| POC1 centriolar protein homolog A isoform 2 ... 64 2e-10
Alignment gi|NP_056241.3| POC1 centriolar protein homolog A isoform 1 [Ho... 64 2e-10
Alignment gi|NP_008882.2| transcription initiation factor TFIID subunit 5... 62 9e-10
Alignment gi|NP_001186706.1| POC1 centriolar protein homolog B isoform b ... 60 3e-09
>ref|NP_001028694.1| cleavage stimulation factor subunit 1 [Homo sapiens].
Length = 431
Score = 563 bits (1452), Expect = e-161
Identities = 279/282 (98%), Positives = 281/282 (99%)
Frame = +2
Query: 164 MYRTKVGLKDRQQLYKLIISQLLYDGYISIANGLINEIKPQSVCAPSEQLLHLIKLGMEN 343
MYRTKVGLKDRQQLYKLIISQLLYDGYISIANGLINEIKPQSVCAPSEQLLHLIKLGMEN
Sbjct: 1 MYRTKVGLKDRQQLYKLIISQLLYDGYISIANGLINEIKPQSVCAPSEQLLHLIKLGMEN 60
Query: 344 DDTAVQYAIGRSDTVAPGTGIDLEFDADVQTMSPEASEYETCYVTSHKGPCRVATYSRDG 523
DDTAVQYAIGRSDTVAPGTGIDLEFDADVQTMSPEASEYETCYVTSHKGPCRVATYSRDG
Sbjct: 61 DDTAVQYAIGRSDTVAPGTGIDLEFDADVQTMSPEASEYETCYVTSHKGPCRVATYSRDG 120
Query: 524 QLIATGSADASIKILDTERMLAKSAMPIEVMMNETAQQNMENHPVIRTLYDHVDEVTCLA 703
QLIATGSADASIKILDTERMLAKSAMPIEVMMNETAQQNMENHPVIRTLYDHVDEVTCLA
Sbjct: 121 QLIATGSADASIKILDTERMLAKSAMPIEVMMNETAQQNMENHPVIRTLYDHVDEVTCLA 180
Query: 704 FHPTEQILASGSRDYTLKLFDYSKPSAKRAFKYIQEAEMLRSISFHPSGDFILVGTQHPT 883
FHPTEQILASGSRDYTLKLFDYSKPSAKRAFKYIQEAEMLRSISFHPSGDFILVGTQHPT
Sbjct: 181 FHPTEQILASGSRDYTLKLFDYSKPSAKRAFKYIQEAEMLRSISFHPSGDFILVGTQHPT 240
Query: 884 LRLYDINTFQCFVSCNPQDQHTDAICSVNYNPSAHMYVTGSR 1009
LRLYDINTFQCFVSCNPQDQHTDAICSVNYN SA+MYVTGS+
Sbjct: 241 LRLYDINTFQCFVSCNPQDQHTDAICSVNYNSSANMYVTGSK 282
>ref|NP_001315.1| cleavage stimulation factor subunit 1 [Homo sapiens].
Length = 431
Score = 563 bits (1452), Expect = e-161
Identities = 279/282 (98%), Positives = 281/282 (99%)
Frame = +2
Query: 164 MYRTKVGLKDRQQLYKLIISQLLYDGYISIANGLINEIKPQSVCAPSEQLLHLIKLGMEN 343
MYRTKVGLKDRQQLYKLIISQLLYDGYISIANGLINEIKPQSVCAPSEQLLHLIKLGMEN
Sbjct: 1 MYRTKVGLKDRQQLYKLIISQLLYDGYISIANGLINEIKPQSVCAPSEQLLHLIKLGMEN 60
Query: 344 DDTAVQYAIGRSDTVAPGTGIDLEFDADVQTMSPEASEYETCYVTSHKGPCRVATYSRDG 523
DDTAVQYAIGRSDTVAPGTGIDLEFDADVQTMSPEASEYETCYVTSHKGPCRVATYSRDG
Sbjct: 61 DDTAVQYAIGRSDTVAPGTGIDLEFDADVQTMSPEASEYETCYVTSHKGPCRVATYSRDG 120
Query: 524 QLIATGSADASIKILDTERMLAKSAMPIEVMMNETAQQNMENHPVIRTLYDHVDEVTCLA 703
QLIATGSADASIKILDTERMLAKSAMPIEVMMNETAQQNMENHPVIRTLYDHVDEVTCLA
Sbjct: 121 QLIATGSADASIKILDTERMLAKSAMPIEVMMNETAQQNMENHPVIRTLYDHVDEVTCLA 180
Query: 704 FHPTEQILASGSRDYTLKLFDYSKPSAKRAFKYIQEAEMLRSISFHPSGDFILVGTQHPT 883
FHPTEQILASGSRDYTLKLFDYSKPSAKRAFKYIQEAEMLRSISFHPSGDFILVGTQHPT
Sbjct: 181 FHPTEQILASGSRDYTLKLFDYSKPSAKRAFKYIQEAEMLRSISFHPSGDFILVGTQHPT 240
Query: 884 LRLYDINTFQCFVSCNPQDQHTDAICSVNYNPSAHMYVTGSR 1009
LRLYDINTFQCFVSCNPQDQHTDAICSVNYN SA+MYVTGS+
Sbjct: 241 LRLYDINTFQCFVSCNPQDQHTDAICSVNYNSSANMYVTGSK 282
>ref|NP_001028693.1| cleavage stimulation factor subunit 1 [Homo sapiens].
Length = 431
Score = 563 bits (1452), Expect = e-161
Identities = 279/282 (98%), Positives = 281/282 (99%)
Frame = +2
Query: 164 MYRTKVGLKDRQQLYKLIISQLLYDGYISIANGLINEIKPQSVCAPSEQLLHLIKLGMEN 343
MYRTKVGLKDRQQLYKLIISQLLYDGYISIANGLINEIKPQSVCAPSEQLLHLIKLGMEN
Sbjct: 1 MYRTKVGLKDRQQLYKLIISQLLYDGYISIANGLINEIKPQSVCAPSEQLLHLIKLGMEN 60
Query: 344 DDTAVQYAIGRSDTVAPGTGIDLEFDADVQTMSPEASEYETCYVTSHKGPCRVATYSRDG 523
DDTAVQYAIGRSDTVAPGTGIDLEFDADVQTMSPEASEYETCYVTSHKGPCRVATYSRDG
Sbjct: 61 DDTAVQYAIGRSDTVAPGTGIDLEFDADVQTMSPEASEYETCYVTSHKGPCRVATYSRDG 120
Query: 524 QLIATGSADASIKILDTERMLAKSAMPIEVMMNETAQQNMENHPVIRTLYDHVDEVTCLA 703
QLIATGSADASIKILDTERMLAKSAMPIEVMMNETAQQNMENHPVIRTLYDHVDEVTCLA
Sbjct: 121 QLIATGSADASIKILDTERMLAKSAMPIEVMMNETAQQNMENHPVIRTLYDHVDEVTCLA 180
Query: 704 FHPTEQILASGSRDYTLKLFDYSKPSAKRAFKYIQEAEMLRSISFHPSGDFILVGTQHPT 883
FHPTEQILASGSRDYTLKLFDYSKPSAKRAFKYIQEAEMLRSISFHPSGDFILVGTQHPT
Sbjct: 181 FHPTEQILASGSRDYTLKLFDYSKPSAKRAFKYIQEAEMLRSISFHPSGDFILVGTQHPT 240
Query: 884 LRLYDINTFQCFVSCNPQDQHTDAICSVNYNPSAHMYVTGSR 1009
LRLYDINTFQCFVSCNPQDQHTDAICSVNYN SA+MYVTGS+
Sbjct: 241 LRLYDINTFQCFVSCNPQDQHTDAICSVNYNSSANMYVTGSK 282
>ref|NP_849143.1| WD repeat-containing protein 69 [Homo sapiens].
Length = 415
Score = 64.7 bits (156), Expect = 1e-10
Identities = 50/178 (28%), Positives = 78/178 (43%)
Frame = +2
Query: 503 ATYSRDGQLIATGSADASIKILDTERMLAKSAMPIEVMMNETAQQNMENHPVIRTLYDHV 682
A+++ D LI TGS D + K+ D N + TL H
Sbjct: 267 ASFNWDCSLILTGSMDKTCKLWDAT-----------------------NGKCVATLTGHD 303
Query: 683 DEVTCLAFHPTEQILASGSRDYTLKLFDYSKPSAKRAFKYIQEAEMLRSISFHPSGDFIL 862
DE+ F T +++A+ S D T ++F S + K K + ISF+P G+ +L
Sbjct: 304 DEILDSCFDYTGKLIATASADGTARIF--SAATRKCIAKLEGHEGEISKISFNPQGNHLL 361
Query: 863 VGTQHPTLRLYDINTFQCFVSCNPQDQHTDAICSVNYNPSAHMYVTGSRTAASNMGWR 1036
G+ T R++D T QC + HTD I S +N ++ +TGS+ + WR
Sbjct: 362 TGSSDKTARIWDAQTGQCL---QVLEGHTDEIFSCAFNYKGNIVITGSKDNTCRI-WR 415
Score = 55.5 bits (132), Expect = 8e-08
Identities = 43/162 (26%), Positives = 72/162 (44%)
Frame = +2
Query: 521 GQLIATGSADASIKILDTERMLAKSAMPIEVMMNETAQQNMENHPVIRTLYDHVDEVTCL 700
G IATGS D + K+ ++E T H E+ CL
Sbjct: 147 GDKIATGSFDKTCKLW-----------------------SVETGKCYHTFRGHTAEIVCL 183
Query: 701 AFHPTEQILASGSRDYTLKLFDYSKPSAKRAFKYIQEAEMLRSISFHPSGDFILVGTQHP 880
+F+P ++A+GS D T KL+D + + + + + S+SF+ SGD I+ G+
Sbjct: 184 SFNPQSTLVATGSMDTTAKLWDIQ--NGEEVYTLRGHSAEIISLSFNTSGDRIITGSFDH 241
Query: 881 TLRLYDINTFQCFVSCNPQDQHTDAICSVNYNPSAHMYVTGS 1006
T+ ++D +T + N H I S ++N + +TGS
Sbjct: 242 TVVVWDADTGR---KVNILIGHCAEISSASFNWDCSLILTGS 280
>ref|NP_005877.2| katanin p80 WD40-containing subunit B1 [Homo sapiens].
Length = 655
Score = 64.7 bits (156), Expect = 1e-10
Identities = 42/178 (23%), Positives = 77/178 (43%)
Frame = +2
Query: 473 VTSHKGPCRVATYSRDGQLIATGSADASIKILDTERMLAKSAMPIEVMMNETAQQNMENH 652
+T H P + +LI GS SI++ D +E
Sbjct: 59 LTGHTSPVESVRLNTPEELIVAGSQSGSIRVWD-----------------------LEAA 95
Query: 653 PVIRTLYDHVDEVTCLAFHPTEQILASGSRDYTLKLFDYSKPSAKRAFKYIQEAEMLRSI 832
++RTL H + L FHP + +ASGS+D +KL+D + F+Y ++ +R +
Sbjct: 96 KILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGC--VFRYRGHSQAVRCL 153
Query: 833 SFHPSGDFILVGTQHPTLRLYDINTFQCFVSCNPQDQHTDAICSVNYNPSAHMYVTGS 1006
F P G ++ T++L+D+ + + HT + V ++P+ ++ +GS
Sbjct: 154 RFSPDGKWLASAADDHTVKLWDLTAGKMM---SEFPGHTGPVNVVEFHPNEYLLASGS 208
Score = 52.8 bits (125), Expect = 5e-07
Identities = 41/146 (28%), Positives = 63/146 (43%)
Frame = +2
Query: 482 HKGPCRVATYSRDGQLIATGSADASIKILDTERMLAKSAMPIEVMMNETAQQNMENHPVI 661
H R +S DG+ +A+ + D ++K+ D TA + M P
Sbjct: 146 HSQAVRCLRFSPDGKWLASAADDHTVKLWDL-----------------TAGKMMSEFP-- 186
Query: 662 RTLYDHVDEVTCLAFHPTEQILASGSRDYTLKLFDYSKPSAKRAFKYIQEAEMLRSISFH 841
H V + FHP E +LASGS D T++ +D K + E +RS+ F+
Sbjct: 187 ----GHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIE--GEPGPVRSVLFN 240
Query: 842 PSGDFILVGTQHPTLRLYDINTFQCF 919
P G + G Q +LR+Y +CF
Sbjct: 241 PDGCCLYSGCQ-DSLRVYGWEPERCF 265
>ref|NP_001155053.1| POC1 centriolar protein homolog A isoform 3 [Homo sapiens].
Length = 369
Score = 63.9 bits (154), Expect = 2e-10
Identities = 43/182 (23%), Positives = 76/182 (41%)
Frame = +2
Query: 461 ETCYVTSHKGPCRVATYSRDGQLIATGSADASIKILDTERMLAKSAMPIEVMMNETAQQN 640
E+ +H R + DGQ T S D ++K+ T R
Sbjct: 57 ESTVFRAHTATVRSVHFCSDGQSFVTASDDKTVKVWATHRQ------------------- 97
Query: 641 MENHPVIRTLYDHVDEVTCLAFHPTEQILASGSRDYTLKLFDYSKPSAKRAFKYIQEAEM 820
+ +L H++ V C F P +++ S S D T+KL+D K S + Y +
Sbjct: 98 ----KFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWD--KSSRECVHSYCEHGGF 151
Query: 821 LRSISFHPSGDFILVGTQHPTLRLYDINTFQCFVSCNPQDQHTDAICSVNYNPSAHMYVT 1000
+ + FHPSG I T++++D+ T + H+ A+ ++++PS + +T
Sbjct: 152 VTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLL---QHYQLHSAAVNGLSFHPSGNYLIT 208
Query: 1001 GS 1006
S
Sbjct: 209 AS 210
Score = 52.8 bits (125), Expect = 5e-07
Identities = 34/144 (23%), Positives = 66/144 (45%), Gaps = 1/144 (0%)
Frame = +2
Query: 473 VTSHKGPCRVATYSRDGQLIATGSADASIKILDTERMLAKSAMPIEVMMNETAQQNMENH 652
++ H R A +S DG+LI + S D ++K+ D +
Sbjct: 103 LSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKS-----------------------SR 139
Query: 653 PVIRTLYDHVDEVTCLAFHPTEQILASGSRDYTLKLFDYSKPSAKRAFKYIQ-EAEMLRS 829
+ + +H VT + FHP+ +A+ D T+K++D R ++ Q + +
Sbjct: 140 ECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVR---THRLLQHYQLHSAAVNG 196
Query: 830 ISFHPSGDFILVGTQHPTLRLYDI 901
+SFHPSG++++ + TL++ D+
Sbjct: 197 LSFHPSGNYLITASSDSTLKILDL 220
>ref|NP_001155052.1| POC1 centriolar protein homolog A isoform 2 [Homo sapiens].
Length = 359
Score = 63.9 bits (154), Expect = 2e-10
Identities = 43/182 (23%), Positives = 76/182 (41%)
Frame = +2
Query: 461 ETCYVTSHKGPCRVATYSRDGQLIATGSADASIKILDTERMLAKSAMPIEVMMNETAQQN 640
E+ +H R + DGQ T S D ++K+ T R
Sbjct: 95 ESTVFRAHTATVRSVHFCSDGQSFVTASDDKTVKVWATHRQ------------------- 135
Query: 641 MENHPVIRTLYDHVDEVTCLAFHPTEQILASGSRDYTLKLFDYSKPSAKRAFKYIQEAEM 820
+ +L H++ V C F P +++ S S D T+KL+D K S + Y +
Sbjct: 136 ----KFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWD--KSSRECVHSYCEHGGF 189
Query: 821 LRSISFHPSGDFILVGTQHPTLRLYDINTFQCFVSCNPQDQHTDAICSVNYNPSAHMYVT 1000
+ + FHPSG I T++++D+ T + H+ A+ ++++PS + +T
Sbjct: 190 VTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLL---QHYQLHSAAVNGLSFHPSGNYLIT 246
Query: 1001 GS 1006
S
Sbjct: 247 AS 248
Score = 52.8 bits (125), Expect = 5e-07
Identities = 34/144 (23%), Positives = 66/144 (45%), Gaps = 1/144 (0%)
Frame = +2
Query: 473 VTSHKGPCRVATYSRDGQLIATGSADASIKILDTERMLAKSAMPIEVMMNETAQQNMENH 652
++ H R A +S DG+LI + S D ++K+ D +
Sbjct: 141 LSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKS-----------------------SR 177
Query: 653 PVIRTLYDHVDEVTCLAFHPTEQILASGSRDYTLKLFDYSKPSAKRAFKYIQ-EAEMLRS 829
+ + +H VT + FHP+ +A+ D T+K++D R ++ Q + +
Sbjct: 178 ECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVR---THRLLQHYQLHSAAVNG 234
Query: 830 ISFHPSGDFILVGTQHPTLRLYDI 901
+SFHPSG++++ + TL++ D+
Sbjct: 235 LSFHPSGNYLITASSDSTLKILDL 258
>ref|NP_056241.3| POC1 centriolar protein homolog A isoform 1 [Homo sapiens].
Length = 407
Score = 63.9 bits (154), Expect = 2e-10
Identities = 43/182 (23%), Positives = 76/182 (41%)
Frame = +2
Query: 461 ETCYVTSHKGPCRVATYSRDGQLIATGSADASIKILDTERMLAKSAMPIEVMMNETAQQN 640
E+ +H R + DGQ T S D ++K+ T R
Sbjct: 95 ESTVFRAHTATVRSVHFCSDGQSFVTASDDKTVKVWATHRQ------------------- 135
Query: 641 MENHPVIRTLYDHVDEVTCLAFHPTEQILASGSRDYTLKLFDYSKPSAKRAFKYIQEAEM 820
+ +L H++ V C F P +++ S S D T+KL+D K S + Y +
Sbjct: 136 ----KFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWD--KSSRECVHSYCEHGGF 189
Query: 821 LRSISFHPSGDFILVGTQHPTLRLYDINTFQCFVSCNPQDQHTDAICSVNYNPSAHMYVT 1000
+ + FHPSG I T++++D+ T + H+ A+ ++++PS + +T
Sbjct: 190 VTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLL---QHYQLHSAAVNGLSFHPSGNYLIT 246
Query: 1001 GS 1006
S
Sbjct: 247 AS 248
Score = 52.8 bits (125), Expect = 5e-07
Identities = 34/144 (23%), Positives = 66/144 (45%), Gaps = 1/144 (0%)
Frame = +2
Query: 473 VTSHKGPCRVATYSRDGQLIATGSADASIKILDTERMLAKSAMPIEVMMNETAQQNMENH 652
++ H R A +S DG+LI + S D ++K+ D +
Sbjct: 141 LSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKS-----------------------SR 177
Query: 653 PVIRTLYDHVDEVTCLAFHPTEQILASGSRDYTLKLFDYSKPSAKRAFKYIQ-EAEMLRS 829
+ + +H VT + FHP+ +A+ D T+K++D R ++ Q + +
Sbjct: 178 ECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVR---THRLLQHYQLHSAAVNG 234
Query: 830 ISFHPSGDFILVGTQHPTLRLYDI 901
+SFHPSG++++ + TL++ D+
Sbjct: 235 LSFHPSGNYLITASSDSTLKILDL 258
>ref|NP_008882.2| transcription initiation factor TFIID subunit 5 [Homo sapiens].
Length = 800
Score = 62.0 bits (149), Expect = 9e-10
Identities = 47/220 (21%), Positives = 88/220 (40%), Gaps = 19/220 (8%)
Frame = +2
Query: 404 IDLEFDADVQTMSPEASEYETCYVTSHKGPCRVATYSRDGQLIATGSADASIKILDTERM 583
ID E D ++ + E + E + H GP A++S D + + S D ++++ +
Sbjct: 516 IDKESDDVLERIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTF 575
Query: 584 LA-------------KSAMPIEVMMNETAQQNM------ENHPVIRTLYDHVDEVTCLAF 706
P + +++ +R H+ +V C F
Sbjct: 576 TCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRF 635
Query: 707 HPTEQILASGSRDYTLKLFDYSKPSAKRAFKYIQEAEMLRSISFHPSGDFILVGTQHPTL 886
HP +A+GS D T++L+D + R F + S++F P+G F+ G +
Sbjct: 636 HPNSNYVATGSADRTVRLWDVLNGNCVRIF--TGHKGPIHSLTFSPNGRFLATGATDGRV 693
Query: 887 RLYDINTFQCFVSCNPQDQHTDAICSVNYNPSAHMYVTGS 1006
L+DI + HTD +CS+ ++ + +GS
Sbjct: 694 LLWDIGH---GLMVGELKGHTDTVCSLRFSRDGEILASGS 730
>ref|NP_001186706.1| POC1 centriolar protein homolog B isoform b [Homo sapiens].
Length = 436
Score = 60.5 bits (145), Expect = 3e-09
Identities = 41/176 (23%), Positives = 71/176 (40%)
Frame = +2
Query: 479 SHKGPCRVATYSRDGQLIATGSADASIKILDTERMLAKSAMPIEVMMNETAQQNMENHPV 658
+H P R +S DGQ +AT S D SIK+ +M
Sbjct: 58 AHTAPVRSVDFSADGQFLATASEDKSIKV-----------------------WSMYRQRF 94
Query: 659 IRTLYDHVDEVTCLAFHPTEQILASGSRDYTLKLFDYSKPSAKRAFKYIQEAEMLRSISF 838
+ +LY H V C F P +++ S S D T+K++D + F + F
Sbjct: 95 LYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFS--DSVGFANFVDF 152
Query: 839 HPSGDFILVGTQHPTLRLYDINTFQCFVSCNPQDQHTDAICSVNYNPSAHMYVTGS 1006
+PSG I T++++D+ + H+ + ++++PS + +T S
Sbjct: 153 NPSGTCIASAGSDQTVKVWDVRVNKLL---QHYQVHSGGVNCISFHPSGNYLITAS 205
Database: RefSeq49_HP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,297,164
Number of sequences in database: 32,964
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 32964
Number of Hits to DB: 39,395,372
Number of extensions: 992611
Number of successful extensions: 3517
Number of sequences better than 1.0e-05: 25
Number of HSP's gapped: 3357
Number of HSP's successfully gapped: 32
Length of query: 349
Length of database: 18,297,164
Length adjustment: 103
Effective length of query: 246
Effective length of database: 14,901,872
Effective search space: 3665860512
Effective search space used: 3665860512
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to Sscrofa10_2
BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-013611
(1047 letters)
Database: Sscrofa_10.2.fasta
4582 sequences; 2,808,509,378 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Sscrofa_Chr17 559 e-156
>Sscrofa_Chr17
|| Length = 69701581
Score = 559 bits (282), Expect = e-156
Identities = 282/282 (100%)
Strand = Plus / Plus
Query: 331 aggaatggaaaacgatgacactgcggttcagtatgcaattggtcggtcagatacagtcgc 390
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 64089123 aggaatggaaaacgatgacactgcggttcagtatgcaattggtcggtcagatacagtcgc 64089182
Query: 391 ccctggcacaggaattgacctggagtttgatgcagacgtccagactatgtccccagaggc 450
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 64089183 ccctggcacaggaattgacctggagtttgatgcagacgtccagactatgtccccagaggc 64089242
Query: 451 ctcagagtacgagacatgctatgtcacatcccacaaaggaccatgtcgtgtagctaccta 510
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 64089243 ctcagagtacgagacatgctatgtcacatcccacaaaggaccatgtcgtgtagctaccta 64089302
Query: 511 tagtagagatgggcagttaatagctactggatctgctgatgcttccataaaaatacttga 570
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 64089303 tagtagagatgggcagttaatagctactggatctgctgatgcttccataaaaatacttga 64089362
Query: 571 cacggaaagaatgttggccaaaagtgccatgccaatagaggt 612
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 64089363 cacggaaagaatgttggccaaaagtgccatgccaatagaggt 64089404
Score = 424 bits (214), Expect = e-116
Identities = 231/234 (98%), Gaps = 2/234 (0%)
Strand = Plus / Plus
Query: 806 caggaagctgaaatgttacgttccatctctttccatccctccggagactttatacttgtt 865
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 64090942 caggaagctgaaatgttacgttccatctctttccatccctccggagactttatacttgtt 64091001
Query: 866 gggactcagcatcctactcttcggctttatgacatcaacacctttcagtgttttgtctct 925
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 64091002 gggactcagcatcctactcttcggctttatgacatcaacacctttcagtgttttgtctct 64091061
Query: 926 tgcaatcctcaagatcaacacaccgatgctatatgttccgttaattacaatcctagcgcc 985
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 64091062 tgcaatcctcaagatcaacacaccgatgctatatgttccgttaattacaatcctagcgcc 64091121
Query: 986 catatgtacgtgactggtagc-aggacggctgcatcaaa-tatgggatggcgtt 1037
|||||||||||||||||||| ||||||||||||||||| ||||||||||||||
Sbjct: 64091122 aatatgtacgtgactggtagcaaggacggctgcatcaaattatgggatggcgtt 64091175
Score = 400 bits (202), Expect = e-109
Identities = 202/202 (100%)
Strand = Plus / Plus
Query: 132 cagctggcagggaaactgtcttcctctctaagatgtacagaaccaaagtgggtttgaagg 191
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 64087100 cagctggcagggaaactgtcttcctctctaagatgtacagaaccaaagtgggtttgaagg 64087159
Query: 192 accgtcagcagctctacaagctgatcatcagccagctgctctatgatggctacatcagca 251
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 64087160 accgtcagcagctctacaagctgatcatcagccagctgctctatgatggctacatcagca 64087219
Query: 252 ttgctaatggcctcatcaacgaaatcaagcctcagtctgtctgtgcaccctcagagcagc 311
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 64087220 ttgctaatggcctcatcaacgaaatcaagcctcagtctgtctgtgcaccctcagagcagc 64087279
Query: 312 tcctgcatctcatcaaactagg 333
||||||||||||||||||||||
Sbjct: 64087280 tcctgcatctcatcaaactagg 64087301
Score = 398 bits (201), Expect = e-108
Identities = 201/201 (100%)
Strand = Plus / Plus
Query: 609 aggtcatgatgaacgagaccgcacagcagaacatggaaaaccacccagtgatccgaactc 668
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 64089562 aggtcatgatgaacgagaccgcacagcagaacatggaaaaccacccagtgatccgaactc 64089621
Query: 669 tctatgaccacgtggatgaagtcacatgtctcgctttccacccaacagaacagatccttg 728
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 64089622 tctatgaccacgtggatgaagtcacatgtctcgctttccacccaacagaacagatccttg 64089681
Query: 729 cttctggttcaagggattacactcttaaattattcgattattccaaaccatctgcaaaaa 788
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 64089682 cttctggttcaagggattacactcttaaattattcgattattccaaaccatctgcaaaaa 64089741
Query: 789 gagccttcaaatacattcagg 809
|||||||||||||||||||||
Sbjct: 64089742 gagccttcaaatacattcagg 64089762
Score = 167 bits (84), Expect = 2e-38
Identities = 84/84 (100%)
Strand = Plus / Plus
Query: 51 gttggcctttaggtccgggtgatagcggaacgtacggtgaggggggcgtctgtgttctcg 110
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 64084302 gttggcctttaggtccgggtgatagcggaacgtacggtgaggggggcgtctgtgttctcg 64084361
Query: 111 ccgcggtgctccttccaactccag 134
||||||||||||||||||||||||
Sbjct: 64084362 ccgcggtgctccttccaactccag 64084385
Score = 101 bits (51), Expect = 8e-19
Identities = 51/51 (100%)
Strand = Plus / Plus
Query: 1 ggattcgcgtctccatttttctaggagagagcgggagaccggagagagcgg 51
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 64084063 ggattcgcgtctccatttttctaggagagagcgggagaccggagagagcgg 64084113
Database: Sscrofa_10.2.fasta
Posted date: Nov 16, 2011 10:34 AM
Number of letters in database: 2,808,509,378
Number of sequences in database: 4582
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4582
Number of Hits to DB: 27,770,446
Number of extensions: 123
Number of successful extensions: 123
Number of sequences better than 1.0e-05: 1
Number of HSP's gapped: 122
Number of HSP's successfully gapped: 6
Length of query: 1047
Length of database: 2,808,509,378
Length adjustment: 21
Effective length of query: 1026
Effective length of database: 2,808,413,156
Effective search space: 2881431898056
Effective search space used: 2881431898056
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 18 (36.2 bits)
S2: 30 (60.0 bits)