Search to RefSeqCP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-013715
(1378 letters)
Database: RefSeq49_CP.fasta
33,336 sequences; 18,874,504 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_544060.2| PREDICTED: similar to phospholysine phosphohist... 370 e-102
Alignment gi|XP_537270.1| PREDICTED: similar to haloacid dehalogenase-lik... 137 3e-32
>ref|XP_544060.2| PREDICTED: similar to phospholysine phosphohistidine inorganic
pyrophosphate phosphatase [Canis familiaris].
Length = 270
Score = 370 bits (949), Expect = e-102
Identities = 193/267 (72%), Positives = 202/267 (75%)
Frame = +2
Query: 80 WGERLAGVRGVLLDISGVLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFCTNESQKSXXX 259
WGERLAGVRGVLLDISGVL FCTNESQKS
Sbjct: 4 WGERLAGVRGVLLDISGVLYDGGEDGGSPIPGSVEAVARLKRSRLKVRFCTNESQKSRGN 63
Query: 260 XXXXXXXXXFDISEGEVTAPAPATCLILKERGLRPHLLVHDGVRSEFGQIDTSNPNCVVI 439
FDISEGEVTAPAPA LILKERGLRPHLLVHDGVRSEF Q D SNPNCVVI
Sbjct: 64 LVGLLRRLGFDISEGEVTAPAPAASLILKERGLRPHLLVHDGVRSEFDQNDMSNPNCVVI 123
Query: 440 ADAGEDFSYQNMNKAFQVLMELEKPILFSLGKGRYYKETSGLMLDVGPYMKALEYACGIE 619
ADAGE FSYQNMNKAFQVLMELE P+L SLGKGRYYKETSGLMLDVG Y KALEYACGIE
Sbjct: 124 ADAGEAFSYQNMNKAFQVLMELENPVLISLGKGRYYKETSGLMLDVGAYTKALEYACGIE 183
Query: 620 AEVVGKPSPEFFKSALREMGVDASQAVMXXXXXXXXXXXAQRCGIRALQVRTGKFRPSDE 799
AEVVGKPSPE+F+SAL+EM V+A +AVM AQRCG+RALQVRTGKFRPSDE
Sbjct: 184 AEVVGKPSPEYFRSALKEMAVEAHEAVMIGDDIVGDVGGAQRCGMRALQVRTGKFRPSDE 243
Query: 800 HHPEVKADGYVDNLAEAVDLLLQHADQ 880
HPEVKADGYVDNLA+AVDLLLQHAD+
Sbjct: 244 RHPEVKADGYVDNLAQAVDLLLQHADK 270
>ref|XP_537270.1| PREDICTED: similar to haloacid dehalogenase-like hydrolase domain
containing 2 [Canis familiaris].
Length = 263
Score = 137 bits (344), Expect = 3e-32
Identities = 82/216 (37%), Positives = 116/216 (53%)
Frame = +2
Query: 224 FCTNESQKSXXXXXXXXXXXXFDISEGEVTAPAPATCLILKERGLRPHLLVHDGVRSEFG 403
F TN +++S FDISE E+ A +++++ +RP LLV D +F
Sbjct: 44 FVTNTTKESKQDLLDRLKKLEFDISEDEIFTSLTAARNLVEQKQVRPMLLVDDRALPDFK 103
Query: 404 QIDTSNPNCVVIADAGEDFSYQNMNKAFQVLMELEKPILFSLGKGRYYKETSGLMLDVGP 583
I TS+PN VVI A E F YQ +N+AF++L L+ L ++ K RYYK GL L GP
Sbjct: 104 GIQTSDPNAVVIGLAPEHFHYQILNQAFRLL--LDGAPLIAIHKARYYKRKDGLALGPGP 161
Query: 584 YMKALEYACGIEAEVVGKPSPEFFKSALREMGVDASQAVMXXXXXXXXXXXAQRCGIRAL 763
++ ALEYA +A VVGKP FF ALR+ G + +A+M AQ G+ +
Sbjct: 162 FVTALEYATDTKATVVGKPEKTFFLEALRDTGCEPEEAIMIGDDCRDDVGGAQNVGMLGI 221
Query: 764 QVRTGKFRPSDEHHPEVKADGYVDNLAEAVDLLLQH 871
V+TGK+R +DE ++ AVD +LQH
Sbjct: 222 LVKTGKYRAADEEKINPPPYLTCESFPHAVDHILQH 257
Database: RefSeq49_CP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,874,504
Number of sequences in database: 33,336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33336
Number of Hits to DB: 53,646,383
Number of extensions: 1645223
Number of successful extensions: 9546
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 9383
Number of HSP's successfully gapped: 2
Length of query: 459
Length of database: 18,874,504
Length adjustment: 106
Effective length of query: 353
Effective length of database: 15,340,888
Effective search space: 5415333464
Effective search space used: 5415333464
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to RefSeqBP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-013715
(1378 letters)
Database: RefSeq49_BP.fasta
33,088 sequences; 17,681,374 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001074381.1| phospholysine phosphohistidine inorganic pyr... 389 e-108
Alignment gi|NP_001030194.1| haloacid dehalogenase-like hydrolase domain-... 137 3e-32
Alignment gi|XP_002697806.1| PREDICTED: haloacid dehalogenase-like hydrol... 60 6e-09
>ref|NP_001074381.1| phospholysine phosphohistidine inorganic pyrophosphate phosphatase
[Bos taurus].
Length = 270
Score = 389 bits (999), Expect = e-108
Identities = 200/267 (74%), Positives = 209/267 (78%)
Frame = +2
Query: 80 WGERLAGVRGVLLDISGVLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFCTNESQKSXXX 259
WGERLAGVRGVLLDISGVL FCTNESQKS
Sbjct: 4 WGERLAGVRGVLLDISGVLYDGGEGGGAAIAGSVEAVARLKRSRLKVRFCTNESQKSRAD 63
Query: 260 XXXXXXXXXFDISEGEVTAPAPATCLILKERGLRPHLLVHDGVRSEFGQIDTSNPNCVVI 439
FD+SEGEVTAPAPA CLILK+RGLRPHLLVHDGVRSEF QIDTSNPNCVVI
Sbjct: 64 LVGLLRRLGFDVSEGEVTAPAPAACLILKQRGLRPHLLVHDGVRSEFDQIDTSNPNCVVI 123
Query: 440 ADAGEDFSYQNMNKAFQVLMELEKPILFSLGKGRYYKETSGLMLDVGPYMKALEYACGIE 619
ADAGE FSYQNMNKAFQVLMELE P+LFSLGKGRYYKETSGLMLDVGPYMKALEYACGIE
Sbjct: 124 ADAGEGFSYQNMNKAFQVLMELENPVLFSLGKGRYYKETSGLMLDVGPYMKALEYACGIE 183
Query: 620 AEVVGKPSPEFFKSALREMGVDASQAVMXXXXXXXXXXXAQRCGIRALQVRTGKFRPSDE 799
AEVVGKPSPEFFKSAL+EMGV+A +A+M AQR G+RALQVRTGKFRPSDE
Sbjct: 184 AEVVGKPSPEFFKSALQEMGVEAHEAIMIGDDIVGDVGGAQRYGMRALQVRTGKFRPSDE 243
Query: 800 HHPEVKADGYVDNLAEAVDLLLQHADQ 880
HHPEVKADGYVDNLAEAVDLLLQHAD+
Sbjct: 244 HHPEVKADGYVDNLAEAVDLLLQHADK 270
>ref|NP_001030194.1| haloacid dehalogenase-like hydrolase domain-containing protein 2
[Bos taurus].
Length = 259
Score = 137 bits (344), Expect = 3e-32
Identities = 83/216 (38%), Positives = 115/216 (53%)
Frame = +2
Query: 224 FCTNESQKSXXXXXXXXXXXXFDISEGEVTAPAPATCLILKERGLRPHLLVHDGVRSEFG 403
F TN +++S FDISE E+ A +++++ +RP LLV D +F
Sbjct: 44 FVTNTTKESKQDLLERLKKLEFDISEDEIFTSLTAARNLVEQKQVRPMLLVDDRALPDFK 103
Query: 404 QIDTSNPNCVVIADAGEDFSYQNMNKAFQVLMELEKPILFSLGKGRYYKETSGLMLDVGP 583
I TS+PN VVI A E F YQ +N+AF++L L+ L ++ K RYYK GL L GP
Sbjct: 104 GIQTSDPNAVVIGLAPEHFHYQILNQAFRLL--LDGAPLIAIHKARYYKRKDGLALGPGP 161
Query: 584 YMKALEYACGIEAEVVGKPSPEFFKSALREMGVDASQAVMXXXXXXXXXXXAQRCGIRAL 763
++ ALEYA +A VVGKP FF ALR G + + VM AQ G+R +
Sbjct: 162 FVTALEYATDTKATVVGKPEKTFFLEALRGTGCEPEETVMIGDDCRDDVGGAQNAGMRGI 221
Query: 764 QVRTGKFRPSDEHHPEVKADGYVDNLAEAVDLLLQH 871
V+TGK+R +DE ++ AVD +LQH
Sbjct: 222 LVKTGKYRAADEDKINPAPYLTCESFPHAVDHILQH 257
>ref|XP_002697806.1| PREDICTED: haloacid dehalogenase-like hydrolase domain-containing
protein 2-like [Bos taurus].
Length = 132
Score = 59.7 bits (143), Expect = 6e-09
Identities = 34/89 (38%), Positives = 49/89 (55%)
Frame = +2
Query: 224 FCTNESQKSXXXXXXXXXXXXFDISEGEVTAPAPATCLILKERGLRPHLLVHDGVRSEFG 403
F TN +++S FDISE E+ A +++++ +RP LLV D +F
Sbjct: 44 FVTNTTKESKQDLLERLKKLEFDISEDEIFTSLTAARNLVEQKQVRPMLLVDDRALPDFK 103
Query: 404 QIDTSNPNCVVIADAGEDFSYQNMNKAFQ 490
I TS+PN VVI A E F YQ +N+AF+
Sbjct: 104 GIQTSDPNAVVIGLAPEHFHYQILNQAFR 132
Database: RefSeq49_BP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 17,681,374
Number of sequences in database: 33,088
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33088
Number of Hits to DB: 51,674,881
Number of extensions: 1640009
Number of successful extensions: 8939
Number of sequences better than 1.0e-05: 3
Number of HSP's gapped: 8831
Number of HSP's successfully gapped: 3
Length of query: 459
Length of database: 17,681,374
Length adjustment: 106
Effective length of query: 353
Effective length of database: 14,174,046
Effective search space: 5003438238
Effective search space used: 5003438238
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to RefSeqSP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-013715
(1378 letters)
Database: RefSeq49_SP.fasta
24,897 sequences; 11,343,932 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001230537.1| phospholysine phosphohistidine inorganic pyr... 414 e-116
Alignment gi|XP_003361499.1| PREDICTED: haloacid dehalogenase-like hydrol... 134 1e-31
Alignment gi|XP_003361498.1| PREDICTED: haloacid dehalogenase-like hydrol... 134 1e-31
Alignment gi|XP_003122339.1| PREDICTED: haloacid dehalogenase-like hydrol... 134 1e-31
>ref|NP_001230537.1| phospholysine phosphohistidine inorganic pyrophosphate phosphatase
[Sus scrofa].
Length = 270
Score = 414 bits (1063), Expect = e-116
Identities = 215/267 (80%), Positives = 215/267 (80%)
Frame = +2
Query: 80 WGERLAGVRGVLLDISGVLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFCTNESQKSXXX 259
WGERLAGVRGVLLDISGVL FCTNESQKS
Sbjct: 4 WGERLAGVRGVLLDISGVLYDGGEGGGAAIAGSVEAVARLKRSRLKVRFCTNESQKSRGD 63
Query: 260 XXXXXXXXXFDISEGEVTAPAPATCLILKERGLRPHLLVHDGVRSEFGQIDTSNPNCVVI 439
FDISEGEVTAPAPATCLILKERGLRPHLLVHDGVRSEFGQIDTSNPNCVVI
Sbjct: 64 LVRLLRRLGFDISEGEVTAPAPATCLILKERGLRPHLLVHDGVRSEFGQIDTSNPNCVVI 123
Query: 440 ADAGEDFSYQNMNKAFQVLMELEKPILFSLGKGRYYKETSGLMLDVGPYMKALEYACGIE 619
ADAGEDFSYQNMNKAFQVLMELEKPILFSLGKGRYYKETSGLMLDVGPYMKALEYACGIE
Sbjct: 124 ADAGEDFSYQNMNKAFQVLMELEKPILFSLGKGRYYKETSGLMLDVGPYMKALEYACGIE 183
Query: 620 AEVVGKPSPEFFKSALREMGVDASQAVMXXXXXXXXXXXAQRCGIRALQVRTGKFRPSDE 799
AEVVGKPSPEFFKSALREMGVDASQAVM AQRCGIRALQVRTGKFRPSDE
Sbjct: 184 AEVVGKPSPEFFKSALREMGVDASQAVMIGDDIVGDVGGAQRCGIRALQVRTGKFRPSDE 243
Query: 800 HHPEVKADGYVDNLAEAVDLLLQHADQ 880
HHPEVKADGYVDNLAEAVDLLLQHADQ
Sbjct: 244 HHPEVKADGYVDNLAEAVDLLLQHADQ 270
>ref|XP_003361499.1| PREDICTED: haloacid dehalogenase-like hydrolase domain-containing
protein 2-like isoform 2 [Sus scrofa].
Length = 219
Score = 134 bits (337), Expect = 1e-31
Identities = 83/218 (38%), Positives = 119/218 (54%), Gaps = 2/218 (0%)
Frame = +2
Query: 224 FCTNESQKSXXXXXXXXXXXXFDISEGEVTAPAPATCLILKERGLRPHLLVHDGVRSEFG 403
F TN +++S FDISE E+ A +++++ +RP LLV D +F
Sbjct: 4 FVTNTTKESKQDLLERLKKLEFDISEDEIFTSLTAARNLVEQKQVRPMLLVDDRALPDFK 63
Query: 404 QIDTSNPNCVVIADAGEDFSYQNMNKAFQVLMELEKPILFSLGKGRYYKETSGLMLDVGP 583
I+T +PN VVI A E F YQ +N+AF++L L+ L ++ K RYYK GL L GP
Sbjct: 64 GIETGDPNAVVIGLAPEHFHYQILNQAFRLL--LDGAPLIAIHKARYYKRKDGLALGPGP 121
Query: 584 YMKALEYACGIEAEVVGKPSPEFFKSALREMGVDASQAVMXXXXXXXXXXXAQRCGIRAL 763
++ ALEYA +A VVGKP FF ALR G + +AVM AQ G+ +
Sbjct: 122 FVTALEYATDSKATVVGKPEKTFFLEALRGAGCEPEEAVMIGDDCRDDVGGAQNVGMLGI 181
Query: 764 QVRTGKFRPSDEHHPEVKADGYV--DNLAEAVDLLLQH 871
V+TGK+R +DE ++ Y+ ++ AVD +LQH
Sbjct: 182 LVKTGKYRAADE--AKINPPPYLTCESFPHAVDHILQH 217
>ref|XP_003361498.1| PREDICTED: haloacid dehalogenase-like hydrolase domain-containing
protein 2-like isoform 1 [Sus scrofa].
Length = 259
Score = 134 bits (337), Expect = 1e-31
Identities = 83/218 (38%), Positives = 119/218 (54%), Gaps = 2/218 (0%)
Frame = +2
Query: 224 FCTNESQKSXXXXXXXXXXXXFDISEGEVTAPAPATCLILKERGLRPHLLVHDGVRSEFG 403
F TN +++S FDISE E+ A +++++ +RP LLV D +F
Sbjct: 44 FVTNTTKESKQDLLERLKKLEFDISEDEIFTSLTAARNLVEQKQVRPMLLVDDRALPDFK 103
Query: 404 QIDTSNPNCVVIADAGEDFSYQNMNKAFQVLMELEKPILFSLGKGRYYKETSGLMLDVGP 583
I+T +PN VVI A E F YQ +N+AF++L L+ L ++ K RYYK GL L GP
Sbjct: 104 GIETGDPNAVVIGLAPEHFHYQILNQAFRLL--LDGAPLIAIHKARYYKRKDGLALGPGP 161
Query: 584 YMKALEYACGIEAEVVGKPSPEFFKSALREMGVDASQAVMXXXXXXXXXXXAQRCGIRAL 763
++ ALEYA +A VVGKP FF ALR G + +AVM AQ G+ +
Sbjct: 162 FVTALEYATDSKATVVGKPEKTFFLEALRGAGCEPEEAVMIGDDCRDDVGGAQNVGMLGI 221
Query: 764 QVRTGKFRPSDEHHPEVKADGYV--DNLAEAVDLLLQH 871
V+TGK+R +DE ++ Y+ ++ AVD +LQH
Sbjct: 222 LVKTGKYRAADE--AKINPPPYLTCESFPHAVDHILQH 257
>ref|XP_003122339.1| PREDICTED: haloacid dehalogenase-like hydrolase domain-containing
protein 2-like [Sus scrofa].
Length = 259
Score = 134 bits (337), Expect = 1e-31
Identities = 83/218 (38%), Positives = 119/218 (54%), Gaps = 2/218 (0%)
Frame = +2
Query: 224 FCTNESQKSXXXXXXXXXXXXFDISEGEVTAPAPATCLILKERGLRPHLLVHDGVRSEFG 403
F TN +++S FDISE E+ A +++++ +RP LLV D +F
Sbjct: 44 FVTNTTKESKQDLLERLKKLEFDISEDEIFTSLTAARNLVEQKQVRPMLLVDDRALPDFK 103
Query: 404 QIDTSNPNCVVIADAGEDFSYQNMNKAFQVLMELEKPILFSLGKGRYYKETSGLMLDVGP 583
I+T +PN VVI A E F YQ +N+AF++L L+ L ++ K RYYK GL L GP
Sbjct: 104 GIETGDPNAVVIGLAPEHFHYQILNQAFRLL--LDGAPLIAIHKARYYKRKDGLALGPGP 161
Query: 584 YMKALEYACGIEAEVVGKPSPEFFKSALREMGVDASQAVMXXXXXXXXXXXAQRCGIRAL 763
++ ALEYA +A VVGKP FF ALR G + +AVM AQ G+ +
Sbjct: 162 FVTALEYATDSKATVVGKPEKTFFLEALRGAGCEPEEAVMIGDDCRDDVGGAQNVGMLGI 221
Query: 764 QVRTGKFRPSDEHHPEVKADGYV--DNLAEAVDLLLQH 871
V+TGK+R +DE ++ Y+ ++ AVD +LQH
Sbjct: 222 LVKTGKYRAADE--AKINPPPYLTCESFPHAVDHILQH 257
Database: RefSeq49_SP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 11,343,932
Number of sequences in database: 24,897
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 24897
Number of Hits to DB: 33,923,927
Number of extensions: 1132271
Number of successful extensions: 6055
Number of sequences better than 1.0e-05: 4
Number of HSP's gapped: 5867
Number of HSP's successfully gapped: 4
Length of query: 459
Length of database: 11,343,932
Length adjustment: 102
Effective length of query: 357
Effective length of database: 8,804,438
Effective search space: 3143184366
Effective search space used: 3143184366
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to RefSeqMP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-013715
(1378 letters)
Database: RefSeq49_MP.fasta
30,036 sequences; 15,617,559 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_083885.1| phospholysine phosphohistidine inorganic pyroph... 360 2e-99
Alignment gi|NP_001034290.1| haloacid dehalogenase-like hydrolase domain-... 129 4e-30
Alignment gi|NP_084102.1| haloacid dehalogenase-like hydrolase domain-con... 129 4e-30
Alignment gi|NP_001034291.1| haloacid dehalogenase-like hydrolase domain-... 58 2e-08
>ref|NP_083885.1| phospholysine phosphohistidine inorganic pyrophosphate phosphatase
[Mus musculus].
Length = 270
Score = 360 bits (923), Expect = 2e-99
Identities = 185/267 (69%), Positives = 200/267 (74%)
Frame = +2
Query: 80 WGERLAGVRGVLLDISGVLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFCTNESQKSXXX 259
W ERL GVRGVLLDISGVL FCTNESQKS
Sbjct: 4 WAERLTGVRGVLLDISGVLCDSSASGATAIAGSVEAVARLKQSPLKVRFCTNESQKSLRE 63
Query: 260 XXXXXXXXXFDISEGEVTAPAPATCLILKERGLRPHLLVHDGVRSEFGQIDTSNPNCVVI 439
FDISE EVTAPAPATC ILKERGLRPHLL+H+GVRSEF ID SNPNCVVI
Sbjct: 64 LVGVLQQLGFDISEEEVTAPAPATCQILKERGLRPHLLIHEGVRSEFDDIDMSNPNCVVI 123
Query: 440 ADAGEDFSYQNMNKAFQVLMELEKPILFSLGKGRYYKETSGLMLDVGPYMKALEYACGIE 619
ADAGE FSYQNMN+AFQVLMELE P+L SLGKGRYYKETSGLMLDVG YMKALEYACGI+
Sbjct: 124 ADAGEAFSYQNMNRAFQVLMELENPVLISLGKGRYYKETSGLMLDVGGYMKALEYACGIK 183
Query: 620 AEVVGKPSPEFFKSALREMGVDASQAVMXXXXXXXXXXXAQRCGIRALQVRTGKFRPSDE 799
AEVVGKPSPEFFKSAL+ +GV+A QA+M AQ+CG+RALQVRTGKFRP DE
Sbjct: 184 AEVVGKPSPEFFKSALQAIGVEAHQAIMIGDDIVGDVGGAQQCGMRALQVRTGKFRPGDE 243
Query: 800 HHPEVKADGYVDNLAEAVDLLLQHADQ 880
HHPEV+ADGYVDNLAEAVDLLL++ D+
Sbjct: 244 HHPEVQADGYVDNLAEAVDLLLKYTDK 270
>ref|NP_001034290.1| haloacid dehalogenase-like hydrolase domain-containing protein 2
isoform 1 [Mus musculus].
Length = 259
Score = 129 bits (325), Expect = 4e-30
Identities = 79/216 (36%), Positives = 113/216 (52%)
Frame = +2
Query: 224 FCTNESQKSXXXXXXXXXXXXFDISEGEVTAPAPATCLILKERGLRPHLLVHDGVRSEFG 403
F TN +++S F+ISE E+ A +++++ +RP LLV D EF
Sbjct: 44 FVTNTTKESKKDLLERLKKLEFEISEDEIFTSLTAARNLIEQKQVRPMLLVDDRALPEFT 103
Query: 404 QIDTSNPNCVVIADAGEDFSYQNMNKAFQVLMELEKPILFSLGKGRYYKETSGLMLDVGP 583
+ T +PN VVI A E F YQ +N+AF++L L+ L ++ K RYYK GL L GP
Sbjct: 104 GVQTQDPNAVVIGLAPEHFHYQLLNQAFRLL--LDGAPLIAIHKARYYKRKDGLALGPGP 161
Query: 584 YMKALEYACGIEAEVVGKPSPEFFKSALREMGVDASQAVMXXXXXXXXXXXAQRCGIRAL 763
++ ALEYA +A VVGKP FF ALR+ +AVM AQ G+ +
Sbjct: 162 FVTALEYATDTKAMVVGKPEKTFFLEALRDADCAPEEAVMIGDDCRDDVDGAQNIGMLGI 221
Query: 764 QVRTGKFRPSDEHHPEVKADGYVDNLAEAVDLLLQH 871
V+TGK++ +DE ++ AVD +LQH
Sbjct: 222 LVKTGKYKAADEEKINPPPYLTCESFPHAVDHILQH 257
>ref|NP_084102.1| haloacid dehalogenase-like hydrolase domain-containing protein 2
isoform 1 [Mus musculus].
Length = 259
Score = 129 bits (325), Expect = 4e-30
Identities = 79/216 (36%), Positives = 113/216 (52%)
Frame = +2
Query: 224 FCTNESQKSXXXXXXXXXXXXFDISEGEVTAPAPATCLILKERGLRPHLLVHDGVRSEFG 403
F TN +++S F+ISE E+ A +++++ +RP LLV D EF
Sbjct: 44 FVTNTTKESKKDLLERLKKLEFEISEDEIFTSLTAARNLIEQKQVRPMLLVDDRALPEFT 103
Query: 404 QIDTSNPNCVVIADAGEDFSYQNMNKAFQVLMELEKPILFSLGKGRYYKETSGLMLDVGP 583
+ T +PN VVI A E F YQ +N+AF++L L+ L ++ K RYYK GL L GP
Sbjct: 104 GVQTQDPNAVVIGLAPEHFHYQLLNQAFRLL--LDGAPLIAIHKARYYKRKDGLALGPGP 161
Query: 584 YMKALEYACGIEAEVVGKPSPEFFKSALREMGVDASQAVMXXXXXXXXXXXAQRCGIRAL 763
++ ALEYA +A VVGKP FF ALR+ +AVM AQ G+ +
Sbjct: 162 FVTALEYATDTKAMVVGKPEKTFFLEALRDADCAPEEAVMIGDDCRDDVDGAQNIGMLGI 221
Query: 764 QVRTGKFRPSDEHHPEVKADGYVDNLAEAVDLLLQH 871
V+TGK++ +DE ++ AVD +LQH
Sbjct: 222 LVKTGKYKAADEEKINPPPYLTCESFPHAVDHILQH 257
>ref|NP_001034291.1| haloacid dehalogenase-like hydrolase domain-containing protein 2
isoform 2 [Mus musculus].
Length = 146
Score = 57.8 bits (138), Expect = 2e-08
Identities = 32/89 (35%), Positives = 48/89 (53%)
Frame = +2
Query: 224 FCTNESQKSXXXXXXXXXXXXFDISEGEVTAPAPATCLILKERGLRPHLLVHDGVRSEFG 403
F TN +++S F+ISE E+ A +++++ +RP LLV D EF
Sbjct: 44 FVTNTTKESKKDLLERLKKLEFEISEDEIFTSLTAARNLIEQKQVRPMLLVDDRALPEFT 103
Query: 404 QIDTSNPNCVVIADAGEDFSYQNMNKAFQ 490
+ T +PN VVI A E F YQ +N+AF+
Sbjct: 104 GVQTQDPNAVVIGLAPEHFHYQLLNQAFR 132
Database: RefSeq49_MP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 15,617,559
Number of sequences in database: 30,036
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 30036
Number of Hits to DB: 43,642,118
Number of extensions: 1285138
Number of successful extensions: 6516
Number of sequences better than 1.0e-05: 4
Number of HSP's gapped: 6424
Number of HSP's successfully gapped: 4
Length of query: 459
Length of database: 15,617,559
Length adjustment: 105
Effective length of query: 354
Effective length of database: 12,463,779
Effective search space: 4412177766
Effective search space used: 4412177766
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to RefSeqHP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-013715
(1378 letters)
Database: RefSeq49_HP.fasta
32,964 sequences; 18,297,164 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_071409.3| phospholysine phosphohistidine inorganic pyroph... 378 e-105
Alignment gi|NP_001161352.1| phospholysine phosphohistidine inorganic pyr... 284 1e-76
Alignment gi|NP_115500.1| haloacid dehalogenase-like hydrolase domain-con... 135 7e-32
>ref|NP_071409.3| phospholysine phosphohistidine inorganic pyrophosphate phosphatase
isoform 1 [Homo sapiens].
Length = 270
Score = 378 bits (970), Expect = e-105
Identities = 195/267 (73%), Positives = 206/267 (77%)
Frame = +2
Query: 80 WGERLAGVRGVLLDISGVLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFCTNESQKSXXX 259
WG+RLAGVRGVLLDISGVL FCTNESQKS
Sbjct: 4 WGKRLAGVRGVLLDISGVLYDSGAGGGTAIAGSVEAVARLKRSRLKVRFCTNESQKSRAE 63
Query: 260 XXXXXXXXXFDISEGEVTAPAPATCLILKERGLRPHLLVHDGVRSEFGQIDTSNPNCVVI 439
FDISE EVTAPAPA C ILKE+GLRP+LL+HDGVRSEF QIDTSNPNCVVI
Sbjct: 64 LVGQLQRLGFDISEQEVTAPAPAACQILKEQGLRPYLLIHDGVRSEFDQIDTSNPNCVVI 123
Query: 440 ADAGEDFSYQNMNKAFQVLMELEKPILFSLGKGRYYKETSGLMLDVGPYMKALEYACGIE 619
ADAGE FSYQNMN AFQVLMELEKP+L SLGKGRYYKETSGLMLDVGPYMKALEYACGI+
Sbjct: 124 ADAGESFSYQNMNNAFQVLMELEKPVLISLGKGRYYKETSGLMLDVGPYMKALEYACGIK 183
Query: 620 AEVVGKPSPEFFKSALREMGVDASQAVMXXXXXXXXXXXAQRCGIRALQVRTGKFRPSDE 799
AEVVGKPSPEFFKSAL+ +GV+A QAVM AQRCG+RALQVRTGKFRPSDE
Sbjct: 184 AEVVGKPSPEFFKSALQAIGVEAHQAVMIGDDIVGDVGGAQRCGMRALQVRTGKFRPSDE 243
Query: 800 HHPEVKADGYVDNLAEAVDLLLQHADQ 880
HHPEVKADGYVDNLAEAVDLLLQHAD+
Sbjct: 244 HHPEVKADGYVDNLAEAVDLLLQHADK 270
>ref|NP_001161352.1| phospholysine phosphohistidine inorganic pyrophosphate phosphatase
isoform 2 [Homo sapiens].
Length = 210
Score = 284 bits (727), Expect = 1e-76
Identities = 147/206 (71%), Positives = 156/206 (75%)
Frame = +2
Query: 80 WGERLAGVRGVLLDISGVLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFCTNESQKSXXX 259
WG+RLAGVRGVLLDISGVL FCTNESQKS
Sbjct: 4 WGKRLAGVRGVLLDISGVLYDSGAGGGTAIAGSVEAVARLKRSRLKVRFCTNESQKSRAE 63
Query: 260 XXXXXXXXXFDISEGEVTAPAPATCLILKERGLRPHLLVHDGVRSEFGQIDTSNPNCVVI 439
FDISE EVTAPAPA C ILKE+GLRP+LL+HDGVRSEF QIDTSNPNCVVI
Sbjct: 64 LVGQLQRLGFDISEQEVTAPAPAACQILKEQGLRPYLLIHDGVRSEFDQIDTSNPNCVVI 123
Query: 440 ADAGEDFSYQNMNKAFQVLMELEKPILFSLGKGRYYKETSGLMLDVGPYMKALEYACGIE 619
ADAGE FSYQNMN AFQVLMELEKP+L SLGKGRYYKETSGLMLDVGPYMKALEYACGI+
Sbjct: 124 ADAGESFSYQNMNNAFQVLMELEKPVLISLGKGRYYKETSGLMLDVGPYMKALEYACGIK 183
Query: 620 AEVVGKPSPEFFKSALREMGVDASQA 697
AEVVGKPSPEFFKSAL+ +GV+A QA
Sbjct: 184 AEVVGKPSPEFFKSALQAIGVEAHQA 209
>ref|NP_115500.1| haloacid dehalogenase-like hydrolase domain-containing protein 2
[Homo sapiens].
Length = 259
Score = 135 bits (341), Expect = 7e-32
Identities = 84/216 (38%), Positives = 114/216 (52%)
Frame = +2
Query: 224 FCTNESQKSXXXXXXXXXXXXFDISEGEVTAPAPATCLILKERGLRPHLLVHDGVRSEFG 403
F TN +++S FDISE E+ A +L+ + +RP LLV D +F
Sbjct: 44 FVTNTTKESKQDLLERLRKLEFDISEDEIFTSLTAARSLLERKQVRPMLLVDDRALPDFK 103
Query: 404 QIDTSNPNCVVIADAGEDFSYQNMNKAFQVLMELEKPILFSLGKGRYYKETSGLMLDVGP 583
I TS+PN VV+ A E F YQ +N+AF++L L+ L ++ K RYYK GL L GP
Sbjct: 104 GIQTSDPNAVVMGLAPEHFHYQILNQAFRLL--LDGAPLIAIHKARYYKRKDGLALGPGP 161
Query: 584 YMKALEYACGIEAEVVGKPSPEFFKSALREMGVDASQAVMXXXXXXXXXXXAQRCGIRAL 763
++ ALEYA +A VVGKP FF ALR G + +AVM AQ G+ +
Sbjct: 162 FVTALEYATDTKATVVGKPEKTFFLEALRGTGCEPEEAVMIGDDCRDDVGGAQDVGMLGI 221
Query: 764 QVRTGKFRPSDEHHPEVKADGYVDNLAEAVDLLLQH 871
V+TGK+R SDE ++ AVD +LQH
Sbjct: 222 LVKTGKYRASDEEKINPPPYLTCESFPHAVDHILQH 257
Database: RefSeq49_HP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,297,164
Number of sequences in database: 32,964
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 32964
Number of Hits to DB: 52,303,108
Number of extensions: 1581300
Number of successful extensions: 8433
Number of sequences better than 1.0e-05: 3
Number of HSP's gapped: 8338
Number of HSP's successfully gapped: 3
Length of query: 459
Length of database: 18,297,164
Length adjustment: 106
Effective length of query: 353
Effective length of database: 14,802,980
Effective search space: 5225451940
Effective search space used: 5225451940
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to Sscrofa10_2
BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-013715
(1378 letters)
Database: Sscrofa_10.2.fasta
4582 sequences; 2,808,509,378 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Sscrofa_Chr14 803 0.0
>Sscrofa_Chr14
|| Length = 153851969
Score = 803 bits (405), Expect = 0.0
Identities = 415/417 (99%), Gaps = 1/417 (0%)
Strand = Plus / Plus
Query: 963 gacaggcggacgagagggtctgggccgggcagttctgggctccctgccctgggccaccag 1022
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 145497977 gacaggcggacgagagggtctgggccgggcagttctgggctccctgccctgggccaccag 145498036
Query: 1023 cccctcctgtgcctccctctgcccacaccccccttcgcagcacagtttgatccccacctg 1082
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 145498037 cccctcctgtgcctccctctgcccacaccccccttcgcagcacagtttgatccccacctg 145498096
Query: 1083 agggcctggcccctgcctcgcttccctgctgaggtcaggaagtgggcgcacctgctggat 1142
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 145498097 agggcctggcccctgcctcgcttccctgctgaggtcaggaagtgggcgcacctgctggat 145498156
Query: 1143 ccccgctctcactctccatttgtgctttaattgcgctggcacactagccccgggcatttg 1202
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 145498157 ccccgctctcactctccatttgtgctttaattgcgctggcacactagccccgggcatttg 145498216
Query: 1203 ctctctagtccttgccctttagggaggcgcctggagaaagctgggcctcccgggcacggg 1262
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 145498217 ctctctagtccttgccttttagggaggcgcctggagaaagctgggcctcccgggcacggg 145498276
Query: 1263 ccttgcagcccagagctgagccagcctccctccgactctgccc-acggccctgtccccgc 1321
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 145498277 ccttgcagcccagagctgagccagcctccctccgactctgcccaacggccctgtccccgc 145498336
Query: 1322 ccagcgtcagggaggccgctcagtgctccccatgccccccaaggattcagcccacct 1378
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 145498337 ccagcgtcagggaggccgctcagtgctccccatgccccccaaggattcagcccacct 145498393
Score = 379 bits (191), Expect = e-102
Identities = 191/191 (100%)
Strand = Plus / Plus
Query: 194 aggctgaagcggtcccggctgaaggtgaggttctgcaccaacgagtcacagaagtcccgg 253
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 145381348 aggctgaagcggtcccggctgaaggtgaggttctgcaccaacgagtcacagaagtcccgg 145381407
Query: 254 ggggacctggtgcggctgcttcggcggctgggcttcgacatctccgagggcgaggtgacc 313
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 145381408 ggggacctggtgcggctgcttcggcggctgggcttcgacatctccgagggcgaggtgacc 145381467
Query: 314 gccccagccccggccacctgcctgatcctgaaagagcgaggcctgcggccacacctgctt 373
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 145381468 gccccagccccggccacctgcctgatcctgaaagagcgaggcctgcggccacacctgctt 145381527
Query: 374 gtccacgatgg 384
|||||||||||
Sbjct: 145381528 gtccacgatgg 145381538
Score = 307 bits (155), Expect = 9e-81
Identities = 155/155 (100%)
Strand = Plus / Plus
Query: 383 ggagtccgctcggaatttggccagattgacacatccaacccaaactgtgtcgtcattgct 442
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 145390129 ggagtccgctcggaatttggccagattgacacatccaacccaaactgtgtcgtcattgct 145390188
Query: 443 gatgcaggagaagacttttcttatcaaaacatgaataaagcattccaggtcctcatggag 502
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 145390189 gatgcaggagaagacttttcttatcaaaacatgaataaagcattccaggtcctcatggag 145390248
Query: 503 ctggaaaagcccatactcttctcgctgggaaaagg 537
|||||||||||||||||||||||||||||||||||
Sbjct: 145390249 ctggaaaagcccatactcttctcgctgggaaaagg 145390283
Score = 230 bits (116), Expect = 2e-57
Identities = 116/116 (100%)
Strand = Plus / Plus
Query: 784 caggcccagtgacgagcatcacccagaagtaaaggccgacggatacgtggacaacctcgc 843
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 145497798 caggcccagtgacgagcatcacccagaagtaaaggccgacggatacgtggacaacctcgc 145497857
Query: 844 ggaggccgtggacctgctgctgcagcatgcggaccagtgacgggccttccgggagg 899
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 145497858 ggaggccgtggacctgctgctgcagcatgcggaccagtgacgggccttccgggagg 145497913
Score = 210 bits (106), Expect = 2e-51
Identities = 127/135 (94%), Gaps = 1/135 (0%)
Strand = Plus / Minus
Query: 5 cgcggcttcc-ggcaccggttgggacgcggggtnnnnnnncccccttcaggtgcaggtcg 63
|||||||||| |||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 145285174 cgcggcttccaggcaccggttgggacgcggggtgggggggcccccttcaggtgcaggtcg 145285115
Query: 64 gggcgccatggccgcgtggggcgagcggctggctggcgtgcgcggggtgctgctcgacat 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 145285114 gggcgccatggccgcgtggggcgagcggctggctggcgtgcgcggggtgctgctcgacat 145285055
Query: 124 ctcgggcgtgctgta 138
|||||||||||||||
Sbjct: 145285054 ctcgggcgtgctgta 145285040
Score = 190 bits (96), Expect = 1e-45
Identities = 96/96 (100%)
Strand = Plus / Plus
Query: 600 agtacgcctgtggtatcgaagccgaggtggtggggaagccttctccggagtttttcaagt 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 145400233 agtacgcctgtggtatcgaagccgaggtggtggggaagccttctccggagtttttcaagt 145400292
Query: 660 ctgccctgcgagagatgggggtggatgcctcccagg 695
||||||||||||||||||||||||||||||||||||
Sbjct: 145400293 ctgccctgcgagagatgggggtggatgcctcccagg 145400328
Score = 190 bits (96), Expect = 1e-45
Identities = 96/96 (100%)
Strand = Plus / Plus
Query: 692 caggccgtcatgatcggggatgacatcgtgggcgacgttggcggtgcccagcggtgtggc 751
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 145415391 caggccgtcatgatcggggatgacatcgtgggcgacgttggcggtgcccagcggtgtggc 145415450
Query: 752 atcagagcgctgcaggtgcggacggggaagttcagg 787
||||||||||||||||||||||||||||||||||||
Sbjct: 145415451 atcagagcgctgcaggtgcggacggggaagttcagg 145415486
Score = 129 bits (65), Expect = 4e-27
Identities = 65/65 (100%)
Strand = Plus / Plus
Query: 537 gacgctattacaaggagacctctggcctgatgctggacgtcggcccctacatgaaggccc 596
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 145399341 gacgctattacaaggagacctctggcctgatgctggacgtcggcccctacatgaaggccc 145399400
Query: 597 tggag 601
|||||
Sbjct: 145399401 tggag 145399405
Database: Sscrofa_10.2.fasta
Posted date: Nov 16, 2011 10:34 AM
Number of letters in database: 2,808,509,378
Number of sequences in database: 4582
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4582
Number of Hits to DB: 29,606,955
Number of extensions: 211
Number of successful extensions: 211
Number of sequences better than 1.0e-05: 1
Number of HSP's gapped: 209
Number of HSP's successfully gapped: 8
Length of query: 1378
Length of database: 2,808,509,378
Length adjustment: 21
Effective length of query: 1357
Effective length of database: 2,808,413,156
Effective search space: 3811016652692
Effective search space used: 3811016652692
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 18 (36.2 bits)
S2: 30 (60.0 bits)