Search to RefSeqBP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-013618
(1079 letters)
Database: RefSeq49_BP.fasta
33,088 sequences; 17,681,374 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001071401.1| adenylate kinase isoenzyme 4, mitochondrial ... 442 e-124
Alignment gi|XP_002695630.1| PREDICTED: adenylate kinase isoenzyme 4, mit... 433 e-121
Alignment gi|XP_588793.1| PREDICTED: adenylate kinase isoenzyme 4, mitoch... 433 e-121
Alignment gi|NP_776662.1| GTP:AMP phosphotransferase, mitochondrial [Bos ... 273 2e-73
Alignment gi|NP_776314.1| adenylate kinase 2, mitochondrial [Bos taurus]. 153 2e-37
Alignment gi|NP_001193179.1| adenylate kinase 8 [Bos taurus]. 91 2e-18
Alignment gi|XP_002691698.1| PREDICTED: putative adenylate kinase-like pr... 91 2e-18
Alignment gi|NP_001013600.1| adenylate kinase isoenzyme 1 [Bos taurus]. 91 2e-18
Alignment gi|NP_001077226.1| adenylate kinase isoenzyme 5 [Bos taurus]. 84 3e-16
Alignment gi|NP_001039509.1| UMP-CMP kinase [Bos taurus]. 82 6e-16
>ref|NP_001071401.1| adenylate kinase isoenzyme 4, mitochondrial [Bos taurus].
Length = 223
Score = 442 bits (1137), Expect = e-124
Identities = 212/223 (95%), Positives = 220/223 (98%)
Frame = +1
Query: 214 MASKLLRAVILGPPGSGKGTVCQRIAQNFGLQHLSSGHFLRENIKANTEVGDMAKQYIEK 393
MASKLLRAVILGPPGSGKGTVCQRIAQNFGLQHLSSGHFLRENIKANTEVGDMAKQYIEK
Sbjct: 1 MASKLLRAVILGPPGSGKGTVCQRIAQNFGLQHLSSGHFLRENIKANTEVGDMAKQYIEK 60
Query: 394 GLLVPDHLITRLMLSELENRRGQHWLLDGFPRTLVQAEALDKICDLDLVITLNIPFETLK 573
GLLVPDH+ITRLML ELENRRG+HWLLDGFPRTLVQAEALD++CDLDLVITLNIPFETLK
Sbjct: 61 GLLVPDHVITRLMLLELENRRGEHWLLDGFPRTLVQAEALDRLCDLDLVITLNIPFETLK 120
Query: 574 DRLSRRWIHPSSGRVYNLDFNPPHVHGIDDITGEPLIQQEDDKPEAVAARLRQYKDVAKP 753
DRLSRRWIHP SGRVYNLDFNPPHVHG+DD+TGEPL+QQEDDKPEAVAARLRQYKDVAKP
Sbjct: 121 DRLSRRWIHPPSGRVYNLDFNPPHVHGMDDVTGEPLVQQEDDKPEAVAARLRQYKDVAKP 180
Query: 754 VIELYKGRGVLHQFSGTETNKIWPYVYTLFSNKITPIQSKEAY 882
VIELYK RGVLHQFSGTETNKIWPYVYTLFSNKITP+QSKEAY
Sbjct: 181 VIELYKSRGVLHQFSGTETNKIWPYVYTLFSNKITPVQSKEAY 223
>ref|XP_002695630.1| PREDICTED: adenylate kinase isoenzyme 4, mitochondrial-like [Bos
taurus].
Length = 223
Score = 433 bits (1114), Expect = e-121
Identities = 208/223 (93%), Positives = 217/223 (97%)
Frame = +1
Query: 214 MASKLLRAVILGPPGSGKGTVCQRIAQNFGLQHLSSGHFLRENIKANTEVGDMAKQYIEK 393
MASKLLRAV+LGPPGSGKGTVCQRIAQNF LQHLSSGHFLRENIKANTEVGDMAKQYIEK
Sbjct: 1 MASKLLRAVVLGPPGSGKGTVCQRIAQNFSLQHLSSGHFLRENIKANTEVGDMAKQYIEK 60
Query: 394 GLLVPDHLITRLMLSELENRRGQHWLLDGFPRTLVQAEALDKICDLDLVITLNIPFETLK 573
GLLVPDH ITRLML ELENRRG+HWLLDGFPRTLVQAEALD++CDLDLVITLNI FETLK
Sbjct: 61 GLLVPDHGITRLMLLELENRRGEHWLLDGFPRTLVQAEALDRLCDLDLVITLNIAFETLK 120
Query: 574 DRLSRRWIHPSSGRVYNLDFNPPHVHGIDDITGEPLIQQEDDKPEAVAARLRQYKDVAKP 753
DRLSRRWIHP SGRVYNLDFNPPHVHG+DD+TGEPL+QQEDDKPEAVAARLRQYKDVA+P
Sbjct: 121 DRLSRRWIHPPSGRVYNLDFNPPHVHGMDDVTGEPLVQQEDDKPEAVAARLRQYKDVARP 180
Query: 754 VIELYKGRGVLHQFSGTETNKIWPYVYTLFSNKITPIQSKEAY 882
VIELYK RGVLHQFSGTETNKIWPYVYTLFSNKITP+QSKEAY
Sbjct: 181 VIELYKSRGVLHQFSGTETNKIWPYVYTLFSNKITPVQSKEAY 223
>ref|XP_588793.1| PREDICTED: adenylate kinase isoenzyme 4, mitochondrial-like [Bos
taurus].
Length = 223
Score = 433 bits (1114), Expect = e-121
Identities = 208/223 (93%), Positives = 217/223 (97%)
Frame = +1
Query: 214 MASKLLRAVILGPPGSGKGTVCQRIAQNFGLQHLSSGHFLRENIKANTEVGDMAKQYIEK 393
MASKLLRAV+LGPPGSGKGTVCQRIAQNF LQHLSSGHFLRENIKANTEVGDMAKQYIEK
Sbjct: 1 MASKLLRAVVLGPPGSGKGTVCQRIAQNFSLQHLSSGHFLRENIKANTEVGDMAKQYIEK 60
Query: 394 GLLVPDHLITRLMLSELENRRGQHWLLDGFPRTLVQAEALDKICDLDLVITLNIPFETLK 573
GLLVPDH ITRLML ELENRRG+HWLLDGFPRTLVQAEALD++CDLDLVITLNI FETLK
Sbjct: 61 GLLVPDHGITRLMLLELENRRGEHWLLDGFPRTLVQAEALDRLCDLDLVITLNIAFETLK 120
Query: 574 DRLSRRWIHPSSGRVYNLDFNPPHVHGIDDITGEPLIQQEDDKPEAVAARLRQYKDVAKP 753
DRLSRRWIHP SGRVYNLDFNPPHVHG+DD+TGEPL+QQEDDKPEAVAARLRQYKDVA+P
Sbjct: 121 DRLSRRWIHPPSGRVYNLDFNPPHVHGMDDVTGEPLVQQEDDKPEAVAARLRQYKDVARP 180
Query: 754 VIELYKGRGVLHQFSGTETNKIWPYVYTLFSNKITPIQSKEAY 882
VIELYK RGVLHQFSGTETNKIWPYVYTLFSNKITP+QSKEAY
Sbjct: 181 VIELYKSRGVLHQFSGTETNKIWPYVYTLFSNKITPVQSKEAY 223
>ref|NP_776662.1| GTP:AMP phosphotransferase, mitochondrial [Bos taurus].
Length = 227
Score = 273 bits (698), Expect = 2e-73
Identities = 128/220 (58%), Positives = 169/220 (76%)
Frame = +1
Query: 217 ASKLLRAVILGPPGSGKGTVCQRIAQNFGLQHLSSGHFLRENIKANTEVGDMAKQYIEKG 396
+++LLRA I+G PGSGKGTV RI ++F L+HLSSG LR+N+ TE+G +AK +I++G
Sbjct: 4 SARLLRAAIMGAPGSGKGTVSSRITKHFELKHLSSGDLLRDNMLRGTEIGVLAKTFIDQG 63
Query: 397 LLVPDHLITRLMLSELENRRGQHWLLDGFPRTLVQAEALDKICDLDLVITLNIPFETLKD 576
L+PD ++TRL+L EL+N +WLLDGFPRTL QAEALD+ +D VI LN+PFE +K
Sbjct: 64 KLIPDDVMTRLVLHELKNLTQYNWLLDGFPRTLPQAEALDRAYQIDTVINLNVPFEVIKQ 123
Query: 577 RLSRRWIHPSSGRVYNLDFNPPHVHGIDDITGEPLIQQEDDKPEAVAARLRQYKDVAKPV 756
RL+ RWIHP SGRVYN++FNPP GIDD+TGEPL+Q+EDD+PE V RL+ Y+ +PV
Sbjct: 124 RLTARWIHPGSGRVYNIEFNPPKTMGIDDLTGEPLVQREDDRPETVVKRLKAYEAQTEPV 183
Query: 757 IELYKGRGVLHQFSGTETNKIWPYVYTLFSNKITPIQSKE 876
+E Y+ +GVL FSGTETNKIWP+VY K+ P +S+E
Sbjct: 184 LEYYRKKGVLETFSGTETNKIWPHVYAFLQTKL-PQRSQE 222
>ref|NP_776314.1| adenylate kinase 2, mitochondrial [Bos taurus].
Length = 234
Score = 153 bits (387), Expect = 2e-37
Identities = 85/202 (42%), Positives = 123/202 (60%), Gaps = 6/202 (2%)
Frame = +1
Query: 223 KLLRAVILGPPGSGKGTVCQRIAQNFGLQHLSSGHFLRENIKANTEVGDMAKQYIEKGLL 402
K +RAV+LGPPG+GKGT ++A+NF + HL++G LR + + +E+G K ++ G L
Sbjct: 16 KGVRAVLLGPPGAGKGTQAPKLAKNFCVCHLATGDMLRAMVASGSELGKKLKATMDAGKL 75
Query: 403 VPDHLITRLMLSELENRRGQH-WLLDGFPRTLVQAEALDKICD-----LDLVITLNIPFE 564
V D ++ L+ LE ++ +LLDGFPRT+ QAE LD + + LD VI +IP
Sbjct: 76 VSDEMVLELIEKNLETPPCKNGFLLDGFPRTVRQAEMLDDLMEKRKEKLDSVIEFSIPDS 135
Query: 565 TLKDRLSRRWIHPSSGRVYNLDFNPPHVHGIDDITGEPLIQQEDDKPEAVAARLRQYKDV 744
L R++ R IHP SGR Y+ +FNPP DDITGEPLI++ DD +A+ RL Y
Sbjct: 136 LLIRRITGRLIHPQSGRSYHEEFNPPKEPMKDDITGEPLIRRSDDNKKALKIRLEAYHTQ 195
Query: 745 AKPVIELYKGRGVLHQFSGTET 810
P++E Y RG+ ++T
Sbjct: 196 TTPLVEYYSKRGIHSAIDASQT 217
>ref|NP_001193179.1| adenylate kinase 8 [Bos taurus].
Length = 479
Score = 90.9 bits (224), Expect = 2e-18
Identities = 58/195 (29%), Positives = 98/195 (50%), Gaps = 5/195 (2%)
Frame = +1
Query: 232 RAVILGPPGSGKGTVCQRIAQNFGLQHLSSGHFLRENIKANTEVGDMAKQYIEKGLLVPD 411
R ++ GP GSGK +AQ +GL ++ G L+E + ++ D+ + + EK + VPD
Sbjct: 270 RVLLCGPVGSGKSLQAALLAQKYGLINVCCGQLLKEAVADKSKYSDLIQPFFEKEIAVPD 329
Query: 412 HLITRLMLSELENR----RGQHWLLDGFPRTLVQAEALDKI-CDLDLVITLNIPFETLKD 576
++I +++ L+ + RG W+L GFPR L QA +D + + V LN+PF+++ +
Sbjct: 330 NIIMKVLKQRLDQQDCVERG--WVLHGFPRDLDQAHLMDNLGYKPNRVFFLNVPFDSVIE 387
Query: 577 RLSRRWIHPSSGRVYNLDFNPPHVHGIDDITGEPLIQQEDDKPEAVAARLRQYKDVAKPV 756
RLS R P +G Y+L + PP + L+Q D E + ++ +
Sbjct: 388 RLSLRRTDPITGERYHLMYKPPPTIEVQ----ARLLQNPKDSEEQIKLKMDLF------- 436
Query: 757 IELYKGRGVLHQFSG 801
Y+ L QF G
Sbjct: 437 ---YRNSAELEQFYG 448
Score = 64.7 bits (156), Expect = 1e-10
Identities = 49/144 (34%), Positives = 74/144 (51%), Gaps = 7/144 (4%)
Frame = +1
Query: 232 RAVILGPPGSGKGTVCQRIAQNFGLQHLSSGHFLRENI--KANTEVGDMAKQYIEKGLLV 405
+ VILGPP SGK T+ +A +HLS+ E++ K + + A+ + +K +V
Sbjct: 59 KIVILGPPASGKTTIAMWLA-----KHLSTNLLSVESLIAKEYSPLAADARMHYQKFKMV 113
Query: 406 PDHLITRLMLSELEN----RRGQHWLLDGFPRTLVQAEALDKI-CDLDLVITLNIPFETL 570
PD L+ RLM L+ RRG W+LDG P T QA + + VI L+ P L
Sbjct: 114 PDMLLIRLMQERLKEEDCVRRG--WILDGIPETREQALTIQTLGISPRHVIVLSAPDTVL 171
Query: 571 KDRLSRRWIHPSSGRVYNLDFNPP 642
+R + I P +G +Y+ F+ P
Sbjct: 172 IERNLGKRIDPQTGEIYHTTFDWP 195
>ref|XP_002691698.1| PREDICTED: putative adenylate kinase-like protein C9orf98-like [Bos
taurus].
Length = 479
Score = 90.9 bits (224), Expect = 2e-18
Identities = 58/195 (29%), Positives = 98/195 (50%), Gaps = 5/195 (2%)
Frame = +1
Query: 232 RAVILGPPGSGKGTVCQRIAQNFGLQHLSSGHFLRENIKANTEVGDMAKQYIEKGLLVPD 411
R ++ GP GSGK +AQ +GL ++ G L+E + ++ D+ + + EK + VPD
Sbjct: 270 RVLLCGPVGSGKSLQAALLAQKYGLINVCCGQLLKEAVADKSKYSDLIQPFFEKEIAVPD 329
Query: 412 HLITRLMLSELENR----RGQHWLLDGFPRTLVQAEALDKI-CDLDLVITLNIPFETLKD 576
++I +++ L+ + RG W+L GFPR L QA +D + + V LN+PF+++ +
Sbjct: 330 NIIMKVLKQRLDQQDCVERG--WVLHGFPRDLDQAHLMDNLGYKPNRVFFLNVPFDSVIE 387
Query: 577 RLSRRWIHPSSGRVYNLDFNPPHVHGIDDITGEPLIQQEDDKPEAVAARLRQYKDVAKPV 756
RLS R P +G Y+L + PP + L+Q D E + ++ +
Sbjct: 388 RLSLRRTDPITGERYHLMYKPPPTIEVQ----ARLLQNPKDSEEQIKLKMDLF------- 436
Query: 757 IELYKGRGVLHQFSG 801
Y+ L QF G
Sbjct: 437 ---YRNSAELEQFYG 448
Score = 64.7 bits (156), Expect = 1e-10
Identities = 49/144 (34%), Positives = 74/144 (51%), Gaps = 7/144 (4%)
Frame = +1
Query: 232 RAVILGPPGSGKGTVCQRIAQNFGLQHLSSGHFLRENI--KANTEVGDMAKQYIEKGLLV 405
+ VILGPP SGK T+ +A +HLS+ E++ K + + A+ + +K +V
Sbjct: 59 KIVILGPPASGKTTIAMWLA-----KHLSTNLLSVESLIAKEYSPLAADARMHYQKFKMV 113
Query: 406 PDHLITRLMLSELEN----RRGQHWLLDGFPRTLVQAEALDKI-CDLDLVITLNIPFETL 570
PD L+ RLM L+ RRG W+LDG P T QA + + VI L+ P L
Sbjct: 114 PDMLLIRLMQERLKEEDCVRRG--WILDGIPETREQALTIQTLGISPRHVIVLSAPDTVL 171
Query: 571 KDRLSRRWIHPSSGRVYNLDFNPP 642
+R + I P +G +Y+ F+ P
Sbjct: 172 IERNLGKRIDPQTGEIYHTTFDWP 195
>ref|NP_001013600.1| adenylate kinase isoenzyme 1 [Bos taurus].
Length = 194
Score = 90.5 bits (223), Expect = 2e-18
Identities = 58/189 (30%), Positives = 96/189 (50%), Gaps = 5/189 (2%)
Frame = +1
Query: 241 ILGPPGSGKGTVCQRIAQNFGLQHLSSGHFLRENIKANTEVGDMAKQYIEKGLLVPDHLI 420
++G PGSGKGT C++I Q +G HLS+G LR + + + G M + +EKG LVP +
Sbjct: 13 VVGGPGSGKGTQCEKIVQKYGYTHLSTGDLLRAEVSSGSARGKMLSEIMEKGQLVPLETV 72
Query: 421 TRL----MLSELENRRGQHWLLDGFPRTLVQAEALD-KICDLDLVITLNIPFETLKDRLS 585
+ M+++++ +G +L+DG+PR + Q E + +I L++ ++ ET+ RL
Sbjct: 73 LDMLRDAMVAKVDTSKG--FLIDGYPREVQQGEEFERRIAQPTLLLYVDAGPETMTKRLL 130
Query: 586 RRWIHPSSGRVYNLDFNPPHVHGIDDITGEPLIQQEDDKPEAVAARLRQYKDVAKPVIEL 765
+R +SGRV DD E + RL Y +PVI
Sbjct: 131 KR--GETSGRV-------------------------DDNEETIKKRLETYYKATEPVIAF 163
Query: 766 YKGRGVLHQ 792
Y+ RG++ +
Sbjct: 164 YEKRGIVRK 172
>ref|NP_001077226.1| adenylate kinase isoenzyme 5 [Bos taurus].
Length = 562
Score = 83.6 bits (205), Expect = 3e-16
Identities = 57/195 (29%), Positives = 94/195 (48%), Gaps = 5/195 (2%)
Frame = +1
Query: 241 ILGPPGSGKGTVCQRIAQNFGLQHLSSGHFLRENIKANTEVGDMAKQYIEKGLLVPDHLI 420
++G PGSGKGT C ++A+ +G HLS+ L+ + + + + + +E+G LVP +I
Sbjct: 381 MIGGPGSGKGTQCGKLAEKYGFTHLSTDELLQNELSSESGRSKLIRDIMERGELVPSGII 440
Query: 421 TRL----MLSELENRRGQHWLLDGFPRTLVQAEALD-KICDLDLVITLNIPFETLKDRLS 585
L M++ L N +G +L+DG+PR + Q E +I D LVI ++ +T+ +RL
Sbjct: 441 LELLKEAMVASLSNTKG--FLIDGYPREVKQGEEFGRRIGDPHLVICMDCSADTMTNRLL 498
Query: 586 RRWIHPSSGRVYNLDFNPPHVHGIDDITGEPLIQQEDDKPEAVAARLRQYKDVAKPVIEL 765
+R N P Q DD +A RL Y + PV+
Sbjct: 499 QR------------SRNSP---------------QADDNTTTIAKRLETYYRASIPVVAY 531
Query: 766 YKGRGVLHQFSGTET 810
Y+ + LH+ + T
Sbjct: 532 YETKTQLHKINAEGT 546
Score = 72.0 bits (175), Expect = 8e-13
Identities = 59/219 (26%), Positives = 106/219 (48%), Gaps = 5/219 (2%)
Frame = +1
Query: 238 VILGPPGSGKGTVCQRIAQNFGLQHLSSGHFLRENI--KANTEVGDMAKQYIEKGLLVP- 408
+++G PGSGKGT +IA+ +G Q++S G LR+ I ++ + + I G L P
Sbjct: 136 LVIGGPGSGKGTQSLKIAERYGFQYISVGELLRKKIHSTSSNRKWSLIAKIITTGELAPQ 195
Query: 409 DHLITRLMLSELENRRGQHWLLDGFPRTLVQAEAL-DKICDLDLVITLNIPFETLKDRLS 585
+ IT + ++ ++DGFPR + QA + D+IC DLV+ L + LK+RL
Sbjct: 196 ETTITEIKQKLMQMPDEVGIVIDGFPRDVAQALSFEDQICTPDLVVFLACTNQRLKERLL 255
Query: 586 RRWIHPSSGRVYNLDFNPPHVHGIDDITGEPLIQQEDDKPEAVAARLRQYKDVAKPVIEL 765
+R + G P DD +A RL +K A P+++
Sbjct: 256 KR----------------------AEQQGRP-----DDNLKATQRRLMNFKQNAAPLVKY 288
Query: 766 YKGRGVLHQF-SGTETNKIWPYVYTLFSNKITPIQSKEA 879
++ +G++ F + + ++++ + +K+ P +KEA
Sbjct: 289 FQEKGLIMTFDADRDEDEVFYDISMAVDSKLFP--NKEA 325
>ref|NP_001039509.1| UMP-CMP kinase [Bos taurus].
Length = 228
Score = 82.4 bits (202), Expect = 6e-16
Identities = 55/213 (25%), Positives = 103/213 (48%), Gaps = 9/213 (4%)
Frame = +1
Query: 241 ILGPPGSGKGTVCQRIAQNFGLQHLSSGHFLRENIK-ANTEVGDMAKQYIEKGLLVPDHL 417
+LG PG+GKGT C RI + +G HLS+G LR+ K +++ G++ ++YI+ G +VP +
Sbjct: 40 VLGGPGAGKGTQCARIVEKYGYTHLSAGELLRDERKNPDSQYGELIEKYIKDGKIVPVEI 99
Query: 418 ITRLMLSELE-----NRRGQHWLLDGFPRTLVQAEALDKICDLDLVITLNIPFETLKDRL 582
L+ E++ N + +L+DGFPR + +K D ++ + F+ +
Sbjct: 100 TISLLRREMDQTMAANAQKNKFLIDGFPRNQDNLQGWNKTMDGKADVSFVLFFDCNNEIC 159
Query: 583 SRRWIH--PSSGRVYNLDFNPPHVHGIDDITGEPLIQQEDDKPEAVAARLRQYKDVAKPV 756
R + SSGR DD E++ R++ Y KP+
Sbjct: 160 IERCLERGKSSGR-------------------------SDDNRESLEKRIQTYLQSTKPI 194
Query: 757 IELYKGRGVLHQFSGTET-NKIWPYVYTLFSNK 852
I+LY+ G + + +++ ++++ V +F +
Sbjct: 195 IDLYEEMGKVRKIDASKSVDEVFDEVVKIFDKE 227
Database: RefSeq49_BP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 17,681,374
Number of sequences in database: 33,088
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33088
Number of Hits to DB: 42,621,276
Number of extensions: 1280690
Number of successful extensions: 5554
Number of sequences better than 1.0e-05: 13
Number of HSP's gapped: 5466
Number of HSP's successfully gapped: 18
Length of query: 359
Length of database: 17,681,374
Length adjustment: 103
Effective length of query: 256
Effective length of database: 14,273,310
Effective search space: 3653967360
Effective search space used: 3653967360
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)
Animal-Genome cDNA 20110601C-013618
Search to RefSeqCP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-013618
(1079 letters)
Database: RefSeq49_CP.fasta
33,336 sequences; 18,874,504 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_546674.2| PREDICTED: similar to Adenylate kinase isoenzym... 440 e-123
Alignment gi|XP_853049.1| PREDICTED: similar to adenylate kinase 3 [Canis... 274 1e-73
Alignment gi|XP_537864.2| PREDICTED: similar to adenylate kinase 3 [Canis... 271 6e-73
Alignment gi|XP_851083.1| PREDICTED: similar to adenylate kinase 3 [Canis... 264 1e-70
Alignment gi|XP_538558.1| PREDICTED: similar to adenylate kinase 3 [Canis... 249 2e-66
Alignment gi|XP_533543.2| PREDICTED: similar to adenylate kinase 3 [Canis... 219 3e-57
Alignment gi|XP_864020.1| PREDICTED: similar to adenylate kinase 2 isofor... 155 6e-38
Alignment gi|XP_535321.2| PREDICTED: similar to Adenylate kinase isoenzym... 155 6e-38
Alignment gi|NP_001124519.1| adenylate kinase isoenzyme 1 [Canis lupus fa... 90 4e-18
Alignment gi|XP_849710.1| PREDICTED: similar to C29E4.8 isoform 2 [Canis ... 90 4e-18
>ref|XP_546674.2| PREDICTED: similar to Adenylate kinase isoenzyme 4, mitochondrial
(ATP-AMP transphosphorylase) [Canis familiaris].
Length = 223
Score = 440 bits (1132), Expect = e-123
Identities = 214/223 (95%), Positives = 220/223 (98%)
Frame = +1
Query: 214 MASKLLRAVILGPPGSGKGTVCQRIAQNFGLQHLSSGHFLRENIKANTEVGDMAKQYIEK 393
MASKLLRAVILGPPGSGKGTVCQRIAQ+FGLQHLSSGHFLRENI+ANTEVGDMAKQYIEK
Sbjct: 1 MASKLLRAVILGPPGSGKGTVCQRIAQSFGLQHLSSGHFLRENIRANTEVGDMAKQYIEK 60
Query: 394 GLLVPDHLITRLMLSELENRRGQHWLLDGFPRTLVQAEALDKICDLDLVITLNIPFETLK 573
GLLVPDH+ITRLM+SELENRR QHWLLDGFPRTLVQAEALDKIC+LDLVITLNIPFETLK
Sbjct: 61 GLLVPDHVITRLMMSELENRRLQHWLLDGFPRTLVQAEALDKICELDLVITLNIPFETLK 120
Query: 574 DRLSRRWIHPSSGRVYNLDFNPPHVHGIDDITGEPLIQQEDDKPEAVAARLRQYKDVAKP 753
DRLSRRWIHP SGRVYNLDFNPPHVHGIDDITGEPL+QQEDDKPEAVAARLRQYKDVAKP
Sbjct: 121 DRLSRRWIHPPSGRVYNLDFNPPHVHGIDDITGEPLVQQEDDKPEAVAARLRQYKDVAKP 180
Query: 754 VIELYKGRGVLHQFSGTETNKIWPYVYTLFSNKITPIQSKEAY 882
VIELYK RGVLHQFSGTETNKIWPYVYTLFSNKITPIQSKEAY
Sbjct: 181 VIELYKSRGVLHQFSGTETNKIWPYVYTLFSNKITPIQSKEAY 223
>ref|XP_853049.1| PREDICTED: similar to adenylate kinase 3 [Canis familiaris].
Length = 2078
Score = 274 bits (700), Expect = 1e-73
Identities = 129/219 (58%), Positives = 165/219 (75%)
Frame = +1
Query: 217 ASKLLRAVILGPPGSGKGTVCQRIAQNFGLQHLSSGHFLRENIKANTEVGDMAKQYIEKG 396
+++LLRAVI+G PGSGKGTV RI ++F L+HLSSG LR+N+ TE+G +AK +I++G
Sbjct: 4 SARLLRAVIMGAPGSGKGTVSSRITKHFALKHLSSGDLLRDNMLRGTEIGVLAKTFIDQG 63
Query: 397 LLVPDHLITRLMLSELENRRGQHWLLDGFPRTLVQAEALDKICDLDLVITLNIPFETLKD 576
L+PD ++TRL L EL+N WLLDGFPRTL QAEALD +D VI LN+PFE +K
Sbjct: 64 KLIPDGVMTRLALHELKNLTQYSWLLDGFPRTLPQAEALDGAYQIDTVINLNVPFEVIKQ 123
Query: 577 RLSRRWIHPSSGRVYNLDFNPPHVHGIDDITGEPLIQQEDDKPEAVAARLRQYKDVAKPV 756
RL+ RWIHP+SGRVYN++FNPP GIDD+TGEPLIQ++DDKPE V RL+ Y+ +PV
Sbjct: 124 RLTARWIHPASGRVYNIEFNPPKAVGIDDLTGEPLIQRDDDKPETVVKRLKAYEVQTQPV 183
Query: 757 IELYKGRGVLHQFSGTETNKIWPYVYTLFSNKITPIQSK 873
+E Y+ +GVL FSGTETNKIWP+VY K+ I K
Sbjct: 184 LEYYRKKGVLETFSGTETNKIWPHVYAFLQTKVPQINQK 222
>ref|XP_537864.2| PREDICTED: similar to adenylate kinase 3 [Canis familiaris].
Length = 258
Score = 271 bits (694), Expect = 6e-73
Identities = 129/222 (58%), Positives = 164/222 (73%)
Frame = +1
Query: 208 KAMASKLLRAVILGPPGSGKGTVCQRIAQNFGLQHLSSGHFLRENIKANTEVGDMAKQYI 387
K +++LLRAVILG PGSGKGTV RI ++F L+HLSSG LR+++ TE+G +AK +I
Sbjct: 32 KGASARLLRAVILGAPGSGKGTVSSRITKHFALKHLSSGDLLRDDMLRGTEIGVLAKTFI 91
Query: 388 EKGLLVPDHLITRLMLSELENRRGQHWLLDGFPRTLVQAEALDKICDLDLVITLNIPFET 567
++G L+PD ++TRL L EL+N WLLDGFPRTL QAEALD D VI LN+PFE
Sbjct: 92 DQGKLIPDEVMTRLTLHELKNLTQYSWLLDGFPRTLPQAEALDGAYQTDTVINLNVPFEV 151
Query: 568 LKDRLSRRWIHPSSGRVYNLDFNPPHVHGIDDITGEPLIQQEDDKPEAVAARLRQYKDVA 747
+K RL+ RWIHP+SGRVYN++FNPP GIDD+TGEPLIQ++DD+PE V RL+ Y+
Sbjct: 152 IKQRLTARWIHPASGRVYNIEFNPPKAVGIDDLTGEPLIQRDDDQPETVVKRLKAYEVQT 211
Query: 748 KPVIELYKGRGVLHQFSGTETNKIWPYVYTLFSNKITPIQSK 873
PV+E Y+ +GVL FSGTETNKIWP+VY K+ I K
Sbjct: 212 HPVLEYYRKKGVLETFSGTETNKIWPHVYAFLQTKVPQINQK 253
>ref|XP_851083.1| PREDICTED: similar to adenylate kinase 3 [Canis familiaris].
Length = 288
Score = 264 bits (675), Expect = 1e-70
Identities = 133/264 (50%), Positives = 174/264 (65%), Gaps = 1/264 (0%)
Frame = +1
Query: 85 RGGGESPREPRV-SEAGAEATKFPGCVRGRGLGCSFGLPFLTKAMASKLLRAVILGPPGS 261
R G PR S+AGA A + P + +++LLRAVI+G PGS
Sbjct: 36 RRGAPHGAAPRARSQAGAPAPRLPAA----------------RGASARLLRAVIMGAPGS 79
Query: 262 GKGTVCQRIAQNFGLQHLSSGHFLRENIKANTEVGDMAKQYIEKGLLVPDHLITRLMLSE 441
GKGTV RI ++F L+HLSSG LR+++ TE+G +AK +I++G L D ++TRL L E
Sbjct: 80 GKGTVSSRITRHFALKHLSSGDLLRDDMLRGTEIGVLAKTFIDQGKLTQDEVMTRLALHE 139
Query: 442 LENRRGQHWLLDGFPRTLVQAEALDKICDLDLVITLNIPFETLKDRLSRRWIHPSSGRVY 621
L+N WLLDGFPRTL QAEAL +D I LN+PFE +K RL+ RWIHP+SGRV+
Sbjct: 140 LKNLTQYSWLLDGFPRTLPQAEALHGAYQIDTAINLNVPFEVIKQRLTARWIHPASGRVH 199
Query: 622 NLDFNPPHVHGIDDITGEPLIQQEDDKPEAVAARLRQYKDVAKPVIELYKGRGVLHQFSG 801
N++FNPP GIDD+TGEPLIQ++DD+PE V RL+ Y+ +PV+E Y+ +GVL FSG
Sbjct: 200 NIEFNPPKAVGIDDLTGEPLIQRDDDQPETVVKRLKAYEVQTQPVLEYYRKKGVLESFSG 259
Query: 802 TETNKIWPYVYTLFSNKITPIQSK 873
TETNKIWP+VY K+ I K
Sbjct: 260 TETNKIWPHVYAFLQTKVPQIDQK 283
>ref|XP_538558.1| PREDICTED: similar to adenylate kinase 3 [Canis familiaris].
Length = 227
Score = 249 bits (637), Expect = 2e-66
Identities = 117/217 (53%), Positives = 160/217 (73%)
Frame = +1
Query: 223 KLLRAVILGPPGSGKGTVCQRIAQNFGLQHLSSGHFLRENIKANTEVGDMAKQYIEKGLL 402
+LLRAV++GPPGSGK TV RI + F L+ SSG LR+N+ +TE+G +AK ++++G L
Sbjct: 6 RLLRAVLMGPPGSGKRTVALRITKGFQLKTFSSGDLLRDNLLRDTEIGVLAKVFMDQGKL 65
Query: 403 VPDHLITRLMLSELENRRGQHWLLDGFPRTLVQAEALDKICDLDLVITLNIPFETLKDRL 582
+PD ++TRL L +L+ + WLL GFPRTL QAEAL++ + LV++LN+P E +K RL
Sbjct: 66 IPDDIMTRLTLHQLKTFTQESWLLCGFPRTLPQAEALERAYQIHLVMSLNVPSEVIKQRL 125
Query: 583 SRRWIHPSSGRVYNLDFNPPHVHGIDDITGEPLIQQEDDKPEAVAARLRQYKDVAKPVIE 762
S RWIHPSSGRVYNL+FNPP G+DD+TGEPL+Q+EDD+PE + RL+ Y+D KPV+E
Sbjct: 126 SARWIHPSSGRVYNLEFNPPKAIGLDDLTGEPLVQREDDRPETLNQRLKAYEDQTKPVLE 185
Query: 763 LYKGRGVLHQFSGTETNKIWPYVYTLFSNKITPIQSK 873
Y+ +GVL FSGT+T++IWP V K+ I K
Sbjct: 186 YYREKGVLETFSGTKTDQIWPCVRAFLQTKVPQIDQK 222
>ref|XP_533543.2| PREDICTED: similar to adenylate kinase 3 [Canis familiaris].
Length = 203
Score = 219 bits (559), Expect = 3e-57
Identities = 102/175 (58%), Positives = 129/175 (73%)
Frame = +1
Query: 349 ANTEVGDMAKQYIEKGLLVPDHLITRLMLSELENRRGQHWLLDGFPRTLVQAEALDKICD 528
A E+G +AK +I++G L+PD ++TRL L EL+N WLLDGFPRTL QAEALD
Sbjct: 24 AQDEIGVLAKTFIDQGKLIPDDVMTRLALHELKNLTQYSWLLDGFPRTLPQAEALDGAYQ 83
Query: 529 LDLVITLNIPFETLKDRLSRRWIHPSSGRVYNLDFNPPHVHGIDDITGEPLIQQEDDKPE 708
+D VI LN+PFE +K RL+ RWIHP+SGRVYN++FNPP GIDD+TGEPLIQ++DDKPE
Sbjct: 84 IDTVINLNVPFEVIKQRLTARWIHPASGRVYNIEFNPPKAVGIDDLTGEPLIQRDDDKPE 143
Query: 709 AVAARLRQYKDVAKPVIELYKGRGVLHQFSGTETNKIWPYVYTLFSNKITPIQSK 873
V RL+ Y+ +PV+E Y+ +GVL FSGTETNKIWP+VY K+ I K
Sbjct: 144 TVVKRLKAYEVQTQPVLEYYRKKGVLETFSGTETNKIWPHVYAFLQTKVPQINQK 198
>ref|XP_864020.1| PREDICTED: similar to adenylate kinase 2 isoform b isoform 2 [Canis
familiaris].
Length = 234
Score = 155 bits (392), Expect = 6e-38
Identities = 84/202 (41%), Positives = 125/202 (61%), Gaps = 6/202 (2%)
Frame = +1
Query: 223 KLLRAVILGPPGSGKGTVCQRIAQNFGLQHLSSGHFLRENIKANTEVGDMAKQYIEKGLL 402
K +RAV+LGPPG+GKGT ++A+NF + HL++G LR + + +E+G K ++ G L
Sbjct: 16 KGIRAVLLGPPGAGKGTQAPKLAENFCVCHLATGDMLRAMVASGSELGKKLKATMDAGKL 75
Query: 403 VPDHLITRLMLSELENRRGQH-WLLDGFPRTLVQAEALDKICD-----LDLVITLNIPFE 564
V D ++ L+ LE + ++ +LLDGFPRT+ QAE LD + + LD VI +IP
Sbjct: 76 VSDEMVVELIEKNLETPQCKNGFLLDGFPRTVRQAEMLDDLMEKRKEKLDSVIEFSIPDS 135
Query: 565 TLKDRLSRRWIHPSSGRVYNLDFNPPHVHGIDDITGEPLIQQEDDKPEAVAARLRQYKDV 744
L R++ R IHP SGR Y+ +FNPP DDITGEPL+++ DD +A+ RL Y
Sbjct: 136 LLIRRITGRLIHPLSGRSYHEEFNPPKEPMKDDITGEPLVRRSDDNEKALKIRLEAYHTQ 195
Query: 745 AKPVIELYKGRGVLHQFSGTET 810
P+++ Y+ RG+ T+T
Sbjct: 196 TTPLVDYYRKRGIHSVIDATQT 217
>ref|XP_535321.2| PREDICTED: similar to Adenylate kinase isoenzyme 2, mitochondrial
(ATP-AMP transphosphorylase) isoform 1 [Canis
familiaris].
Length = 241
Score = 155 bits (392), Expect = 6e-38
Identities = 84/202 (41%), Positives = 125/202 (61%), Gaps = 6/202 (2%)
Frame = +1
Query: 223 KLLRAVILGPPGSGKGTVCQRIAQNFGLQHLSSGHFLRENIKANTEVGDMAKQYIEKGLL 402
K +RAV+LGPPG+GKGT ++A+NF + HL++G LR + + +E+G K ++ G L
Sbjct: 16 KGIRAVLLGPPGAGKGTQAPKLAENFCVCHLATGDMLRAMVASGSELGKKLKATMDAGKL 75
Query: 403 VPDHLITRLMLSELENRRGQH-WLLDGFPRTLVQAEALDKICD-----LDLVITLNIPFE 564
V D ++ L+ LE + ++ +LLDGFPRT+ QAE LD + + LD VI +IP
Sbjct: 76 VSDEMVVELIEKNLETPQCKNGFLLDGFPRTVRQAEMLDDLMEKRKEKLDSVIEFSIPDS 135
Query: 565 TLKDRLSRRWIHPSSGRVYNLDFNPPHVHGIDDITGEPLIQQEDDKPEAVAARLRQYKDV 744
L R++ R IHP SGR Y+ +FNPP DDITGEPL+++ DD +A+ RL Y
Sbjct: 136 LLIRRITGRLIHPLSGRSYHEEFNPPKEPMKDDITGEPLVRRSDDNEKALKIRLEAYHTQ 195
Query: 745 AKPVIELYKGRGVLHQFSGTET 810
P+++ Y+ RG+ T+T
Sbjct: 196 TTPLVDYYRKRGIHSVIDATQT 217
>ref|NP_001124519.1| adenylate kinase isoenzyme 1 [Canis lupus familiaris].
Length = 210
Score = 89.7 bits (221), Expect = 4e-18
Identities = 58/189 (30%), Positives = 96/189 (50%), Gaps = 5/189 (2%)
Frame = +1
Query: 241 ILGPPGSGKGTVCQRIAQNFGLQHLSSGHFLRENIKANTEVGDMAKQYIEKGLLVPDHLI 420
++G PGSGKGT C++I Q +G HLS+G LR + + + G M + +EKG LVP +
Sbjct: 29 VVGGPGSGKGTQCEKIVQKYGYTHLSTGDLLRAEVSSGSARGKMLSEIMEKGQLVPLETV 88
Query: 421 TRL----MLSELENRRGQHWLLDGFPRTLVQAEALD-KICDLDLVITLNIPFETLKDRLS 585
+ M+++++ +G +L+DG+PR + Q E + +I L++ ++ ET+ RL
Sbjct: 89 LDMLRDAMVAKVDTSKG--FLIDGYPREVQQGEEFERRIGQPTLLLYVDAGPETMTQRLL 146
Query: 586 RRWIHPSSGRVYNLDFNPPHVHGIDDITGEPLIQQEDDKPEAVAARLRQYKDVAKPVIEL 765
+R +SGRV DD E + RL Y +PVI
Sbjct: 147 KR--GETSGRV-------------------------DDNEETIKKRLETYYKATEPVIAF 179
Query: 766 YKGRGVLHQ 792
Y+ RG++ +
Sbjct: 180 YEKRGIVRK 188
>ref|XP_849710.1| PREDICTED: similar to C29E4.8 isoform 2 [Canis familiaris].
Length = 479
Score = 89.7 bits (221), Expect = 4e-18
Identities = 53/170 (31%), Positives = 91/170 (53%), Gaps = 5/170 (2%)
Frame = +1
Query: 232 RAVILGPPGSGKGTVCQRIAQNFGLQHLSSGHFLRENIKANTEVGDMAKQYIEKGLLVPD 411
R ++ GP GSGK +AQ +GL ++ G L+E + ++ G++ + Y +K + VPD
Sbjct: 270 RVLLFGPMGSGKSLQAALLAQKYGLVNVHCGQLLKEAVAGESKFGELIQPYFQKEMAVPD 329
Query: 412 HLITRLMLSELEN----RRGQHWLLDGFPRTLVQAEALDKI-CDLDLVITLNIPFETLKD 576
+I +++ L +RG W+L GFP+ L QA L+ + + V LN+PF+++ +
Sbjct: 330 SIIMKVLSQRLSQQDCIQRG--WVLHGFPKDLDQAHMLNSLGYQPNRVFFLNVPFDSVIE 387
Query: 577 RLSRRWIHPSSGRVYNLDFNPPHVHGIDDITGEPLIQQEDDKPEAVAARL 726
RL+ R + P +G Y+L + PP I L+Q D E + +L
Sbjct: 388 RLTLRRLDPVTGERYHLMYKPPPTLEIQ----ARLLQNPKDTEEQIKLKL 433
Score = 59.7 bits (143), Expect = 5e-09
Identities = 46/144 (31%), Positives = 72/144 (50%), Gaps = 7/144 (4%)
Frame = +1
Query: 232 RAVILGPPGSGKGTVCQRIAQNFGLQHLSSGHFLRENIKAN--TEVGDMAKQYIEKGLLV 405
+ VILGPP SGK T+ + +HLSS +N+ A + + +A+++ +K +
Sbjct: 59 KIVILGPPASGKTTIAMWLC-----KHLSSNLLTMDNLMAQKFSSLAAVAREHYQKMKKL 113
Query: 406 PDHLITRLMLSELEN----RRGQHWLLDGFPRTLVQAEALDKI-CDLDLVITLNIPFETL 570
+ L+ RL+ L RRG W+LDG P T QA + I VI L+ P L
Sbjct: 114 SNTLLVRLIQERLREEDCIRRG--WILDGIPATREQALMIQTIGITPRHVIALSAPDTVL 171
Query: 571 KDRLSRRWIHPSSGRVYNLDFNPP 642
+R + I P +G +Y+ F+ P
Sbjct: 172 IERNLGKRIDPQTGEIYHTTFDWP 195
Database: RefSeq49_CP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,874,504
Number of sequences in database: 33,336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33336
Number of Hits to DB: 44,582,888
Number of extensions: 1330387
Number of successful extensions: 6005
Number of sequences better than 1.0e-05: 16
Number of HSP's gapped: 5900
Number of HSP's successfully gapped: 18
Length of query: 359
Length of database: 18,874,504
Length adjustment: 104
Effective length of query: 255
Effective length of database: 15,407,560
Effective search space: 3928927800
Effective search space used: 3928927800
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to RefSeqSP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-013618
(1079 letters)
Database: RefSeq49_SP.fasta
24,897 sequences; 11,343,932 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001038062.1| adenylate kinase isoenzyme 4, mitochondrial ... 358 2e-99
Alignment gi|XP_003361231.1| PREDICTED: adenylate kinase isoenzyme 4, mit... 358 2e-99
Alignment gi|XP_001924714.2| PREDICTED: GTP:AMP phosphotransferase, mitoc... 279 2e-75
Alignment gi|XP_003353573.1| PREDICTED: GTP:AMP phosphotransferase, mitoc... 218 5e-57
Alignment gi|XP_003361623.1| PREDICTED: adenylate kinase 2, mitochondrial... 133 1e-31
Alignment gi|XP_003361624.1| PREDICTED: adenylate kinase 2, mitochondrial... 124 7e-29
Alignment gi|XP_003122225.2| PREDICTED: adenylate kinase isoenzyme 1 isof... 92 5e-19
Alignment gi|XP_003353744.1| PREDICTED: adenylate kinase 8 [Sus scrofa]. 88 9e-18
Alignment gi|XP_003127969.2| PREDICTED: adenylate kinase isoenzyme 5 [Sus... 83 2e-16
Alignment gi|XP_003356474.1| PREDICTED: adenylate kinase isoenzyme 5-like... 71 9e-13
>ref|NP_001038062.1| adenylate kinase isoenzyme 4, mitochondrial [Sus scrofa].
Length = 178
Score = 358 bits (920), Expect = 2e-99
Identities = 176/178 (98%), Positives = 176/178 (98%)
Frame = +1
Query: 214 MASKLLRAVILGPPGSGKGTVCQRIAQNFGLQHLSSGHFLRENIKANTEVGDMAKQYIEK 393
MASKLLRAVILGPPGSGKGTVCQRIAQN GLQHLSSGHFLRENIKANTEVGDMAKQYIEK
Sbjct: 1 MASKLLRAVILGPPGSGKGTVCQRIAQNLGLQHLSSGHFLRENIKANTEVGDMAKQYIEK 60
Query: 394 GLLVPDHLITRLMLSELENRRGQHWLLDGFPRTLVQAEALDKICDLDLVITLNIPFETLK 573
GLLVPDHLITRLMLSELENRRGQHWLLDGFPRTLVQAEALDKICDLDLVITLNIPFETLK
Sbjct: 61 GLLVPDHLITRLMLSELENRRGQHWLLDGFPRTLVQAEALDKICDLDLVITLNIPFETLK 120
Query: 574 DRLSRRWIHPSSGRVYNLDFNPPHVHGIDDITGEPLIQQEDDKPEAVAARLRQYKDVA 747
DRLSRRWIHPSSGRVYNLDFNPPHVHGIDDITGEPLIQQEDDKPEAVAARLRQYKD A
Sbjct: 121 DRLSRRWIHPSSGRVYNLDFNPPHVHGIDDITGEPLIQQEDDKPEAVAARLRQYKDAA 178
>ref|XP_003361231.1| PREDICTED: adenylate kinase isoenzyme 4, mitochondrial-like,
partial [Sus scrofa].
Length = 174
Score = 358 bits (920), Expect = 2e-99
Identities = 174/174 (100%), Positives = 174/174 (100%)
Frame = +1
Query: 361 VGDMAKQYIEKGLLVPDHLITRLMLSELENRRGQHWLLDGFPRTLVQAEALDKICDLDLV 540
VGDMAKQYIEKGLLVPDHLITRLMLSELENRRGQHWLLDGFPRTLVQAEALDKICDLDLV
Sbjct: 1 VGDMAKQYIEKGLLVPDHLITRLMLSELENRRGQHWLLDGFPRTLVQAEALDKICDLDLV 60
Query: 541 ITLNIPFETLKDRLSRRWIHPSSGRVYNLDFNPPHVHGIDDITGEPLIQQEDDKPEAVAA 720
ITLNIPFETLKDRLSRRWIHPSSGRVYNLDFNPPHVHGIDDITGEPLIQQEDDKPEAVAA
Sbjct: 61 ITLNIPFETLKDRLSRRWIHPSSGRVYNLDFNPPHVHGIDDITGEPLIQQEDDKPEAVAA 120
Query: 721 RLRQYKDVAKPVIELYKGRGVLHQFSGTETNKIWPYVYTLFSNKITPIQSKEAY 882
RLRQYKDVAKPVIELYKGRGVLHQFSGTETNKIWPYVYTLFSNKITPIQSKEAY
Sbjct: 121 RLRQYKDVAKPVIELYKGRGVLHQFSGTETNKIWPYVYTLFSNKITPIQSKEAY 174
>ref|XP_001924714.2| PREDICTED: GTP:AMP phosphotransferase, mitochondrial isoform 1 [Sus
scrofa].
Length = 227
Score = 279 bits (714), Expect = 2e-75
Identities = 130/219 (59%), Positives = 167/219 (76%)
Frame = +1
Query: 217 ASKLLRAVILGPPGSGKGTVCQRIAQNFGLQHLSSGHFLRENIKANTEVGDMAKQYIEKG 396
+++LLRA I+G PGSGKGTV RI ++F L+HLSSG LR+N+ TE+G +AK +I++G
Sbjct: 4 SARLLRAAIMGAPGSGKGTVSSRITKHFELKHLSSGDLLRDNMLRGTEIGVLAKTFIDQG 63
Query: 397 LLVPDHLITRLMLSELENRRGQHWLLDGFPRTLVQAEALDKICDLDLVITLNIPFETLKD 576
L+PD ++TRL+L EL+N WLLDGFPRTL+QAEALD++ LD VI LN+PFE +K
Sbjct: 64 KLIPDDVMTRLVLHELKNLTQYSWLLDGFPRTLLQAEALDRVYQLDTVINLNVPFEVIKQ 123
Query: 577 RLSRRWIHPSSGRVYNLDFNPPHVHGIDDITGEPLIQQEDDKPEAVAARLRQYKDVAKPV 756
RL+ RWIHP SGRVYN++FNPP GIDDITGEPL+Q+EDDKPE V RL+ Y+ +PV
Sbjct: 124 RLTARWIHPGSGRVYNIEFNPPKTVGIDDITGEPLVQREDDKPETVVKRLKAYEAQTEPV 183
Query: 757 IELYKGRGVLHQFSGTETNKIWPYVYTLFSNKITPIQSK 873
+E Y+ +GVL FSGTETNKIWP+VY K+ I K
Sbjct: 184 LEYYRKKGVLETFSGTETNKIWPHVYAFLQTKVPQINQK 222
>ref|XP_003353573.1| PREDICTED: GTP:AMP phosphotransferase, mitochondrial isoform 2 [Sus
scrofa].
Length = 187
Score = 218 bits (555), Expect = 5e-57
Identities = 110/219 (50%), Positives = 137/219 (62%)
Frame = +1
Query: 217 ASKLLRAVILGPPGSGKGTVCQRIAQNFGLQHLSSGHFLRENIKANTEVGDMAKQYIEKG 396
+++LLRA I+G PGSGKGTV RI ++F L+HLSSG LR+N+ T
Sbjct: 4 SARLLRAAIMGAPGSGKGTVSSRITKHFELKHLSSGDLLRDNMLRGT------------- 50
Query: 397 LLVPDHLITRLMLSELENRRGQHWLLDGFPRTLVQAEALDKICDLDLVITLNIPFETLKD 576
GFPRTL+QAEALD++ LD VI LN+PFE +K
Sbjct: 51 ---------------------------GFPRTLLQAEALDRVYQLDTVINLNVPFEVIKQ 83
Query: 577 RLSRRWIHPSSGRVYNLDFNPPHVHGIDDITGEPLIQQEDDKPEAVAARLRQYKDVAKPV 756
RL+ RWIHP SGRVYN++FNPP GIDDITGEPL+Q+EDDKPE V RL+ Y+ +PV
Sbjct: 84 RLTARWIHPGSGRVYNIEFNPPKTVGIDDITGEPLVQREDDKPETVVKRLKAYEAQTEPV 143
Query: 757 IELYKGRGVLHQFSGTETNKIWPYVYTLFSNKITPIQSK 873
+E Y+ +GVL FSGTETNKIWP+VY K+ I K
Sbjct: 144 LEYYRKKGVLETFSGTETNKIWPHVYAFLQTKVPQINQK 182
>ref|XP_003361623.1| PREDICTED: adenylate kinase 2, mitochondrial-like isoform 1 [Sus
scrofa].
Length = 228
Score = 133 bits (335), Expect = 1e-31
Identities = 79/202 (39%), Positives = 116/202 (57%), Gaps = 6/202 (2%)
Frame = +1
Query: 223 KLLRAVILGPPGSGKGTVCQRIAQNFGLQHLSSGHFLRENIKANTEVGDMAKQYIEKGLL 402
K +RAV+ PP + R+A+NF + HL++G LR + + +E+G K ++ G L
Sbjct: 16 KGIRAVLSSPPQA------PRLAENFCVCHLATGDMLRAMVASGSELGKKLKATMDAGKL 69
Query: 403 VPDHLITRLMLSELENRRGQH-WLLDGFPRTLVQAEALDKICD-----LDLVITLNIPFE 564
V D ++ L+ LE ++ +LLDGFPRT+ QAE LD + + LD VI +IP
Sbjct: 70 VSDEMVVELIEKNLETPPCKNGFLLDGFPRTVRQAEMLDDLMEKRKEKLDSVIEFSIPDA 129
Query: 565 TLKDRLSRRWIHPSSGRVYNLDFNPPHVHGIDDITGEPLIQQEDDKPEAVAARLRQYKDV 744
L R++ R IHP SGR Y+ +FNPP DDITGEPLI++ DD +A+ RL Y
Sbjct: 130 LLIRRITGRLIHPKSGRSYHEEFNPPKEPMKDDITGEPLIRRSDDNEKALKIRLEAYHTQ 189
Query: 745 AKPVIELYKGRGVLHQFSGTET 810
P++E Y RG+ ++T
Sbjct: 190 TTPLVEYYSKRGIHSAIDASQT 211
>ref|XP_003361624.1| PREDICTED: adenylate kinase 2, mitochondrial-like isoform 2 [Sus
scrofa].
Length = 227
Score = 124 bits (312), Expect = 7e-29
Identities = 77/202 (38%), Positives = 112/202 (55%), Gaps = 6/202 (2%)
Frame = +1
Query: 223 KLLRAVILGPPGSGKGTVCQRIAQNFGLQHLSSGHFLRENIKANTEVGDMAKQYIEKGLL 402
K +RAV+ PP + R+A+NF + HL++G LR + + +E+G K ++ G L
Sbjct: 16 KGIRAVLSSPPQA------PRLAENFCVCHLATGDMLRAMVASGSELGKKLKATMDAGKL 69
Query: 403 VPDHLITRLMLSELENRRGQH-WLLDGFPRTLVQAEALDKICD-----LDLVITLNIPFE 564
V D ++ L+ LE ++ +LLDGFPRT+ QAE LD + + LD VI +IP
Sbjct: 70 VSDEMVVELIEKNLETPPCKNGFLLDGFPRTVRQAEMLDDLMEKRKEKLDSVIEFSIPDA 129
Query: 565 TLKDRLSRRWIHPSSGRVYNLDFNPPHVHGIDDITGEPLIQQEDDKPEAVAARLRQYKDV 744
L IHP SGR Y+ +FNPP DDITGEPLI++ DD +A+ RL Y
Sbjct: 130 LL--------IHPKSGRSYHEEFNPPKEPMKDDITGEPLIRRSDDNEKALKIRLEAYHTQ 181
Query: 745 AKPVIELYKGRGVLHQFSGTET 810
P++E Y RG+ ++T
Sbjct: 182 TTPLVEYYSKRGIHSAIDASQT 203
>ref|XP_003122225.2| PREDICTED: adenylate kinase isoenzyme 1 isoform 1 [Sus scrofa].
Length = 199
Score = 92.0 bits (227), Expect = 5e-19
Identities = 63/207 (30%), Positives = 102/207 (49%), Gaps = 5/207 (2%)
Frame = +1
Query: 208 KAMASKLLRAVILGPPGSGKGTVCQRIAQNFGLQHLSSGHFLRENIKANTEVGDMAKQYI 387
K SK++ ++G PGSGKGT C++I Q +G HLS+G LR + + + G M + +
Sbjct: 4 KLKKSKII--FVVGGPGSGKGTQCEKIVQKYGYTHLSTGDLLRAEVSSGSARGKMLSEIM 61
Query: 388 EKGLLVPDHLITRL----MLSELENRRGQHWLLDGFPRTLVQAEALD-KICDLDLVITLN 552
EKG LVP + + M+++++ +G +L+DG+PR + Q E + KI L++ ++
Sbjct: 62 EKGQLVPLETVLDMLRDAMVAKVDTSKG--FLIDGYPREVKQGEEFERKIGQPTLLLYVD 119
Query: 553 IPFETLKDRLSRRWIHPSSGRVYNLDFNPPHVHGIDDITGEPLIQQEDDKPEAVAARLRQ 732
ET+ RL +R +SGRV DD E + RL
Sbjct: 120 AGPETMTKRLLKR--GETSGRV-------------------------DDNEETIKKRLET 152
Query: 733 YKDVAKPVIELYKGRGVLHQFSGTETN 813
Y +PVI Y+ RG++ + N
Sbjct: 153 YYKATEPVIAFYEKRGIVRKVRAQRVN 179
>ref|XP_003353744.1| PREDICTED: adenylate kinase 8 [Sus scrofa].
Length = 498
Score = 87.8 bits (216), Expect = 9e-18
Identities = 56/185 (30%), Positives = 96/185 (51%), Gaps = 5/185 (2%)
Frame = +1
Query: 232 RAVILGPPGSGKGTVCQRIAQNFGLQHLSSGHFLRENIKANTEVGDMAKQYIEKGLLVPD 411
R ++LGP GSGK +AQ +GL ++ G L+E + ++ G + + EK + VPD
Sbjct: 289 RVLLLGPMGSGKSLQAALLAQKYGLVNVCCGQLLKEAVADKSKYGKVILSFFEKEIAVPD 348
Query: 412 HLITRLMLSELENR----RGQHWLLDGFPRTLVQAEALDKI-CDLDLVITLNIPFETLKD 576
+I +++ L+ + RG W+L GFPR L QA L+ + + V LN+PF+++ +
Sbjct: 349 SIIMKVLGRRLDQQDCVERG--WVLHGFPRDLDQAHMLNSLGYKPNRVFFLNVPFDSILE 406
Query: 577 RLSRRWIHPSSGRVYNLDFNPPHVHGIDDITGEPLIQQEDDKPEAVAARLRQYKDVAKPV 756
RL+ R P +G Y+L + PP I L+Q D E V ++ + + +
Sbjct: 407 RLTLRRTDPVTGERYHLMYKPPPTVEIQ----ARLLQNPKDTEEQVKLKMDLFCRTSAEL 462
Query: 757 IELYK 771
+ Y+
Sbjct: 463 EQFYQ 467
Score = 57.0 bits (136), Expect = 2e-08
Identities = 45/142 (31%), Positives = 71/142 (50%), Gaps = 5/142 (3%)
Frame = +1
Query: 232 RAVILGPPGSGKGTVCQRIAQNFGLQHLSSGHFLRENIKAN--TEVGDMAKQYIEKGLLV 405
+ ++LGPP SGK TV + +HL S EN+ A + + A+Q+ +K +
Sbjct: 78 KILVLGPPASGKTTVAMWLC-----KHLRSNLLSVENLIARQFSSLAAGARQHYQKFKTL 132
Query: 406 PDHLITRLMLSEL--ENRRGQHWLLDGFPRTLVQAEALDKICDLDL-VITLNIPFETLKD 576
P L+ RL+ + L E+ + W+LDG P T QA L + VI L+ P L +
Sbjct: 133 PSGLLVRLVQARLREEDCVTRGWILDGIPETREQALLLQTLGIAPRHVIVLSAPDTVLIE 192
Query: 577 RLSRRWIHPSSGRVYNLDFNPP 642
R + + P +G VY+ F+ P
Sbjct: 193 RNLGKRVDPLTGEVYHTTFDWP 214
>ref|XP_003127969.2| PREDICTED: adenylate kinase isoenzyme 5 [Sus scrofa].
Length = 319
Score = 83.2 bits (204), Expect = 2e-16
Identities = 56/190 (29%), Positives = 93/190 (48%), Gaps = 6/190 (3%)
Frame = +1
Query: 241 ILGPPGSGKGTVCQRIAQNFGLQHLSSGHFLRENIKANTEVGDMAKQYIEKGLLVPDHLI 420
++G PGSGKGT C+++ + +GL HLS+ LR + + +E + + +E+G LVP +I
Sbjct: 116 MIGGPGSGKGTQCEKLGEKYGLTHLSTDKLLRNELSSESERSKLIRDVMERGELVPSGII 175
Query: 421 TRL----MLSELENRRGQHWLLDGFPRTLVQAEALD-KICDLDLVITLNIPFETLKDR-L 582
L M++ L N +G +L+DG+PR + Q E +I D LVI ++ +T+ +R L
Sbjct: 176 LELLKEAMVASLSNTKG--FLIDGYPREVKQGEEFGRRIGDPHLVICMDCSADTMTNRLL 233
Query: 583 SRRWIHPSSGRVYNLDFNPPHVHGIDDITGEPLIQQEDDKPEAVAARLRQYKDVAKPVIE 762
RR P + D+ +A RL Y + PV+
Sbjct: 234 QRRQSSPCA----------------------------DEDTTTIAKRLETYYRASIPVVA 265
Query: 763 LYKGRGVLHQ 792
Y+ + LH+
Sbjct: 266 YYETKTQLHK 275
>ref|XP_003356474.1| PREDICTED: adenylate kinase isoenzyme 5-like, partial [Sus scrofa].
Length = 297
Score = 71.2 bits (173), Expect = 9e-13
Identities = 53/187 (28%), Positives = 90/187 (48%), Gaps = 4/187 (2%)
Frame = +1
Query: 238 VILGPPGSGKGTVCQRIAQNFGLQHLSSGHFLRENI--KANTEVGDMAKQYIEKGLLVP- 408
+++G PGSGKGT +IA+ +G Q++S G LR+ I ++ + + I G L P
Sbjct: 136 LVIGGPGSGKGTQSLKIAERYGFQYISVGELLRKKIHSTSSNRKWSLIAKIITTGELAPQ 195
Query: 409 DHLITRLMLSELENRRGQHWLLDGFPRTLVQAEAL-DKICDLDLVITLNIPFETLKDRLS 585
+ IT + ++ ++DGFPR + QA + D+IC DLV+ L + LK+RL
Sbjct: 196 ETTITEIKQKLMQMPDEVGIVIDGFPRDVAQALSFEDQICTPDLVVFLACANQRLKERLQ 255
Query: 586 RRWIHPSSGRVYNLDFNPPHVHGIDDITGEPLIQQEDDKPEAVAARLRQYKDVAKPVIEL 765
+R + G P DD +A RL +K A P+++
Sbjct: 256 KR----------------------AEQQGRP-----DDNLKATQRRLMNFKQNAAPLVKY 288
Query: 766 YKGRGVL 786
++ +G++
Sbjct: 289 FQEKGLI 295
Database: RefSeq49_SP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 11,343,932
Number of sequences in database: 24,897
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 24897
Number of Hits to DB: 27,507,886
Number of extensions: 828837
Number of successful extensions: 3699
Number of sequences better than 1.0e-05: 12
Number of HSP's gapped: 3652
Number of HSP's successfully gapped: 15
Length of query: 359
Length of database: 11,343,932
Length adjustment: 100
Effective length of query: 259
Effective length of database: 8,854,232
Effective search space: 2293246088
Effective search space used: 2293246088
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)
Search to RefSeqMP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-013618
(1079 letters)
Database: RefSeq49_MP.fasta
30,036 sequences; 15,617,559 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_033777.1| adenylate kinase isoenzyme 4, mitochondrial [Mu... 417 e-117
Alignment gi|NP_001171076.1| adenylate kinase isoenzyme 4, mitochondrial ... 417 e-117
Alignment gi|NP_001171075.1| adenylate kinase isoenzyme 4, mitochondrial ... 417 e-117
Alignment gi|NP_001171073.1| adenylate kinase isoenzyme 4, mitochondrial ... 417 e-117
Alignment gi|NP_067274.1| GTP:AMP phosphotransferase, mitochondrial [Mus ... 272 4e-73
Alignment gi|NP_001029138.1| adenylate kinase 2, mitochondrial isoform a ... 152 3e-37
Alignment gi|NP_058591.2| adenylate kinase 2, mitochondrial isoform b [Mu... 152 3e-37
Alignment gi|NP_001185721.1| adenylate kinase isoenzyme 1 isoform 2 [Mus ... 96 6e-20
Alignment gi|NP_001185720.1| adenylate kinase isoenzyme 1 isoform 2 [Mus ... 96 6e-20
Alignment gi|NP_001185719.1| adenylate kinase isoenzyme 1 isoform 2 [Mus ... 96 6e-20
>ref|NP_033777.1| adenylate kinase isoenzyme 4, mitochondrial [Mus musculus].
Length = 223
Score = 417 bits (1073), Expect = e-117
Identities = 201/223 (90%), Positives = 212/223 (95%)
Frame = +1
Query: 214 MASKLLRAVILGPPGSGKGTVCQRIAQNFGLQHLSSGHFLRENIKANTEVGDMAKQYIEK 393
MASKLLRAVILGPPGSGKGTVC+RIAQNFGLQHLSSGH LREN+K TEVGD+AKQY+EK
Sbjct: 1 MASKLLRAVILGPPGSGKGTVCERIAQNFGLQHLSSGHLLRENLKTGTEVGDVAKQYLEK 60
Query: 394 GLLVPDHLITRLMLSELENRRGQHWLLDGFPRTLVQAEALDKICDLDLVITLNIPFETLK 573
GLLVPDH+ITRLM+SELE R QHWLLDGFPRTLVQAEALD ICD+DLVI+LNIPFETLK
Sbjct: 61 GLLVPDHVITRLMMSELETRSAQHWLLDGFPRTLVQAEALDGICDVDLVISLNIPFETLK 120
Query: 574 DRLSRRWIHPSSGRVYNLDFNPPHVHGIDDITGEPLIQQEDDKPEAVAARLRQYKDVAKP 753
DRLSRRWIHPSSGRVYNLDFNPP V GIDDITGEPL+QQEDDKPEAVAARLR+YKD AKP
Sbjct: 121 DRLSRRWIHPSSGRVYNLDFNPPQVQGIDDITGEPLVQQEDDKPEAVAARLRRYKDAAKP 180
Query: 754 VIELYKGRGVLHQFSGTETNKIWPYVYTLFSNKITPIQSKEAY 882
VIELYK RGVLHQFSGTETN+IWPYVYTLFSNKITPIQSKEAY
Sbjct: 181 VIELYKSRGVLHQFSGTETNRIWPYVYTLFSNKITPIQSKEAY 223
>ref|NP_001171076.1| adenylate kinase isoenzyme 4, mitochondrial [Mus musculus].
Length = 223
Score = 417 bits (1073), Expect = e-117
Identities = 201/223 (90%), Positives = 212/223 (95%)
Frame = +1
Query: 214 MASKLLRAVILGPPGSGKGTVCQRIAQNFGLQHLSSGHFLRENIKANTEVGDMAKQYIEK 393
MASKLLRAVILGPPGSGKGTVC+RIAQNFGLQHLSSGH LREN+K TEVGD+AKQY+EK
Sbjct: 1 MASKLLRAVILGPPGSGKGTVCERIAQNFGLQHLSSGHLLRENLKTGTEVGDVAKQYLEK 60
Query: 394 GLLVPDHLITRLMLSELENRRGQHWLLDGFPRTLVQAEALDKICDLDLVITLNIPFETLK 573
GLLVPDH+ITRLM+SELE R QHWLLDGFPRTLVQAEALD ICD+DLVI+LNIPFETLK
Sbjct: 61 GLLVPDHVITRLMMSELETRSAQHWLLDGFPRTLVQAEALDGICDVDLVISLNIPFETLK 120
Query: 574 DRLSRRWIHPSSGRVYNLDFNPPHVHGIDDITGEPLIQQEDDKPEAVAARLRQYKDVAKP 753
DRLSRRWIHPSSGRVYNLDFNPP V GIDDITGEPL+QQEDDKPEAVAARLR+YKD AKP
Sbjct: 121 DRLSRRWIHPSSGRVYNLDFNPPQVQGIDDITGEPLVQQEDDKPEAVAARLRRYKDAAKP 180
Query: 754 VIELYKGRGVLHQFSGTETNKIWPYVYTLFSNKITPIQSKEAY 882
VIELYK RGVLHQFSGTETN+IWPYVYTLFSNKITPIQSKEAY
Sbjct: 181 VIELYKSRGVLHQFSGTETNRIWPYVYTLFSNKITPIQSKEAY 223
>ref|NP_001171075.1| adenylate kinase isoenzyme 4, mitochondrial [Mus musculus].
Length = 223
Score = 417 bits (1073), Expect = e-117
Identities = 201/223 (90%), Positives = 212/223 (95%)
Frame = +1
Query: 214 MASKLLRAVILGPPGSGKGTVCQRIAQNFGLQHLSSGHFLRENIKANTEVGDMAKQYIEK 393
MASKLLRAVILGPPGSGKGTVC+RIAQNFGLQHLSSGH LREN+K TEVGD+AKQY+EK
Sbjct: 1 MASKLLRAVILGPPGSGKGTVCERIAQNFGLQHLSSGHLLRENLKTGTEVGDVAKQYLEK 60
Query: 394 GLLVPDHLITRLMLSELENRRGQHWLLDGFPRTLVQAEALDKICDLDLVITLNIPFETLK 573
GLLVPDH+ITRLM+SELE R QHWLLDGFPRTLVQAEALD ICD+DLVI+LNIPFETLK
Sbjct: 61 GLLVPDHVITRLMMSELETRSAQHWLLDGFPRTLVQAEALDGICDVDLVISLNIPFETLK 120
Query: 574 DRLSRRWIHPSSGRVYNLDFNPPHVHGIDDITGEPLIQQEDDKPEAVAARLRQYKDVAKP 753
DRLSRRWIHPSSGRVYNLDFNPP V GIDDITGEPL+QQEDDKPEAVAARLR+YKD AKP
Sbjct: 121 DRLSRRWIHPSSGRVYNLDFNPPQVQGIDDITGEPLVQQEDDKPEAVAARLRRYKDAAKP 180
Query: 754 VIELYKGRGVLHQFSGTETNKIWPYVYTLFSNKITPIQSKEAY 882
VIELYK RGVLHQFSGTETN+IWPYVYTLFSNKITPIQSKEAY
Sbjct: 181 VIELYKSRGVLHQFSGTETNRIWPYVYTLFSNKITPIQSKEAY 223
>ref|NP_001171073.1| adenylate kinase isoenzyme 4, mitochondrial [Mus musculus].
Length = 223
Score = 417 bits (1073), Expect = e-117
Identities = 201/223 (90%), Positives = 212/223 (95%)
Frame = +1
Query: 214 MASKLLRAVILGPPGSGKGTVCQRIAQNFGLQHLSSGHFLRENIKANTEVGDMAKQYIEK 393
MASKLLRAVILGPPGSGKGTVC+RIAQNFGLQHLSSGH LREN+K TEVGD+AKQY+EK
Sbjct: 1 MASKLLRAVILGPPGSGKGTVCERIAQNFGLQHLSSGHLLRENLKTGTEVGDVAKQYLEK 60
Query: 394 GLLVPDHLITRLMLSELENRRGQHWLLDGFPRTLVQAEALDKICDLDLVITLNIPFETLK 573
GLLVPDH+ITRLM+SELE R QHWLLDGFPRTLVQAEALD ICD+DLVI+LNIPFETLK
Sbjct: 61 GLLVPDHVITRLMMSELETRSAQHWLLDGFPRTLVQAEALDGICDVDLVISLNIPFETLK 120
Query: 574 DRLSRRWIHPSSGRVYNLDFNPPHVHGIDDITGEPLIQQEDDKPEAVAARLRQYKDVAKP 753
DRLSRRWIHPSSGRVYNLDFNPP V GIDDITGEPL+QQEDDKPEAVAARLR+YKD AKP
Sbjct: 121 DRLSRRWIHPSSGRVYNLDFNPPQVQGIDDITGEPLVQQEDDKPEAVAARLRRYKDAAKP 180
Query: 754 VIELYKGRGVLHQFSGTETNKIWPYVYTLFSNKITPIQSKEAY 882
VIELYK RGVLHQFSGTETN+IWPYVYTLFSNKITPIQSKEAY
Sbjct: 181 VIELYKSRGVLHQFSGTETNRIWPYVYTLFSNKITPIQSKEAY 223
>ref|NP_067274.1| GTP:AMP phosphotransferase, mitochondrial [Mus musculus].
Length = 227
Score = 272 bits (695), Expect = 4e-73
Identities = 128/219 (58%), Positives = 165/219 (75%)
Frame = +1
Query: 217 ASKLLRAVILGPPGSGKGTVCQRIAQNFGLQHLSSGHFLRENIKANTEVGDMAKQYIEKG 396
+ +LLRAVI+G PGSGKGTV RI ++F L+HLSSG LR+N+ TE+G +AK +I++G
Sbjct: 4 SGRLLRAVIMGAPGSGKGTVSSRITKHFELKHLSSGDLLRQNMLQGTEIGVLAKTFIDQG 63
Query: 397 LLVPDHLITRLMLSELENRRGQHWLLDGFPRTLVQAEALDKICDLDLVITLNIPFETLKD 576
L+PD ++TRL L EL+ WLLDGFPRTL QAEALDK+ +D VI LN+PFE +K
Sbjct: 64 KLIPDDVMTRLALHELKTLTQCSWLLDGFPRTLPQAEALDKVYQIDTVINLNVPFEVIKQ 123
Query: 577 RLSRRWIHPSSGRVYNLDFNPPHVHGIDDITGEPLIQQEDDKPEAVAARLRQYKDVAKPV 756
RL+ RWIHP+SGRVYN++FNPP GIDD+TGEPLIQ+EDDKPE V RL+ Y+ +PV
Sbjct: 124 RLTARWIHPASGRVYNIEFNPPKTVGIDDLTGEPLIQREDDKPETVIKRLKAYEAQTEPV 183
Query: 757 IELYKGRGVLHQFSGTETNKIWPYVYTLFSNKITPIQSK 873
++ Y+ +GVL FSGTETNKIWP+VY+ K+ K
Sbjct: 184 LQYYQKKGVLETFSGTETNKIWPHVYSFLQTKVPETTQK 222
>ref|NP_001029138.1| adenylate kinase 2, mitochondrial isoform a [Mus musculus].
Length = 239
Score = 152 bits (385), Expect = 3e-37
Identities = 85/205 (41%), Positives = 124/205 (60%), Gaps = 6/205 (2%)
Frame = +1
Query: 223 KLLRAVILGPPGSGKGTVCQRIAQNFGLQHLSSGHFLRENIKANTEVGDMAKQYIEKGLL 402
K +RAV+LGPPG+GKGT ++A+NF + HL++G LR + + +E+G K ++ G L
Sbjct: 14 KGIRAVLLGPPGAGKGTQAPKLAENFCVCHLATGDMLRAMVASGSELGKKLKATMDAGKL 73
Query: 403 VPDHLITRLMLSELENRRGQH-WLLDGFPRTLVQAEALDKICD-----LDLVITLNIPFE 564
V D ++ L+ LE ++ +LLDGFPRT+ QAE LD + + LD VI +I
Sbjct: 74 VSDEMVVELIEKNLETPSCKNGFLLDGFPRTVRQAEMLDDLMEKRKEKLDSVIEFSIQDS 133
Query: 565 TLKDRLSRRWIHPSSGRVYNLDFNPPHVHGIDDITGEPLIQQEDDKPEAVAARLRQYKDV 744
L R++ R IHP SGR Y+ +FNPP DDITGEPLI++ DD +A+ RL Y
Sbjct: 134 LLIRRITGRLIHPKSGRSYHEEFNPPKEPMKDDITGEPLIRRSDDNEKALKTRLEAYHTQ 193
Query: 745 AKPVIELYKGRGVLHQFSGTETNKI 819
P++E Y+ RG+ ++T I
Sbjct: 194 TTPLVEYYRKRGIHCAIDASQTPDI 218
>ref|NP_058591.2| adenylate kinase 2, mitochondrial isoform b [Mus musculus].
Length = 232
Score = 152 bits (385), Expect = 3e-37
Identities = 85/205 (41%), Positives = 124/205 (60%), Gaps = 6/205 (2%)
Frame = +1
Query: 223 KLLRAVILGPPGSGKGTVCQRIAQNFGLQHLSSGHFLRENIKANTEVGDMAKQYIEKGLL 402
K +RAV+LGPPG+GKGT ++A+NF + HL++G LR + + +E+G K ++ G L
Sbjct: 14 KGIRAVLLGPPGAGKGTQAPKLAENFCVCHLATGDMLRAMVASGSELGKKLKATMDAGKL 73
Query: 403 VPDHLITRLMLSELENRRGQH-WLLDGFPRTLVQAEALDKICD-----LDLVITLNIPFE 564
V D ++ L+ LE ++ +LLDGFPRT+ QAE LD + + LD VI +I
Sbjct: 74 VSDEMVVELIEKNLETPSCKNGFLLDGFPRTVRQAEMLDDLMEKRKEKLDSVIEFSIQDS 133
Query: 565 TLKDRLSRRWIHPSSGRVYNLDFNPPHVHGIDDITGEPLIQQEDDKPEAVAARLRQYKDV 744
L R++ R IHP SGR Y+ +FNPP DDITGEPLI++ DD +A+ RL Y
Sbjct: 134 LLIRRITGRLIHPKSGRSYHEEFNPPKEPMKDDITGEPLIRRSDDNEKALKTRLEAYHTQ 193
Query: 745 AKPVIELYKGRGVLHQFSGTETNKI 819
P++E Y+ RG+ ++T I
Sbjct: 194 TTPLVEYYRKRGIHCAIDASQTPDI 218
>ref|NP_001185721.1| adenylate kinase isoenzyme 1 isoform 2 [Mus musculus].
Length = 194
Score = 95.5 bits (236), Expect = 6e-20
Identities = 74/227 (32%), Positives = 112/227 (49%), Gaps = 8/227 (3%)
Frame = +1
Query: 214 MASKLLRAVIL---GPPGSGKGTVCQRIAQNFGLQHLSSGHFLRENIKANTEVGDMAKQY 384
M KL +A I+ G PGSGKGT C++I Q +G HLS+G LR + + +E G
Sbjct: 1 MEEKLKKAKIIFVVGGPGSGKGTQCEKIVQKYGYTHLSTGDLLRAEVSSGSERGKKLSAI 60
Query: 385 IEKGLLVP-DHLITRL---MLSELENRRGQHWLLDGFPRTLVQAEALD-KICDLDLVITL 549
+EKG LVP D ++ L ML+++++ G +L+DG+PR + Q E + KI L++ +
Sbjct: 61 MEKGELVPLDTVLDMLRDAMLAKVDSSNG--FLIDGYPREVKQGEEFEQKIGQPTLLLYV 118
Query: 550 NIPFETLKDRLSRRWIHPSSGRVYNLDFNPPHVHGIDDITGEPLIQQEDDKPEAVAARLR 729
+ ET+ RL +R +SGRV DD E + RL
Sbjct: 119 DAGAETMTQRLLKR--GETSGRV-------------------------DDNEETIKKRLE 151
Query: 730 QYKDVAKPVIELYKGRGVLHQFSGTETNKIWPYVYTLFSNKITPIQS 870
Y + +PVI Y RG++ + + T V T+FS T + S
Sbjct: 152 TYYNATEPVISFYDKRGIVRKVNAEGT------VDTVFSEVCTYLDS 192
>ref|NP_001185720.1| adenylate kinase isoenzyme 1 isoform 2 [Mus musculus].
Length = 194
Score = 95.5 bits (236), Expect = 6e-20
Identities = 74/227 (32%), Positives = 112/227 (49%), Gaps = 8/227 (3%)
Frame = +1
Query: 214 MASKLLRAVIL---GPPGSGKGTVCQRIAQNFGLQHLSSGHFLRENIKANTEVGDMAKQY 384
M KL +A I+ G PGSGKGT C++I Q +G HLS+G LR + + +E G
Sbjct: 1 MEEKLKKAKIIFVVGGPGSGKGTQCEKIVQKYGYTHLSTGDLLRAEVSSGSERGKKLSAI 60
Query: 385 IEKGLLVP-DHLITRL---MLSELENRRGQHWLLDGFPRTLVQAEALD-KICDLDLVITL 549
+EKG LVP D ++ L ML+++++ G +L+DG+PR + Q E + KI L++ +
Sbjct: 61 MEKGELVPLDTVLDMLRDAMLAKVDSSNG--FLIDGYPREVKQGEEFEQKIGQPTLLLYV 118
Query: 550 NIPFETLKDRLSRRWIHPSSGRVYNLDFNPPHVHGIDDITGEPLIQQEDDKPEAVAARLR 729
+ ET+ RL +R +SGRV DD E + RL
Sbjct: 119 DAGAETMTQRLLKR--GETSGRV-------------------------DDNEETIKKRLE 151
Query: 730 QYKDVAKPVIELYKGRGVLHQFSGTETNKIWPYVYTLFSNKITPIQS 870
Y + +PVI Y RG++ + + T V T+FS T + S
Sbjct: 152 TYYNATEPVISFYDKRGIVRKVNAEGT------VDTVFSEVCTYLDS 192
>ref|NP_001185719.1| adenylate kinase isoenzyme 1 isoform 2 [Mus musculus].
Length = 194
Score = 95.5 bits (236), Expect = 6e-20
Identities = 74/227 (32%), Positives = 112/227 (49%), Gaps = 8/227 (3%)
Frame = +1
Query: 214 MASKLLRAVIL---GPPGSGKGTVCQRIAQNFGLQHLSSGHFLRENIKANTEVGDMAKQY 384
M KL +A I+ G PGSGKGT C++I Q +G HLS+G LR + + +E G
Sbjct: 1 MEEKLKKAKIIFVVGGPGSGKGTQCEKIVQKYGYTHLSTGDLLRAEVSSGSERGKKLSAI 60
Query: 385 IEKGLLVP-DHLITRL---MLSELENRRGQHWLLDGFPRTLVQAEALD-KICDLDLVITL 549
+EKG LVP D ++ L ML+++++ G +L+DG+PR + Q E + KI L++ +
Sbjct: 61 MEKGELVPLDTVLDMLRDAMLAKVDSSNG--FLIDGYPREVKQGEEFEQKIGQPTLLLYV 118
Query: 550 NIPFETLKDRLSRRWIHPSSGRVYNLDFNPPHVHGIDDITGEPLIQQEDDKPEAVAARLR 729
+ ET+ RL +R +SGRV DD E + RL
Sbjct: 119 DAGAETMTQRLLKR--GETSGRV-------------------------DDNEETIKKRLE 151
Query: 730 QYKDVAKPVIELYKGRGVLHQFSGTETNKIWPYVYTLFSNKITPIQS 870
Y + +PVI Y RG++ + + T V T+FS T + S
Sbjct: 152 TYYNATEPVISFYDKRGIVRKVNAEGT------VDTVFSEVCTYLDS 192
Database: RefSeq49_MP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 15,617,559
Number of sequences in database: 30,036
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 30036
Number of Hits to DB: 36,946,354
Number of extensions: 1075254
Number of successful extensions: 4351
Number of sequences better than 1.0e-05: 16
Number of HSP's gapped: 4271
Number of HSP's successfully gapped: 20
Length of query: 359
Length of database: 15,617,559
Length adjustment: 103
Effective length of query: 256
Effective length of database: 12,523,851
Effective search space: 3206105856
Effective search space used: 3206105856
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)
Search to RefSeqHP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-013618
(1079 letters)
Database: RefSeq49_HP.fasta
32,964 sequences; 18,297,164 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_003119578.1| PREDICTED: adenylate kinase isoenzyme 4, mit... 436 e-122
Alignment gi|NP_001005353.1| adenylate kinase isoenzyme 4, mitochondrial ... 436 e-122
Alignment gi|NP_037542.1| adenylate kinase isoenzyme 4, mitochondrial iso... 436 e-122
Alignment gi|NP_982289.1| adenylate kinase isoenzyme 4, mitochondrial iso... 436 e-122
Alignment gi|NP_001186783.1| GTP:AMP phosphotransferase, mitochondrial is... 280 2e-75
Alignment gi|NP_057366.2| GTP:AMP phosphotransferase, mitochondrial isofo... 280 2e-75
Alignment gi|NP_001186781.1| GTP:AMP phosphotransferase, mitochondrial is... 219 3e-57
Alignment gi|NP_001186785.1| GTP:AMP phosphotransferase, mitochondrial is... 204 9e-53
Alignment gi|NP_001186784.1| GTP:AMP phosphotransferase, mitochondrial is... 204 9e-53
Alignment gi|NP_001186782.1| GTP:AMP phosphotransferase, mitochondrial is... 204 9e-53
>ref|XP_003119578.1| PREDICTED: adenylate kinase isoenzyme 4, mitochondrial-like [Homo
sapiens].
Length = 223
Score = 436 bits (1120), Expect = e-122
Identities = 210/223 (94%), Positives = 219/223 (98%)
Frame = +1
Query: 214 MASKLLRAVILGPPGSGKGTVCQRIAQNFGLQHLSSGHFLRENIKANTEVGDMAKQYIEK 393
MASKLLRAVILGPPGSGKGTVCQRIAQNFGLQHLSSGHFLRENIKA+TEVG+MAKQYIEK
Sbjct: 1 MASKLLRAVILGPPGSGKGTVCQRIAQNFGLQHLSSGHFLRENIKASTEVGEMAKQYIEK 60
Query: 394 GLLVPDHLITRLMLSELENRRGQHWLLDGFPRTLVQAEALDKICDLDLVITLNIPFETLK 573
LLVPDH+ITRLM+SELENRRGQHWLLDGFPRTL QAEALDKIC++DLVI+LNIPFETLK
Sbjct: 61 SLLVPDHVITRLMMSELENRRGQHWLLDGFPRTLGQAEALDKICEVDLVISLNIPFETLK 120
Query: 574 DRLSRRWIHPSSGRVYNLDFNPPHVHGIDDITGEPLIQQEDDKPEAVAARLRQYKDVAKP 753
DRLSRRWIHP SGRVYNLDFNPPHVHGIDD+TGEPL+QQEDDKPEAVAARLRQYKDVAKP
Sbjct: 121 DRLSRRWIHPPSGRVYNLDFNPPHVHGIDDVTGEPLVQQEDDKPEAVAARLRQYKDVAKP 180
Query: 754 VIELYKGRGVLHQFSGTETNKIWPYVYTLFSNKITPIQSKEAY 882
VIELYK RGVLHQFSGTETNKIWPYVYTLFSNKITPIQSKEAY
Sbjct: 181 VIELYKSRGVLHQFSGTETNKIWPYVYTLFSNKITPIQSKEAY 223
>ref|NP_001005353.1| adenylate kinase isoenzyme 4, mitochondrial isoform 5 [Homo
sapiens].
Length = 223
Score = 436 bits (1120), Expect = e-122
Identities = 210/223 (94%), Positives = 219/223 (98%)
Frame = +1
Query: 214 MASKLLRAVILGPPGSGKGTVCQRIAQNFGLQHLSSGHFLRENIKANTEVGDMAKQYIEK 393
MASKLLRAVILGPPGSGKGTVCQRIAQNFGLQHLSSGHFLRENIKA+TEVG+MAKQYIEK
Sbjct: 1 MASKLLRAVILGPPGSGKGTVCQRIAQNFGLQHLSSGHFLRENIKASTEVGEMAKQYIEK 60
Query: 394 GLLVPDHLITRLMLSELENRRGQHWLLDGFPRTLVQAEALDKICDLDLVITLNIPFETLK 573
LLVPDH+ITRLM+SELENRRGQHWLLDGFPRTL QAEALDKIC++DLVI+LNIPFETLK
Sbjct: 61 SLLVPDHVITRLMMSELENRRGQHWLLDGFPRTLGQAEALDKICEVDLVISLNIPFETLK 120
Query: 574 DRLSRRWIHPSSGRVYNLDFNPPHVHGIDDITGEPLIQQEDDKPEAVAARLRQYKDVAKP 753
DRLSRRWIHP SGRVYNLDFNPPHVHGIDD+TGEPL+QQEDDKPEAVAARLRQYKDVAKP
Sbjct: 121 DRLSRRWIHPPSGRVYNLDFNPPHVHGIDDVTGEPLVQQEDDKPEAVAARLRQYKDVAKP 180
Query: 754 VIELYKGRGVLHQFSGTETNKIWPYVYTLFSNKITPIQSKEAY 882
VIELYK RGVLHQFSGTETNKIWPYVYTLFSNKITPIQSKEAY
Sbjct: 181 VIELYKSRGVLHQFSGTETNKIWPYVYTLFSNKITPIQSKEAY 223
>ref|NP_037542.1| adenylate kinase isoenzyme 4, mitochondrial isoform 6 [Homo
sapiens].
Length = 223
Score = 436 bits (1120), Expect = e-122
Identities = 210/223 (94%), Positives = 219/223 (98%)
Frame = +1
Query: 214 MASKLLRAVILGPPGSGKGTVCQRIAQNFGLQHLSSGHFLRENIKANTEVGDMAKQYIEK 393
MASKLLRAVILGPPGSGKGTVCQRIAQNFGLQHLSSGHFLRENIKA+TEVG+MAKQYIEK
Sbjct: 1 MASKLLRAVILGPPGSGKGTVCQRIAQNFGLQHLSSGHFLRENIKASTEVGEMAKQYIEK 60
Query: 394 GLLVPDHLITRLMLSELENRRGQHWLLDGFPRTLVQAEALDKICDLDLVITLNIPFETLK 573
LLVPDH+ITRLM+SELENRRGQHWLLDGFPRTL QAEALDKIC++DLVI+LNIPFETLK
Sbjct: 61 SLLVPDHVITRLMMSELENRRGQHWLLDGFPRTLGQAEALDKICEVDLVISLNIPFETLK 120
Query: 574 DRLSRRWIHPSSGRVYNLDFNPPHVHGIDDITGEPLIQQEDDKPEAVAARLRQYKDVAKP 753
DRLSRRWIHP SGRVYNLDFNPPHVHGIDD+TGEPL+QQEDDKPEAVAARLRQYKDVAKP
Sbjct: 121 DRLSRRWIHPPSGRVYNLDFNPPHVHGIDDVTGEPLVQQEDDKPEAVAARLRQYKDVAKP 180
Query: 754 VIELYKGRGVLHQFSGTETNKIWPYVYTLFSNKITPIQSKEAY 882
VIELYK RGVLHQFSGTETNKIWPYVYTLFSNKITPIQSKEAY
Sbjct: 181 VIELYKSRGVLHQFSGTETNKIWPYVYTLFSNKITPIQSKEAY 223
>ref|NP_982289.1| adenylate kinase isoenzyme 4, mitochondrial isoform 7 [Homo
sapiens].
Length = 223
Score = 436 bits (1120), Expect = e-122
Identities = 210/223 (94%), Positives = 219/223 (98%)
Frame = +1
Query: 214 MASKLLRAVILGPPGSGKGTVCQRIAQNFGLQHLSSGHFLRENIKANTEVGDMAKQYIEK 393
MASKLLRAVILGPPGSGKGTVCQRIAQNFGLQHLSSGHFLRENIKA+TEVG+MAKQYIEK
Sbjct: 1 MASKLLRAVILGPPGSGKGTVCQRIAQNFGLQHLSSGHFLRENIKASTEVGEMAKQYIEK 60
Query: 394 GLLVPDHLITRLMLSELENRRGQHWLLDGFPRTLVQAEALDKICDLDLVITLNIPFETLK 573
LLVPDH+ITRLM+SELENRRGQHWLLDGFPRTL QAEALDKIC++DLVI+LNIPFETLK
Sbjct: 61 SLLVPDHVITRLMMSELENRRGQHWLLDGFPRTLGQAEALDKICEVDLVISLNIPFETLK 120
Query: 574 DRLSRRWIHPSSGRVYNLDFNPPHVHGIDDITGEPLIQQEDDKPEAVAARLRQYKDVAKP 753
DRLSRRWIHP SGRVYNLDFNPPHVHGIDD+TGEPL+QQEDDKPEAVAARLRQYKDVAKP
Sbjct: 121 DRLSRRWIHPPSGRVYNLDFNPPHVHGIDDVTGEPLVQQEDDKPEAVAARLRQYKDVAKP 180
Query: 754 VIELYKGRGVLHQFSGTETNKIWPYVYTLFSNKITPIQSKEAY 882
VIELYK RGVLHQFSGTETNKIWPYVYTLFSNKITPIQSKEAY
Sbjct: 181 VIELYKSRGVLHQFSGTETNKIWPYVYTLFSNKITPIQSKEAY 223
>ref|NP_001186783.1| GTP:AMP phosphotransferase, mitochondrial isoform a [Homo sapiens].
Length = 227
Score = 280 bits (716), Expect = 2e-75
Identities = 134/221 (60%), Positives = 170/221 (76%)
Frame = +1
Query: 217 ASKLLRAVILGPPGSGKGTVCQRIAQNFGLQHLSSGHFLRENIKANTEVGDMAKQYIEKG 396
+++LLRAVI+G PGSGKGTV RI +F L+HLSSG LR+N+ TE+G +AK +I++G
Sbjct: 4 SARLLRAVIMGAPGSGKGTVSSRITTHFELKHLSSGDLLRDNMLRGTEIGVLAKAFIDQG 63
Query: 397 LLVPDHLITRLMLSELENRRGQHWLLDGFPRTLVQAEALDKICDLDLVITLNIPFETLKD 576
L+PD ++TRL L EL+N WLLDGFPRTL QAEALD+ +D VI LN+PFE +K
Sbjct: 64 KLIPDDVMTRLALHELKNLTQYSWLLDGFPRTLPQAEALDRAYQIDTVINLNVPFEVIKQ 123
Query: 577 RLSRRWIHPSSGRVYNLDFNPPHVHGIDDITGEPLIQQEDDKPEAVAARLRQYKDVAKPV 756
RL+ RWIHP+SGRVYN++FNPP GIDD+TGEPLIQ+EDDKPE V RL+ Y+D KPV
Sbjct: 124 RLTARWIHPASGRVYNIEFNPPKTVGIDDLTGEPLIQREDDKPETVIKRLKAYEDQTKPV 183
Query: 757 IELYKGRGVLHQFSGTETNKIWPYVYTLFSNKITPIQSKEA 879
+E Y+ +GVL FSGTETNKIWPYVY K+ P +S++A
Sbjct: 184 LEYYQKKGVLETFSGTETNKIWPYVYAFLQTKV-PQRSQKA 223
>ref|NP_057366.2| GTP:AMP phosphotransferase, mitochondrial isoform a [Homo sapiens].
Length = 227
Score = 280 bits (716), Expect = 2e-75
Identities = 134/221 (60%), Positives = 170/221 (76%)
Frame = +1
Query: 217 ASKLLRAVILGPPGSGKGTVCQRIAQNFGLQHLSSGHFLRENIKANTEVGDMAKQYIEKG 396
+++LLRAVI+G PGSGKGTV RI +F L+HLSSG LR+N+ TE+G +AK +I++G
Sbjct: 4 SARLLRAVIMGAPGSGKGTVSSRITTHFELKHLSSGDLLRDNMLRGTEIGVLAKAFIDQG 63
Query: 397 LLVPDHLITRLMLSELENRRGQHWLLDGFPRTLVQAEALDKICDLDLVITLNIPFETLKD 576
L+PD ++TRL L EL+N WLLDGFPRTL QAEALD+ +D VI LN+PFE +K
Sbjct: 64 KLIPDDVMTRLALHELKNLTQYSWLLDGFPRTLPQAEALDRAYQIDTVINLNVPFEVIKQ 123
Query: 577 RLSRRWIHPSSGRVYNLDFNPPHVHGIDDITGEPLIQQEDDKPEAVAARLRQYKDVAKPV 756
RL+ RWIHP+SGRVYN++FNPP GIDD+TGEPLIQ+EDDKPE V RL+ Y+D KPV
Sbjct: 124 RLTARWIHPASGRVYNIEFNPPKTVGIDDLTGEPLIQREDDKPETVIKRLKAYEDQTKPV 183
Query: 757 IELYKGRGVLHQFSGTETNKIWPYVYTLFSNKITPIQSKEA 879
+E Y+ +GVL FSGTETNKIWPYVY K+ P +S++A
Sbjct: 184 LEYYQKKGVLETFSGTETNKIWPYVYAFLQTKV-PQRSQKA 223
>ref|NP_001186781.1| GTP:AMP phosphotransferase, mitochondrial isoform b [Homo sapiens].
Length = 187
Score = 219 bits (559), Expect = 3e-57
Identities = 114/221 (51%), Positives = 141/221 (63%)
Frame = +1
Query: 217 ASKLLRAVILGPPGSGKGTVCQRIAQNFGLQHLSSGHFLRENIKANTEVGDMAKQYIEKG 396
+++LLRAVI+G PGSGKGTV RI +F L+HLSSG LR+N+ T
Sbjct: 4 SARLLRAVIMGAPGSGKGTVSSRITTHFELKHLSSGDLLRDNMLRGT------------- 50
Query: 397 LLVPDHLITRLMLSELENRRGQHWLLDGFPRTLVQAEALDKICDLDLVITLNIPFETLKD 576
GFPRTL QAEALD+ +D VI LN+PFE +K
Sbjct: 51 ---------------------------GFPRTLPQAEALDRAYQIDTVINLNVPFEVIKQ 83
Query: 577 RLSRRWIHPSSGRVYNLDFNPPHVHGIDDITGEPLIQQEDDKPEAVAARLRQYKDVAKPV 756
RL+ RWIHP+SGRVYN++FNPP GIDD+TGEPLIQ+EDDKPE V RL+ Y+D KPV
Sbjct: 84 RLTARWIHPASGRVYNIEFNPPKTVGIDDLTGEPLIQREDDKPETVIKRLKAYEDQTKPV 143
Query: 757 IELYKGRGVLHQFSGTETNKIWPYVYTLFSNKITPIQSKEA 879
+E Y+ +GVL FSGTETNKIWPYVY K+ P +S++A
Sbjct: 144 LEYYQKKGVLETFSGTETNKIWPYVYAFLQTKV-PQRSQKA 183
>ref|NP_001186785.1| GTP:AMP phosphotransferase, mitochondrial isoform c [Homo sapiens].
Length = 157
Score = 204 bits (520), Expect = 9e-53
Identities = 97/154 (62%), Positives = 118/154 (76%)
Frame = +1
Query: 418 ITRLMLSELENRRGQHWLLDGFPRTLVQAEALDKICDLDLVITLNIPFETLKDRLSRRWI 597
+TRL L EL+N WLLDGFPRTL QAEALD+ +D VI LN+PFE +K RL+ RWI
Sbjct: 1 MTRLALHELKNLTQYSWLLDGFPRTLPQAEALDRAYQIDTVINLNVPFEVIKQRLTARWI 60
Query: 598 HPSSGRVYNLDFNPPHVHGIDDITGEPLIQQEDDKPEAVAARLRQYKDVAKPVIELYKGR 777
HP+SGRVYN++FNPP GIDD+TGEPLIQ+EDDKPE V RL+ Y+D KPV+E Y+ +
Sbjct: 61 HPASGRVYNIEFNPPKTVGIDDLTGEPLIQREDDKPETVIKRLKAYEDQTKPVLEYYQKK 120
Query: 778 GVLHQFSGTETNKIWPYVYTLFSNKITPIQSKEA 879
GVL FSGTETNKIWPYVY K+ P +S++A
Sbjct: 121 GVLETFSGTETNKIWPYVYAFLQTKV-PQRSQKA 153
>ref|NP_001186784.1| GTP:AMP phosphotransferase, mitochondrial isoform c [Homo sapiens].
Length = 157
Score = 204 bits (520), Expect = 9e-53
Identities = 97/154 (62%), Positives = 118/154 (76%)
Frame = +1
Query: 418 ITRLMLSELENRRGQHWLLDGFPRTLVQAEALDKICDLDLVITLNIPFETLKDRLSRRWI 597
+TRL L EL+N WLLDGFPRTL QAEALD+ +D VI LN+PFE +K RL+ RWI
Sbjct: 1 MTRLALHELKNLTQYSWLLDGFPRTLPQAEALDRAYQIDTVINLNVPFEVIKQRLTARWI 60
Query: 598 HPSSGRVYNLDFNPPHVHGIDDITGEPLIQQEDDKPEAVAARLRQYKDVAKPVIELYKGR 777
HP+SGRVYN++FNPP GIDD+TGEPLIQ+EDDKPE V RL+ Y+D KPV+E Y+ +
Sbjct: 61 HPASGRVYNIEFNPPKTVGIDDLTGEPLIQREDDKPETVIKRLKAYEDQTKPVLEYYQKK 120
Query: 778 GVLHQFSGTETNKIWPYVYTLFSNKITPIQSKEA 879
GVL FSGTETNKIWPYVY K+ P +S++A
Sbjct: 121 GVLETFSGTETNKIWPYVYAFLQTKV-PQRSQKA 153
>ref|NP_001186782.1| GTP:AMP phosphotransferase, mitochondrial isoform c [Homo sapiens].
Length = 157
Score = 204 bits (520), Expect = 9e-53
Identities = 97/154 (62%), Positives = 118/154 (76%)
Frame = +1
Query: 418 ITRLMLSELENRRGQHWLLDGFPRTLVQAEALDKICDLDLVITLNIPFETLKDRLSRRWI 597
+TRL L EL+N WLLDGFPRTL QAEALD+ +D VI LN+PFE +K RL+ RWI
Sbjct: 1 MTRLALHELKNLTQYSWLLDGFPRTLPQAEALDRAYQIDTVINLNVPFEVIKQRLTARWI 60
Query: 598 HPSSGRVYNLDFNPPHVHGIDDITGEPLIQQEDDKPEAVAARLRQYKDVAKPVIELYKGR 777
HP+SGRVYN++FNPP GIDD+TGEPLIQ+EDDKPE V RL+ Y+D KPV+E Y+ +
Sbjct: 61 HPASGRVYNIEFNPPKTVGIDDLTGEPLIQREDDKPETVIKRLKAYEDQTKPVLEYYQKK 120
Query: 778 GVLHQFSGTETNKIWPYVYTLFSNKITPIQSKEA 879
GVL FSGTETNKIWPYVY K+ P +S++A
Sbjct: 121 GVLETFSGTETNKIWPYVYAFLQTKV-PQRSQKA 153
Database: RefSeq49_HP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,297,164
Number of sequences in database: 32,964
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 32964
Number of Hits to DB: 43,619,364
Number of extensions: 1289797
Number of successful extensions: 5292
Number of sequences better than 1.0e-05: 20
Number of HSP's gapped: 5208
Number of HSP's successfully gapped: 27
Length of query: 359
Length of database: 18,297,164
Length adjustment: 104
Effective length of query: 255
Effective length of database: 14,868,908
Effective search space: 3791571540
Effective search space used: 3791571540
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to Sscrofa10_2
BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-013618
(1079 letters)
Database: Sscrofa_10.2.fasta
4582 sequences; 2,808,509,378 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Sscrofa_Chr06 587 e-165
gb|GL893824.2| Sus scrofa unplaced genomic scaffold ChrUScaf1709 565 e-158
>Sscrofa_Chr06
|| Length = 157765593
Score = 587 bits (296), Expect = e-165
Identities = 296/296 (100%)
Strand = Plus / Minus
Query: 63 caaaagtctctccttcccctgcaggggcggcggcgagtccccgcgggagcccagggtgtc 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 135663173 caaaagtctctccttcccctgcaggggcggcggcgagtccccgcgggagcccagggtgtc 135663114
Query: 123 agaagcaggggcagaagcaacaaagttcccgggttgtgtccgaggccgcggtctgggttg 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 135663113 agaagcaggggcagaagcaacaaagttcccgggttgtgtccgaggccgcggtctgggttg 135663054
Query: 183 ctcgttcggcctccccttcctcaccaaggcaatggcttccaaactcctgcgcgcggtcat 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 135663053 ctcgttcggcctccccttcctcaccaaggcaatggcttccaaactcctgcgcgcggtcat 135662994
Query: 243 ccttgggccgcccggctcgggcaagggcaccgtgtgccagaggatcgcccagaactttgg 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 135662993 ccttgggccgcccggctcgggcaagggcaccgtgtgccagaggatcgcccagaactttgg 135662934
Query: 303 cctccagcatctctccagcggccacttcctgcgggagaacatcaaggccaacacgg 358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 135662933 cctccagcatctctccagcggccacttcctgcgggagaacatcaaggccaacacgg 135662878
Score = 565 bits (285), Expect = e-158
Identities = 303/309 (98%)
Strand = Plus / Minus
Query: 771 gggccgaggagtgctccaccaattttcgggaacggagactaacaaaatctggccctatgt 830
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 135588889 gggccgaggagtgctccaccaattttcgggaacggagactaacaaaatctggccctatgt 135588830
Query: 831 ttacacacttttctcgaacaagatcacacctattcagtccaaagaagcatactgagccca 890
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 135588829 ttacacacttttctcgaacaagatcacacctattcagtccaaagaagcatactgagccca 135588770
Query: 891 cccagtagaagaagcaggaagatatggtccattcatccaatcgtatgtgtagtgttggtg 950
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 135588769 cccagtagaagaagcaggaagatatggtccattcatccaatcgtatgtgtagtgttggtg 135588710
Query: 951 ccgtgtccctattagaagctagccgagatagctcgcaacgtcttttctagtttaaatggt 1010
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 135588709 ccgtgtccctattagaagctagccgagatagctcgcagcgtcttttctagtttaaatggt 135588650
Query: 1011 gaactgactagaaaactaatgaataggaagaagtaacgaagaggctcttctgcttttcta 1070
||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 135588649 gaactgataagaaaactaatgaataggaagagttaacgaagaggctcttctgcttttcta 135588590
Query: 1071 ataaaaggg 1079
||| |||||
Sbjct: 135588589 atagaaggg 135588581
Score = 347 bits (175), Expect = 8e-93
Identities = 175/175 (100%)
Strand = Plus / Minus
Query: 478 ggttttcctagaacattagttcaggctgaagccttggacaaaatatgtgacctggatcta 537
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 135594755 ggttttcctagaacattagttcaggctgaagccttggacaaaatatgtgacctggatcta 135594696
Query: 538 gtgatcactttgaacattccatttgaaacgctcaaagatcgtctcagccggcgctggatt 597
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 135594695 gtgatcactttgaacattccatttgaaacgctcaaagatcgtctcagccggcgctggatt 135594636
Query: 598 cacccttctagtggaagggtgtataacctggacttcaacccacctcatgtacatg 652
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 135594635 cacccttctagtggaagggtgtataacctggacttcaacccacctcatgtacatg 135594581
Score = 244 bits (123), Expect = 8e-62
Identities = 123/123 (100%)
Strand = Plus / Minus
Query: 358 gaagttggtgatatggcaaagcagtacatagagaaaggtctcttggtcccagaccacttg 417
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 135617872 gaagttggtgatatggcaaagcagtacatagagaaaggtctcttggtcccagaccacttg 135617813
Query: 418 atcacacgcctcatgctgtcggagctggagaataggcgtggccagcactggctactggat 477
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 135617812 atcacacgcctcatgctgtcggagctggagaataggcgtggccagcactggctactggat 135617753
Query: 478 ggt 480
|||
Sbjct: 135617752 ggt 135617750
Score = 238 bits (120), Expect = 5e-60
Identities = 120/120 (100%)
Strand = Plus / Minus
Query: 652 gggattgatgacattactggtgagccattgatccagcaggaagacgacaaacctgaagca 711
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 135590692 gggattgatgacattactggtgagccattgatccagcaggaagacgacaaacctgaagca 135590633
Query: 712 gttgctgccagactaagacagtacaaggatgtggcaaagccagtgatcgaattatacaag 771
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 135590632 gttgctgccagactaagacagtacaaggatgtggcaaagccagtgatcgaattatacaag 135590573
Score = 127 bits (64), Expect = 1e-26
Identities = 64/64 (100%)
Strand = Plus / Minus
Query: 1 gtgtttatttggccactcggggtggagaggcgccggtctccggctcctcgcggcgggaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 135663706 gtgtttatttggccactcggggtggagaggcgccggtctccggctcctcgcggcgggaag 135663647
Query: 61 cgca 64
||||
Sbjct: 135663646 cgca 135663643
>gb|GL893824.2| Sus scrofa unplaced genomic scaffold ChrUScaf1709
Length = 51762
Score = 565 bits (285), Expect = e-158
Identities = 303/309 (98%)
Strand = Plus / Minus
Query: 771 gggccgaggagtgctccaccaattttcgggaacggagactaacaaaatctggccctatgt 830
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13567 gggccgaggagtgctccaccaattttcgggaacggagactaacaaaatctggccctatgt 13508
Query: 831 ttacacacttttctcgaacaagatcacacctattcagtccaaagaagcatactgagccca 890
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13507 ttacacacttttctcgaacaagatcacacctattcagtccaaagaagcatactgagccca 13448
Query: 891 cccagtagaagaagcaggaagatatggtccattcatccaatcgtatgtgtagtgttggtg 950
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13447 cccagtagaagaagcaggaagatatggtccattcatccaatcgtatgtgtagtgttggtg 13388
Query: 951 ccgtgtccctattagaagctagccgagatagctcgcaacgtcttttctagtttaaatggt 1010
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 13387 ccgtgtccctattagaagctagccgagatagctcgcagcgtcttttctagtttaaatggt 13328
Query: 1011 gaactgactagaaaactaatgaataggaagaagtaacgaagaggctcttctgcttttcta 1070
||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 13327 gaactgataagaaaactaatgaataggaagagttaacgaagaggctcttctgcttttcta 13268
Query: 1071 ataaaaggg 1079
||| |||||
Sbjct: 13267 atagaaggg 13259
Score = 347 bits (175), Expect = 8e-93
Identities = 175/175 (100%)
Strand = Plus / Minus
Query: 478 ggttttcctagaacattagttcaggctgaagccttggacaaaatatgtgacctggatcta 537
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19285 ggttttcctagaacattagttcaggctgaagccttggacaaaatatgtgacctggatcta 19226
Query: 538 gtgatcactttgaacattccatttgaaacgctcaaagatcgtctcagccggcgctggatt 597
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19225 gtgatcactttgaacattccatttgaaacgctcaaagatcgtctcagccggcgctggatt 19166
Query: 598 cacccttctagtggaagggtgtataacctggacttcaacccacctcatgtacatg 652
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19165 cacccttctagtggaagggtgtataacctggacttcaacccacctcatgtacatg 19111
Score = 244 bits (123), Expect = 8e-62
Identities = 123/123 (100%)
Strand = Plus / Minus
Query: 358 gaagttggtgatatggcaaagcagtacatagagaaaggtctcttggtcccagaccacttg 417
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 38901 gaagttggtgatatggcaaagcagtacatagagaaaggtctcttggtcccagaccacttg 38842
Query: 418 atcacacgcctcatgctgtcggagctggagaataggcgtggccagcactggctactggat 477
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 38841 atcacacgcctcatgctgtcggagctggagaataggcgtggccagcactggctactggat 38782
Query: 478 ggt 480
|||
Sbjct: 38781 ggt 38779
Score = 238 bits (120), Expect = 5e-60
Identities = 120/120 (100%)
Strand = Plus / Minus
Query: 652 gggattgatgacattactggtgagccattgatccagcaggaagacgacaaacctgaagca 711
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15370 gggattgatgacattactggtgagccattgatccagcaggaagacgacaaacctgaagca 15311
Query: 712 gttgctgccagactaagacagtacaaggatgtggcaaagccagtgatcgaattatacaag 771
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15310 gttgctgccagactaagacagtacaaggatgtggcaaagccagtgatcgaattatacaag 15251
Database: Sscrofa_10.2.fasta
Posted date: Nov 16, 2011 10:34 AM
Number of letters in database: 2,808,509,378
Number of sequences in database: 4582
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4582
Number of Hits to DB: 27,891,374
Number of extensions: 167
Number of successful extensions: 167
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 167
Number of HSP's successfully gapped: 10
Length of query: 1079
Length of database: 2,808,509,378
Length adjustment: 21
Effective length of query: 1058
Effective length of database: 2,808,413,156
Effective search space: 2971301119048
Effective search space used: 2971301119048
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 18 (36.2 bits)
S2: 30 (60.0 bits)