BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-013843
         (926 letters)

Database: RefSeq49_BP.fasta 
           33,088 sequences; 17,681,374 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|XP_002687024.1| PREDICTED: WD repeat domain 86 [Bos taurus].      422   e-118
Alignment   gi|NP_001178268.1| WD repeat-containing protein 86 [Bos taurus].     421   e-118
Alignment   gi|NP_001157418.1| WD repeat-containing protein 38 [Bos taurus].     136   2e-32
Alignment   gi|NP_001069717.1| F-box/WD repeat-containing protein 7 [Bos ta...   112   6e-25
Alignment   gi|NP_001178407.1| transcription initiation factor TFIID subuni...   108   5e-24
Alignment   gi|XP_002698507.1| PREDICTED: TAF5 RNA polymerase II, TATA box ...   108   5e-24
Alignment   gi|NP_001098945.1| WD repeat-containing protein 5 [Bos taurus].      101   1e-21
Alignment   gi|NP_777088.1| platelet-activating factor acetylhydrolase IB s...   101   1e-21
Alignment   gi|XP_002696296.1| PREDICTED: F-box and WD repeat domain contai...    97   2e-20
Alignment   gi|XP_612428.5| PREDICTED: F-box and WD repeat domain containin...    97   2e-20

>ref|XP_002687024.1| PREDICTED: WD repeat domain 86 [Bos taurus].
          Length = 507

 Score =  422 bits (1086), Expect = e-118
 Identities = 202/220 (91%), Positives = 208/220 (94%)
 Frame = +2

Query: 266 MGGGGSALRVCADHRGGINWLSLSPDGQRLLTGSEDGTARLWSTADGQCCALLQGHESYV 445
           MGGGGSALRVCADHRGGINWLSLSPDGQRLLTGSEDGTARLWSTADG CCALLQGHESYV
Sbjct: 1   MGGGGSALRVCADHRGGINWLSLSPDGQRLLTGSEDGTARLWSTADGTCCALLQGHESYV 60

Query: 446 TFCQLEDEAAFTCSADCTIRKWDVLTGQCLQVFRGHTSIVNRILVTNNQLFSSSYDRTAR 625
           TFCQLEDEAAFTCSADCTIRKWDVLTGQCLQVFRGHTSIVNRILV +NQLFSSSYDRTAR
Sbjct: 61  TFCQLEDEAAFTCSADCTIRKWDVLTGQCLQVFRGHTSIVNRILVADNQLFSSSYDRTAR 120

Query: 626 AWSVDKGQVSREFRGHRNCVLTLAYSAPWDLPGAPCVEEAVAGGLLVTGSTDGTAKVWQV 805
           AWSVD+GQV+REFRGH NCVLTLAY+      GAPC+EEAVAGGLLVTGSTD TAKVWQV
Sbjct: 121 AWSVDRGQVAREFRGHCNCVLTLAYA------GAPCMEEAVAGGLLVTGSTDATAKVWQV 174

Query: 806 ASGCCHQTLRGHTGAVLCLVLDTPGHTAFTGSNDATIRAW 925
           ASGCCHQTLRGHTGAVLCLVLD PGHTAFTGS DAT+RAW
Sbjct: 175 ASGCCHQTLRGHTGAVLCLVLDAPGHTAFTGSTDATVRAW 214



 Score = 66.6 bits (161), Expect = 3e-11
 Identities = 35/76 (46%), Positives = 44/76 (57%), Gaps = 2/76 (2%)
 Frame = +2

Query: 344 GQRLLTGSEDGTARLWSTADGQCCALLQGHESYVTFCQLE--DEAAFTCSADCTIRKWDV 517
           G  L+TGS D TA++W  A G C   L+GH   V    L+     AFT S D T+R WD+
Sbjct: 157 GGLLVTGSTDATAKVWQVASGCCHQTLRGHTGAVLCLVLDAPGHTAFTGSTDATVRAWDI 216

Query: 518 LTGQCLQVFRGHTSIV 565
           L+GQ L+VFR H   V
Sbjct: 217 LSGQQLRVFREHQGSV 232



 Score = 60.1 bits (144), Expect = 3e-09
 Identities = 35/111 (31%), Positives = 47/111 (42%)
 Frame = +2

Query: 593 LFSSSYDRTARAWSVDKGQVSREFRGHRNCVLTLAYSAPWDLPGAPCVEEAVAGGLLVTG 772
           L + S DRT + W  D G+  R F  HR+ V  L Y A                G L TG
Sbjct: 378 LKAGSADRTVKCWLADTGERVRTFTAHRHSVSALKYHA----------------GTLFTG 421

Query: 773 STDGTAKVWQVASGCCHQTLRGHTGAVLCLVLDTPGHTAFTGSNDATIRAW 925
           S D  A+ +   SG   +  RGH   + C  +   G   +T S+D  +R W
Sbjct: 422 SGDARARAFDAQSGALRRVFRGHAFVINC--IQVHGQVLYTASHDGALRLW 470



 Score = 56.6 bits (135), Expect = 3e-08
 Identities = 37/129 (28%), Positives = 51/129 (39%), Gaps = 10/129 (7%)
 Frame = +2

Query: 353 LLTGSEDGTARLWSTADGQCCALLQGHESYVTFCQLEDEAAFTCSADCTIRKWDVLTGQC 532
           L  GS D T + W    G+       H   V+  +      FT S D   R +D  +G  
Sbjct: 378 LKAGSADRTVKCWLADTGERVRTFTAHRHSVSALKYHAGTLFTGSGDARARAFDAQSGAL 437

Query: 533 LQVFRGHTSIVNRILVTNNQLFSSSYDRTARAWSV----------DKGQVSREFRGHRNC 682
            +VFRGH  ++N I V    L+++S+D   R W V           K  +SR F     C
Sbjct: 438 RRVFRGHAFVINCIQVHGQVLYTASHDGALRLWDVRGLPPPRAAAPKRSLSRLFSNKVGC 497

Query: 683 VLTLAYSAP 709
               A   P
Sbjct: 498 AAAAAPLQP 506



 Score = 51.2 bits (121), Expect = 1e-06
 Identities = 33/107 (30%), Positives = 49/107 (45%)
 Frame = +2

Query: 485 SADCTIRKWDVLTGQCLQVFRGHTSIVNRILVTNNQLFSSSYDRTARAWSVDKGQVSREF 664
           SAD T++ W   TG+ ++ F  H   V+ +      LF+ S D  ARA+    G + R F
Sbjct: 382 SADRTVKCWLADTGERVRTFTAHRHSVSALKYHAGTLFTGSGDARARAFDAQSGALRRVF 441

Query: 665 RGHRNCVLTLAYSAPWDLPGAPCVEEAVAGGLLVTGSTDGTAKVWQV 805
           RGH   +               C++  V G +L T S DG  ++W V
Sbjct: 442 RGHAFVI--------------NCIQ--VHGQVLYTASHDGALRLWDV 472


>ref|NP_001178268.1| WD repeat-containing protein 86 [Bos taurus].
          Length = 371

 Score =  421 bits (1081), Expect = e-118
 Identities = 202/220 (91%), Positives = 207/220 (94%)
 Frame = +2

Query: 266 MGGGGSALRVCADHRGGINWLSLSPDGQRLLTGSEDGTARLWSTADGQCCALLQGHESYV 445
           MGGGGSALRVCADHRGGINWLSLSPDGQRLLTGSEDGTARLWSTADG CCALLQGHESYV
Sbjct: 1   MGGGGSALRVCADHRGGINWLSLSPDGQRLLTGSEDGTARLWSTADGTCCALLQGHESYV 60

Query: 446 TFCQLEDEAAFTCSADCTIRKWDVLTGQCLQVFRGHTSIVNRILVTNNQLFSSSYDRTAR 625
           TFCQLEDEAAFTCSADCTIRKWDVLTGQCLQVFRGHTSIVNRILV +NQLFSSSYDRTAR
Sbjct: 61  TFCQLEDEAAFTCSADCTIRKWDVLTGQCLQVFRGHTSIVNRILVADNQLFSSSYDRTAR 120

Query: 626 AWSVDKGQVSREFRGHRNCVLTLAYSAPWDLPGAPCVEEAVAGGLLVTGSTDGTAKVWQV 805
           AWSVD+GQV+REFRGH NCVLTLAY+      GAPCVEEAVAGGLLVTGSTD TAKVWQV
Sbjct: 121 AWSVDRGQVAREFRGHCNCVLTLAYA------GAPCVEEAVAGGLLVTGSTDATAKVWQV 174

Query: 806 ASGCCHQTLRGHTGAVLCLVLDTPGHTAFTGSNDATIRAW 925
           ASGCCHQTLRGHTGAVLCLVLD PG TAFTGS DAT+RAW
Sbjct: 175 ASGCCHQTLRGHTGAVLCLVLDAPGRTAFTGSTDATVRAW 214



 Score =  124 bits (311), Expect = 1e-28
 Identities = 71/196 (36%), Positives = 95/196 (48%), Gaps = 2/196 (1%)
 Frame = +2

Query: 344 GQRLLTGSEDGTARLWSTADGQCCALLQGHESYVTFCQLE--DEAAFTCSADCTIRKWDV 517
           G  L+TGS D TA++W  A G C   L+GH   V    L+     AFT S D T+R WD+
Sbjct: 157 GGLLVTGSTDATAKVWQVASGCCHQTLRGHTGAVLCLVLDAPGRTAFTGSTDATVRAWDI 216

Query: 518 LTGQCLQVFRGHTSIVNRILVTNNQLFSSSYDRTARAWSVDKGQVSREFRGHRNCVLTLA 697
           L+GQ L+VFR H   V  + + N  ++S S DRT + W  D G+  R F  HR+ V  L 
Sbjct: 217 LSGQQLRVFREHQGSVICLELVNRHVYSGSADRTVKCWLADTGERVRTFTAHRHSVSALK 276

Query: 698 YSAPWDLPGAPCVEEAVAGGLLVTGSTDGTAKVWQVASGCCHQTLRGHTGAVLCLVLDTP 877
           Y A                G L TGS D  A+ +   SG   +  RGH   + C  +   
Sbjct: 277 YHA----------------GTLFTGSGDARARAFDAQSGALRRVFRGHAFVINC--IQVH 318

Query: 878 GHTAFTGSNDATIRAW 925
           G   +T S+D  +R W
Sbjct: 319 GQVLYTASHDGALRLW 334



 Score = 80.5 bits (197), Expect = 2e-15
 Identities = 51/170 (30%), Positives = 74/170 (43%), Gaps = 3/170 (1%)
 Frame = +2

Query: 305 HRGGINWLSLSPDGQRLLTGSEDGTARLWSTADGQCCALLQGHESYVTFCQLEDEAAFTC 484
           H G +  L L   G+   TGS D T R W    GQ   + + H+  V   +L +   ++ 
Sbjct: 186 HTGAVLCLVLDAPGRTAFTGSTDATVRAWDILSGQQLRVFREHQGSVICLELVNRHVYSG 245

Query: 485 SADCTIRKWDVLTGQCLQVFRGHTSIVNRILVTNNQLFSSSYDRTARAWSVDKGQVSREF 664
           SAD T++ W   TG+ ++ F  H   V+ +      LF+ S D  ARA+    G + R F
Sbjct: 246 SADRTVKCWLADTGERVRTFTAHRHSVSALKYHAGTLFTGSGDARARAFDAQSGALRRVF 305

Query: 665 RGHR---NCVLTLAYSAPWDLPGAPCVEEAVAGGLLVTGSTDGTAKVWQV 805
           RGH    NC+                    V G +L T S DG  ++W V
Sbjct: 306 RGHAFVINCI-------------------QVHGQVLYTASHDGALRLWDV 336


>ref|NP_001157418.1| WD repeat-containing protein 38 [Bos taurus].
          Length = 296

 Score =  136 bits (343), Expect = 2e-32
 Identities = 84/232 (36%), Positives = 114/232 (49%), Gaps = 7/232 (3%)
 Frame = +2

Query: 251 RPTSRMGGGGSALRVCADHRGGINWLSLSPDGQRLLTGSEDGTARLWSTADGQCCALLQG 430
           RP  ++  G   ++    HRG +N  + SPDGQRLLT SEDG    W T  G+    L+G
Sbjct: 4   RPRGKLAVG--RVKFFGRHRGEVNSSAFSPDGQRLLTASEDGCVYGWETQSGRLLWRLRG 61

Query: 431 HESYVTFCQLEDEAAFTCSADC--TIRKWDVLTGQCLQVFRGHTSIVNRILVTNN--QLF 598
           H+  V FC+   +     S  C  TIR WD    +CLQV +GH   V  +  +++  QL 
Sbjct: 62  HKGPVRFCRFSPDGRLFASTSCDRTIRLWDATDAKCLQVLKGHQRSVETVSFSHDSKQLA 121

Query: 599 SSSYDRTARAWSVDKGQVSREFRGHRNCVLTLAYSAPWDLPGAPCVEEAVAGGLLVTGST 778
           S  +D+    W V  GQV R F GHR+ V +  ++     P + C         L TGS 
Sbjct: 122 SGGWDKRVMLWEVQSGQVLRHFVGHRDSVQSSDFA-----PSSDC---------LATGSW 167

Query: 779 DGTAKVWQVAS---GCCHQTLRGHTGAVLCLVLDTPGHTAFTGSNDATIRAW 925
           D T ++W + +   G  HQ L GH G + CL     G  A +GS D TI  W
Sbjct: 168 DSTIRMWDLRAGTPGIFHQELEGHRGNISCLCYSPSGLLA-SGSWDKTIHIW 218



 Score = 64.3 bits (155), Expect = 1e-10
 Identities = 49/190 (25%), Positives = 76/190 (40%), Gaps = 6/190 (3%)
 Frame = +2

Query: 287 LRVCADHRGGINWLSLSPDGQRLLTGSEDGTARLWSTADGQCCALLQGHESYVTFCQL-- 460
           L+V   H+  +  +S S D ++L +G  D    LW    GQ      GH   V       
Sbjct: 98  LQVLKGHQRSVETVSFSHDSKQLASGGWDKRVMLWEVQSGQVLRHFVGHRDSVQSSDFAP 157

Query: 461 EDEAAFTCSADCTIRKWDVLTGQ---CLQVFRGHTSIVNRILVTNNQLFSS-SYDRTARA 628
             +   T S D TIR WD+  G      Q   GH   ++ +  + + L +S S+D+T   
Sbjct: 158 SSDCLATGSWDSTIRMWDLRAGTPGIFHQELEGHRGNISCLCYSPSGLLASGSWDKTIHI 217

Query: 629 WSVDKGQVSREFRGHRNCVLTLAYSAPWDLPGAPCVEEAVAGGLLVTGSTDGTAKVWQVA 808
           W      +  + +GH   V ++A+S                G  L +       KVW   
Sbjct: 218 WKPSTRSLLIQLKGHITWVKSIAFSPD--------------GQQLASAGYSHMVKVWDCN 263

Query: 809 SGCCHQTLRG 838
           +G C +TL+G
Sbjct: 264 TGKCTETLKG 273


>ref|NP_001069717.1| F-box/WD repeat-containing protein 7 [Bos taurus].
          Length = 627

 Score =  112 bits (279), Expect = 6e-25
 Identities = 63/194 (32%), Positives = 91/194 (46%)
 Frame = +2

Query: 344 GQRLLTGSEDGTARLWSTADGQCCALLQGHESYVTFCQLEDEAAFTCSADCTIRKWDVLT 523
           G R+++GS+D T ++WS   G+C   L GH   V   Q+ D    + S D T++ W+  T
Sbjct: 311 GNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDNIIISGSTDRTLKVWNAET 370

Query: 524 GQCLQVFRGHTSIVNRILVTNNQLFSSSYDRTARAWSVDKGQVSREFRGHRNCVLTLAYS 703
           G+C+    GHTS V  + +   ++ S S D T R W ++ GQ      GH   V  + Y 
Sbjct: 371 GECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYD 430

Query: 704 APWDLPGAPCVEEAVAGGLLVTGSTDGTAKVWQVASGCCHQTLRGHTGAVLCLVLDTPGH 883
                           G  +V+G+ D   KVW   +  C  TL+GHT  V  L  D  G 
Sbjct: 431 ----------------GRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFD--GI 472

Query: 884 TAFTGSNDATIRAW 925
              +GS D +IR W
Sbjct: 473 HVVSGSLDTSIRVW 486



 Score =  102 bits (255), Expect = 4e-22
 Identities = 57/196 (29%), Positives = 91/196 (46%), Gaps = 3/196 (1%)
 Frame = +2

Query: 347 QRLLTGSEDGTARLWSTADGQCCALLQGHESYVTFCQLEDEAAFTCSADCTIRKWDVLTG 526
           +R+++GS D T R+W    GQC  +L GH + V   Q +     + + D  ++ WD  T 
Sbjct: 392 KRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETE 451

Query: 527 QCLQVFRGHTSIVNRILVTNNQLFSSSYDRTARAWSVDKGQVSREFRGHRNCVLTLAYSA 706
            CL   +GHT+ V  +      + S S D + R W V+ G       GH++    +    
Sbjct: 452 TCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGM---- 507

Query: 707 PWDLPGAPCVEEAVAGGLLVTGSTDGTAKVWQVASGCCHQTLRG---HTGAVLCLVLDTP 877
                        +   +LV+G+ D T K+W + +G C QTL+G   H  AV CL  +  
Sbjct: 508 ------------ELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNK- 554

Query: 878 GHTAFTGSNDATIRAW 925
            +   T S+D T++ W
Sbjct: 555 -NFVITSSDDGTVKLW 569



 Score = 86.3 bits (212), Expect = 4e-17
 Identities = 50/182 (27%), Positives = 83/182 (45%), Gaps = 3/182 (1%)
 Frame = +2

Query: 278 GSALRVCADHRGGINWLSLSPDGQRLLTGSEDGTARLWSTADGQCCALLQGHESYVTFCQ 457
           G  L V   H   +  +    DG+R+++G+ D   ++W      C   LQGH + V   Q
Sbjct: 411 GQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQ 468

Query: 458 LEDEAAFTCSADCTIRKWDVLTGQCLQVFRGHTSIVNRILVTNNQLFSSSYDRTARAWSV 637
            +     + S D +IR WDV TG C+    GH S+ + + + +N L S + D T + W +
Sbjct: 469 FDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNILVSGNADSTVKIWDI 528

Query: 638 DKGQVSREFRG---HRNCVLTLAYSAPWDLPGAPCVEEAVAGGLLVTGSTDGTAKVWQVA 808
             GQ  +  +G   H++ V  L ++                   ++T S DGT K+W + 
Sbjct: 529 KTGQCLQTLQGPNKHQSAVTCLQFNK----------------NFVITSSDDGTVKLWDLK 572

Query: 809 SG 814
           +G
Sbjct: 573 TG 574



 Score = 66.2 bits (160), Expect = 4e-11
 Identities = 41/131 (31%), Positives = 59/131 (45%), Gaps = 1/131 (0%)
 Frame = +2

Query: 536 QVFRGHTS-IVNRILVTNNQLFSSSYDRTARAWSVDKGQVSREFRGHRNCVLTLAYSAPW 712
           +V +GH   ++  +    N++ S S D T + WS   G+  R   GH   V        W
Sbjct: 294 KVLKGHDDHVITCLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGV--------W 345

Query: 713 DLPGAPCVEEAVAGGLLVTGSTDGTAKVWQVASGCCHQTLRGHTGAVLCLVLDTPGHTAF 892
                      +   ++++GSTD T KVW   +G C  TL GHT  V C+ L        
Sbjct: 346 --------SSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHE--KRVV 395

Query: 893 TGSNDATIRAW 925
           +GS DAT+R W
Sbjct: 396 SGSRDATLRVW 406



 Score = 52.4 bits (124), Expect = 6e-07
 Identities = 30/89 (33%), Positives = 45/89 (50%), Gaps = 8/89 (8%)
 Frame = +2

Query: 353 LLTGSEDGTARLWSTADGQCCALLQG---HESYVTFCQLEDEAAFTCSADCTIRKWDVLT 523
           L++G+ D T ++W    GQC   LQG   H+S VT  Q       T S D T++ WD+ T
Sbjct: 514 LVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLWDLKT 573

Query: 524 GQCLQVF-----RGHTSIVNRILVTNNQL 595
           G+ ++        G   +V RI  +N +L
Sbjct: 574 GEFIRNLVTLESGGSGGVVWRIRASNTKL 602


>ref|NP_001178407.1| transcription initiation factor TFIID subunit 5 [Bos taurus].
          Length = 800

 Score =  108 bits (271), Expect = 5e-24
 Identities = 73/219 (33%), Positives = 95/219 (43%), Gaps = 4/219 (1%)
 Frame = +2

Query: 281  SALRVCADHRGGINWLSLSPDGQRLLTGSEDGTARLWSTADGQCCALLQGHESYVTFCQL 460
            S L++   H G +   S SPD   LL+ SEDGT RLWS     C    +GH   V   Q 
Sbjct: 534  SELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQF 593

Query: 461  EDEAAFTCSA--DCTIRKWDVLTGQCLQVFRGHTSIVN--RILVTNNQLFSSSYDRTARA 628
                 +  S   D   R W     Q L++F GH + VN  R    +N + + S DRT R 
Sbjct: 594  SPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRL 653

Query: 629  WSVDKGQVSREFRGHRNCVLTLAYSAPWDLPGAPCVEEAVAGGLLVTGSTDGTAKVWQVA 808
            W V  G   R F GH+  + +L +S                G  L TG+TDG   +W + 
Sbjct: 654  WDVLNGNCVRIFTGHKGPIHSLTFSPN--------------GRFLATGATDGRVLLWDIG 699

Query: 809  SGCCHQTLRGHTGAVLCLVLDTPGHTAFTGSNDATIRAW 925
             G     L+GHT  V  L     G    +GS D T+R W
Sbjct: 700  HGLMVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLW 738



 Score = 53.5 bits (127), Expect = 3e-07
 Identities = 30/85 (35%), Positives = 44/85 (51%), Gaps = 4/85 (4%)
 Frame = +2

Query: 278 GSALRVCADHRGGINWLSLSPDGQRLLTGSEDGTARLWSTADGQCCALLQGHESYVTFCQ 457
           G+ +R+   H+G I+ L+ SP+G+ L TG+ DG   LW    G     L+GH    T C 
Sbjct: 659 GNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTD--TVCS 716

Query: 458 L----EDEAAFTCSADCTIRKWDVL 520
           L    + E   + S D T+R WD +
Sbjct: 717 LRFSRDGEILASGSMDNTVRLWDAV 741


>ref|XP_002698507.1| PREDICTED: TAF5 RNA polymerase II, TATA box binding protein
            (TBP)-associated factor, 100kDa [Bos taurus].
          Length = 800

 Score =  108 bits (271), Expect = 5e-24
 Identities = 73/219 (33%), Positives = 95/219 (43%), Gaps = 4/219 (1%)
 Frame = +2

Query: 281  SALRVCADHRGGINWLSLSPDGQRLLTGSEDGTARLWSTADGQCCALLQGHESYVTFCQL 460
            S L++   H G +   S SPD   LL+ SEDGT RLWS     C    +GH   V   Q 
Sbjct: 534  SELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQF 593

Query: 461  EDEAAFTCSA--DCTIRKWDVLTGQCLQVFRGHTSIVN--RILVTNNQLFSSSYDRTARA 628
                 +  S   D   R W     Q L++F GH + VN  R    +N + + S DRT R 
Sbjct: 594  SPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRL 653

Query: 629  WSVDKGQVSREFRGHRNCVLTLAYSAPWDLPGAPCVEEAVAGGLLVTGSTDGTAKVWQVA 808
            W V  G   R F GH+  + +L +S                G  L TG+TDG   +W + 
Sbjct: 654  WDVLNGNCVRIFTGHKGPIHSLTFSPN--------------GRFLATGATDGRVLLWDIG 699

Query: 809  SGCCHQTLRGHTGAVLCLVLDTPGHTAFTGSNDATIRAW 925
             G     L+GHT  V  L     G    +GS D T+R W
Sbjct: 700  HGLMVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLW 738



 Score = 53.5 bits (127), Expect = 3e-07
 Identities = 30/85 (35%), Positives = 44/85 (51%), Gaps = 4/85 (4%)
 Frame = +2

Query: 278 GSALRVCADHRGGINWLSLSPDGQRLLTGSEDGTARLWSTADGQCCALLQGHESYVTFCQ 457
           G+ +R+   H+G I+ L+ SP+G+ L TG+ DG   LW    G     L+GH    T C 
Sbjct: 659 GNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTD--TVCS 716

Query: 458 L----EDEAAFTCSADCTIRKWDVL 520
           L    + E   + S D T+R WD +
Sbjct: 717 LRFSRDGEILASGSMDNTVRLWDAV 741


>ref|NP_001098945.1| WD repeat-containing protein 5 [Bos taurus].
          Length = 334

 Score =  101 bits (251), Expect = 1e-21
 Identities = 63/223 (28%), Positives = 102/223 (45%), Gaps = 7/223 (3%)
 Frame = +2

Query: 278 GSALRVCADHRGGINWLSLSPDGQRLLTGSEDGTARLWSTADGQCCALLQGHESYVTFCQ 457
           G   +  + H+ GI+ ++ S D   L++ S+D T ++W  + G+C   L+GH +YV  C 
Sbjct: 77  GKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCN 136

Query: 458 LEDEAAFTCSA--DCTIRKWDVLTGQCLQVFRGHTSIVNRILVT--NNQLFSSSYDRTAR 625
              ++    S   D ++R WDV TG+CL+    H+  V+ +      + + SSSYD   R
Sbjct: 137 FNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCR 196

Query: 626 AWSVDKGQVSREFRGHRNCVLTLAYSAPWDLPGAPCVEEAVAGGLLVTGSTDGTAKVWQV 805
            W    GQ          C+ TL      D P    V+ +  G  ++  + D T K+W  
Sbjct: 197 IWDTASGQ----------CLKTLIDD---DNPPVSFVKFSPNGKYILAATLDNTLKLWDY 243

Query: 806 ASGCCHQTLRGHTGAVLCLVLD---TPGHTAFTGSNDATIRAW 925
           + G C +T  GH     C+  +   T G    +GS D  +  W
Sbjct: 244 SKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIW 286



 Score = 88.6 bits (218), Expect = 7e-18
 Identities = 62/243 (25%), Positives = 107/243 (44%), Gaps = 6/243 (2%)
 Frame = +2

Query: 215 PLPSGAQPAPGPRPTSRMGGGGSALR-VCADHRGGINWLSLSPDGQRLLTGSEDGTARLW 391
           P PS +     P P         AL+   A H   ++ +  SP+G+ L + S D   ++W
Sbjct: 17  PTPSSSATQSKPTPVKP----NYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIW 72

Query: 392 STADGQCCALLQGHESYVTFCQLEDEAAFTCSA--DCTIRKWDVLTGQCLQVFRGHTSIV 565
              DG+    + GH+  ++      ++    SA  D T++ WDV +G+CL+  +GH++ V
Sbjct: 73  GAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYV 132

Query: 566 --NRILVTNNQLFSSSYDRTARAWSVDKGQVSREFRGHRNCVLTLAYSAPWDLPGAPCVE 739
                   +N + S S+D + R W V  G+  +    H + V  + ++            
Sbjct: 133 FCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRD---------- 182

Query: 740 EAVAGGLLVTGSTDGTAKVWQVASGCCHQTLRGHTGAVLCLVLDTP-GHTAFTGSNDATI 916
               G L+V+ S DG  ++W  ASG C +TL       +  V  +P G      + D T+
Sbjct: 183 ----GSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTL 238

Query: 917 RAW 925
           + W
Sbjct: 239 KLW 241



 Score = 68.9 bits (167), Expect = 6e-12
 Identities = 44/183 (24%), Positives = 79/183 (43%), Gaps = 8/183 (4%)
 Frame = +2

Query: 278 GSALRVCADHRGGINWLSLSPDGQRLLTGSEDGTARLWSTADGQCC-ALLQGHESYVTFC 454
           G  L+    H   ++ +  + DG  +++ S DG  R+W TA GQC   L+      V+F 
Sbjct: 161 GKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFV 220

Query: 455 QLEDEAAFTCSA--DCTIRKWDVLTGQCLQVFRGHTS-----IVNRILVTNNQLFSSSYD 613
           +      +  +A  D T++ WD   G+CL+ + GH +       N  +     + S S D
Sbjct: 221 KFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSED 280

Query: 614 RTARAWSVDKGQVSREFRGHRNCVLTLAYSAPWDLPGAPCVEEAVAGGLLVTGSTDGTAK 793
                W++   ++ ++ +GH + V++ A             E  +A   L     D T K
Sbjct: 281 NLVYIWNLQTKEIVQKLQGHTDVVISTACHP---------TENIIASAAL---ENDKTIK 328

Query: 794 VWQ 802
           +W+
Sbjct: 329 LWK 331



 Score = 49.7 bits (117), Expect = 4e-06
 Identities = 30/122 (24%), Positives = 58/122 (47%), Gaps = 9/122 (7%)
 Frame = +2

Query: 302 DHRGGINWLSLSPDGQRLLTGSEDGTARLWSTADGQCCALLQGHES-----YVTFCQLED 466
           D    ++++  SP+G+ +L  + D T +LW  + G+C     GH++     +  F     
Sbjct: 212 DDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGG 271

Query: 467 EAAFTCSADCTIRKWDVLTGQCLQVFRGHTSIV--NRILVTNNQLFSSSY--DRTARAWS 634
           +   + S D  +  W++ T + +Q  +GHT +V       T N + S++   D+T + W 
Sbjct: 272 KWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLWK 331

Query: 635 VD 640
            D
Sbjct: 332 SD 333


>ref|NP_777088.1| platelet-activating factor acetylhydrolase IB subunit alpha [Bos
           taurus].
          Length = 410

 Score =  101 bits (251), Expect = 1e-21
 Identities = 66/228 (28%), Positives = 105/228 (46%), Gaps = 12/228 (5%)
 Frame = +2

Query: 278 GSALRVCADHRGGINWLSLSPDGQRLLTGSEDGTARLWSTADGQCCALLQGHESYVTFCQ 457
           G   R    H   +  +S    G+ L + S D T +LW     +C   + GH+  V+   
Sbjct: 140 GDFERTLKGHTDSVEDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVA 199

Query: 458 L--EDEAAFTCSADCTIRKWDVLTGQCLQVFRGHTSIVNRILVTNNQ----LFSSSYDRT 619
           +    +   + S D TI+ W+V TG C++ F GH   V   +V  NQ    + S S D+T
Sbjct: 200 IMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVR--MVRPNQDGTLIASCSNDQT 257

Query: 620 ARAWSVDKGQVSREFRGHRNCVLTLA------YSAPWDLPGAPCVEEAVAGGLLVTGSTD 781
            R W V   +   E R H + V  ++      YS+  +  G+   +    G  L++GS D
Sbjct: 258 VRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRD 317

Query: 782 GTAKVWQVASGCCHQTLRGHTGAVLCLVLDTPGHTAFTGSNDATIRAW 925
            T K+W V++G C  TL GH   V  ++  + G    + ++D T+R W
Sbjct: 318 KTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVW 365



 Score = 71.6 bits (174), Expect = 9e-13
 Identities = 53/201 (26%), Positives = 82/201 (40%), Gaps = 26/201 (12%)
 Frame = +2

Query: 278 GSALRVCADHRGGINWLSLSPDGQRLLTGSEDGTARLWSTADGQCCALLQGHESYVTFCQ 457
           G  ++    HR  +  +  + DG  + + S D T R+W  A  +C A L+ HE  V    
Sbjct: 224 GYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECIS 283

Query: 458 LEDEAAFTC----------------------SADCTIRKWDVLTGQCLQVFRGHTSIVNR 571
              E++++                       S D TI+ WDV TG CL    GH + V  
Sbjct: 284 WAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRG 343

Query: 572 ILVTNNQLF--SSSYDRTARAWSVDKGQVSREFRGHRNCVLTLAY--SAPWDLPGAPCVE 739
           +L  +   F  S + D+T R W     +  +    H + V +L +  +AP+         
Sbjct: 344 VLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPY--------- 394

Query: 740 EAVAGGLLVTGSTDGTAKVWQ 802
                  +VTGS D T KVW+
Sbjct: 395 -------VVTGSVDQTVKVWE 408



 Score = 68.2 bits (165), Expect = 1e-11
 Identities = 53/172 (30%), Positives = 74/172 (43%), Gaps = 4/172 (2%)
 Frame = +2

Query: 422 LQGHESYVTFCQLEDEAAFTCSA--DCTIRKWDVLTGQCLQVFRGHTSIVNRILV--TNN 589
           L GH S VT        +   SA  D TI+ WD  TG   +  +GHT  V  I    +  
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVEDISFDHSGK 163

Query: 590 QLFSSSYDRTARAWSVDKGQVSREFRGHRNCVLTLAYSAPWDLPGAPCVEEAVAGGLLVT 769
            L S S D T + W     +  R   GH + V ++A      +P          G  +V+
Sbjct: 164 LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAI-----MPN---------GDHIVS 209

Query: 770 GSTDGTAKVWQVASGCCHQTLRGHTGAVLCLVLDTPGHTAFTGSNDATIRAW 925
            S D T K+W+V +G C +T  GH   V  +  +  G    + SND T+R W
Sbjct: 210 ASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVW 261


>ref|XP_002696296.1| PREDICTED: F-box and WD repeat domain containing 11 [Bos taurus].
          Length = 542

 Score = 97.1 bits (240), Expect = 2e-20
 Identities = 61/216 (28%), Positives = 95/216 (43%), Gaps = 3/216 (1%)
 Frame = +2

Query: 287 LRVCADHRGGINWLSLSPDGQRLLTGSEDGTARLWSTADGQCCALLQGHESYVTFCQLED 466
           L+V   H G +  L L  D + ++TGS D T R+W    G+    L  H   V   +  +
Sbjct: 273 LKVLTGHTGSV--LCLQYDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSN 330

Query: 467 EAAFTCSADCTIRKWDVLTGQCL---QVFRGHTSIVNRILVTNNQLFSSSYDRTARAWSV 637
               TCS D +I  WD+ +   +   +V  GH + VN +   +  + S+S DRT + WS 
Sbjct: 331 GLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWST 390

Query: 638 DKGQVSREFRGHRNCVLTLAYSAPWDLPGAPCVEEAVAGGLLVTGSTDGTAKVWQVASGC 817
              +  R   GH+  +  L Y                   L+V+GS+D T ++W +  G 
Sbjct: 391 STCEFVRTLNGHKRGIACLQY----------------RDRLVVSGSSDNTIRLWDIECGA 434

Query: 818 CHQTLRGHTGAVLCLVLDTPGHTAFTGSNDATIRAW 925
           C + L GH   V C+  D       +G+ D  I+ W
Sbjct: 435 CLRVLEGHEELVRCIRFD--NKRIVSGAYDGKIKVW 468



 Score = 74.3 bits (181), Expect = 1e-13
 Identities = 37/116 (31%), Positives = 59/116 (50%)
 Frame = +2

Query: 290 RVCADHRGGINWLSLSPDGQRLLTGSEDGTARLWSTADGQCCALLQGHESYVTFCQLEDE 469
           RV   HR  +N +    D + +++ S D T ++WST+  +    L GH+  +   Q  D 
Sbjct: 357 RVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDR 414

Query: 470 AAFTCSADCTIRKWDVLTGQCLQVFRGHTSIVNRILVTNNQLFSSSYDRTARAWSV 637
              + S+D TIR WD+  G CL+V  GH  +V  I   N ++ S +YD   + W +
Sbjct: 415 LVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDL 470



 Score = 68.6 bits (166), Expect = 8e-12
 Identities = 57/228 (25%), Positives = 87/228 (38%), Gaps = 12/228 (5%)
 Frame = +2

Query: 278 GSALRVCADHRGGINWLSLSPDGQRLLTGSEDGTARLWSTADGQCCAL---LQGHESYVT 448
           G  L     H   +  L  S     ++T S+D +  +W  A      L   L GH + V 
Sbjct: 310 GEVLNTLIHHNEAVLHLRFS--NGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVN 367

Query: 449 FCQLEDEAAFTCSADCTIRKWDVLTGQCLQVFRGHTSIVNRILVTNNQLFSSSYDRTARA 628
               +D+   + S D TI+ W   T + ++   GH   +  +   +  + S S D T R 
Sbjct: 368 VVDFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRL 427

Query: 629 WSVDKGQVSREFRGHRNCVLTLAYSAPWDLPGAPCVEEAVAGGLLVTGSTDGTAKVWQV- 805
           W ++ G   R   GH   V  + +                    +V+G+ DG  KVW + 
Sbjct: 428 WDIECGACLRVLEGHEELVRCIRFD----------------NKRIVSGAYDGKIKVWDLQ 471

Query: 806 --------ASGCCHQTLRGHTGAVLCLVLDTPGHTAFTGSNDATIRAW 925
                   AS  C +TL  H+G V  L  D       + S+D TI  W
Sbjct: 472 AALDPRAPASTLCLRTLVEHSGRVFRLQFDE--FQIISSSHDDTILIW 517


>ref|XP_612428.5| PREDICTED: F-box and WD repeat domain containing 11 isoform 1 [Bos
           taurus].
          Length = 542

 Score = 97.1 bits (240), Expect = 2e-20
 Identities = 61/216 (28%), Positives = 95/216 (43%), Gaps = 3/216 (1%)
 Frame = +2

Query: 287 LRVCADHRGGINWLSLSPDGQRLLTGSEDGTARLWSTADGQCCALLQGHESYVTFCQLED 466
           L+V   H G +  L L  D + ++TGS D T R+W    G+    L  H   V   +  +
Sbjct: 273 LKVLTGHTGSV--LCLQYDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSN 330

Query: 467 EAAFTCSADCTIRKWDVLTGQCL---QVFRGHTSIVNRILVTNNQLFSSSYDRTARAWSV 637
               TCS D +I  WD+ +   +   +V  GH + VN +   +  + S+S DRT + WS 
Sbjct: 331 GLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWST 390

Query: 638 DKGQVSREFRGHRNCVLTLAYSAPWDLPGAPCVEEAVAGGLLVTGSTDGTAKVWQVASGC 817
              +  R   GH+  +  L Y                   L+V+GS+D T ++W +  G 
Sbjct: 391 STCEFVRTLNGHKRGIACLQY----------------RDRLVVSGSSDNTIRLWDIECGA 434

Query: 818 CHQTLRGHTGAVLCLVLDTPGHTAFTGSNDATIRAW 925
           C + L GH   V C+  D       +G+ D  I+ W
Sbjct: 435 CLRVLEGHEELVRCIRFD--NKRIVSGAYDGKIKVW 468



 Score = 74.3 bits (181), Expect = 1e-13
 Identities = 37/116 (31%), Positives = 59/116 (50%)
 Frame = +2

Query: 290 RVCADHRGGINWLSLSPDGQRLLTGSEDGTARLWSTADGQCCALLQGHESYVTFCQLEDE 469
           RV   HR  +N +    D + +++ S D T ++WST+  +    L GH+  +   Q  D 
Sbjct: 357 RVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDR 414

Query: 470 AAFTCSADCTIRKWDVLTGQCLQVFRGHTSIVNRILVTNNQLFSSSYDRTARAWSV 637
              + S+D TIR WD+  G CL+V  GH  +V  I   N ++ S +YD   + W +
Sbjct: 415 LVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDL 470



 Score = 68.6 bits (166), Expect = 8e-12
 Identities = 57/228 (25%), Positives = 87/228 (38%), Gaps = 12/228 (5%)
 Frame = +2

Query: 278 GSALRVCADHRGGINWLSLSPDGQRLLTGSEDGTARLWSTADGQCCAL---LQGHESYVT 448
           G  L     H   +  L  S     ++T S+D +  +W  A      L   L GH + V 
Sbjct: 310 GEVLNTLIHHNEAVLHLRFS--NGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVN 367

Query: 449 FCQLEDEAAFTCSADCTIRKWDVLTGQCLQVFRGHTSIVNRILVTNNQLFSSSYDRTARA 628
               +D+   + S D TI+ W   T + ++   GH   +  +   +  + S S D T R 
Sbjct: 368 VVDFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRL 427

Query: 629 WSVDKGQVSREFRGHRNCVLTLAYSAPWDLPGAPCVEEAVAGGLLVTGSTDGTAKVWQV- 805
           W ++ G   R   GH   V  + +                    +V+G+ DG  KVW + 
Sbjct: 428 WDIECGACLRVLEGHEELVRCIRFD----------------NKRIVSGAYDGKIKVWDLQ 471

Query: 806 --------ASGCCHQTLRGHTGAVLCLVLDTPGHTAFTGSNDATIRAW 925
                   AS  C +TL  H+G V  L  D       + S+D TI  W
Sbjct: 472 AALDPRAPASTLCLRTLVEHSGRVFRLQFDE--FQIISSSHDDTILIW 517


  Database: RefSeq49_BP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 17,681,374
  Number of sequences in database:  33,088
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33088
Number of Hits to DB: 37,952,610
Number of extensions: 1261642
Number of successful extensions: 10886
Number of sequences better than 1.0e-05: 112
Number of HSP's gapped: 9702
Number of HSP's successfully gapped: 275
Length of query: 308
Length of database: 17,681,374
Length adjustment: 102
Effective length of query: 206
Effective length of database: 14,306,398
Effective search space: 2947117988
Effective search space used: 2947117988
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-013843
         (926 letters)

Database: RefSeq49_CP.fasta 
           33,336 sequences; 18,874,504 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|XP_532767.2| PREDICTED: similar to F-box and WD-40 domain pr...   330   1e-90
Alignment   gi|XP_867701.1| PREDICTED: similar to F-box protein FBW7 isofor...   115   6e-26
Alignment   gi|XP_532689.2| PREDICTED: similar to F-box protein FBW7 isofor...   112   6e-25
Alignment   gi|XP_867720.1| PREDICTED: similar to F-box protein FBW7 isofor...   112   6e-25
Alignment   gi|XP_853624.1| PREDICTED: similar to F-box protein FBW7 isofor...   112   6e-25
Alignment   gi|XP_537775.2| PREDICTED: similar to platelet-activating facto...   101   1e-21
Alignment   gi|XP_854482.1| PREDICTED: similar to platelet-activating facto...   101   1e-21
Alignment   gi|XP_868508.1| PREDICTED: similar to platelet-activating facto...   101   1e-21
Alignment   gi|XP_866627.1| PREDICTED: similar to F-box/WD-repeat protein 1...    97   2e-20
Alignment   gi|XP_852961.1| PREDICTED: similar to F-box and WD-40 domain pr...    97   2e-20

>ref|XP_532767.2| PREDICTED: similar to F-box and WD-40 domain protein 7, archipelago
           homolog [Canis familiaris].
          Length = 544

 Score =  330 bits (846), Expect = 1e-90
 Identities = 157/166 (94%), Positives = 158/166 (95%)
 Frame = +2

Query: 428 GHESYVTFCQLEDEAAFTCSADCTIRKWDVLTGQCLQVFRGHTSIVNRILVTNNQLFSSS 607
           GHESYVTFCQLEDEAAFTCSADCTIRKWDV TGQCLQVFRGHTSIVNRILV NNQLFSSS
Sbjct: 178 GHESYVTFCQLEDEAAFTCSADCTIRKWDVRTGQCLQVFRGHTSIVNRILVANNQLFSSS 237

Query: 608 YDRTARAWSVDKGQVSREFRGHRNCVLTLAYSAPWDLPGAPCVEEAVAGGLLVTGSTDGT 787
           YDRTARAWSVDKGQVS+EFRGHRNCVLTLAYSAPWDLPGAPC EE   GGLLVTGSTDGT
Sbjct: 238 YDRTARAWSVDKGQVSQEFRGHRNCVLTLAYSAPWDLPGAPCAEE--VGGLLVTGSTDGT 295

Query: 788 AKVWQVASGCCHQTLRGHTGAVLCLVLDTPGHTAFTGSNDATIRAW 925
           AKVWQVASGCCHQTLRGHTGAVLCLVLDTP HTAFTGS DATIRAW
Sbjct: 296 AKVWQVASGCCHQTLRGHTGAVLCLVLDTPSHTAFTGSTDATIRAW 341



 Score =  117 bits (294), Expect = 1e-26
 Identities = 54/54 (100%), Positives = 54/54 (100%)
 Frame = +2

Query: 266 MGGGGSALRVCADHRGGINWLSLSPDGQRLLTGSEDGTARLWSTADGQCCALLQ 427
           MGGGGSALRVCADHRGGINWLSLSPDGQRLLTGSEDGTARLWSTADGQCCALLQ
Sbjct: 1   MGGGGSALRVCADHRGGINWLSLSPDGQRLLTGSEDGTARLWSTADGQCCALLQ 54


>ref|XP_867701.1| PREDICTED: similar to F-box protein FBW7 isoform 2 isoform 3 [Canis
           familiaris].
          Length = 279

 Score =  115 bits (288), Expect = 6e-26
 Identities = 64/218 (29%), Positives = 103/218 (47%), Gaps = 27/218 (12%)
 Frame = +2

Query: 353 LLTGSEDGTARLWSTADGQCCALLQGHESYVTFCQLEDEAAFTCSADCTIRKWDVLTGQC 532
           +++GS D T ++W+   G+C   L GH S V    L ++   + S D T+R WD+ TGQC
Sbjct: 6   IISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQC 65

Query: 533 LQVFRGHTSIVNRILVTNNQLFSSSYDRTARAWSVDKGQVSREFRGHRNCVLTLAYSA-- 706
           L V  GH + V  +     ++ S +YD   + W  +        +GH N V +L +    
Sbjct: 66  LHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIH 125

Query: 707 -----------PWDLPGAPCV-----EEAVAGG------LLVTGSTDGTAKVWQVASGCC 820
                       WD+    C+      +++  G      +LV+G+ D T K+W + +G C
Sbjct: 126 VVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNILVSGNADSTVKIWDIKTGQC 185

Query: 821 HQTLRG---HTGAVLCLVLDTPGHTAFTGSNDATIRAW 925
            QTL+G   H  AV CL  +   +   T S+D T++ W
Sbjct: 186 LQTLQGPNKHQSAVTCLQFNK--NFVITSSDDGTVKLW 221



 Score = 86.3 bits (212), Expect = 4e-17
 Identities = 50/182 (27%), Positives = 83/182 (45%), Gaps = 3/182 (1%)
 Frame = +2

Query: 278 GSALRVCADHRGGINWLSLSPDGQRLLTGSEDGTARLWSTADGQCCALLQGHESYVTFCQ 457
           G  L V   H   +  +    DG+R+++G+ D   ++W      C   LQGH + V   Q
Sbjct: 63  GQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQ 120

Query: 458 LEDEAAFTCSADCTIRKWDVLTGQCLQVFRGHTSIVNRILVTNNQLFSSSYDRTARAWSV 637
            +     + S D +IR WDV TG C+    GH S+ + + + +N L S + D T + W +
Sbjct: 121 FDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNILVSGNADSTVKIWDI 180

Query: 638 DKGQVSREFRG---HRNCVLTLAYSAPWDLPGAPCVEEAVAGGLLVTGSTDGTAKVWQVA 808
             GQ  +  +G   H++ V  L ++                   ++T S DGT K+W + 
Sbjct: 181 KTGQCLQTLQGPNKHQSAVTCLQFNK----------------NFVITSSDDGTVKLWDLK 224

Query: 809 SG 814
           +G
Sbjct: 225 TG 226



 Score = 80.1 bits (196), Expect = 3e-15
 Identities = 48/156 (30%), Positives = 69/156 (44%)
 Frame = +2

Query: 458 LEDEAAFTCSADCTIRKWDVLTGQCLQVFRGHTSIVNRILVTNNQLFSSSYDRTARAWSV 637
           + D    + S D T++ W+  TG+C+    GHTS V  + +   ++ S S D T R W +
Sbjct: 1   MRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDI 60

Query: 638 DKGQVSREFRGHRNCVLTLAYSAPWDLPGAPCVEEAVAGGLLVTGSTDGTAKVWQVASGC 817
           + GQ      GH   V  + Y                 G  +V+G+ D   KVW   +  
Sbjct: 61  ETGQCLHVLMGHVAAVRCVQYD----------------GRRVVSGAYDFMVKVWDPETET 104

Query: 818 CHQTLRGHTGAVLCLVLDTPGHTAFTGSNDATIRAW 925
           C  TL+GHT  V  L  D  G    +GS D +IR W
Sbjct: 105 CLHTLQGHTNRVYSLQFD--GIHVVSGSLDTSIRVW 138



 Score = 52.4 bits (124), Expect = 6e-07
 Identities = 30/89 (33%), Positives = 45/89 (50%), Gaps = 8/89 (8%)
 Frame = +2

Query: 353 LLTGSEDGTARLWSTADGQCCALLQG---HESYVTFCQLEDEAAFTCSADCTIRKWDVLT 523
           L++G+ D T ++W    GQC   LQG   H+S VT  Q       T S D T++ WD+ T
Sbjct: 166 LVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLWDLKT 225

Query: 524 GQCLQVF-----RGHTSIVNRILVTNNQL 595
           G+ ++        G   +V RI  +N +L
Sbjct: 226 GEFIRNLVTLESGGSGGVVWRIRASNTKL 254


>ref|XP_532689.2| PREDICTED: similar to F-box protein FBW7 isoform 3 isoform 1 [Canis
           familiaris].
          Length = 589

 Score =  112 bits (279), Expect = 6e-25
 Identities = 63/194 (32%), Positives = 91/194 (46%)
 Frame = +2

Query: 344 GQRLLTGSEDGTARLWSTADGQCCALLQGHESYVTFCQLEDEAAFTCSADCTIRKWDVLT 523
           G R+++GS+D T ++WS   G+C   L GH   V   Q+ D    + S D T++ W+  T
Sbjct: 273 GNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDNIIISGSTDRTLKVWNAET 332

Query: 524 GQCLQVFRGHTSIVNRILVTNNQLFSSSYDRTARAWSVDKGQVSREFRGHRNCVLTLAYS 703
           G+C+    GHTS V  + +   ++ S S D T R W ++ GQ      GH   V  + Y 
Sbjct: 333 GECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYD 392

Query: 704 APWDLPGAPCVEEAVAGGLLVTGSTDGTAKVWQVASGCCHQTLRGHTGAVLCLVLDTPGH 883
                           G  +V+G+ D   KVW   +  C  TL+GHT  V  L  D  G 
Sbjct: 393 ----------------GRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFD--GI 434

Query: 884 TAFTGSNDATIRAW 925
              +GS D +IR W
Sbjct: 435 HVVSGSLDTSIRVW 448



 Score =  102 bits (255), Expect = 4e-22
 Identities = 57/196 (29%), Positives = 91/196 (46%), Gaps = 3/196 (1%)
 Frame = +2

Query: 347 QRLLTGSEDGTARLWSTADGQCCALLQGHESYVTFCQLEDEAAFTCSADCTIRKWDVLTG 526
           +R+++GS D T R+W    GQC  +L GH + V   Q +     + + D  ++ WD  T 
Sbjct: 354 KRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETE 413

Query: 527 QCLQVFRGHTSIVNRILVTNNQLFSSSYDRTARAWSVDKGQVSREFRGHRNCVLTLAYSA 706
            CL   +GHT+ V  +      + S S D + R W V+ G       GH++    +    
Sbjct: 414 TCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGM---- 469

Query: 707 PWDLPGAPCVEEAVAGGLLVTGSTDGTAKVWQVASGCCHQTLRG---HTGAVLCLVLDTP 877
                        +   +LV+G+ D T K+W + +G C QTL+G   H  AV CL  +  
Sbjct: 470 ------------ELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNK- 516

Query: 878 GHTAFTGSNDATIRAW 925
            +   T S+D T++ W
Sbjct: 517 -NFVITSSDDGTVKLW 531



 Score = 86.3 bits (212), Expect = 4e-17
 Identities = 50/182 (27%), Positives = 83/182 (45%), Gaps = 3/182 (1%)
 Frame = +2

Query: 278 GSALRVCADHRGGINWLSLSPDGQRLLTGSEDGTARLWSTADGQCCALLQGHESYVTFCQ 457
           G  L V   H   +  +    DG+R+++G+ D   ++W      C   LQGH + V   Q
Sbjct: 373 GQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQ 430

Query: 458 LEDEAAFTCSADCTIRKWDVLTGQCLQVFRGHTSIVNRILVTNNQLFSSSYDRTARAWSV 637
            +     + S D +IR WDV TG C+    GH S+ + + + +N L S + D T + W +
Sbjct: 431 FDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNILVSGNADSTVKIWDI 490

Query: 638 DKGQVSREFRG---HRNCVLTLAYSAPWDLPGAPCVEEAVAGGLLVTGSTDGTAKVWQVA 808
             GQ  +  +G   H++ V  L ++                   ++T S DGT K+W + 
Sbjct: 491 KTGQCLQTLQGPNKHQSAVTCLQFNK----------------NFVITSSDDGTVKLWDLK 534

Query: 809 SG 814
           +G
Sbjct: 535 TG 536



 Score = 66.2 bits (160), Expect = 4e-11
 Identities = 41/131 (31%), Positives = 59/131 (45%), Gaps = 1/131 (0%)
 Frame = +2

Query: 536 QVFRGHTS-IVNRILVTNNQLFSSSYDRTARAWSVDKGQVSREFRGHRNCVLTLAYSAPW 712
           +V +GH   ++  +    N++ S S D T + WS   G+  R   GH   V        W
Sbjct: 256 KVLKGHDDHVITCLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGV--------W 307

Query: 713 DLPGAPCVEEAVAGGLLVTGSTDGTAKVWQVASGCCHQTLRGHTGAVLCLVLDTPGHTAF 892
                      +   ++++GSTD T KVW   +G C  TL GHT  V C+ L        
Sbjct: 308 --------SSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHE--KRVV 357

Query: 893 TGSNDATIRAW 925
           +GS DAT+R W
Sbjct: 358 SGSRDATLRVW 368



 Score = 52.4 bits (124), Expect = 6e-07
 Identities = 30/89 (33%), Positives = 45/89 (50%), Gaps = 8/89 (8%)
 Frame = +2

Query: 353 LLTGSEDGTARLWSTADGQCCALLQG---HESYVTFCQLEDEAAFTCSADCTIRKWDVLT 523
           L++G+ D T ++W    GQC   LQG   H+S VT  Q       T S D T++ WD+ T
Sbjct: 476 LVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLWDLKT 535

Query: 524 GQCLQVF-----RGHTSIVNRILVTNNQL 595
           G+ ++        G   +V RI  +N +L
Sbjct: 536 GEFIRNLVTLESGGSGGVVWRIRASNTKL 564


>ref|XP_867720.1| PREDICTED: similar to F-box protein FBW7 isoform 2 isoform 5 [Canis
           familiaris].
          Length = 637

 Score =  112 bits (279), Expect = 6e-25
 Identities = 63/194 (32%), Positives = 91/194 (46%)
 Frame = +2

Query: 344 GQRLLTGSEDGTARLWSTADGQCCALLQGHESYVTFCQLEDEAAFTCSADCTIRKWDVLT 523
           G R+++GS+D T ++WS   G+C   L GH   V   Q+ D    + S D T++ W+  T
Sbjct: 321 GNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDNIIISGSTDRTLKVWNAET 380

Query: 524 GQCLQVFRGHTSIVNRILVTNNQLFSSSYDRTARAWSVDKGQVSREFRGHRNCVLTLAYS 703
           G+C+    GHTS V  + +   ++ S S D T R W ++ GQ      GH   V  + Y 
Sbjct: 381 GECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYD 440

Query: 704 APWDLPGAPCVEEAVAGGLLVTGSTDGTAKVWQVASGCCHQTLRGHTGAVLCLVLDTPGH 883
                           G  +V+G+ D   KVW   +  C  TL+GHT  V  L  D  G 
Sbjct: 441 ----------------GRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFD--GI 482

Query: 884 TAFTGSNDATIRAW 925
              +GS D +IR W
Sbjct: 483 HVVSGSLDTSIRVW 496



 Score =  102 bits (255), Expect = 4e-22
 Identities = 57/196 (29%), Positives = 91/196 (46%), Gaps = 3/196 (1%)
 Frame = +2

Query: 347 QRLLTGSEDGTARLWSTADGQCCALLQGHESYVTFCQLEDEAAFTCSADCTIRKWDVLTG 526
           +R+++GS D T R+W    GQC  +L GH + V   Q +     + + D  ++ WD  T 
Sbjct: 402 KRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETE 461

Query: 527 QCLQVFRGHTSIVNRILVTNNQLFSSSYDRTARAWSVDKGQVSREFRGHRNCVLTLAYSA 706
            CL   +GHT+ V  +      + S S D + R W V+ G       GH++    +    
Sbjct: 462 TCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGM---- 517

Query: 707 PWDLPGAPCVEEAVAGGLLVTGSTDGTAKVWQVASGCCHQTLRG---HTGAVLCLVLDTP 877
                        +   +LV+G+ D T K+W + +G C QTL+G   H  AV CL  +  
Sbjct: 518 ------------ELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNK- 564

Query: 878 GHTAFTGSNDATIRAW 925
            +   T S+D T++ W
Sbjct: 565 -NFVITSSDDGTVKLW 579



 Score = 86.3 bits (212), Expect = 4e-17
 Identities = 50/182 (27%), Positives = 83/182 (45%), Gaps = 3/182 (1%)
 Frame = +2

Query: 278 GSALRVCADHRGGINWLSLSPDGQRLLTGSEDGTARLWSTADGQCCALLQGHESYVTFCQ 457
           G  L V   H   +  +    DG+R+++G+ D   ++W      C   LQGH + V   Q
Sbjct: 421 GQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQ 478

Query: 458 LEDEAAFTCSADCTIRKWDVLTGQCLQVFRGHTSIVNRILVTNNQLFSSSYDRTARAWSV 637
            +     + S D +IR WDV TG C+    GH S+ + + + +N L S + D T + W +
Sbjct: 479 FDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNILVSGNADSTVKIWDI 538

Query: 638 DKGQVSREFRG---HRNCVLTLAYSAPWDLPGAPCVEEAVAGGLLVTGSTDGTAKVWQVA 808
             GQ  +  +G   H++ V  L ++                   ++T S DGT K+W + 
Sbjct: 539 KTGQCLQTLQGPNKHQSAVTCLQFNK----------------NFVITSSDDGTVKLWDLK 582

Query: 809 SG 814
           +G
Sbjct: 583 TG 584



 Score = 66.2 bits (160), Expect = 4e-11
 Identities = 41/131 (31%), Positives = 59/131 (45%), Gaps = 1/131 (0%)
 Frame = +2

Query: 536 QVFRGHTS-IVNRILVTNNQLFSSSYDRTARAWSVDKGQVSREFRGHRNCVLTLAYSAPW 712
           +V +GH   ++  +    N++ S S D T + WS   G+  R   GH   V        W
Sbjct: 304 KVLKGHDDHVITCLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGV--------W 355

Query: 713 DLPGAPCVEEAVAGGLLVTGSTDGTAKVWQVASGCCHQTLRGHTGAVLCLVLDTPGHTAF 892
                      +   ++++GSTD T KVW   +G C  TL GHT  V C+ L        
Sbjct: 356 --------SSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHE--KRVV 405

Query: 893 TGSNDATIRAW 925
           +GS DAT+R W
Sbjct: 406 SGSRDATLRVW 416



 Score = 52.4 bits (124), Expect = 6e-07
 Identities = 30/89 (33%), Positives = 45/89 (50%), Gaps = 8/89 (8%)
 Frame = +2

Query: 353 LLTGSEDGTARLWSTADGQCCALLQG---HESYVTFCQLEDEAAFTCSADCTIRKWDVLT 523
           L++G+ D T ++W    GQC   LQG   H+S VT  Q       T S D T++ WD+ T
Sbjct: 524 LVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLWDLKT 583

Query: 524 GQCLQVF-----RGHTSIVNRILVTNNQL 595
           G+ ++        G   +V RI  +N +L
Sbjct: 584 GEFIRNLVTLESGGSGGVVWRIRASNTKL 612


>ref|XP_853624.1| PREDICTED: similar to F-box protein FBW7 isoform 2 isoform 2 [Canis
           familiaris].
          Length = 627

 Score =  112 bits (279), Expect = 6e-25
 Identities = 63/194 (32%), Positives = 91/194 (46%)
 Frame = +2

Query: 344 GQRLLTGSEDGTARLWSTADGQCCALLQGHESYVTFCQLEDEAAFTCSADCTIRKWDVLT 523
           G R+++GS+D T ++WS   G+C   L GH   V   Q+ D    + S D T++ W+  T
Sbjct: 311 GNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDNIIISGSTDRTLKVWNAET 370

Query: 524 GQCLQVFRGHTSIVNRILVTNNQLFSSSYDRTARAWSVDKGQVSREFRGHRNCVLTLAYS 703
           G+C+    GHTS V  + +   ++ S S D T R W ++ GQ      GH   V  + Y 
Sbjct: 371 GECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYD 430

Query: 704 APWDLPGAPCVEEAVAGGLLVTGSTDGTAKVWQVASGCCHQTLRGHTGAVLCLVLDTPGH 883
                           G  +V+G+ D   KVW   +  C  TL+GHT  V  L  D  G 
Sbjct: 431 ----------------GRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFD--GI 472

Query: 884 TAFTGSNDATIRAW 925
              +GS D +IR W
Sbjct: 473 HVVSGSLDTSIRVW 486



 Score =  102 bits (255), Expect = 4e-22
 Identities = 57/196 (29%), Positives = 91/196 (46%), Gaps = 3/196 (1%)
 Frame = +2

Query: 347 QRLLTGSEDGTARLWSTADGQCCALLQGHESYVTFCQLEDEAAFTCSADCTIRKWDVLTG 526
           +R+++GS D T R+W    GQC  +L GH + V   Q +     + + D  ++ WD  T 
Sbjct: 392 KRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETE 451

Query: 527 QCLQVFRGHTSIVNRILVTNNQLFSSSYDRTARAWSVDKGQVSREFRGHRNCVLTLAYSA 706
            CL   +GHT+ V  +      + S S D + R W V+ G       GH++    +    
Sbjct: 452 TCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGM---- 507

Query: 707 PWDLPGAPCVEEAVAGGLLVTGSTDGTAKVWQVASGCCHQTLRG---HTGAVLCLVLDTP 877
                        +   +LV+G+ D T K+W + +G C QTL+G   H  AV CL  +  
Sbjct: 508 ------------ELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNK- 554

Query: 878 GHTAFTGSNDATIRAW 925
            +   T S+D T++ W
Sbjct: 555 -NFVITSSDDGTVKLW 569



 Score = 86.3 bits (212), Expect = 4e-17
 Identities = 50/182 (27%), Positives = 83/182 (45%), Gaps = 3/182 (1%)
 Frame = +2

Query: 278 GSALRVCADHRGGINWLSLSPDGQRLLTGSEDGTARLWSTADGQCCALLQGHESYVTFCQ 457
           G  L V   H   +  +    DG+R+++G+ D   ++W      C   LQGH + V   Q
Sbjct: 411 GQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQ 468

Query: 458 LEDEAAFTCSADCTIRKWDVLTGQCLQVFRGHTSIVNRILVTNNQLFSSSYDRTARAWSV 637
            +     + S D +IR WDV TG C+    GH S+ + + + +N L S + D T + W +
Sbjct: 469 FDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNILVSGNADSTVKIWDI 528

Query: 638 DKGQVSREFRG---HRNCVLTLAYSAPWDLPGAPCVEEAVAGGLLVTGSTDGTAKVWQVA 808
             GQ  +  +G   H++ V  L ++                   ++T S DGT K+W + 
Sbjct: 529 KTGQCLQTLQGPNKHQSAVTCLQFNK----------------NFVITSSDDGTVKLWDLK 572

Query: 809 SG 814
           +G
Sbjct: 573 TG 574



 Score = 66.2 bits (160), Expect = 4e-11
 Identities = 41/131 (31%), Positives = 59/131 (45%), Gaps = 1/131 (0%)
 Frame = +2

Query: 536 QVFRGHTS-IVNRILVTNNQLFSSSYDRTARAWSVDKGQVSREFRGHRNCVLTLAYSAPW 712
           +V +GH   ++  +    N++ S S D T + WS   G+  R   GH   V        W
Sbjct: 294 KVLKGHDDHVITCLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGV--------W 345

Query: 713 DLPGAPCVEEAVAGGLLVTGSTDGTAKVWQVASGCCHQTLRGHTGAVLCLVLDTPGHTAF 892
                      +   ++++GSTD T KVW   +G C  TL GHT  V C+ L        
Sbjct: 346 --------SSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHE--KRVV 395

Query: 893 TGSNDATIRAW 925
           +GS DAT+R W
Sbjct: 396 SGSRDATLRVW 406



 Score = 52.4 bits (124), Expect = 6e-07
 Identities = 30/89 (33%), Positives = 45/89 (50%), Gaps = 8/89 (8%)
 Frame = +2

Query: 353 LLTGSEDGTARLWSTADGQCCALLQG---HESYVTFCQLEDEAAFTCSADCTIRKWDVLT 523
           L++G+ D T ++W    GQC   LQG   H+S VT  Q       T S D T++ WD+ T
Sbjct: 514 LVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLWDLKT 573

Query: 524 GQCLQVF-----RGHTSIVNRILVTNNQL 595
           G+ ++        G   +V RI  +N +L
Sbjct: 574 GEFIRNLVTLESGGSGGVVWRIRASNTKL 602


>ref|XP_537775.2| PREDICTED: similar to platelet-activating factor acetylhydrolase
           beta subunit isoform 1 [Canis familiaris].
          Length = 372

 Score =  101 bits (251), Expect = 1e-21
 Identities = 66/228 (28%), Positives = 105/228 (46%), Gaps = 12/228 (5%)
 Frame = +2

Query: 278 GSALRVCADHRGGINWLSLSPDGQRLLTGSEDGTARLWSTADGQCCALLQGHESYVTFCQ 457
           G   R    H   +  +S    G+ L + S D T +LW     +C   + GH+  V+   
Sbjct: 102 GDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVA 161

Query: 458 L--EDEAAFTCSADCTIRKWDVLTGQCLQVFRGHTSIVNRILVTNNQ----LFSSSYDRT 619
           +    +   + S D TI+ W+V TG C++ F GH   V   +V  NQ    + S S D+T
Sbjct: 162 IMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVR--MVRPNQDGTLIASCSNDQT 219

Query: 620 ARAWSVDKGQVSREFRGHRNCVLTLA------YSAPWDLPGAPCVEEAVAGGLLVTGSTD 781
            R W V   +   E R H + V  ++      YS+  +  G+   +    G  L++GS D
Sbjct: 220 VRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRD 279

Query: 782 GTAKVWQVASGCCHQTLRGHTGAVLCLVLDTPGHTAFTGSNDATIRAW 925
            T K+W V++G C  TL GH   V  ++  + G    + ++D T+R W
Sbjct: 280 KTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVW 327



 Score = 71.6 bits (174), Expect = 1e-12
 Identities = 53/201 (26%), Positives = 82/201 (40%), Gaps = 26/201 (12%)
 Frame = +2

Query: 278 GSALRVCADHRGGINWLSLSPDGQRLLTGSEDGTARLWSTADGQCCALLQGHESYVTFCQ 457
           G  ++    HR  +  +  + DG  + + S D T R+W  A  +C A L+ HE  V    
Sbjct: 186 GYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECIS 245

Query: 458 LEDEAAFTC----------------------SADCTIRKWDVLTGQCLQVFRGHTSIVNR 571
              E++++                       S D TI+ WDV TG CL    GH + V  
Sbjct: 246 WAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRG 305

Query: 572 ILVTNNQLF--SSSYDRTARAWSVDKGQVSREFRGHRNCVLTLAY--SAPWDLPGAPCVE 739
           +L  +   F  S + D+T R W     +  +    H + V +L +  +AP+         
Sbjct: 306 VLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPY--------- 356

Query: 740 EAVAGGLLVTGSTDGTAKVWQ 802
                  +VTGS D T KVW+
Sbjct: 357 -------VVTGSVDQTVKVWE 370



 Score = 68.2 bits (165), Expect = 1e-11
 Identities = 53/172 (30%), Positives = 74/172 (43%), Gaps = 4/172 (2%)
 Frame = +2

Query: 422 LQGHESYVTFCQLEDEAAFTCSA--DCTIRKWDVLTGQCLQVFRGHTSIVNRILV--TNN 589
           L GH S VT        +   SA  D TI+ WD  TG   +  +GHT  V  I    +  
Sbjct: 66  LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK 125

Query: 590 QLFSSSYDRTARAWSVDKGQVSREFRGHRNCVLTLAYSAPWDLPGAPCVEEAVAGGLLVT 769
            L S S D T + W     +  R   GH + V ++A      +P          G  +V+
Sbjct: 126 LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAI-----MPN---------GDHIVS 171

Query: 770 GSTDGTAKVWQVASGCCHQTLRGHTGAVLCLVLDTPGHTAFTGSNDATIRAW 925
            S D T K+W+V +G C +T  GH   V  +  +  G    + SND T+R W
Sbjct: 172 ASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVW 223


>ref|XP_854482.1| PREDICTED: similar to platelet-activating factor acetylhydrolase
           beta subunit isoform 2 [Canis familiaris].
          Length = 410

 Score =  101 bits (251), Expect = 1e-21
 Identities = 66/228 (28%), Positives = 105/228 (46%), Gaps = 12/228 (5%)
 Frame = +2

Query: 278 GSALRVCADHRGGINWLSLSPDGQRLLTGSEDGTARLWSTADGQCCALLQGHESYVTFCQ 457
           G   R    H   +  +S    G+ L + S D T +LW     +C   + GH+  V+   
Sbjct: 140 GDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVA 199

Query: 458 L--EDEAAFTCSADCTIRKWDVLTGQCLQVFRGHTSIVNRILVTNNQ----LFSSSYDRT 619
           +    +   + S D TI+ W+V TG C++ F GH   V   +V  NQ    + S S D+T
Sbjct: 200 IMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVR--MVRPNQDGTLIASCSNDQT 257

Query: 620 ARAWSVDKGQVSREFRGHRNCVLTLA------YSAPWDLPGAPCVEEAVAGGLLVTGSTD 781
            R W V   +   E R H + V  ++      YS+  +  G+   +    G  L++GS D
Sbjct: 258 VRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRD 317

Query: 782 GTAKVWQVASGCCHQTLRGHTGAVLCLVLDTPGHTAFTGSNDATIRAW 925
            T K+W V++G C  TL GH   V  ++  + G    + ++D T+R W
Sbjct: 318 KTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVW 365



 Score = 71.6 bits (174), Expect = 1e-12
 Identities = 53/201 (26%), Positives = 82/201 (40%), Gaps = 26/201 (12%)
 Frame = +2

Query: 278 GSALRVCADHRGGINWLSLSPDGQRLLTGSEDGTARLWSTADGQCCALLQGHESYVTFCQ 457
           G  ++    HR  +  +  + DG  + + S D T R+W  A  +C A L+ HE  V    
Sbjct: 224 GYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECIS 283

Query: 458 LEDEAAFTC----------------------SADCTIRKWDVLTGQCLQVFRGHTSIVNR 571
              E++++                       S D TI+ WDV TG CL    GH + V  
Sbjct: 284 WAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRG 343

Query: 572 ILVTNNQLF--SSSYDRTARAWSVDKGQVSREFRGHRNCVLTLAY--SAPWDLPGAPCVE 739
           +L  +   F  S + D+T R W     +  +    H + V +L +  +AP+         
Sbjct: 344 VLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPY--------- 394

Query: 740 EAVAGGLLVTGSTDGTAKVWQ 802
                  +VTGS D T KVW+
Sbjct: 395 -------VVTGSVDQTVKVWE 408



 Score = 68.2 bits (165), Expect = 1e-11
 Identities = 53/172 (30%), Positives = 74/172 (43%), Gaps = 4/172 (2%)
 Frame = +2

Query: 422 LQGHESYVTFCQLEDEAAFTCSA--DCTIRKWDVLTGQCLQVFRGHTSIVNRILV--TNN 589
           L GH S VT        +   SA  D TI+ WD  TG   +  +GHT  V  I    +  
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK 163

Query: 590 QLFSSSYDRTARAWSVDKGQVSREFRGHRNCVLTLAYSAPWDLPGAPCVEEAVAGGLLVT 769
            L S S D T + W     +  R   GH + V ++A      +P          G  +V+
Sbjct: 164 LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAI-----MPN---------GDHIVS 209

Query: 770 GSTDGTAKVWQVASGCCHQTLRGHTGAVLCLVLDTPGHTAFTGSNDATIRAW 925
            S D T K+W+V +G C +T  GH   V  +  +  G    + SND T+R W
Sbjct: 210 ASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVW 261


>ref|XP_868508.1| PREDICTED: similar to platelet-activating factor acetylhydrolase
           beta subunit isoform 3 [Canis familiaris].
          Length = 345

 Score =  101 bits (251), Expect = 1e-21
 Identities = 66/228 (28%), Positives = 105/228 (46%), Gaps = 12/228 (5%)
 Frame = +2

Query: 278 GSALRVCADHRGGINWLSLSPDGQRLLTGSEDGTARLWSTADGQCCALLQGHESYVTFCQ 457
           G   R    H   +  +S    G+ L + S D T +LW     +C   + GH+  V+   
Sbjct: 75  GDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVA 134

Query: 458 L--EDEAAFTCSADCTIRKWDVLTGQCLQVFRGHTSIVNRILVTNNQ----LFSSSYDRT 619
           +    +   + S D TI+ W+V TG C++ F GH   V   +V  NQ    + S S D+T
Sbjct: 135 IMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVR--MVRPNQDGTLIASCSNDQT 192

Query: 620 ARAWSVDKGQVSREFRGHRNCVLTLA------YSAPWDLPGAPCVEEAVAGGLLVTGSTD 781
            R W V   +   E R H + V  ++      YS+  +  G+   +    G  L++GS D
Sbjct: 193 VRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRD 252

Query: 782 GTAKVWQVASGCCHQTLRGHTGAVLCLVLDTPGHTAFTGSNDATIRAW 925
            T K+W V++G C  TL GH   V  ++  + G    + ++D T+R W
Sbjct: 253 KTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVW 300



 Score = 71.6 bits (174), Expect = 1e-12
 Identities = 53/201 (26%), Positives = 82/201 (40%), Gaps = 26/201 (12%)
 Frame = +2

Query: 278 GSALRVCADHRGGINWLSLSPDGQRLLTGSEDGTARLWSTADGQCCALLQGHESYVTFCQ 457
           G  ++    HR  +  +  + DG  + + S D T R+W  A  +C A L+ HE  V    
Sbjct: 159 GYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECIS 218

Query: 458 LEDEAAFTC----------------------SADCTIRKWDVLTGQCLQVFRGHTSIVNR 571
              E++++                       S D TI+ WDV TG CL    GH + V  
Sbjct: 219 WAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRG 278

Query: 572 ILVTNNQLF--SSSYDRTARAWSVDKGQVSREFRGHRNCVLTLAY--SAPWDLPGAPCVE 739
           +L  +   F  S + D+T R W     +  +    H + V +L +  +AP+         
Sbjct: 279 VLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPY--------- 329

Query: 740 EAVAGGLLVTGSTDGTAKVWQ 802
                  +VTGS D T KVW+
Sbjct: 330 -------VVTGSVDQTVKVWE 343



 Score = 68.2 bits (165), Expect = 1e-11
 Identities = 53/172 (30%), Positives = 74/172 (43%), Gaps = 4/172 (2%)
 Frame = +2

Query: 422 LQGHESYVTFCQLEDEAAFTCSA--DCTIRKWDVLTGQCLQVFRGHTSIVNRILV--TNN 589
           L GH S VT        +   SA  D TI+ WD  TG   +  +GHT  V  I    +  
Sbjct: 39  LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK 98

Query: 590 QLFSSSYDRTARAWSVDKGQVSREFRGHRNCVLTLAYSAPWDLPGAPCVEEAVAGGLLVT 769
            L S S D T + W     +  R   GH + V ++A      +P          G  +V+
Sbjct: 99  LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAI-----MPN---------GDHIVS 144

Query: 770 GSTDGTAKVWQVASGCCHQTLRGHTGAVLCLVLDTPGHTAFTGSNDATIRAW 925
            S D T K+W+V +G C +T  GH   V  +  +  G    + SND T+R W
Sbjct: 145 ASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVW 196


>ref|XP_866627.1| PREDICTED: similar to F-box/WD-repeat protein 11 (F-box/WD-repeat
           protein 1B) (F-box and WD-repeats protein beta-TrCP2)
           isoform 8 [Canis familiaris].
          Length = 542

 Score = 97.1 bits (240), Expect = 2e-20
 Identities = 61/216 (28%), Positives = 95/216 (43%), Gaps = 3/216 (1%)
 Frame = +2

Query: 287 LRVCADHRGGINWLSLSPDGQRLLTGSEDGTARLWSTADGQCCALLQGHESYVTFCQLED 466
           L+V   H G +  L L  D + ++TGS D T R+W    G+    L  H   V   +  +
Sbjct: 273 LKVLTGHTGSV--LCLQYDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSN 330

Query: 467 EAAFTCSADCTIRKWDVLTGQCL---QVFRGHTSIVNRILVTNNQLFSSSYDRTARAWSV 637
               TCS D +I  WD+ +   +   +V  GH + VN +   +  + S+S DRT + WS 
Sbjct: 331 GLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWST 390

Query: 638 DKGQVSREFRGHRNCVLTLAYSAPWDLPGAPCVEEAVAGGLLVTGSTDGTAKVWQVASGC 817
              +  R   GH+  +  L Y                   L+V+GS+D T ++W +  G 
Sbjct: 391 STCEFVRTLNGHKRGIACLQY----------------RDRLVVSGSSDNTIRLWDIECGA 434

Query: 818 CHQTLRGHTGAVLCLVLDTPGHTAFTGSNDATIRAW 925
           C + L GH   V C+  D       +G+ D  I+ W
Sbjct: 435 CLRVLEGHEELVRCIRFD--NKRIVSGAYDGKIKVW 468



 Score = 74.3 bits (181), Expect = 1e-13
 Identities = 37/116 (31%), Positives = 59/116 (50%)
 Frame = +2

Query: 290 RVCADHRGGINWLSLSPDGQRLLTGSEDGTARLWSTADGQCCALLQGHESYVTFCQLEDE 469
           RV   HR  +N +    D + +++ S D T ++WST+  +    L GH+  +   Q  D 
Sbjct: 357 RVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDR 414

Query: 470 AAFTCSADCTIRKWDVLTGQCLQVFRGHTSIVNRILVTNNQLFSSSYDRTARAWSV 637
              + S+D TIR WD+  G CL+V  GH  +V  I   N ++ S +YD   + W +
Sbjct: 415 LVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDL 470



 Score = 68.6 bits (166), Expect = 8e-12
 Identities = 57/228 (25%), Positives = 87/228 (38%), Gaps = 12/228 (5%)
 Frame = +2

Query: 278 GSALRVCADHRGGINWLSLSPDGQRLLTGSEDGTARLWSTADGQCCAL---LQGHESYVT 448
           G  L     H   +  L  S     ++T S+D +  +W  A      L   L GH + V 
Sbjct: 310 GEVLNTLIHHNEAVLHLRFS--NGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVN 367

Query: 449 FCQLEDEAAFTCSADCTIRKWDVLTGQCLQVFRGHTSIVNRILVTNNQLFSSSYDRTARA 628
               +D+   + S D TI+ W   T + ++   GH   +  +   +  + S S D T R 
Sbjct: 368 VVDFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRL 427

Query: 629 WSVDKGQVSREFRGHRNCVLTLAYSAPWDLPGAPCVEEAVAGGLLVTGSTDGTAKVWQV- 805
           W ++ G   R   GH   V  + +                    +V+G+ DG  KVW + 
Sbjct: 428 WDIECGACLRVLEGHEELVRCIRFD----------------NKRIVSGAYDGKIKVWDLQ 471

Query: 806 --------ASGCCHQTLRGHTGAVLCLVLDTPGHTAFTGSNDATIRAW 925
                   AS  C +TL  H+G V  L  D       + S+D TI  W
Sbjct: 472 AALDPRAPASTLCLRTLVEHSGRVFRLQFDE--FQIISSSHDDTILIW 517


>ref|XP_852961.1| PREDICTED: similar to F-box and WD-40 domain protein 11 isoform 2
           [Canis familiaris].
          Length = 563

 Score = 97.1 bits (240), Expect = 2e-20
 Identities = 61/216 (28%), Positives = 95/216 (43%), Gaps = 3/216 (1%)
 Frame = +2

Query: 287 LRVCADHRGGINWLSLSPDGQRLLTGSEDGTARLWSTADGQCCALLQGHESYVTFCQLED 466
           L+V   H G +  L L  D + ++TGS D T R+W    G+    L  H   V   +  +
Sbjct: 294 LKVLTGHTGSV--LCLQYDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSN 351

Query: 467 EAAFTCSADCTIRKWDVLTGQCL---QVFRGHTSIVNRILVTNNQLFSSSYDRTARAWSV 637
               TCS D +I  WD+ +   +   +V  GH + VN +   +  + S+S DRT + WS 
Sbjct: 352 GLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWST 411

Query: 638 DKGQVSREFRGHRNCVLTLAYSAPWDLPGAPCVEEAVAGGLLVTGSTDGTAKVWQVASGC 817
              +  R   GH+  +  L Y                   L+V+GS+D T ++W +  G 
Sbjct: 412 STCEFVRTLNGHKRGIACLQY----------------RDRLVVSGSSDNTIRLWDIECGA 455

Query: 818 CHQTLRGHTGAVLCLVLDTPGHTAFTGSNDATIRAW 925
           C + L GH   V C+  D       +G+ D  I+ W
Sbjct: 456 CLRVLEGHEELVRCIRFD--NKRIVSGAYDGKIKVW 489



 Score = 74.3 bits (181), Expect = 1e-13
 Identities = 37/116 (31%), Positives = 59/116 (50%)
 Frame = +2

Query: 290 RVCADHRGGINWLSLSPDGQRLLTGSEDGTARLWSTADGQCCALLQGHESYVTFCQLEDE 469
           RV   HR  +N +    D + +++ S D T ++WST+  +    L GH+  +   Q  D 
Sbjct: 378 RVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDR 435

Query: 470 AAFTCSADCTIRKWDVLTGQCLQVFRGHTSIVNRILVTNNQLFSSSYDRTARAWSV 637
              + S+D TIR WD+  G CL+V  GH  +V  I   N ++ S +YD   + W +
Sbjct: 436 LVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDL 491



 Score = 68.6 bits (166), Expect = 8e-12
 Identities = 57/228 (25%), Positives = 87/228 (38%), Gaps = 12/228 (5%)
 Frame = +2

Query: 278 GSALRVCADHRGGINWLSLSPDGQRLLTGSEDGTARLWSTADGQCCAL---LQGHESYVT 448
           G  L     H   +  L  S     ++T S+D +  +W  A      L   L GH + V 
Sbjct: 331 GEVLNTLIHHNEAVLHLRFS--NGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVN 388

Query: 449 FCQLEDEAAFTCSADCTIRKWDVLTGQCLQVFRGHTSIVNRILVTNNQLFSSSYDRTARA 628
               +D+   + S D TI+ W   T + ++   GH   +  +   +  + S S D T R 
Sbjct: 389 VVDFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRL 448

Query: 629 WSVDKGQVSREFRGHRNCVLTLAYSAPWDLPGAPCVEEAVAGGLLVTGSTDGTAKVWQV- 805
           W ++ G   R   GH   V  + +                    +V+G+ DG  KVW + 
Sbjct: 449 WDIECGACLRVLEGHEELVRCIRFD----------------NKRIVSGAYDGKIKVWDLQ 492

Query: 806 --------ASGCCHQTLRGHTGAVLCLVLDTPGHTAFTGSNDATIRAW 925
                   AS  C +TL  H+G V  L  D       + S+D TI  W
Sbjct: 493 AALDPRAPASTLCLRTLVEHSGRVFRLQFDE--FQIISSSHDDTILIW 538


  Database: RefSeq49_CP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 18,874,504
  Number of sequences in database:  33,336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33336
Number of Hits to DB: 39,300,226
Number of extensions: 1267372
Number of successful extensions: 11856
Number of sequences better than 1.0e-05: 128
Number of HSP's gapped: 10505
Number of HSP's successfully gapped: 332
Length of query: 308
Length of database: 18,874,504
Length adjustment: 102
Effective length of query: 206
Effective length of database: 15,474,232
Effective search space: 3187691792
Effective search space used: 3187691792
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-013843
         (926 letters)

Database: RefSeq49_SP.fasta 
           24,897 sequences; 11,343,932 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|XP_003360116.1| PREDICTED: vegetative incompatibility protei...   242   2e-64
Alignment   gi|XP_003353713.1| PREDICTED: WD repeat-containing protein 38-l...   134   7e-32
Alignment   gi|XP_001927805.1| PREDICTED: WD repeat-containing protein 38-l...   134   7e-32
Alignment   gi|XP_003362067.1| PREDICTED: f-box/WD repeat-containing protei...   124   1e-28
Alignment   gi|XP_003362066.1| PREDICTED: f-box/WD repeat-containing protei...   124   1e-28
Alignment   gi|XP_003362065.1| PREDICTED: f-box/WD repeat-containing protei...   124   1e-28
Alignment   gi|XP_001929370.2| PREDICTED: transcription initiation factor T...   108   3e-24
Alignment   gi|XP_003353752.1| PREDICTED: WD repeat-containing protein 5 [S...   101   7e-22
Alignment   gi|NP_999415.1| platelet-activating factor acetylhydrolase IB s...   100   9e-22
Alignment   gi|XP_001924863.3| PREDICTED: f-box/WD repeat-containing protei...    93   2e-19

>ref|XP_003360116.1| PREDICTED: vegetative incompatibility protein HET-E-1-like [Sus
           scrofa].
          Length = 361

 Score =  242 bits (617), Expect = 2e-64
 Identities = 118/143 (82%), Positives = 118/143 (82%)
 Frame = +2

Query: 2   YCSAPGSRERTARGYEGAQFXXXXXXXXXXXXIWVFQRAPRDASAQXXXXXXXXXXXXXA 181
           YCSAPGSRERTARGYEGAQF            IWVFQRAPRDASAQ             A
Sbjct: 44  YCSAPGSRERTARGYEGAQFPGSPESPTPGEEIWVFQRAPRDASAQEPGAGAPRWPRAAA 103

Query: 182 LGSCCRVGAGAPLPSGAQPAPGPRPTSRMGGGGSALRVCADHRGGINWLSLSPDGQRLLT 361
           LGSCCRVGAGAPLPSGAQPAPGPRPTSRMGGGGSALRVCADHRGGINWLSLSPDGQRLLT
Sbjct: 104 LGSCCRVGAGAPLPSGAQPAPGPRPTSRMGGGGSALRVCADHRGGINWLSLSPDGQRLLT 163

Query: 362 GSEDGTARLWSTADGQCCALLQG 430
           GSEDGTARLWSTADGQCCALLQG
Sbjct: 164 GSEDGTARLWSTADGQCCALLQG 186


>ref|XP_003353713.1| PREDICTED: WD repeat-containing protein 38-like [Sus scrofa].
          Length = 312

 Score =  134 bits (337), Expect = 7e-32
 Identities = 81/214 (37%), Positives = 106/214 (49%), Gaps = 7/214 (3%)
 Frame = +2

Query: 305 HRGGINWLSLSPDGQRLLTGSEDGTARLWSTADGQCCALLQGHESYVTFCQLEDEAAF-- 478
           HRG +N  + SPDGQRLLT SEDG    W T  G+    L GH   V FC+   +     
Sbjct: 20  HRGEVNSSTFSPDGQRLLTASEDGCVYGWETQSGRLLWKLGGHTGPVKFCRFSPDGRLFA 79

Query: 479 TCSADCTIRKWDVLTGQCLQVFRGHTSIVNRILVT--NNQLFSSSYDRTARAWSVDKGQV 652
           + S+DCTIR WDV   +CLQV +GH   V  +  +  + QL S  +D+    W V  GQV
Sbjct: 80  STSSDCTIRLWDVAKVECLQVLKGHQRSVETVSFSPDSKQLASGGWDKRVMLWEVQSGQV 139

Query: 653 SREFRGHRNCVLTLAYSAPWDLPGAPCVEEAVAGGLLVTGSTDGTAKVWQVASG---CCH 823
            R   GHR+ + +  ++     P + C         L TGS D T ++W +  G     H
Sbjct: 140 LRHLVGHRDSIQSSDFA-----PSSDC---------LATGSWDSTIRMWDLRGGTGAIFH 185

Query: 824 QTLRGHTGAVLCLVLDTPGHTAFTGSNDATIRAW 925
           Q L GH G + CL     G  A +GS D TI  W
Sbjct: 186 QELEGHRGNISCLCFSAFGLLA-SGSWDKTIHIW 218



 Score = 81.6 bits (200), Expect = 5e-16
 Identities = 58/223 (26%), Positives = 93/223 (41%), Gaps = 7/223 (3%)
 Frame = +2

Query: 278 GSALRVCADHRGGINWLSLSPDGQRLLTGSEDGTARLWSTADGQCCALLQGHESYVTFCQ 457
           G  L     H G + +   SPDG+   + S D T RLW  A  +C  +L+GH+  V    
Sbjct: 53  GRLLWKLGGHTGPVKFCRFSPDGRLFASTSSDCTIRLWDVAKVECLQVLKGHQRSVETVS 112

Query: 458 LEDEAAFTCSA--DCTIRKWDVLTGQCLQVFRGHTSIV--NRILVTNNQLFSSSYDRTAR 625
              ++    S   D  +  W+V +GQ L+   GH   +  +    +++ L + S+D T R
Sbjct: 113 FSPDSKQLASGGWDKRVMLWEVQSGQVLRHLVGHRDSIQSSDFAPSSDCLATGSWDSTIR 172

Query: 626 AWSVDKGQ---VSREFRGHRNCVLTLAYSAPWDLPGAPCVEEAVAGGLLVTGSTDGTAKV 796
            W +  G      +E  GHR  +  L +S               A GLL +GS D T  +
Sbjct: 173 MWDLRGGTGAIFHQELEGHRGNISCLCFS---------------AFGLLASGSWDKTIHI 217

Query: 797 WQVASGCCHQTLRGHTGAVLCLVLDTPGHTAFTGSNDATIRAW 925
           W+ ++      L+GH   V  +     G    +     T++ W
Sbjct: 218 WKPSTRSLLVQLKGHVTWVKSIAFSPDGLQLASAGYSHTVKVW 260


>ref|XP_001927805.1| PREDICTED: WD repeat-containing protein 38-like [Sus scrofa].
          Length = 312

 Score =  134 bits (337), Expect = 7e-32
 Identities = 81/214 (37%), Positives = 106/214 (49%), Gaps = 7/214 (3%)
 Frame = +2

Query: 305 HRGGINWLSLSPDGQRLLTGSEDGTARLWSTADGQCCALLQGHESYVTFCQLEDEAAF-- 478
           HRG +N  + SPDGQRLLT SEDG    W T  G+    L GH   V FC+   +     
Sbjct: 20  HRGEVNSSTFSPDGQRLLTASEDGCVYGWETQSGRLLWKLGGHTGPVKFCRFSPDGRLFA 79

Query: 479 TCSADCTIRKWDVLTGQCLQVFRGHTSIVNRILVT--NNQLFSSSYDRTARAWSVDKGQV 652
           + S+DCTIR WDV   +CLQV +GH   V  +  +  + QL S  +D+    W V  GQV
Sbjct: 80  STSSDCTIRLWDVAKVECLQVLKGHQRSVETVSFSPDSKQLASGGWDKRVMLWEVQSGQV 139

Query: 653 SREFRGHRNCVLTLAYSAPWDLPGAPCVEEAVAGGLLVTGSTDGTAKVWQVASG---CCH 823
            R   GHR+ + +  ++     P + C         L TGS D T ++W +  G     H
Sbjct: 140 LRHLVGHRDSIQSSDFA-----PSSDC---------LATGSWDSTIRMWDLRGGTGAIFH 185

Query: 824 QTLRGHTGAVLCLVLDTPGHTAFTGSNDATIRAW 925
           Q L GH G + CL     G  A +GS D TI  W
Sbjct: 186 QELEGHRGNISCLCFSAFGLLA-SGSWDKTIHIW 218



 Score = 81.6 bits (200), Expect = 5e-16
 Identities = 58/223 (26%), Positives = 93/223 (41%), Gaps = 7/223 (3%)
 Frame = +2

Query: 278 GSALRVCADHRGGINWLSLSPDGQRLLTGSEDGTARLWSTADGQCCALLQGHESYVTFCQ 457
           G  L     H G + +   SPDG+   + S D T RLW  A  +C  +L+GH+  V    
Sbjct: 53  GRLLWKLGGHTGPVKFCRFSPDGRLFASTSSDCTIRLWDVAKVECLQVLKGHQRSVETVS 112

Query: 458 LEDEAAFTCSA--DCTIRKWDVLTGQCLQVFRGHTSIV--NRILVTNNQLFSSSYDRTAR 625
              ++    S   D  +  W+V +GQ L+   GH   +  +    +++ L + S+D T R
Sbjct: 113 FSPDSKQLASGGWDKRVMLWEVQSGQVLRHLVGHRDSIQSSDFAPSSDCLATGSWDSTIR 172

Query: 626 AWSVDKGQ---VSREFRGHRNCVLTLAYSAPWDLPGAPCVEEAVAGGLLVTGSTDGTAKV 796
            W +  G      +E  GHR  +  L +S               A GLL +GS D T  +
Sbjct: 173 MWDLRGGTGAIFHQELEGHRGNISCLCFS---------------AFGLLASGSWDKTIHI 217

Query: 797 WQVASGCCHQTLRGHTGAVLCLVLDTPGHTAFTGSNDATIRAW 925
           W+ ++      L+GH   V  +     G    +     T++ W
Sbjct: 218 WKPSTRSLLVQLKGHVTWVKSIAFSPDGLQLASAGYSHTVKVW 260


>ref|XP_003362067.1| PREDICTED: f-box/WD repeat-containing protein 7 isoform 3 [Sus
            scrofa].
          Length = 589

 Score =  124 bits (310), Expect = 1e-28
 Identities = 73/243 (30%), Positives = 113/243 (46%), Gaps = 27/243 (11%)
 Frame = +2

Query: 278  GSALRVCADHRGGINWLSLSPDGQRLLTGSEDGTARLWSTADGQCCALLQGHESYVTFCQ 457
            G  LR    H GG+ W S   D   +++GS D T ++W+   G+C   L GH S V    
Sbjct: 293  GKCLRTLVGHTGGV-WSSQMRDNI-IISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMH 350

Query: 458  LEDEAAFTCSADCTIRKWDVLTGQCLQVFRGHTSIVNRILVTNNQLFSSSYDRTARAWSV 637
            L ++   + S D T+R WD+ TGQCL V  GH + V  +     ++ S +YD   + W  
Sbjct: 351  LHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDP 410

Query: 638  DKGQVSREFRGHRNCVLTLAYSA-------------PWDLPGAPCV-----EEAVAGG-- 757
            +        +GH N V +L +                WD+    C+      +++  G  
Sbjct: 411  ETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGME 470

Query: 758  ----LLVTGSTDGTAKVWQVASGCCHQTLRG---HTGAVLCLVLDTPGHTAFTGSNDATI 916
                +LV+G+ D T K+W + +G C QTL+G   H  AV CL  +   +   T S+D T+
Sbjct: 471  LKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNK--NFVITSSDDGTV 528

Query: 917  RAW 925
            + W
Sbjct: 529  KLW 531



 Score =  106 bits (265), Expect = 2e-23
 Identities = 61/189 (32%), Positives = 87/189 (46%)
 Frame = +2

Query: 359 TGSEDGTARLWSTADGQCCALLQGHESYVTFCQLEDEAAFTCSADCTIRKWDVLTGQCLQ 538
           +GS+D T ++WS   G+C   L GH   V   Q+ D    + S D T++ W+  TG+C+ 
Sbjct: 278 SGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDNIIISGSTDRTLKVWNAETGECIH 337

Query: 539 VFRGHTSIVNRILVTNNQLFSSSYDRTARAWSVDKGQVSREFRGHRNCVLTLAYSAPWDL 718
              GHTS V  + +   ++ S S D T R W ++ GQ      GH   V  + Y      
Sbjct: 338 TLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYD----- 392

Query: 719 PGAPCVEEAVAGGLLVTGSTDGTAKVWQVASGCCHQTLRGHTGAVLCLVLDTPGHTAFTG 898
                      G  +V+G+ D   KVW   +  C  TL+GHT  V  L  D  G    +G
Sbjct: 393 -----------GRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFD--GIHVVSG 439

Query: 899 SNDATIRAW 925
           S D +IR W
Sbjct: 440 SLDTSIRVW 448



 Score = 86.3 bits (212), Expect = 2e-17
 Identities = 50/182 (27%), Positives = 83/182 (45%), Gaps = 3/182 (1%)
 Frame = +2

Query: 278 GSALRVCADHRGGINWLSLSPDGQRLLTGSEDGTARLWSTADGQCCALLQGHESYVTFCQ 457
           G  L V   H   +  +    DG+R+++G+ D   ++W      C   LQGH + V   Q
Sbjct: 373 GQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQ 430

Query: 458 LEDEAAFTCSADCTIRKWDVLTGQCLQVFRGHTSIVNRILVTNNQLFSSSYDRTARAWSV 637
            +     + S D +IR WDV TG C+    GH S+ + + + +N L S + D T + W +
Sbjct: 431 FDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNILVSGNADSTVKIWDI 490

Query: 638 DKGQVSREFRG---HRNCVLTLAYSAPWDLPGAPCVEEAVAGGLLVTGSTDGTAKVWQVA 808
             GQ  +  +G   H++ V  L ++                   ++T S DGT K+W + 
Sbjct: 491 KTGQCLQTLQGPNKHQSAVTCLQFNK----------------NFVITSSDDGTVKLWDLK 534

Query: 809 SG 814
           +G
Sbjct: 535 TG 536



 Score = 52.4 bits (124), Expect = 4e-07
 Identities = 30/89 (33%), Positives = 45/89 (50%), Gaps = 8/89 (8%)
 Frame = +2

Query: 353 LLTGSEDGTARLWSTADGQCCALLQG---HESYVTFCQLEDEAAFTCSADCTIRKWDVLT 523
           L++G+ D T ++W    GQC   LQG   H+S VT  Q       T S D T++ WD+ T
Sbjct: 476 LVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLWDLKT 535

Query: 524 GQCLQVF-----RGHTSIVNRILVTNNQL 595
           G+ ++        G   +V RI  +N +L
Sbjct: 536 GEFIRNLVTLESGGSGGVVWRIRASNTKL 564


>ref|XP_003362066.1| PREDICTED: f-box/WD repeat-containing protein 7 isoform 2 [Sus
            scrofa].
          Length = 705

 Score =  124 bits (310), Expect = 1e-28
 Identities = 73/243 (30%), Positives = 113/243 (46%), Gaps = 27/243 (11%)
 Frame = +2

Query: 278  GSALRVCADHRGGINWLSLSPDGQRLLTGSEDGTARLWSTADGQCCALLQGHESYVTFCQ 457
            G  LR    H GG+ W S   D   +++GS D T ++W+   G+C   L GH S V    
Sbjct: 409  GKCLRTLVGHTGGV-WSSQMRDNI-IISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMH 466

Query: 458  LEDEAAFTCSADCTIRKWDVLTGQCLQVFRGHTSIVNRILVTNNQLFSSSYDRTARAWSV 637
            L ++   + S D T+R WD+ TGQCL V  GH + V  +     ++ S +YD   + W  
Sbjct: 467  LHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDP 526

Query: 638  DKGQVSREFRGHRNCVLTLAYSA-------------PWDLPGAPCV-----EEAVAGG-- 757
            +        +GH N V +L +                WD+    C+      +++  G  
Sbjct: 527  ETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGME 586

Query: 758  ----LLVTGSTDGTAKVWQVASGCCHQTLRG---HTGAVLCLVLDTPGHTAFTGSNDATI 916
                +LV+G+ D T K+W + +G C QTL+G   H  AV CL  +   +   T S+D T+
Sbjct: 587  LKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNK--NFVITSSDDGTV 644

Query: 917  RAW 925
            + W
Sbjct: 645  KLW 647



 Score =  106 bits (265), Expect = 2e-23
 Identities = 61/189 (32%), Positives = 87/189 (46%)
 Frame = +2

Query: 359 TGSEDGTARLWSTADGQCCALLQGHESYVTFCQLEDEAAFTCSADCTIRKWDVLTGQCLQ 538
           +GS+D T ++WS   G+C   L GH   V   Q+ D    + S D T++ W+  TG+C+ 
Sbjct: 394 SGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDNIIISGSTDRTLKVWNAETGECIH 453

Query: 539 VFRGHTSIVNRILVTNNQLFSSSYDRTARAWSVDKGQVSREFRGHRNCVLTLAYSAPWDL 718
              GHTS V  + +   ++ S S D T R W ++ GQ      GH   V  + Y      
Sbjct: 454 TLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYD----- 508

Query: 719 PGAPCVEEAVAGGLLVTGSTDGTAKVWQVASGCCHQTLRGHTGAVLCLVLDTPGHTAFTG 898
                      G  +V+G+ D   KVW   +  C  TL+GHT  V  L  D  G    +G
Sbjct: 509 -----------GRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFD--GIHVVSG 555

Query: 899 SNDATIRAW 925
           S D +IR W
Sbjct: 556 SLDTSIRVW 564



 Score = 86.3 bits (212), Expect = 2e-17
 Identities = 50/182 (27%), Positives = 83/182 (45%), Gaps = 3/182 (1%)
 Frame = +2

Query: 278 GSALRVCADHRGGINWLSLSPDGQRLLTGSEDGTARLWSTADGQCCALLQGHESYVTFCQ 457
           G  L V   H   +  +    DG+R+++G+ D   ++W      C   LQGH + V   Q
Sbjct: 489 GQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQ 546

Query: 458 LEDEAAFTCSADCTIRKWDVLTGQCLQVFRGHTSIVNRILVTNNQLFSSSYDRTARAWSV 637
            +     + S D +IR WDV TG C+    GH S+ + + + +N L S + D T + W +
Sbjct: 547 FDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNILVSGNADSTVKIWDI 606

Query: 638 DKGQVSREFRG---HRNCVLTLAYSAPWDLPGAPCVEEAVAGGLLVTGSTDGTAKVWQVA 808
             GQ  +  +G   H++ V  L ++                   ++T S DGT K+W + 
Sbjct: 607 KTGQCLQTLQGPNKHQSAVTCLQFNK----------------NFVITSSDDGTVKLWDLK 650

Query: 809 SG 814
           +G
Sbjct: 651 TG 652



 Score = 52.4 bits (124), Expect = 4e-07
 Identities = 30/89 (33%), Positives = 45/89 (50%), Gaps = 8/89 (8%)
 Frame = +2

Query: 353 LLTGSEDGTARLWSTADGQCCALLQG---HESYVTFCQLEDEAAFTCSADCTIRKWDVLT 523
           L++G+ D T ++W    GQC   LQG   H+S VT  Q       T S D T++ WD+ T
Sbjct: 592 LVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLWDLKT 651

Query: 524 GQCLQVF-----RGHTSIVNRILVTNNQL 595
           G+ ++        G   +V RI  +N +L
Sbjct: 652 GEFIRNLVTLESGGSGGVVWRIRASNTKL 680


>ref|XP_003362065.1| PREDICTED: f-box/WD repeat-containing protein 7 isoform 1 [Sus
            scrofa].
          Length = 627

 Score =  124 bits (310), Expect = 1e-28
 Identities = 73/243 (30%), Positives = 113/243 (46%), Gaps = 27/243 (11%)
 Frame = +2

Query: 278  GSALRVCADHRGGINWLSLSPDGQRLLTGSEDGTARLWSTADGQCCALLQGHESYVTFCQ 457
            G  LR    H GG+ W S   D   +++GS D T ++W+   G+C   L GH S V    
Sbjct: 331  GKCLRTLVGHTGGV-WSSQMRDNI-IISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMH 388

Query: 458  LEDEAAFTCSADCTIRKWDVLTGQCLQVFRGHTSIVNRILVTNNQLFSSSYDRTARAWSV 637
            L ++   + S D T+R WD+ TGQCL V  GH + V  +     ++ S +YD   + W  
Sbjct: 389  LHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDP 448

Query: 638  DKGQVSREFRGHRNCVLTLAYSA-------------PWDLPGAPCV-----EEAVAGG-- 757
            +        +GH N V +L +                WD+    C+      +++  G  
Sbjct: 449  ETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGME 508

Query: 758  ----LLVTGSTDGTAKVWQVASGCCHQTLRG---HTGAVLCLVLDTPGHTAFTGSNDATI 916
                +LV+G+ D T K+W + +G C QTL+G   H  AV CL  +   +   T S+D T+
Sbjct: 509  LKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNK--NFVITSSDDGTV 566

Query: 917  RAW 925
            + W
Sbjct: 567  KLW 569



 Score =  106 bits (265), Expect = 2e-23
 Identities = 61/189 (32%), Positives = 87/189 (46%)
 Frame = +2

Query: 359 TGSEDGTARLWSTADGQCCALLQGHESYVTFCQLEDEAAFTCSADCTIRKWDVLTGQCLQ 538
           +GS+D T ++WS   G+C   L GH   V   Q+ D    + S D T++ W+  TG+C+ 
Sbjct: 316 SGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDNIIISGSTDRTLKVWNAETGECIH 375

Query: 539 VFRGHTSIVNRILVTNNQLFSSSYDRTARAWSVDKGQVSREFRGHRNCVLTLAYSAPWDL 718
              GHTS V  + +   ++ S S D T R W ++ GQ      GH   V  + Y      
Sbjct: 376 TLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYD----- 430

Query: 719 PGAPCVEEAVAGGLLVTGSTDGTAKVWQVASGCCHQTLRGHTGAVLCLVLDTPGHTAFTG 898
                      G  +V+G+ D   KVW   +  C  TL+GHT  V  L  D  G    +G
Sbjct: 431 -----------GRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFD--GIHVVSG 477

Query: 899 SNDATIRAW 925
           S D +IR W
Sbjct: 478 SLDTSIRVW 486



 Score = 86.3 bits (212), Expect = 2e-17
 Identities = 50/182 (27%), Positives = 83/182 (45%), Gaps = 3/182 (1%)
 Frame = +2

Query: 278 GSALRVCADHRGGINWLSLSPDGQRLLTGSEDGTARLWSTADGQCCALLQGHESYVTFCQ 457
           G  L V   H   +  +    DG+R+++G+ D   ++W      C   LQGH + V   Q
Sbjct: 411 GQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQ 468

Query: 458 LEDEAAFTCSADCTIRKWDVLTGQCLQVFRGHTSIVNRILVTNNQLFSSSYDRTARAWSV 637
            +     + S D +IR WDV TG C+    GH S+ + + + +N L S + D T + W +
Sbjct: 469 FDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNILVSGNADSTVKIWDI 528

Query: 638 DKGQVSREFRG---HRNCVLTLAYSAPWDLPGAPCVEEAVAGGLLVTGSTDGTAKVWQVA 808
             GQ  +  +G   H++ V  L ++                   ++T S DGT K+W + 
Sbjct: 529 KTGQCLQTLQGPNKHQSAVTCLQFNK----------------NFVITSSDDGTVKLWDLK 572

Query: 809 SG 814
           +G
Sbjct: 573 TG 574



 Score = 52.4 bits (124), Expect = 4e-07
 Identities = 30/89 (33%), Positives = 45/89 (50%), Gaps = 8/89 (8%)
 Frame = +2

Query: 353 LLTGSEDGTARLWSTADGQCCALLQG---HESYVTFCQLEDEAAFTCSADCTIRKWDVLT 523
           L++G+ D T ++W    GQC   LQG   H+S VT  Q       T S D T++ WD+ T
Sbjct: 514 LVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLWDLKT 573

Query: 524 GQCLQVF-----RGHTSIVNRILVTNNQL 595
           G+ ++        G   +V RI  +N +L
Sbjct: 574 GEFIRNLVTLESGGSGGVVWRIRASNTKL 602


>ref|XP_001929370.2| PREDICTED: transcription initiation factor TFIID subunit 5 [Sus
            scrofa].
          Length = 662

 Score =  108 bits (271), Expect = 3e-24
 Identities = 73/219 (33%), Positives = 95/219 (43%), Gaps = 4/219 (1%)
 Frame = +2

Query: 281  SALRVCADHRGGINWLSLSPDGQRLLTGSEDGTARLWSTADGQCCALLQGHESYVTFCQL 460
            S L++   H G +   S SPD   LL+ SEDGT RLWS     C    +GH   V   Q 
Sbjct: 396  SELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQF 455

Query: 461  EDEAAFTCSA--DCTIRKWDVLTGQCLQVFRGHTSIVN--RILVTNNQLFSSSYDRTARA 628
                 +  S   D   R W     Q L++F GH + VN  R    +N + + S DRT R 
Sbjct: 456  SPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRL 515

Query: 629  WSVDKGQVSREFRGHRNCVLTLAYSAPWDLPGAPCVEEAVAGGLLVTGSTDGTAKVWQVA 808
            W V  G   R F GH+  + +L +S                G  L TG+TDG   +W + 
Sbjct: 516  WDVLNGNCVRIFTGHKGPIHSLTFSPN--------------GRFLATGATDGRVLLWDIG 561

Query: 809  SGCCHQTLRGHTGAVLCLVLDTPGHTAFTGSNDATIRAW 925
             G     L+GHT  V  L     G    +GS D T+R W
Sbjct: 562  HGLMVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLW 600



 Score = 53.5 bits (127), Expect = 2e-07
 Identities = 30/85 (35%), Positives = 44/85 (51%), Gaps = 4/85 (4%)
 Frame = +2

Query: 278 GSALRVCADHRGGINWLSLSPDGQRLLTGSEDGTARLWSTADGQCCALLQGHESYVTFCQ 457
           G+ +R+   H+G I+ L+ SP+G+ L TG+ DG   LW    G     L+GH    T C 
Sbjct: 521 GNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTD--TVCS 578

Query: 458 L----EDEAAFTCSADCTIRKWDVL 520
           L    + E   + S D T+R WD +
Sbjct: 579 LRFSRDGEILASGSMDNTVRLWDAV 603


>ref|XP_003353752.1| PREDICTED: WD repeat-containing protein 5 [Sus scrofa].
          Length = 334

 Score =  101 bits (251), Expect = 7e-22
 Identities = 63/223 (28%), Positives = 102/223 (45%), Gaps = 7/223 (3%)
 Frame = +2

Query: 278 GSALRVCADHRGGINWLSLSPDGQRLLTGSEDGTARLWSTADGQCCALLQGHESYVTFCQ 457
           G   +  + H+ GI+ ++ S D   L++ S+D T ++W  + G+C   L+GH +YV  C 
Sbjct: 77  GKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCN 136

Query: 458 LEDEAAFTCSA--DCTIRKWDVLTGQCLQVFRGHTSIVNRILVT--NNQLFSSSYDRTAR 625
              ++    S   D ++R WDV TG+CL+    H+  V+ +      + + SSSYD   R
Sbjct: 137 FNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCR 196

Query: 626 AWSVDKGQVSREFRGHRNCVLTLAYSAPWDLPGAPCVEEAVAGGLLVTGSTDGTAKVWQV 805
            W    GQ          C+ TL      D P    V+ +  G  ++  + D T K+W  
Sbjct: 197 IWDTASGQ----------CLKTLIDD---DNPPVSFVKFSPNGKYILAATLDNTLKLWDY 243

Query: 806 ASGCCHQTLRGHTGAVLCLVLD---TPGHTAFTGSNDATIRAW 925
           + G C +T  GH     C+  +   T G    +GS D  +  W
Sbjct: 244 SKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIW 286



 Score = 89.7 bits (221), Expect = 2e-18
 Identities = 63/243 (25%), Positives = 107/243 (44%), Gaps = 6/243 (2%)
 Frame = +2

Query: 215 PLPSGAQPAPGPRPTSRMGGGGSALR-VCADHRGGINWLSLSPDGQRLLTGSEDGTARLW 391
           P PS A     P P         AL+   A H   ++ +  SP+G+ L + S D   ++W
Sbjct: 17  PAPSAAATQSKPTPVKP----NYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIW 72

Query: 392 STADGQCCALLQGHESYVTFCQLEDEAAFTCSA--DCTIRKWDVLTGQCLQVFRGHTSIV 565
              DG+    + GH+  ++      ++    SA  D T++ WDV +G+CL+  +GH++ V
Sbjct: 73  GAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYV 132

Query: 566 --NRILVTNNQLFSSSYDRTARAWSVDKGQVSREFRGHRNCVLTLAYSAPWDLPGAPCVE 739
                   +N + S S+D + R W V  G+  +    H + V  + ++            
Sbjct: 133 FCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRD---------- 182

Query: 740 EAVAGGLLVTGSTDGTAKVWQVASGCCHQTLRGHTGAVLCLVLDTP-GHTAFTGSNDATI 916
               G L+V+ S DG  ++W  ASG C +TL       +  V  +P G      + D T+
Sbjct: 183 ----GSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTL 238

Query: 917 RAW 925
           + W
Sbjct: 239 KLW 241



 Score = 68.9 bits (167), Expect = 4e-12
 Identities = 44/183 (24%), Positives = 79/183 (43%), Gaps = 8/183 (4%)
 Frame = +2

Query: 278 GSALRVCADHRGGINWLSLSPDGQRLLTGSEDGTARLWSTADGQCC-ALLQGHESYVTFC 454
           G  L+    H   ++ +  + DG  +++ S DG  R+W TA GQC   L+      V+F 
Sbjct: 161 GKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFV 220

Query: 455 QLEDEAAFTCSA--DCTIRKWDVLTGQCLQVFRGHTS-----IVNRILVTNNQLFSSSYD 613
           +      +  +A  D T++ WD   G+CL+ + GH +       N  +     + S S D
Sbjct: 221 KFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSED 280

Query: 614 RTARAWSVDKGQVSREFRGHRNCVLTLAYSAPWDLPGAPCVEEAVAGGLLVTGSTDGTAK 793
                W++   ++ ++ +GH + V++ A             E  +A   L     D T K
Sbjct: 281 NLVYIWNLQTKEIVQKLQGHTDVVISTACHP---------TENIIASAAL---ENDKTIK 328

Query: 794 VWQ 802
           +W+
Sbjct: 329 LWK 331



 Score = 49.7 bits (117), Expect = 2e-06
 Identities = 30/122 (24%), Positives = 58/122 (47%), Gaps = 9/122 (7%)
 Frame = +2

Query: 302 DHRGGINWLSLSPDGQRLLTGSEDGTARLWSTADGQCCALLQGHES-----YVTFCQLED 466
           D    ++++  SP+G+ +L  + D T +LW  + G+C     GH++     +  F     
Sbjct: 212 DDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGG 271

Query: 467 EAAFTCSADCTIRKWDVLTGQCLQVFRGHTSIV--NRILVTNNQLFSSSY--DRTARAWS 634
           +   + S D  +  W++ T + +Q  +GHT +V       T N + S++   D+T + W 
Sbjct: 272 KWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLWK 331

Query: 635 VD 640
            D
Sbjct: 332 SD 333


>ref|NP_999415.1| platelet-activating factor acetylhydrolase IB subunit alpha [Sus
           scrofa].
          Length = 410

 Score =  100 bits (250), Expect = 9e-22
 Identities = 67/228 (29%), Positives = 104/228 (45%), Gaps = 12/228 (5%)
 Frame = +2

Query: 278 GSALRVCADHRGGINWLSLSPDGQRLLTGSEDGTARLWSTADGQCCALLQGHESYVTFCQ 457
           G   R    H   +  +S    G+ L + S D T +LW     +C   + GH+  V+   
Sbjct: 140 GDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVA 199

Query: 458 LEDEAAFTCSA--DCTIRKWDVLTGQCLQVFRGHTSIVNRILVTNNQ----LFSSSYDRT 619
           +        SA  D TI+ W+V TG C++ F GH   V   +V  NQ    + S S D+T
Sbjct: 200 IMPNGDHIVSAARDKTIKMWEVQTGYCVKTFTGHREWVR--MVRPNQDGTLIASCSNDQT 257

Query: 620 ARAWSVDKGQVSREFRGHRNCVLTLA------YSAPWDLPGAPCVEEAVAGGLLVTGSTD 781
            R W V   +   E R H + V  ++      YS+  +  G+   +    G  L++GS D
Sbjct: 258 VRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRD 317

Query: 782 GTAKVWQVASGCCHQTLRGHTGAVLCLVLDTPGHTAFTGSNDATIRAW 925
            T K+W V++G C  TL GH   V  ++  + G    + ++D T+R W
Sbjct: 318 KTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVW 365



 Score = 71.6 bits (174), Expect = 6e-13
 Identities = 53/201 (26%), Positives = 82/201 (40%), Gaps = 26/201 (12%)
 Frame = +2

Query: 278 GSALRVCADHRGGINWLSLSPDGQRLLTGSEDGTARLWSTADGQCCALLQGHESYVTFCQ 457
           G  ++    HR  +  +  + DG  + + S D T R+W  A  +C A L+ HE  V    
Sbjct: 224 GYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECIS 283

Query: 458 LEDEAAFTC----------------------SADCTIRKWDVLTGQCLQVFRGHTSIVNR 571
              E++++                       S D TI+ WDV TG CL    GH + V  
Sbjct: 284 WAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRG 343

Query: 572 ILVTNNQLF--SSSYDRTARAWSVDKGQVSREFRGHRNCVLTLAY--SAPWDLPGAPCVE 739
           +L  +   F  S + D+T R W     +  +    H + V +L +  +AP+         
Sbjct: 344 VLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPY--------- 394

Query: 740 EAVAGGLLVTGSTDGTAKVWQ 802
                  +VTGS D T KVW+
Sbjct: 395 -------VVTGSVDQTVKVWE 408



 Score = 67.0 bits (162), Expect = 1e-11
 Identities = 52/172 (30%), Positives = 74/172 (43%), Gaps = 4/172 (2%)
 Frame = +2

Query: 422 LQGHESYVTFCQLEDEAAFTCSA--DCTIRKWDVLTGQCLQVFRGHTSIVNRILV--TNN 589
           L GH S VT        +   SA  D TI+ WD  TG   +  +GHT  V  I    +  
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK 163

Query: 590 QLFSSSYDRTARAWSVDKGQVSREFRGHRNCVLTLAYSAPWDLPGAPCVEEAVAGGLLVT 769
            L S S D T + W     +  R   GH + V ++A      +P          G  +V+
Sbjct: 164 LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAI-----MPN---------GDHIVS 209

Query: 770 GSTDGTAKVWQVASGCCHQTLRGHTGAVLCLVLDTPGHTAFTGSNDATIRAW 925
            + D T K+W+V +G C +T  GH   V  +  +  G    + SND T+R W
Sbjct: 210 AARDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVW 261


>ref|XP_001924863.3| PREDICTED: f-box/WD repeat-containing protein 1A, partial [Sus
           scrofa].
          Length = 497

 Score = 93.2 bits (230), Expect = 2e-19
 Identities = 59/215 (27%), Positives = 94/215 (43%), Gaps = 3/215 (1%)
 Frame = +2

Query: 290 RVCADHRGGINWLSLSPDGQRLLTGSEDGTARLWSTADGQCCALLQGHESYVTFCQLEDE 469
           R+   H G +  L L  D + ++TGS D T R+W    G+    L  H   V   +  + 
Sbjct: 229 RILTGHTGSV--LCLQYDERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNG 286

Query: 470 AAFTCSADCTIRKWDVLTGQCL---QVFRGHTSIVNRILVTNNQLFSSSYDRTARAWSVD 640
              TCS D +I  WD+ +   +   +V  GH + VN +   +  + S+S DRT + W+  
Sbjct: 287 MMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTS 346

Query: 641 KGQVSREFRGHRNCVLTLAYSAPWDLPGAPCVEEAVAGGLLVTGSTDGTAKVWQVASGCC 820
             +  R   GH+  +  L Y                   L+V+GS+D T ++W +  G C
Sbjct: 347 TCEFVRTLNGHKRGIACLQY----------------RDRLVVSGSSDNTIRLWDIECGAC 390

Query: 821 HQTLRGHTGAVLCLVLDTPGHTAFTGSNDATIRAW 925
            + L GH   V C+  D       +G+ D  I+ W
Sbjct: 391 LRVLEGHEELVRCIRFD--NKRIVSGAYDGKIKVW 423



 Score = 73.2 bits (178), Expect = 2e-13
 Identities = 36/116 (31%), Positives = 59/116 (50%)
 Frame = +2

Query: 290 RVCADHRGGINWLSLSPDGQRLLTGSEDGTARLWSTADGQCCALLQGHESYVTFCQLEDE 469
           RV   HR  +N +    D + +++ S D T ++W+T+  +    L GH+  +   Q  D 
Sbjct: 312 RVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYRDR 369

Query: 470 AAFTCSADCTIRKWDVLTGQCLQVFRGHTSIVNRILVTNNQLFSSSYDRTARAWSV 637
              + S+D TIR WD+  G CL+V  GH  +V  I   N ++ S +YD   + W +
Sbjct: 370 LVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDL 425


  Database: RefSeq49_SP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 11,343,932
  Number of sequences in database:  24,897
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 24897
Number of Hits to DB: 24,874,935
Number of extensions: 861899
Number of successful extensions: 7371
Number of sequences better than 1.0e-05: 82
Number of HSP's gapped: 6596
Number of HSP's successfully gapped: 184
Length of query: 308
Length of database: 11,343,932
Length adjustment: 99
Effective length of query: 209
Effective length of database: 8,879,129
Effective search space: 1855737961
Effective search space used: 1855737961
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 33 (17.3 bits)

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-013843
         (926 letters)

Database: RefSeq49_MP.fasta 
           30,036 sequences; 15,617,559 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_001074910.1| WD repeat domain 86 [Mus musculus].               410   e-115
Alignment   gi|NP_536353.2| F-box/WD repeat-containing protein 7 isoform 2 ...   112   5e-25
Alignment   gi|NP_001171245.1| F-box/WD repeat-containing protein 7 isoform...   112   5e-25
Alignment   gi|NP_001171244.1| F-box/WD repeat-containing protein 7 isoform...   112   5e-25
Alignment   gi|NP_796316.2| transcription initiation factor TFIID subunit 5...   108   4e-24
Alignment   gi|NP_083963.1| WD repeat-containing protein 38 [Mus musculus].      106   3e-23
Alignment   gi|NP_543124.1| WD repeat-containing protein 5 [Mus musculus].       101   9e-22
Alignment   gi|NP_038653.1| platelet-activating factor acetylhydrolase IB s...   101   9e-22
Alignment   gi|NP_598776.1| F-box/WD repeat-containing protein 11 [Mus musc...    97   2e-20
Alignment   gi|NP_081389.1| WD repeat-containing protein 5B [Mus musculus].       94   1e-19

>ref|NP_001074910.1| WD repeat domain 86 [Mus musculus].
          Length = 380

 Score =  410 bits (1054), Expect = e-115
 Identities = 193/220 (87%), Positives = 202/220 (91%)
 Frame = +2

Query: 266 MGGGGSALRVCADHRGGINWLSLSPDGQRLLTGSEDGTARLWSTADGQCCALLQGHESYV 445
           MG  GSALRVCADHRGGINWLSLSPDGQRLLTGSEDGTARLWST DGQCCALLQGHESYV
Sbjct: 1   MGSSGSALRVCADHRGGINWLSLSPDGQRLLTGSEDGTARLWSTVDGQCCALLQGHESYV 60

Query: 446 TFCQLEDEAAFTCSADCTIRKWDVLTGQCLQVFRGHTSIVNRILVTNNQLFSSSYDRTAR 625
           TFC LEDEAAFTCSADCTIR+WDV TGQCLQV+RGHTSIVNRILV N+QLFSSSYDRTAR
Sbjct: 61  TFCHLEDEAAFTCSADCTIRRWDVRTGQCLQVYRGHTSIVNRILVANDQLFSSSYDRTAR 120

Query: 626 AWSVDKGQVSREFRGHRNCVLTLAYSAPWDLPGAPCVEEAVAGGLLVTGSTDGTAKVWQV 805
            W+VDKGQVS+EFRGHRNCVLTLAYSAP DLP  PC+E A+ GGLLVTGS+D TAKVWQV
Sbjct: 121 VWTVDKGQVSQEFRGHRNCVLTLAYSAPEDLPQDPCMEAAMGGGLLVTGSSDDTAKVWQV 180

Query: 806 ASGCCHQTLRGHTGAVLCLVLDTPGHTAFTGSNDATIRAW 925
           ASGCCHQTLRGHTGAVLCLVL    HTAFTGS DAT+RAW
Sbjct: 181 ASGCCHQTLRGHTGAVLCLVLHVSSHTAFTGSTDATVRAW 220



 Score =  122 bits (306), Expect = 4e-28
 Identities = 72/196 (36%), Positives = 95/196 (48%), Gaps = 2/196 (1%)
 Frame = +2

Query: 344 GQRLLTGSEDGTARLWSTADGQCCALLQGHESYVTFCQLE--DEAAFTCSADCTIRKWDV 517
           G  L+TGS D TA++W  A G C   L+GH   V    L      AFT S D T+R WD+
Sbjct: 163 GGLLVTGSSDDTAKVWQVASGCCHQTLRGHTGAVLCLVLHVSSHTAFTGSTDATVRAWDI 222

Query: 518 LTGQCLQVFRGHTSIVNRILVTNNQLFSSSYDRTARAWSVDKGQVSREFRGHRNCVLTLA 697
           L+G+ L+VFR H   V  + +T+  L+S S DRT + W  D G+    F  HR+ V  L 
Sbjct: 223 LSGEQLRVFREHQGSVICLELTDRLLYSGSADRTVKCWLADTGERVLTFPAHRHSVSALK 282

Query: 698 YSAPWDLPGAPCVEEAVAGGLLVTGSTDGTAKVWQVASGCCHQTLRGHTGAVLCLVLDTP 877
           Y A                G L TGS D  A+ +   SG   +  RGHT  + C  L   
Sbjct: 283 YHA----------------GTLFTGSGDACARAFDAQSGVLQRVFRGHTFVINC--LQVH 324

Query: 878 GHTAFTGSNDATIRAW 925
           G   +T S+D  +R W
Sbjct: 325 GQVLYTASHDGALRLW 340



 Score = 76.3 bits (186), Expect = 3e-14
 Identities = 50/170 (29%), Positives = 71/170 (41%), Gaps = 3/170 (1%)
 Frame = +2

Query: 305 HRGGINWLSLSPDGQRLLTGSEDGTARLWSTADGQCCALLQGHESYVTFCQLEDEAAFTC 484
           H G +  L L        TGS D T R W    G+   + + H+  V   +L D   ++ 
Sbjct: 192 HTGAVLCLVLHVSSHTAFTGSTDATVRAWDILSGEQLRVFREHQGSVICLELTDRLLYSG 251

Query: 485 SADCTIRKWDVLTGQCLQVFRGHTSIVNRILVTNNQLFSSSYDRTARAWSVDKGQVSREF 664
           SAD T++ W   TG+ +  F  H   V+ +      LF+ S D  ARA+    G + R F
Sbjct: 252 SADRTVKCWLADTGERVLTFPAHRHSVSALKYHAGTLFTGSGDACARAFDAQSGVLQRVF 311

Query: 665 RGHR---NCVLTLAYSAPWDLPGAPCVEEAVAGGLLVTGSTDGTAKVWQV 805
           RGH    NC+                    V G +L T S DG  ++W V
Sbjct: 312 RGHTFVINCL-------------------QVHGQVLYTASHDGALRLWDV 342


>ref|NP_536353.2| F-box/WD repeat-containing protein 7 isoform 2 [Mus musculus].
          Length = 629

 Score =  112 bits (279), Expect = 5e-25
 Identities = 63/194 (32%), Positives = 91/194 (46%)
 Frame = +2

Query: 344 GQRLLTGSEDGTARLWSTADGQCCALLQGHESYVTFCQLEDEAAFTCSADCTIRKWDVLT 523
           G R+++GS+D T ++WS   G+C   L GH   V   Q+ D    + S D T++ W+  T
Sbjct: 313 GNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDNIIISGSTDRTLKVWNAET 372

Query: 524 GQCLQVFRGHTSIVNRILVTNNQLFSSSYDRTARAWSVDKGQVSREFRGHRNCVLTLAYS 703
           G+C+    GHTS V  + +   ++ S S D T R W ++ GQ      GH   V  + Y 
Sbjct: 373 GECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYD 432

Query: 704 APWDLPGAPCVEEAVAGGLLVTGSTDGTAKVWQVASGCCHQTLRGHTGAVLCLVLDTPGH 883
                           G  +V+G+ D   KVW   +  C  TL+GHT  V  L  D  G 
Sbjct: 433 ----------------GRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFD--GI 474

Query: 884 TAFTGSNDATIRAW 925
              +GS D +IR W
Sbjct: 475 HVVSGSLDTSIRVW 488



 Score =  102 bits (255), Expect = 3e-22
 Identities = 57/196 (29%), Positives = 91/196 (46%), Gaps = 3/196 (1%)
 Frame = +2

Query: 347 QRLLTGSEDGTARLWSTADGQCCALLQGHESYVTFCQLEDEAAFTCSADCTIRKWDVLTG 526
           +R+++GS D T R+W    GQC  +L GH + V   Q +     + + D  ++ WD  T 
Sbjct: 394 KRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETE 453

Query: 527 QCLQVFRGHTSIVNRILVTNNQLFSSSYDRTARAWSVDKGQVSREFRGHRNCVLTLAYSA 706
            CL   +GHT+ V  +      + S S D + R W V+ G       GH++    +    
Sbjct: 454 TCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGM---- 509

Query: 707 PWDLPGAPCVEEAVAGGLLVTGSTDGTAKVWQVASGCCHQTLRG---HTGAVLCLVLDTP 877
                        +   +LV+G+ D T K+W + +G C QTL+G   H  AV CL  +  
Sbjct: 510 ------------ELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPSKHQSAVTCLQFNK- 556

Query: 878 GHTAFTGSNDATIRAW 925
            +   T S+D T++ W
Sbjct: 557 -NFVITSSDDGTVKLW 571



 Score = 86.3 bits (212), Expect = 3e-17
 Identities = 50/182 (27%), Positives = 83/182 (45%), Gaps = 3/182 (1%)
 Frame = +2

Query: 278 GSALRVCADHRGGINWLSLSPDGQRLLTGSEDGTARLWSTADGQCCALLQGHESYVTFCQ 457
           G  L V   H   +  +    DG+R+++G+ D   ++W      C   LQGH + V   Q
Sbjct: 413 GQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQ 470

Query: 458 LEDEAAFTCSADCTIRKWDVLTGQCLQVFRGHTSIVNRILVTNNQLFSSSYDRTARAWSV 637
            +     + S D +IR WDV TG C+    GH S+ + + + +N L S + D T + W +
Sbjct: 471 FDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNILVSGNADSTVKIWDI 530

Query: 638 DKGQVSREFRG---HRNCVLTLAYSAPWDLPGAPCVEEAVAGGLLVTGSTDGTAKVWQVA 808
             GQ  +  +G   H++ V  L ++                   ++T S DGT K+W + 
Sbjct: 531 KTGQCLQTLQGPSKHQSAVTCLQFNK----------------NFVITSSDDGTVKLWDLK 574

Query: 809 SG 814
           +G
Sbjct: 575 TG 576



 Score = 66.2 bits (160), Expect = 3e-11
 Identities = 41/131 (31%), Positives = 59/131 (45%), Gaps = 1/131 (0%)
 Frame = +2

Query: 536 QVFRGHTS-IVNRILVTNNQLFSSSYDRTARAWSVDKGQVSREFRGHRNCVLTLAYSAPW 712
           +V +GH   ++  +    N++ S S D T + WS   G+  R   GH   V        W
Sbjct: 296 KVLKGHDDHVITCLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGV--------W 347

Query: 713 DLPGAPCVEEAVAGGLLVTGSTDGTAKVWQVASGCCHQTLRGHTGAVLCLVLDTPGHTAF 892
                      +   ++++GSTD T KVW   +G C  TL GHT  V C+ L        
Sbjct: 348 --------SSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHE--KRVV 397

Query: 893 TGSNDATIRAW 925
           +GS DAT+R W
Sbjct: 398 SGSRDATLRVW 408



 Score = 52.4 bits (124), Expect = 5e-07
 Identities = 30/89 (33%), Positives = 45/89 (50%), Gaps = 8/89 (8%)
 Frame = +2

Query: 353 LLTGSEDGTARLWSTADGQCCALLQG---HESYVTFCQLEDEAAFTCSADCTIRKWDVLT 523
           L++G+ D T ++W    GQC   LQG   H+S VT  Q       T S D T++ WD+ T
Sbjct: 516 LVSGNADSTVKIWDIKTGQCLQTLQGPSKHQSAVTCLQFNKNFVITSSDDGTVKLWDLKT 575

Query: 524 GQCLQVF-----RGHTSIVNRILVTNNQL 595
           G+ ++        G   +V RI  +N +L
Sbjct: 576 GEFIRNLVTLESGGSGGVVWRIRASNTKL 604


>ref|NP_001171245.1| F-box/WD repeat-containing protein 7 isoform 1 [Mus musculus].
          Length = 710

 Score =  112 bits (279), Expect = 5e-25
 Identities = 63/194 (32%), Positives = 91/194 (46%)
 Frame = +2

Query: 344 GQRLLTGSEDGTARLWSTADGQCCALLQGHESYVTFCQLEDEAAFTCSADCTIRKWDVLT 523
           G R+++GS+D T ++WS   G+C   L GH   V   Q+ D    + S D T++ W+  T
Sbjct: 394 GNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDNIIISGSTDRTLKVWNAET 453

Query: 524 GQCLQVFRGHTSIVNRILVTNNQLFSSSYDRTARAWSVDKGQVSREFRGHRNCVLTLAYS 703
           G+C+    GHTS V  + +   ++ S S D T R W ++ GQ      GH   V  + Y 
Sbjct: 454 GECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYD 513

Query: 704 APWDLPGAPCVEEAVAGGLLVTGSTDGTAKVWQVASGCCHQTLRGHTGAVLCLVLDTPGH 883
                           G  +V+G+ D   KVW   +  C  TL+GHT  V  L  D  G 
Sbjct: 514 ----------------GRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFD--GI 555

Query: 884 TAFTGSNDATIRAW 925
              +GS D +IR W
Sbjct: 556 HVVSGSLDTSIRVW 569



 Score =  102 bits (255), Expect = 3e-22
 Identities = 57/196 (29%), Positives = 91/196 (46%), Gaps = 3/196 (1%)
 Frame = +2

Query: 347  QRLLTGSEDGTARLWSTADGQCCALLQGHESYVTFCQLEDEAAFTCSADCTIRKWDVLTG 526
            +R+++GS D T R+W    GQC  +L GH + V   Q +     + + D  ++ WD  T 
Sbjct: 475  KRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETE 534

Query: 527  QCLQVFRGHTSIVNRILVTNNQLFSSSYDRTARAWSVDKGQVSREFRGHRNCVLTLAYSA 706
             CL   +GHT+ V  +      + S S D + R W V+ G       GH++    +    
Sbjct: 535  TCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGM---- 590

Query: 707  PWDLPGAPCVEEAVAGGLLVTGSTDGTAKVWQVASGCCHQTLRG---HTGAVLCLVLDTP 877
                         +   +LV+G+ D T K+W + +G C QTL+G   H  AV CL  +  
Sbjct: 591  ------------ELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPSKHQSAVTCLQFNK- 637

Query: 878  GHTAFTGSNDATIRAW 925
             +   T S+D T++ W
Sbjct: 638  -NFVITSSDDGTVKLW 652



 Score = 86.3 bits (212), Expect = 3e-17
 Identities = 50/182 (27%), Positives = 83/182 (45%), Gaps = 3/182 (1%)
 Frame = +2

Query: 278 GSALRVCADHRGGINWLSLSPDGQRLLTGSEDGTARLWSTADGQCCALLQGHESYVTFCQ 457
           G  L V   H   +  +    DG+R+++G+ D   ++W      C   LQGH + V   Q
Sbjct: 494 GQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQ 551

Query: 458 LEDEAAFTCSADCTIRKWDVLTGQCLQVFRGHTSIVNRILVTNNQLFSSSYDRTARAWSV 637
            +     + S D +IR WDV TG C+    GH S+ + + + +N L S + D T + W +
Sbjct: 552 FDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNILVSGNADSTVKIWDI 611

Query: 638 DKGQVSREFRG---HRNCVLTLAYSAPWDLPGAPCVEEAVAGGLLVTGSTDGTAKVWQVA 808
             GQ  +  +G   H++ V  L ++                   ++T S DGT K+W + 
Sbjct: 612 KTGQCLQTLQGPSKHQSAVTCLQFNK----------------NFVITSSDDGTVKLWDLK 655

Query: 809 SG 814
           +G
Sbjct: 656 TG 657



 Score = 66.2 bits (160), Expect = 3e-11
 Identities = 41/131 (31%), Positives = 59/131 (45%), Gaps = 1/131 (0%)
 Frame = +2

Query: 536 QVFRGHTS-IVNRILVTNNQLFSSSYDRTARAWSVDKGQVSREFRGHRNCVLTLAYSAPW 712
           +V +GH   ++  +    N++ S S D T + WS   G+  R   GH   V        W
Sbjct: 377 KVLKGHDDHVITCLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGV--------W 428

Query: 713 DLPGAPCVEEAVAGGLLVTGSTDGTAKVWQVASGCCHQTLRGHTGAVLCLVLDTPGHTAF 892
                      +   ++++GSTD T KVW   +G C  TL GHT  V C+ L        
Sbjct: 429 --------SSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHE--KRVV 478

Query: 893 TGSNDATIRAW 925
           +GS DAT+R W
Sbjct: 479 SGSRDATLRVW 489



 Score = 52.4 bits (124), Expect = 5e-07
 Identities = 30/89 (33%), Positives = 45/89 (50%), Gaps = 8/89 (8%)
 Frame = +2

Query: 353 LLTGSEDGTARLWSTADGQCCALLQG---HESYVTFCQLEDEAAFTCSADCTIRKWDVLT 523
           L++G+ D T ++W    GQC   LQG   H+S VT  Q       T S D T++ WD+ T
Sbjct: 597 LVSGNADSTVKIWDIKTGQCLQTLQGPSKHQSAVTCLQFNKNFVITSSDDGTVKLWDLKT 656

Query: 524 GQCLQVF-----RGHTSIVNRILVTNNQL 595
           G+ ++        G   +V RI  +N +L
Sbjct: 657 GEFIRNLVTLESGGSGGVVWRIRASNTKL 685


>ref|NP_001171244.1| F-box/WD repeat-containing protein 7 isoform 1 [Mus musculus].
          Length = 710

 Score =  112 bits (279), Expect = 5e-25
 Identities = 63/194 (32%), Positives = 91/194 (46%)
 Frame = +2

Query: 344 GQRLLTGSEDGTARLWSTADGQCCALLQGHESYVTFCQLEDEAAFTCSADCTIRKWDVLT 523
           G R+++GS+D T ++WS   G+C   L GH   V   Q+ D    + S D T++ W+  T
Sbjct: 394 GNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDNIIISGSTDRTLKVWNAET 453

Query: 524 GQCLQVFRGHTSIVNRILVTNNQLFSSSYDRTARAWSVDKGQVSREFRGHRNCVLTLAYS 703
           G+C+    GHTS V  + +   ++ S S D T R W ++ GQ      GH   V  + Y 
Sbjct: 454 GECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYD 513

Query: 704 APWDLPGAPCVEEAVAGGLLVTGSTDGTAKVWQVASGCCHQTLRGHTGAVLCLVLDTPGH 883
                           G  +V+G+ D   KVW   +  C  TL+GHT  V  L  D  G 
Sbjct: 514 ----------------GRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFD--GI 555

Query: 884 TAFTGSNDATIRAW 925
              +GS D +IR W
Sbjct: 556 HVVSGSLDTSIRVW 569



 Score =  102 bits (255), Expect = 3e-22
 Identities = 57/196 (29%), Positives = 91/196 (46%), Gaps = 3/196 (1%)
 Frame = +2

Query: 347  QRLLTGSEDGTARLWSTADGQCCALLQGHESYVTFCQLEDEAAFTCSADCTIRKWDVLTG 526
            +R+++GS D T R+W    GQC  +L GH + V   Q +     + + D  ++ WD  T 
Sbjct: 475  KRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETE 534

Query: 527  QCLQVFRGHTSIVNRILVTNNQLFSSSYDRTARAWSVDKGQVSREFRGHRNCVLTLAYSA 706
             CL   +GHT+ V  +      + S S D + R W V+ G       GH++    +    
Sbjct: 535  TCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGM---- 590

Query: 707  PWDLPGAPCVEEAVAGGLLVTGSTDGTAKVWQVASGCCHQTLRG---HTGAVLCLVLDTP 877
                         +   +LV+G+ D T K+W + +G C QTL+G   H  AV CL  +  
Sbjct: 591  ------------ELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPSKHQSAVTCLQFNK- 637

Query: 878  GHTAFTGSNDATIRAW 925
             +   T S+D T++ W
Sbjct: 638  -NFVITSSDDGTVKLW 652



 Score = 86.3 bits (212), Expect = 3e-17
 Identities = 50/182 (27%), Positives = 83/182 (45%), Gaps = 3/182 (1%)
 Frame = +2

Query: 278 GSALRVCADHRGGINWLSLSPDGQRLLTGSEDGTARLWSTADGQCCALLQGHESYVTFCQ 457
           G  L V   H   +  +    DG+R+++G+ D   ++W      C   LQGH + V   Q
Sbjct: 494 GQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQ 551

Query: 458 LEDEAAFTCSADCTIRKWDVLTGQCLQVFRGHTSIVNRILVTNNQLFSSSYDRTARAWSV 637
            +     + S D +IR WDV TG C+    GH S+ + + + +N L S + D T + W +
Sbjct: 552 FDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNILVSGNADSTVKIWDI 611

Query: 638 DKGQVSREFRG---HRNCVLTLAYSAPWDLPGAPCVEEAVAGGLLVTGSTDGTAKVWQVA 808
             GQ  +  +G   H++ V  L ++                   ++T S DGT K+W + 
Sbjct: 612 KTGQCLQTLQGPSKHQSAVTCLQFNK----------------NFVITSSDDGTVKLWDLK 655

Query: 809 SG 814
           +G
Sbjct: 656 TG 657



 Score = 66.2 bits (160), Expect = 3e-11
 Identities = 41/131 (31%), Positives = 59/131 (45%), Gaps = 1/131 (0%)
 Frame = +2

Query: 536 QVFRGHTS-IVNRILVTNNQLFSSSYDRTARAWSVDKGQVSREFRGHRNCVLTLAYSAPW 712
           +V +GH   ++  +    N++ S S D T + WS   G+  R   GH   V        W
Sbjct: 377 KVLKGHDDHVITCLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGV--------W 428

Query: 713 DLPGAPCVEEAVAGGLLVTGSTDGTAKVWQVASGCCHQTLRGHTGAVLCLVLDTPGHTAF 892
                      +   ++++GSTD T KVW   +G C  TL GHT  V C+ L        
Sbjct: 429 --------SSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHE--KRVV 478

Query: 893 TGSNDATIRAW 925
           +GS DAT+R W
Sbjct: 479 SGSRDATLRVW 489



 Score = 52.4 bits (124), Expect = 5e-07
 Identities = 30/89 (33%), Positives = 45/89 (50%), Gaps = 8/89 (8%)
 Frame = +2

Query: 353 LLTGSEDGTARLWSTADGQCCALLQG---HESYVTFCQLEDEAAFTCSADCTIRKWDVLT 523
           L++G+ D T ++W    GQC   LQG   H+S VT  Q       T S D T++ WD+ T
Sbjct: 597 LVSGNADSTVKIWDIKTGQCLQTLQGPSKHQSAVTCLQFNKNFVITSSDDGTVKLWDLKT 656

Query: 524 GQCLQVF-----RGHTSIVNRILVTNNQL 595
           G+ ++        G   +V RI  +N +L
Sbjct: 657 GEFIRNLVTLESGGSGGVVWRIRASNTKL 685


>ref|NP_796316.2| transcription initiation factor TFIID subunit 5 [Mus musculus].
          Length = 801

 Score =  108 bits (271), Expect = 4e-24
 Identities = 73/219 (33%), Positives = 95/219 (43%), Gaps = 4/219 (1%)
 Frame = +2

Query: 281  SALRVCADHRGGINWLSLSPDGQRLLTGSEDGTARLWSTADGQCCALLQGHESYVTFCQL 460
            S L++   H G +   S SPD   LL+ SEDGT RLWS     C    +GH   V   Q 
Sbjct: 535  SELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQF 594

Query: 461  EDEAAFTCSA--DCTIRKWDVLTGQCLQVFRGHTSIVN--RILVTNNQLFSSSYDRTARA 628
                 +  S   D   R W     Q L++F GH + VN  R    +N + + S DRT R 
Sbjct: 595  SPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRL 654

Query: 629  WSVDKGQVSREFRGHRNCVLTLAYSAPWDLPGAPCVEEAVAGGLLVTGSTDGTAKVWQVA 808
            W V  G   R F GH+  + +L +S                G  L TG+TDG   +W + 
Sbjct: 655  WDVLNGNCVRIFTGHKGPIHSLTFSPN--------------GRFLATGATDGRVLLWDIG 700

Query: 809  SGCCHQTLRGHTGAVLCLVLDTPGHTAFTGSNDATIRAW 925
             G     L+GHT  V  L     G    +GS D T+R W
Sbjct: 701  HGLMVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLW 739



 Score = 53.5 bits (127), Expect = 2e-07
 Identities = 30/85 (35%), Positives = 44/85 (51%), Gaps = 4/85 (4%)
 Frame = +2

Query: 278 GSALRVCADHRGGINWLSLSPDGQRLLTGSEDGTARLWSTADGQCCALLQGHESYVTFCQ 457
           G+ +R+   H+G I+ L+ SP+G+ L TG+ DG   LW    G     L+GH    T C 
Sbjct: 660 GNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTD--TVCS 717

Query: 458 L----EDEAAFTCSADCTIRKWDVL 520
           L    + E   + S D T+R WD +
Sbjct: 718 LRFSRDGEILASGSMDNTVRLWDAV 742


>ref|NP_083963.1| WD repeat-containing protein 38 [Mus musculus].
          Length = 303

 Score =  106 bits (264), Expect = 3e-23
 Identities = 69/220 (31%), Positives = 98/220 (44%), Gaps = 7/220 (3%)
 Frame = +2

Query: 287 LRVCADHRGGINWLSLSPDGQRLLTGSEDGTARLWSTADGQCCALLQGHESYVTFCQLED 466
           +R    H G +N  + SPDG+ LLT S+DG   +W T  G+    L GH   V  C    
Sbjct: 19  VRFYGQHHGEVNCSAFSPDGRTLLTASDDGCVYVWGTKSGRLLWRLAGHRGPVKSCCFSP 78

Query: 467 EAAF--TCSADCTIRKWDVLTGQCLQVFRGHTSIVNRILVT--NNQLFSSSYDRTARAWS 634
           +     + S+D +IR WDV   +CL V +GH   V  +  +  + QL S  +D+ A  W 
Sbjct: 79  DGRLIASSSSDHSIRLWDVARSKCLHVLKGHQRSVETVSFSPDSKQLASGGWDKRAIVWE 138

Query: 635 VDKGQVSREFRGHRNCVLTLAYSAPWDLPGAPCVEEAVAGGLLVTGSTDGTAKVWQVASG 814
           V  G+      GH + + +  +S   D               L TGS D T  +W + + 
Sbjct: 139 VQSGRRVHLLVGHCDSIQSSDFSPTSD--------------SLATGSWDSTVHIWDLRAS 184

Query: 815 ---CCHQTLRGHTGAVLCLVLDTPGHTAFTGSNDATIRAW 925
                +  L GHTG + CL     G  A +GS D TI  W
Sbjct: 185 TPVVSYHNLEGHTGNISCLCYSASGLLA-SGSWDKTICVW 223



 Score = 74.7 bits (182), Expect = 9e-14
 Identities = 59/223 (26%), Positives = 90/223 (40%), Gaps = 7/223 (3%)
 Frame = +2

Query: 278 GSALRVCADHRGGINWLSLSPDGQRLLTGSEDGTARLWSTADGQCCALLQGHESYVTFCQ 457
           G  L   A HRG +     SPDG+ + + S D + RLW  A  +C  +L+GH+  V    
Sbjct: 58  GRLLWRLAGHRGPVKSCCFSPDGRLIASSSSDHSIRLWDVARSKCLHVLKGHQRSVETVS 117

Query: 458 LEDEAAFTCSADCTIRK--WDVLTGQCLQVFRGHTSIV--NRILVTNNQLFSSSYDRTAR 625
              ++    S     R   W+V +G+ + +  GH   +  +    T++ L + S+D T  
Sbjct: 118 FSPDSKQLASGGWDKRAIVWEVQSGRRVHLLVGHCDSIQSSDFSPTSDSLATGSWDSTVH 177

Query: 626 AWSVDKGQ--VS-REFRGHRNCVLTLAYSAPWDLPGAPCVEEAVAGGLLVTGSTDGTAKV 796
            W +      VS     GH   +  L YS               A GLL +GS D T  V
Sbjct: 178 IWDLRASTPVVSYHNLEGHTGNISCLCYS---------------ASGLLASGSWDKTICV 222

Query: 797 WQVASGCCHQTLRGHTGAVLCLVLDTPGHTAFTGSNDATIRAW 925
           W+  +      L+GHT  V  L          +     T++ W
Sbjct: 223 WKPTTNNLPLQLKGHTIWVNSLAFSPDELKLASAGYSRTVKVW 265


>ref|NP_543124.1| WD repeat-containing protein 5 [Mus musculus].
          Length = 334

 Score =  101 bits (251), Expect = 9e-22
 Identities = 63/223 (28%), Positives = 102/223 (45%), Gaps = 7/223 (3%)
 Frame = +2

Query: 278 GSALRVCADHRGGINWLSLSPDGQRLLTGSEDGTARLWSTADGQCCALLQGHESYVTFCQ 457
           G   +  + H+ GI+ ++ S D   L++ S+D T ++W  + G+C   L+GH +YV  C 
Sbjct: 77  GKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCN 136

Query: 458 LEDEAAFTCSA--DCTIRKWDVLTGQCLQVFRGHTSIVNRILVT--NNQLFSSSYDRTAR 625
              ++    S   D ++R WDV TG+CL+    H+  V+ +      + + SSSYD   R
Sbjct: 137 FNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCR 196

Query: 626 AWSVDKGQVSREFRGHRNCVLTLAYSAPWDLPGAPCVEEAVAGGLLVTGSTDGTAKVWQV 805
            W    GQ          C+ TL      D P    V+ +  G  ++  + D T K+W  
Sbjct: 197 IWDTASGQ----------CLKTLIDD---DNPPVSFVKFSPNGKYILAATLDNTLKLWDY 243

Query: 806 ASGCCHQTLRGHTGAVLCLVLD---TPGHTAFTGSNDATIRAW 925
           + G C +T  GH     C+  +   T G    +GS D  +  W
Sbjct: 244 SKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIW 286



 Score = 88.6 bits (218), Expect = 6e-18
 Identities = 62/243 (25%), Positives = 107/243 (44%), Gaps = 6/243 (2%)
 Frame = +2

Query: 215 PLPSGAQPAPGPRPTSRMGGGGSALR-VCADHRGGINWLSLSPDGQRLLTGSEDGTARLW 391
           P PS +     P P         AL+   A H   ++ +  SP+G+ L + S D   ++W
Sbjct: 17  PTPSSSATQSKPTPVKP----NYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIW 72

Query: 392 STADGQCCALLQGHESYVTFCQLEDEAAFTCSA--DCTIRKWDVLTGQCLQVFRGHTSIV 565
              DG+    + GH+  ++      ++    SA  D T++ WDV +G+CL+  +GH++ V
Sbjct: 73  GAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYV 132

Query: 566 --NRILVTNNQLFSSSYDRTARAWSVDKGQVSREFRGHRNCVLTLAYSAPWDLPGAPCVE 739
                   +N + S S+D + R W V  G+  +    H + V  + ++            
Sbjct: 133 FCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRD---------- 182

Query: 740 EAVAGGLLVTGSTDGTAKVWQVASGCCHQTLRGHTGAVLCLVLDTP-GHTAFTGSNDATI 916
               G L+V+ S DG  ++W  ASG C +TL       +  V  +P G      + D T+
Sbjct: 183 ----GSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTL 238

Query: 917 RAW 925
           + W
Sbjct: 239 KLW 241



 Score = 68.9 bits (167), Expect = 5e-12
 Identities = 44/183 (24%), Positives = 79/183 (43%), Gaps = 8/183 (4%)
 Frame = +2

Query: 278 GSALRVCADHRGGINWLSLSPDGQRLLTGSEDGTARLWSTADGQCC-ALLQGHESYVTFC 454
           G  L+    H   ++ +  + DG  +++ S DG  R+W TA GQC   L+      V+F 
Sbjct: 161 GKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFV 220

Query: 455 QLEDEAAFTCSA--DCTIRKWDVLTGQCLQVFRGHTS-----IVNRILVTNNQLFSSSYD 613
           +      +  +A  D T++ WD   G+CL+ + GH +       N  +     + S S D
Sbjct: 221 KFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSED 280

Query: 614 RTARAWSVDKGQVSREFRGHRNCVLTLAYSAPWDLPGAPCVEEAVAGGLLVTGSTDGTAK 793
                W++   ++ ++ +GH + V++ A             E  +A   L     D T K
Sbjct: 281 NLVYIWNLQTKEIVQKLQGHTDVVISTACHP---------TENIIASAAL---ENDKTIK 328

Query: 794 VWQ 802
           +W+
Sbjct: 329 LWK 331



 Score = 49.7 bits (117), Expect = 3e-06
 Identities = 30/122 (24%), Positives = 58/122 (47%), Gaps = 9/122 (7%)
 Frame = +2

Query: 302 DHRGGINWLSLSPDGQRLLTGSEDGTARLWSTADGQCCALLQGHES-----YVTFCQLED 466
           D    ++++  SP+G+ +L  + D T +LW  + G+C     GH++     +  F     
Sbjct: 212 DDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGG 271

Query: 467 EAAFTCSADCTIRKWDVLTGQCLQVFRGHTSIV--NRILVTNNQLFSSSY--DRTARAWS 634
           +   + S D  +  W++ T + +Q  +GHT +V       T N + S++   D+T + W 
Sbjct: 272 KWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLWK 331

Query: 635 VD 640
            D
Sbjct: 332 SD 333


>ref|NP_038653.1| platelet-activating factor acetylhydrolase IB subunit alpha [Mus
           musculus].
          Length = 410

 Score =  101 bits (251), Expect = 9e-22
 Identities = 66/228 (28%), Positives = 105/228 (46%), Gaps = 12/228 (5%)
 Frame = +2

Query: 278 GSALRVCADHRGGINWLSLSPDGQRLLTGSEDGTARLWSTADGQCCALLQGHESYVTFCQ 457
           G   R    H   +  +S    G+ L + S D T +LW     +C   + GH+  V+   
Sbjct: 140 GDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVA 199

Query: 458 L--EDEAAFTCSADCTIRKWDVLTGQCLQVFRGHTSIVNRILVTNNQ----LFSSSYDRT 619
           +    +   + S D TI+ W+V TG C++ F GH   V   +V  NQ    + S S D+T
Sbjct: 200 IMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVR--MVRPNQDGTLIASCSNDQT 257

Query: 620 ARAWSVDKGQVSREFRGHRNCVLTLA------YSAPWDLPGAPCVEEAVAGGLLVTGSTD 781
            R W V   +   E R H + V  ++      YS+  +  G+   +    G  L++GS D
Sbjct: 258 VRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRD 317

Query: 782 GTAKVWQVASGCCHQTLRGHTGAVLCLVLDTPGHTAFTGSNDATIRAW 925
            T K+W V++G C  TL GH   V  ++  + G    + ++D T+R W
Sbjct: 318 KTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVW 365



 Score = 71.6 bits (174), Expect = 8e-13
 Identities = 53/201 (26%), Positives = 82/201 (40%), Gaps = 26/201 (12%)
 Frame = +2

Query: 278 GSALRVCADHRGGINWLSLSPDGQRLLTGSEDGTARLWSTADGQCCALLQGHESYVTFCQ 457
           G  ++    HR  +  +  + DG  + + S D T R+W  A  +C A L+ HE  V    
Sbjct: 224 GYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECIS 283

Query: 458 LEDEAAFTC----------------------SADCTIRKWDVLTGQCLQVFRGHTSIVNR 571
              E++++                       S D TI+ WDV TG CL    GH + V  
Sbjct: 284 WAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRG 343

Query: 572 ILVTNNQLF--SSSYDRTARAWSVDKGQVSREFRGHRNCVLTLAY--SAPWDLPGAPCVE 739
           +L  +   F  S + D+T R W     +  +    H + V +L +  +AP+         
Sbjct: 344 VLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPY--------- 394

Query: 740 EAVAGGLLVTGSTDGTAKVWQ 802
                  +VTGS D T KVW+
Sbjct: 395 -------VVTGSVDQTVKVWE 408



 Score = 68.2 bits (165), Expect = 9e-12
 Identities = 53/172 (30%), Positives = 74/172 (43%), Gaps = 4/172 (2%)
 Frame = +2

Query: 422 LQGHESYVTFCQLEDEAAFTCSA--DCTIRKWDVLTGQCLQVFRGHTSIVNRILV--TNN 589
           L GH S VT        +   SA  D TI+ WD  TG   +  +GHT  V  I    +  
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK 163

Query: 590 QLFSSSYDRTARAWSVDKGQVSREFRGHRNCVLTLAYSAPWDLPGAPCVEEAVAGGLLVT 769
            L S S D T + W     +  R   GH + V ++A      +P          G  +V+
Sbjct: 164 LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAI-----MPN---------GDHIVS 209

Query: 770 GSTDGTAKVWQVASGCCHQTLRGHTGAVLCLVLDTPGHTAFTGSNDATIRAW 925
            S D T K+W+V +G C +T  GH   V  +  +  G    + SND T+R W
Sbjct: 210 ASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVW 261


>ref|NP_598776.1| F-box/WD repeat-containing protein 11 [Mus musculus].
          Length = 563

 Score = 97.1 bits (240), Expect = 2e-20
 Identities = 61/216 (28%), Positives = 95/216 (43%), Gaps = 3/216 (1%)
 Frame = +2

Query: 287 LRVCADHRGGINWLSLSPDGQRLLTGSEDGTARLWSTADGQCCALLQGHESYVTFCQLED 466
           L+V   H G +  L L  D + ++TGS D T R+W    G+    L  H   V   +  +
Sbjct: 294 LKVLTGHTGSV--LCLQYDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSN 351

Query: 467 EAAFTCSADCTIRKWDVLTGQCL---QVFRGHTSIVNRILVTNNQLFSSSYDRTARAWSV 637
               TCS D +I  WD+ +   +   +V  GH + VN +   +  + S+S DRT + WS 
Sbjct: 352 GLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWST 411

Query: 638 DKGQVSREFRGHRNCVLTLAYSAPWDLPGAPCVEEAVAGGLLVTGSTDGTAKVWQVASGC 817
              +  R   GH+  +  L Y                   L+V+GS+D T ++W +  G 
Sbjct: 412 STCEFVRTLNGHKRGIACLQY----------------RDRLVVSGSSDNTIRLWDIECGA 455

Query: 818 CHQTLRGHTGAVLCLVLDTPGHTAFTGSNDATIRAW 925
           C + L GH   V C+  D       +G+ D  I+ W
Sbjct: 456 CLRVLEGHEELVRCIRFD--NKRIVSGAYDGKIKVW 489



 Score = 74.3 bits (181), Expect = 1e-13
 Identities = 37/116 (31%), Positives = 59/116 (50%)
 Frame = +2

Query: 290 RVCADHRGGINWLSLSPDGQRLLTGSEDGTARLWSTADGQCCALLQGHESYVTFCQLEDE 469
           RV   HR  +N +    D + +++ S D T ++WST+  +    L GH+  +   Q  D 
Sbjct: 378 RVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDR 435

Query: 470 AAFTCSADCTIRKWDVLTGQCLQVFRGHTSIVNRILVTNNQLFSSSYDRTARAWSV 637
              + S+D TIR WD+  G CL+V  GH  +V  I   N ++ S +YD   + W +
Sbjct: 436 LVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDL 491



 Score = 68.6 bits (166), Expect = 7e-12
 Identities = 57/228 (25%), Positives = 87/228 (38%), Gaps = 12/228 (5%)
 Frame = +2

Query: 278 GSALRVCADHRGGINWLSLSPDGQRLLTGSEDGTARLWSTADGQCCAL---LQGHESYVT 448
           G  L     H   +  L  S     ++T S+D +  +W  A      L   L GH + V 
Sbjct: 331 GEVLNTLIHHNEAVLHLRFS--NGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVN 388

Query: 449 FCQLEDEAAFTCSADCTIRKWDVLTGQCLQVFRGHTSIVNRILVTNNQLFSSSYDRTARA 628
               +D+   + S D TI+ W   T + ++   GH   +  +   +  + S S D T R 
Sbjct: 389 VVDFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRL 448

Query: 629 WSVDKGQVSREFRGHRNCVLTLAYSAPWDLPGAPCVEEAVAGGLLVTGSTDGTAKVWQV- 805
           W ++ G   R   GH   V  + +                    +V+G+ DG  KVW + 
Sbjct: 449 WDIECGACLRVLEGHEELVRCIRFD----------------NKRIVSGAYDGKIKVWDLQ 492

Query: 806 --------ASGCCHQTLRGHTGAVLCLVLDTPGHTAFTGSNDATIRAW 925
                   AS  C +TL  H+G V  L  D       + S+D TI  W
Sbjct: 493 AALDPRAPASTLCLRTLVEHSGRVFRLQFDE--FQIISSSHDDTILIW 538


>ref|NP_081389.1| WD repeat-containing protein 5B [Mus musculus].
          Length = 328

 Score = 94.0 bits (232), Expect = 1e-19
 Identities = 65/221 (29%), Positives = 104/221 (47%), Gaps = 7/221 (3%)
 Frame = +2

Query: 284 ALRVC-ADHRGGINWLSLSPDGQRLLTGSEDGTARLWSTADGQCCALLQGHESYVTFCQL 460
           ALR+  A H   I+ +  SP+G+ L + + D    +W   DG C   L GH   ++    
Sbjct: 30  ALRLTLAGHSAAISSVKFSPNGEWLASSAADALIIIWGAYDGNCKKTLYGHSLEISDVAW 89

Query: 461 EDEAAFTCSA--DCTIRKWDVLTGQCLQVFRGHTSIV--NRILVTNNQLFSSSYDRTARA 628
             +++   SA  D T++ WD+ +G+CL+  +GH+  V        +N + S S+D + + 
Sbjct: 90  SSDSSRLVSASDDKTLKVWDMRSGKCLKTLKGHSDFVFCCDFNPPSNLIVSGSFDESVKI 149

Query: 629 WSVDKGQVSREFRGHRNCVLTL-AYSAPWDLPGAPCVEEAVAGGLLVTGSTDGTAKVWQV 805
           W V  G+          C+ TL A+S P       C      G L+V+GS DG  ++W  
Sbjct: 150 WEVKTGK----------CLKTLSAHSDPISAVNFNC-----NGSLIVSGSYDGLCRIWDA 194

Query: 806 ASGCCHQTLRGHTGAVLCLVLDTP-GHTAFTGSNDATIRAW 925
           ASG C +TL       +  V  +P G    T + D T++ W
Sbjct: 195 ASGQCLRTLADEGNPPVSFVKFSPNGKYILTATLDNTLKLW 235



 Score = 91.3 bits (225), Expect = 1e-18
 Identities = 60/223 (26%), Positives = 96/223 (43%), Gaps = 7/223 (3%)
 Frame = +2

Query: 278 GSALRVCADHRGGINWLSLSPDGQRLLTGSEDGTARLWSTADGQCCALLQGHESYVTFCQ 457
           G+  +    H   I+ ++ S D  RL++ S+D T ++W    G+C   L+GH  +V  C 
Sbjct: 71  GNCKKTLYGHSLEISDVAWSSDSSRLVSASDDKTLKVWDMRSGKCLKTLKGHSDFVFCCD 130

Query: 458 LEDEAAFTCSA--DCTIRKWDVLTGQCLQVFRGHTSIVNRILVTNN--QLFSSSYDRTAR 625
               +    S   D +++ W+V TG+CL+    H+  ++ +    N   + S SYD   R
Sbjct: 131 FNPPSNLIVSGSFDESVKIWEVKTGKCLKTLSAHSDPISAVNFNCNGSLIVSGSYDGLCR 190

Query: 626 AWSVDKGQVSREFRGHRNCVLTLAYSAPWDLPGAPCVEEAVAGGLLVTGSTDGTAKVWQV 805
            W    GQ          C+ TLA       P    V+ +  G  ++T + D T K+W  
Sbjct: 191 IWDAASGQ----------CLRTLADEGN---PPVSFVKFSPNGKYILTATLDNTLKLWDY 237

Query: 806 ASGCCHQTLRGHTGAVLCLVLD---TPGHTAFTGSNDATIRAW 925
           + G C +T  GH     CL      T      +GS D  +  W
Sbjct: 238 SRGRCLKTYTGHKNEKYCLFASFSVTGRKWVVSGSEDNMVYIW 280



 Score = 66.6 bits (161), Expect = 3e-11
 Identities = 44/182 (24%), Positives = 82/182 (45%), Gaps = 8/182 (4%)
 Frame = +2

Query: 278 GSALRVCADHRGGINWLSLSPDGQRLLTGSEDGTARLWSTADGQCCALLQGHESY-VTFC 454
           G  L+  + H   I+ ++ + +G  +++GS DG  R+W  A GQC   L    +  V+F 
Sbjct: 155 GKCLKTLSAHSDPISAVNFNCNGSLIVSGSYDGLCRIWDAASGQCLRTLADEGNPPVSFV 214

Query: 455 QLEDEAAF--TCSADCTIRKWDVLTGQCLQVFRGHTS----IVNRILVTNNQ-LFSSSYD 613
           +      +  T + D T++ WD   G+CL+ + GH +    +     VT  + + S S D
Sbjct: 215 KFSPNGKYILTATLDNTLKLWDYSRGRCLKTYTGHKNEKYCLFASFSVTGRKWVVSGSED 274

Query: 614 RTARAWSVDKGQVSREFRGHRNCVLTLAYSAPWDLPGAPCVEEAVAGGLLVTGSTDGTAK 793
                W++   ++ +  +GH + V++ A     ++  +  +E             D T K
Sbjct: 275 NMVYIWNLQTKEIVQRLQGHTDVVISAACHPTKNIIASAALE------------NDKTIK 322

Query: 794 VW 799
           VW
Sbjct: 323 VW 324



 Score = 55.8 bits (133), Expect = 4e-08
 Identities = 36/131 (27%), Positives = 65/131 (49%), Gaps = 10/131 (7%)
 Frame = +2

Query: 278 GSALRVCADHRGG-INWLSLSPDGQRLLTGSEDGTARLWSTADGQCCALLQGHES----- 439
           G  LR  AD     ++++  SP+G+ +LT + D T +LW  + G+C     GH++     
Sbjct: 197 GQCLRTLADEGNPPVSFVKFSPNGKYILTATLDNTLKLWDYSRGRCLKTYTGHKNEKYCL 256

Query: 440 YVTFCQLEDEAAFTCSADCTIRKWDVLTGQCLQVFRGHTSIVNRILV--TNNQLFSSSY- 610
           + +F     +   + S D  +  W++ T + +Q  +GHT +V       T N + S++  
Sbjct: 257 FASFSVTGRKWVVSGSEDNMVYIWNLQTKEIVQRLQGHTDVVISAACHPTKNIIASAALE 316

Query: 611 -DRTARAWSVD 640
            D+T + WS D
Sbjct: 317 NDKTIKVWSSD 327


  Database: RefSeq49_MP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 15,617,559
  Number of sequences in database:  30,036
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 30036
Number of Hits to DB: 32,082,327
Number of extensions: 995813
Number of successful extensions: 8083
Number of sequences better than 1.0e-05: 105
Number of HSP's gapped: 7071
Number of HSP's successfully gapped: 245
Length of query: 308
Length of database: 15,617,559
Length adjustment: 101
Effective length of query: 207
Effective length of database: 12,583,923
Effective search space: 2604872061
Effective search space used: 2604872061
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-013843
         (926 letters)

Database: RefSeq49_HP.fasta 
           32,964 sequences; 18,297,164 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_938026.2| WD repeat-containing protein 86 [Homo sapiens].      449   e-126
Alignment   gi|NP_001038941.1| WD repeat-containing protein 38 [Homo sapien...   128   8e-30
Alignment   gi|NP_001013433.1| F-box/WD repeat-containing protein 7 isoform...   112   6e-25
Alignment   gi|NP_361014.1| F-box/WD repeat-containing protein 7 isoform 1 ...   112   6e-25
Alignment   gi|NP_060785.2| F-box/WD repeat-containing protein 7 isoform 2 ...   112   6e-25
Alignment   gi|NP_008882.2| transcription initiation factor TFIID subunit 5...   108   5e-24
Alignment   gi|NP_000421.1| platelet-activating factor acetylhydrolase IB s...   101   1e-21
Alignment   gi|NP_438172.1| WD repeat-containing protein 5 [Homo sapiens].       101   1e-21
Alignment   gi|NP_060058.1| WD repeat-containing protein 5 [Homo sapiens].       101   1e-21
Alignment   gi|NP_061942.2| WD repeat-containing protein 5B [Homo sapiens].       98   9e-21

>ref|NP_938026.2| WD repeat-containing protein 86 [Homo sapiens].
          Length = 376

 Score =  449 bits (1154), Expect = e-126
 Identities = 210/220 (95%), Positives = 213/220 (96%)
 Frame = +2

Query: 266 MGGGGSALRVCADHRGGINWLSLSPDGQRLLTGSEDGTARLWSTADGQCCALLQGHESYV 445
           MGGGGSALRVCADHRGGINWLSLSPDGQRLLTGSEDGTARLWSTADGQCCALLQGHESYV
Sbjct: 1   MGGGGSALRVCADHRGGINWLSLSPDGQRLLTGSEDGTARLWSTADGQCCALLQGHESYV 60

Query: 446 TFCQLEDEAAFTCSADCTIRKWDVLTGQCLQVFRGHTSIVNRILVTNNQLFSSSYDRTAR 625
           TFCQLEDEAAFTCSADCTIR+WDVLTGQCLQV+RGHTSIVNRILV NNQLFSSSYDRTAR
Sbjct: 61  TFCQLEDEAAFTCSADCTIRRWDVLTGQCLQVYRGHTSIVNRILVANNQLFSSSYDRTAR 120

Query: 626 AWSVDKGQVSREFRGHRNCVLTLAYSAPWDLPGAPCVEEAVAGGLLVTGSTDGTAKVWQV 805
            WSVDKGQ+SREFRGHRNCVLTLAYSAPWDLP  PC EEA AGGLLVTGSTDGTAKVWQV
Sbjct: 121 VWSVDKGQMSREFRGHRNCVLTLAYSAPWDLPSTPCAEEAAAGGLLVTGSTDGTAKVWQV 180

Query: 806 ASGCCHQTLRGHTGAVLCLVLDTPGHTAFTGSNDATIRAW 925
           ASGCCHQTLRGHTGAVLCLVLDTPGHTAFTGS DATIRAW
Sbjct: 181 ASGCCHQTLRGHTGAVLCLVLDTPGHTAFTGSTDATIRAW 220



 Score =  124 bits (312), Expect = 9e-29
 Identities = 73/196 (37%), Positives = 96/196 (48%), Gaps = 2/196 (1%)
 Frame = +2

Query: 344 GQRLLTGSEDGTARLWSTADGQCCALLQGHESYVTFCQLED--EAAFTCSADCTIRKWDV 517
           G  L+TGS DGTA++W  A G C   L+GH   V    L+     AFT S D TIR WD+
Sbjct: 163 GGLLVTGSTDGTAKVWQVASGCCHQTLRGHTGAVLCLVLDTPGHTAFTGSTDATIRAWDI 222

Query: 518 LTGQCLQVFRGHTSIVNRILVTNNQLFSSSYDRTARAWSVDKGQVSREFRGHRNCVLTLA 697
           L+G+ L+VFR H   V  + + N  ++S S DRT + W  D G+  R F  HR  V  L 
Sbjct: 223 LSGEQLRVFREHRGSVICLELVNRLVYSGSADRTVKCWLADTGECVRTFTAHRRNVSALK 282

Query: 698 YSAPWDLPGAPCVEEAVAGGLLVTGSTDGTAKVWQVASGCCHQTLRGHTGAVLCLVLDTP 877
           Y A                G L TGS D  A+ +   SG   +  RGHT  + C  +   
Sbjct: 283 YHA----------------GTLFTGSGDACARAFDAQSGELRRVFRGHTFIINC--IQVH 324

Query: 878 GHTAFTGSNDATIRAW 925
           G   +T S+D  +R W
Sbjct: 325 GQVLYTASHDGALRLW 340



 Score = 83.6 bits (205), Expect = 2e-16
 Identities = 51/170 (30%), Positives = 74/170 (43%), Gaps = 3/170 (1%)
 Frame = +2

Query: 305 HRGGINWLSLSPDGQRLLTGSEDGTARLWSTADGQCCALLQGHESYVTFCQLEDEAAFTC 484
           H G +  L L   G    TGS D T R W    G+   + + H   V   +L +   ++ 
Sbjct: 192 HTGAVLCLVLDTPGHTAFTGSTDATIRAWDILSGEQLRVFREHRGSVICLELVNRLVYSG 251

Query: 485 SADCTIRKWDVLTGQCLQVFRGHTSIVNRILVTNNQLFSSSYDRTARAWSVDKGQVSREF 664
           SAD T++ W   TG+C++ F  H   V+ +      LF+ S D  ARA+    G++ R F
Sbjct: 252 SADRTVKCWLADTGECVRTFTAHRRNVSALKYHAGTLFTGSGDACARAFDAQSGELRRVF 311

Query: 665 RGHR---NCVLTLAYSAPWDLPGAPCVEEAVAGGLLVTGSTDGTAKVWQV 805
           RGH    NC+                    V G +L T S DG  ++W V
Sbjct: 312 RGHTFIINCI-------------------QVHGQVLYTASHDGALRLWDV 342


>ref|NP_001038941.1| WD repeat-containing protein 38 [Homo sapiens].
          Length = 314

 Score =  128 bits (321), Expect = 8e-30
 Identities = 79/214 (36%), Positives = 101/214 (47%), Gaps = 7/214 (3%)
 Frame = +2

Query: 305 HRGGINWLSLSPDGQRLLTGSEDGTARLWSTADGQCCALLQGHESYVTFCQLEDEAAFTC 484
           H G +N  + SPDGQ LLTGSEDG    W T  GQ    L GH   V FC+   +     
Sbjct: 20  HGGEVNSSAFSPDGQMLLTGSEDGCVYGWETRSGQLLWRLGGHTGPVKFCRFSPDGHLFA 79

Query: 485 SA--DCTIRKWDVLTGQCLQVFRGHTSIVNRILVT--NNQLFSSSYDRTARAWSVDKGQV 652
           SA  DCT+R WDV   +CL+V +GH   V  +  +  + QL S  +D+    W V  GQ+
Sbjct: 80  SASCDCTVRLWDVARAKCLRVLKGHQRSVETVSFSPDSRQLASGGWDKRVMLWDVQSGQM 139

Query: 653 SREFRGHRNCVLTLAYSAPWDLPGAPCVEEAVAGGLLVTGSTDGTAKVW---QVASGCCH 823
            R   GHR+ + +  +S     P   C         L TGS D T  +W    V     H
Sbjct: 140 LRLLVGHRDSIQSSDFS-----PTVNC---------LATGSWDSTVHIWDLRMVTPAVSH 185

Query: 824 QTLRGHTGAVLCLVLDTPGHTAFTGSNDATIRAW 925
           Q L GH+  + CL     G  A +GS D TI  W
Sbjct: 186 QALEGHSANISCLCYSASGLLA-SGSWDKTIHIW 218



 Score = 75.5 bits (184), Expect = 6e-14
 Identities = 55/195 (28%), Positives = 79/195 (40%), Gaps = 7/195 (3%)
 Frame = +2

Query: 278 GSALRVCADHRGGINWLSLSPDGQRLLTGSEDGTARLWSTADGQCCALLQGHESYVTFCQ 457
           G  L     H G + +   SPDG    + S D T RLW  A  +C  +L+GH+  V    
Sbjct: 53  GQLLWRLGGHTGPVKFCRFSPDGHLFASASCDCTVRLWDVARAKCLRVLKGHQRSVETVS 112

Query: 458 LEDEAAFTCSA--DCTIRKWDVLTGQCLQVFRGHTSIV--NRILVTNNQLFSSSYDRTAR 625
              ++    S   D  +  WDV +GQ L++  GH   +  +    T N L + S+D T  
Sbjct: 113 FSPDSRQLASGGWDKRVMLWDVQSGQMLRLLVGHRDSIQSSDFSPTVNCLATGSWDSTVH 172

Query: 626 AWS---VDKGQVSREFRGHRNCVLTLAYSAPWDLPGAPCVEEAVAGGLLVTGSTDGTAKV 796
            W    V      +   GH   +  L YS               A GLL +GS D T  +
Sbjct: 173 IWDLRMVTPAVSHQALEGHSANISCLCYS---------------ASGLLASGSWDKTIHI 217

Query: 797 WQVASGCCHQTLRGH 841
           W+  +      L+GH
Sbjct: 218 WKPTTSSLLIQLKGH 232



 Score = 70.9 bits (172), Expect = 2e-12
 Identities = 56/217 (25%), Positives = 87/217 (40%), Gaps = 6/217 (2%)
 Frame = +2

Query: 287 LRVCADHRGGINWLSLSPDGQRLLTGSEDGTARLWSTADGQCCALLQGHESYVTFCQLED 466
           LRV   H+  +  +S SPD ++L +G  D    LW    GQ   LL GH   +       
Sbjct: 98  LRVLKGHQRSVETVSFSPDSRQLASGGWDKRVMLWDVQSGQMLRLLVGHRDSIQSSDFSP 157

Query: 467 --EAAFTCSADCTIRKWD---VLTGQCLQVFRGHTSIVNRILVTNNQLFSS-SYDRTARA 628
                 T S D T+  WD   V      Q   GH++ ++ +  + + L +S S+D+T   
Sbjct: 158 TVNCLATGSWDSTVHIWDLRMVTPAVSHQALEGHSANISCLCYSASGLLASGSWDKTIHI 217

Query: 629 WSVDKGQVSREFRGHRNCVLTLAYSAPWDLPGAPCVEEAVAGGLLVTGSTDGTAKVWQVA 808
           W      +  + +GH   V ++A+S P +L              L +       KVW   
Sbjct: 218 WKPTTSSLLIQLKGHVTWVKSIAFS-PDEL-------------WLASAGYSRMVKVWDCN 263

Query: 809 SGCCHQTLRGHTGAVLCLVLDTPGHTAFTGSNDATIR 919
           +G C +TL+G             G    +G+ D T R
Sbjct: 264 TGKCLETLKGVLDVAHTCAFTPDGKILVSGAADQTRR 300


>ref|NP_001013433.1| F-box/WD repeat-containing protein 7 isoform 3 [Homo sapiens].
          Length = 589

 Score =  112 bits (279), Expect = 6e-25
 Identities = 63/194 (32%), Positives = 91/194 (46%)
 Frame = +2

Query: 344 GQRLLTGSEDGTARLWSTADGQCCALLQGHESYVTFCQLEDEAAFTCSADCTIRKWDVLT 523
           G R+++GS+D T ++WS   G+C   L GH   V   Q+ D    + S D T++ W+  T
Sbjct: 273 GNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDNIIISGSTDRTLKVWNAET 332

Query: 524 GQCLQVFRGHTSIVNRILVTNNQLFSSSYDRTARAWSVDKGQVSREFRGHRNCVLTLAYS 703
           G+C+    GHTS V  + +   ++ S S D T R W ++ GQ      GH   V  + Y 
Sbjct: 333 GECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYD 392

Query: 704 APWDLPGAPCVEEAVAGGLLVTGSTDGTAKVWQVASGCCHQTLRGHTGAVLCLVLDTPGH 883
                           G  +V+G+ D   KVW   +  C  TL+GHT  V  L  D  G 
Sbjct: 393 ----------------GRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFD--GI 434

Query: 884 TAFTGSNDATIRAW 925
              +GS D +IR W
Sbjct: 435 HVVSGSLDTSIRVW 448



 Score =  102 bits (255), Expect = 4e-22
 Identities = 57/196 (29%), Positives = 91/196 (46%), Gaps = 3/196 (1%)
 Frame = +2

Query: 347 QRLLTGSEDGTARLWSTADGQCCALLQGHESYVTFCQLEDEAAFTCSADCTIRKWDVLTG 526
           +R+++GS D T R+W    GQC  +L GH + V   Q +     + + D  ++ WD  T 
Sbjct: 354 KRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETE 413

Query: 527 QCLQVFRGHTSIVNRILVTNNQLFSSSYDRTARAWSVDKGQVSREFRGHRNCVLTLAYSA 706
            CL   +GHT+ V  +      + S S D + R W V+ G       GH++    +    
Sbjct: 414 TCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGM---- 469

Query: 707 PWDLPGAPCVEEAVAGGLLVTGSTDGTAKVWQVASGCCHQTLRG---HTGAVLCLVLDTP 877
                        +   +LV+G+ D T K+W + +G C QTL+G   H  AV CL  +  
Sbjct: 470 ------------ELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNK- 516

Query: 878 GHTAFTGSNDATIRAW 925
            +   T S+D T++ W
Sbjct: 517 -NFVITSSDDGTVKLW 531



 Score = 86.3 bits (212), Expect = 4e-17
 Identities = 50/182 (27%), Positives = 83/182 (45%), Gaps = 3/182 (1%)
 Frame = +2

Query: 278 GSALRVCADHRGGINWLSLSPDGQRLLTGSEDGTARLWSTADGQCCALLQGHESYVTFCQ 457
           G  L V   H   +  +    DG+R+++G+ D   ++W      C   LQGH + V   Q
Sbjct: 373 GQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQ 430

Query: 458 LEDEAAFTCSADCTIRKWDVLTGQCLQVFRGHTSIVNRILVTNNQLFSSSYDRTARAWSV 637
            +     + S D +IR WDV TG C+    GH S+ + + + +N L S + D T + W +
Sbjct: 431 FDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNILVSGNADSTVKIWDI 490

Query: 638 DKGQVSREFRG---HRNCVLTLAYSAPWDLPGAPCVEEAVAGGLLVTGSTDGTAKVWQVA 808
             GQ  +  +G   H++ V  L ++                   ++T S DGT K+W + 
Sbjct: 491 KTGQCLQTLQGPNKHQSAVTCLQFNK----------------NFVITSSDDGTVKLWDLK 534

Query: 809 SG 814
           +G
Sbjct: 535 TG 536



 Score = 66.2 bits (160), Expect = 4e-11
 Identities = 41/131 (31%), Positives = 59/131 (45%), Gaps = 1/131 (0%)
 Frame = +2

Query: 536 QVFRGHTS-IVNRILVTNNQLFSSSYDRTARAWSVDKGQVSREFRGHRNCVLTLAYSAPW 712
           +V +GH   ++  +    N++ S S D T + WS   G+  R   GH   V        W
Sbjct: 256 KVLKGHDDHVITCLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGV--------W 307

Query: 713 DLPGAPCVEEAVAGGLLVTGSTDGTAKVWQVASGCCHQTLRGHTGAVLCLVLDTPGHTAF 892
                      +   ++++GSTD T KVW   +G C  TL GHT  V C+ L        
Sbjct: 308 --------SSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHE--KRVV 357

Query: 893 TGSNDATIRAW 925
           +GS DAT+R W
Sbjct: 358 SGSRDATLRVW 368



 Score = 52.4 bits (124), Expect = 6e-07
 Identities = 30/89 (33%), Positives = 45/89 (50%), Gaps = 8/89 (8%)
 Frame = +2

Query: 353 LLTGSEDGTARLWSTADGQCCALLQG---HESYVTFCQLEDEAAFTCSADCTIRKWDVLT 523
           L++G+ D T ++W    GQC   LQG   H+S VT  Q       T S D T++ WD+ T
Sbjct: 476 LVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLWDLKT 535

Query: 524 GQCLQVF-----RGHTSIVNRILVTNNQL 595
           G+ ++        G   +V RI  +N +L
Sbjct: 536 GEFIRNLVTLESGGSGGVVWRIRASNTKL 564


>ref|NP_361014.1| F-box/WD repeat-containing protein 7 isoform 1 [Homo sapiens].
          Length = 707

 Score =  112 bits (279), Expect = 6e-25
 Identities = 63/194 (32%), Positives = 91/194 (46%)
 Frame = +2

Query: 344 GQRLLTGSEDGTARLWSTADGQCCALLQGHESYVTFCQLEDEAAFTCSADCTIRKWDVLT 523
           G R+++GS+D T ++WS   G+C   L GH   V   Q+ D    + S D T++ W+  T
Sbjct: 391 GNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDNIIISGSTDRTLKVWNAET 450

Query: 524 GQCLQVFRGHTSIVNRILVTNNQLFSSSYDRTARAWSVDKGQVSREFRGHRNCVLTLAYS 703
           G+C+    GHTS V  + +   ++ S S D T R W ++ GQ      GH   V  + Y 
Sbjct: 451 GECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYD 510

Query: 704 APWDLPGAPCVEEAVAGGLLVTGSTDGTAKVWQVASGCCHQTLRGHTGAVLCLVLDTPGH 883
                           G  +V+G+ D   KVW   +  C  TL+GHT  V  L  D  G 
Sbjct: 511 ----------------GRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFD--GI 552

Query: 884 TAFTGSNDATIRAW 925
              +GS D +IR W
Sbjct: 553 HVVSGSLDTSIRVW 566



 Score =  102 bits (255), Expect = 4e-22
 Identities = 57/196 (29%), Positives = 91/196 (46%), Gaps = 3/196 (1%)
 Frame = +2

Query: 347  QRLLTGSEDGTARLWSTADGQCCALLQGHESYVTFCQLEDEAAFTCSADCTIRKWDVLTG 526
            +R+++GS D T R+W    GQC  +L GH + V   Q +     + + D  ++ WD  T 
Sbjct: 472  KRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETE 531

Query: 527  QCLQVFRGHTSIVNRILVTNNQLFSSSYDRTARAWSVDKGQVSREFRGHRNCVLTLAYSA 706
             CL   +GHT+ V  +      + S S D + R W V+ G       GH++    +    
Sbjct: 532  TCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGM---- 587

Query: 707  PWDLPGAPCVEEAVAGGLLVTGSTDGTAKVWQVASGCCHQTLRG---HTGAVLCLVLDTP 877
                         +   +LV+G+ D T K+W + +G C QTL+G   H  AV CL  +  
Sbjct: 588  ------------ELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNK- 634

Query: 878  GHTAFTGSNDATIRAW 925
             +   T S+D T++ W
Sbjct: 635  -NFVITSSDDGTVKLW 649



 Score = 86.3 bits (212), Expect = 4e-17
 Identities = 50/182 (27%), Positives = 83/182 (45%), Gaps = 3/182 (1%)
 Frame = +2

Query: 278 GSALRVCADHRGGINWLSLSPDGQRLLTGSEDGTARLWSTADGQCCALLQGHESYVTFCQ 457
           G  L V   H   +  +    DG+R+++G+ D   ++W      C   LQGH + V   Q
Sbjct: 491 GQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQ 548

Query: 458 LEDEAAFTCSADCTIRKWDVLTGQCLQVFRGHTSIVNRILVTNNQLFSSSYDRTARAWSV 637
            +     + S D +IR WDV TG C+    GH S+ + + + +N L S + D T + W +
Sbjct: 549 FDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNILVSGNADSTVKIWDI 608

Query: 638 DKGQVSREFRG---HRNCVLTLAYSAPWDLPGAPCVEEAVAGGLLVTGSTDGTAKVWQVA 808
             GQ  +  +G   H++ V  L ++                   ++T S DGT K+W + 
Sbjct: 609 KTGQCLQTLQGPNKHQSAVTCLQFNK----------------NFVITSSDDGTVKLWDLK 652

Query: 809 SG 814
           +G
Sbjct: 653 TG 654



 Score = 66.2 bits (160), Expect = 4e-11
 Identities = 41/131 (31%), Positives = 59/131 (45%), Gaps = 1/131 (0%)
 Frame = +2

Query: 536 QVFRGHTS-IVNRILVTNNQLFSSSYDRTARAWSVDKGQVSREFRGHRNCVLTLAYSAPW 712
           +V +GH   ++  +    N++ S S D T + WS   G+  R   GH   V        W
Sbjct: 374 KVLKGHDDHVITCLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGV--------W 425

Query: 713 DLPGAPCVEEAVAGGLLVTGSTDGTAKVWQVASGCCHQTLRGHTGAVLCLVLDTPGHTAF 892
                      +   ++++GSTD T KVW   +G C  TL GHT  V C+ L        
Sbjct: 426 --------SSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHE--KRVV 475

Query: 893 TGSNDATIRAW 925
           +GS DAT+R W
Sbjct: 476 SGSRDATLRVW 486



 Score = 52.4 bits (124), Expect = 6e-07
 Identities = 30/89 (33%), Positives = 45/89 (50%), Gaps = 8/89 (8%)
 Frame = +2

Query: 353 LLTGSEDGTARLWSTADGQCCALLQG---HESYVTFCQLEDEAAFTCSADCTIRKWDVLT 523
           L++G+ D T ++W    GQC   LQG   H+S VT  Q       T S D T++ WD+ T
Sbjct: 594 LVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLWDLKT 653

Query: 524 GQCLQVF-----RGHTSIVNRILVTNNQL 595
           G+ ++        G   +V RI  +N +L
Sbjct: 654 GEFIRNLVTLESGGSGGVVWRIRASNTKL 682


>ref|NP_060785.2| F-box/WD repeat-containing protein 7 isoform 2 [Homo sapiens].
          Length = 627

 Score =  112 bits (279), Expect = 6e-25
 Identities = 63/194 (32%), Positives = 91/194 (46%)
 Frame = +2

Query: 344 GQRLLTGSEDGTARLWSTADGQCCALLQGHESYVTFCQLEDEAAFTCSADCTIRKWDVLT 523
           G R+++GS+D T ++WS   G+C   L GH   V   Q+ D    + S D T++ W+  T
Sbjct: 311 GNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDNIIISGSTDRTLKVWNAET 370

Query: 524 GQCLQVFRGHTSIVNRILVTNNQLFSSSYDRTARAWSVDKGQVSREFRGHRNCVLTLAYS 703
           G+C+    GHTS V  + +   ++ S S D T R W ++ GQ      GH   V  + Y 
Sbjct: 371 GECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYD 430

Query: 704 APWDLPGAPCVEEAVAGGLLVTGSTDGTAKVWQVASGCCHQTLRGHTGAVLCLVLDTPGH 883
                           G  +V+G+ D   KVW   +  C  TL+GHT  V  L  D  G 
Sbjct: 431 ----------------GRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFD--GI 472

Query: 884 TAFTGSNDATIRAW 925
              +GS D +IR W
Sbjct: 473 HVVSGSLDTSIRVW 486



 Score =  102 bits (255), Expect = 4e-22
 Identities = 57/196 (29%), Positives = 91/196 (46%), Gaps = 3/196 (1%)
 Frame = +2

Query: 347 QRLLTGSEDGTARLWSTADGQCCALLQGHESYVTFCQLEDEAAFTCSADCTIRKWDVLTG 526
           +R+++GS D T R+W    GQC  +L GH + V   Q +     + + D  ++ WD  T 
Sbjct: 392 KRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETE 451

Query: 527 QCLQVFRGHTSIVNRILVTNNQLFSSSYDRTARAWSVDKGQVSREFRGHRNCVLTLAYSA 706
            CL   +GHT+ V  +      + S S D + R W V+ G       GH++    +    
Sbjct: 452 TCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGM---- 507

Query: 707 PWDLPGAPCVEEAVAGGLLVTGSTDGTAKVWQVASGCCHQTLRG---HTGAVLCLVLDTP 877
                        +   +LV+G+ D T K+W + +G C QTL+G   H  AV CL  +  
Sbjct: 508 ------------ELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNK- 554

Query: 878 GHTAFTGSNDATIRAW 925
            +   T S+D T++ W
Sbjct: 555 -NFVITSSDDGTVKLW 569



 Score = 86.3 bits (212), Expect = 4e-17
 Identities = 50/182 (27%), Positives = 83/182 (45%), Gaps = 3/182 (1%)
 Frame = +2

Query: 278 GSALRVCADHRGGINWLSLSPDGQRLLTGSEDGTARLWSTADGQCCALLQGHESYVTFCQ 457
           G  L V   H   +  +    DG+R+++G+ D   ++W      C   LQGH + V   Q
Sbjct: 411 GQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQ 468

Query: 458 LEDEAAFTCSADCTIRKWDVLTGQCLQVFRGHTSIVNRILVTNNQLFSSSYDRTARAWSV 637
            +     + S D +IR WDV TG C+    GH S+ + + + +N L S + D T + W +
Sbjct: 469 FDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNILVSGNADSTVKIWDI 528

Query: 638 DKGQVSREFRG---HRNCVLTLAYSAPWDLPGAPCVEEAVAGGLLVTGSTDGTAKVWQVA 808
             GQ  +  +G   H++ V  L ++                   ++T S DGT K+W + 
Sbjct: 529 KTGQCLQTLQGPNKHQSAVTCLQFNK----------------NFVITSSDDGTVKLWDLK 572

Query: 809 SG 814
           +G
Sbjct: 573 TG 574



 Score = 66.2 bits (160), Expect = 4e-11
 Identities = 41/131 (31%), Positives = 59/131 (45%), Gaps = 1/131 (0%)
 Frame = +2

Query: 536 QVFRGHTS-IVNRILVTNNQLFSSSYDRTARAWSVDKGQVSREFRGHRNCVLTLAYSAPW 712
           +V +GH   ++  +    N++ S S D T + WS   G+  R   GH   V        W
Sbjct: 294 KVLKGHDDHVITCLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGV--------W 345

Query: 713 DLPGAPCVEEAVAGGLLVTGSTDGTAKVWQVASGCCHQTLRGHTGAVLCLVLDTPGHTAF 892
                      +   ++++GSTD T KVW   +G C  TL GHT  V C+ L        
Sbjct: 346 --------SSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHE--KRVV 395

Query: 893 TGSNDATIRAW 925
           +GS DAT+R W
Sbjct: 396 SGSRDATLRVW 406



 Score = 52.4 bits (124), Expect = 6e-07
 Identities = 30/89 (33%), Positives = 45/89 (50%), Gaps = 8/89 (8%)
 Frame = +2

Query: 353 LLTGSEDGTARLWSTADGQCCALLQG---HESYVTFCQLEDEAAFTCSADCTIRKWDVLT 523
           L++G+ D T ++W    GQC   LQG   H+S VT  Q       T S D T++ WD+ T
Sbjct: 514 LVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLWDLKT 573

Query: 524 GQCLQVF-----RGHTSIVNRILVTNNQL 595
           G+ ++        G   +V RI  +N +L
Sbjct: 574 GEFIRNLVTLESGGSGGVVWRIRASNTKL 602


>ref|NP_008882.2| transcription initiation factor TFIID subunit 5 [Homo sapiens].
          Length = 800

 Score =  108 bits (271), Expect = 5e-24
 Identities = 73/219 (33%), Positives = 95/219 (43%), Gaps = 4/219 (1%)
 Frame = +2

Query: 281  SALRVCADHRGGINWLSLSPDGQRLLTGSEDGTARLWSTADGQCCALLQGHESYVTFCQL 460
            S L++   H G +   S SPD   LL+ SEDGT RLWS     C    +GH   V   Q 
Sbjct: 534  SELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQF 593

Query: 461  EDEAAFTCSA--DCTIRKWDVLTGQCLQVFRGHTSIVN--RILVTNNQLFSSSYDRTARA 628
                 +  S   D   R W     Q L++F GH + VN  R    +N + + S DRT R 
Sbjct: 594  SPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRL 653

Query: 629  WSVDKGQVSREFRGHRNCVLTLAYSAPWDLPGAPCVEEAVAGGLLVTGSTDGTAKVWQVA 808
            W V  G   R F GH+  + +L +S                G  L TG+TDG   +W + 
Sbjct: 654  WDVLNGNCVRIFTGHKGPIHSLTFSPN--------------GRFLATGATDGRVLLWDIG 699

Query: 809  SGCCHQTLRGHTGAVLCLVLDTPGHTAFTGSNDATIRAW 925
             G     L+GHT  V  L     G    +GS D T+R W
Sbjct: 700  HGLMVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLW 738



 Score = 53.9 bits (128), Expect = 2e-07
 Identities = 30/85 (35%), Positives = 44/85 (51%), Gaps = 4/85 (4%)
 Frame = +2

Query: 278 GSALRVCADHRGGINWLSLSPDGQRLLTGSEDGTARLWSTADGQCCALLQGHESYVTFCQ 457
           G+ +R+   H+G I+ L+ SP+G+ L TG+ DG   LW    G     L+GH    T C 
Sbjct: 659 GNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTD--TVCS 716

Query: 458 L----EDEAAFTCSADCTIRKWDVL 520
           L    + E   + S D T+R WD +
Sbjct: 717 LRFSRDGEILASGSMDNTVRLWDAI 741


>ref|NP_000421.1| platelet-activating factor acetylhydrolase IB subunit alpha [Homo
           sapiens].
          Length = 410

 Score =  101 bits (251), Expect = 1e-21
 Identities = 66/228 (28%), Positives = 105/228 (46%), Gaps = 12/228 (5%)
 Frame = +2

Query: 278 GSALRVCADHRGGINWLSLSPDGQRLLTGSEDGTARLWSTADGQCCALLQGHESYVTFCQ 457
           G   R    H   +  +S    G+ L + S D T +LW     +C   + GH+  V+   
Sbjct: 140 GDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVA 199

Query: 458 L--EDEAAFTCSADCTIRKWDVLTGQCLQVFRGHTSIVNRILVTNNQ----LFSSSYDRT 619
           +    +   + S D TI+ W+V TG C++ F GH   V   +V  NQ    + S S D+T
Sbjct: 200 IMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVR--MVRPNQDGTLIASCSNDQT 257

Query: 620 ARAWSVDKGQVSREFRGHRNCVLTLA------YSAPWDLPGAPCVEEAVAGGLLVTGSTD 781
            R W V   +   E R H + V  ++      YS+  +  G+   +    G  L++GS D
Sbjct: 258 VRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRD 317

Query: 782 GTAKVWQVASGCCHQTLRGHTGAVLCLVLDTPGHTAFTGSNDATIRAW 925
            T K+W V++G C  TL GH   V  ++  + G    + ++D T+R W
Sbjct: 318 KTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVW 365



 Score = 71.6 bits (174), Expect = 9e-13
 Identities = 53/201 (26%), Positives = 82/201 (40%), Gaps = 26/201 (12%)
 Frame = +2

Query: 278 GSALRVCADHRGGINWLSLSPDGQRLLTGSEDGTARLWSTADGQCCALLQGHESYVTFCQ 457
           G  ++    HR  +  +  + DG  + + S D T R+W  A  +C A L+ HE  V    
Sbjct: 224 GYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECIS 283

Query: 458 LEDEAAFTC----------------------SADCTIRKWDVLTGQCLQVFRGHTSIVNR 571
              E++++                       S D TI+ WDV TG CL    GH + V  
Sbjct: 284 WAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRG 343

Query: 572 ILVTNNQLF--SSSYDRTARAWSVDKGQVSREFRGHRNCVLTLAY--SAPWDLPGAPCVE 739
           +L  +   F  S + D+T R W     +  +    H + V +L +  +AP+         
Sbjct: 344 VLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPY--------- 394

Query: 740 EAVAGGLLVTGSTDGTAKVWQ 802
                  +VTGS D T KVW+
Sbjct: 395 -------VVTGSVDQTVKVWE 408



 Score = 68.2 bits (165), Expect = 1e-11
 Identities = 53/172 (30%), Positives = 74/172 (43%), Gaps = 4/172 (2%)
 Frame = +2

Query: 422 LQGHESYVTFCQLEDEAAFTCSA--DCTIRKWDVLTGQCLQVFRGHTSIVNRILV--TNN 589
           L GH S VT        +   SA  D TI+ WD  TG   +  +GHT  V  I    +  
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK 163

Query: 590 QLFSSSYDRTARAWSVDKGQVSREFRGHRNCVLTLAYSAPWDLPGAPCVEEAVAGGLLVT 769
            L S S D T + W     +  R   GH + V ++A      +P          G  +V+
Sbjct: 164 LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAI-----MPN---------GDHIVS 209

Query: 770 GSTDGTAKVWQVASGCCHQTLRGHTGAVLCLVLDTPGHTAFTGSNDATIRAW 925
            S D T K+W+V +G C +T  GH   V  +  +  G    + SND T+R W
Sbjct: 210 ASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVW 261


>ref|NP_438172.1| WD repeat-containing protein 5 [Homo sapiens].
          Length = 334

 Score =  101 bits (251), Expect = 1e-21
 Identities = 63/223 (28%), Positives = 102/223 (45%), Gaps = 7/223 (3%)
 Frame = +2

Query: 278 GSALRVCADHRGGINWLSLSPDGQRLLTGSEDGTARLWSTADGQCCALLQGHESYVTFCQ 457
           G   +  + H+ GI+ ++ S D   L++ S+D T ++W  + G+C   L+GH +YV  C 
Sbjct: 77  GKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCN 136

Query: 458 LEDEAAFTCSA--DCTIRKWDVLTGQCLQVFRGHTSIVNRILVT--NNQLFSSSYDRTAR 625
              ++    S   D ++R WDV TG+CL+    H+  V+ +      + + SSSYD   R
Sbjct: 137 FNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCR 196

Query: 626 AWSVDKGQVSREFRGHRNCVLTLAYSAPWDLPGAPCVEEAVAGGLLVTGSTDGTAKVWQV 805
            W    GQ          C+ TL      D P    V+ +  G  ++  + D T K+W  
Sbjct: 197 IWDTASGQ----------CLKTLIDD---DNPPVSFVKFSPNGKYILAATLDNTLKLWDY 243

Query: 806 ASGCCHQTLRGHTGAVLCLVLD---TPGHTAFTGSNDATIRAW 925
           + G C +T  GH     C+  +   T G    +GS D  +  W
Sbjct: 244 SKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIW 286



 Score = 88.6 bits (218), Expect = 7e-18
 Identities = 62/243 (25%), Positives = 107/243 (44%), Gaps = 6/243 (2%)
 Frame = +2

Query: 215 PLPSGAQPAPGPRPTSRMGGGGSALR-VCADHRGGINWLSLSPDGQRLLTGSEDGTARLW 391
           P PS +     P P         AL+   A H   ++ +  SP+G+ L + S D   ++W
Sbjct: 17  PTPSSSATQSKPTPVKP----NYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIW 72

Query: 392 STADGQCCALLQGHESYVTFCQLEDEAAFTCSA--DCTIRKWDVLTGQCLQVFRGHTSIV 565
              DG+    + GH+  ++      ++    SA  D T++ WDV +G+CL+  +GH++ V
Sbjct: 73  GAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYV 132

Query: 566 --NRILVTNNQLFSSSYDRTARAWSVDKGQVSREFRGHRNCVLTLAYSAPWDLPGAPCVE 739
                   +N + S S+D + R W V  G+  +    H + V  + ++            
Sbjct: 133 FCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRD---------- 182

Query: 740 EAVAGGLLVTGSTDGTAKVWQVASGCCHQTLRGHTGAVLCLVLDTP-GHTAFTGSNDATI 916
               G L+V+ S DG  ++W  ASG C +TL       +  V  +P G      + D T+
Sbjct: 183 ----GSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTL 238

Query: 917 RAW 925
           + W
Sbjct: 239 KLW 241



 Score = 68.9 bits (167), Expect = 6e-12
 Identities = 44/183 (24%), Positives = 79/183 (43%), Gaps = 8/183 (4%)
 Frame = +2

Query: 278 GSALRVCADHRGGINWLSLSPDGQRLLTGSEDGTARLWSTADGQCC-ALLQGHESYVTFC 454
           G  L+    H   ++ +  + DG  +++ S DG  R+W TA GQC   L+      V+F 
Sbjct: 161 GKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFV 220

Query: 455 QLEDEAAFTCSA--DCTIRKWDVLTGQCLQVFRGHTS-----IVNRILVTNNQLFSSSYD 613
           +      +  +A  D T++ WD   G+CL+ + GH +       N  +     + S S D
Sbjct: 221 KFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSED 280

Query: 614 RTARAWSVDKGQVSREFRGHRNCVLTLAYSAPWDLPGAPCVEEAVAGGLLVTGSTDGTAK 793
                W++   ++ ++ +GH + V++ A             E  +A   L     D T K
Sbjct: 281 NLVYIWNLQTKEIVQKLQGHTDVVISTACHP---------TENIIASAAL---ENDKTIK 328

Query: 794 VWQ 802
           +W+
Sbjct: 329 LWK 331



 Score = 49.7 bits (117), Expect = 4e-06
 Identities = 30/122 (24%), Positives = 58/122 (47%), Gaps = 9/122 (7%)
 Frame = +2

Query: 302 DHRGGINWLSLSPDGQRLLTGSEDGTARLWSTADGQCCALLQGHES-----YVTFCQLED 466
           D    ++++  SP+G+ +L  + D T +LW  + G+C     GH++     +  F     
Sbjct: 212 DDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGG 271

Query: 467 EAAFTCSADCTIRKWDVLTGQCLQVFRGHTSIV--NRILVTNNQLFSSSY--DRTARAWS 634
           +   + S D  +  W++ T + +Q  +GHT +V       T N + S++   D+T + W 
Sbjct: 272 KWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLWK 331

Query: 635 VD 640
            D
Sbjct: 332 SD 333


>ref|NP_060058.1| WD repeat-containing protein 5 [Homo sapiens].
          Length = 334

 Score =  101 bits (251), Expect = 1e-21
 Identities = 63/223 (28%), Positives = 102/223 (45%), Gaps = 7/223 (3%)
 Frame = +2

Query: 278 GSALRVCADHRGGINWLSLSPDGQRLLTGSEDGTARLWSTADGQCCALLQGHESYVTFCQ 457
           G   +  + H+ GI+ ++ S D   L++ S+D T ++W  + G+C   L+GH +YV  C 
Sbjct: 77  GKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCN 136

Query: 458 LEDEAAFTCSA--DCTIRKWDVLTGQCLQVFRGHTSIVNRILVT--NNQLFSSSYDRTAR 625
              ++    S   D ++R WDV TG+CL+    H+  V+ +      + + SSSYD   R
Sbjct: 137 FNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCR 196

Query: 626 AWSVDKGQVSREFRGHRNCVLTLAYSAPWDLPGAPCVEEAVAGGLLVTGSTDGTAKVWQV 805
            W    GQ          C+ TL      D P    V+ +  G  ++  + D T K+W  
Sbjct: 197 IWDTASGQ----------CLKTLIDD---DNPPVSFVKFSPNGKYILAATLDNTLKLWDY 243

Query: 806 ASGCCHQTLRGHTGAVLCLVLD---TPGHTAFTGSNDATIRAW 925
           + G C +T  GH     C+  +   T G    +GS D  +  W
Sbjct: 244 SKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIW 286



 Score = 88.6 bits (218), Expect = 7e-18
 Identities = 62/243 (25%), Positives = 107/243 (44%), Gaps = 6/243 (2%)
 Frame = +2

Query: 215 PLPSGAQPAPGPRPTSRMGGGGSALR-VCADHRGGINWLSLSPDGQRLLTGSEDGTARLW 391
           P PS +     P P         AL+   A H   ++ +  SP+G+ L + S D   ++W
Sbjct: 17  PTPSSSATQSKPTPVKP----NYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIW 72

Query: 392 STADGQCCALLQGHESYVTFCQLEDEAAFTCSA--DCTIRKWDVLTGQCLQVFRGHTSIV 565
              DG+    + GH+  ++      ++    SA  D T++ WDV +G+CL+  +GH++ V
Sbjct: 73  GAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYV 132

Query: 566 --NRILVTNNQLFSSSYDRTARAWSVDKGQVSREFRGHRNCVLTLAYSAPWDLPGAPCVE 739
                   +N + S S+D + R W V  G+  +    H + V  + ++            
Sbjct: 133 FCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRD---------- 182

Query: 740 EAVAGGLLVTGSTDGTAKVWQVASGCCHQTLRGHTGAVLCLVLDTP-GHTAFTGSNDATI 916
               G L+V+ S DG  ++W  ASG C +TL       +  V  +P G      + D T+
Sbjct: 183 ----GSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTL 238

Query: 917 RAW 925
           + W
Sbjct: 239 KLW 241



 Score = 68.9 bits (167), Expect = 6e-12
 Identities = 44/183 (24%), Positives = 79/183 (43%), Gaps = 8/183 (4%)
 Frame = +2

Query: 278 GSALRVCADHRGGINWLSLSPDGQRLLTGSEDGTARLWSTADGQCC-ALLQGHESYVTFC 454
           G  L+    H   ++ +  + DG  +++ S DG  R+W TA GQC   L+      V+F 
Sbjct: 161 GKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFV 220

Query: 455 QLEDEAAFTCSA--DCTIRKWDVLTGQCLQVFRGHTS-----IVNRILVTNNQLFSSSYD 613
           +      +  +A  D T++ WD   G+CL+ + GH +       N  +     + S S D
Sbjct: 221 KFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSED 280

Query: 614 RTARAWSVDKGQVSREFRGHRNCVLTLAYSAPWDLPGAPCVEEAVAGGLLVTGSTDGTAK 793
                W++   ++ ++ +GH + V++ A             E  +A   L     D T K
Sbjct: 281 NLVYIWNLQTKEIVQKLQGHTDVVISTACHP---------TENIIASAAL---ENDKTIK 328

Query: 794 VWQ 802
           +W+
Sbjct: 329 LWK 331



 Score = 49.7 bits (117), Expect = 4e-06
 Identities = 30/122 (24%), Positives = 58/122 (47%), Gaps = 9/122 (7%)
 Frame = +2

Query: 302 DHRGGINWLSLSPDGQRLLTGSEDGTARLWSTADGQCCALLQGHES-----YVTFCQLED 466
           D    ++++  SP+G+ +L  + D T +LW  + G+C     GH++     +  F     
Sbjct: 212 DDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGG 271

Query: 467 EAAFTCSADCTIRKWDVLTGQCLQVFRGHTSIV--NRILVTNNQLFSSSY--DRTARAWS 634
           +   + S D  +  W++ T + +Q  +GHT +V       T N + S++   D+T + W 
Sbjct: 272 KWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLWK 331

Query: 635 VD 640
            D
Sbjct: 332 SD 333


>ref|NP_061942.2| WD repeat-containing protein 5B [Homo sapiens].
          Length = 330

 Score = 98.2 bits (243), Expect = 9e-21
 Identities = 62/214 (28%), Positives = 97/214 (45%), Gaps = 7/214 (3%)
 Frame = +2

Query: 305 HRGGINWLSLSPDGQRLLTGSEDGTARLWSTADGQCCALLQGHESYVTFCQLEDEAAFTC 484
           H   I+ ++ S D  RL++ S+D T +LW    G+C   L+GH +YV  C     +    
Sbjct: 82  HNLEISDVAWSSDSSRLVSASDDKTLKLWDVRSGKCLKTLKGHSNYVFCCNFNPPSNLII 141

Query: 485 SA--DCTIRKWDVLTGQCLQVFRGHTSIVNRI--LVTNNQLFSSSYDRTARAWSVDKGQV 652
           S   D T++ W+V TG+CL+    H+  V+ +    + + + S SYD   R W    GQ 
Sbjct: 142 SGSFDETVKIWEVKTGKCLKTLSAHSDPVSAVHFNCSGSLIVSGSYDGLCRIWDAASGQ- 200

Query: 653 SREFRGHRNCVLTLAYSAPWDLPGAPCVEEAVAGGLLVTGSTDGTAKVWQVASGCCHQTL 832
                    C+ TL      D P    V+ +  G  ++T + D T K+W  + G C +T 
Sbjct: 201 ---------CLKTLVDD---DNPPVSFVKFSPNGKYILTATLDNTLKLWDYSRGRCLKTY 248

Query: 833 RGHTGAVLCLVLD---TPGHTAFTGSNDATIRAW 925
            GH     C+  +   T G    +GS D  +  W
Sbjct: 249 TGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIW 282



 Score = 91.7 bits (226), Expect = 9e-19
 Identities = 57/212 (26%), Positives = 99/212 (46%), Gaps = 5/212 (2%)
 Frame = +2

Query: 305 HRGGINWLSLSPDGQRLLTGSEDGTARLWSTADGQCCALLQGHESYVTFCQLEDEAAFTC 484
           H   ++ +  SP+G+ L + S D    +W   DG+    L GH   ++      +++   
Sbjct: 40  HTEAVSSVKFSPNGEWLASSSADRLIIIWGAYDGKYEKTLYGHNLEISDVAWSSDSSRLV 99

Query: 485 SA--DCTIRKWDVLTGQCLQVFRGHTSIV--NRILVTNNQLFSSSYDRTARAWSVDKGQV 652
           SA  D T++ WDV +G+CL+  +GH++ V        +N + S S+D T + W V  G+ 
Sbjct: 100 SASDDKTLKLWDVRSGKCLKTLKGHSNYVFCCNFNPPSNLIISGSFDETVKIWEVKTGKC 159

Query: 653 SREFRGHRNCVLTLAYSAPWDLPGAPCVEEAVAGGLLVTGSTDGTAKVWQVASGCCHQTL 832
            +    H + V  + ++               +G L+V+GS DG  ++W  ASG C +TL
Sbjct: 160 LKTLSAHSDPVSAVHFNC--------------SGSLIVSGSYDGLCRIWDAASGQCLKTL 205

Query: 833 RGHTGAVLCLVLDTP-GHTAFTGSNDATIRAW 925
                  +  V  +P G    T + D T++ W
Sbjct: 206 VDDDNPPVSFVKFSPNGKYILTATLDNTLKLW 237



 Score = 72.4 bits (176), Expect = 5e-13
 Identities = 52/227 (22%), Positives = 91/227 (40%), Gaps = 11/227 (4%)
 Frame = +2

Query: 278 GSALRVCADHRGGINWLSLSPDGQRLLTGSEDGTARLWSTADGQCCALLQGHESYVTFCQ 457
           G  L+    H   +   + +P    +++GS D T ++W    G+C   L  H   V+   
Sbjct: 115 GKCLKTLKGHSNYVFCCNFNPPSNLIISGSFDETVKIWEVKTGKCLKTLSAHSDPVSAVH 174

Query: 458 LEDEAAFTCSA--DCTIRKWDVLTGQCLQVF----RGHTSIVNRILVTNNQLFSSSYDRT 619
                +   S   D   R WD  +GQCL+          S V +       + +++ D T
Sbjct: 175 FNCSGSLIVSGSYDGLCRIWDAASGQCLKTLVDDDNPPVSFV-KFSPNGKYILTATLDNT 233

Query: 620 ARAWSVDKGQVSREFRGHRN---CVLTLAYSAPWDLPGAPCVEEAVAGGLLVTGSTDGTA 790
            + W   +G+  + + GH+N   C+      A + + G         G  +V+GS D   
Sbjct: 234 LKLWDYSRGRCLKTYTGHKNEKYCIF-----ANFSVTG---------GKWIVSGSEDNLV 279

Query: 791 KVWQVASGCCHQTLRGHTGAVLCLVLDTPGHTAFTGS--NDATIRAW 925
            +W + +    Q L+GHT  V+        +   + +  ND TI+ W
Sbjct: 280 YIWNLQTKEIVQKLQGHTDVVISAACHPTENLIASAALENDKTIKLW 326



 Score = 70.1 bits (170), Expect = 3e-12
 Identities = 45/172 (26%), Positives = 77/172 (44%), Gaps = 4/172 (2%)
 Frame = +2

Query: 422 LQGHESYVTFCQLEDEAAF--TCSADCTIRKWDVLTGQCLQVFRGHTSIVNRILVTNN-- 589
           L GH   V+  +      +  + SAD  I  W    G+  +   GH   ++ +  +++  
Sbjct: 37  LVGHTEAVSSVKFSPNGEWLASSSADRLIIIWGAYDGKYEKTLYGHNLEISDVAWSSDSS 96

Query: 590 QLFSSSYDRTARAWSVDKGQVSREFRGHRNCVLTLAYSAPWDLPGAPCVEEAVAGGLLVT 769
           +L S+S D+T + W V  G+  +  +GH N V    ++ P                L+++
Sbjct: 97  RLVSASDDKTLKLWDVRSGKCLKTLKGHSNYVFCCNFNPP--------------SNLIIS 142

Query: 770 GSTDGTAKVWQVASGCCHQTLRGHTGAVLCLVLDTPGHTAFTGSNDATIRAW 925
           GS D T K+W+V +G C +TL  H+  V  +  +  G    +GS D   R W
Sbjct: 143 GSFDETVKIWEVKTGKCLKTLSAHSDPVSAVHFNCSGSLIVSGSYDGLCRIW 194


  Database: RefSeq49_HP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 18,297,164
  Number of sequences in database:  32,964
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 32964
Number of Hits to DB: 38,283,985
Number of extensions: 1211911
Number of successful extensions: 10589
Number of sequences better than 1.0e-05: 107
Number of HSP's gapped: 9357
Number of HSP's successfully gapped: 268
Length of query: 308
Length of database: 18,297,164
Length adjustment: 102
Effective length of query: 206
Effective length of database: 14,934,836
Effective search space: 3076576216
Effective search space used: 3076576216
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)

BLASTN 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-013843
         (926 letters)

Database: Sscrofa_10.2.fasta 
           4582 sequences; 2,808,509,378 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Sscrofa_Chr18                                                         688   0.0  

>Sscrofa_Chr18 
||          Length = 61220071

 Score =  688 bits (347), Expect = 0.0
 Identities = 356/359 (99%)
 Strand = Plus / Plus

                                                                           
Query: 568     caggatcctggtcaccaacaaccagctcttcagcagttcctatgaccggacagctcgcgc 627
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6342689 caggatcctggtcaccaacaaccagctcttcagcagttcctatgaccggacagctcgcgc 6342748

                                                                           
Query: 628     ctggagtgtagacaaagggcaggtgtcgcgggagttccggggccaccgcaactgtgtgct 687
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6342749 ctggagtgtagacaaagggcaggtgtcgcgggagttccggggccaccgcaactgtgtgct 6342808

                                                                           
Query: 688     gactctagcctactctgccccctgggacctgcctggggctccctgcgtggaggaggccgt 747
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6342809 gactctagcctactctgccccctgggacctgcctggggctccctgcgtggaggaggccgt 6342868

                                                                           
Query: 748     ggctggggggcttctggtgacgggaagcacagacggcacagccaaggtgtggcaggtggc 807
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6342869 ggctggggggcttctggtgacgggaagcacagacggcacagccaaggtgtggcaggtggc 6342928

                                                                           
Query: 808     cagtggctgctgccaccagacgctgcgggggcacacgggcgccgtgctctgcctggtgtt 867
               |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 6342929 cagtggctgctgccaccagacgctgcggggccacacgggcgccgtgctctgcctggtgtt 6342988

                                                                          
Query: 868     ggacacacctgggcacacagccttcaccggcagcaacgacgccaccatccgcgcctggg 926
               |||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 6342989 ggacacacctggccacacagccttcaccggcagcaccgacgccaccatccgcgcctggg 6343047



 Score =  500 bits (252), Expect = e-139
 Identities = 252/252 (100%)
 Strand = Plus / Minus

                                                                           
Query: 178     agccttagggagctgctgccgcgtgggtgccggggcgcccctccctagcggggcgcagcc 237
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6333239 agccttagggagctgctgccgcgtgggtgccggggcgcccctccctagcggggcgcagcc 6333180

                                                                           
Query: 238     tgcgcccggtccccgcccgaccagcagaatggggggcggagggtctgccctgagggtctg 297
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6333179 tgcgcccggtccccgcccgaccagcagaatggggggcggagggtctgccctgagggtctg 6333120

                                                                           
Query: 298     cgcggaccaccgcgggggcatcaactggctcagcctgagccccgacgggcagcgcctgct 357
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6333119 cgcggaccaccgcgggggcatcaactggctcagcctgagccccgacgggcagcgcctgct 6333060

                                                                           
Query: 358     gacgggcagcgaggacggcaccgcccggctctggagcaccgcggacggccagtgctgcgc 417
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6333059 gacgggcagcgaggacggcaccgcccggctctggagcaccgcggacggccagtgctgcgc 6333000

                           
Query: 418     cctcctgcaagg 429
               ||||||||||||
Sbjct: 6332999 cctcctgcaagg 6332988



 Score =  278 bits (140), Expect = 5e-72
 Identities = 140/140 (100%)
 Strand = Plus / Minus

                                                                           
Query: 1       gtattgttcggcgcccggcagtcgagagcgcacagcgcggggctacgagggtgcgcagtt 60
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6333609 gtattgttcggcgcccggcagtcgagagcgcacagcgcggggctacgagggtgcgcagtt 6333550

                                                                           
Query: 61      ccccgggtcccccgagtccccgacgcccggcgaggagatctgggttttccagcgcgcccc 120
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6333549 ccccgggtcccccgagtccccgacgcccggcgaggagatctgggttttccagcgcgcccc 6333490

                                   
Query: 121     gcgagacgcctctgctcagg 140
               ||||||||||||||||||||
Sbjct: 6333489 gcgagacgcctctgctcagg 6333470


  Database: Sscrofa_10.2.fasta
    Posted date:  Nov 16, 2011 10:34 AM
  Number of letters in database: 2,808,509,378
  Number of sequences in database:  4582
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4582
Number of Hits to DB: 17,687,652
Number of extensions: 111
Number of successful extensions: 111
Number of sequences better than 1.0e-05: 1
Number of HSP's gapped: 111
Number of HSP's successfully gapped: 3
Length of query: 926
Length of database: 2,808,509,378
Length adjustment: 21
Effective length of query: 905
Effective length of database: 2,808,413,156
Effective search space: 2541613906180
Effective search space used: 2541613906180
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 18 (36.2 bits)
S2: 29 (58.0 bits)