Search to RefSeqBP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-013726
(1198 letters)
Database: RefSeq49_BP.fasta
33,088 sequences; 17,681,374 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001012705.2| calcium-dependent phospholipase A2 PLA2G2D4 ... 200 2e-51
Alignment gi|NP_001015888.1| calcium-dependent phospholipase A2 PLA2G2D5 ... 199 3e-51
Alignment gi|NP_001009572.1| calcium-dependent phospholipase A2 PLA2G2D1 ... 194 1e-49
Alignment gi|XP_002685775.1| PREDICTED: similar to phospholipase A2 group... 159 4e-39
Alignment gi|XP_871834.1| PREDICTED: phospholipase A2, group IIA [Bos tau... 159 4e-39
Alignment gi|NP_001020495.1| phospholipase A2, membrane associated precur... 149 4e-36
Alignment gi|NP_001098980.1| hypothetical protein LOC100125947 [Bos tauru... 146 4e-35
Alignment gi|NP_001069288.1| phospholipase A2, membrane associated [Bos t... 142 8e-34
Alignment gi|NP_001095992.1| group IIF secretory phospholipase A2 [Bos ta... 136 3e-32
Alignment gi|NP_001179015.1| group IIE secretory phospholipase A2 [Bos ta... 133 3e-31
>ref|NP_001012705.2| calcium-dependent phospholipase A2 PLA2G2D4 [Bos taurus].
Length = 147
Score = 200 bits (508), Expect = 2e-51
Identities = 88/145 (60%), Positives = 108/145 (74%)
Frame = +3
Query: 39 MELPLLCFLVAFAGVIPAQGGILNLNKMIKQVTGKVPFFSYWPYGCHCGIGGRGEPKDAT 218
M L LLC L+ FAGV PA+ IL+LN+M++QVTGK+P F Y YGC+C GG+G+P+DAT
Sbjct: 1 MGLSLLCALLVFAGVAPAEADILDLNEMVRQVTGKIPIFFYSHYGCYCRKGGQGQPRDAT 60
Query: 219 DWCCHAHDCCYSHLKGHGCRTHLDHYRYTFSQGTVQCSDKGSWCERELCACDKGVAFCMK 398
D CC HDCCY HLK C DHY YTF QG VQCS KGSWCE++LCACDK +AFC++
Sbjct: 61 DRCCREHDCCYRHLKSDNCDISFDHYDYTFFQGKVQCSTKGSWCEQQLCACDKTLAFCLQ 120
Query: 399 RNLDSYKKHLRYYWRPHCKGQTPVC 473
RNL++YK HLR R C+G+T C
Sbjct: 121 RNLNTYKNHLRRLSR--CEGETLAC 143
>ref|NP_001015888.1| calcium-dependent phospholipase A2 PLA2G2D5 [Bos taurus].
Length = 147
Score = 199 bits (507), Expect = 3e-51
Identities = 88/145 (60%), Positives = 108/145 (74%)
Frame = +3
Query: 39 MELPLLCFLVAFAGVIPAQGGILNLNKMIKQVTGKVPFFSYWPYGCHCGIGGRGEPKDAT 218
M L LLC L+ FAGV PA+ IL+LN+M++QVTGK+P F Y YGC+C GG+G+P+DAT
Sbjct: 1 MGLSLLCALLVFAGVAPAEADILDLNEMVRQVTGKIPIFFYSHYGCYCRKGGQGQPRDAT 60
Query: 219 DWCCHAHDCCYSHLKGHGCRTHLDHYRYTFSQGTVQCSDKGSWCERELCACDKGVAFCMK 398
D CC HDCCY HLK C DHY YTF QG VQCS KGSWCE++LCACDK +AFC++
Sbjct: 61 DRCCRDHDCCYRHLKSDNCDISFDHYDYTFFQGKVQCSTKGSWCEQQLCACDKTLAFCLQ 120
Query: 399 RNLDSYKKHLRYYWRPHCKGQTPVC 473
RNL++YK HLR R C+G+T C
Sbjct: 121 RNLNTYKNHLRRLSR--CEGETLAC 143
>ref|NP_001009572.1| calcium-dependent phospholipase A2 PLA2G2D1 [Bos taurus].
Length = 147
Score = 194 bits (494), Expect = 1e-49
Identities = 86/145 (59%), Positives = 109/145 (75%)
Frame = +3
Query: 39 MELPLLCFLVAFAGVIPAQGGILNLNKMIKQVTGKVPFFSYWPYGCHCGIGGRGEPKDAT 218
M L LLC L+ FAGV PA+ IL+LN+M++QVTGK+P F Y YGC+C IGG+G P+DAT
Sbjct: 1 MGLSLLCALLVFAGVAPAEADILDLNEMVRQVTGKIPIFFYSHYGCYCRIGGQGLPRDAT 60
Query: 219 DWCCHAHDCCYSHLKGHGCRTHLDHYRYTFSQGTVQCSDKGSWCERELCACDKGVAFCMK 398
D CC+ H+CCY +L H C DHY YTF QG VQCS KGSWCE++LCACDK +AFC++
Sbjct: 61 DRCCYDHNCCYGYLTPHNCDYLYDHYDYTFFQGNVQCSTKGSWCEQQLCACDKTLAFCLQ 120
Query: 399 RNLDSYKKHLRYYWRPHCKGQTPVC 473
RNL++YK LR+ R C+G+T C
Sbjct: 121 RNLNTYKNDLRHLSR--CEGETLAC 143
>ref|XP_002685775.1| PREDICTED: similar to phospholipase A2 group IIA-like [Bos taurus].
Length = 144
Score = 159 bits (403), Expect = 4e-39
Identities = 70/145 (48%), Positives = 90/145 (62%)
Frame = +3
Query: 39 MELPLLCFLVAFAGVIPAQGGILNLNKMIKQVTGKVPFFSYWPYGCHCGIGGRGEPKDAT 218
M+ LL ++ G++ GG+ + KMIK TGK P SY YGCHCG G RG PKDAT
Sbjct: 1 MKTLLLLAVIMAIGLLQVHGGLADFQKMIKFTTGKEPAISYGFYGCHCGAGHRGTPKDAT 60
Query: 219 DWCCHAHDCCYSHLKGHGCRTHLDHYRYTFSQGTVQCSDKGSWCERELCACDKGVAFCMK 398
DWCC HDCCY +L+ GCRT Y + F +G + C D+ +C+R LC CDK A C+
Sbjct: 61 DWCCRVHDCCYENLRKRGCRTSSQSYNFIFQRGQIVCGDQ-DYCKRRLCQCDKRAADCLD 119
Query: 399 RNLDSYKKHLRYYWRPHCKGQTPVC 473
+NL +Y K+L+YY C G TP C
Sbjct: 120 KNLKTYNKNLQYYNNLLCFGSTPKC 144
>ref|XP_871834.1| PREDICTED: phospholipase A2, group IIA [Bos taurus].
Length = 144
Score = 159 bits (403), Expect = 4e-39
Identities = 70/145 (48%), Positives = 90/145 (62%)
Frame = +3
Query: 39 MELPLLCFLVAFAGVIPAQGGILNLNKMIKQVTGKVPFFSYWPYGCHCGIGGRGEPKDAT 218
M+ LL ++ G++ GG+ + KMIK TGK P SY YGCHCG G RG PKDAT
Sbjct: 1 MKTLLLLAVIMAIGLLQVHGGLADFQKMIKFTTGKEPAISYGFYGCHCGAGHRGTPKDAT 60
Query: 219 DWCCHAHDCCYSHLKGHGCRTHLDHYRYTFSQGTVQCSDKGSWCERELCACDKGVAFCMK 398
DWCC HDCCY +L+ GCRT Y + F +G + C D+ +C+R LC CDK A C+
Sbjct: 61 DWCCRVHDCCYENLRKRGCRTSSQSYNFIFQRGQIVCGDQ-DYCKRRLCQCDKRAADCLD 119
Query: 399 RNLDSYKKHLRYYWRPHCKGQTPVC 473
+NL +Y K+L+YY C G TP C
Sbjct: 120 KNLKTYNKNLQYYNNLLCFGSTPKC 144
>ref|NP_001020495.1| phospholipase A2, membrane associated precursor [Bos taurus].
Length = 144
Score = 149 bits (377), Expect = 4e-36
Identities = 66/145 (45%), Positives = 86/145 (59%)
Frame = +3
Query: 39 MELPLLCFLVAFAGVIPAQGGILNLNKMIKQVTGKVPFFSYWPYGCHCGIGGRGEPKDAT 218
M+ LL ++ G++ G +LN KMIK TGK P Y YGC+CG+ GRG PKDAT
Sbjct: 1 MKTLLLLAVIMAIGLLQVHGDLLNFRKMIKLTTGKEPATRYSFYGCYCGMSGRGTPKDAT 60
Query: 219 DWCCHAHDCCYSHLKGHGCRTHLDHYRYTFSQGTVQCSDKGSWCERELCACDKGVAFCMK 398
DWCC AHDCCY +L+ GCRT Y T+ + + C D C+ ++C CDK A C
Sbjct: 61 DWCCRAHDCCYKNLESRGCRTKFLKYNVTYQEDQIVCEDADD-CKSQVCQCDKIAANCFA 119
Query: 399 RNLDSYKKHLRYYWRPHCKGQTPVC 473
NL +Y K LR+Y + C+G P C
Sbjct: 120 ANLKTYNKKLRFYNKFRCRGAAPAC 144
>ref|NP_001098980.1| hypothetical protein LOC100125947 [Bos taurus].
Length = 144
Score = 146 bits (368), Expect = 4e-35
Identities = 65/145 (44%), Positives = 86/145 (59%)
Frame = +3
Query: 39 MELPLLCFLVAFAGVIPAQGGILNLNKMIKQVTGKVPFFSYWPYGCHCGIGGRGEPKDAT 218
M+ LL ++ G++ G +LN MI+ +TGK P SY YGC+CG GRG PKDAT
Sbjct: 1 MKTLLLLAVIMAIGLLQVHGDLLNFRNMIEFMTGKGPATSYRRYGCYCGTRGRGTPKDAT 60
Query: 219 DWCCHAHDCCYSHLKGHGCRTHLDHYRYTFSQGTVQCSDKGSWCERELCACDKGVAFCMK 398
DWCC AHDCCY +L+ GCRT Y T+ + + C D C+ ++C CDK A C
Sbjct: 61 DWCCRAHDCCYRNLESRGCRTKFLKYNVTYQEDQIVCEDADD-CKSQVCQCDKIAANCFA 119
Query: 399 RNLDSYKKHLRYYWRPHCKGQTPVC 473
NL +Y K LR+Y + C+G P C
Sbjct: 120 ANLKTYNKTLRFYDKFRCRGAAPAC 144
>ref|NP_001069288.1| phospholipase A2, membrane associated [Bos taurus].
Length = 144
Score = 142 bits (357), Expect = 8e-34
Identities = 66/143 (46%), Positives = 85/143 (59%)
Frame = +3
Query: 45 LPLLCFLVAFAGVIPAQGGILNLNKMIKQVTGKVPFFSYWPYGCHCGIGGRGEPKDATDW 224
L LL ++AFA ++ + + +MIK TGK SY YGC+CG+ GRG PKDATD
Sbjct: 4 LLLLAVIMAFA-LLQVHAHLWDFARMIKHTTGKGALLSYSAYGCYCGVSGRGSPKDATDR 62
Query: 225 CCHAHDCCYSHLKGHGCRTHLDHYRYTFSQGTVQCSDKGSWCERELCACDKGVAFCMKRN 404
CC AHDCCY LK HGC T +Y + +G + C+D+G C R +C CDK A C RN
Sbjct: 63 CCWAHDCCYKKLKHHGCGTKFLNYNVSIRRGQITCADQGV-CRRIVCECDKKAALCFARN 121
Query: 405 LDSYKKHLRYYWRPHCKGQTPVC 473
+Y K L+YY C G+ P C
Sbjct: 122 QKTYNKKLQYYRNSLCTGRAPQC 144
>ref|NP_001095992.1| group IIF secretory phospholipase A2 [Bos taurus].
Length = 196
Score = 136 bits (343), Expect = 3e-32
Identities = 60/136 (44%), Positives = 87/136 (63%), Gaps = 3/136 (2%)
Frame = +3
Query: 75 AGVIPA-QGGILNLNKMIKQVTGKVPFFSYWPYGCHCGIGGRGEPKDATDWCCHAHDCCY 251
+ V+PA + +LNL M++ VTG+ S+ YGC+CG+GGRG P D DWCCHAHDCCY
Sbjct: 53 SSVLPAARSSLLNLKSMVETVTGRNAILSFVGYGCYCGLGGRGLPMDEVDWCCHAHDCCY 112
Query: 252 SHLKGHGCRTHLDHYRYTFSQGT-VQCSD-KGSWCERELCACDKGVAFCMKRNLDSYKKH 425
L GCRT++DHY YT T + CS+ + C+++ C CD+ V C+++ +Y++
Sbjct: 113 QKLFDLGCRTYVDHYDYTIENDTDIVCSELNQTECDKQTCECDRSVVLCLQK--QTYREE 170
Query: 426 LRYYWRPHCKGQTPVC 473
R Y +C+G TP C
Sbjct: 171 HRNYLNIYCQGPTPNC 186
>ref|NP_001179015.1| group IIE secretory phospholipase A2 [Bos taurus].
Length = 142
Score = 133 bits (335), Expect = 3e-31
Identities = 60/143 (41%), Positives = 84/143 (58%)
Frame = +3
Query: 45 LPLLCFLVAFAGVIPAQGGILNLNKMIKQVTGKVPFFSYWPYGCHCGIGGRGEPKDATDW 224
L LC L A AG G ++ MI+++TGK P Y YGC+CG+GG P D TDW
Sbjct: 7 LTFLCLLAALAG-----GNLVQFGVMIERMTGK-PALQYNDYGCYCGVGGSHWPVDKTDW 60
Query: 225 CCHAHDCCYSHLKGHGCRTHLDHYRYTFSQGTVQCSDKGSWCERELCACDKGVAFCMKRN 404
CCHAHDCCY L+ GC ++ Y ++ ++ ++ C+ + S C+R+ C CDK A C +RN
Sbjct: 61 CCHAHDCCYGRLEKLGCEPKMERYLFSATRHSIFCAGRTS-CQRQTCECDKKAALCFRRN 119
Query: 405 LDSYKKHLRYYWRPHCKGQTPVC 473
L +Y + +Y C G TP C
Sbjct: 120 LGTYNRKYAHYPNKLCTGPTPPC 142
Database: RefSeq49_BP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 17,681,374
Number of sequences in database: 33,088
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33088
Number of Hits to DB: 49,758,283
Number of extensions: 1418240
Number of successful extensions: 5467
Number of sequences better than 1.0e-05: 22
Number of HSP's gapped: 5441
Number of HSP's successfully gapped: 22
Length of query: 399
Length of database: 17,681,374
Length adjustment: 104
Effective length of query: 295
Effective length of database: 14,240,222
Effective search space: 4200865490
Effective search space used: 4200865490
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Animal-Genome cDNA 20110601C-013726
Search to RefSeqCP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-013726
(1198 letters)
Database: RefSeq49_CP.fasta
33,336 sequences; 18,874,504 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_544524.2| PREDICTED: similar to Group IID secretory phosp... 266 2e-71
Alignment gi|XP_535382.2| PREDICTED: similar to phospholipase A2, group V... 136 5e-32
Alignment gi|XP_544523.1| PREDICTED: similar to Group IIF secretory phosp... 131 1e-30
Alignment gi|XP_544525.2| PREDICTED: similar to Group IIE secretory phosp... 127 2e-29
Alignment gi|XP_544522.2| PREDICTED: similar to Group IIC secretory phosp... 121 1e-27
Alignment gi|XP_547117.2| PREDICTED: similar to Group X secretory phospho... 106 4e-23
Alignment gi|NP_001003320.1| phospholipase A2 preproprotein [Canis lupus ... 82 1e-15
Alignment gi|XP_852470.1| PREDICTED: similar to Otoconin 90 precursor (Oc... 72 1e-12
>ref|XP_544524.2| PREDICTED: similar to Group IID secretory phospholipase A2
precursor (Phosphatidylcholine 2-acylhydrolase GIID)
(GIID sPLA2) (PLA2IID) (sPLA(2)-IID) (Secretory-type
PLA, stroma-associated homolog) [Canis familiaris].
Length = 175
Score = 266 bits (681), Expect = 2e-71
Identities = 117/171 (68%), Positives = 132/171 (77%), Gaps = 14/171 (8%)
Frame = +3
Query: 3 FQQLPPLLC--AGTMELPLLCFLVAFA------------GVIPAQGGILNLNKMIKQVTG 140
FQQL C AGTMELPLLC L+ FA GVIP QGGI+NLNKMIKQVT
Sbjct: 5 FQQLLQPSCPPAGTMELPLLCTLLVFAAHVLSLLLDSLAGVIPTQGGIMNLNKMIKQVTR 64
Query: 141 KVPFFSYWPYGCHCGIGGRGEPKDATDWCCHAHDCCYSHLKGHGCRTHLDHYRYTFSQGT 320
K P FSYW YGCHCG GGRG+PKDATDWCC HDCCY HLK H CR H +HY YTFS G
Sbjct: 65 KTPIFSYWFYGCHCGPGGRGQPKDATDWCCQTHDCCYEHLKLHRCRIHTNHYDYTFSHGD 124
Query: 321 VQCSDKGSWCERELCACDKGVAFCMKRNLDSYKKHLRYYWRPHCKGQTPVC 473
+QCSDKG+WCE++LCACDK + C++RNLDSY++HLRYYWRPHC+GQTP+C
Sbjct: 125 IQCSDKGTWCEQQLCACDKEMVLCLQRNLDSYQRHLRYYWRPHCRGQTPMC 175
>ref|XP_535382.2| PREDICTED: similar to phospholipase A2, group V [Canis familiaris].
Length = 174
Score = 136 bits (342), Expect = 5e-32
Identities = 57/114 (50%), Positives = 75/114 (65%)
Frame = +3
Query: 96 GGILNLNKMIKQVTGKVPFFSYWPYGCHCGIGGRGEPKDATDWCCHAHDCCYSHLKGHGC 275
GG+L+L MI++VTGK +Y YGC+CG GGRG PKD TDWCC HD CY L+ GC
Sbjct: 56 GGLLDLKSMIEKVTGKSALTNYGFYGCYCGWGGRGTPKDGTDWCCWVHDRCYGRLEEKGC 115
Query: 276 RTHLDHYRYTFSQGTVQCSDKGSWCERELCACDKGVAFCMKRNLDSYKKHLRYY 437
Y+Y F+QG V C + G C+ +LC CD+ + +C+KRNL SY H +Y+
Sbjct: 116 HIRTQSYKYRFAQGLVTC-EYGPLCQMQLCTCDRKLVYCLKRNLRSYNPHYQYF 168
>ref|XP_544523.1| PREDICTED: similar to Group IIF secretory phospholipase A2
precursor (Phosphatidylcholine 2-acylhydrolase GIIF)
(GIIF sPLA2) (sPLA(2)-IIF) [Canis familiaris].
Length = 215
Score = 131 bits (330), Expect = 1e-30
Identities = 63/154 (40%), Positives = 91/154 (59%), Gaps = 5/154 (3%)
Frame = +3
Query: 27 CAGT-MELPLLCFLVAFAG-VIP-AQGGILNLNKMIKQVTGKVPFFSYWPYGCHCGIGGR 197
C+G+ + + L +V AG V+P A+ +LNL M++ +TG+ S+ YGC+CG+GG
Sbjct: 41 CSGSSLGMKKLFTMVVLAGSVLPVARSSLLNLKYMVEAITGRSAILSFVGYGCYCGLGGY 100
Query: 198 GEPKDATDWCCHAHDCCYSHLKGHGCRTHLDHYRYTFSQGT-VQCSD-KGSWCERELCAC 371
G P D DWCCHAHDCCY L GC ++DHY YT T + CS+ + C+++ C C
Sbjct: 101 GLPMDEVDWCCHAHDCCYQKLFDLGCHPYVDHYEYTIENNTSIVCSELNETECDKQTCEC 160
Query: 372 DKGVAFCMKRNLDSYKKHLRYYWRPHCKGQTPVC 473
DK V C++ Y + R Y +C+G TP C
Sbjct: 161 DKNVVLCLQN--QKYNEKHRNYLNIYCQGPTPNC 192
>ref|XP_544525.2| PREDICTED: similar to Group IIE secretory phospholipase A2
precursor (Phosphatidylcholine 2-acylhydrolase GIIE)
(GIIE sPLA2) (sPLA(2)-IIE) [Canis familiaris].
Length = 167
Score = 127 bits (319), Expect = 2e-29
Identities = 55/131 (41%), Positives = 79/131 (60%)
Frame = +3
Query: 81 VIPAQGGILNLNKMIKQVTGKVPFFSYWPYGCHCGIGGRGEPKDATDWCCHAHDCCYSHL 260
V PA G ++ MI+++TGK P Y YGC+CG+GG P D TDWCCHAHDCCY L
Sbjct: 39 VAPAGGNLVQFGVMIERMTGK-PALQYNDYGCYCGVGGSHWPVDPTDWCCHAHDCCYGRL 97
Query: 261 KGHGCRTHLDHYRYTFSQGTVQCSDKGSWCERELCACDKGVAFCMKRNLDSYKKHLRYYW 440
+ GC L+ Y ++ S+ ++ C+ K + C+R+ C CD+ A C + +L +Y ++ Y
Sbjct: 98 EKLGCEPKLERYLFSASRHSIFCAGKTA-CQRQTCECDRKAALCFRHHLGTYNRNFVRYP 156
Query: 441 RPHCKGQTPVC 473
C G TP C
Sbjct: 157 NKLCSGPTPPC 167
>ref|XP_544522.2| PREDICTED: similar to Group IIC secretory phospholipase A2
precursor (Phosphatidylcholine 2-acylhydrolase GIIC)
(GIIC sPLA2) (PLA2-8) (14 kDa phospholipase A2) [Canis
familiaris].
Length = 152
Score = 121 bits (304), Expect = 1e-27
Identities = 57/139 (41%), Positives = 79/139 (56%), Gaps = 9/139 (6%)
Frame = +3
Query: 63 LVAFAGVI--PAQGGILNLNKMIKQVTGKVPFFSYWPYGCHCGIGGRGEPKDATDWCCHA 236
LV FA + PA +M+K +TG+ FFSY+ YGC+CG+GG+G P D TD CC A
Sbjct: 7 LVVFASCLMSPAHSSFWQFQRMVKHITGRSAFFSYYGYGCYCGLGGKGTPMDDTDRCCLA 66
Query: 237 HDCCYSHLKGHGCRTHLDHYRYTFSQGTVQCS-----DKGSWCERELCACDKGVAFCMKR 401
HDCCY LK GC+ L+ Y++ + GTV C C C CDK A+C +
Sbjct: 67 HDCCYGKLKQLGCQPVLNGYQFHIANGTVVCKCPLGPSVSCLCGLRACECDKQSAYCFRA 126
Query: 402 NLDSYKKHLRYYW--RPHC 452
+L +Y+K+ + + RP C
Sbjct: 127 SLPTYEKNFKQLFSSRPRC 145
>ref|XP_547117.2| PREDICTED: similar to Group X secretory phospholipase A2 precursor
(Phosphatidylcholine 2-acylhydrolase GX) (GX sPLA2)
(sPLA2-X) [Canis familiaris].
Length = 212
Score = 106 bits (265), Expect = 4e-23
Identities = 46/125 (36%), Positives = 68/125 (54%)
Frame = +3
Query: 99 GILNLNKMIKQVTGKVPFFSYWPYGCHCGIGGRGEPKDATDWCCHAHDCCYSHLKGHGCR 278
G+L L + V + P SY YGC+CG+GG G+P+D DWCCH HDCCY + GCR
Sbjct: 90 GLLELAGTMNCVGTRSPL-SYISYGCYCGLGGYGQPRDTIDWCCHQHDCCYMRAEQAGCR 148
Query: 279 THLDHYRYTFSQGTVQCSDKGSWCERELCACDKGVAFCMKRNLDSYKKHLRYYWRPHCKG 458
++ Y + ++ C + C+ LC CDK +A+C+ + Y +Y R C+
Sbjct: 149 PKMERYPWQCVNQSIVCGPADNKCQELLCTCDKEIAYCLAQT--EYNLKYLFYPRFLCEK 206
Query: 459 QTPVC 473
+P C
Sbjct: 207 DSPTC 211
>ref|NP_001003320.1| phospholipase A2 preproprotein [Canis lupus familiaris].
Length = 146
Score = 82.0 bits (201), Expect = 1e-15
Identities = 50/139 (35%), Positives = 63/139 (45%), Gaps = 20/139 (14%)
Frame = +3
Query: 63 LVAFAGVIPAQGGIL-----NLNKMIK-QVTGKVPFFSYWPYGCHCGIGGRGEPKDATDW 224
L A V A+GGI MIK + P Y YGC+CG+GG G P D D
Sbjct: 6 LAALLTVAAAEGGISPRAVWQFRNMIKCTIPESDPLKDYNDYGCYCGLGGSGTPVDELDK 65
Query: 225 CCHAHDCCYSHLKG-HGCRTHLDH-----YRYTFSQGTVQCSDKGSWCERELCACDKGVA 386
CC HD CYS K C+ LD+ Y Y+ S + CS K C+ +C CD+ A
Sbjct: 66 CCQTHDHCYSEAKKLDSCKFLLDNPYTKIYSYSCSGSEITCSSKNKDCQAFICNCDRSAA 125
Query: 387 FCMK--------RNLDSYK 419
C +NLD+ K
Sbjct: 126 ICFSKAPYNKEHKNLDTKK 144
>ref|XP_852470.1| PREDICTED: similar to Otoconin 90 precursor (Oc90) (Phospholipase
A2 homolog) [Canis familiaris].
Length = 537
Score = 72.0 bits (175), Expect = 1e-12
Identities = 42/113 (37%), Positives = 57/113 (50%), Gaps = 5/113 (4%)
Frame = +3
Query: 168 YGCHCGIGGRGEPKDATDWCCHAHDCCYSHLKGHGCRT-HLDHYRYTFSQGTVQCSDKGS 344
YGC+CG G+GEP+DA D CC +H CC + GC + L GT +C + S
Sbjct: 384 YGCYCGQEGQGEPRDALDRCCFSHHCCVEQVTRLGCLSERLPGSLVECVDGTAKCVGR-S 442
Query: 345 WCERELCACDKGVAFCMKRNLDSYKKHLRYYWRPHCKGQTPVC*EE----PTA 491
C + LCACD+ A CM ++ L + C+G+ P C E PTA
Sbjct: 443 LCAQLLCACDQTAAECMAS--AAFNLSLGSAGKRACQGRRPSCGEHLHGAPTA 493
Score = 50.4 bits (119), Expect = 3e-06
Identities = 41/150 (27%), Positives = 56/150 (37%), Gaps = 4/150 (2%)
Frame = +3
Query: 123 IKQVTGKVPFFSYWPYGCHCGIGGRGEPKDATDWCCHAHDCCYSHLKGHGCRTHLDHYRY 302
+K V G P + YGC C G P D D CC H CY C D +
Sbjct: 130 MKCVAGLCPR-DFEDYGCACRFEMEGAPVDEADSCCFQHRRCYEEAAEKDCPQ--DPAKL 186
Query: 303 TFSQGTVQCS---DKGSWCERELCACDKGVAFCMKR-NLDSYKKHLRYYWRPHCKGQTPV 470
+ V S + G CE LC C+K C+ R +++S HL
Sbjct: 187 SIDVNCVSKSITCESGDPCEHLLCTCNKAAIECLARSSINSSLNHL-------------- 232
Query: 471 C*EEPTALCLTRPCPAPQSCTPSGLLNSPP 560
T+ CL +P P++ + L PP
Sbjct: 233 ----DTSFCLAQP---PETASTEELTTLPP 255
Database: RefSeq49_CP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,874,504
Number of sequences in database: 33,336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33336
Number of Hits to DB: 51,850,361
Number of extensions: 1460042
Number of successful extensions: 5328
Number of sequences better than 1.0e-05: 8
Number of HSP's gapped: 5287
Number of HSP's successfully gapped: 9
Length of query: 399
Length of database: 18,874,504
Length adjustment: 105
Effective length of query: 294
Effective length of database: 15,374,224
Effective search space: 4520021856
Effective search space used: 4520021856
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to RefSeqSP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-013726
(1198 letters)
Database: RefSeq49_SP.fasta
24,897 sequences; 11,343,932 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_003127715.1| PREDICTED: group IID secretory phospholipase... 362 e-100
Alignment gi|XP_003127710.1| PREDICTED: group IID secretory phospholipase... 362 e-100
Alignment gi|XP_003127714.1| PREDICTED: group IIF secretory phospholipase... 135 6e-32
Alignment gi|XP_003127711.1| PREDICTED: calcium-dependent phospholipase A... 129 4e-30
Alignment gi|XP_003127716.1| PREDICTED: calcium-dependent phospholipase A... 129 4e-30
Alignment gi|XP_003127720.1| PREDICTED: putative inactive group IIC secre... 89 6e-18
Alignment gi|NP_001004037.1| phospholipase A2, major isoenzyme precursor ... 78 9e-15
Alignment gi|XP_003360925.1| PREDICTED: otoconin-90-like [Sus scrofa]. 61 1e-09
Alignment gi|XP_003356230.1| PREDICTED: group IIF secretory phospholipase... 59 5e-09
Alignment gi|XP_001924242.3| PREDICTED: potassium voltage-gated channel s... 52 5e-07
>ref|XP_003127715.1| PREDICTED: group IID secretory phospholipase A2-like [Sus scrofa].
Length = 161
Score = 362 bits (928), Expect = e-100
Identities = 157/157 (100%), Positives = 157/157 (100%)
Frame = +3
Query: 3 FQQLPPLLCAGTMELPLLCFLVAFAGVIPAQGGILNLNKMIKQVTGKVPFFSYWPYGCHC 182
FQQLPPLLCAGTMELPLLCFLVAFAGVIPAQGGILNLNKMIKQVTGKVPFFSYWPYGCHC
Sbjct: 5 FQQLPPLLCAGTMELPLLCFLVAFAGVIPAQGGILNLNKMIKQVTGKVPFFSYWPYGCHC 64
Query: 183 GIGGRGEPKDATDWCCHAHDCCYSHLKGHGCRTHLDHYRYTFSQGTVQCSDKGSWCEREL 362
GIGGRGEPKDATDWCCHAHDCCYSHLKGHGCRTHLDHYRYTFSQGTVQCSDKGSWCEREL
Sbjct: 65 GIGGRGEPKDATDWCCHAHDCCYSHLKGHGCRTHLDHYRYTFSQGTVQCSDKGSWCEREL 124
Query: 363 CACDKGVAFCMKRNLDSYKKHLRYYWRPHCKGQTPVC 473
CACDKGVAFCMKRNLDSYKKHLRYYWRPHCKGQTPVC
Sbjct: 125 CACDKGVAFCMKRNLDSYKKHLRYYWRPHCKGQTPVC 161
>ref|XP_003127710.1| PREDICTED: group IID secretory phospholipase A2-like [Sus scrofa].
Length = 161
Score = 362 bits (928), Expect = e-100
Identities = 157/157 (100%), Positives = 157/157 (100%)
Frame = +3
Query: 3 FQQLPPLLCAGTMELPLLCFLVAFAGVIPAQGGILNLNKMIKQVTGKVPFFSYWPYGCHC 182
FQQLPPLLCAGTMELPLLCFLVAFAGVIPAQGGILNLNKMIKQVTGKVPFFSYWPYGCHC
Sbjct: 5 FQQLPPLLCAGTMELPLLCFLVAFAGVIPAQGGILNLNKMIKQVTGKVPFFSYWPYGCHC 64
Query: 183 GIGGRGEPKDATDWCCHAHDCCYSHLKGHGCRTHLDHYRYTFSQGTVQCSDKGSWCEREL 362
GIGGRGEPKDATDWCCHAHDCCYSHLKGHGCRTHLDHYRYTFSQGTVQCSDKGSWCEREL
Sbjct: 65 GIGGRGEPKDATDWCCHAHDCCYSHLKGHGCRTHLDHYRYTFSQGTVQCSDKGSWCEREL 124
Query: 363 CACDKGVAFCMKRNLDSYKKHLRYYWRPHCKGQTPVC 473
CACDKGVAFCMKRNLDSYKKHLRYYWRPHCKGQTPVC
Sbjct: 125 CACDKGVAFCMKRNLDSYKKHLRYYWRPHCKGQTPVC 161
>ref|XP_003127714.1| PREDICTED: group IIF secretory phospholipase A2-like [Sus scrofa].
Length = 204
Score = 135 bits (339), Expect = 6e-32
Identities = 66/176 (37%), Positives = 95/176 (53%), Gaps = 3/176 (1%)
Frame = +3
Query: 51 LLCFLVAFAGVIP-AQGGILNLNKMIKQVTGKVPFFSYWPYGCHCGIGGRGEPKDATDWC 227
LL + + V+P AQ +LNL M++ +TG+ S+ YGC+CG+GGRG P D DWC
Sbjct: 40 LLTVTLLASSVLPLAQSSLLNLKSMVEAITGRNAILSFVGYGCYCGLGGRGLPMDEVDWC 99
Query: 228 CHAHDCCYSHLKGHGCRTHLDHYRYTFSQGT-VQCSD-KGSWCERELCACDKGVAFCMKR 401
CHAHDCCY L C ++DHY YT T + CS + C+++ C CDK + C ++
Sbjct: 100 CHAHDCCYQKLFDLDCHPYVDHYDYTIENNTNLVCSQLNQTECDKQTCECDKSLVLCFQK 159
Query: 402 NLDSYKKHLRYYWRPHCKGQTPVC*EEPTALCLTRPCPAPQSCTPSGLLNSPPATP 569
+ Y++ R Y +C+G TP C + P P C+P + PP P
Sbjct: 160 QI--YREEHRNYLNIYCQGPTPNC-------SIYEPPPTAAGCSPGSPV--PPTPP 204
>ref|XP_003127711.1| PREDICTED: calcium-dependent phospholipase A2-like [Sus scrofa].
Length = 138
Score = 129 bits (323), Expect = 4e-30
Identities = 58/131 (44%), Positives = 81/131 (61%)
Frame = +3
Query: 45 LPLLCFLVAFAGVIPAQGGILNLNKMIKQVTGKVPFFSYWPYGCHCGIGGRGEPKDATDW 224
L L FL +P G +L+L+ MI++VTGK +Y YGC+CG GG+G PKD TDW
Sbjct: 5 LTLAWFLACSVPAVP--GSLLDLSTMIEKVTGKPALTNYGFYGCYCGWGGQGTPKDGTDW 62
Query: 225 CCHAHDCCYSHLKGHGCRTHLDHYRYTFSQGTVQCSDKGSWCERELCACDKGVAFCMKRN 404
CC HD CY+ L+ GC T Y+Y + G V C ++GS+C+ +LC CD+ +C+KRN
Sbjct: 63 CCWVHDYCYAQLEEKGCNTLTQSYKYRVAWGLVTC-ERGSYCQTQLCTCDQKFVYCLKRN 121
Query: 405 LDSYKKHLRYY 437
SY +Y+
Sbjct: 122 RRSYNPLYQYF 132
>ref|XP_003127716.1| PREDICTED: calcium-dependent phospholipase A2-like [Sus scrofa].
Length = 138
Score = 129 bits (323), Expect = 4e-30
Identities = 58/131 (44%), Positives = 81/131 (61%)
Frame = +3
Query: 45 LPLLCFLVAFAGVIPAQGGILNLNKMIKQVTGKVPFFSYWPYGCHCGIGGRGEPKDATDW 224
L L FL +P G +L+L+ MI++VTGK +Y YGC+CG GG+G PKD TDW
Sbjct: 5 LTLAWFLACSVPAVP--GSLLDLSTMIEKVTGKPALTNYGFYGCYCGWGGQGTPKDGTDW 62
Query: 225 CCHAHDCCYSHLKGHGCRTHLDHYRYTFSQGTVQCSDKGSWCERELCACDKGVAFCMKRN 404
CC HD CY+ L+ GC T Y+Y + G V C ++GS+C+ +LC CD+ +C+KRN
Sbjct: 63 CCWVHDYCYAQLEEKGCNTLTQSYKYRVAWGLVTC-ERGSYCQTQLCTCDQKFVYCLKRN 121
Query: 405 LDSYKKHLRYY 437
SY +Y+
Sbjct: 122 RRSYNPLYQYF 132
>ref|XP_003127720.1| PREDICTED: putative inactive group IIC secretory phospholipase
A2-like [Sus scrofa].
Length = 150
Score = 88.6 bits (218), Expect = 6e-18
Identities = 45/130 (34%), Positives = 65/130 (50%), Gaps = 5/130 (3%)
Frame = +3
Query: 87 PAQGGILNLNKMIKQVTGKVPFFSYWPYGCHCGIGGRGEPKDATDWCCHAHDCCYSHLKG 266
P Q +M+K +TG FSY+ YGC+CG+GG+G P D TD + Y LK
Sbjct: 11 PTQSSFWQFQRMVKHITGWSALFSYYGYGCYCGLGGKGTPVDDTD--SPSPPSGYERLKQ 68
Query: 267 HGCRTHLDHYRYTFSQGTVQCS-----DKGSWCERELCACDKGVAFCMKRNLDSYKKHLR 431
GC+ L+ Y++ TV C C C CDK A+C K NL +Y+K+ +
Sbjct: 69 LGCQPVLNGYQFHIVSRTVVCECALSPGASCLCGWRACECDKQYAYCFKENLPTYEKNFK 128
Query: 432 YYWRPHCKGQ 461
++ C G+
Sbjct: 129 HFSGRACCGR 138
>ref|NP_001004037.1| phospholipase A2, major isoenzyme precursor [Sus scrofa].
Length = 146
Score = 78.2 bits (191), Expect = 9e-15
Identities = 41/115 (35%), Positives = 56/115 (48%), Gaps = 15/115 (13%)
Frame = +3
Query: 120 MIK-QVTGKVPFFSYWPYGCHCGIGGRGEPKDATDWCCHAHDCCYSHLKG-HGCRTHLDH 293
MIK + G P + YGC+CG+GG G P D D CC HD CY K C+ +D+
Sbjct: 30 MIKCAIPGSHPLMDFNNYGCYCGLGGSGTPVDELDRCCETHDNCYRDAKNLDSCKFLVDN 89
Query: 294 -----YRYTFSQGTVQCSDKGSWCERELCACDKGVAFCMK--------RNLDSYK 419
Y Y+ S + C+ K + CE +C CD+ A C +NLD+ K
Sbjct: 90 PYTESYSYSCSNTEITCNSKNNACEAFICNCDRNAAICFSKAPYNKEHKNLDTKK 144
>ref|XP_003360925.1| PREDICTED: otoconin-90-like [Sus scrofa].
Length = 336
Score = 60.8 bits (146), Expect = 1e-09
Identities = 35/96 (36%), Positives = 49/96 (51%), Gaps = 1/96 (1%)
Frame = +3
Query: 111 LNKMIKQVTGKVPFFSYWPYGCHCGIGGRGEPKDATDWCCHAHDCCYSHLKGHGC-RTHL 287
L +M+ +T + P + YGC+CG G+GEP+DA D H CC ++ GC L
Sbjct: 233 LGEMLLCLTARCPE-EFEAYGCYCGQEGQGEPRDALDRXXXFHHCCLEQVRRLGCLLERL 291
Query: 288 DHYRYTFSQGTVQCSDKGSWCERELCACDKGVAFCM 395
GT +C + S C + LCACD+ A CM
Sbjct: 292 PPSPVMCVDGTPKCVGQ-SLCAKLLCACDQTAAECM 326
>ref|XP_003356230.1| PREDICTED: group IIF secretory phospholipase A2-like [Sus scrofa].
Length = 152
Score = 58.9 bits (141), Expect = 5e-09
Identities = 26/59 (44%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Frame = +3
Query: 51 LLCFLVAFAGVIP-AQGGILNLNKMIKQVTGKVPFFSYWPYGCHCGIGGRGEPKDATDW 224
LL + + V+P AQ +LNL M++ +TG+ S+ YGC+CG+GGRG P D DW
Sbjct: 40 LLTVTLLASSVLPLAQSSLLNLKSMVEAITGRNAILSFVGYGCYCGLGGRGLPMDEVDW 98
>ref|XP_001924242.3| PREDICTED: potassium voltage-gated channel subfamily KQT member
3-like [Sus scrofa].
Length = 1371
Score = 52.4 bits (124), Expect = 5e-07
Identities = 33/97 (34%), Positives = 42/97 (43%), Gaps = 3/97 (3%)
Frame = +3
Query: 123 IKQVTGKVPFFSYWPYGCHCGIGGRGEPKDATDWCCHAHDCCYSHLKGHGCRTHLDHYRY 302
+K V G P + YGC C G P DA+D CC H CY C D +
Sbjct: 363 MKCVAGLCPR-DFEDYGCACRFEMEGLPVDASDSCCFQHRRCYEEAADMDCLQ--DPSKL 419
Query: 303 TFSQGTVQCS---DKGSWCERELCACDKGVAFCMKRN 404
+ V S + G CER LC+CDK C+ R+
Sbjct: 420 STDVNCVSKSVTCESGDACERLLCSCDKAAIECLARS 456
Database: RefSeq49_SP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 11,343,932
Number of sequences in database: 24,897
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 24897
Number of Hits to DB: 32,152,673
Number of extensions: 916958
Number of successful extensions: 3500
Number of sequences better than 1.0e-05: 10
Number of HSP's gapped: 3484
Number of HSP's successfully gapped: 10
Length of query: 399
Length of database: 11,343,932
Length adjustment: 101
Effective length of query: 298
Effective length of database: 8,829,335
Effective search space: 2631141830
Effective search space used: 2631141830
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)
Search to RefSeqMP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-013726
(1198 letters)
Database: RefSeq49_MP.fasta
30,036 sequences; 15,617,559 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_035239.1| group IID secretory phospholipase A2 precursor ... 243 2e-64
Alignment gi|NP_001076000.1| phospholipase A2, membrane associated precur... 137 2e-32
Alignment gi|NP_036175.2| group IIF secretory phospholipase A2 [Mus muscu... 130 2e-30
Alignment gi|NP_036174.1| group IIE secretory phospholipase A2 precursor ... 130 3e-30
Alignment gi|NP_032894.2| group IIC secretory phospholipase A2 precursor ... 124 2e-28
Alignment gi|NP_035240.3| calcium-dependent phospholipase A2 precursor [M... 123 2e-28
Alignment gi|NP_001116426.1| calcium-dependent phospholipase A2 precursor... 123 2e-28
Alignment gi|NP_036117.1| group 10 secretory phospholipase A2 precursor [... 104 1e-22
Alignment gi|NP_035237.1| phospholipase A2 precursor [Mus musculus]. 79 7e-15
Alignment gi|NP_035083.1| otoconin-90 precursor [Mus musculus]. 74 2e-13
>ref|NP_035239.1| group IID secretory phospholipase A2 precursor [Mus musculus].
Length = 144
Score = 243 bits (621), Expect = 2e-64
Identities = 100/145 (68%), Positives = 119/145 (82%)
Frame = +3
Query: 39 MELPLLCFLVAFAGVIPAQGGILNLNKMIKQVTGKVPFFSYWPYGCHCGIGGRGEPKDAT 218
M L LLC L+ AG+ QGG+LNLNKM+ +TGK FFSYWPYGCHCG+GG+G+PKDAT
Sbjct: 1 MRLALLCGLL-LAGITATQGGLLNLNKMVTHMTGKKAFFSYWPYGCHCGLGGKGQPKDAT 59
Query: 219 DWCCHAHDCCYSHLKGHGCRTHLDHYRYTFSQGTVQCSDKGSWCERELCACDKGVAFCMK 398
DWCC HDCCY+HLK GC++ D+Y+Y+ SQGT+QCSD GSWCER+LCACDK VA C+K
Sbjct: 60 DWCCQKHDCCYAHLKIDGCKSLTDNYKYSISQGTIQCSDNGSWCERQLCACDKEVALCLK 119
Query: 399 RNLDSYKKHLRYYWRPHCKGQTPVC 473
+NLDSY K LRYYWRP CKG+TP C
Sbjct: 120 QNLDSYNKRLRYYWRPRCKGKTPAC 144
>ref|NP_001076000.1| phospholipase A2, membrane associated precursor [Mus musculus].
Length = 146
Score = 137 bits (345), Expect = 2e-32
Identities = 65/143 (45%), Positives = 82/143 (57%)
Frame = +3
Query: 45 LPLLCFLVAFAGVIPAQGGILNLNKMIKQVTGKVPFFSYWPYGCHCGIGGRGEPKDATDW 224
L L ++AF G I QG I +MI+ TGK SY YGCHCG+GG+G PKDATD
Sbjct: 5 LLLAASIMAF-GSIQVQGNIAQFGEMIRLKTGKRAELSYAFYGCHCGLGGKGSPKDATDR 63
Query: 225 CCHAHDCCYSHLKGHGCRTHLDHYRYTFSQGTVQCSDKGSWCERELCACDKGVAFCMKRN 404
CC HDCCY L+ GC T L Y+Y+ G + CS + C++ LC CDK A C RN
Sbjct: 64 CCVTHDCCYKSLEKSGCGTKLLKYKYSHQGGQITCSANQNSCQKRLCQCDKAAAECFARN 123
Query: 405 LDSYKKHLRYYWRPHCKGQTPVC 473
+Y ++Y CKG+ P C
Sbjct: 124 KKTYSLKYQFYPNMFCKGKKPKC 146
>ref|NP_036175.2| group IIF secretory phospholipase A2 [Mus musculus].
Length = 210
Score = 130 bits (328), Expect = 2e-30
Identities = 56/139 (40%), Positives = 84/139 (60%), Gaps = 2/139 (1%)
Frame = +3
Query: 63 LVAFAGVIPAQGGILNLNKMIKQVTGKVPFFSYWPYGCHCGIGGRGEPKDATDWCCHAHD 242
++A + V A +LNL M++ +T + S+ YGC+CG+GGRG P D DWCCHAHD
Sbjct: 51 VLAGSVVTTAHSSLLNLKSMVEAITHRNSILSFVGYGCYCGLGGRGHPMDEVDWCCHAHD 110
Query: 243 CCYSHLKGHGCRTHLDHYRYTFSQGT-VQCSD-KGSWCERELCACDKGVAFCMKRNLDSY 416
CCY L GCR ++DHY + GT + C++ + C+++ C CDK + C+K + Y
Sbjct: 111 CCYEKLFEQGCRPYVDHYDHRIENGTMIVCTELNETECDKQTCECDKSLTLCLKDH--PY 168
Query: 417 KKHLRYYWRPHCKGQTPVC 473
+ R Y+ +C+G TP C
Sbjct: 169 RNKYRGYFNVYCQGPTPNC 187
>ref|NP_036174.1| group IIE secretory phospholipase A2 precursor [Mus musculus].
Length = 142
Score = 130 bits (326), Expect = 3e-30
Identities = 59/143 (41%), Positives = 82/143 (57%)
Frame = +3
Query: 45 LPLLCFLVAFAGVIPAQGGILNLNKMIKQVTGKVPFFSYWPYGCHCGIGGRGEPKDATDW 224
L LC LV AG G ++ MI+++TGK P Y YGC+CG+GG P D TDW
Sbjct: 7 LACLCLLVPLAG-----GNLVQFGVMIERMTGK-PALQYNDYGCYCGVGGSHWPVDETDW 60
Query: 225 CCHAHDCCYSHLKGHGCRTHLDHYRYTFSQGTVQCSDKGSWCERELCACDKGVAFCMKRN 404
CCHAHDCCY L+ GC L+ Y ++ ++ + C+ + + C+R C CDK A C + N
Sbjct: 61 CCHAHDCCYGRLEKLGCDPKLEKYLFSITRDNIFCAGRTA-CQRHTCECDKRAALCFRHN 119
Query: 405 LDSYKKHLRYYWRPHCKGQTPVC 473
L++Y + +Y C G TP C
Sbjct: 120 LNTYNRKYAHYPNKLCTGPTPPC 142
>ref|NP_032894.2| group IIC secretory phospholipase A2 precursor [Mus musculus].
Length = 150
Score = 124 bits (310), Expect = 2e-28
Identities = 55/117 (47%), Positives = 74/117 (63%), Gaps = 5/117 (4%)
Frame = +3
Query: 117 KMIKQVTGKVPFFSYWPYGCHCGIGGRGEPKDATDWCCHAHDCCYSHLKGHGCRTHLDHY 296
+M+K VTG+ FFSY+ YGC+CG+GG+G P DATD CC AHDCCY LK +GC+ L+ Y
Sbjct: 27 RMVKHVTGRSAFFSYYGYGCYCGLGGKGLPVDATDRCCWAHDCCYHKLKEYGCQPILNAY 86
Query: 297 RYTFSQGTVQCS---DKGSWCERELCACDKGVAFCMKRNLDSYKKHLRYYW--RPHC 452
++T GTV C C ++ C CDK +C K NL +Y+K + + RP C
Sbjct: 87 QFTIVNGTVTCGCTVASSCLCGQKACECDKQSVYCFKENLATYEKAFKQLFPTRPQC 143
>ref|NP_035240.3| calcium-dependent phospholipase A2 precursor [Mus musculus].
Length = 137
Score = 123 bits (309), Expect = 2e-28
Identities = 58/131 (44%), Positives = 76/131 (58%)
Frame = +3
Query: 45 LPLLCFLVAFAGVIPAQGGILNLNKMIKQVTGKVPFFSYWPYGCHCGIGGRGEPKDATDW 224
L L FL +P GG+L L MI++VT K F +Y YGC+CG GGRG PKD TDW
Sbjct: 5 LTLAWFLACSVPAVP--GGLLELKSMIEKVTRKNAFKNYGFYGCYCGWGGRGTPKDGTDW 62
Query: 225 CCHAHDCCYSHLKGHGCRTHLDHYRYTFSQGTVQCSDKGSWCERELCACDKGVAFCMKRN 404
CC HD CY L+ C Y Y ++ G V C + S+C LCACD+ + +C++RN
Sbjct: 63 CCQMHDRCYGQLEEKDCAIRTQSYDYRYTNGLVIC-EHDSFCPMRLCACDRKLVYCLRRN 121
Query: 405 LDSYKKHLRYY 437
L +Y +YY
Sbjct: 122 LWTYNPLYQYY 132
>ref|NP_001116426.1| calcium-dependent phospholipase A2 precursor [Mus musculus].
Length = 137
Score = 123 bits (309), Expect = 2e-28
Identities = 58/131 (44%), Positives = 76/131 (58%)
Frame = +3
Query: 45 LPLLCFLVAFAGVIPAQGGILNLNKMIKQVTGKVPFFSYWPYGCHCGIGGRGEPKDATDW 224
L L FL +P GG+L L MI++VT K F +Y YGC+CG GGRG PKD TDW
Sbjct: 5 LTLAWFLACSVPAVP--GGLLELKSMIEKVTRKNAFKNYGFYGCYCGWGGRGTPKDGTDW 62
Query: 225 CCHAHDCCYSHLKGHGCRTHLDHYRYTFSQGTVQCSDKGSWCERELCACDKGVAFCMKRN 404
CC HD CY L+ C Y Y ++ G V C + S+C LCACD+ + +C++RN
Sbjct: 63 CCQMHDRCYGQLEEKDCAIRTQSYDYRYTNGLVIC-EHDSFCPMRLCACDRKLVYCLRRN 121
Query: 405 LDSYKKHLRYY 437
L +Y +YY
Sbjct: 122 LWTYNPLYQYY 132
>ref|NP_036117.1| group 10 secretory phospholipase A2 precursor [Mus musculus].
Length = 151
Score = 104 bits (260), Expect = 1e-22
Identities = 49/127 (38%), Positives = 70/127 (55%), Gaps = 2/127 (1%)
Frame = +3
Query: 99 GILNLNKMIKQVTGKVPFFSYWPYGCHCGIGGRGEPKDATDWCCHAHDCCYSHLKGHGCR 278
G+L L + V + P +Y YGC+CG+GG GEP+DA DWCC+ HDCCYS + GC
Sbjct: 29 GLLELAGTLDCVGPRSPM-AYMNYGCYCGLGGHGEPRDAIDWCCYHHDCCYSRAQDAGCS 87
Query: 279 THLDHYRYTFSQGTVQCSDKGSWCERELCACDKGVAFCMKRNLDSYKKHLRYYWRPH--C 452
LD Y + + C + C+ LC CD+ +A+C L + HL+Y + P C
Sbjct: 88 PKLDRYPWKCMDHHILCGPAENKCQELLCRCDEELAYC----LAGTEYHLKYLFFPSILC 143
Query: 453 KGQTPVC 473
+ +P C
Sbjct: 144 EKDSPKC 150
>ref|NP_035237.1| phospholipase A2 precursor [Mus musculus].
Length = 146
Score = 79.0 bits (193), Expect = 7e-15
Identities = 40/107 (37%), Positives = 53/107 (49%), Gaps = 7/107 (6%)
Frame = +3
Query: 102 ILNLNKMIK-QVTGKVPFFSYWPYGCHCGIGGRGEPKDATDWCCHAHDCCYSHLKG-HGC 275
+ MIK + G P Y YGC+CG+GG G P D D CC HD CYS K C
Sbjct: 24 VWQFRNMIKCTIPGSDPLKDYNNYGCYCGLGGWGTPVDDLDRCCQTHDHCYSQAKKLESC 83
Query: 276 RTHLDH-----YRYTFSQGTVQCSDKGSWCERELCACDKGVAFCMKR 401
+ +D+ Y Y+ S + CS K + CE +C CD+ A C +
Sbjct: 84 KFLIDNPYTNTYSYSCSGSEITCSAKNNKCEDFICNCDREAAICFSK 130
>ref|NP_035083.1| otoconin-90 precursor [Mus musculus].
Length = 485
Score = 73.9 bits (180), Expect = 2e-13
Identities = 46/130 (35%), Positives = 64/130 (49%), Gaps = 6/130 (4%)
Frame = +3
Query: 102 ILNLNKMIKQVTGKVPFFSYWPYGCHCGIGGRGEPKDATDWCCHAHDCCYSHLKGHGCRT 281
+L L +M+ +T P + YGC+CG GRGEP+D D CC +H CC ++ GC
Sbjct: 315 MLQLGEMLFCLTSHCPE-EFETYGCYCGREGRGEPRDTLDRCCLSHHCCLEQMRQVGCL- 372
Query: 282 HLDHYRYTFSQGTVQCSDK------GSWCERELCACDKGVAFCMKRNLDSYKKHLRYYWR 443
H R SQ +V C D S CE+ LCACD+ A CM + + L+
Sbjct: 373 ---HGRR--SQSSVVCEDHMAKCVGQSLCEKLLCACDQMAAECMASAF--FNQSLKSPDG 425
Query: 444 PHCKGQTPVC 473
C+G+ C
Sbjct: 426 AECQGEPVSC 435
Score = 51.2 bits (121), Expect = 2e-06
Identities = 41/144 (28%), Positives = 54/144 (37%), Gaps = 6/144 (4%)
Frame = +3
Query: 102 ILNLNKMIKQVTGKVPFFSYWPYGCHCGIGGRGEPKDATDWCCHAHDCCYSHLKGHGCRT 281
+L ++ VTG P + YGC C G P D +D CC H CY C
Sbjct: 75 LLQFVNSMRCVTGLCPR-DFEDYGCACRFEMEGMPVDESDICCFQHRRCYEEAVEMDCLQ 133
Query: 282 HLDHYRYTFSQGTVQCSDKGSWCERE------LCACDKGVAFCMKRNLDSYKKHLRYYWR 443
D + + V C++K CE E LC CDK C+ ++ L +
Sbjct: 134 --DPAKLS---ADVDCTNKQITCESEDPCERLLCTCDKAAVECLAQS--GINSSLNFLDA 186
Query: 444 PHCKGQTPVC*EEPTALCLTRPCP 515
C QTP A L R P
Sbjct: 187 SFCLPQTPETTSGKAATLLPRGIP 210
Database: RefSeq49_MP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 15,617,559
Number of sequences in database: 30,036
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 30036
Number of Hits to DB: 43,037,927
Number of extensions: 1194759
Number of successful extensions: 4331
Number of sequences better than 1.0e-05: 10
Number of HSP's gapped: 4315
Number of HSP's successfully gapped: 11
Length of query: 399
Length of database: 15,617,559
Length adjustment: 104
Effective length of query: 295
Effective length of database: 12,493,815
Effective search space: 3685675425
Effective search space used: 3685675425
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to RefSeqHP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-013726
(1198 letters)
Database: RefSeq49_HP.fasta
32,964 sequences; 18,297,164 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_036532.1| group IID secretory phospholipase A2 precursor ... 268 1e-71
Alignment gi|NP_001155201.1| phospholipase A2, membrane associated precur... 149 7e-36
Alignment gi|NP_001155200.1| phospholipase A2, membrane associated precur... 149 7e-36
Alignment gi|NP_001155199.1| phospholipase A2, membrane associated precur... 149 7e-36
Alignment gi|NP_000291.1| phospholipase A2, membrane associated precursor... 149 7e-36
Alignment gi|NP_073730.3| group IIF secretory phospholipase A2 [Homo sapi... 140 3e-33
Alignment gi|NP_000920.1| calcium-dependent phospholipase A2 precursor [H... 138 1e-32
Alignment gi|NP_055404.1| group IIE secretory phospholipase A2 precursor ... 125 6e-29
Alignment gi|NP_003552.1| group 10 secretory phospholipase A2 precursor [... 101 2e-21
Alignment gi|NP_000919.1| phospholipase A2 precursor [Homo sapiens]. 89 8e-18
>ref|NP_036532.1| group IID secretory phospholipase A2 precursor [Homo sapiens].
Length = 145
Score = 268 bits (684), Expect = 1e-71
Identities = 110/145 (75%), Positives = 124/145 (85%)
Frame = +3
Query: 39 MELPLLCFLVAFAGVIPAQGGILNLNKMIKQVTGKVPFFSYWPYGCHCGIGGRGEPKDAT 218
MEL LLC LV AGVIP QGGILNLNKM+KQVTGK+P SYWPYGCHCG+GGRG+PKDAT
Sbjct: 1 MELALLCGLVVMAGVIPIQGGILNLNKMVKQVTGKMPILSYWPYGCHCGLGGRGQPKDAT 60
Query: 219 DWCCHAHDCCYSHLKGHGCRTHLDHYRYTFSQGTVQCSDKGSWCERELCACDKGVAFCMK 398
DWCC HDCCY HLK GC + D+YRY FSQG + CSDKGSWCE++LCACDK VAFC+K
Sbjct: 61 DWCCQTHDCCYDHLKTQGCSIYKDYYRYNFSQGNIHCSDKGSWCEQQLCACDKEVAFCLK 120
Query: 399 RNLDSYKKHLRYYWRPHCKGQTPVC 473
RNLD+Y+K LR+YWRPHC+GQTP C
Sbjct: 121 RNLDTYQKRLRFYWRPHCRGQTPGC 145
>ref|NP_001155201.1| phospholipase A2, membrane associated precursor [Homo sapiens].
Length = 144
Score = 149 bits (375), Expect = 7e-36
Identities = 66/145 (45%), Positives = 87/145 (60%)
Frame = +3
Query: 39 MELPLLCFLVAFAGVIPAQGGILNLNKMIKQVTGKVPFFSYWPYGCHCGIGGRGEPKDAT 218
M+ LL ++ G++ A G ++N ++MIK TGK SY YGCHCG+GGRG PKDAT
Sbjct: 1 MKTLLLLAVIMIFGLLQAHGNLVNFHRMIKLTTGKEAALSYGFYGCHCGVGGRGSPKDAT 60
Query: 219 DWCCHAHDCCYSHLKGHGCRTHLDHYRYTFSQGTVQCSDKGSWCERELCACDKGVAFCMK 398
D CC HDCCY L+ GC T Y+++ S + C+ + S C +LC CDK A C
Sbjct: 61 DRCCVTHDCCYKRLEKRGCGTKFLSYKFSNSGSRITCAKQDS-CRSQLCECDKAAATCFA 119
Query: 399 RNLDSYKKHLRYYWRPHCKGQTPVC 473
RN +Y K +YY HC+G TP C
Sbjct: 120 RNKTTYNKKYQYYSNKHCRGSTPRC 144
>ref|NP_001155200.1| phospholipase A2, membrane associated precursor [Homo sapiens].
Length = 144
Score = 149 bits (375), Expect = 7e-36
Identities = 66/145 (45%), Positives = 87/145 (60%)
Frame = +3
Query: 39 MELPLLCFLVAFAGVIPAQGGILNLNKMIKQVTGKVPFFSYWPYGCHCGIGGRGEPKDAT 218
M+ LL ++ G++ A G ++N ++MIK TGK SY YGCHCG+GGRG PKDAT
Sbjct: 1 MKTLLLLAVIMIFGLLQAHGNLVNFHRMIKLTTGKEAALSYGFYGCHCGVGGRGSPKDAT 60
Query: 219 DWCCHAHDCCYSHLKGHGCRTHLDHYRYTFSQGTVQCSDKGSWCERELCACDKGVAFCMK 398
D CC HDCCY L+ GC T Y+++ S + C+ + S C +LC CDK A C
Sbjct: 61 DRCCVTHDCCYKRLEKRGCGTKFLSYKFSNSGSRITCAKQDS-CRSQLCECDKAAATCFA 119
Query: 399 RNLDSYKKHLRYYWRPHCKGQTPVC 473
RN +Y K +YY HC+G TP C
Sbjct: 120 RNKTTYNKKYQYYSNKHCRGSTPRC 144
>ref|NP_001155199.1| phospholipase A2, membrane associated precursor [Homo sapiens].
Length = 144
Score = 149 bits (375), Expect = 7e-36
Identities = 66/145 (45%), Positives = 87/145 (60%)
Frame = +3
Query: 39 MELPLLCFLVAFAGVIPAQGGILNLNKMIKQVTGKVPFFSYWPYGCHCGIGGRGEPKDAT 218
M+ LL ++ G++ A G ++N ++MIK TGK SY YGCHCG+GGRG PKDAT
Sbjct: 1 MKTLLLLAVIMIFGLLQAHGNLVNFHRMIKLTTGKEAALSYGFYGCHCGVGGRGSPKDAT 60
Query: 219 DWCCHAHDCCYSHLKGHGCRTHLDHYRYTFSQGTVQCSDKGSWCERELCACDKGVAFCMK 398
D CC HDCCY L+ GC T Y+++ S + C+ + S C +LC CDK A C
Sbjct: 61 DRCCVTHDCCYKRLEKRGCGTKFLSYKFSNSGSRITCAKQDS-CRSQLCECDKAAATCFA 119
Query: 399 RNLDSYKKHLRYYWRPHCKGQTPVC 473
RN +Y K +YY HC+G TP C
Sbjct: 120 RNKTTYNKKYQYYSNKHCRGSTPRC 144
>ref|NP_000291.1| phospholipase A2, membrane associated precursor [Homo sapiens].
Length = 144
Score = 149 bits (375), Expect = 7e-36
Identities = 66/145 (45%), Positives = 87/145 (60%)
Frame = +3
Query: 39 MELPLLCFLVAFAGVIPAQGGILNLNKMIKQVTGKVPFFSYWPYGCHCGIGGRGEPKDAT 218
M+ LL ++ G++ A G ++N ++MIK TGK SY YGCHCG+GGRG PKDAT
Sbjct: 1 MKTLLLLAVIMIFGLLQAHGNLVNFHRMIKLTTGKEAALSYGFYGCHCGVGGRGSPKDAT 60
Query: 219 DWCCHAHDCCYSHLKGHGCRTHLDHYRYTFSQGTVQCSDKGSWCERELCACDKGVAFCMK 398
D CC HDCCY L+ GC T Y+++ S + C+ + S C +LC CDK A C
Sbjct: 61 DRCCVTHDCCYKRLEKRGCGTKFLSYKFSNSGSRITCAKQDS-CRSQLCECDKAAATCFA 119
Query: 399 RNLDSYKKHLRYYWRPHCKGQTPVC 473
RN +Y K +YY HC+G TP C
Sbjct: 120 RNKTTYNKKYQYYSNKHCRGSTPRC 144
>ref|NP_073730.3| group IIF secretory phospholipase A2 [Homo sapiens].
Length = 211
Score = 140 bits (352), Expect = 3e-33
Identities = 65/162 (40%), Positives = 92/162 (56%), Gaps = 2/162 (1%)
Frame = +3
Query: 90 AQGGILNLNKMIKQVTGKVPFFSYWPYGCHCGIGGRGEPKDATDWCCHAHDCCYSHLKGH 269
A G +LNL M++ VTG+ S+ YGC+CG+GGRG+PKD DWCCHAHDCCY L
Sbjct: 61 AHGSLLNLKAMVEAVTGRSAILSFVGYGCYCGLGGRGQPKDEVDWCCHAHDCCYQELFDQ 120
Query: 270 GCRTHLDHYRYTFSQGT-VQCSD-KGSWCERELCACDKGVAFCMKRNLDSYKKHLRYYWR 443
GC ++DHY +T T + CSD + C+++ C CDK + C+ +Y++ R +
Sbjct: 121 GCHPYVDHYDHTIENNTEIVCSDLNKTECDKQTCMCDKNMVLCLMN--QTYREEYRGFLN 178
Query: 444 PHCKGQTPVC*EEPTALCLTRPCPAPQSCTPSGLLNSPPATP 569
+C+G TP C + P P+ T S +PPA P
Sbjct: 179 VYCQGPTPNC---------SIYEPPPEEVTCSHQSPAPPAPP 211
>ref|NP_000920.1| calcium-dependent phospholipase A2 precursor [Homo sapiens].
Length = 138
Score = 138 bits (347), Expect = 1e-32
Identities = 64/131 (48%), Positives = 81/131 (61%)
Frame = +3
Query: 45 LPLLCFLVAFAGVIPAQGGILNLNKMIKQVTGKVPFFSYWPYGCHCGIGGRGEPKDATDW 224
LPL FL V QGG+L+L MI++VTGK +Y YGC+CG GGRG PKD TDW
Sbjct: 5 LPLAWFLAC--SVPAVQGGLLDLKSMIEKVTGKNALTNYGFYGCYCGWGGRGTPKDGTDW 62
Query: 225 CCHAHDCCYSHLKGHGCRTHLDHYRYTFSQGTVQCSDKGSWCERELCACDKGVAFCMKRN 404
CC AHD CY L+ GC Y+Y F+ G V C + G +C LCACD+ + +C+KRN
Sbjct: 63 CCWAHDHCYGRLEEKGCNIRTQSYKYRFAWGVVTC-EPGPFCHVNLCACDRKLVYCLKRN 121
Query: 405 LDSYKKHLRYY 437
L SY +Y+
Sbjct: 122 LRSYNPQYQYF 132
>ref|NP_055404.1| group IIE secretory phospholipase A2 precursor [Homo sapiens].
Length = 142
Score = 125 bits (315), Expect = 6e-29
Identities = 60/143 (41%), Positives = 80/143 (55%)
Frame = +3
Query: 45 LPLLCFLVAFAGVIPAQGGILNLNKMIKQVTGKVPFFSYWPYGCHCGIGGRGEPKDATDW 224
L LC LVA G ++ MI+++TGK Y YGC+CGIGG P D TDW
Sbjct: 7 LVFLCLLVALV-----TGNLVQFGVMIEKMTGKSAL-QYNDYGCYCGIGGSHWPVDQTDW 60
Query: 225 CCHAHDCCYSHLKGHGCRTHLDHYRYTFSQGTVQCSDKGSWCERELCACDKGVAFCMKRN 404
CCHAHDCCY L+ GC L+ Y ++ S+ + C+ + + C+R C CDK A C +RN
Sbjct: 61 CCHAHDCCYGRLEKLGCEPKLEKYLFSVSERGIFCAGR-TTCQRLTCECDKRAALCFRRN 119
Query: 405 LDSYKKHLRYYWRPHCKGQTPVC 473
L +Y + +Y C G TP C
Sbjct: 120 LGTYNRKYAHYPNKLCTGPTPPC 142
>ref|NP_003552.1| group 10 secretory phospholipase A2 precursor [Homo sapiens].
Length = 165
Score = 101 bits (251), Expect = 2e-21
Identities = 46/127 (36%), Positives = 69/127 (54%), Gaps = 2/127 (1%)
Frame = +3
Query: 99 GILNLNKMIKQVTGKVPFFSYWPYGCHCGIGGRGEPKDATDWCCHAHDCCYSHLKGHGCR 278
GIL L + V + P +Y YGC CG+GG G+P+DA DWCCH HDCCY+ + GC
Sbjct: 43 GILELAGTVGCVGPRTPI-AYMKYGCFCGLGGHGQPRDAIDWCCHGHDCCYTRAEEAGCS 101
Query: 279 THLDHYRYTFSQGTVQCSDKGSWCERELCACDKGVAFCMKRNLDSYKKHLRYYWRPH--C 452
+ Y + +V C + C+ LC CD+ +A C+ + + +L+Y + P C
Sbjct: 102 PKTERYSWQCVNQSVLCGPAENKCQELLCKCDQEIANCLAQT----EYNLKYLFYPQFLC 157
Query: 453 KGQTPVC 473
+ +P C
Sbjct: 158 EPDSPKC 164
>ref|NP_000919.1| phospholipase A2 precursor [Homo sapiens].
Length = 148
Score = 89.0 bits (219), Expect = 8e-18
Identities = 52/138 (37%), Positives = 65/138 (47%), Gaps = 15/138 (10%)
Frame = +3
Query: 51 LLCFLVAFAGVIPAQGGILNLNKMIKQVT-GKVPFFSYWPYGCHCGIGGRGEPKDATDWC 227
LL A +G+ P + KMIK V G PF Y YGC+CG+GG G P D D C
Sbjct: 9 LLTVAAADSGISPR--AVWQFRKMIKCVIPGSDPFLEYNNYGCYCGLGGSGTPVDELDKC 66
Query: 228 CHAHDCCYSHLKG-HGCRTHLDH-----YRYTFSQGTVQCSDKGSWCERELCACDKGVAF 389
C HD CY K C+ LD+ Y Y+ S + CS K CE +C CD+ A
Sbjct: 67 CQTHDNCYDQAKKLDSCKFLLDNPYTHTYSYSCSGSAITCSSKNKECEAFICNCDRNAAI 126
Query: 390 CMK--------RNLDSYK 419
C +NLD+ K
Sbjct: 127 CFSKAPYNKAHKNLDTKK 144
Database: RefSeq49_HP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,297,164
Number of sequences in database: 32,964
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 32964
Number of Hits to DB: 50,980,022
Number of extensions: 1436561
Number of successful extensions: 5179
Number of sequences better than 1.0e-05: 13
Number of HSP's gapped: 5160
Number of HSP's successfully gapped: 14
Length of query: 399
Length of database: 18,297,164
Length adjustment: 105
Effective length of query: 294
Effective length of database: 14,835,944
Effective search space: 4361767536
Effective search space used: 4361767536
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to Sscrofa10_2
BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-013726
(1198 letters)
Database: Sscrofa_10.2.fasta
4582 sequences; 2,808,509,378 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Sscrofa_Chr06 1475 0.0
>Sscrofa_Chr06
|| Length = 157765593
Score = 1475 bits (744), Expect = 0.0
Identities = 841/872 (96%), Gaps = 25/872 (2%)
Strand = Plus / Minus
Query: 331 ctgacaaggggagctggtgtgagcgagagctgtgcgcctgtgacaagggggtggctttct 390
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72581350 ctgacaaggggagctggtgtgagcgagagctgtgcgcctgtgacaagggggtggctttct 72581291
Query: 391 gcatgaagcggaacctggacagctacaagaagcacctgcgttactactggcggccgcact 450
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72581290 gcatgaagcggaacctggacagctacaagaagcacctgcgttactactggcggccgcact 72581231
Query: 451 gcaagggccagaccccagtgtgctaggaggagcccacagcgctgtgcctcacccgtccct 510
||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 72581230 gcaagggccagaccccagtgtgctaggaggagccc-----------cctcacccgtccct 72581182
Query: 511 gccctgccccccaatcttgcactccttcaggactgctgaattctcctcccgcaacccccc 570
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72581181 gccctgcccccccatcttgcactccttcaggactgctgaattctcctcccgcaacccccc 72581122
Query: 571 aaaggatctaatcctcaaaccagcctggctcttttaaaacactctaagaagagggagggt 630
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72581121 aaaggatctaatcctcaaaccagcctggctcttttaaaacactctaagaagagggagggt 72581062
Query: 631 cttggcttactcccatctctgagatcccacagcactttaggaatgggtctgccacttgcc 690
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72581061 cttggcttactcccatctctgagatcccacagcactttaggaatgggtctgccacttgcc 72581002
Query: 691 aaactctcccttgagtggcatgtaattagccagactgctctggcctcctccgaccagact 750
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72581001 aagctctcccttgagtggcatgtaattagccagactgctctggcctcctccgaccagact 72580942
Query: 751 ggagctcccagaggatggagaccgcatcagtctcatcttcatttcctctgctcctccatg 810
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 72580941 ggagctcccagaggatggaggccgcatcagtctcatcttcatttcctctgctcctccatg 72580882
Query: 811 taccaggtgctcaagcaatgcttttggaccagaggagcccataatggagagatggaagtg 870
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72580881 taccaggtgctcaagcaatgcttttggaccagaggagcccataatggagagatggaagtg 72580822
Query: 871 gtggcaggtggtattggtgccctactcagttctcctcctggcccaggtccccaa-cccca 929
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 72580821 gtggcaggtggtattggtgccctactcagttctcctcctggcccaggtccccaaccccca 72580762
Query: 930 gctaagccaggtgtttgctgccaagtgctcacaactgccaccttctcttgaggattgatt 989
||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 72580761 gctaagccaggtgtttgctgccaag----------tgccaccttctcttgaggattgatt 72580712
Query: 990 gcccttggctgttgggagctaccatgctcatcgcccaccccatgccacccacccacctct 1049
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72580711 gcccttggctgttgggagctaccatgctcatcgcccaccccatgccacccacccacctct 72580652
Query: 1050 aaccaatgagtagggagaatagtaccacagagggaattatt-acctccctcttcctcttt 1108
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 72580651 aaccaatgagtagggagaatagtaccacagagggaattattaacctccctcttcctcttt 72580592
Query: 1109 cagga-catctgggtggtacactgcatgccccagagctccttgtangatcgagctagacg 1167
||||| ||||||||||||||||||||||||||||||||||||||| ||||| ||||||||
Sbjct: 72580591 caggaccatctgggtggtacactgcatgccccagagctccttgtaggatcgggctagacg 72580532
Query: 1168 tcttgctttgt-cactggcctagcctgttttc 1198
||||||||||| ||||||| ||||||||||||
Sbjct: 72580531 tcttgctttgtccactggcatagcctgttttc 72580500
Score = 293 bits (148), Expect = 1e-76
Identities = 148/148 (100%)
Strand = Plus / Minus
Query: 78 ggtgtgattccagcccagggtgggatcctgaacctgaacaagatgatcaaacaagtgacc 137
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72583606 ggtgtgattccagcccagggtgggatcctgaacctgaacaagatgatcaaacaagtgacc 72583547
Query: 138 gggaaggtgcccttcttctcctattggccctacggctgtcactgtggaatcggtggcaga 197
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72583546 gggaaggtgcccttcttctcctattggccctacggctgtcactgtggaatcggtggcaga 72583487
Query: 198 ggtgaacccaaagatgccacagactggt 225
||||||||||||||||||||||||||||
Sbjct: 72583486 ggtgaacccaaagatgccacagactggt 72583459
Score = 214 bits (108), Expect = 8e-53
Identities = 108/108 (100%)
Strand = Plus / Minus
Query: 223 ggtgctgccacgcccacgactgctgctacagtcacctgaagggccatggctgccgcaccc 282
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72582792 ggtgctgccacgcccacgactgctgctacagtcacctgaagggccatggctgccgcaccc 72582733
Query: 283 acttggaccactacagatacaccttttcccaggggaccgtccagtgct 330
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72582732 acttggaccactacagatacaccttttcccaggggaccgtccagtgct 72582685
Score = 157 bits (79), Expect = 2e-35
Identities = 79/79 (100%)
Strand = Plus / Minus
Query: 2 cttccagcagctgcctccactgctctgtgctgggaccatggaacttcccctgctgtgctt 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72587047 cttccagcagctgcctccactgctctgtgctgggaccatggaacttcccctgctgtgctt 72586988
Query: 62 cttggtggcatttgctggt 80
|||||||||||||||||||
Sbjct: 72586987 cttggtggcatttgctggt 72586969
Database: Sscrofa_10.2.fasta
Posted date: Nov 16, 2011 10:34 AM
Number of letters in database: 2,808,509,378
Number of sequences in database: 4582
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4582
Number of Hits to DB: 35,778,059
Number of extensions: 271
Number of successful extensions: 271
Number of sequences better than 1.0e-05: 1
Number of HSP's gapped: 268
Number of HSP's successfully gapped: 6
Length of query: 1198
Length of database: 2,808,509,378
Length adjustment: 21
Effective length of query: 1177
Effective length of database: 2,808,413,156
Effective search space: 3305502284612
Effective search space used: 3305502284612
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 18 (36.2 bits)
S2: 30 (60.0 bits)