BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-013709
         (1487 letters)

Database: RefSeq49_CP.fasta 
           33,336 sequences; 18,874,504 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|XP_547903.2| PREDICTED: similar to ATP-binding cassette, sub...   680   0.0  
Alignment   gi|XP_868010.1| PREDICTED: similar to ATP-binding cassette, sub...   658   0.0  
Alignment   gi|XP_868005.1| PREDICTED: similar to ATP-binding cassette, sub...   445   e-127
Alignment   gi|XP_868000.1| PREDICTED: similar to ATP-binding cassette, sub...   445   e-127
Alignment   gi|XP_537064.2| PREDICTED: similar to ATP-binding cassette, sub...   124   2e-28
Alignment   gi|XP_534838.1| PREDICTED: similar to ATP-binding cassette, sub...    99   1e-20
Alignment   gi|XP_864684.1| PREDICTED: similar to ATP-binding cassette, sub...    95   2e-19
Alignment   gi|XP_855341.1| PREDICTED: similar to ATP-binding cassette, sub...    93   6e-19
Alignment   gi|XP_864706.1| PREDICTED: similar to ATP-binding cassette, sub...    91   4e-18

>ref|XP_547903.2| PREDICTED: similar to ATP-binding cassette, sub-family D, member 4
            isoform 1 isoform 1 [Canis familiaris].
          Length = 606

 Score =  680 bits (1755), Expect(2) = 0.0
 Identities = 339/409 (82%), Positives = 369/409 (90%)
 Frame = +2

Query: 191  KVLFPAWSSQNALMFLTLVCVALLEQLVIYRVGLIPSQYFGVLGSKDLSGFKTLTFLAVT 370
            KVLFP+WSSQNALMFLTL+ VALLEQLVIY+VGLIPSQY+GVLG+KDL GFKTLTFLAV 
Sbjct: 29   KVLFPSWSSQNALMFLTLLFVALLEQLVIYQVGLIPSQYYGVLGNKDLDGFKTLTFLAVM 88

Query: 371  LIILNSMLKSFNQFISSLLYVSWRKDLTEHLHHLYFRGRVYYTLNVLRDDVDNPDQRISQ 550
            LI+LNSMLKSF+QF  +LLYVSWRKDLTEHLHHLYF+GRVYYTLNVLRDDVDNPDQRISQ
Sbjct: 89   LIVLNSMLKSFDQFTCNLLYVSWRKDLTEHLHHLYFQGRVYYTLNVLRDDVDNPDQRISQ 148

Query: 551  DVERFCRQLSSMVSKLIISPFTLVYYTYQCFQSTGWLGPVSIFGYFIVGTMVNKMLMGPI 730
            DVERFCRQLSSM SKLIISPFTL+YYTYQCFQSTGWLGP+SIFGYFI+GT+VNK LMGPI
Sbjct: 149  DVERFCRQLSSMASKLIISPFTLIYYTYQCFQSTGWLGPMSIFGYFILGTLVNKTLMGPI 208

Query: 731  VVKLVQQEKLEGDFRFKHMQIRVNAEPAAFFRAGHVEHVXXXXXXXXXXXXXXELMSKEL 910
            V KLVQQEKLEGDFRFKHMQIRVNAE AAFFRAGHVEH               ELMSKEL
Sbjct: 209  VAKLVQQEKLEGDFRFKHMQIRVNAESAAFFRAGHVEHTRTDRRLQRLLQTQRELMSKEL 268

Query: 911  WLYIGVNTFDYLGSILSYVVIAIPIFSGVYGDLSPTELSTLVSKNAFVCMYLISCFTRLI 1090
            WLYIGVNTFDYLGSILSYVVIAIPIFSGVYGDLSPTELSTLVSKNAFVC+YLISCFTRLI
Sbjct: 269  WLYIGVNTFDYLGSILSYVVIAIPIFSGVYGDLSPTELSTLVSKNAFVCIYLISCFTRLI 328

Query: 1091 DLSTPLSDVASYTHRIGELRETLLDLALKSQEGEIQDESTWDLARAPGWPAVEPTGTAFL 1270
            DLS+ LSDVA YTHRIGEL+ETLLD++LK + GEI DES W++ RAPGWPA EP  TAFL
Sbjct: 329  DLSSTLSDVAGYTHRIGELQETLLDMSLKLRGGEILDESEWNMDRAPGWPAAEPADTAFL 388

Query: 1271 LEQVCISAPSSNKPLIQDLNLKICQGQNLLITGNTCTGKTSLLPILGSL 1417
            LE+V + APSS+KPLI+DL+LKI +GQ+LLITGNT TGK+SLL +LG L
Sbjct: 389  LERVSVCAPSSHKPLIKDLSLKISEGQSLLITGNTGTGKSSLLRVLGGL 437



 Score = 31.6 bits (70), Expect(2) = 0.0
 Identities = 13/15 (86%), Positives = 14/15 (93%)
 Frame = +1

Query: 1441 LQMPTDFGPHGVLFL 1485
            +QM TDFGPHGVLFL
Sbjct: 445  VQMLTDFGPHGVLFL 459


>ref|XP_868010.1| PREDICTED: similar to ATP-binding cassette, sub-family D, member 4
            isoform 1 isoform 4 [Canis familiaris].
          Length = 570

 Score =  658 bits (1697), Expect(2) = 0.0
 Identities = 334/409 (81%), Positives = 364/409 (88%)
 Frame = +2

Query: 191  KVLFPAWSSQNALMFLTLVCVALLEQLVIYRVGLIPSQYFGVLGSKDLSGFKTLTFLAVT 370
            KVLFP+WSSQNALMFLTL+ VALLEQLVIY+VGLIPSQY+GVLG+KDL GFKTLTFLAV 
Sbjct: 29   KVLFPSWSSQNALMFLTLLFVALLEQLVIYQVGLIPSQYYGVLGNKDLDGFKTLTFLAVM 88

Query: 371  LIILNSMLKSFNQFISSLLYVSWRKDLTEHLHHLYFRGRVYYTLNVLRDDVDNPDQRISQ 550
            LI+LNSMLKSF+QF  +LLYVSWRKDLTEHLHHLYF+GRVYYTLNVLRDDVDNPDQRISQ
Sbjct: 89   LIVLNSMLKSFDQFTCNLLYVSWRKDLTEHLHHLYFQGRVYYTLNVLRDDVDNPDQRISQ 148

Query: 551  DVERFCRQLSSMVSKLIISPFTLVYYTYQCFQSTGWLGPVSIFGYFIVGTMVNKMLMGPI 730
            DVERFCRQLSSM SKLIISPFTL+YYTYQCFQSTGWLGP+SIFGYFI+GT+VNK LMGPI
Sbjct: 149  DVERFCRQLSSMASKLIISPFTLIYYTYQCFQSTGWLGPMSIFGYFILGTLVNKTLMGPI 208

Query: 731  VVKLVQQEKLEGDFRFKHMQIRVNAEPAAFFRAGHVEHVXXXXXXXXXXXXXXELMSKEL 910
            V KLVQQEKLEGDFRFKHMQIRVNAE AAFFRAGHVEH               ELMSKEL
Sbjct: 209  VAKLVQQEKLEGDFRFKHMQIRVNAESAAFFRAGHVEHTRTDRRLQRLLQTQRELMSKEL 268

Query: 911  WLYIGVNTFDYLGSILSYVVIAIPIFSGVYGDLSPTELSTLVSKNAFVCMYLISCFTRLI 1090
            WLYIGVNTFDYLGSILSYVVIAIPIFSGVYGDLSPTELSTLVSKNAFVC+YLISCFTRLI
Sbjct: 269  WLYIGVNTFDYLGSILSYVVIAIPIFSGVYGDLSPTELSTLVSKNAFVCIYLISCFTRLI 328

Query: 1091 DLSTPLSDVASYTHRIGELRETLLDLALKSQEGEIQDESTWDLARAPGWPAVEPTGTAFL 1270
            DLS+ LSDVA YTHRIGEL+ETLLD++LK + GEI DES W++ R   WPA     TAFL
Sbjct: 329  DLSSTLSDVAGYTHRIGELQETLLDMSLKLRGGEILDESEWNMDR---WPA----DTAFL 381

Query: 1271 LEQVCISAPSSNKPLIQDLNLKICQGQNLLITGNTCTGKTSLLPILGSL 1417
            LE+V + APSS+KPLI+DL+LKI +GQ+LLITGNT TGK+SLL +LG L
Sbjct: 382  LERVSVCAPSSHKPLIKDLSLKISEGQSLLITGNTGTGKSSLLRVLGGL 430



 Score = 31.6 bits (70), Expect(2) = 0.0
 Identities = 13/15 (86%), Positives = 14/15 (93%)
 Frame = +1

Query: 1441 LQMPTDFGPHGVLFL 1485
            +QM TDFGPHGVLFL
Sbjct: 438  VQMLTDFGPHGVLFL 452


>ref|XP_868005.1| PREDICTED: similar to ATP-binding cassette, sub-family D, member 4
            isoform 2 isoform 3 [Canis familiaris].
          Length = 447

 Score =  445 bits (1145), Expect(2) = e-127
 Identities = 222/278 (79%), Positives = 243/278 (87%)
 Frame = +2

Query: 584  MVSKLIISPFTLVYYTYQCFQSTGWLGPVSIFGYFIVGTMVNKMLMGPIVVKLVQQEKLE 763
            M SKLIISPFTL+YYTYQCFQSTGWLGP+SIFGYFI+GT+VNK LMGPIV KLVQQEKLE
Sbjct: 1    MASKLIISPFTLIYYTYQCFQSTGWLGPMSIFGYFILGTLVNKTLMGPIVAKLVQQEKLE 60

Query: 764  GDFRFKHMQIRVNAEPAAFFRAGHVEHVXXXXXXXXXXXXXXELMSKELWLYIGVNTFDY 943
            GDFRFKHMQIRVNAE AAFFRAGHVEH               ELMSKELWLYIGVNTFDY
Sbjct: 61   GDFRFKHMQIRVNAESAAFFRAGHVEHTRTDRRLQRLLQTQRELMSKELWLYIGVNTFDY 120

Query: 944  LGSILSYVVIAIPIFSGVYGDLSPTELSTLVSKNAFVCMYLISCFTRLIDLSTPLSDVAS 1123
            LGSILSYVVIAIPIFSGVYGDLSPTELSTLVSKNAFVC+YLISCFTRLIDLS+ LSDVA 
Sbjct: 121  LGSILSYVVIAIPIFSGVYGDLSPTELSTLVSKNAFVCIYLISCFTRLIDLSSTLSDVAG 180

Query: 1124 YTHRIGELRETLLDLALKSQEGEIQDESTWDLARAPGWPAVEPTGTAFLLEQVCISAPSS 1303
            YTHRIGEL+ETLLD++LK + GEI DES W++ RAPGWPA EP  TAFLLE+V + APSS
Sbjct: 181  YTHRIGELQETLLDMSLKLRGGEILDESEWNMDRAPGWPAAEPADTAFLLERVSVCAPSS 240

Query: 1304 NKPLIQDLNLKICQGQNLLITGNTCTGKTSLLPILGSL 1417
            +KPLI+DL+LKI +GQ+LLITGNT TGK+SLL +LG L
Sbjct: 241  HKPLIKDLSLKISEGQSLLITGNTGTGKSSLLRVLGGL 278



 Score = 31.6 bits (70), Expect(2) = e-127
 Identities = 13/15 (86%), Positives = 14/15 (93%)
 Frame = +1

Query: 1441 LQMPTDFGPHGVLFL 1485
            +QM TDFGPHGVLFL
Sbjct: 286  VQMLTDFGPHGVLFL 300


>ref|XP_868000.1| PREDICTED: similar to ATP-binding cassette, sub-family D, member 4
            isoform 2 isoform 2 [Canis familiaris].
          Length = 447

 Score =  445 bits (1145), Expect(2) = e-127
 Identities = 222/278 (79%), Positives = 243/278 (87%)
 Frame = +2

Query: 584  MVSKLIISPFTLVYYTYQCFQSTGWLGPVSIFGYFIVGTMVNKMLMGPIVVKLVQQEKLE 763
            M SKLIISPFTL+YYTYQCFQSTGWLGP+SIFGYFI+GT+VNK LMGPIV KLVQQEKLE
Sbjct: 1    MASKLIISPFTLIYYTYQCFQSTGWLGPMSIFGYFILGTLVNKTLMGPIVAKLVQQEKLE 60

Query: 764  GDFRFKHMQIRVNAEPAAFFRAGHVEHVXXXXXXXXXXXXXXELMSKELWLYIGVNTFDY 943
            GDFRFKHMQIRVNAE AAFFRAGHVEH               ELMSKELWLYIGVNTFDY
Sbjct: 61   GDFRFKHMQIRVNAESAAFFRAGHVEHTRTDRRLQRLLQTQRELMSKELWLYIGVNTFDY 120

Query: 944  LGSILSYVVIAIPIFSGVYGDLSPTELSTLVSKNAFVCMYLISCFTRLIDLSTPLSDVAS 1123
            LGSILSYVVIAIPIFSGVYGDLSPTELSTLVSKNAFVC+YLISCFTRLIDLS+ LSDVA 
Sbjct: 121  LGSILSYVVIAIPIFSGVYGDLSPTELSTLVSKNAFVCIYLISCFTRLIDLSSTLSDVAG 180

Query: 1124 YTHRIGELRETLLDLALKSQEGEIQDESTWDLARAPGWPAVEPTGTAFLLEQVCISAPSS 1303
            YTHRIGEL+ETLLD++LK + GEI DES W++ RAPGWPA EP  TAFLLE+V + APSS
Sbjct: 181  YTHRIGELQETLLDMSLKLRGGEILDESEWNMDRAPGWPAAEPADTAFLLERVSVCAPSS 240

Query: 1304 NKPLIQDLNLKICQGQNLLITGNTCTGKTSLLPILGSL 1417
            +KPLI+DL+LKI +GQ+LLITGNT TGK+SLL +LG L
Sbjct: 241  HKPLIKDLSLKISEGQSLLITGNTGTGKSSLLRVLGGL 278



 Score = 31.6 bits (70), Expect(2) = e-127
 Identities = 13/15 (86%), Positives = 14/15 (93%)
 Frame = +1

Query: 1441 LQMPTDFGPHGVLFL 1485
            +QM TDFGPHGVLFL
Sbjct: 286  VQMLTDFGPHGVLFL 300


>ref|XP_537064.2| PREDICTED: similar to ATP-binding cassette, sub-family D, member 3
            (70 kDa peroxisomal membrane protein) (PMP70) [Canis
            familiaris].
          Length = 628

 Score =  124 bits (311), Expect = 2e-28
 Identities = 106/416 (25%), Positives = 189/416 (45%), Gaps = 21/416 (5%)
 Frame = +2

Query: 233  FLTLVCVALLEQL-----VIYRVGLIPSQYFGVLGSKDLSGFKTLTFLAVTLIILNSMLK 397
            +L L+ V L+ +      +I    LI S   G++G +    FK   F  +  + L S++ 
Sbjct: 53   YLVLIAVMLVSRTYCDVWMIQNGTLIES---GIIG-RSRKDFKRYLFNFIAAMPLISVVN 108

Query: 398  SFNQFISSLLYVSWRKDLTEHLHHLYFRGRVYYTLNVLRDDVDNPDQRISQDVERFCRQL 577
            +F +F  + L + +R  LT++L+  Y +   YY +  L + + NPDQ ++QDVE+FC  +
Sbjct: 109  NFLKFGLNELKLCFRVRLTKYLYEEYLQAFTYYKMGNLDNRIANPDQLLTQDVEKFCNSV 168

Query: 578  SSMVSKLIISPFTLVYYTYQCFQSTGWLGPVSIFGYFIVGTMVNKMLMGPIVVKLVQQEK 757
              + S L      +V Y ++   + G  GP S+  Y IV  +    L  PI    + ++K
Sbjct: 169  VDLYSNLSKPFLDIVLYIFKLTSAIGAQGPTSMMAYLIVSGLFLTRLRRPIGKMTITEQK 228

Query: 758  LEGDFRFKHMQIRVNAEPAAFFRAGHVEHVXXXXXXXXXXXXXXELMSKELWL-YIGVNT 934
             EG++RF + ++  N+E  AF+     E                  +     + +I    
Sbjct: 229  YEGEYRFVNSRLITNSEEIAFYNGNKREKQTIHSVFRKLVEHLHNFILFRFSMGFIDSIV 288

Query: 935  FDYLGSILSYVVIAIPIFSGVYGDLS-PTELSTLVS-------KNAFVCMYLISCFTRLI 1090
              YL +++ Y+V++ P       DLS P  L +  S       ++  + + +     R++
Sbjct: 289  AKYLATVVGYLVVSRPFL-----DLSHPRHLKSTHSELLEDYYQSGRMLLRMSQALGRIV 343

Query: 1091 DLSTPLSDVASYTHRIGELRETLLDL-------ALKSQEGEIQDESTWDLARAPGWPAVE 1249
                 ++ +A +T RI EL + L DL        + SQ+    +E    +   PG   + 
Sbjct: 344  LAGREMTRLAGFTARITELMQVLKDLNQGKYERTMVSQQERGIEEGAHFIPLIPGAGEII 403

Query: 1250 PTGTAFLLEQVCISAPSSNKPLIQDLNLKICQGQNLLITGNTCTGKTSLLPILGSL 1417
                    + V ++ P+ +  LI+DLN ++  G N+LI G    GK+SL  +LG L
Sbjct: 404  NADNIIKFDHVPLATPNGD-ILIRDLNFEVRSGANVLICGPNGCGKSSLFRVLGEL 458


>ref|XP_534838.1| PREDICTED: similar to ATP-binding cassette, sub-family D, member 2
            (Adrenoleukodystrophy related protein) (hALDR)
            (Adrenoleukodystrophy-like 1) isoform 1 [Canis
            familiaris].
          Length = 742

 Score = 98.6 bits (244), Expect = 1e-20
 Identities = 111/459 (24%), Positives = 195/459 (42%), Gaps = 42/459 (9%)
 Frame = +2

Query: 191  KVLFPAWSSQNALMFLTLVCVALLEQ--LVIYRVGLIPSQYFGVLGSKDLSGFKTLT--- 355
            K+LFP   +     +L L  VAL+ +  L IY  GL       ++  K  +    L    
Sbjct: 93   KILFPKLVTTET-GWLCLHSVALISRTFLSIYVAGLDGKIVKSIVEKKPRTFIIKLIKWL 151

Query: 356  FLAVTLIILNSMLKSFNQFISSLLYVSWRKDLTEHLHHLYFRGRVYYTLNVLRDDVDNPD 535
             +A+    +NS ++    ++   L +++R  L +H +  YF  + YY +  +   + NPD
Sbjct: 152  MIAIPATFVNSAIR----YLECKLALAFRTRLVDHAYETYFTNQTYYKVINMDGRLANPD 207

Query: 536  QRISQDVERFCRQLSSMVSKLIISPFTLVYYTYQCFQS-----TGWLGPVSIFGYFIVGT 700
            Q +++D+  F + ++ + S L      ++  +Y   Q+        +GP  + G  +  T
Sbjct: 208  QSLTEDIMMFSQSVAHLYSNLTKPILDVILTSYTLIQTATSRGASPIGPTLLAGLVVYAT 267

Query: 701  MVNKMLMGPIVVKLVQQE-KLEGDFRFKHMQIRVNAEPAAFFRAGHVEHVXXXXXXXXXX 877
                    P   KLV +E   +G  R+ H +I  N E  AF+R   VE            
Sbjct: 268  AKVLKACSPKFGKLVAEEAHRKGYLRYVHSRIIANVEEIAFYRGHKVEMKQLQKSYKALA 327

Query: 878  XXXXELMSKELWLYIGVNTF--DYLGSILSYVVIAIPIFSG---VYGDLSPTELSTLVSK 1042
                 ++SK LW YI +  F   Y+ S    +++A+PI +      GDL   +   +VS+
Sbjct: 328  DQMNLILSKRLW-YIMIEQFLMKYVWSSSGLIMVAVPIITATGFADGDLEDGQKQAMVSE 386

Query: 1043 --NAFVCMYLI-----SCFTRLIDLSTPLSDVASYTHRI-------GELRETLLDLALKS 1180
               AF     +         R++     ++++A YT R+        E++  +   A   
Sbjct: 387  RTEAFTTARNLLASGADAIERIMSSYKEITELAGYTARVYNMFWVFDEVKRGIYKRAAVM 446

Query: 1181 QEGEIQDESTWDLARAPGWPAVEPTGTAFLLEQ--VCISAP---SSNKPLIQDLNLKICQ 1345
            QE E   ++  ++   P    +E  G    ++   +C + P    + + +   LN K+ +
Sbjct: 447  QESESHSKNGANI-DLPLTDTLEIKGRVIDVDHGIICENVPIITPTGEVVASRLNFKVQE 505

Query: 1346 GQNLLITGNTCTGKTSLLPILGSL-------LGEPTPLH 1441
            G +LLITG    GK+SL  IL  L       L +P P H
Sbjct: 506  GMHLLITGPNGCGKSSLFRILSGLWPVYEGVLYKPPPQH 544


>ref|XP_864684.1| PREDICTED: similar to ATP-binding cassette, sub-family D, member 2
            (Adrenoleukodystrophy related protein) (hALDR)
            (Adrenoleukodystrophy-like 1) isoform 2 [Canis
            familiaris].
          Length = 665

 Score = 94.7 bits (234), Expect = 2e-19
 Identities = 111/458 (24%), Positives = 194/458 (42%), Gaps = 41/458 (8%)
 Frame = +2

Query: 191  KVLFPAWSSQNALMFLTLVCVALLEQ--LVIYRVGLIPSQYFGVLGSKDLSGFKTLT--- 355
            K+LFP   +     +L L  VAL+ +  L IY  GL       ++  K  +    L    
Sbjct: 93   KILFPKLVTTET-GWLCLHSVALISRTFLSIYVAGLDGKIVKSIVEKKPRTFIIKLIKWL 151

Query: 356  FLAVTLIILNSMLKSFNQFISSLLYVSWRKDLTEHLHHLYFRGRVYYTLNVLRDDVDNPD 535
             +A+    +NS ++    ++   L +++R  L +H +  YF  + YY +  +   + NPD
Sbjct: 152  MIAIPATFVNSAIR----YLECKLALAFRTRLVDHAYETYFTNQTYYKVINMDGRLANPD 207

Query: 536  QRISQDVERFCRQLSSMVSKLIISPFTLVYYTYQCFQS-----TGWLGPVSIFGYFIVGT 700
            Q +++D+  F + ++ + S L      ++  +Y   Q+        +GP  + G  +  T
Sbjct: 208  QSLTEDIMMFSQSVAHLYSNLTKPILDVILTSYTLIQTATSRGASPIGPTLLAGLVVYAT 267

Query: 701  MVNKMLMGPIVVKLVQQE-KLEGDFRFKHMQIRVNAEPAAFFRAGHVEHVXXXXXXXXXX 877
                    P   KLV +E   +G  R+ H +I  N E  AF+R   VE            
Sbjct: 268  AKVLKACSPKFGKLVAEEAHRKGYLRYVHSRIIANVEEIAFYRGHKVEMKQLQKSYKALA 327

Query: 878  XXXXELMSKELWLYIGVNTF--DYLGSILSYVVIAIPIFSGV-YGDL------SPTELST 1030
                 ++SK LW YI +  F   Y+ S    +++A+PI +   + D+      S +  S+
Sbjct: 328  DQMNLILSKRLW-YIMIEQFLMKYVWSSSGLIMVAVPIITATGFADVFLGSVPSLSIQSS 386

Query: 1031 LVSK--NAFVCMYLI-----SCFTRLIDLSTPLSDVASYTHRI-------GELRETLLDL 1168
            +VS+   AF     +         R++     ++++A YT R+        E++  +   
Sbjct: 387  MVSERTEAFTTARNLLASGADAIERIMSSYKEITELAGYTARVYNMFWVFDEVKRGIYKR 446

Query: 1169 ALKSQEGEIQDESTWDLARAPGWPAVEPTGTAFLLEQVCISAPSSNKPLIQDLNLKICQG 1348
            A   QE E   ++  ++        V       + E V I  P + + +   LN K+ +G
Sbjct: 447  AAVMQESESHSKNGANIVLG----RVIDVDHGIICENVPIITP-TGEVVASRLNFKVQEG 501

Query: 1349 QNLLITGNTCTGKTSLLPILGSL-------LGEPTPLH 1441
             +LLITG    GK+SL  IL  L       L +P P H
Sbjct: 502  MHLLITGPNGCGKSSLFRILSGLWPVYEGVLYKPPPQH 539


>ref|XP_855341.1| PREDICTED: similar to ATP-binding cassette, sub-family D, member 1
            (Adrenoleukodystrophy protein) (ALDP) [Canis familiaris].
          Length = 746

 Score = 93.2 bits (230), Expect = 6e-19
 Identities = 98/398 (24%), Positives = 178/398 (44%), Gaps = 38/398 (9%)
 Frame = +2

Query: 338  GFKTLTFLAVTLIILNSMLKSFNQFISSLLYVSWRKDLTEHLHHLYFRGRVYYTLNVLRD 517
            G++ L +L + L    + + S  +++   L +S+R  L  H + LYF  + YY ++ +  
Sbjct: 131  GWQLLQWLLIALPA--TFINSAIRYLEGQLALSFRSRLVAHAYSLYFSQQTYYRVSNMDG 188

Query: 518  DVDNPDQRISQDVERFCRQLSSMVSKL-------IISPFTLVYYTYQCFQSTGWLGPVSI 676
             + NPDQ +++DV  F   ++ + S L        ++ +TL+         T W  P +I
Sbjct: 189  RLRNPDQSLTEDVVAFAASVAHLYSNLTKPLLDVAVTAYTLLRAARSRGAGTAW--PSAI 246

Query: 677  FGYFIVGTMVNKMLMGPIVVKLVQQE-KLEGDFRFKHMQIRVNAEPAAFFRAGHVEHVXX 853
             G  +  T        P   +LV +E + +G+ R+ H ++  N+E  AF+    VE    
Sbjct: 247  AGLVVFLTANVLRAFSPKFGELVAEEARRKGELRYMHSRVVANSEEIAFYGGHEVELALL 306

Query: 854  XXXXXXXXXXXXELMSKELWLYIGVNTF--DYLGSILSYVVIAIPIFSGVYGDLSPTEL- 1024
                         ++ + LW YI +  F   Y+ S    +++A+PI +      S +E  
Sbjct: 307  QHSYQDLASQINLILLERLW-YIMLEQFLMKYVWSASGLLMVAVPIITATGYSESDSEAV 365

Query: 1025 ---------STLVSK--NAF-VCMYLIS----CFTRLIDLSTPLSDVASYTHRIGELRET 1156
                       LVS+   AF +   L++       R++     ++++A YT R+ E+ + 
Sbjct: 366  KKAALEMREEELVSERTEAFTIARNLLTAAADAIERIMSSYKEVTELAGYTARVHEMFQV 425

Query: 1157 LLDL--ALKSQEGEIQDESTWDLARAPGWPAVEP----TGTAFLLEQ--VCISAP---SS 1303
              D+      + GE++D      A A     VE      G    +EQ  +C + P    +
Sbjct: 426  FEDVQHCRFKRPGELEDTQAGPGAVARSGVHVEGPLQIRGQVVDVEQGIICENIPIITPT 485

Query: 1304 NKPLIQDLNLKICQGQNLLITGNTCTGKTSLLPILGSL 1417
             + ++  LN+++ +G +LLITG    GK+SL  ILG L
Sbjct: 486  GEVVVASLNIRVEEGMHLLITGPNGCGKSSLFRILGGL 523


>ref|XP_864706.1| PREDICTED: similar to ATP-binding cassette, sub-family D, member 2
            (Adrenoleukodystrophy related protein) (hALDR)
            (Adrenoleukodystrophy-like 1) isoform 3 [Canis
            familiaris].
          Length = 677

 Score = 90.5 bits (223), Expect = 4e-18
 Identities = 111/466 (23%), Positives = 196/466 (42%), Gaps = 49/466 (10%)
 Frame = +2

Query: 191  KVLFPAWSSQNALMFLTLVCVALLEQ--LVIYRVGLIPSQYFGVLGSKDLSGFKTLT--- 355
            K+LFP   +     +L L  VAL+ +  L IY  GL       ++  K  +    L    
Sbjct: 93   KILFPKLVTTET-GWLCLHSVALISRTFLSIYVAGLDGKIVKSIVEKKPRTFIIKLIKWL 151

Query: 356  FLAVTLIILNSMLKSFNQFISSLLYVSWRKDLTEHLHHLYFRGRVYYTLNVLRDDVDNPD 535
             +A+    +NS ++    ++   L +++R  L +H +  YF  + YY +  +   + NPD
Sbjct: 152  MIAIPATFVNSAIR----YLECKLALAFRTRLVDHAYETYFTNQTYYKVINMDGRLANPD 207

Query: 536  QRISQDVERFCRQLSSMVSKLIISPFTLVYYTYQCFQS-----TGWLGPVSIFGYFIVGT 700
            Q +++D+  F + ++ + S L      ++  +Y   Q+        +GP  + G  +  T
Sbjct: 208  QSLTEDIMMFSQSVAHLYSNLTKPILDVILTSYTLIQTATSRGASPIGPTLLAGLVVYAT 267

Query: 701  MVNKMLMGPIVVKLVQQE-KLEGDFRFKHMQIRVNAEPAAFFRAGHVEHVXXXXXXXXXX 877
                    P   KLV +E   +G  R+ H +I  N E  AF+R   VE            
Sbjct: 268  AKVLKACSPKFGKLVAEEAHRKGYLRYVHSRIIANVEEIAFYRGHKVEMKQLQKSYKALA 327

Query: 878  XXXXELMSKELWLYIGVNTF--DYLGSILSYVVIAIPIFS------GVYGDLS----PTE 1021
                 ++SK LW YI +  F   Y+ S    +++A+PI +      GV+   S      +
Sbjct: 328  DQMNLILSKRLW-YIMIEQFLMKYVWSSSGLIMVAVPIITATGFADGVFPLYSYLFKDGQ 386

Query: 1022 LSTLVSK--NAFVCMYLI-----SCFTRLIDLSTPLSDVASYTHRI-------GELRETL 1159
               +VS+   AF     +         R++     ++++A YT R+        E++  +
Sbjct: 387  KQAMVSERTEAFTTARNLLASGADAIERIMSSYKEITELAGYTARVYNMFWVFDEVKRGI 446

Query: 1160 LDLALKSQEGEIQDESTWDLARAPGWPAVEPTGTAFLLEQ--VCISAP---SSNKPLIQD 1324
               A   QE E   ++  ++   P    +E  G    ++   +C + P    + + +   
Sbjct: 447  YKRAAVMQESESHSKNGANI-DLPLTDTLEIKGRVIDVDHGIICENVPIITPTGEVVASR 505

Query: 1325 LNLKICQGQNLLITGNTCTGKTSLLPILGSL-------LGEPTPLH 1441
            LN K+ +G +LLITG    GK+SL  IL  L       L +P P H
Sbjct: 506  LNFKVQEGMHLLITGPNGCGKSSLFRILSGLWPVYEGVLYKPPPQH 551


  Database: RefSeq49_CP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 18,874,504
  Number of sequences in database:  33,336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33336
Number of Hits to DB: 61,676,891
Number of extensions: 1889826
Number of successful extensions: 9530
Number of sequences better than 1.0e-05: 9
Number of HSP's gapped: 9451
Number of HSP's successfully gapped: 13
Length of query: 495
Length of database: 18,874,504
Length adjustment: 107
Effective length of query: 388
Effective length of database: 15,307,552
Effective search space: 5939330176
Effective search space used: 5939330176
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-013709
         (1487 letters)

Database: RefSeq49_BP.fasta 
           33,088 sequences; 17,681,374 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_001098866.1| ATP-binding cassette sub-family D member 3 [...   129   5e-30
Alignment   gi|NP_001039655.1| ATP-binding cassette sub-family D member 1 [...    89   1e-17
Alignment   gi|NP_001092507.1| ATP-binding cassette, sub-family D, member 2...    75   2e-13

>ref|NP_001098866.1| ATP-binding cassette sub-family D member 3 [Bos taurus].
          Length = 656

 Score =  129 bits (325), Expect = 5e-30
 Identities = 104/419 (24%), Positives = 192/419 (45%), Gaps = 24/419 (5%)
 Frame = +2

Query: 233  FLTLVCVALLEQL-----VIYRVGLIPSQYFGVLGSKDLSGFKTLTFLAVTLIILNSMLK 397
            +L L+ V L+ +      +I    LI S   G++G +    FK   F  +  + L S++ 
Sbjct: 85   YLILIAVMLVSRTFCDVWMIQNGTLIES---GIIG-RSRKDFKKYLFNFIAAMPLISLVN 140

Query: 398  SFNQFISSLLYVSWRKDLTEHLHHLYFRGRVYYTLNVLRDDVDNPDQRISQDVERFCRQL 577
            +F +F  + L + +R  LT++L+  Y +   YY +  L + + NPDQ ++QDVE+FC  +
Sbjct: 141  NFLKFGLNELKLCFRVRLTKYLYEEYLQAFTYYKMGNLDNRIANPDQLLTQDVEKFCNSV 200

Query: 578  SSMVSKLIISPFTLVYYTYQCFQSTGWLGPVSIFGYFIVGTMVNKMLMGPIVVKLVQQEK 757
              + S L      +V Y ++   + G  GP S+  Y +V  +    +  PI    + ++K
Sbjct: 201  VDLYSNLSKPFLDIVLYIFRLTSAIGAQGPASMMAYLLVSGLFLTRIRRPIGKMTITEQK 260

Query: 758  LEGDFRFKHMQIRVNAEPAAFFRAGH-------------VEHVXXXXXXXXXXXXXXELM 898
            LEG++R+ + ++  N+E  AF+                 VEH+               ++
Sbjct: 261  LEGEYRYVNSRLITNSEEVAFYNGNKREKQTIHSVFQKLVEHLHNFILFRFSMGFIDSII 320

Query: 899  SKELWLYIGVNTFDYLGSILSYVVIAIPIFSGVYG---DLSPTELSTLVSKNAFVCMYLI 1069
            +K            YL +++ Y+V++ P     +      S +EL     ++  + + + 
Sbjct: 321  AK------------YLATVVGYLVVSRPFLDLAHPRHLKSSHSELLEDYYQSGRMLLRMS 368

Query: 1070 SCFTRLIDLSTPLSDVASYTHRIGELRETLLDLALKSQEGEI---QDESTWDLARAPGWP 1240
                R++     ++ +A +T RI EL + L DL     E  +   Q++   D+   PG  
Sbjct: 369  QALGRIVLAGREMTRLAGFTARITELMQVLKDLNQGKYERTMVSQQEKGAQDIPLIPGIG 428

Query: 1241 AVEPTGTAFLLEQVCISAPSSNKPLIQDLNLKICQGQNLLITGNTCTGKTSLLPILGSL 1417
             +  T      + V ++ P+ +  LI+DLN ++  G N+LI G    GK+SL  +LG L
Sbjct: 429  EIINTDNIIKFDHVPLATPNGD-ILIRDLNFEVRSGANVLICGPNGCGKSSLFRVLGEL 486


>ref|NP_001039655.1| ATP-binding cassette sub-family D member 1 [Bos taurus].
          Length = 737

 Score = 89.0 bits (219), Expect = 1e-17
 Identities = 94/393 (23%), Positives = 168/393 (42%), Gaps = 40/393 (10%)
 Frame = +2

Query: 359  LAVTLIILNSMLKSFNQFISSLLYVSWRKDLTEHLHHLYFRGRVYYTLNVLRDDVDNPDQ 538
            +A+    +NS ++    ++   L +++R  L  H + LYF  + YY ++ +   + NPDQ
Sbjct: 145  IALPATFINSAIR----YLEGQLALAFRSRLVAHAYSLYFSQQTYYRVSNMDGRLRNPDQ 200

Query: 539  RISQDVERFCRQLSSMVSKL-------IISPFTLVYYTYQCFQSTGWLGPVSIFGYFIVG 697
             +++DV  F   ++ + S L        ++ +TLV         T W  P +I G  +  
Sbjct: 201  SLTEDVVAFAASVAHLYSNLTKPLLDVAVTTYTLVRAARSRGAGTAW--PSAIAGLVVFL 258

Query: 698  TMVNKMLMGPIVVKLVQQE-KLEGDFRFKHMQIRVNAEPAAFFRAGHVEHVXXXXXXXXX 874
            T        P   +LV +E + +G+ R+ H ++  N+E  AF+    VE           
Sbjct: 259  TANVLRAFSPKFGELVAEEARRKGELRYMHSRVVANSEEIAFYGGHEVELALLQHSYQDL 318

Query: 875  XXXXXELMSKELWLYIGVNTF--DYLGSILSYVVIAIPIFSGV---YGDLSPTELSTLVS 1039
                  ++ + LW Y+ +  F   Y+ S    +++A+PI +       D    + +    
Sbjct: 319  ASQINLILLERLW-YVMLEQFLMKYVWSASGLLMVAVPIITATGYSESDSETVKKAAQAM 377

Query: 1040 KNAFVCMYLISCFTRLIDLSTPLSD--------------VASYTHRIGELRETLLDL--A 1171
            K   +       FT   +L T  +D              +A YT R+ E+ +   D+   
Sbjct: 378  KEGELVSERTEAFTIARNLLTAAADAIERVMSSYKEVTELAGYTARVYEMFQVFEDVQQC 437

Query: 1172 LKSQEGEIQDESTWDLA------RAPGWPAVEPTGTAFLLEQ--VCISAP---SSNKPLI 1318
               + GE +D  T   A      R  G   ++  G    +EQ  VC + P    + + ++
Sbjct: 438  RFKRPGEPEDAHTGSGAIMRSGIRMEG--PLQIRGQVVDVEQGIVCENIPIITPTGEVVV 495

Query: 1319 QDLNLKICQGQNLLITGNTCTGKTSLLPILGSL 1417
              LN+++ +G +LLITG    GK+SL  ILG L
Sbjct: 496  ASLNIRVEEGMHLLITGPNGCGKSSLFRILGGL 528


>ref|NP_001092507.1| ATP-binding cassette, sub-family D, member 2 [Bos taurus].
          Length = 380

 Score = 75.1 bits (183), Expect = 2e-13
 Identities = 69/280 (24%), Positives = 122/280 (43%), Gaps = 13/280 (4%)
 Frame = +2

Query: 191 KVLFPAWSSQNALMFLTLVCVALLEQ--LVIYRVGLIPSQYFGVLGSKDLSGFKTLT--- 355
           K+LFP   +     +L L  VAL+ +  L IY  GL       ++  K  +    L    
Sbjct: 92  KILFPKLVTTET-GWLCLHSVALISRTFLSIYVAGLDGKIVKSIVEKKPRTFIIKLIKWL 150

Query: 356 FLAVTLIILNSMLKSFNQFISSLLYVSWRKDLTEHLHHLYFRGRVYYTLNVLRDDVDNPD 535
            +A+    +NS ++    ++   L +++R  L +H +  YF  + YY +  +   + NPD
Sbjct: 151 MIAIPATFVNSAIR----YLEGKLALAFRTRLVDHAYETYFANQTYYKVINMDGRLANPD 206

Query: 536 QRISQDVERFCRQLSSMVSKLIISPFTLVYYTYQCFQS-----TGWLGPVSIFGYFIVGT 700
           Q +++D+  F + ++ + S L      ++  +Y   Q+        +GP  + G  +  T
Sbjct: 207 QSLTEDIMMFAQSVAHLYSNLTKPILDVILTSYTLIQTATSRGASPIGPTVLAGLVVYAT 266

Query: 701 MVNKMLMGPIVVKLVQQE-KLEGDFRFKHMQIRVNAEPAAFFRAGHVEHVXXXXXXXXXX 877
                   P   KLV +E   +G  R+ H +I  N E  AF+R   VE            
Sbjct: 267 AKVLKACSPKFGKLVAEEAHRKGYLRYVHSRIIANVEEIAFYRGHKVEMNQLQKSYKALA 326

Query: 878 XXXXELMSKELWLYIGVNTF--DYLGSILSYVVIAIPIFS 991
                ++SK LW YI +  F   Y+ S    +++A+PI +
Sbjct: 327 NQMNLILSKRLW-YIMIEQFLMKYVWSSSGLIMVAVPIIT 365


  Database: RefSeq49_BP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 17,681,374
  Number of sequences in database:  33,088
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33088
Number of Hits to DB: 59,416,820
Number of extensions: 1865120
Number of successful extensions: 9248
Number of sequences better than 1.0e-05: 3
Number of HSP's gapped: 9134
Number of HSP's successfully gapped: 3
Length of query: 495
Length of database: 17,681,374
Length adjustment: 106
Effective length of query: 389
Effective length of database: 14,174,046
Effective search space: 5513703894
Effective search space used: 5513703894
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-013709
         (1487 letters)

Database: RefSeq49_SP.fasta 
           24,897 sequences; 11,343,932 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|XP_001929268.1| PREDICTED: ATP-binding cassette sub-family D...   765   0.0  
Alignment   gi|XP_001929231.1| PREDICTED: ATP-binding cassette sub-family D...   765   0.0  
Alignment   gi|XP_003355337.1| PREDICTED: ATP-binding cassette sub-family D...   120   2e-27
Alignment   gi|XP_003360824.1| PREDICTED: ATP-binding cassette sub-family D...    99   5e-21
Alignment   gi|XP_003126652.1| PREDICTED: ATP-binding cassette sub-family D...    93   4e-19
Alignment   gi|XP_003135521.2| PREDICTED: ATP-binding cassette sub-family D...    89   5e-18

>ref|XP_001929268.1| PREDICTED: ATP-binding cassette sub-family D member 4-like [Sus
            scrofa].
          Length = 606

 Score =  765 bits (1976), Expect(2) = 0.0
 Identities = 387/413 (93%), Positives = 391/413 (94%)
 Frame = +2

Query: 191  KVLFPAWSSQNALMFLTLVCVALLEQLVIYRVGLIPSQYFGVLGSKDLSGFKTLTFLAVT 370
            KVLFPAWSSQNALMFLTLVCVALLEQLVIYRVGLIPSQYFGVLGSKDLSGFKTLTFLAVT
Sbjct: 29   KVLFPAWSSQNALMFLTLVCVALLEQLVIYRVGLIPSQYFGVLGSKDLSGFKTLTFLAVT 88

Query: 371  LIILNSMLKSFNQFISSLLYVSWRKDLTEHLHHLYFRGRVYYTLNVLRDDVDNPDQRISQ 550
            LIILNSMLKSFNQFISSLLYVSWRKDLTEHLHHLYFRGRVYYTLNVLRDDVDNPDQRISQ
Sbjct: 89   LIILNSMLKSFNQFISSLLYVSWRKDLTEHLHHLYFRGRVYYTLNVLRDDVDNPDQRISQ 148

Query: 551  DVERFCRQLSSMVSKLIISPFTLVYYTYQCFQSTGWLGPVSIFGYFIVGTMVNKMLMGPI 730
            DVERFCRQLSSMVSKLIISPFTLVYYTYQCFQSTGWLGPVSIFGYFIVGTMVNKMLMGPI
Sbjct: 149  DVERFCRQLSSMVSKLIISPFTLVYYTYQCFQSTGWLGPVSIFGYFIVGTMVNKMLMGPI 208

Query: 731  VVKLVQQEKLEGDFRFKHMQIRVNAEPAAFFRAGHVEHVXXXXXXXXXXXXXXELMSKEL 910
            VVKLVQQEKLEGDFRFKHMQIRVNAEPAAFFRAGHVEHV              ELMSKEL
Sbjct: 209  VVKLVQQEKLEGDFRFKHMQIRVNAEPAAFFRAGHVEHVRTDRRLQRLLRTQRELMSKEL 268

Query: 911  WLYIGVNTFDYLGSILSYVVIAIPIFSGVYGDLSPTELSTLVSKNAFVCMYLISCFTRLI 1090
            WLYIGVNTFDYLGSILSYVVIAIPIFSGVYGDLSPTELSTLVSKN FVCMYLISCFTRLI
Sbjct: 269  WLYIGVNTFDYLGSILSYVVIAIPIFSGVYGDLSPTELSTLVSKNTFVCMYLISCFTRLI 328

Query: 1091 DLSTPLSDVASYTHRIGELRETLLDLALKSQEGEIQDESTWDLARAPGWPAVEPTGTAFL 1270
            DLSTPLSDVA YTHRIGELRETLLDLALKSQEGEIQDESTWDLARAPGWPAVEPTGTAFL
Sbjct: 329  DLSTPLSDVAGYTHRIGELRETLLDLALKSQEGEIQDESTWDLARAPGWPAVEPTGTAFL 388

Query: 1271 LEQVCISAPSSNKPLIQDLNLKICQGQNLLITGNTCTGKTSLLPILGSLLGEP 1429
            LEQVCISAPSSNKPLI+DL+LKIC+GQ+LLITGNT TGKTSLL ILG L   P
Sbjct: 389  LEQVCISAPSSNKPLIKDLSLKICEGQSLLITGNTGTGKTSLLRILGGLWASP 441



 Score = 31.6 bits (70), Expect(2) = 0.0
 Identities = 13/15 (86%), Positives = 14/15 (93%)
 Frame = +1

Query: 1441 LQMPTDFGPHGVLFL 1485
            +QM TDFGPHGVLFL
Sbjct: 445  VQMLTDFGPHGVLFL 459


>ref|XP_001929231.1| PREDICTED: ATP-binding cassette sub-family D member 4-like [Sus
            scrofa].
          Length = 606

 Score =  765 bits (1976), Expect(2) = 0.0
 Identities = 387/413 (93%), Positives = 391/413 (94%)
 Frame = +2

Query: 191  KVLFPAWSSQNALMFLTLVCVALLEQLVIYRVGLIPSQYFGVLGSKDLSGFKTLTFLAVT 370
            KVLFPAWSSQNALMFLTLVCVALLEQLVIYRVGLIPSQYFGVLGSKDLSGFKTLTFLAVT
Sbjct: 29   KVLFPAWSSQNALMFLTLVCVALLEQLVIYRVGLIPSQYFGVLGSKDLSGFKTLTFLAVT 88

Query: 371  LIILNSMLKSFNQFISSLLYVSWRKDLTEHLHHLYFRGRVYYTLNVLRDDVDNPDQRISQ 550
            LIILNSMLKSFNQFISSLLYVSWRKDLTEHLHHLYFRGRVYYTLNVLRDDVDNPDQRISQ
Sbjct: 89   LIILNSMLKSFNQFISSLLYVSWRKDLTEHLHHLYFRGRVYYTLNVLRDDVDNPDQRISQ 148

Query: 551  DVERFCRQLSSMVSKLIISPFTLVYYTYQCFQSTGWLGPVSIFGYFIVGTMVNKMLMGPI 730
            DVERFCRQLSSMVSKLIISPFTLVYYTYQCFQSTGWLGPVSIFGYFIVGTMVNKMLMGPI
Sbjct: 149  DVERFCRQLSSMVSKLIISPFTLVYYTYQCFQSTGWLGPVSIFGYFIVGTMVNKMLMGPI 208

Query: 731  VVKLVQQEKLEGDFRFKHMQIRVNAEPAAFFRAGHVEHVXXXXXXXXXXXXXXELMSKEL 910
            VVKLVQQEKLEGDFRFKHMQIRVNAEPAAFFRAGHVEHV              ELMSKEL
Sbjct: 209  VVKLVQQEKLEGDFRFKHMQIRVNAEPAAFFRAGHVEHVRTDRRLQRLLRTQRELMSKEL 268

Query: 911  WLYIGVNTFDYLGSILSYVVIAIPIFSGVYGDLSPTELSTLVSKNAFVCMYLISCFTRLI 1090
            WLYIGVNTFDYLGSILSYVVIAIPIFSGVYGDLSPTELSTLVSKN FVCMYLISCFTRLI
Sbjct: 269  WLYIGVNTFDYLGSILSYVVIAIPIFSGVYGDLSPTELSTLVSKNTFVCMYLISCFTRLI 328

Query: 1091 DLSTPLSDVASYTHRIGELRETLLDLALKSQEGEIQDESTWDLARAPGWPAVEPTGTAFL 1270
            DLSTPLSDVA YTHRIGELRETLLDLALKSQEGEIQDESTWDLARAPGWPAVEPTGTAFL
Sbjct: 329  DLSTPLSDVAGYTHRIGELRETLLDLALKSQEGEIQDESTWDLARAPGWPAVEPTGTAFL 388

Query: 1271 LEQVCISAPSSNKPLIQDLNLKICQGQNLLITGNTCTGKTSLLPILGSLLGEP 1429
            LEQVCISAPSSNKPLI+DL+LKIC+GQ+LLITGNT TGKTSLL ILG L   P
Sbjct: 389  LEQVCISAPSSNKPLIKDLSLKICEGQSLLITGNTGTGKTSLLRILGGLWASP 441



 Score = 31.6 bits (70), Expect(2) = 0.0
 Identities = 13/15 (86%), Positives = 14/15 (93%)
 Frame = +1

Query: 1441 LQMPTDFGPHGVLFL 1485
            +QM TDFGPHGVLFL
Sbjct: 445  VQMLTDFGPHGVLFL 459


>ref|XP_003355337.1| PREDICTED: ATP-binding cassette sub-family D member 3-like [Sus
            scrofa].
          Length = 653

 Score =  120 bits (302), Expect = 2e-27
 Identities = 98/396 (24%), Positives = 178/396 (44%), Gaps = 27/396 (6%)
 Frame = +2

Query: 311  GVLGSKDLSGFKTLTFLAVTLIILNSMLKSFNQFISSLLYVSWRKDLTEHLHHLYFRGRV 490
            G++G +    FK   F  +  + L S++ +F +F  + L + +R  LT++L+  Y +   
Sbjct: 113  GIIG-RSRKDFKKYLFNFIAAMPLISLVNNFLKFGLNELKLCFRIRLTKYLYEEYLQAFT 171

Query: 491  YYTLNVLRDDVDNPDQRISQDVERFCRQLSSMVSKLIISPFTLVYYTYQCFQSTGWLGPV 670
            YY +  L + + NPDQ ++QDVE+FC  +  + S L      +V Y ++   + G  GP 
Sbjct: 172  YYKMGNLDNRIANPDQLLTQDVEKFCNSVVDLYSNLSKPFLDIVLYIFKLTSAIGAQGPA 231

Query: 671  SIFGYFIVGTMVNKMLMGPIVVKLVQQEKLEGDFRFKHMQIRVNAEPAAFFRAGH----- 835
            S+  Y +V  +    L  PI    + ++K EG++R+ + ++  N+E  AF+         
Sbjct: 232  SMMAYLLVSGLFLTRLRRPIGKMTITEQKYEGEYRYVNSRLITNSEEIAFYSGNKREKQT 291

Query: 836  --------VEHVXXXXXXXXXXXXXXELMSKELWLYIGVNTFDYLGSILSYVVIAIPIFS 991
                    VEH+               +++K            Y  +++ Y+V+     S
Sbjct: 292  IHAVFRKLVEHLHNFILFRFSMGFIDNIIAK------------YFATVVGYLVV-----S 334

Query: 992  GVYGDLS-PTELSTLVS-------KNAFVCMYLISCFTRLIDLSTPLSDVASYTHRIGEL 1147
            G + DLS P  L +  S       ++  + + +     R++     ++ +A +T RI EL
Sbjct: 335  GPFLDLSHPRHLKSSHSELLEDYYQSGRMLLRMSQALGRIVLAGREMTRLAGFTARITEL 394

Query: 1148 RETLLDLALKSQEGEIQDESTWDLARAPGWPAVEPTG------TAFLLEQVCISAPSSNK 1309
             + L DL     E  +  +    +  A G P +   G           + V ++ P+ + 
Sbjct: 395  MQVLKDLNHGKYERTMVSQQEKGIEGAQGIPLIPGAGEIINADNIIKFDHVPLATPNGD- 453

Query: 1310 PLIQDLNLKICQGQNLLITGNTCTGKTSLLPILGSL 1417
             LI+DLN ++  G N+LI G    GK+SL  +LG L
Sbjct: 454  ILIRDLNFEVRSGANVLICGPNGCGKSSLFRVLGEL 489


>ref|XP_003360824.1| PREDICTED: ATP-binding cassette sub-family D member 3-like, partial
            [Sus scrofa].
          Length = 473

 Score = 99.4 bits (246), Expect = 5e-21
 Identities = 85/366 (23%), Positives = 162/366 (44%), Gaps = 24/366 (6%)
 Frame = +2

Query: 311  GVLGSKDLSGFKTLTFLAVTLIILNSMLKSFNQFISSLLYVSWRKDLTEHLHHLYFRGRV 490
            G++G +    FK   F  +  + L S++ +F +F  + L + +R  LT++L+  Y +   
Sbjct: 127  GIIG-RSRKDFKKYLFNFIAAMPLISLVNNFLKFGLNELKLCFRIRLTKYLYEEYLQAFT 185

Query: 491  YYTLNVLRDDVDNPDQRISQDVERFCRQLSSMVSKLIISPFTLVYYTYQCFQSTGWLGPV 670
            YY +  L + + NPDQ ++QDVE+FC  +  + S L      +V Y ++   + G  GP 
Sbjct: 186  YYKMGNLDNRIANPDQLLTQDVEKFCNSVVDLYSNLSKPFLDIVLYIFKLTSAIGAQGPA 245

Query: 671  SIFGYFIVGTMVNKMLMGPIVVKLVQQEKLEGDFRFKHMQIRVNAEPAAFFRAGH----- 835
            S+  Y +V  +    L  PI    + ++K EG++R+ + ++  N+E  AF+         
Sbjct: 246  SMMAYLLVSGLFLTRLRRPIGKMTITEQKYEGEYRYVNSRLITNSEEIAFYSGNKREKQT 305

Query: 836  --------VEHVXXXXXXXXXXXXXXELMSKELWLYIGVNTFDYLGSILSYVVIAIPIFS 991
                    VEH+               +++K            Y  +++ Y+V+     S
Sbjct: 306  IHAVFRKLVEHLHNFILFRFSMGFIDNIIAK------------YFATVVGYLVV-----S 348

Query: 992  GVYGDLS-PTELSTLVS-------KNAFVCMYLISCFTRLIDLSTPLSDVASYTHRIGEL 1147
            G + DLS P  L +  S       ++  + + +     R++     ++ +A +T RI EL
Sbjct: 349  GPFLDLSHPRHLKSSHSELLEDYYQSGRMLLRMSQALGRIVLAGREMTRLAGFTARITEL 408

Query: 1148 RETLLDLALKSQEGEI---QDESTWDLARAPGWPAVEPTGTAFLLEQVCISAPSSNKPLI 1318
             + L DL     E  +   Q++    +   PG   +         + V ++ P+ +  LI
Sbjct: 409  MQVLKDLNHGKYERTMVSQQEKGAQGIPLIPGAGEIINADNIIKFDHVPLATPNGD-ILI 467

Query: 1319 QDLNLK 1336
            +DLN +
Sbjct: 468  RDLNFE 473


>ref|XP_003126652.1| PREDICTED: ATP-binding cassette sub-family D member 2 [Sus scrofa].
          Length = 739

 Score = 92.8 bits (229), Expect = 4e-19
 Identities = 109/457 (23%), Positives = 191/457 (41%), Gaps = 40/457 (8%)
 Frame = +2

Query: 191  KVLFPAWSSQNALMFLTLVCVALLEQ--LVIYRVGLIPSQYFGVLGSKDLSGFKTLT--- 355
            K+LFP   +     +L L  VAL+ +  L IY  GL       ++  K  +    L    
Sbjct: 92   KILFPKLVTTET-GWLCLHSVALISRTFLSIYVAGLDGKIVKSIVEKKPRTFIIKLIKWL 150

Query: 356  FLAVTLIILNSMLKSFNQFISSLLYVSWRKDLTEHLHHLYFRGRVYYTLNVLRDDVDNPD 535
             +A+    +NS ++    ++   L +++R  L +H +  YF  + YY +  +   + NPD
Sbjct: 151  MIAIPATFVNSAIR----YLEGKLALAFRTRLVDHAYETYFTNQTYYKVINMDGRLANPD 206

Query: 536  QRISQDVERFCRQLSSMVSKLIISPFTLVYYTYQCFQS-----TGWLGPVSIFGYFIVGT 700
            Q +++D+  F + ++ + S L      ++  +Y   Q+         GP  + G  +  T
Sbjct: 207  QSLTEDIMMFSQSVAHLYSNLTKPILDVILTSYTLIQTATSRGASPTGPTLLAGLVVYAT 266

Query: 701  MVNKMLMGPIVVKLVQQE-KLEGDFRFKHMQIRVNAEPAAFFRAGHVEHVXXXXXXXXXX 877
                    P   KLV +E   +G  R+ H +I  N E  AF+R   VE            
Sbjct: 267  AKVLKACSPKFGKLVAEEAHRKGYLRYVHSRIIANVEEIAFYRGHKVEMKQLQKSYKALA 326

Query: 878  XXXXELMSKELWLYIGVNTF--DYLGSILSYVVIAIPIFSGV-YGDLSPTELSTLVSK-- 1042
                 ++SK LW YI +  F   Y+ S    +++A+PI +   + D    +   +VS+  
Sbjct: 327  DQMNLILSKRLW-YIMIEQFLMKYVWSCSGLIMVAVPIITATGFADGEDGQKQAMVSERT 385

Query: 1043 NAFVCMYLI-----SCFTRLIDLSTPLSDVASYTHRI-------GELRETLLDLALKSQE 1186
             AF     +         R++     ++++A YT R+        E++  +   +   QE
Sbjct: 386  EAFTTARNLLASGADAIERIMSSYKEITELAGYTARVYNMFWVFDEVKRGIYKRSAVMQE 445

Query: 1187 GEIQDESTWDLARAPGWPAVEPTGTAFLLEQ--VCISAP---SSNKPLIQDLNLKICQGQ 1351
             E    S  +    P    +E  G    ++   +C + P    + + +   LN K+ +G 
Sbjct: 446  SENHSNSGAN-RDLPLNETLEIKGKVIDVDHGIICENVPIITPTGEVVASRLNFKVEEGM 504

Query: 1352 NLLITGNTCTGKTSLLPILGSL-------LGEPTPLH 1441
            +LLITG    GK+SL  IL  L       L +P P H
Sbjct: 505  HLLITGPNGCGKSSLFRILSGLWPVYEGVLYKPPPQH 541


>ref|XP_003135521.2| PREDICTED: ATP-binding cassette sub-family D member 1 [Sus scrofa].
          Length = 732

 Score = 89.4 bits (220), Expect = 5e-18
 Identities = 94/392 (23%), Positives = 174/392 (44%), Gaps = 38/392 (9%)
 Frame = +2

Query: 356  FLAVTLIILNSMLKSFNQFISSLLYVSWRKDLTEHLHHLYFRGRVYYTLNVLRDDVDNPD 535
            F+A+    +NS ++    ++   L +++R  L  H + LYF  + YY ++ +   + NPD
Sbjct: 139  FIALPATFVNSAIR----YLEGQLALAFRSRLVAHAYSLYFSQQTYYRVSNMDGRLRNPD 194

Query: 536  QRISQDVERFCRQLSSMVSKL-------IISPFTLVYYTYQCFQSTGWLGPVSIFGYFIV 694
            Q +++DV  F   ++ + S L        ++ +TL+         T W  P +I G  + 
Sbjct: 195  QSLTEDVVAFAASVAHLYSNLTKPLLDVAVTAYTLLRAARSRGAGTAW--PSAIAGLVVF 252

Query: 695  GTMVNKMLMGPIVVKLVQQE-KLEGDFRFKHMQIRVNAEPAAFFRAGHVEHVXXXXXXXX 871
             T        P   +LV +E + +G+ R+ H ++  N+E  AF+    VE          
Sbjct: 253  LTANVLRAFSPKFGELVAEEARRKGELRYMHSRVVANSEEIAFYGGHEVELALLQHSYQD 312

Query: 872  XXXXXXELMSKELWLYIGVNTF--DYLGSILSYVVIAIPIFSGVYGDLSPTELS------ 1027
                   ++ + LW Y+ +  F   Y+ S    +++A+PI +      S +E++      
Sbjct: 313  LASQINLILLERLW-YVMLEQFLMKYVWSASGLLMVAVPIITATGYSESDSEVAKKAALE 371

Query: 1028 ----TLVSK--NAF-VCMYLIS----CFTRLIDLSTPLSDVASYTHRIGELRETLLDL-- 1168
                 LVS+   AF +   L++       R++     ++++A YT R+ E+ +   D+  
Sbjct: 372  MREEELVSERTEAFTIARNLLTAAADAIERIMSSYKEVTELAGYTARVHEMFQVFEDVQH 431

Query: 1169 ALKSQEGEIQDESTWDLARAPGWPAVEP----TGTAFLLEQ--VCISAP---SSNKPLIQ 1321
                + GE +D      A       VE      G    +E   VC + P    + + ++ 
Sbjct: 432  CRFKRPGEPEDAQAGSGAVVRSGVRVEGPLQIRGQVVDVEHGIVCENIPIITPAGEVVVA 491

Query: 1322 DLNLKICQGQNLLITGNTCTGKTSLLPILGSL 1417
             LN+++ +G +LLITG    GK+SL  ILG L
Sbjct: 492  SLNIRVEEGMHLLITGPNGCGKSSLFRILGGL 523


  Database: RefSeq49_SP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 11,343,932
  Number of sequences in database:  24,897
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 24897
Number of Hits to DB: 38,574,124
Number of extensions: 1234505
Number of successful extensions: 6007
Number of sequences better than 1.0e-05: 6
Number of HSP's gapped: 5953
Number of HSP's successfully gapped: 8
Length of query: 495
Length of database: 11,343,932
Length adjustment: 103
Effective length of query: 392
Effective length of database: 8,779,541
Effective search space: 3441580072
Effective search space used: 3441580072
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-013709
         (1487 letters)

Database: RefSeq49_MP.fasta 
           30,036 sequences; 15,617,559 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_033018.2| ATP-binding cassette sub-family D member 4 [Mus...   662   0.0  
Alignment   gi|NP_033017.2| ATP-binding cassette sub-family D member 3 [Mus...   119   6e-27
Alignment   gi|NP_036124.2| ATP-binding cassette sub-family D member 2 [Mus...    90   5e-18
Alignment   gi|NP_031461.1| ATP-binding cassette sub-family D member 1 [Mus...    89   7e-18

>ref|NP_033018.2| ATP-binding cassette sub-family D member 4 [Mus musculus].
          Length = 606

 Score =  662 bits (1708), Expect(2) = 0.0
 Identities = 329/409 (80%), Positives = 360/409 (88%)
 Frame = +2

Query: 191  KVLFPAWSSQNALMFLTLVCVALLEQLVIYRVGLIPSQYFGVLGSKDLSGFKTLTFLAVT 370
            KV FP+WSSQN LMF+TL+CV LLEQLVIY+VGLIPSQY+GVLG+KDL GFK LT LAVT
Sbjct: 29   KVFFPSWSSQNVLMFMTLLCVTLLEQLVIYQVGLIPSQYYGVLGNKDLDGFKALTLLAVT 88

Query: 371  LIILNSMLKSFNQFISSLLYVSWRKDLTEHLHHLYFRGRVYYTLNVLRDDVDNPDQRISQ 550
            LI+LNS LKSF+QF  +LLYVSWRKDLTEHLHHLYFR RVYYTLNVLRDD+DNPDQRISQ
Sbjct: 89   LIVLNSTLKSFDQFTCNLLYVSWRKDLTEHLHHLYFRARVYYTLNVLRDDIDNPDQRISQ 148

Query: 551  DVERFCRQLSSMVSKLIISPFTLVYYTYQCFQSTGWLGPVSIFGYFIVGTMVNKMLMGPI 730
            DVERFCRQLSS+ SKLIISPFTL YYTYQCFQSTGWLGPVSIFGYFIVGTMVNK LMGPI
Sbjct: 149  DVERFCRQLSSVTSKLIISPFTLTYYTYQCFQSTGWLGPVSIFGYFIVGTMVNKTLMGPI 208

Query: 731  VVKLVQQEKLEGDFRFKHMQIRVNAEPAAFFRAGHVEHVXXXXXXXXXXXXXXELMSKEL 910
            V KLVQQEKLEGDFRFKHMQIRVNAEPAAF+RAG VEH+              ELMS+EL
Sbjct: 209  VTKLVQQEKLEGDFRFKHMQIRVNAEPAAFYRAGLVEHMRTDRRLQRLLQTQRELMSREL 268

Query: 911  WLYIGVNTFDYLGSILSYVVIAIPIFSGVYGDLSPTELSTLVSKNAFVCMYLISCFTRLI 1090
            WLYIG+NTFDYLGSILSYVVIAIPIFSGVYGDLSPTELSTLVSKNAFVC+YLISCFT+LI
Sbjct: 269  WLYIGINTFDYLGSILSYVVIAIPIFSGVYGDLSPTELSTLVSKNAFVCIYLISCFTQLI 328

Query: 1091 DLSTPLSDVASYTHRIGELRETLLDLALKSQEGEIQDESTWDLARAPGWPAVEPTGTAFL 1270
            DLST LSDVA YTHRIGEL+E LLD++ KSQ+ E   ES WDL + PG P  EP+ TAFL
Sbjct: 329  DLSTTLSDVAGYTHRIGELQEALLDMSRKSQDCEALGESEWDLDKTPGCPTTEPSDTAFL 388

Query: 1271 LEQVCISAPSSNKPLIQDLNLKICQGQNLLITGNTCTGKTSLLPILGSL 1417
            L++V I APSS+KPLI+DL+LKIC+GQ+LLITGNT TGKTSLL +LG L
Sbjct: 389  LDRVSILAPSSDKPLIKDLSLKICEGQSLLITGNTGTGKTSLLRVLGGL 437



 Score = 29.6 bits (65), Expect(2) = 0.0
 Identities = 12/15 (80%), Positives = 13/15 (86%)
 Frame = +1

Query: 1441 LQMPTDFGPHGVLFL 1485
            +QM  DFGPHGVLFL
Sbjct: 445  VQMLADFGPHGVLFL 459


>ref|NP_033017.2| ATP-binding cassette sub-family D member 3 [Mus musculus].
          Length = 659

 Score =  119 bits (298), Expect = 6e-27
 Identities = 105/426 (24%), Positives = 191/426 (44%), Gaps = 31/426 (7%)
 Frame = +2

Query: 233  FLTLVCVALLEQL-----VIYRVGLIPSQYFGVLG--SKDLSGFKTLTFLAVTLIILNSM 391
            +L L+ V L+ +      +I    LI S   G++G  SKD   FK   F  +  + L S+
Sbjct: 85   YLLLIAVMLVSRTYCDVWMIQNGTLIES---GIIGRSSKD---FKRYLFNFIAAMPLISL 138

Query: 392  LKSFNQFISSLLYVSWRKDLTEHLHHLYFRGRVYYTLNVLRDDVDNPDQRISQDVERFCR 571
            + +F ++  + L + +R  LT +L+  Y +   YY +  L + + NPDQ ++QDVE+FC 
Sbjct: 139  VNNFLKYGLNELKLCFRVRLTRYLYEEYLQAFTYYKMGNLDNRIANPDQLLTQDVEKFCN 198

Query: 572  QLSSMVSKLIISPFTLVYYTYQCFQSTGWLGPVSIFGYFIVGTMVNKMLMGPIVVKLVQQ 751
             +  + S L      +V Y ++   + G  GP S+  Y +V  +    L  PI    + +
Sbjct: 199  SVVDLYSNLSKPFLDIVLYIFKLTSAIGAQGPASMMAYLLVSGLFLTRLRRPIGKMTIME 258

Query: 752  EKLEGDFRFKHMQIRVNAEPAAFFRAGH-------------VEHVXXXXXXXXXXXXXXE 892
            +K EG++R+ + ++  N+E  AF+                 VEH+               
Sbjct: 259  QKYEGEYRYVNSRLITNSEEIAFYNGNKREKQTIHSVFRKLVEHLHNFIFFRFSMGFIDS 318

Query: 893  LMSKELWLYIGVNTFDYLGSILSYVVIAIPIFSGVYG---DLSPTELSTLVSKNAFVCMY 1063
            +++K            Y+ +++ Y+V++ P     +      + +EL     ++  + + 
Sbjct: 319  IIAK------------YVATVVGYLVVSRPFLDLAHPRHLHSTHSELLEDYYQSGRMLLR 366

Query: 1064 LISCFTRLIDLSTPLSDVASYTHRIGELRETLLDL--------ALKSQEGEIQDESTWDL 1219
            +     R++     ++ +A +T RI EL + L DL         +  QE  I+      L
Sbjct: 367  MSQALGRIVLAGREMTRLAGFTARITELMQVLKDLNHGRYERTMVSQQEKGIEGAQASPL 426

Query: 1220 ARAPGWPAVEPTGTAFLLEQVCISAPSSNKPLIQDLNLKICQGQNLLITGNTCTGKTSLL 1399
               PG   +  T      + V ++ P+ +  LIQDL+ ++  G N+LI G    GK+SL 
Sbjct: 427  --VPGAGEIINTDNIIKFDHVPLATPNGD-ILIQDLSFEVRSGANVLICGPNGCGKSSLF 483

Query: 1400 PILGSL 1417
             +LG L
Sbjct: 484  RVLGEL 489


>ref|NP_036124.2| ATP-binding cassette sub-family D member 2 [Mus musculus].
          Length = 741

 Score = 89.7 bits (221), Expect = 5e-18
 Identities = 112/461 (24%), Positives = 194/461 (42%), Gaps = 44/461 (9%)
 Frame = +2

Query: 191  KVLFPAWSSQNALMFLTLVCVALLEQ--LVIYRVGLIPSQYFGVLGSKDLSGFKTLT--- 355
            K+LFP   +     +L L  VAL+ +  L IY  GL       ++  K  +    L    
Sbjct: 93   KILFPKLVTTET-GWLCLHSVALISRTFLSIYVAGLDGKIVKSIVEKKPRTFIIKLIKWL 151

Query: 356  FLAVTLIILNSMLKSFNQFISSLLYVSWRKDLTEHLHHLYFRGRVYYTLNVLRDDVDNPD 535
             +A+    +NS ++    ++   L +++R  L +H +  YF  + YY +  +   + NPD
Sbjct: 152  MIAIPATFVNSAIR----YLECKLALAFRTRLVDHAYETYFANQTYYKVINMDGRLANPD 207

Query: 536  QRISQDVERFCRQLSSMVSKL-------IISPFTLVYYTYQCFQSTGWLGPVSIFGYFIV 694
            Q +++D+  F + ++ + S L       I++ +TL+       +    +GP  + G  + 
Sbjct: 208  QSLTEDIMMFSQSVAHLYSNLTKPILDVILTSYTLIRTATS--RGASPIGPTLLAGLVVY 265

Query: 695  GTMVNKMLMGPIVVKLVQQE-KLEGDFRFKHMQIRVNAEPAAFFRAGHVEHVXXXXXXXX 871
             T        P    LV +E   +G  R+ H +I  N E  AF+R   VE          
Sbjct: 266  ATAKVLKACSPKFGSLVAEEAHRKGYLRYVHSRIIANVEEIAFYRGHKVEMKQLQKCYKA 325

Query: 872  XXXXXXELMSKELWLYIGVNTF--DYLGSILSYVVIAIPIFSG---VYGDLSPTELSTLV 1036
                   ++SK LW YI +  F   Y+ S    +++AIPI +      GDL       +V
Sbjct: 326  LAYQMNLILSKRLW-YIMIEQFLMKYVWSSCGLIMVAIPIITATGFADGDLEDGPKQAMV 384

Query: 1037 S--KNAFVCMYLI-----SCFTRLIDLSTPLSDVASYTHRI-------GELRETLLDLAL 1174
            S    AF     +         R++     ++++A YT R+        E++  +    +
Sbjct: 385  SDRTEAFTTARNLLASGADAIERIMSSYKEITELAGYTARVYNMFWVFDEVKRGIYKRTV 444

Query: 1175 KSQEGEIQDESTWDLARAPGWPAVEPTGTAFLLEQ--VCISAP---SSNKPLIQDLNLKI 1339
             +QE E   +   +L   P    +   GT   ++   +C + P    + + +   LN K+
Sbjct: 445  -TQEPENHSKRGGNL-ELPLSDTLAIKGTVIDVDHGIICENVPIITPAGEVVASRLNFKV 502

Query: 1340 CQGQNLLITGNTCTGKTSLLPILGSL-------LGEPTPLH 1441
             +G +LLITG    GK+SL  IL  L       L +P P H
Sbjct: 503  EEGMHLLITGPNGCGKSSLFRILSGLWPVYEGVLYKPPPQH 543


>ref|NP_031461.1| ATP-binding cassette sub-family D member 1 [Mus musculus].
          Length = 736

 Score = 89.4 bits (220), Expect = 7e-18
 Identities = 91/397 (22%), Positives = 168/397 (42%), Gaps = 44/397 (11%)
 Frame = +2

Query: 359  LAVTLIILNSMLKSFNQFISSLLYVSWRKDLTEHLHHLYFRGRVYYTLNVLRDDVDNPDQ 538
            +A+    +NS ++    ++   L +S+R  L  H + LYF  + YY ++ +   + NPDQ
Sbjct: 140  IALPATFINSAIR----YLEGQLALSFRSRLVAHAYGLYFSQQTYYRVSNMDGRLRNPDQ 195

Query: 539  RISQDVERFCRQLSSMVSKL-------IISPFTLVYYTYQCFQSTGWLGPVSIFGYFIVG 697
             +++DV  F   ++ + S L        ++ +TL+         T W  P +I G  +  
Sbjct: 196  SLTEDVVAFAASVAHLYSNLTKPLLDVAVTSYTLLRAARSRGAGTAW--PSAIAGLVVFL 253

Query: 698  TMVNKMLMGPIVVKLVQQE-KLEGDFRFKHMQIRVNAEPAAFFRAGHVEHVXXXXXXXXX 874
            T        P   +LV +E + +G+ R+ H ++  N+E  AF+    VE           
Sbjct: 254  TANVLRAFSPKFGELVAEEARRKGELRYMHSRVVANSEEIAFYGGHEVELALLQHSYQDL 313

Query: 875  XXXXXELMSKELWLYIGVNTF--DYLGSILSYVVIAIPIFSG---VYGDLSPTELSTLVS 1039
                  ++ + LW Y+ +  F   Y+ S    +++A+PI +       D    + + L  
Sbjct: 314  ASQINLILLERLW-YVMLEQFLMKYVWSASGLLMVAVPIITATGYAESDSEAMKKAALEM 372

Query: 1040 KNAFVCMYLISCFT--------------RLIDLSTPLSDVASYTHRIGELRETLLDLALK 1177
            K   +       FT              R++     ++++A YT R+ E+ +   D+   
Sbjct: 373  KEEELVSERTEAFTIARNLLTAAADATERIMSSYKEVTELAGYTARVYEMFQVFEDVK-- 430

Query: 1178 SQEGEIQDESTWDLARAPGWPAV------------EPTGTAFLLEQ--VCISAP---SSN 1306
                  + + T DL  A   P V            +  G    +EQ  +C + P    + 
Sbjct: 431  ----HCRFKRTGDLEEAQAGPGVMVQSGVHVEGPLKIQGQVVDVEQGIICENIPIITPTG 486

Query: 1307 KPLIQDLNLKICQGQNLLITGNTCTGKTSLLPILGSL 1417
            + ++  LN+++ +G +LLITG    GK+SL  ILG L
Sbjct: 487  EVVVASLNIRVEEGMHLLITGPNGCGKSSLFRILGGL 523


  Database: RefSeq49_MP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 15,617,559
  Number of sequences in database:  30,036
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 30036
Number of Hits to DB: 50,963,589
Number of extensions: 1521591
Number of successful extensions: 6745
Number of sequences better than 1.0e-05: 4
Number of HSP's gapped: 6683
Number of HSP's successfully gapped: 5
Length of query: 495
Length of database: 15,617,559
Length adjustment: 105
Effective length of query: 390
Effective length of database: 12,463,779
Effective search space: 4860873810
Effective search space used: 4860873810
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-013709
         (1487 letters)

Database: RefSeq49_HP.fasta 
           32,964 sequences; 18,297,164 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_005041.1| ATP-binding cassette sub-family D member 4 [Hom...   673   0.0  
Alignment   gi|NP_002849.1| ATP-binding cassette sub-family D member 3 isof...   117   4e-26
Alignment   gi|NP_005155.1| ATP-binding cassette sub-family D member 2 [Hom...    91   2e-18
Alignment   gi|NP_000024.2| ATP-binding cassette sub-family D member 1 [Hom...    90   5e-18
Alignment   gi|NP_001116146.1| ATP-binding cassette sub-family D member 3 i...    55   1e-07

>ref|NP_005041.1| ATP-binding cassette sub-family D member 4 [Homo sapiens].
          Length = 606

 Score =  673 bits (1737), Expect(2) = 0.0
 Identities = 335/409 (81%), Positives = 364/409 (88%)
 Frame = +2

Query: 191  KVLFPAWSSQNALMFLTLVCVALLEQLVIYRVGLIPSQYFGVLGSKDLSGFKTLTFLAVT 370
            KVLFP+WSSQNALMFLTL+C+ LLEQ VIY+VGLIPSQY+GVLG+KDL GFKTLTFLAV 
Sbjct: 29   KVLFPSWSSQNALMFLTLLCLTLLEQFVIYQVGLIPSQYYGVLGNKDLEGFKTLTFLAVM 88

Query: 371  LIILNSMLKSFNQFISSLLYVSWRKDLTEHLHHLYFRGRVYYTLNVLRDDVDNPDQRISQ 550
            LI+LNS LKSF+QF  +LLYVSWRKDLTEHLH LYFRGR YYTLNVLRDD+DNPDQRISQ
Sbjct: 89   LIVLNSTLKSFDQFTCNLLYVSWRKDLTEHLHRLYFRGRAYYTLNVLRDDIDNPDQRISQ 148

Query: 551  DVERFCRQLSSMVSKLIISPFTLVYYTYQCFQSTGWLGPVSIFGYFIVGTMVNKMLMGPI 730
            DVERFCRQLSSM SKLIISPFTLVYYTYQCFQSTGWLGPVSIFGYFI+GT+VNK LMGPI
Sbjct: 149  DVERFCRQLSSMASKLIISPFTLVYYTYQCFQSTGWLGPVSIFGYFILGTVVNKTLMGPI 208

Query: 731  VVKLVQQEKLEGDFRFKHMQIRVNAEPAAFFRAGHVEHVXXXXXXXXXXXXXXELMSKEL 910
            V+KLV QEKLEGDFRFKHMQIRVNAEPAAF+RAGHVEH+              ELMSKEL
Sbjct: 209  VMKLVHQEKLEGDFRFKHMQIRVNAEPAAFYRAGHVEHMRTDRRLQRLLQTQRELMSKEL 268

Query: 911  WLYIGVNTFDYLGSILSYVVIAIPIFSGVYGDLSPTELSTLVSKNAFVCMYLISCFTRLI 1090
            WLYIG+NTFDYLGSILSYVVIAIPIFSGVYGDLSP ELSTLVSKNAFVC+YLISCFT+LI
Sbjct: 269  WLYIGINTFDYLGSILSYVVIAIPIFSGVYGDLSPAELSTLVSKNAFVCIYLISCFTQLI 328

Query: 1091 DLSTPLSDVASYTHRIGELRETLLDLALKSQEGEIQDESTWDLARAPGWPAVEPTGTAFL 1270
            DLST LSDVA YTHRIG+LRETLLD++LKSQ+ EI  ES W L   PGWPA EP  TAFL
Sbjct: 329  DLSTTLSDVAGYTHRIGQLRETLLDMSLKSQDCEILGESEWGLDTPPGWPAAEPADTAFL 388

Query: 1271 LEQVCISAPSSNKPLIQDLNLKICQGQNLLITGNTCTGKTSLLPILGSL 1417
            LE+V ISAPSS+KPLI+DL+LKI +GQ+LLITGNT TGKTSLL +LG L
Sbjct: 389  LERVSISAPSSDKPLIKDLSLKISEGQSLLITGNTGTGKTSLLRVLGGL 437



 Score = 31.6 bits (70), Expect(2) = 0.0
 Identities = 13/15 (86%), Positives = 14/15 (93%)
 Frame = +1

Query: 1441 LQMPTDFGPHGVLFL 1485
            +QM TDFGPHGVLFL
Sbjct: 445  VQMLTDFGPHGVLFL 459


>ref|NP_002849.1| ATP-binding cassette sub-family D member 3 isoform a [Homo sapiens].
          Length = 659

 Score =  117 bits (292), Expect = 4e-26
 Identities = 102/427 (23%), Positives = 189/427 (44%), Gaps = 32/427 (7%)
 Frame = +2

Query: 233  FLTLVCVALLEQL-----VIYRVGLIPSQYFGVLGSKDLSGFKTLTFLAVTLIILNSMLK 397
            +L L+ V L+ +      +I    LI S   G++G +    FK      +  + L S++ 
Sbjct: 85   YLVLIAVMLVSRTYCDVWMIQNGTLIES---GIIG-RSRKDFKRYLLNFIAAMPLISLVN 140

Query: 398  SFNQFISSLLYVSWRKDLTEHLHHLYFRGRVYYTLNVLRDDVDNPDQRISQDVERFCRQL 577
            +F ++  + L + +R  LT++L+  Y +   YY +  L + + NPDQ ++QDVE+FC  +
Sbjct: 141  NFLKYGLNELKLCFRVRLTKYLYEEYLQAFTYYKMGNLDNRIANPDQLLTQDVEKFCNSV 200

Query: 578  SSMVSKLIISPFTLVYYTYQCFQSTGWLGPVSIFGYFIVGTMVNKMLMGPIVVKLVQQEK 757
              + S L      +V Y ++   + G  GP S+  Y +V  +    L  PI    + ++K
Sbjct: 201  VDLYSNLSKPFLDIVLYIFKLTSAIGAQGPASMMAYLVVSGLFLTRLRRPIGKMTITEQK 260

Query: 758  LEGDFRFKHMQIRVNAEPAAFFRAGH-------------VEHVXXXXXXXXXXXXXXELM 898
             EG++R+ + ++  N+E  AF+                 VEH+               ++
Sbjct: 261  YEGEYRYVNSRLITNSEEIAFYNGNKREKQTVHSVFRKLVEHLHNFILFRFSMGFIDSII 320

Query: 899  SKELWLYIGVNTFDYLGSILSYVVIAIPIFSGVYGDLS-PTELSTLVS-------KNAFV 1054
            +K            YL +++ Y+V++ P       DLS P  L +  S       ++  +
Sbjct: 321  AK------------YLATVVGYLVVSRPFL-----DLSHPRHLKSTHSELLEDYYQSGRM 363

Query: 1055 CMYLISCFTRLIDLSTPLSDVASYTHRIGELRETLLDLALKSQEGEIQDESTWDLARAPG 1234
             + +     R++     ++ +A +T RI EL + L DL     E  +  +    +     
Sbjct: 364  LLRMSQALGRIVLAGREMTRLAGFTARITELMQVLKDLNHGKYERTMVSQQEKGIEGVQV 423

Query: 1235 WPAVEPTGTAFL------LEQVCISAPSSNKPLIQDLNLKICQGQNLLITGNTCTGKTSL 1396
             P +   G   +       + V ++ P+ +  LI+DLN ++  G N+LI G    GK+SL
Sbjct: 424  IPLIPGAGEIIIADNIIKFDHVPLATPNGD-VLIRDLNFEVRSGANVLICGPNGCGKSSL 482

Query: 1397 LPILGSL 1417
              +LG L
Sbjct: 483  FRVLGEL 489


>ref|NP_005155.1| ATP-binding cassette sub-family D member 2 [Homo sapiens].
          Length = 740

 Score = 91.3 bits (225), Expect = 2e-18
 Identities = 114/459 (24%), Positives = 189/459 (41%), Gaps = 42/459 (9%)
 Frame = +2

Query: 191  KVLFPAWSSQNALMFLTLVCVALLEQ--LVIYRVGLIPSQYFGVLGSKDLSGFKTLT--- 355
            K+LFP   +     +L L  VAL+ +  L IY  GL       ++  K  +    L    
Sbjct: 93   KILFPKLVTTET-GWLCLHSVALISRTFLSIYVAGLDGKIVKSIVEKKPRTFIIKLIKWL 151

Query: 356  FLAVTLIILNSMLKSFNQFISSLLYVSWRKDLTEHLHHLYFRGRVYYTLNVLRDDVDNPD 535
             +A+    +NS ++    ++   L +++R  L +H +  YF  + YY +  +   + NPD
Sbjct: 152  MIAIPATFVNSAIR----YLECKLALAFRTRLVDHAYETYFTNQTYYKVINMDGRLANPD 207

Query: 536  QRISQDVERFCRQLSSMVSKL---IISPFTLVYYTYQCFQSTGW--LGPVSIFGYFIVGT 700
            Q +++D+  F + ++ + S L   I+      Y   Q   S G   +GP  + G  +  T
Sbjct: 208  QSLTEDIMMFSQSVAHLYSNLTKPILDVMLTSYTLIQTATSRGASPIGPTLLAGLVVYAT 267

Query: 701  MVNKMLMGPIVVKLVQQE-KLEGDFRFKHMQIRVNAEPAAFFRAGHVEHVXXXXXXXXXX 877
                    P   KLV +E   +G  R+ H +I  N E  AF+R   VE            
Sbjct: 268  AKVLKACSPKFGKLVAEEAHRKGYLRYVHSRIIANVEEIAFYRGHKVEMKQLQKSYKALA 327

Query: 878  XXXXELMSKELWLYIGVNTF--DYLGSILSYVVIAIPIFSGV-YGDLSPTELSTLVSK-- 1042
                 ++SK LW YI +  F   Y+ S    +++AIPI +   + D    +   +VS+  
Sbjct: 328  DQMNLILSKRLW-YIMIEQFLMKYVWSSSGLIMVAIPIITATGFADGEDGQKQVMVSERT 386

Query: 1043 NAFVCMYLI-----SCFTRLIDLSTPLSDVASYTHRI-------GELRETLLDLALKSQE 1186
             AF     +         R++     ++++A YT R+        E++  +       QE
Sbjct: 387  EAFTTARNLLASGADAIERIMSSYKEVTELAGYTARVYNMFWVFDEVKRGIYKRTAVIQE 446

Query: 1187 GEIQDES-------TWDLARAPGWPAVEPTGTAFLLEQVCISAPSSNKPLIQDLNLKICQ 1345
             E   ++         D     G   V       + E V I  P + + +   LN K+ +
Sbjct: 447  SESHSKNGAKVELPLSDTLAIKG--KVIDVDHGIICENVPIITP-AGEVVASRLNFKVEE 503

Query: 1346 GQNLLITGNTCTGKTSLLPILGSL-------LGEPTPLH 1441
            G +LLITG    GK+SL  IL  L       L +P P H
Sbjct: 504  GMHLLITGPNGCGKSSLFRILSGLWPVYEGVLYKPPPQH 542


>ref|NP_000024.2| ATP-binding cassette sub-family D member 1 [Homo sapiens].
          Length = 745

 Score = 90.1 bits (222), Expect = 5e-18
 Identities = 92/398 (23%), Positives = 170/398 (42%), Gaps = 38/398 (9%)
 Frame = +2

Query: 338  GFKTLTFLAVTLIILNSMLKSFNQFISSLLYVSWRKDLTEHLHHLYFRGRVYYTLNVLRD 517
            G++ L +L + L    + + S  +++   L +S+R  L  H + LYF  + YY ++ +  
Sbjct: 131  GWQLLQWLLIALPA--TFVNSAIRYLEGQLALSFRSRLVAHAYRLYFSQQTYYRVSNMDG 188

Query: 518  DVDNPDQRISQDVERFCRQLSSMVSKL-------IISPFTLVYYTYQCFQSTGWLGPVSI 676
             + NPDQ +++DV  F   ++ + S L        ++ +TL+         T W  P +I
Sbjct: 189  RLRNPDQSLTEDVVAFAASVAHLYSNLTKPLLDVAVTSYTLLRAARSRGAGTAW--PSAI 246

Query: 677  FGYFIVGTMVNKMLMGPIVVKLVQQE-KLEGDFRFKHMQIRVNAEPAAFFRAGHVEHVXX 853
             G  +  T        P   +LV +E + +G+ R+ H ++  N+E  AF+    VE    
Sbjct: 247  AGLVVFLTANVLRAFSPKFGELVAEEARRKGELRYMHSRVVANSEEIAFYGGHEVELALL 306

Query: 854  XXXXXXXXXXXXELMSKELWLYIGVNTF--DYLGSILSYVVIAIPIFSGV---YGDLSPT 1018
                         ++ + LW Y+ +  F   Y+ S    +++A+PI +       D    
Sbjct: 307  QRSYQDLASQINLILLERLW-YVMLEQFLMKYVWSASGLLMVAVPIITATGYSESDAEAV 365

Query: 1019 ELSTLVSKNAFVCMYLISCFT--------------RLIDLSTPLSDVASYTHRIGELRET 1156
            + + L  K   +       FT              R++     ++++A YT R+ E+ + 
Sbjct: 366  KKAALEKKEEELVSERTEAFTIARNLLTAAADAIERIMSSYKEVTELAGYTARVHEMFQV 425

Query: 1157 LLDL--ALKSQEGEIQDESTWDLARAPGWPAVEP----TGTAFLLEQ--VCISAP---SS 1303
              D+      +  E++D              VE      G    +EQ  +C + P    S
Sbjct: 426  FEDVQRCHFKRPRELEDAQAGSGTIGRSGVRVEGPLKIRGQVVDVEQGIICENIPIVTPS 485

Query: 1304 NKPLIQDLNLKICQGQNLLITGNTCTGKTSLLPILGSL 1417
             + ++  LN+++ +G +LLITG    GK+SL  ILG L
Sbjct: 486  GEVVVASLNIRVEEGMHLLITGPNGCGKSSLFRILGGL 523


>ref|NP_001116146.1| ATP-binding cassette sub-family D member 3 isoform b [Homo
           sapiens].
          Length = 236

 Score = 55.5 bits (132), Expect = 1e-07
 Identities = 39/146 (26%), Positives = 73/146 (50%), Gaps = 5/146 (3%)
 Frame = +2

Query: 233 FLTLVCVALLEQL-----VIYRVGLIPSQYFGVLGSKDLSGFKTLTFLAVTLIILNSMLK 397
           +L L+ V L+ +      +I    LI S   G++G +    FK      +  + L S++ 
Sbjct: 85  YLVLIAVMLVSRTYCDVWMIQNGTLIES---GIIG-RSRKDFKRYLLNFIAAMPLISLVN 140

Query: 398 SFNQFISSLLYVSWRKDLTEHLHHLYFRGRVYYTLNVLRDDVDNPDQRISQDVERFCRQL 577
           +F ++  + L + +R  LT++L+  Y +   YY +  L + + NPDQ ++QDVE+FC  +
Sbjct: 141 NFLKYGLNELKLCFRVRLTKYLYEEYLQAFTYYKMGNLDNRIANPDQLLTQDVEKFCNSV 200

Query: 578 SSMVSKLIISPFTLVYYTYQCFQSTG 655
             + S L      +V Y ++   + G
Sbjct: 201 VDLYSNLSKPFLDIVLYIFKLTSAIG 226


  Database: RefSeq49_HP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 18,297,164
  Number of sequences in database:  32,964
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 32964
Number of Hits to DB: 60,418,310
Number of extensions: 1847051
Number of successful extensions: 8726
Number of sequences better than 1.0e-05: 5
Number of HSP's gapped: 8643
Number of HSP's successfully gapped: 6
Length of query: 495
Length of database: 18,297,164
Length adjustment: 107
Effective length of query: 388
Effective length of database: 14,770,016
Effective search space: 5730766208
Effective search space used: 5730766208
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)

BLASTN 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-013709
         (1487 letters)

Database: Sscrofa_10.2.fasta 
           4582 sequences; 2,808,509,378 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Sscrofa_Chr07                                                         331   6e-88

>Sscrofa_Chr07 
||          Length = 134764511

 Score =  331 bits (167), Expect = 6e-88
 Identities = 201/211 (95%), Gaps = 1/211 (0%)
 Strand = Plus / Plus

                                                                             
Query: 1223      agggccccgggatggccagcagtagagccaacaggtacagcttttctcctcgagcaggtg 1282
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 103244293 agggccccgggatggccagcagtagagccaacaggtacagcttttctcctcgagcaggtg 103244352

                                                                             
Query: 1283      tgcatctccgccccctcctctaacaaacccttaatccaggatctgaacctgaaaatctgc 1342
                 |||||||||||||||||||||||||||||||||||| ||||||||| |||||| ||||||
Sbjct: 103244353 tgcatctccgccccctcctctaacaaacccttaatcaaggatctgagcctgaagatctgc 103244412

                                                                             
Query: 1343      caggggcaaaacctgctcatcacgggcaacacatgcactggcaagacctccttgctcccg 1402
                  ||||||| | |||||||||||||||||||||| |||||||||||||||||||||||| |
Sbjct: 103244413 gaggggcagagcctgctcatcacgggcaacacaggcactggcaagacctccttgctccgg 103244472

                                                
Query: 1403      attctgggaagcctcctgggcgagcccactc 1433
                 ||||||||| |||| ||||||||||||||||
Sbjct: 103244473 attctgggaggcct-ctgggcgagcccactc 103244502



 Score =  331 bits (167), Expect = 6e-88
 Identities = 201/211 (95%), Gaps = 1/211 (0%)
 Strand = Plus / Minus

                                                                             
Query: 1223      agggccccgggatggccagcagtagagccaacaggtacagcttttctcctcgagcaggtg 1282
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 103416188 agggccccgggatggccagcagtagagccaacaggtacagcttttctcctcgagcaggtg 103416129

                                                                             
Query: 1283      tgcatctccgccccctcctctaacaaacccttaatccaggatctgaacctgaaaatctgc 1342
                 |||||||||||||||||||||||||||||||||||| ||||||||| |||||| ||||||
Sbjct: 103416128 tgcatctccgccccctcctctaacaaacccttaatcaaggatctgagcctgaagatctgc 103416069

                                                                             
Query: 1343      caggggcaaaacctgctcatcacgggcaacacatgcactggcaagacctccttgctcccg 1402
                  ||||||| | |||||||||||||||||||||| |||||||||||||||||||||||| |
Sbjct: 103416068 gaggggcagagcctgctcatcacgggcaacacaggcactggcaagacctccttgctccgg 103416009

                                                
Query: 1403      attctgggaagcctcctgggcgagcccactc 1433
                 ||||||||| |||| ||||||||||||||||
Sbjct: 103416008 attctgggaggcct-ctgggcgagcccactc 103415979



 Score =  281 bits (142), Expect = 5e-73
 Identities = 142/142 (100%)
 Strand = Plus / Plus

                                                                             
Query: 391       gctgaagagtttcaaccagttcatcagcagcctgctgtacgtgagctggaggaaggacct 450
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 103236917 gctgaagagtttcaaccagttcatcagcagcctgctgtacgtgagctggaggaaggacct 103236976

                                                                             
Query: 451       caccgagcaccttcaccacctctacttccggggccgcgtgtactacaccctcaacgtgct 510
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 103236977 caccgagcaccttcaccacctctacttccggggccgcgtgtactacaccctcaacgtgct 103237036

                                       
Query: 511       gcgggatgacgtcgacaacccg 532
                 ||||||||||||||||||||||
Sbjct: 103237037 gcgggatgacgtcgacaacccg 103237058



 Score =  281 bits (142), Expect = 5e-73
 Identities = 142/142 (100%)
 Strand = Plus / Minus

                                                                             
Query: 391       gctgaagagtttcaaccagttcatcagcagcctgctgtacgtgagctggaggaaggacct 450
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 103423565 gctgaagagtttcaaccagttcatcagcagcctgctgtacgtgagctggaggaaggacct 103423506

                                                                             
Query: 451       caccgagcaccttcaccacctctacttccggggccgcgtgtactacaccctcaacgtgct 510
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 103423505 caccgagcaccttcaccacctctacttccggggccgcgtgtactacaccctcaacgtgct 103423446

                                       
Query: 511       gcgggatgacgtcgacaacccg 532
                 ||||||||||||||||||||||
Sbjct: 103423445 gcgggatgacgtcgacaacccg 103423424



 Score =  258 bits (130), Expect = 8e-66
 Identities = 130/130 (100%)
 Strand = Plus / Plus

                                                                             
Query: 647       agcaccggctggcttgggcccgtgagcatcttcgggtatttcatcgtgggaaccatggtg 706
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 103239655 agcaccggctggcttgggcccgtgagcatcttcgggtatttcatcgtgggaaccatggtg 103239714

                                                                             
Query: 707       aacaaaatgttgatgggtcccatcgtggtgaagctggtgcagcaggagaagctggagggg 766
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 103239715 aacaaaatgttgatgggtcccatcgtggtgaagctggtgcagcaggagaagctggagggg 103239774

                           
Query: 767       gatttcaggt 776
                 ||||||||||
Sbjct: 103239775 gatttcaggt 103239784



 Score =  258 bits (130), Expect = 8e-66
 Identities = 130/130 (100%)
 Strand = Plus / Minus

                                                                             
Query: 647       agcaccggctggcttgggcccgtgagcatcttcgggtatttcatcgtgggaaccatggtg 706
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 103420827 agcaccggctggcttgggcccgtgagcatcttcgggtatttcatcgtgggaaccatggtg 103420768

                                                                             
Query: 707       aacaaaatgttgatgggtcccatcgtggtgaagctggtgcagcaggagaagctggagggg 766
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 103420767 aacaaaatgttgatgggtcccatcgtggtgaagctggtgcagcaggagaagctggagggg 103420708

                           
Query: 767       gatttcaggt 776
                 ||||||||||
Sbjct: 103420707 gatttcaggt 103420698



 Score =  256 bits (129), Expect = 3e-65
 Identities = 129/129 (100%)
 Strand = Plus / Plus

                                                                             
Query: 263       gaacaactggtgatctaccgggttggcctgatccccagtcagtactttggggtcctggga 322
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 103235639 gaacaactggtgatctaccgggttggcctgatccccagtcagtactttggggtcctggga 103235698

                                                                             
Query: 323       agcaaagacttaagtgggtttaagaccctgacattcctggctgtcacgcttatcatcctc 382
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 103235699 agcaaagacttaagtgggtttaagaccctgacattcctggctgtcacgcttatcatcctc 103235758

                          
Query: 383       aactccatg 391
                 |||||||||
Sbjct: 103235759 aactccatg 103235767



 Score =  256 bits (129), Expect = 3e-65
 Identities = 129/129 (100%)
 Strand = Plus / Minus

                                                                             
Query: 263       gaacaactggtgatctaccgggttggcctgatccccagtcagtactttggggtcctggga 322
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 103424843 gaacaactggtgatctaccgggttggcctgatccccagtcagtactttggggtcctggga 103424784

                                                                             
Query: 323       agcaaagacttaagtgggtttaagaccctgacattcctggctgtcacgcttatcatcctc 382
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 103424783 agcaaagacttaagtgggtttaagaccctgacattcctggctgtcacgcttatcatcctc 103424724

                          
Query: 383       aactccatg 391
                 |||||||||
Sbjct: 103424723 aactccatg 103424715



 Score =  242 bits (122), Expect = 5e-61
 Identities = 122/122 (100%)
 Strand = Plus / Plus

                                                                             
Query: 142       caggcccaggttagatctgcaatttctccagcggttcctgcagatacagaaggttttgtt 201
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 103235370 caggcccaggttagatctgcaatttctccagcggttcctgcagatacagaaggttttgtt 103235429

                                                                             
Query: 202       tccagcttggtcctcacagaatgctttgatgttcctgacccttgtgtgtgtggccctact 261
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 103235430 tccagcttggtcctcacagaatgctttgatgttcctgacccttgtgtgtgtggccctact 103235489

                   
Query: 262       gg 263
                 ||
Sbjct: 103235490 gg 103235491



 Score =  242 bits (122), Expect = 5e-61
 Identities = 122/122 (100%)
 Strand = Plus / Plus

                                                                             
Query: 921       tcggcgtcaacacgtttgactatctgggcagcatcctgagttacgtcgtgatcgccatcc 980
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 103242449 tcggcgtcaacacgtttgactatctgggcagcatcctgagttacgtcgtgatcgccatcc 103242508

                                                                             
Query: 981       ccatcttcagcggtgtctatggagacctgagccccacggagctcagcaccctggtcagca 1040
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 103242509 ccatcttcagcggtgtctatggagacctgagccccacggagctcagcaccctggtcagca 103242568

                   
Query: 1041      ag 1042
                 ||
Sbjct: 103242569 ag 103242570



 Score =  242 bits (122), Expect = 5e-61
 Identities = 122/122 (100%)
 Strand = Plus / Minus

                                                                             
Query: 921       tcggcgtcaacacgtttgactatctgggcagcatcctgagttacgtcgtgatcgccatcc 980
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 103418032 tcggcgtcaacacgtttgactatctgggcagcatcctgagttacgtcgtgatcgccatcc 103417973

                                                                             
Query: 981       ccatcttcagcggtgtctatggagacctgagccccacggagctcagcaccctggtcagca 1040
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 103417972 ccatcttcagcggtgtctatggagacctgagccccacggagctcagcaccctggtcagca 103417913

                   
Query: 1041      ag 1042
                 ||
Sbjct: 103417912 ag 103417911



 Score =  242 bits (122), Expect = 5e-61
 Identities = 122/122 (100%)
 Strand = Plus / Minus

                                                                             
Query: 142       caggcccaggttagatctgcaatttctccagcggttcctgcagatacagaaggttttgtt 201
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 103425112 caggcccaggttagatctgcaatttctccagcggttcctgcagatacagaaggttttgtt 103425053

                                                                             
Query: 202       tccagcttggtcctcacagaatgctttgatgttcctgacccttgtgtgtgtggccctact 261
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 103425052 tccagcttggtcctcacagaatgctttgatgttcctgacccttgtgtgtgtggccctact 103424993

                   
Query: 262       gg 263
                 ||
Sbjct: 103424992 gg 103424991



 Score =  232 bits (117), Expect = 4e-58
 Identities = 117/117 (100%)
 Strand = Plus / Plus

                                                                             
Query: 532       ggaccagcgcatcagccaggacgtggaacggttctgccggcagctgagcagcatggtcag 591
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 103239179 ggaccagcgcatcagccaggacgtggaacggttctgccggcagctgagcagcatggtcag 103239238

                                                                          
Query: 592       caagctgatcatctcccccttcaccctcgtctactacacctatcagtgcttccagag 648
                 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 103239239 caagctgatcatctcccccttcaccctcgtctactacacctatcagtgcttccagag 103239295



 Score =  232 bits (117), Expect = 4e-58
 Identities = 117/117 (100%)
 Strand = Plus / Minus

                                                                             
Query: 532       ggaccagcgcatcagccaggacgtggaacggttctgccggcagctgagcagcatggtcag 591
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 103421303 ggaccagcgcatcagccaggacgtggaacggttctgccggcagctgagcagcatggtcag 103421244

                                                                          
Query: 592       caagctgatcatctcccccttcaccctcgtctactacacctatcagtgcttccagag 648
                 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 103421243 caagctgatcatctcccccttcaccctcgtctactacacctatcagtgcttccagag 103421187



 Score =  220 bits (111), Expect = 2e-54
 Identities = 111/111 (100%)
 Strand = Plus / Plus

                                                                             
Query: 35        agccggctgttccgactccaacccgagccgaccctagagggtccggctcctgcgtgggtc 94
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 103231425 agccggctgttccgactccaacccgagccgaccctagagggtccggctcctgcgtgggtc 103231484

                                                                    
Query: 95        ggatcccaggtcatggcggtctctggtcctgcgcgcagagctggcgccagg 145
                 |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 103231485 ggatcccaggtcatggcggtctctggtcctgcgcgcagagctggcgccagg 103231535



 Score =  220 bits (111), Expect = 2e-54
 Identities = 111/111 (100%)
 Strand = Plus / Minus

                                                                             
Query: 35        agccggctgttccgactccaacccgagccgaccctagagggtccggctcctgcgtgggtc 94
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 103428206 agccggctgttccgactccaacccgagccgaccctagagggtccggctcctgcgtgggtc 103428147

                                                                    
Query: 95        ggatcccaggtcatggcggtctctggtcctgcgcgcagagctggcgccagg 145
                 |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 103428146 ggatcccaggtcatggcggtctctggtcctgcgcgcagagctggcgccagg 103428096



 Score =  188 bits (95), Expect = 6e-45
 Identities = 98/99 (98%)
 Strand = Plus / Plus

                                                                             
Query: 822       tcagagctgggcacgtggagcacgtgaggacagaccgcaggctgcagagactccttcgga 881
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 103242135 tcagagctgggcacgtggagcacgtgaggacagaccgcaggctgcagagactccttcgga 103242194

                                                        
Query: 882       cccagagggagctgatgtccaaggagctgtggctgtaca 920
                 | |||||||||||||||||||||||||||||||||||||
Sbjct: 103242195 cgcagagggagctgatgtccaaggagctgtggctgtaca 103242233



 Score =  188 bits (95), Expect = 6e-45
 Identities = 98/99 (98%)
 Strand = Plus / Minus

                                                                             
Query: 822       tcagagctgggcacgtggagcacgtgaggacagaccgcaggctgcagagactccttcgga 881
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 103418346 tcagagctgggcacgtggagcacgtgaggacagaccgcaggctgcagagactccttcgga 103418287

                                                        
Query: 882       cccagagggagctgatgtccaaggagctgtggctgtaca 920
                 | |||||||||||||||||||||||||||||||||||||
Sbjct: 103418286 cgcagagggagctgatgtccaaggagctgtggctgtaca 103418248



 Score =  176 bits (89), Expect = 2e-41
 Identities = 92/93 (98%)
 Strand = Plus / Plus

                                                                             
Query: 1133      aggatcggggagcttcgggagaccctgctggacttggccctgaagtcgcaggagggggag 1192
                 |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 103242922 aggatcggagagcttcgggagaccctgctggacttggccctgaagtcgcaggagggggag 103242981

                                                  
Query: 1193      atccaggacgagagcacatgggacttggccagg 1225
                 |||||||||||||||||||||||||||||||||
Sbjct: 103242982 atccaggacgagagcacatgggacttggccagg 103243014



 Score =  176 bits (89), Expect = 2e-41
 Identities = 92/93 (98%)
 Strand = Plus / Minus

                                                                             
Query: 1133      aggatcggggagcttcgggagaccctgctggacttggccctgaagtcgcaggagggggag 1192
                 |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 103417559 aggatcggagagcttcgggagaccctgctggacttggccctgaagtcgcaggagggggag 103417500

                                                  
Query: 1193      atccaggacgagagcacatgggacttggccagg 1225
                 |||||||||||||||||||||||||||||||||
Sbjct: 103417499 atccaggacgagagcacatgggacttggccagg 103417467



 Score =  157 bits (79), Expect = 2e-35
 Identities = 91/95 (95%)
 Strand = Plus / Plus

                                                                             
Query: 1041      agaacgccttcgtatgcatgtacctcatcagctgcttcacccggctcattgacctgtcca 1100
                 ||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 103242673 agaacaccttcgtatgcatgtacctcatcagctgcttcacccggctcatcgacctgtcca 103242732

                                                    
Query: 1101      cgccgctctcggatgtggccagttacacacacagg 1135
                 | |||||||||||||||||| ||||||||||||||
Sbjct: 103242733 ccccgctctcggatgtggccggttacacacacagg 103242767



 Score =  157 bits (79), Expect = 2e-35
 Identities = 91/95 (95%)
 Strand = Plus / Minus

                                                                             
Query: 1041      agaacgccttcgtatgcatgtacctcatcagctgcttcacccggctcattgacctgtcca 1100
                 ||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 103417808 agaacaccttcgtatgcatgtacctcatcagctgcttcacccggctcatcgacctgtcca 103417749

                                                    
Query: 1101      cgccgctctcggatgtggccagttacacacacagg 1135
                 | |||||||||||||||||| ||||||||||||||
Sbjct: 103417748 ccccgctctcggatgtggccggttacacacacagg 103417714



 Score =  107 bits (54), Expect = 2e-20
 Identities = 54/54 (100%)
 Strand = Plus / Plus

                                                                       
Query: 772       caggttcaagcacatgcagatccgggtgaatgctgagcctgctgcttttttcag 825
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 103240550 caggttcaagcacatgcagatccgggtgaatgctgagcctgctgcttttttcag 103240603



 Score =  107 bits (54), Expect = 2e-20
 Identities = 54/54 (100%)
 Strand = Plus / Minus

                                                                       
Query: 772       caggttcaagcacatgcagatccgggtgaatgctgagcctgctgcttttttcag 825
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 103419932 caggttcaagcacatgcagatccgggtgaatgctgagcctgctgcttttttcag 103419879



 Score = 75.8 bits (38), Expect = 6e-11
 Identities = 44/46 (95%)
 Strand = Plus / Plus

                                                               
Query: 1442      tgcagatgcctacagactttggaccccatggggtgctattcctgcc 1487
                 |||||||||  |||||||||||||||||||||||||||||||||||
Sbjct: 103244677 tgcagatgctaacagactttggaccccatggggtgctattcctgcc 103244722



 Score = 75.8 bits (38), Expect = 6e-11
 Identities = 44/46 (95%)
 Strand = Plus / Minus

                                                               
Query: 1442      tgcagatgcctacagactttggaccccatggggtgctattcctgcc 1487
                 |||||||||  |||||||||||||||||||||||||||||||||||
Sbjct: 103415804 tgcagatgctaacagactttggaccccatggggtgctattcctgcc 103415759


  Database: Sscrofa_10.2.fasta
    Posted date:  Nov 16, 2011 10:34 AM
  Number of letters in database: 2,808,509,378
  Number of sequences in database:  4582
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4582
Number of Hits to DB: 39,216,587
Number of extensions: 216
Number of successful extensions: 216
Number of sequences better than 1.0e-05: 1
Number of HSP's gapped: 216
Number of HSP's successfully gapped: 26
Length of query: 1487
Length of database: 2,808,509,378
Length adjustment: 21
Effective length of query: 1466
Effective length of database: 2,808,413,156
Effective search space: 4117133686696
Effective search space used: 4117133686696
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 18 (36.2 bits)
S2: 30 (60.0 bits)