Search to RefSeqCP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-013971
(1082 letters)
Database: RefSeq49_CP.fasta
33,336 sequences; 18,874,504 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001003334.1| cytochrome P450 2C41 [Canis lupus familiaris]. 414 e-116
Alignment gi|NP_001183973.1| cytochrome P450 2C21 [Canis lupus familiaris]. 369 e-102
Alignment gi|XP_855301.1| PREDICTED: similar to cytochrome P450, family 2... 291 1e-78
Alignment gi|XP_541606.2| PREDICTED: similar to Cytochrome P450 2G1 (CYPI... 285 4e-77
Alignment gi|NP_001003339.1| cytochrome P450 2E1 [Canis lupus familiaris]. 284 1e-76
Alignment gi|XP_533661.2| PREDICTED: similar to cytochrome P450 monooxyge... 264 1e-70
Alignment gi|NP_001006653.1| cytochrome P450 2B11 [Canis lupus familiaris]. 260 2e-69
Alignment gi|XP_855605.1| PREDICTED: cytochrome P450 2B11 [Canis familiar... 260 2e-69
Alignment gi|NP_001041492.1| hypothetical protein LOC484493 [Canis lupus ... 252 5e-67
Alignment gi|NP_001032422.1| cytochrome P450 family 2 subfamily A polypep... 251 6e-67
>ref|NP_001003334.1| cytochrome P450 2C41 [Canis lupus familiaris].
Length = 489
Score = 414 bits (1065), Expect = e-116
Identities = 202/266 (75%), Positives = 225/266 (84%)
Frame = +3
Query: 249 WKQNSGKGRLPPGPTPLSILGNILQLDVKDISKSLSNLSKVYGPVFTVYFGLKPAVVLHG 428
WKQ+S KG+LPPGPTPL +GNILQLD KDI+KSLSNLSK YGPVFT+YFG+KP VVLHG
Sbjct: 20 WKQSSRKGKLPPGPTPLPFIGNILQLD-KDINKSLSNLSKAYGPVFTLYFGMKPTVVLHG 78
Query: 429 YEAVKEALIDGGEEFSGRGHFPMAERVNKGHGIIFSSGKRWKETRRFSLMTLRNFGMGKR 608
Y+AVKE LID GEEFS RG FP+AE+V+ GHGIIF+SG RWKE RRF+L TLRN GMGK
Sbjct: 79 YDAVKETLIDLGEEFSARGRFPIAEKVSGGHGIIFTSGNRWKEMRRFALTTLRNLGMGKS 138
Query: 609 SIEERVQEEARCLVEELRKTNASPCDPTFLLGCAPCNVICSIIFHNRFDYTDPNFLTLLE 788
+E RVQEEA LVEELRKTNA PCDPTF+LGCA CNVICSIIF NRFDYTD + LE
Sbjct: 139 DLESRVQEEACYLVEELRKTNALPCDPTFVLGCASCNVICSIIFQNRFDYTDQTLIGFLE 198
Query: 789 KLNENFRILSSPWIQVCNNFPALIDYLPGSHNKVLKNSAYVKSYILEKVKEHQASLDVND 968
KLNENFRILSSPWIQ N+FPAL+ YLPGSHN + KN A++KSYILEK+KEHQ S DVN+
Sbjct: 199 KLNENFRILSSPWIQAYNSFPALLHYLPGSHNTIFKNFAFIKSYILEKIKEHQESFDVNN 258
Query: 969 PRDFIDCFLIQMEQEKHNHQGGHFTF 1046
PRDFID FLI+MEQEKHN Q FTF
Sbjct: 259 PRDFIDYFLIKMEQEKHN-QPLEFTF 283
>ref|NP_001183973.1| cytochrome P450 2C21 [Canis lupus familiaris].
Length = 490
Score = 369 bits (948), Expect = e-102
Identities = 174/260 (66%), Positives = 214/260 (82%)
Frame = +3
Query: 249 WKQNSGKGRLPPGPTPLSILGNILQLDVKDISKSLSNLSKVYGPVFTVYFGLKPAVVLHG 428
W QN KG+LPPGPTPL I+GNILQ++ K++SKSLS L++ YGPVFTVYFG+KP VVL+G
Sbjct: 20 WNQNRAKGKLPPGPTPLPIIGNILQINTKNVSKSLSKLAENYGPVFTVYFGMKPTVVLYG 79
Query: 429 YEAVKEALIDGGEEFSGRGHFPMAERVNKGHGIIFSSGKRWKETRRFSLMTLRNFGMGKR 608
YEAVKEALID EEFSGRGHFP+ + +G GI+FS+G++WK+TRRFSL LRN GMGK+
Sbjct: 80 YEAVKEALIDRSEEFSGRGHFPLLDWTIQGLGIVFSNGEKWKQTRRFSLTVLRNMGMGKK 139
Query: 609 SIEERVQEEARCLVEELRKTNASPCDPTFLLGCAPCNVICSIIFHNRFDYTDPNFLTLLE 788
++E+R+QEEA LVE L+KTNASPCDPTFLLGCAPCNVICSIIF NRF+Y D +FLTLLE
Sbjct: 140 TVEDRIQEEALYLVEALKKTNASPCDPTFLLGCAPCNVICSIIFQNRFEYDDKDFLTLLE 199
Query: 789 KLNENFRILSSPWIQVCNNFPALIDYLPGSHNKVLKNSAYVKSYILEKVKEHQASLDVND 968
+EN I S+ WIQ+ N FP LI YLPGSH+ + KN A +I EK+KEH+ SL+ ++
Sbjct: 200 YFHENLLISSTSWIQLYNAFPLLIHYLPGSHHVLFKNIANQFKFISEKIKEHEESLNFSN 259
Query: 969 PRDFIDCFLIQMEQEKHNHQ 1028
PRDFID FLI++E+EKHN Q
Sbjct: 260 PRDFIDYFLIKIEKEKHNKQ 279
>ref|XP_855301.1| PREDICTED: similar to cytochrome P450, family 2, subfamily F,
polypeptide 1 [Canis familiaris].
Length = 582
Score = 291 bits (744), Expect = 1e-78
Identities = 141/257 (54%), Positives = 184/257 (71%), Gaps = 3/257 (1%)
Frame = +3
Query: 264 GKGRLPPGPTPLSILGNILQLDVKDISKSLSNLSKVYGPVFTVYFGLKPAVVLHGYEAVK 443
GK +LPPGP PL LGN+LQL +D+ SL+ LSK YG V+TV+ G + VVL GY+AVK
Sbjct: 101 GKSQLPPGPRPLPFLGNLLQLRSQDMLTSLTKLSKEYGSVYTVHLGPRRVVVLSGYQAVK 160
Query: 444 EALIDGGEEFSGRGHFPMAERVNKGHGIIFSSGKRWKETRRFSLMTLRNFGMGKRSIEER 623
EAL+D GE+FSGRG +P+ KG+GI FS+G RWK RRFS+ LRNFGMGKRSIEER
Sbjct: 161 EALVDQGEDFSGRGDYPVFFNFTKGNGIAFSNGDRWKVLRRFSVQILRNFGMGKRSIEER 220
Query: 624 VQEEARCLVEELRKTNASPCDPTFLLGCAPCNVICSIIFHNRFDYTDPNFLTLLEKLNEN 803
+ EE L+ ELRKT P DPTF+L + N+ICS+IF +RFDY D LT++ +N+N
Sbjct: 221 ILEEGSFLLAELRKTEGKPFDPTFVLSRSVSNIICSVIFGSRFDYDDERLLTIIRLINDN 280
Query: 804 FRILSSPWIQVCNNFPALIDYLPGSHNKVLKNSAYVKSYILEKVKEHQASLDVNDPRDFI 983
F+I+S PW ++ N FP+L+D++PG H ++ +N +K I V++HQ SLD PRDFI
Sbjct: 281 FQIMSGPWGELYNIFPSLLDWIPGPHRRLFQNFGCMKDLIARSVRDHQDSLDPRCPRDFI 340
Query: 984 DCFLIQMEQEK---HNH 1025
DCFL +M QEK H+H
Sbjct: 341 DCFLNKMAQEKQDPHSH 357
>ref|XP_541606.2| PREDICTED: similar to Cytochrome P450 2G1 (CYPIIG1) (P450-OLF1)
(Olfactive) [Canis familiaris].
Length = 494
Score = 285 bits (730), Expect = 4e-77
Identities = 137/258 (53%), Positives = 183/258 (70%)
Frame = +3
Query: 249 WKQNSGKGRLPPGPTPLSILGNILQLDVKDISKSLSNLSKVYGPVFTVYFGLKPAVVLHG 428
WK+NS G+LPPGPTP+ LGN+LQ+ +S L + YGP+FTVY G +P VVL G
Sbjct: 24 WKRNSKGGKLPPGPTPIPFLGNVLQVRTDATFQSFMKLREKYGPIFTVYMGPRPVVVLCG 83
Query: 429 YEAVKEALIDGGEEFSGRGHFPMAERVNKGHGIIFSSGKRWKETRRFSLMTLRNFGMGKR 608
+EAVKEAL+D +EFSGRG ER +GHG+ ++G+RW+ RRFSL LR+FGMGKR
Sbjct: 84 HEAVKEALVDRADEFSGRGELASIERNFQGHGVALANGERWRILRRFSLTILRDFGMGKR 143
Query: 609 SIEERVQEEARCLVEELRKTNASPCDPTFLLGCAPCNVICSIIFHNRFDYTDPNFLTLLE 788
SIEER+QEEA L+EELRKT SP +PTF L NVI S++F +RFDY D FL LL+
Sbjct: 144 SIEERIQEEAGFLLEELRKTKGSPIEPTFFLSRTVSNVISSVVFGSRFDYEDKQFLKLLQ 203
Query: 789 KLNENFRILSSPWIQVCNNFPALIDYLPGSHNKVLKNSAYVKSYILEKVKEHQASLDVND 968
+NE+F +S+PW Q+ + + ++ YLPG HN++ +K +I +VK ++ASLD +
Sbjct: 204 MINESFIEMSTPWAQLYDMYSGIMQYLPGRHNRIYYLIEELKDFIASRVKINEASLDPQN 263
Query: 969 PRDFIDCFLIQMEQEKHN 1022
PRDFIDCFLI+M Q+ +N
Sbjct: 264 PRDFIDCFLIKMHQDTNN 281
>ref|NP_001003339.1| cytochrome P450 2E1 [Canis lupus familiaris].
Length = 494
Score = 284 bits (726), Expect = 1e-76
Identities = 139/257 (54%), Positives = 182/257 (70%)
Frame = +3
Query: 249 WKQNSGKGRLPPGPTPLSILGNILQLDVKDISKSLSNLSKVYGPVFTVYFGLKPAVVLHG 428
WKQ + +LPPGP PL I+GNILQ+D+K++ KSL+ L++ YGPVFT+Y G + VVLHG
Sbjct: 23 WKQIYSRWKLPPGPFPLPIIGNILQVDIKNVPKSLAKLAEQYGPVFTLYLGSQRTVVLHG 82
Query: 429 YEAVKEALIDGGEEFSGRGHFPMAERVNKGHGIIFSSGKRWKETRRFSLMTLRNFGMGKR 608
Y+AVKE L+D + SGRG A + +K GI F++G WK+TRR SL TLR++GMGKR
Sbjct: 83 YKAVKEVLLDHKNDLSGRGEV-FAFQSHKDRGITFNNGPGWKDTRRLSLSTLRDYGMGKR 141
Query: 609 SIEERVQEEARCLVEELRKTNASPCDPTFLLGCAPCNVICSIIFHNRFDYTDPNFLTLLE 788
EER+Q E L+E LR T P DPTFLLG AP NVI I+FH FDY+D L + +
Sbjct: 142 GNEERIQREIPFLLEALRGTRGQPFDPTFLLGFAPFNVIADILFHKHFDYSDQTGLRIQK 201
Query: 789 KLNENFRILSSPWIQVCNNFPALIDYLPGSHNKVLKNSAYVKSYILEKVKEHQASLDVND 968
NENF +LS+ W+Q+ N FP+ + YLPGSH KVL+N A +K Y LE+VKEHQ SLD
Sbjct: 202 LFNENFHLLSTGWLQLYNIFPSYLHYLPGSHRKVLRNVAELKDYSLERVKEHQESLDPTC 261
Query: 969 PRDFIDCFLIQMEQEKH 1019
RDF DC L ++++E++
Sbjct: 262 SRDFTDCLLQELQKERY 278
>ref|XP_533661.2| PREDICTED: similar to cytochrome P450 monooxygenase CYP2T1 [Canis
familiaris].
Length = 495
Score = 264 bits (674), Expect = 1e-70
Identities = 127/258 (49%), Positives = 179/258 (69%)
Frame = +3
Query: 267 KGRLPPGPTPLSILGNILQLDVKDISKSLSNLSKVYGPVFTVYFGLKPAVVLHGYEAVKE 446
+G LPPGPTPL +LGN+LQL+ + + ++L LS +GPVFTV G +PAVVL GY A+++
Sbjct: 31 QGALPPGPTPLPLLGNLLQLESRRLDRALMELSGRWGPVFTVRLGPRPAVVLCGYSALRD 90
Query: 447 ALIDGGEEFSGRGHFPMAERVNKGHGIIFSSGKRWKETRRFSLMTLRNFGMGKRSIEERV 626
AL+ + FSGRG + ER G+GI+FS+G RW+ R F+L L+ FG+G R+IEER+
Sbjct: 91 ALVLQADAFSGRGAMAVFERFTHGNGIVFSNGLRWRTLRNFALGALKEFGLGTRTIEERI 150
Query: 627 QEEARCLVEELRKTNASPCDPTFLLGCAPCNVICSIIFHNRFDYTDPNFLTLLEKLNENF 806
EEA CL+ E + T +P DP LLG A NVICS++F NR+ Y DP F LL+ N+NF
Sbjct: 151 LEEAACLLGEFQATTGAPFDPRRLLGNAVSNVICSVVFGNRYGYEDPEFQRLLDLFNDNF 210
Query: 807 RILSSPWIQVCNNFPALIDYLPGSHNKVLKNSAYVKSYILEKVKEHQASLDVNDPRDFID 986
RI+SS W ++ N FP L+D+LPG H+++ +N ++ +I E+++ HQ + PRDFID
Sbjct: 211 RIMSSRWGEMYNVFPTLLDWLPGPHHRIFQNFTELRVFISEQIQRHQQTRQPGKPRDFID 270
Query: 987 CFLIQMEQEKHNHQGGHF 1040
CFL QM++E+ N HF
Sbjct: 271 CFLDQMDKEQ-NDPESHF 287
>ref|NP_001006653.1| cytochrome P450 2B11 [Canis lupus familiaris].
Length = 494
Score = 260 bits (664), Expect = 2e-69
Identities = 126/249 (50%), Positives = 171/249 (68%)
Frame = +3
Query: 270 GRLPPGPTPLSILGNILQLDVKDISKSLSNLSKVYGPVFTVYFGLKPAVVLHGYEAVKEA 449
G LPPGP PL ILGN LQ+D K + KS L + YG VFTVY G + V+L G +A++EA
Sbjct: 28 GHLPPGPRPLPILGNFLQMDRKGLLKSFLRLQEKYGDVFTVYLGPRRTVMLCGIDAIREA 87
Query: 450 LIDGGEEFSGRGHFPMAERVNKGHGIIFSSGKRWKETRRFSLMTLRNFGMGKRSIEERVQ 629
L+D E FSGRG + E V +G+G++F++G+RWK RRFSL T+R+FGMGKRS+EER+Q
Sbjct: 88 LVDNAEAFSGRGKIAVVEPVFQGYGVVFANGERWKTLRRFSLATMRDFGMGKRSVEERIQ 147
Query: 630 EEARCLVEELRKTNASPCDPTFLLGCAPCNVICSIIFHNRFDYTDPNFLTLLEKLNENFR 809
EEA+CLVEELRKT DPTF N+ICSI+F RF Y DP FL L+ +F
Sbjct: 148 EEAQCLVEELRKTEGVLQDPTFFFHSMTANIICSIVFGKRFGYKDPEFLRLMNLFYVSFA 207
Query: 810 ILSSPWIQVCNNFPALIDYLPGSHNKVLKNSAYVKSYILEKVKEHQASLDVNDPRDFIDC 989
++SS Q+ F + + Y PG+H +V N +K++I V++H+ +LD + PRDFID
Sbjct: 208 LISSFSSQMFELFHSFLKYFPGTHRQVYNNLQEIKAFIARMVEKHRETLDPSAPRDFIDA 267
Query: 990 FLIQMEQEK 1016
+LI+M++EK
Sbjct: 268 YLIRMDKEK 276
>ref|XP_855605.1| PREDICTED: cytochrome P450 2B11 [Canis familiaris].
Length = 494
Score = 260 bits (664), Expect = 2e-69
Identities = 126/249 (50%), Positives = 171/249 (68%)
Frame = +3
Query: 270 GRLPPGPTPLSILGNILQLDVKDISKSLSNLSKVYGPVFTVYFGLKPAVVLHGYEAVKEA 449
G LPPGP PL ILGN LQ+D K + KS L + YG VFTVY G + V+L G +A++EA
Sbjct: 28 GHLPPGPRPLPILGNFLQMDRKGLLKSFLRLQEKYGDVFTVYLGPRRTVMLCGIDAIREA 87
Query: 450 LIDGGEEFSGRGHFPMAERVNKGHGIIFSSGKRWKETRRFSLMTLRNFGMGKRSIEERVQ 629
L+D E FSGRG + E V +G+G++F++G+RWK RRFSL T+R+FGMGKRS+EER+Q
Sbjct: 88 LVDNAEAFSGRGKIAVVEPVFQGYGVVFANGERWKTLRRFSLATMRDFGMGKRSVEERIQ 147
Query: 630 EEARCLVEELRKTNASPCDPTFLLGCAPCNVICSIIFHNRFDYTDPNFLTLLEKLNENFR 809
EEA+CLVEELRKT DPTF N+ICSI+F RF Y DP FL L+ +F
Sbjct: 148 EEAQCLVEELRKTEGVLQDPTFFFHSMTANIICSIVFGKRFGYKDPEFLRLMNLFYVSFA 207
Query: 810 ILSSPWIQVCNNFPALIDYLPGSHNKVLKNSAYVKSYILEKVKEHQASLDVNDPRDFIDC 989
++SS Q+ F + + Y PG+H +V N +K++I V++H+ +LD + PRDFID
Sbjct: 208 LISSFSSQMFELFHSFLKYFPGTHRQVYNNLQEIKAFIARMVEKHRETLDPSAPRDFIDA 267
Query: 990 FLIQMEQEK 1016
+LI+M++EK
Sbjct: 268 YLIRMDKEK 276
>ref|NP_001041492.1| hypothetical protein LOC484493 [Canis lupus familiaris].
Length = 494
Score = 252 bits (643), Expect = 5e-67
Identities = 125/250 (50%), Positives = 176/250 (70%)
Frame = +3
Query: 273 RLPPGPTPLSILGNILQLDVKDISKSLSNLSKVYGPVFTVYFGLKPAVVLHGYEAVKEAL 452
+LPPGPTPL +GN LQL+++ +S S +SK YGPVFT++ G + VVL GYEAVKEAL
Sbjct: 32 KLPPGPTPLPFIGNYLQLNIQQMSDSFMKISKRYGPVFTIHLGPRRVVVLCGYEAVKEAL 91
Query: 453 IDGGEEFSGRGHFPMAERVNKGHGIIFSSGKRWKETRRFSLMTLRNFGMGKRSIEERVQE 632
+D EEFSGRG + + KG+G+ FS+G+R K+ RRFS+ TLR+FG+GKR IEER+QE
Sbjct: 92 VDQAEEFSGRGAQATFDTLFKGYGVTFSNGERAKQLRRFSITTLRDFGVGKRGIEERIQE 151
Query: 633 EARCLVEELRKTNASPCDPTFLLGCAPCNVICSIIFHNRFDYTDPNFLTLLEKLNENFRI 812
EA L+E L+ T + DPTF L NVI SI+F +RFDY D FL+LL + +F+
Sbjct: 152 EAGFLIEALQGTRGAFIDPTFFLSRTVSNVISSIVFGDRFDYEDKEFLSLLRMMLGSFQF 211
Query: 813 LSSPWIQVCNNFPALIDYLPGSHNKVLKNSAYVKSYILEKVKEHQASLDVNDPRDFIDCF 992
++ Q+C F ++I YLPG + +K ++ +I +KV+++Q +LD N PRDFID F
Sbjct: 212 TATSMGQLCEMFHSVIKYLPGPQQQAIKELQGLEDFITKKVEQNQRTLDPNSPRDFIDSF 271
Query: 993 LIQMEQEKHN 1022
LI+M++E++N
Sbjct: 272 LIRMQEEQNN 281
>ref|NP_001032422.1| cytochrome P450 family 2 subfamily A polypeptide 13 [Canis lupus
familiaris].
Length = 494
Score = 251 bits (642), Expect = 6e-67
Identities = 126/258 (48%), Positives = 178/258 (68%)
Frame = +3
Query: 249 WKQNSGKGRLPPGPTPLSILGNILQLDVKDISKSLSNLSKVYGPVFTVYFGLKPAVVLHG 428
WKQ G+LPPGPTPL +GN LQL+ + + SL +S+ YGPVFT++ G +P VVL G
Sbjct: 24 WKQRKLGGKLPPGPTPLPFIGNYLQLNTEQMYNSLMKISERYGPVFTIHLGPRPVVVLCG 83
Query: 429 YEAVKEALIDGGEEFSGRGHFPMAERVNKGHGIIFSSGKRWKETRRFSLMTLRNFGMGKR 608
+EAVKEAL+D EEFSGRG + + KG+G+ FS+G+R K+ RRFS+ TLR+FG+GKR
Sbjct: 84 HEAVKEALVDQAEEFSGRGEQATFDWLFKGYGVAFSNGERAKQLRRFSITTLRDFGVGKR 143
Query: 609 SIEERVQEEARCLVEELRKTNASPCDPTFLLGCAPCNVICSIIFHNRFDYTDPNFLTLLE 788
IEER+QEEA L+E LR T + DPTF L NVI SI+F +RFDY D FL+LL
Sbjct: 144 GIEERIQEEAGFLIEALRGTRGAFIDPTFFLSRTVSNVISSIVFGDRFDYEDKEFLSLLR 203
Query: 789 KLNENFRILSSPWIQVCNNFPALIDYLPGSHNKVLKNSAYVKSYILEKVKEHQASLDVND 968
+ +F+ ++ Q+ F +++ +LPG + K ++ +I +KV+++Q +LD N
Sbjct: 204 MMLGSFQFTATSMGQLYEMFYSVMKHLPGPQQQAFKELQGLEDFITKKVEQNQRTLDPNS 263
Query: 969 PRDFIDCFLIQMEQEKHN 1022
PRDFID FLI+M++E++N
Sbjct: 264 PRDFIDSFLIRMQEEQNN 281
Database: RefSeq49_CP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,874,504
Number of sequences in database: 33,336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33336
Number of Hits to DB: 41,421,645
Number of extensions: 1082814
Number of successful extensions: 3266
Number of sequences better than 1.0e-05: 22
Number of HSP's gapped: 3253
Number of HSP's successfully gapped: 22
Length of query: 360
Length of database: 18,874,504
Length adjustment: 104
Effective length of query: 256
Effective length of database: 15,407,560
Effective search space: 3944335360
Effective search space used: 3944335360
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to RefSeqBP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-013971
(1082 letters)
Database: RefSeq49_BP.fasta
33,088 sequences; 17,681,374 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001069519.1| cytochrome P450, family 2, subfamily C, poly... 463 e-130
Alignment gi|XP_002698442.1| PREDICTED: cytochrome P450 family 2 subfamil... 446 e-125
Alignment gi|XP_581757.3| PREDICTED: cytochrome P450 family 2 subfamily C... 446 e-125
Alignment gi|NP_001069895.1| cytochrome P450, family 2, subfamily C, poly... 433 e-121
Alignment gi|XP_002698439.1| PREDICTED: cytochrome P450, family 2, subfam... 425 e-119
Alignment gi|XP_612374.2| PREDICTED: cytochrome P450, family 2, subfamily... 425 e-119
Alignment gi|XP_002698440.1| PREDICTED: cytochrome P450, family 2, subfam... 423 e-118
Alignment gi|NP_001103262.1| cytochrome P450, family 2, subfamily C, poly... 374 e-104
Alignment gi|XP_002698445.1| PREDICTED: cytochrome P450, family 2, subfam... 372 e-103
Alignment gi|XP_001252335.1| PREDICTED: cytochrome P450, family 2, subfam... 372 e-103
>ref|NP_001069519.1| cytochrome P450, family 2, subfamily C, polypeptide 18 [Bos taurus].
Length = 490
Score = 463 bits (1192), Expect = e-130
Identities = 218/266 (81%), Positives = 241/266 (90%)
Frame = +3
Query: 249 WKQNSGKGRLPPGPTPLSILGNILQLDVKDISKSLSNLSKVYGPVFTVYFGLKPAVVLHG 428
WKQ+SGKG+LPPGPTPL ILGNILQLDVK+I KSLSNLS YGPVFTVYFGL+P VVLHG
Sbjct: 20 WKQSSGKGKLPPGPTPLPILGNILQLDVKNIGKSLSNLSNTYGPVFTVYFGLRPTVVLHG 79
Query: 429 YEAVKEALIDGGEEFSGRGHFPMAERVNKGHGIIFSSGKRWKETRRFSLMTLRNFGMGKR 608
YEAVKEALID GEEFSGRG+ PM++RVNKG+GIIFS+GKRWKE RRFSLMTLRNFGMGKR
Sbjct: 80 YEAVKEALIDQGEEFSGRGNIPMSQRVNKGYGIIFSNGKRWKEIRRFSLMTLRNFGMGKR 139
Query: 609 SIEERVQEEARCLVEELRKTNASPCDPTFLLGCAPCNVICSIIFHNRFDYTDPNFLTLLE 788
SIE+RVQEEA CLVEELRKTN SPCDPTF+LGCAPCNVICSIIF NRFDYTD NFL LL+
Sbjct: 140 SIEDRVQEEAHCLVEELRKTNGSPCDPTFILGCAPCNVICSIIFQNRFDYTDQNFLNLLD 199
Query: 789 KLNENFRILSSPWIQVCNNFPALIDYLPGSHNKVLKNSAYVKSYILEKVKEHQASLDVND 968
K NEN ++ SSPW+QVCN FP LIDY PGSHNK+ KN AY++SY+LEKVKEHQA+LD+N+
Sbjct: 200 KFNENLQVASSPWMQVCNTFPILIDYFPGSHNKLFKNFAYIRSYVLEKVKEHQATLDINN 259
Query: 969 PRDFIDCFLIQMEQEKHNHQGGHFTF 1046
PRDFIDCFLI+MEQEKHN Q FTF
Sbjct: 260 PRDFIDCFLIKMEQEKHN-QEMEFTF 284
>ref|XP_002698442.1| PREDICTED: cytochrome P450 family 2 subfamily C polypeptide 18-like
isoform 1 [Bos taurus].
Length = 490
Score = 446 bits (1148), Expect = e-125
Identities = 213/260 (81%), Positives = 235/260 (90%)
Frame = +3
Query: 249 WKQNSGKGRLPPGPTPLSILGNILQLDVKDISKSLSNLSKVYGPVFTVYFGLKPAVVLHG 428
WKQ+SGKG+LPPGPTPL ILGNILQLDVK+ISKSL+NLSKVYGPVFTVYFG+KP VVLHG
Sbjct: 20 WKQSSGKGKLPPGPTPLPILGNILQLDVKNISKSLTNLSKVYGPVFTVYFGMKPIVVLHG 79
Query: 429 YEAVKEALIDGGEEFSGRGHFPMAERVNKGHGIIFSSGKRWKETRRFSLMTLRNFGMGKR 608
YEAVKEALID GEEFSGRG FP+AER N +GI+FS+GK WKE RRFSLMTLRNFGMGKR
Sbjct: 80 YEAVKEALIDLGEEFSGRGMFPLAERANIVNGILFSNGKTWKEIRRFSLMTLRNFGMGKR 139
Query: 609 SIEERVQEEARCLVEELRKTNASPCDPTFLLGCAPCNVICSIIFHNRFDYTDPNFLTLLE 788
SIE+RVQEEA CLVEELRKTN PCDPTF+LGCAPCNVICSIIF NRFDY DP FL L+E
Sbjct: 140 SIEDRVQEEACCLVEELRKTNGLPCDPTFILGCAPCNVICSIIFQNRFDYKDPVFLDLME 199
Query: 789 KLNENFRILSSPWIQVCNNFPALIDYLPGSHNKVLKNSAYVKSYILEKVKEHQASLDVND 968
+LNE RILSSPW+QVCNNFPAL DYLPGSHNKVLKN A +KS++LEK EH+ASLD+N+
Sbjct: 200 RLNEILRILSSPWVQVCNNFPALFDYLPGSHNKVLKNVANLKSFVLEKAMEHKASLDINN 259
Query: 969 PRDFIDCFLIQMEQEKHNHQ 1028
PRD+IDCFLI+MEQEK N Q
Sbjct: 260 PRDYIDCFLIRMEQEKQNQQ 279
>ref|XP_581757.3| PREDICTED: cytochrome P450 family 2 subfamily C polypeptide 18-like
isoform 2 [Bos taurus].
Length = 490
Score = 446 bits (1148), Expect = e-125
Identities = 213/260 (81%), Positives = 235/260 (90%)
Frame = +3
Query: 249 WKQNSGKGRLPPGPTPLSILGNILQLDVKDISKSLSNLSKVYGPVFTVYFGLKPAVVLHG 428
WKQ+SGKG+LPPGPTPL ILGNILQLDVK+ISKSL+NLSKVYGPVFTVYFG+KP VVLHG
Sbjct: 20 WKQSSGKGKLPPGPTPLPILGNILQLDVKNISKSLTNLSKVYGPVFTVYFGMKPIVVLHG 79
Query: 429 YEAVKEALIDGGEEFSGRGHFPMAERVNKGHGIIFSSGKRWKETRRFSLMTLRNFGMGKR 608
YEAVKEALID GEEFSGRG FP+AER N +GI+FS+GK WKE RRFSLMTLRNFGMGKR
Sbjct: 80 YEAVKEALIDLGEEFSGRGMFPLAERANIVNGILFSNGKTWKEIRRFSLMTLRNFGMGKR 139
Query: 609 SIEERVQEEARCLVEELRKTNASPCDPTFLLGCAPCNVICSIIFHNRFDYTDPNFLTLLE 788
SIE+RVQEEA CLVEELRKTN PCDPTF+LGCAPCNVICSIIF NRFDY DP FL L+E
Sbjct: 140 SIEDRVQEEACCLVEELRKTNGLPCDPTFILGCAPCNVICSIIFQNRFDYKDPVFLDLME 199
Query: 789 KLNENFRILSSPWIQVCNNFPALIDYLPGSHNKVLKNSAYVKSYILEKVKEHQASLDVND 968
+LNE RILSSPW+QVCNNFPAL DYLPGSHNKVLKN A +KS++LEK EH+ASLD+N+
Sbjct: 200 RLNEILRILSSPWVQVCNNFPALFDYLPGSHNKVLKNVANLKSFVLEKAMEHKASLDINN 259
Query: 969 PRDFIDCFLIQMEQEKHNHQ 1028
PRD+IDCFLI+MEQEK N Q
Sbjct: 260 PRDYIDCFLIRMEQEKQNQQ 279
>ref|NP_001069895.1| cytochrome P450, family 2, subfamily C, polypeptide 87 [Bos taurus].
Length = 492
Score = 433 bits (1113), Expect = e-121
Identities = 207/268 (77%), Positives = 235/268 (87%), Gaps = 2/268 (0%)
Frame = +3
Query: 249 WKQNSGKGRLPPGPTPLSILGNILQLDVKDISKSLSNLSKVYGPVFTVYFGLKPAVVLHG 428
WKQ+SGKG+LPPGPTPL ILGNI QLDVK+ISKSL++LSKVYGPVFTVYFG+KP VVLHG
Sbjct: 20 WKQSSGKGKLPPGPTPLPILGNIFQLDVKNISKSLTSLSKVYGPVFTVYFGMKPTVVLHG 79
Query: 429 YEAVKEALIDGGEEFSGRGHFPMAERVNKGHGIIFSSGKRWKETRRFSLMTLRNFGMGKR 608
YEAVKEALID GEEFS RG FP+ ER KGHGI+FS+GK WKETRRFSLMTLRNFGMGKR
Sbjct: 80 YEAVKEALIDLGEEFSRRGSFPVIERNVKGHGIVFSNGKTWKETRRFSLMTLRNFGMGKR 139
Query: 609 SIEERVQEEARCLVEELRKTNASPCDPTFLLGCAPCNVICSIIFHNRFDYTDPNFLTLLE 788
SIE+RVQEEARCLVEELRKTN PCDPTF+LGCAPCNVICSIIF NRFDY D FL L++
Sbjct: 140 SIEDRVQEEARCLVEELRKTNGLPCDPTFILGCAPCNVICSIIFQNRFDYKDQTFLNLMK 199
Query: 789 KLNENFRILSSPWIQVCNNFPALIDYLPGSHN--KVLKNSAYVKSYILEKVKEHQASLDV 962
+NEN +IL SPWIQV N FP L+D+ P S++ K+ N+AYVK+Y+LEK +EHQASLD+
Sbjct: 200 TINENIKILGSPWIQVLNIFPVLLDFFPWSYSYKKLYTNTAYVKNYVLEKTREHQASLDI 259
Query: 963 NDPRDFIDCFLIQMEQEKHNHQGGHFTF 1046
N+PRDFIDCFLI+MEQEKHNHQ +TF
Sbjct: 260 NNPRDFIDCFLIKMEQEKHNHQ-SEYTF 286
>ref|XP_002698439.1| PREDICTED: cytochrome P450, family 2, subfamily C, polypeptide
87-like isoform 1 [Bos taurus].
Length = 490
Score = 425 bits (1092), Expect = e-119
Identities = 199/260 (76%), Positives = 230/260 (88%)
Frame = +3
Query: 249 WKQNSGKGRLPPGPTPLSILGNILQLDVKDISKSLSNLSKVYGPVFTVYFGLKPAVVLHG 428
WKQ+SGKG+LPPGPTPL ILGNILQLDVKDISKS+SNLSKVYGPVFT+YFG+ P VVLHG
Sbjct: 20 WKQSSGKGKLPPGPTPLPILGNILQLDVKDISKSVSNLSKVYGPVFTLYFGMNPLVVLHG 79
Query: 429 YEAVKEALIDGGEEFSGRGHFPMAERVNKGHGIIFSSGKRWKETRRFSLMTLRNFGMGKR 608
YEAVKEALI GEEFSGRG P+ +R +KG+G+IFS+GK WKETRRFSLMTLR+FGMGKR
Sbjct: 80 YEAVKEALIGLGEEFSGRGSCPVIQRASKGYGVIFSNGKIWKETRRFSLMTLRDFGMGKR 139
Query: 609 SIEERVQEEARCLVEELRKTNASPCDPTFLLGCAPCNVICSIIFHNRFDYTDPNFLTLLE 788
S+E+RVQ+EA CLVEELRKT+ PCDPTF+LGCAPCNVICSIIF N FDY D FL L+E
Sbjct: 140 SMEDRVQQEACCLVEELRKTDGLPCDPTFILGCAPCNVICSIIFQNHFDYKDQIFLDLME 199
Query: 789 KLNENFRILSSPWIQVCNNFPALIDYLPGSHNKVLKNSAYVKSYILEKVKEHQASLDVND 968
+LNEN RIL SPWIQ+C++FPALIDY+PG H K +N A +KSY+LEK +EHQASLD+N+
Sbjct: 200 RLNENARILGSPWIQLCSSFPALIDYVPGKHKKFFENYACMKSYVLEKTREHQASLDMNN 259
Query: 969 PRDFIDCFLIQMEQEKHNHQ 1028
PRDFIDCFL +MEQEKHN +
Sbjct: 260 PRDFIDCFLTKMEQEKHNQE 279
>ref|XP_612374.2| PREDICTED: cytochrome P450, family 2, subfamily C, polypeptide
87-like isoform 2 [Bos taurus].
Length = 490
Score = 425 bits (1092), Expect = e-119
Identities = 199/260 (76%), Positives = 230/260 (88%)
Frame = +3
Query: 249 WKQNSGKGRLPPGPTPLSILGNILQLDVKDISKSLSNLSKVYGPVFTVYFGLKPAVVLHG 428
WKQ+SGKG+LPPGPTPL ILGNILQLDVKDISKS+SNLSKVYGPVFT+YFG+ P VVLHG
Sbjct: 20 WKQSSGKGKLPPGPTPLPILGNILQLDVKDISKSVSNLSKVYGPVFTLYFGMNPLVVLHG 79
Query: 429 YEAVKEALIDGGEEFSGRGHFPMAERVNKGHGIIFSSGKRWKETRRFSLMTLRNFGMGKR 608
YEAVKEALI GEEFSGRG P+ +R +KG+G+IFS+GK WKETRRFSLMTLR+FGMGKR
Sbjct: 80 YEAVKEALIGLGEEFSGRGSCPVIQRASKGYGVIFSNGKIWKETRRFSLMTLRDFGMGKR 139
Query: 609 SIEERVQEEARCLVEELRKTNASPCDPTFLLGCAPCNVICSIIFHNRFDYTDPNFLTLLE 788
S+E+RVQ+EA CLVEELRKT+ PCDPTF+LGCAPCNVICSIIF N FDY D FL L+E
Sbjct: 140 SMEDRVQQEACCLVEELRKTDGLPCDPTFILGCAPCNVICSIIFQNHFDYKDQIFLDLME 199
Query: 789 KLNENFRILSSPWIQVCNNFPALIDYLPGSHNKVLKNSAYVKSYILEKVKEHQASLDVND 968
+LNEN RIL SPWIQ+C++FPALIDY+PG H K +N A +KSY+LEK +EHQASLD+N+
Sbjct: 200 RLNENARILGSPWIQLCSSFPALIDYVPGKHKKFFENYACMKSYVLEKTREHQASLDMNN 259
Query: 969 PRDFIDCFLIQMEQEKHNHQ 1028
PRDFIDCFL +MEQEKHN +
Sbjct: 260 PRDFIDCFLTKMEQEKHNQE 279
>ref|XP_002698440.1| PREDICTED: cytochrome P450, family 2, subfamily C, polypeptide
87-like isoform 2 [Bos taurus].
Length = 490
Score = 423 bits (1088), Expect = e-118
Identities = 198/260 (76%), Positives = 230/260 (88%)
Frame = +3
Query: 249 WKQNSGKGRLPPGPTPLSILGNILQLDVKDISKSLSNLSKVYGPVFTVYFGLKPAVVLHG 428
WKQ+SGKG+LPPGPTPL ILGNILQLDVKDISKS+SNLSKVYGPVFT+YFG+ P VVLHG
Sbjct: 20 WKQSSGKGKLPPGPTPLPILGNILQLDVKDISKSVSNLSKVYGPVFTLYFGMNPLVVLHG 79
Query: 429 YEAVKEALIDGGEEFSGRGHFPMAERVNKGHGIIFSSGKRWKETRRFSLMTLRNFGMGKR 608
YEAVKEALI GEEFSGRG P+ +R +KG+G+IFS+GK WKETRRFSLMTLR+FGMGKR
Sbjct: 80 YEAVKEALIGLGEEFSGRGSCPVIQRASKGYGVIFSNGKIWKETRRFSLMTLRDFGMGKR 139
Query: 609 SIEERVQEEARCLVEELRKTNASPCDPTFLLGCAPCNVICSIIFHNRFDYTDPNFLTLLE 788
S+E+RVQ+EA CLVEELRKT+ PCDPTF+LGCAPCNVICSIIF N FDY D FL L+E
Sbjct: 140 SMEDRVQQEACCLVEELRKTDGLPCDPTFILGCAPCNVICSIIFQNHFDYKDQIFLDLME 199
Query: 789 KLNENFRILSSPWIQVCNNFPALIDYLPGSHNKVLKNSAYVKSYILEKVKEHQASLDVND 968
+LNEN RIL SPWIQ+C++FPALIDY+PG H K +N A +KSY+LEK +EHQASLD+N+
Sbjct: 200 RLNENARILGSPWIQLCSSFPALIDYVPGKHKKFFENYACMKSYVLEKTREHQASLDMNN 259
Query: 969 PRDFIDCFLIQMEQEKHNHQ 1028
PRDFIDCFL +ME+EKHN +
Sbjct: 260 PRDFIDCFLTKMEKEKHNQE 279
>ref|NP_001103262.1| cytochrome P450, family 2, subfamily C, polypeptide 19 [Bos taurus].
Length = 490
Score = 374 bits (960), Expect = e-104
Identities = 167/258 (64%), Positives = 213/258 (82%)
Frame = +3
Query: 249 WKQNSGKGRLPPGPTPLSILGNILQLDVKDISKSLSNLSKVYGPVFTVYFGLKPAVVLHG 428
W Q KG+LPPGPTPL I+GNILQ+++K++SKS+S L++ YGPVFT+YFG+KP VVLHG
Sbjct: 20 WNQRHAKGKLPPGPTPLPIVGNILQINIKNVSKSISKLAEDYGPVFTLYFGMKPTVVLHG 79
Query: 429 YEAVKEALIDGGEEFSGRGHFPMAERVNKGHGIIFSSGKRWKETRRFSLMTLRNFGMGKR 608
YEAVK+ LID EEFSGRG P+A+ +N+G GI+FS+G+ WK+TRRFSLM LRN GMGKR
Sbjct: 80 YEAVKQVLIDQSEEFSGRGSLPVADNINQGLGIVFSNGEIWKQTRRFSLMVLRNMGMGKR 139
Query: 609 SIEERVQEEARCLVEELRKTNASPCDPTFLLGCAPCNVICSIIFHNRFDYTDPNFLTLLE 788
+IE R+QEEA CLVE L+KTN SPCDPT LL CAPCNVICSIIF NRF+Y D LTL++
Sbjct: 140 TIEHRIQEEALCLVEALKKTNGSPCDPTLLLSCAPCNVICSIIFRNRFEYNDERLLTLIK 199
Query: 789 KLNENFRILSSPWIQVCNNFPALIDYLPGSHNKVLKNSAYVKSYILEKVKEHQASLDVND 968
NEN R++S+PW+++ N FP+L+ Y PGSHN + KN + +ILE++K+HQ SLD+N+
Sbjct: 200 YFNENSRLVSTPWVELYNTFPSLLHYFPGSHNTIFKNMTEQRKFILEEIKKHQESLDLNN 259
Query: 969 PRDFIDCFLIQMEQEKHN 1022
P+DFID FLI+ME+EKHN
Sbjct: 260 PQDFIDYFLIKMEKEKHN 277
>ref|XP_002698445.1| PREDICTED: cytochrome P450, family 2, subfamily C, polypeptide
19-like isoform 2 [Bos taurus].
Length = 490
Score = 372 bits (956), Expect = e-103
Identities = 172/260 (66%), Positives = 214/260 (82%)
Frame = +3
Query: 249 WKQNSGKGRLPPGPTPLSILGNILQLDVKDISKSLSNLSKVYGPVFTVYFGLKPAVVLHG 428
W Q KG LPPGPTPL I+GNILQ+++K++SKS+S L++ YGPVFT+YFG+KP VVLHG
Sbjct: 20 WNQRHAKGTLPPGPTPLPIVGNILQINIKNVSKSISKLAEDYGPVFTLYFGMKPTVVLHG 79
Query: 429 YEAVKEALIDGGEEFSGRGHFPMAERVNKGHGIIFSSGKRWKETRRFSLMTLRNFGMGKR 608
YEAVK+ LID EEFSGRG P+A+ +N+G GIIFS+G+ WK+TRRFSLM LRN GMGKR
Sbjct: 80 YEAVKQVLIDQSEEFSGRGSLPVADNINQGLGIIFSNGEIWKQTRRFSLMVLRNMGMGKR 139
Query: 609 SIEERVQEEARCLVEELRKTNASPCDPTFLLGCAPCNVICSIIFHNRFDYTDPNFLTLLE 788
+IE R+QEEA CLVE L+KTN PCDPTFLL APCNVICSIIF NRF+Y+D +FLTL +
Sbjct: 140 TIEHRIQEEALCLVEALKKTNGCPCDPTFLLTYAPCNVICSIIFRNRFEYSDESFLTLAK 199
Query: 789 KLNENFRILSSPWIQVCNNFPALIDYLPGSHNKVLKNSAYVKSYILEKVKEHQASLDVND 968
++EN I S+PWI++ N FP+L+ YLPGSHN + KN + +ILEK+KEHQ SLD+N+
Sbjct: 200 YIHENATIFSTPWIELYNAFPSLLHYLPGSHNTLFKNMTEQRKFILEKIKEHQESLDLNN 259
Query: 969 PRDFIDCFLIQMEQEKHNHQ 1028
P+DFID FLI+ME+EKHN Q
Sbjct: 260 PQDFIDYFLIKMEKEKHNKQ 279
>ref|XP_001252335.1| PREDICTED: cytochrome P450, family 2, subfamily C, polypeptide
19-like isoform 1 [Bos taurus].
Length = 490
Score = 372 bits (956), Expect = e-103
Identities = 172/260 (66%), Positives = 214/260 (82%)
Frame = +3
Query: 249 WKQNSGKGRLPPGPTPLSILGNILQLDVKDISKSLSNLSKVYGPVFTVYFGLKPAVVLHG 428
W Q KG LPPGPTPL I+GNILQ+++K++SKS+S L++ YGPVFT+YFG+KP VVLHG
Sbjct: 20 WNQRHAKGTLPPGPTPLPIVGNILQINIKNVSKSISKLAEDYGPVFTLYFGMKPTVVLHG 79
Query: 429 YEAVKEALIDGGEEFSGRGHFPMAERVNKGHGIIFSSGKRWKETRRFSLMTLRNFGMGKR 608
YEAVK+ LID EEFSGRG P+A+ +N+G GIIFS+G+ WK+TRRFSLM LRN GMGKR
Sbjct: 80 YEAVKQVLIDQSEEFSGRGSLPVADNINQGLGIIFSNGEIWKQTRRFSLMVLRNMGMGKR 139
Query: 609 SIEERVQEEARCLVEELRKTNASPCDPTFLLGCAPCNVICSIIFHNRFDYTDPNFLTLLE 788
+IE R+QEEA CLVE L+KTN PCDPTFLL APCNVICSIIF NRF+Y+D +FLTL +
Sbjct: 140 TIEHRIQEEALCLVEALKKTNGCPCDPTFLLTYAPCNVICSIIFRNRFEYSDESFLTLAK 199
Query: 789 KLNENFRILSSPWIQVCNNFPALIDYLPGSHNKVLKNSAYVKSYILEKVKEHQASLDVND 968
++EN I S+PWI++ N FP+L+ YLPGSHN + KN + +ILEK+KEHQ SLD+N+
Sbjct: 200 YIHENATIFSTPWIELYNAFPSLLHYLPGSHNTLFKNMTEQRKFILEKIKEHQESLDLNN 259
Query: 969 PRDFIDCFLIQMEQEKHNHQ 1028
P+DFID FLI+ME+EKHN Q
Sbjct: 260 PQDFIDYFLIKMEKEKHNKQ 279
Database: RefSeq49_BP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 17,681,374
Number of sequences in database: 33,088
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33088
Number of Hits to DB: 39,603,767
Number of extensions: 1041819
Number of successful extensions: 3359
Number of sequences better than 1.0e-05: 52
Number of HSP's gapped: 3337
Number of HSP's successfully gapped: 53
Length of query: 360
Length of database: 17,681,374
Length adjustment: 103
Effective length of query: 257
Effective length of database: 14,273,310
Effective search space: 3668240670
Effective search space used: 3668240670
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)
Search to RefSeqSP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-013971
(1082 letters)
Database: RefSeq49_SP.fasta
24,897 sequences; 11,343,932 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_999585.1| cytochrome P450 2C49 [Sus scrofa]. 536 e-153
Alignment gi|XP_003359352.1| PREDICTED: LOW QUALITY PROTEIN: cytochrome P... 517 e-147
Alignment gi|NP_001161307.1| cytochrome P450 2C42 [Sus scrofa]. 457 e-129
Alignment gi|NP_999579.1| cytochrome P450 2C33 [Sus scrofa]. 352 3e-97
Alignment gi|NP_999586.1| cytochrome P450 2E1 [Sus scrofa]. 296 1e-80
Alignment gi|XP_003127188.2| PREDICTED: cytochrome P450 2G1-like isoform ... 280 1e-75
Alignment gi|NP_999578.1| cytochrome P450 2B22 [Sus scrofa]. 270 1e-72
Alignment gi|XP_003362003.1| PREDICTED: cytochrome P450 2C18, partial [Su... 269 2e-72
Alignment gi|NP_999582.1| cytochrome P450 2A19 [Sus scrofa]. 245 4e-65
Alignment gi|XP_003133201.2| PREDICTED: cytochrome P450 2C26-like [Sus sc... 209 2e-54
>ref|NP_999585.1| cytochrome P450 2C49 [Sus scrofa].
Length = 490
Score = 536 bits (1382), Expect = e-153
Identities = 264/285 (92%), Positives = 266/285 (93%)
Frame = +3
Query: 192 MDGAXXXXXXXXXXXXXXXWKQNSGKGRLPPGPTPLSILGNILQLDVKDISKSLSNLSKV 371
MDGA WKQNSGKGRLPPGPTPLSILGNILQLDVKDISKSLSNLSKV
Sbjct: 1 MDGAVVLVLCLSCLLLLSLWKQNSGKGRLPPGPTPLSILGNILQLDVKDISKSLSNLSKV 60
Query: 372 YGPVFTVYFGLKPAVVLHGYEAVKEALIDGGEEFSGRGHFPMAERVNKGHGIIFSSGKRW 551
YGPVFTVYFGLKPAVVLHGYEAVKEALIDGGEEFSGRGHFPMAERVNKGHGIIFSSGKRW
Sbjct: 61 YGPVFTVYFGLKPAVVLHGYEAVKEALIDGGEEFSGRGHFPMAERVNKGHGIIFSSGKRW 120
Query: 552 KETRRFSLMTLRNFGMGKRSIEERVQEEARCLVEELRKTNASPCDPTFLLGCAPCNVICS 731
KETRRFSLMTLRNFGMGKRSIEERVQEEARCLVEELRKTNASPCDPTFLLGCAPCNVICS
Sbjct: 121 KETRRFSLMTLRNFGMGKRSIEERVQEEARCLVEELRKTNASPCDPTFLLGCAPCNVICS 180
Query: 732 IIFHNRFDYTDPNFLTLLEKLNENFRILSSPWIQVCNNFPALIDYLPGSHNKVLKNSAYV 911
IIFHNRFDYTDPNFLTLLEKLNENFRILSSPW+QVCNNFPALIDYLPGSHNKVLKNSAYV
Sbjct: 181 IIFHNRFDYTDPNFLTLLEKLNENFRILSSPWMQVCNNFPALIDYLPGSHNKVLKNSAYV 240
Query: 912 KSYILEKVKEHQASLDVNDPRDFIDCFLIQMEQEKHNHQGGHFTF 1046
KSYILEKVKEHQASLDV DPRDFIDCFLI+MEQEKHNHQ FTF
Sbjct: 241 KSYILEKVKEHQASLDVKDPRDFIDCFLIKMEQEKHNHQVA-FTF 284
>ref|XP_003359352.1| PREDICTED: LOW QUALITY PROTEIN: cytochrome P450 2C18 [Sus scrofa].
Length = 490
Score = 517 bits (1331), Expect = e-147
Identities = 256/285 (89%), Positives = 259/285 (90%)
Frame = +3
Query: 192 MDGAXXXXXXXXXXXXXXXWKQNSGKGRLPPGPTPLSILGNILQLDVKDISKSLSNLSKV 371
MDGA WKQNSGKGRLPPGPTPL ILGNILQL+VKDISKSLSNLSKV
Sbjct: 1 MDGAVVLVLCLSCLLLLSLWKQNSGKGRLPPGPTPLPILGNILQLNVKDISKSLSNLSKV 60
Query: 372 YGPVFTVYFGLKPAVVLHGYEAVKEALIDGGEEFSGRGHFPMAERVNKGHGIIFSSGKRW 551
YGPVFTVY GLKPAVVLHGYEA+KEALIDGGEEFSGRGH PMAERVNKGHGIIFSSGKRW
Sbjct: 61 YGPVFTVYLGLKPAVVLHGYEAMKEALIDGGEEFSGRGHLPMAERVNKGHGIIFSSGKRW 120
Query: 552 KETRRFSLMTLRNFGMGKRSIEERVQEEARCLVEELRKTNASPCDPTFLLGCAPCNVICS 731
KE RRFSLMTLRNFGMGKRSIEERVQEEARCLVEELRKTNASP DPTFLLGCAPC VICS
Sbjct: 121 KEIRRFSLMTLRNFGMGKRSIEERVQEEARCLVEELRKTNASPWDPTFLLGCAPCKVICS 180
Query: 732 IIFHNRFDYTDPNFLTLLEKLNENFRILSSPWIQVCNNFPALIDYLPGSHNKVLKNSAYV 911
IIF NRFDYTDPNFLTLLEKLNENFRILSSPWIQVCNNFPALIDYLPGSHNKV KNSAYV
Sbjct: 181 IIFRNRFDYTDPNFLTLLEKLNENFRILSSPWIQVCNNFPALIDYLPGSHNKVFKNSAYV 240
Query: 912 KSYILEKVKEHQASLDVNDPRDFIDCFLIQMEQEKHNHQGGHFTF 1046
KSYILEKVKEHQASLDVNDPRDFIDCFLI+MEQEKHNHQ FTF
Sbjct: 241 KSYILEKVKEHQASLDVNDPRDFIDCFLIKMEQEKHNHQVA-FTF 284
>ref|NP_001161307.1| cytochrome P450 2C42 [Sus scrofa].
Length = 490
Score = 457 bits (1175), Expect = e-129
Identities = 215/260 (82%), Positives = 240/260 (92%)
Frame = +3
Query: 249 WKQNSGKGRLPPGPTPLSILGNILQLDVKDISKSLSNLSKVYGPVFTVYFGLKPAVVLHG 428
WK++SGKG LPPGPTPL ILGNILQLDVK+ISKSLSNL++VYGPVFTVYFG+KP VVL+G
Sbjct: 20 WKESSGKGELPPGPTPLPILGNILQLDVKNISKSLSNLAEVYGPVFTVYFGIKPTVVLYG 79
Query: 429 YEAVKEALIDGGEEFSGRGHFPMAERVNKGHGIIFSSGKRWKETRRFSLMTLRNFGMGKR 608
YEAVKEAL+D GEEFSGRGHFP+AE+ +KG GIIFS+GK+WKE RRFSLMTLRN GMGKR
Sbjct: 80 YEAVKEALVDLGEEFSGRGHFPVAEKTHKGLGIIFSNGKKWKEIRRFSLMTLRNLGMGKR 139
Query: 609 SIEERVQEEARCLVEELRKTNASPCDPTFLLGCAPCNVICSIIFHNRFDYTDPNFLTLLE 788
SIE+R+QEEA CLVEELRKTNASPCDPTF+L CAPCNVICSIIF NRFDYTD +FLTLLE
Sbjct: 140 SIEDRIQEEACCLVEELRKTNASPCDPTFILDCAPCNVICSIIFQNRFDYTDQDFLTLLE 199
Query: 789 KLNENFRILSSPWIQVCNNFPALIDYLPGSHNKVLKNSAYVKSYILEKVKEHQASLDVND 968
K +EN ILSSPWIQVCNNFPALIDY PG HNK+LKN AY+KSY+L+KVKEHQ SLD+N+
Sbjct: 200 KFHENLNILSSPWIQVCNNFPALIDYSPGIHNKLLKNIAYLKSYVLKKVKEHQESLDINN 259
Query: 969 PRDFIDCFLIQMEQEKHNHQ 1028
PRDFIDCFLI+MEQEKHN Q
Sbjct: 260 PRDFIDCFLIKMEQEKHNQQ 279
>ref|NP_999579.1| cytochrome P450 2C33 [Sus scrofa].
Length = 494
Score = 352 bits (902), Expect = 3e-97
Identities = 167/258 (64%), Positives = 207/258 (80%)
Frame = +3
Query: 249 WKQNSGKGRLPPGPTPLSILGNILQLDVKDISKSLSNLSKVYGPVFTVYFGLKPAVVLHG 428
WK+N + RLPPGPTPL I+GN++QL++KDI SLS L+K YGPV TVYFG +PAVVLHG
Sbjct: 24 WKKNHKRRRLPPGPTPLPIIGNLMQLNLKDIPASLSKLAKQYGPVCTVYFGSQPAVVLHG 83
Query: 429 YEAVKEALIDGGEEFSGRGHFPMAERVNKGHGIIFSSGKRWKETRRFSLMTLRNFGMGKR 608
YEAVKEALID G+EF GRG P+ + G+G++FS+G+RWK+ RRFSLMTLRNFGMGKR
Sbjct: 84 YEAVKEALIDQGDEFLGRGIIPIIDDTQGGYGLVFSNGERWKQIRRFSLMTLRNFGMGKR 143
Query: 609 SIEERVQEEARCLVEELRKTNASPCDPTFLLGCAPCNVICSIIFHNRFDYTDPNFLTLLE 788
S+EERVQEEA+ LVEELRKT A P DPTF+L CAPCNVICSI+F++RF Y + FL+L+
Sbjct: 144 SLEERVQEEAQFLVEELRKTEAQPFDPTFILSCAPCNVICSILFNDRFHYDNETFLSLMN 203
Query: 789 KLNENFRILSSPWIQVCNNFPALIDYLPGSHNKVLKNSAYVKSYILEKVKEHQASLDVND 968
LN NFR +SSPWIQ+ N +P +I +LPG H K +S+ILEKVKEHQ S ++N+
Sbjct: 204 LLNANFRQISSPWIQIYNLWPQIIKHLPGEHRAFSKRLKDCRSFILEKVKEHQKSPNLNN 263
Query: 969 PRDFIDCFLIQMEQEKHN 1022
P+D+IDCFL +MEQEK N
Sbjct: 264 PQDYIDCFLSKMEQEKQN 281
>ref|NP_999586.1| cytochrome P450 2E1 [Sus scrofa].
Length = 495
Score = 296 bits (758), Expect = 1e-80
Identities = 142/258 (55%), Positives = 186/258 (72%)
Frame = +3
Query: 249 WKQNSGKGRLPPGPTPLSILGNILQLDVKDISKSLSNLSKVYGPVFTVYFGLKPAVVLHG 428
WK +LPPGP PL I+GNI QLD+K+I KS + L++ YGPVFTVY G + VVLHG
Sbjct: 23 WKHIHSSWKLPPGPFPLPIVGNIFQLDLKNIPKSFTMLAERYGPVFTVYLGSRRIVVLHG 82
Query: 429 YEAVKEALIDGGEEFSGRGHFPMAERVNKGHGIIFSSGKRWKETRRFSLMTLRNFGMGKR 608
Y+AVKE L+ EFSGRG P + V+K G+IF++G W++TRRFSL TLR+FGMGK+
Sbjct: 83 YKAVKEVLLHYKNEFSGRGEIPTFQ-VHKDKGVIFNNGPTWRDTRRFSLTTLRDFGMGKQ 141
Query: 609 SIEERVQEEARCLVEELRKTNASPCDPTFLLGCAPCNVICSIIFHNRFDYTDPNFLTLLE 788
E+R+Q EA L+E LRKT+ P DPTFL+GCAPCNVI I+F FDY D L L+
Sbjct: 142 GNEQRIQREAHFLLEALRKTHGQPFDPTFLIGCAPCNVISDILFRQHFDYNDKTCLRLMS 201
Query: 789 KLNENFRILSSPWIQVCNNFPALIDYLPGSHNKVLKNSAYVKSYILEKVKEHQASLDVND 968
NENF +LS+ WIQ+ NNF + YLPGSH K++KN + +K Y LE+VK+H+ SL+ +
Sbjct: 202 MFNENFYLLSTGWIQLYNNFSGYLRYLPGSHRKLMKNISEIKDYALERVKDHRDSLEPSC 261
Query: 969 PRDFIDCFLIQMEQEKHN 1022
PRDF D L++ME+EK++
Sbjct: 262 PRDFTDTLLMEMEKEKYS 279
>ref|XP_003127188.2| PREDICTED: cytochrome P450 2G1-like isoform 1 [Sus scrofa].
Length = 549
Score = 280 bits (716), Expect = 1e-75
Identities = 136/258 (52%), Positives = 181/258 (70%)
Frame = +3
Query: 249 WKQNSGKGRLPPGPTPLSILGNILQLDVKDISKSLSNLSKVYGPVFTVYFGLKPAVVLHG 428
WK+ S G+LPPGPTP+ LGN+LQ+ +S L + YGPVFTVY G +P VVL G
Sbjct: 24 WKRISKGGKLPPGPTPIPFLGNLLQVRTDATFQSFMKLREKYGPVFTVYMGPRPVVVLCG 83
Query: 429 YEAVKEALIDGGEEFSGRGHFPMAERVNKGHGIIFSSGKRWKETRRFSLMTLRNFGMGKR 608
+EAVKEALID +EFSGRG ER +GHG+ ++G RW+ RRFSL LR+FGMGKR
Sbjct: 84 HEAVKEALIDRADEFSGRGELASVERNFQGHGVALANGDRWRILRRFSLTILRDFGMGKR 143
Query: 609 SIEERVQEEARCLVEELRKTNASPCDPTFLLGCAPCNVICSIIFHNRFDYTDPNFLTLLE 788
SIEER+QEEA L++ELRKT +P +PTF L NVI S++F +RFDY D FL LL+
Sbjct: 144 SIEERIQEEAGFLLQELRKTKGAPIEPTFFLSRTVSNVISSVVFGSRFDYEDKQFLKLLQ 203
Query: 789 KLNENFRILSSPWIQVCNNFPALIDYLPGSHNKVLKNSAYVKSYILEKVKEHQASLDVND 968
+N++F +S+PW Q+ + + ++ YLPG HN++ +K +I +VK ++ASLD +
Sbjct: 204 MINQSFIEMSTPWAQLYDMYSGIMQYLPGRHNRIYYLIEELKDFIASRVKINEASLDPQN 263
Query: 969 PRDFIDCFLIQMEQEKHN 1022
PRDFIDCFLI+M Q+K N
Sbjct: 264 PRDFIDCFLIKMHQDKDN 281
>ref|NP_999578.1| cytochrome P450 2B22 [Sus scrofa].
Length = 493
Score = 270 bits (690), Expect = 1e-72
Identities = 130/258 (50%), Positives = 179/258 (69%)
Frame = +3
Query: 249 WKQNSGKGRLPPGPTPLSILGNILQLDVKDISKSLSNLSKVYGPVFTVYFGLKPAVVLHG 428
W S +G LPPGP PL LGNILQ+D K KS L + YG VFTVY G +P V++ G
Sbjct: 20 WGHPSSQGHLPPGPRPLPFLGNILQMDRKGFLKSFQALRERYGDVFTVYLGPRPVVMICG 79
Query: 429 YEAVKEALIDGGEEFSGRGHFPMAERVNKGHGIIFSSGKRWKETRRFSLMTLRNFGMGKR 608
EA++EAL+D E FSGRG + E + +G+G+IFS+G+RWK RRFSL T+R+FG+GKR
Sbjct: 80 TEAIREALVDQAEAFSGRGKIAVVEPIFQGYGVIFSNGERWKTLRRFSLATMRDFGLGKR 139
Query: 609 SIEERVQEEARCLVEELRKTNASPCDPTFLLGCAPCNVICSIIFHNRFDYTDPNFLTLLE 788
S+EER+QEEA+CLVEELRK+ + DPT+ + N+ICSI+F RF Y DP FL LL+
Sbjct: 140 SVEERIQEEAQCLVEELRKSQGALQDPTYYFHSSTANIICSIVFGKRFAYRDPEFLQLLD 199
Query: 789 KLNENFRILSSPWIQVCNNFPALIDYLPGSHNKVLKNSAYVKSYILEKVKEHQASLDVND 968
L + F ++SS Q+ + A + Y PGSH ++ KN V ++I V++H+ +LD +D
Sbjct: 200 LLFQTFLLISSFPSQLFELYSAFLKYFPGSHRQIYKNLQQVNAFIGRSVEKHRETLDPSD 259
Query: 969 PRDFIDCFLIQMEQEKHN 1022
PRD ID +L++M++EK N
Sbjct: 260 PRDLIDSYLLRMDKEKSN 277
>ref|XP_003362003.1| PREDICTED: cytochrome P450 2C18, partial [Sus scrofa].
Length = 161
Score = 269 bits (688), Expect = 2e-72
Identities = 140/208 (67%), Positives = 146/208 (70%)
Frame = +3
Query: 354 SNLSKVYGPVFTVYFGLKPAVVLHGYEAVKEALIDGGEEFSGRGHFPMAERVNKGHGIIF 533
S LSKVYGPV+TVY GL+PAVVLHGYE +KEALI
Sbjct: 1 SQLSKVYGPVYTVYLGLEPAVVLHGYEVMKEALI-------------------------- 34
Query: 534 SSGKRWKETRRFSLMTLRNFGMGKRSIEERVQEEARCLVEELRKTNASPCDPTFLLGCAP 713
GKRSIEE +QEEARCLVEELRK+ ASPCDPTFLL CAP
Sbjct: 35 ---------------------AGKRSIEEHIQEEARCLVEELRKSLASPCDPTFLLSCAP 73
Query: 714 CNVICSIIFHNRFDYTDPNFLTLLEKLNENFRILSSPWIQVCNNFPALIDYLPGSHNKVL 893
CNVICSIIF NRFDYTDPNFLT L K NENFRIL+S WIQ CNNFPALIDYLPGSHNKV
Sbjct: 74 CNVICSIIFRNRFDYTDPNFLTFLGKFNENFRILNSLWIQACNNFPALIDYLPGSHNKVF 133
Query: 894 KNSAYVKSYILEKVKEHQASLDVNDPRD 977
KN AYVKSYILEKVKEHQASLDVNDPRD
Sbjct: 134 KNFAYVKSYILEKVKEHQASLDVNDPRD 161
>ref|NP_999582.1| cytochrome P450 2A19 [Sus scrofa].
Length = 494
Score = 245 bits (625), Expect = 4e-65
Identities = 124/258 (48%), Positives = 174/258 (67%)
Frame = +3
Query: 249 WKQNSGKGRLPPGPTPLSILGNILQLDVKDISKSLSNLSKVYGPVFTVYFGLKPAVVLHG 428
W+Q +G+LPPGPTPL +GN LQL+ + + SL +S+ YGPVFTV+ G + VVL G
Sbjct: 24 WRQRKLQGKLPPGPTPLPFIGNYLQLNTEQMYNSLMKISQRYGPVFTVHLGPRRIVVLCG 83
Query: 429 YEAVKEALIDGGEEFSGRGHFPMAERVNKGHGIIFSSGKRWKETRRFSLMTLRNFGMGKR 608
Y+AVKEAL+D EEFSGRG + + KG+G+ FS+G+R K+ RRFS+ TLR+FG+GKR
Sbjct: 84 YDAVKEALVDQAEEFSGRGEQATFDWLFKGYGVAFSNGERAKQLRRFSITTLRDFGVGKR 143
Query: 609 SIEERVQEEARCLVEELRKTNASPCDPTFLLGCAPCNVICSIIFHNRFDYTDPNFLTLLE 788
IEER+QEEA L+E R T + DPT+ L NVI SI+F +RFDY D FL LL
Sbjct: 144 GIEERIQEEAGHLIEAFRGTRGAFIDPTYFLSRTVSNVISSIVFGDRFDYEDKEFLALLR 203
Query: 789 KLNENFRILSSPWIQVCNNFPALIDYLPGSHNKVLKNSAYVKSYILEKVKEHQASLDVND 968
+ +F+ ++ Q+ F +++ +LPG + K+ ++ +I KV+ +Q +LD N
Sbjct: 204 MMLGSFQFTATSTGQLYEMFYSVMKHLPGPQQQAFKDLQGLEDFIARKVEHNQRTLDPNS 263
Query: 969 PRDFIDCFLIQMEQEKHN 1022
PRDFID FLI+M++EK N
Sbjct: 264 PRDFIDSFLIRMQEEKKN 281
>ref|XP_003133201.2| PREDICTED: cytochrome P450 2C26-like [Sus scrofa].
Length = 358
Score = 209 bits (532), Expect = 2e-54
Identities = 104/141 (73%), Positives = 118/141 (83%)
Frame = +3
Query: 249 WKQNSGKGRLPPGPTPLSILGNILQLDVKDISKSLSNLSKVYGPVFTVYFGLKPAVVLHG 428
W Q+SGKG+LPPGPT L ILGNILQL VK ISK LSNLSK+YGPV+T+YFG+KP VV G
Sbjct: 20 WNQSSGKGKLPPGPTSLPILGNILQLYVKAISKYLSNLSKIYGPVYTLYFGMKPVVVFCG 79
Query: 429 YEAVKEALIDGGEEFSGRGHFPMAERVNKGHGIIFSSGKRWKETRRFSLMTLRNFGMGKR 608
YEAVKEALI GEEFSGR +PM E+ +G GI+FS+GKRWK+ RFSLM L N GMGKR
Sbjct: 80 YEAVKEALIHLGEEFSGRSSYPMNEKSRRGLGIMFSNGKRWKQIWRFSLMMLWNLGMGKR 139
Query: 609 SIEERVQEEARCLVEELRKTN 671
SIE+RVQEEA CLVEELR+TN
Sbjct: 140 SIEDRVQEEALCLVEELRRTN 160
Database: RefSeq49_SP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 11,343,932
Number of sequences in database: 24,897
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 24897
Number of Hits to DB: 25,520,338
Number of extensions: 672347
Number of successful extensions: 2195
Number of sequences better than 1.0e-05: 27
Number of HSP's gapped: 2173
Number of HSP's successfully gapped: 29
Length of query: 360
Length of database: 11,343,932
Length adjustment: 100
Effective length of query: 260
Effective length of database: 8,854,232
Effective search space: 2302100320
Effective search space used: 2302100320
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)
Search to RefSeqMP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-013971
(1082 letters)
Database: RefSeq49_MP.fasta
30,036 sequences; 15,617,559 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001011707.1| cytochrome P450, family 2, subfamily c, poly... 414 e-116
Alignment gi|NP_082467.2| cytochrome P450, family 2, subfamily c, polypep... 412 e-115
Alignment gi|NP_031841.3| cytochrome P450 2C29 [Mus musculus]. 409 e-114
Alignment gi|NP_082365.1| cytochrome P450 2C55 [Mus musculus]. 404 e-113
Alignment gi|NP_034133.2| cytochrome P450 2C39 [Mus musculus]. 403 e-112
Alignment gi|NP_034132.2| cytochrome P450 2C38 [Mus musculus]. 402 e-112
Alignment gi|NP_598905.2| cytochrome P450 2C50 isoform 1 [Mus musculus]. 393 e-109
Alignment gi|NP_034131.2| cytochrome P450 2C37 [Mus musculus]. 392 e-109
Alignment gi|NP_996260.1| cytochrome P450 2C54 [Mus musculus]. 388 e-108
Alignment gi|NP_001161377.1| cytochrome P450, family 2, subfamily c, poly... 352 4e-97
>ref|NP_001011707.1| cytochrome P450, family 2, subfamily c, polypeptide 66 [Mus
musculus].
Length = 490
Score = 414 bits (1065), Expect = e-116
Identities = 194/258 (75%), Positives = 221/258 (85%)
Frame = +3
Query: 249 WKQNSGKGRLPPGPTPLSILGNILQLDVKDISKSLSNLSKVYGPVFTVYFGLKPAVVLHG 428
WKQNS + LPPGPTPL I+GNILQLD+KDISKSL N SKVYGPVFT+Y G KPAVVLHG
Sbjct: 20 WKQNSQRRNLPPGPTPLPIIGNILQLDLKDISKSLRNFSKVYGPVFTLYLGKKPAVVLHG 79
Query: 429 YEAVKEALIDGGEEFSGRGHFPMAERVNKGHGIIFSSGKRWKETRRFSLMTLRNFGMGKR 608
Y+AVKEALID GEEF+GRG FP+A++ + G++FSSG+ WKE RRFSLMTLRNFGMGKR
Sbjct: 80 YKAVKEALIDHGEEFAGRGTFPVADKFIRRCGVVFSSGRTWKEMRRFSLMTLRNFGMGKR 139
Query: 609 SIEERVQEEARCLVEELRKTNASPCDPTFLLGCAPCNVICSIIFHNRFDYTDPNFLTLLE 788
SIE+RVQEEARCLV+ELRKT PCDPTF+LGCAPCNVICSI+F NRFDY D FLT ++
Sbjct: 140 SIEDRVQEEARCLVDELRKTKGVPCDPTFILGCAPCNVICSIVFQNRFDYKDQEFLTFID 199
Query: 789 KLNENFRILSSPWIQVCNNFPALIDYLPGSHNKVLKNSAYVKSYILEKVKEHQASLDVND 968
LNEN ILSSPWIQVCNNFPA+IDYLPG H K+LKN + K Y L KV +H+ SLD+N+
Sbjct: 200 ILNENVEILSSPWIQVCNNFPAIIDYLPGRHRKLLKNFDFAKHYFLAKVIQHKESLDINN 259
Query: 969 PRDFIDCFLIQMEQEKHN 1022
PRDFIDCFLI+MEQEKHN
Sbjct: 260 PRDFIDCFLIKMEQEKHN 277
>ref|NP_082467.2| cytochrome P450, family 2, subfamily c, polypeptide 65 [Mus
musculus].
Length = 490
Score = 412 bits (1059), Expect = e-115
Identities = 190/258 (73%), Positives = 218/258 (84%)
Frame = +3
Query: 249 WKQNSGKGRLPPGPTPLSILGNILQLDVKDISKSLSNLSKVYGPVFTVYFGLKPAVVLHG 428
W+QNS + LPPGPTPL I+GNILQLD+KDISKSL N SKVYGPVFT+Y G PAVVLHG
Sbjct: 20 WRQNSQRRNLPPGPTPLPIIGNILQLDLKDISKSLRNFSKVYGPVFTLYLGRNPAVVLHG 79
Query: 429 YEAVKEALIDGGEEFSGRGHFPMAERVNKGHGIIFSSGKRWKETRRFSLMTLRNFGMGKR 608
YEAVKEA D GEEF+GRG FP+ ++ K G++FSSG+ WKE RRFSLMTLRNFGMG+R
Sbjct: 80 YEAVKEAFTDHGEEFAGRGVFPVFDKFKKNCGVVFSSGRTWKEMRRFSLMTLRNFGMGRR 139
Query: 609 SIEERVQEEARCLVEELRKTNASPCDPTFLLGCAPCNVICSIIFHNRFDYTDPNFLTLLE 788
SIE+R+QEEARCLV+ELRKT PCDPTF+LGCAPCNVICSI+F NRFDY D FLT L+
Sbjct: 140 SIEDRIQEEARCLVDELRKTKGEPCDPTFILGCAPCNVICSIVFQNRFDYKDQEFLTFLD 199
Query: 789 KLNENFRILSSPWIQVCNNFPALIDYLPGSHNKVLKNSAYVKSYILEKVKEHQASLDVND 968
LNEN ILSSPWIQ+CNNFPA+IDYLPG H K+ KN A+ + Y L KVK+HQ SLD+N+
Sbjct: 200 ILNENVEILSSPWIQICNNFPAVIDYLPGRHRKLHKNFAFAEHYFLSKVKQHQESLDINN 259
Query: 969 PRDFIDCFLIQMEQEKHN 1022
PRDFIDCFLI+MEQEKHN
Sbjct: 260 PRDFIDCFLIKMEQEKHN 277
>ref|NP_031841.3| cytochrome P450 2C29 [Mus musculus].
Length = 490
Score = 409 bits (1052), Expect = e-114
Identities = 185/260 (71%), Positives = 225/260 (86%)
Frame = +3
Query: 249 WKQNSGKGRLPPGPTPLSILGNILQLDVKDISKSLSNLSKVYGPVFTVYFGLKPAVVLHG 428
W+Q+SG+G+LPPGPTPL I+GN LQ+DVK+IS+S +N SK YGPVFT+Y G KP V+LHG
Sbjct: 20 WRQSSGRGKLPPGPTPLPIIGNFLQIDVKNISQSFTNFSKAYGPVFTLYLGSKPTVILHG 79
Query: 429 YEAVKEALIDGGEEFSGRGHFPMAERVNKGHGIIFSSGKRWKETRRFSLMTLRNFGMGKR 608
YEAVKEALID GEEF+GRG FPMAE++ KG G++FS+G RWKE RRF+LMTLRN GMGKR
Sbjct: 80 YEAVKEALIDRGEEFAGRGSFPMAEKIIKGFGVVFSNGNRWKEMRRFTLMTLRNLGMGKR 139
Query: 609 SIEERVQEEARCLVEELRKTNASPCDPTFLLGCAPCNVICSIIFHNRFDYTDPNFLTLLE 788
+IE+RVQEEA+CLVEELRKT SPCDPTF+L CAPCNVICSIIF NRFDY D FL L++
Sbjct: 140 NIEDRVQEEAQCLVEELRKTKGSPCDPTFILSCAPCNVICSIIFQNRFDYKDKEFLILMD 199
Query: 789 KLNENFRILSSPWIQVCNNFPALIDYLPGSHNKVLKNSAYVKSYILEKVKEHQASLDVND 968
K+NEN +ILSSPW+QVCN+FP+LIDY PGSH+K++KN Y+KSY+LEK+KEH+ SLDV +
Sbjct: 200 KINENVKILSSPWLQVCNSFPSLIDYCPGSHHKIVKNFNYLKSYLLEKIKEHKESLDVTN 259
Query: 969 PRDFIDCFLIQMEQEKHNHQ 1028
PRDFID +LI+ +Q H Q
Sbjct: 260 PRDFIDYYLIKQKQVNHIEQ 279
>ref|NP_082365.1| cytochrome P450 2C55 [Mus musculus].
Length = 490
Score = 404 bits (1039), Expect = e-113
Identities = 187/258 (72%), Positives = 222/258 (86%)
Frame = +3
Query: 249 WKQNSGKGRLPPGPTPLSILGNILQLDVKDISKSLSNLSKVYGPVFTVYFGLKPAVVLHG 428
W+QNSG+G+LPPGPTP I+GNILQ+D+K+ISKS + SKVYGPVFT+YFG KP VV+HG
Sbjct: 20 WRQNSGRGKLPPGPTPFPIIGNILQIDIKNISKSFNYFSKVYGPVFTLYFGSKPTVVVHG 79
Query: 429 YEAVKEALIDGGEEFSGRGHFPMAERVNKGHGIIFSSGKRWKETRRFSLMTLRNFGMGKR 608
YEAVKEAL D GEEFSGRG F + ER+N G+IFS+G +WKE RRFS+MTLR+FGMGKR
Sbjct: 80 YEAVKEALDDLGEEFSGRGSFQIFERINNDLGVIFSNGTKWKELRRFSIMTLRSFGMGKR 139
Query: 609 SIEERVQEEARCLVEELRKTNASPCDPTFLLGCAPCNVICSIIFHNRFDYTDPNFLTLLE 788
SIE+R+QEEA CLVEELRK N S CDPTF+L CAP NVICS+IFHNRFDY D FL L+E
Sbjct: 140 SIEDRIQEEASCLVEELRKANGSLCDPTFILSCAPSNVICSVIFHNRFDYKDEKFLNLME 199
Query: 789 KLNENFRILSSPWIQVCNNFPALIDYLPGSHNKVLKNSAYVKSYILEKVKEHQASLDVND 968
+LNENF+IL+SPW+QV N P LI+YLPGSHNKV+KN +KSYIL +VKEHQ +LD+++
Sbjct: 200 RLNENFKILNSPWMQVYNALPTLINYLPGSHNKVIKNFTEIKSYILGRVKEHQETLDMDN 259
Query: 969 PRDFIDCFLIQMEQEKHN 1022
PRDFIDCFLI+MEQEKHN
Sbjct: 260 PRDFIDCFLIKMEQEKHN 277
>ref|NP_034133.2| cytochrome P450 2C39 [Mus musculus].
Length = 490
Score = 403 bits (1036), Expect = e-112
Identities = 184/260 (70%), Positives = 219/260 (84%)
Frame = +3
Query: 249 WKQNSGKGRLPPGPTPLSILGNILQLDVKDISKSLSNLSKVYGPVFTVYFGLKPAVVLHG 428
W+Q+ G+G LPPGPTP I+GN LQ+D+K++S+SL+N SK YGPVFT+Y G +P VVLHG
Sbjct: 20 WRQSCGRGSLPPGPTPFPIIGNFLQIDIKNVSQSLTNFSKAYGPVFTLYLGSRPTVVLHG 79
Query: 429 YEAVKEALIDGGEEFSGRGHFPMAERVNKGHGIIFSSGKRWKETRRFSLMTLRNFGMGKR 608
YEAVKEALID GEEFS RG PM E++N G GI+FS+G RWKE RRF+L TLRN GMGKR
Sbjct: 80 YEAVKEALIDHGEEFSDRGSIPMVEKINNGLGIVFSNGNRWKEIRRFTLTTLRNLGMGKR 139
Query: 609 SIEERVQEEARCLVEELRKTNASPCDPTFLLGCAPCNVICSIIFHNRFDYTDPNFLTLLE 788
+IE+RVQEEA+CLVEELRKT SPCDPTF+L CAPCNVICSIIF +RFDY D +FL L+E
Sbjct: 140 NIEDRVQEEAQCLVEELRKTKGSPCDPTFILSCAPCNVICSIIFQDRFDYKDKDFLMLME 199
Query: 789 KLNENFRILSSPWIQVCNNFPALIDYLPGSHNKVLKNSAYVKSYILEKVKEHQASLDVND 968
KLNEN +ILSSPW+QVCNNFP LIDY PGSH+KVLKN Y++SY+LEK+KEHQ SLDV +
Sbjct: 200 KLNENVKILSSPWLQVCNNFPLLIDYCPGSHHKVLKNVKYIRSYLLEKIKEHQESLDVTN 259
Query: 969 PRDFIDCFLIQMEQEKHNHQ 1028
PRDFID +LI+ +Q H Q
Sbjct: 260 PRDFIDYYLIKQKQANHIQQ 279
>ref|NP_034132.2| cytochrome P450 2C38 [Mus musculus].
Length = 490
Score = 402 bits (1032), Expect = e-112
Identities = 186/260 (71%), Positives = 220/260 (84%)
Frame = +3
Query: 249 WKQNSGKGRLPPGPTPLSILGNILQLDVKDISKSLSNLSKVYGPVFTVYFGLKPAVVLHG 428
W+Q S +GRLPPGPTP I+GN LQ+DVK+ ++SL+N SK YGPVFT+Y G +P VVLHG
Sbjct: 20 WRQRSRRGRLPPGPTPFPIIGNFLQIDVKNFNQSLTNFSKTYGPVFTLYLGSRPIVVLHG 79
Query: 429 YEAVKEALIDGGEEFSGRGHFPMAERVNKGHGIIFSSGKRWKETRRFSLMTLRNFGMGKR 608
YEAVKEALID GEEFSGR + PM+E++N G GI FS+G WKETRRF+LMTLRN GMGKR
Sbjct: 80 YEAVKEALIDHGEEFSGRENIPMSEKINNGLGITFSNGNSWKETRRFTLMTLRNLGMGKR 139
Query: 609 SIEERVQEEARCLVEELRKTNASPCDPTFLLGCAPCNVICSIIFHNRFDYTDPNFLTLLE 788
+IE+RV+EEA+CLVEELRKT SPCDPTF+L CAPCNVICSIIF +RFDY D +FL L++
Sbjct: 140 NIEDRVREEAQCLVEELRKTKGSPCDPTFILSCAPCNVICSIIFQDRFDYKDKDFLMLMK 199
Query: 789 KLNENFRILSSPWIQVCNNFPALIDYLPGSHNKVLKNSAYVKSYILEKVKEHQASLDVND 968
KLNEN +ILSSPW+QVCNNFP LIDY PGSH+KVLKN Y++SY+LEKVKEHQ SLDV +
Sbjct: 200 KLNENVKILSSPWLQVCNNFPLLIDYCPGSHHKVLKNFKYIRSYLLEKVKEHQESLDVTN 259
Query: 969 PRDFIDCFLIQMEQEKHNHQ 1028
PRDFID FLI+ +Q H Q
Sbjct: 260 PRDFIDYFLIKQKQANHIEQ 279
>ref|NP_598905.2| cytochrome P450 2C50 isoform 1 [Mus musculus].
Length = 490
Score = 393 bits (1009), Expect = e-109
Identities = 183/259 (70%), Positives = 216/259 (83%)
Frame = +3
Query: 249 WKQNSGKGRLPPGPTPLSILGNILQLDVKDISKSLSNLSKVYGPVFTVYFGLKPAVVLHG 428
W+Q+S +G+LPPGPTPL I+GNILQ++VKDI +S +NLSKVYGPV+T+Y G KP VVLHG
Sbjct: 20 WRQSSERGKLPPGPTPLPIIGNILQINVKDICQSFTNLSKVYGPVYTLYLGRKPTVVLHG 79
Query: 429 YEAVKEALIDGGEEFSGRGHFPMAERVNKGHGIIFSSGKRWKETRRFSLMTLRNFGMGKR 608
YEAVKEAL+D GEEF+GRG P+ ++ G GIIFS G WK TRRFSL TLRN GMGKR
Sbjct: 80 YEAVKEALVDHGEEFAGRGRLPVFDKATNGMGIIFSKGNVWKNTRRFSLTTLRNLGMGKR 139
Query: 609 SIEERVQEEARCLVEELRKTNASPCDPTFLLGCAPCNVICSIIFHNRFDYTDPNFLTLLE 788
SIE+RVQEEARCLVEELRKTN SPCDPTF+LGCAPCNVICSIIF +RFDY D +FL L+E
Sbjct: 140 SIEDRVQEEARCLVEELRKTNGSPCDPTFILGCAPCNVICSIIFQDRFDYKDRDFLNLME 199
Query: 789 KLNENFRILSSPWIQVCNNFPALIDYLPGSHNKVLKNSAYVKSYILEKVKEHQASLDVND 968
KLNE +I+S+PW+QVCN FP L+DY PGSHNKV KN A +K+++LEK+KEH+ SLDV
Sbjct: 200 KLNEITKIMSTPWLQVCNTFPVLLDYCPGSHNKVFKNYACIKNFLLEKIKEHEESLDVTI 259
Query: 969 PRDFIDCFLIQMEQEKHNH 1025
PRDFID FLI QE N+
Sbjct: 260 PRDFIDYFLINGGQENGNY 278
>ref|NP_034131.2| cytochrome P450 2C37 [Mus musculus].
Length = 490
Score = 392 bits (1006), Expect = e-109
Identities = 182/258 (70%), Positives = 215/258 (83%)
Frame = +3
Query: 249 WKQNSGKGRLPPGPTPLSILGNILQLDVKDISKSLSNLSKVYGPVFTVYFGLKPAVVLHG 428
W+Q+S +G+LPPGPTPL I+GNILQ+DVKDI +S +NLSKVYGPV+T+Y G KP VVLHG
Sbjct: 20 WRQSSERGKLPPGPTPLPIIGNILQIDVKDICQSFTNLSKVYGPVYTLYLGRKPTVVLHG 79
Query: 429 YEAVKEALIDGGEEFSGRGHFPMAERVNKGHGIIFSSGKRWKETRRFSLMTLRNFGMGKR 608
YEAVKEAL+D GEEF+GRG FP+ ++ G G+ FS G WK TRRFSLMTLRN GMGKR
Sbjct: 80 YEAVKEALVDHGEEFAGRGRFPVFDKATNGMGLAFSKGNVWKNTRRFSLMTLRNLGMGKR 139
Query: 609 SIEERVQEEARCLVEELRKTNASPCDPTFLLGCAPCNVICSIIFHNRFDYTDPNFLTLLE 788
SIE+RVQEEARCLVEELRKTN SPCDPTF+LGCAPCNVICSIIF +RFDY D +FL L+E
Sbjct: 140 SIEDRVQEEARCLVEELRKTNGSPCDPTFILGCAPCNVICSIIFQDRFDYKDRDFLNLME 199
Query: 789 KLNENFRILSSPWIQVCNNFPALIDYLPGSHNKVLKNSAYVKSYILEKVKEHQASLDVND 968
KLNE +ILSSPW+Q+CN +PAL+DY PGSH + KN A +K+++LEK+KEH+ SLDV
Sbjct: 200 KLNEITKILSSPWLQICNTYPALLDYCPGSHKQFFKNYASIKNFLLEKIKEHEESLDVTI 259
Query: 969 PRDFIDCFLIQMEQEKHN 1022
PRDFID FLI QE N
Sbjct: 260 PRDFIDYFLINGGQEDGN 277
>ref|NP_996260.1| cytochrome P450 2C54 [Mus musculus].
Length = 490
Score = 388 bits (996), Expect = e-108
Identities = 180/259 (69%), Positives = 216/259 (83%)
Frame = +3
Query: 249 WKQNSGKGRLPPGPTPLSILGNILQLDVKDISKSLSNLSKVYGPVFTVYFGLKPAVVLHG 428
W+Q+ +G+LPPGPTPL I+GNILQ+DVKDI +S +NLS+VYGPV+T+Y G KP VVLHG
Sbjct: 20 WRQSYERGKLPPGPTPLPIIGNILQIDVKDICQSFTNLSRVYGPVYTLYLGRKPTVVLHG 79
Query: 429 YEAVKEALIDGGEEFSGRGHFPMAERVNKGHGIIFSSGKRWKETRRFSLMTLRNFGMGKR 608
YEAVKEAL+D G+ F+GRG P+ ++ G GI FS+G WK TR FSLMTLRN GMGKR
Sbjct: 80 YEAVKEALVDHGDVFAGRGRLPVFDKATNGMGIGFSNGSVWKNTRHFSLMTLRNLGMGKR 139
Query: 609 SIEERVQEEARCLVEELRKTNASPCDPTFLLGCAPCNVICSIIFHNRFDYTDPNFLTLLE 788
SIE+RVQEEARCLVEELRKTN SPCDPTF+LGCAPCNVICSIIF +RFDY D +FL LLE
Sbjct: 140 SIEDRVQEEARCLVEELRKTNGSPCDPTFILGCAPCNVICSIIFQDRFDYKDRDFLNLLE 199
Query: 789 KLNENFRILSSPWIQVCNNFPALIDYLPGSHNKVLKNSAYVKSYILEKVKEHQASLDVND 968
KL+E +ILS+PW+QVCN FPAL+DY PGSHN+ KN AY+K+++LEK++EH+ SLDV
Sbjct: 200 KLDEISKILSTPWLQVCNTFPALLDYCPGSHNQFFKNYAYIKNFLLEKIREHKESLDVTI 259
Query: 969 PRDFIDCFLIQMEQEKHNH 1025
PRDFID FLI+ QE NH
Sbjct: 260 PRDFIDYFLIKGAQEDDNH 278
>ref|NP_001161377.1| cytochrome P450, family 2, subfamily c, polypeptide 44 isoform 2 [Mus
musculus].
Length = 456
Score = 352 bits (902), Expect = 4e-97
Identities = 167/258 (64%), Positives = 202/258 (78%)
Frame = +3
Query: 249 WKQNSGKGRLPPGPTPLSILGNILQLDVKDISKSLSNLSKVYGPVFTVYFGLKPAVVLHG 428
W + GRLPPGPTPL I+GNILQLD+KDI SLS L+K YGPV+T+YFG P VVLHG
Sbjct: 24 WTKMRTGGRLPPGPTPLPIIGNILQLDLKDIPASLSKLAKEYGPVYTLYFGSWPTVVLHG 83
Query: 429 YEAVKEALIDGGEEFSGRGHFPMAERVNKGHGIIFSSGKRWKETRRFSLMTLRNFGMGKR 608
Y+ VKEAL++ G+EF GRG P+ E KGHGI+FS G+RWK RRFSLMTL+NFGMGKR
Sbjct: 84 YDVVKEALLNQGDEFLGRGPLPIIEDSQKGHGIVFSEGERWKLLRRFSLMTLKNFGMGKR 143
Query: 609 SIEERVQEEARCLVEELRKTNASPCDPTFLLGCAPCNVICSIIFHNRFDYTDPNFLTLLE 788
S+EERVQEEARCLVEEL KT A P DPTF+L CAPCNVICSI+F+ RF Y D FL L++
Sbjct: 144 SLEERVQEEARCLVEELHKTEAQPFDPTFILACAPCNVICSILFNERFPYNDKTFLNLMD 203
Query: 789 KLNENFRILSSPWIQVCNNFPALIDYLPGSHNKVLKNSAYVKSYILEKVKEHQASLDVND 968
LN+NF L+S WIQ+ N +P ++ Y+PG H + K VK++ILEKVKEHQ SLD +
Sbjct: 204 LLNKNFYQLNSIWIQMYNLWPTIMKYIPGKHREFSKRLGGVKNFILEKVKEHQESLDPAN 263
Query: 969 PRDFIDCFLIQMEQEKHN 1022
PRD+IDCFL ++E+EKHN
Sbjct: 264 PRDYIDCFLSKIEEEKHN 281
Database: RefSeq49_MP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 15,617,559
Number of sequences in database: 30,036
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 30036
Number of Hits to DB: 34,473,317
Number of extensions: 894173
Number of successful extensions: 2860
Number of sequences better than 1.0e-05: 59
Number of HSP's gapped: 2823
Number of HSP's successfully gapped: 59
Length of query: 360
Length of database: 15,617,559
Length adjustment: 103
Effective length of query: 257
Effective length of database: 12,523,851
Effective search space: 3218629707
Effective search space used: 3218629707
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)
Search to RefSeqHP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-013971
(1082 letters)
Database: RefSeq49_HP.fasta
32,964 sequences; 18,297,164 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_000763.1| cytochrome P450 2C18 isoform 1 [Homo sapiens]. 463 e-130
Alignment gi|NP_000762.2| cytochrome P450 2C9 [Homo sapiens]. 453 e-127
Alignment gi|NP_000760.1| cytochrome P450 2C19 [Homo sapiens]. 446 e-125
Alignment gi|NP_000761.3| cytochrome P450 2C8 isoform a [Homo sapiens]. 426 e-119
Alignment gi|NP_001122397.1| cytochrome P450 2C18 isoform 2 [Homo sapiens]. 350 1e-96
Alignment gi|NP_001185784.1| cytochrome P450 2C8 isoform b [Homo sapiens]. 347 8e-96
Alignment gi|NP_001185782.1| cytochrome P450 2C8 isoform b [Homo sapiens]. 347 8e-96
Alignment gi|NP_000764.1| cytochrome P450 2E1 [Homo sapiens]. 314 1e-85
Alignment gi|NP_001185783.1| cytochrome P450 2C8 isoform c [Homo sapiens]. 291 9e-79
Alignment gi|NP_000765.2| cytochrome P450 2F1 [Homo sapiens]. 287 1e-77
>ref|NP_000763.1| cytochrome P450 2C18 isoform 1 [Homo sapiens].
Length = 490
Score = 463 bits (1191), Expect = e-130
Identities = 216/260 (83%), Positives = 239/260 (91%)
Frame = +3
Query: 249 WKQNSGKGRLPPGPTPLSILGNILQLDVKDISKSLSNLSKVYGPVFTVYFGLKPAVVLHG 428
W+Q+SG+GRLP GPTPL I+GNILQLDVKD+SKSL+N SKVYGPVFTVYFGLKP VVLHG
Sbjct: 20 WRQSSGRGRLPSGPTPLPIIGNILQLDVKDMSKSLTNFSKVYGPVFTVYFGLKPIVVLHG 79
Query: 429 YEAVKEALIDGGEEFSGRGHFPMAERVNKGHGIIFSSGKRWKETRRFSLMTLRNFGMGKR 608
YEAVKEALID GEEFSGRG FP+AE+VNKG GI+FS+GKRWKE RRF LMTLRNFGMGKR
Sbjct: 80 YEAVKEALIDHGEEFSGRGSFPVAEKVNKGLGILFSNGKRWKEIRRFCLMTLRNFGMGKR 139
Query: 609 SIEERVQEEARCLVEELRKTNASPCDPTFLLGCAPCNVICSIIFHNRFDYTDPNFLTLLE 788
SIE+RVQEEARCLVEELRKTNASPCDPTF+LGCAPCNVICS+IFH+RFDY D FL L+E
Sbjct: 140 SIEDRVQEEARCLVEELRKTNASPCDPTFILGCAPCNVICSVIFHDRFDYKDQRFLNLME 199
Query: 789 KLNENFRILSSPWIQVCNNFPALIDYLPGSHNKVLKNSAYVKSYILEKVKEHQASLDVND 968
K NEN RILSSPWIQVCNNFPALIDYLPGSHNK+ +N AY+KSY+LE++KEHQ SLD+N
Sbjct: 200 KFNENLRILSSPWIQVCNNFPALIDYLPGSHNKIAENFAYIKSYVLERIKEHQESLDMNS 259
Query: 969 PRDFIDCFLIQMEQEKHNHQ 1028
RDFIDCFLI+MEQEKHN Q
Sbjct: 260 ARDFIDCFLIKMEQEKHNQQ 279
>ref|NP_000762.2| cytochrome P450 2C9 [Homo sapiens].
Length = 490
Score = 453 bits (1166), Expect = e-127
Identities = 211/271 (77%), Positives = 244/271 (90%)
Frame = +3
Query: 249 WKQNSGKGRLPPGPTPLSILGNILQLDVKDISKSLSNLSKVYGPVFTVYFGLKPAVVLHG 428
W+Q+SG+G+LPPGPTPL ++GNILQ+ +KDISKSL+NLSKVYGPVFT+YFGLKP VVLHG
Sbjct: 20 WRQSSGRGKLPPGPTPLPVIGNILQIGIKDISKSLTNLSKVYGPVFTLYFGLKPIVVLHG 79
Query: 429 YEAVKEALIDGGEEFSGRGHFPMAERVNKGHGIIFSSGKRWKETRRFSLMTLRNFGMGKR 608
YEAVKEALID GEEFSGRG FP+AER N+G GI+FS+GK+WKE RRFSLMTLRNFGMGKR
Sbjct: 80 YEAVKEALIDLGEEFSGRGIFPLAERANRGFGIVFSNGKKWKEIRRFSLMTLRNFGMGKR 139
Query: 609 SIEERVQEEARCLVEELRKTNASPCDPTFLLGCAPCNVICSIIFHNRFDYTDPNFLTLLE 788
SIE+RVQEEARCLVEELRKT ASPCDPTF+LGCAPCNVICSIIFH RFDY D FL L+E
Sbjct: 140 SIEDRVQEEARCLVEELRKTKASPCDPTFILGCAPCNVICSIIFHKRFDYKDQQFLNLME 199
Query: 789 KLNENFRILSSPWIQVCNNFPALIDYLPGSHNKVLKNSAYVKSYILEKVKEHQASLDVND 968
KLNEN +ILSSPWIQ+CNNF +IDY PG+HNK+LKN A++KSYILEKVKEHQ S+D+N+
Sbjct: 200 KLNENIKILSSPWIQICNNFSPIIDYFPGTHNKLLKNVAFMKSYILEKVKEHQESMDMNN 259
Query: 969 PRDFIDCFLIQMEQEKHNHQGGHFTF*KLDN 1061
P+DFIDCFL++ME+EKHN Q FT L+N
Sbjct: 260 PQDFIDCFLMKMEKEKHN-QPSEFTIESLEN 289
>ref|NP_000760.1| cytochrome P450 2C19 [Homo sapiens].
Length = 490
Score = 446 bits (1148), Expect = e-125
Identities = 203/260 (78%), Positives = 237/260 (91%)
Frame = +3
Query: 249 WKQNSGKGRLPPGPTPLSILGNILQLDVKDISKSLSNLSKVYGPVFTVYFGLKPAVVLHG 428
W+Q+SG+G+LPPGPTPL ++GNILQ+D+KD+SKSL+NLSK+YGPVFT+YFGL+ VVLHG
Sbjct: 20 WRQSSGRGKLPPGPTPLPVIGNILQIDIKDVSKSLTNLSKIYGPVFTLYFGLERMVVLHG 79
Query: 429 YEAVKEALIDGGEEFSGRGHFPMAERVNKGHGIIFSSGKRWKETRRFSLMTLRNFGMGKR 608
YE VKEALID GEEFSGRGHFP+AER N+G GI+FS+GKRWKE RRFSLMTLRNFGMGKR
Sbjct: 80 YEVVKEALIDLGEEFSGRGHFPLAERANRGFGIVFSNGKRWKEIRRFSLMTLRNFGMGKR 139
Query: 609 SIEERVQEEARCLVEELRKTNASPCDPTFLLGCAPCNVICSIIFHNRFDYTDPNFLTLLE 788
SIE+RVQEEARCLVEELRKT ASPCDPTF+LGCAPCNVICSIIF RFDY D FL L+E
Sbjct: 140 SIEDRVQEEARCLVEELRKTKASPCDPTFILGCAPCNVICSIIFQKRFDYKDQQFLNLME 199
Query: 789 KLNENFRILSSPWIQVCNNFPALIDYLPGSHNKVLKNSAYVKSYILEKVKEHQASLDVND 968
KLNEN RI+S+PWIQ+CNNFP +IDY PG+HNK+LKN A+++S ILEKVKEHQ S+D+N+
Sbjct: 200 KLNENIRIVSTPWIQICNNFPTIIDYFPGTHNKLLKNLAFMESDILEKVKEHQESMDINN 259
Query: 969 PRDFIDCFLIQMEQEKHNHQ 1028
PRDFIDCFLI+ME+EK N Q
Sbjct: 260 PRDFIDCFLIKMEKEKQNQQ 279
>ref|NP_000761.3| cytochrome P450 2C8 isoform a [Homo sapiens].
Length = 490
Score = 426 bits (1096), Expect = e-119
Identities = 199/260 (76%), Positives = 227/260 (87%)
Frame = +3
Query: 249 WKQNSGKGRLPPGPTPLSILGNILQLDVKDISKSLSNLSKVYGPVFTVYFGLKPAVVLHG 428
W+Q+ + +LPPGPTPL I+GN+LQ+DVKDI KS +N SKVYGPVFTVYFG+ P VV HG
Sbjct: 20 WRQSCRRRKLPPGPTPLPIIGNMLQIDVKDICKSFTNFSKVYGPVFTVYFGMNPIVVFHG 79
Query: 429 YEAVKEALIDGGEEFSGRGHFPMAERVNKGHGIIFSSGKRWKETRRFSLMTLRNFGMGKR 608
YEAVKEALID GEEFSGRG+ P+++R+ KG GII S+GKRWKE RRFSL TLRNFGMGKR
Sbjct: 80 YEAVKEALIDNGEEFSGRGNSPISQRITKGLGIISSNGKRWKEIRRFSLTTLRNFGMGKR 139
Query: 609 SIEERVQEEARCLVEELRKTNASPCDPTFLLGCAPCNVICSIIFHNRFDYTDPNFLTLLE 788
SIE+RVQEEA CLVEELRKT ASPCDPTF+LGCAPCNVICS++F RFDY D NFLTL++
Sbjct: 140 SIEDRVQEEAHCLVEELRKTKASPCDPTFILGCAPCNVICSVVFQKRFDYKDQNFLTLMK 199
Query: 789 KLNENFRILSSPWIQVCNNFPALIDYLPGSHNKVLKNSAYVKSYILEKVKEHQASLDVND 968
+ NENFRIL+SPWIQVCNNFP LID PG+HNKVLKN A +SYI EKVKEHQASLDVN+
Sbjct: 200 RFNENFRILNSPWIQVCNNFPLLIDCFPGTHNKVLKNVALTRSYIREKVKEHQASLDVNN 259
Query: 969 PRDFIDCFLIQMEQEKHNHQ 1028
PRDFIDCFLI+MEQEK N +
Sbjct: 260 PRDFIDCFLIKMEQEKDNQK 279
>ref|NP_001122397.1| cytochrome P450 2C18 isoform 2 [Homo sapiens].
Length = 431
Score = 350 bits (899), Expect = 1e-96
Identities = 166/199 (83%), Positives = 182/199 (91%)
Frame = +3
Query: 249 WKQNSGKGRLPPGPTPLSILGNILQLDVKDISKSLSNLSKVYGPVFTVYFGLKPAVVLHG 428
W+Q+SG+GRLP GPTPL I+GNILQLDVKD+SKSL+N SKVYGPVFTVYFGLKP VVLHG
Sbjct: 20 WRQSSGRGRLPSGPTPLPIIGNILQLDVKDMSKSLTNFSKVYGPVFTVYFGLKPIVVLHG 79
Query: 429 YEAVKEALIDGGEEFSGRGHFPMAERVNKGHGIIFSSGKRWKETRRFSLMTLRNFGMGKR 608
YEAVKEALID GEEFSGRG FP+AE+VNKG GI+FS+GKRWKE RRF LMTLRNFGMGKR
Sbjct: 80 YEAVKEALIDHGEEFSGRGSFPVAEKVNKGLGILFSNGKRWKEIRRFCLMTLRNFGMGKR 139
Query: 609 SIEERVQEEARCLVEELRKTNASPCDPTFLLGCAPCNVICSIIFHNRFDYTDPNFLTLLE 788
SIE+RVQEEARCLVEELRKTNASPCDPTF+LGCAPCNVICS+IFH+RFDY D FL L+E
Sbjct: 140 SIEDRVQEEARCLVEELRKTNASPCDPTFILGCAPCNVICSVIFHDRFDYKDQRFLNLME 199
Query: 789 KLNENFRILSSPWIQVCNN 845
K NEN RILSSPWIQ +N
Sbjct: 200 KFNENLRILSSPWIQEKHN 218
>ref|NP_001185784.1| cytochrome P450 2C8 isoform b [Homo sapiens].
Length = 420
Score = 347 bits (891), Expect = 8e-96
Identities = 163/209 (77%), Positives = 183/209 (87%)
Frame = +3
Query: 402 LKPAVVLHGYEAVKEALIDGGEEFSGRGHFPMAERVNKGHGIIFSSGKRWKETRRFSLMT 581
+ P VV HGYEAVKEALID GEEFSGRG+ P+++R+ KG GII S+GKRWKE RRFSL T
Sbjct: 1 MNPIVVFHGYEAVKEALIDNGEEFSGRGNSPISQRITKGLGIISSNGKRWKEIRRFSLTT 60
Query: 582 LRNFGMGKRSIEERVQEEARCLVEELRKTNASPCDPTFLLGCAPCNVICSIIFHNRFDYT 761
LRNFGMGKRSIE+RVQEEA CLVEELRKT ASPCDPTF+LGCAPCNVICS++F RFDY
Sbjct: 61 LRNFGMGKRSIEDRVQEEAHCLVEELRKTKASPCDPTFILGCAPCNVICSVVFQKRFDYK 120
Query: 762 DPNFLTLLEKLNENFRILSSPWIQVCNNFPALIDYLPGSHNKVLKNSAYVKSYILEKVKE 941
D NFLTL+++ NENFRIL+SPWIQVCNNFP LID PG+HNKVLKN A +SYI EKVKE
Sbjct: 121 DQNFLTLMKRFNENFRILNSPWIQVCNNFPLLIDCFPGTHNKVLKNVALTRSYIREKVKE 180
Query: 942 HQASLDVNDPRDFIDCFLIQMEQEKHNHQ 1028
HQASLDVN+PRDFIDCFLI+MEQEK N +
Sbjct: 181 HQASLDVNNPRDFIDCFLIKMEQEKDNQK 209
>ref|NP_001185782.1| cytochrome P450 2C8 isoform b [Homo sapiens].
Length = 420
Score = 347 bits (891), Expect = 8e-96
Identities = 163/209 (77%), Positives = 183/209 (87%)
Frame = +3
Query: 402 LKPAVVLHGYEAVKEALIDGGEEFSGRGHFPMAERVNKGHGIIFSSGKRWKETRRFSLMT 581
+ P VV HGYEAVKEALID GEEFSGRG+ P+++R+ KG GII S+GKRWKE RRFSL T
Sbjct: 1 MNPIVVFHGYEAVKEALIDNGEEFSGRGNSPISQRITKGLGIISSNGKRWKEIRRFSLTT 60
Query: 582 LRNFGMGKRSIEERVQEEARCLVEELRKTNASPCDPTFLLGCAPCNVICSIIFHNRFDYT 761
LRNFGMGKRSIE+RVQEEA CLVEELRKT ASPCDPTF+LGCAPCNVICS++F RFDY
Sbjct: 61 LRNFGMGKRSIEDRVQEEAHCLVEELRKTKASPCDPTFILGCAPCNVICSVVFQKRFDYK 120
Query: 762 DPNFLTLLEKLNENFRILSSPWIQVCNNFPALIDYLPGSHNKVLKNSAYVKSYILEKVKE 941
D NFLTL+++ NENFRIL+SPWIQVCNNFP LID PG+HNKVLKN A +SYI EKVKE
Sbjct: 121 DQNFLTLMKRFNENFRILNSPWIQVCNNFPLLIDCFPGTHNKVLKNVALTRSYIREKVKE 180
Query: 942 HQASLDVNDPRDFIDCFLIQMEQEKHNHQ 1028
HQASLDVN+PRDFIDCFLI+MEQEK N +
Sbjct: 181 HQASLDVNNPRDFIDCFLIKMEQEKDNQK 209
>ref|NP_000764.1| cytochrome P450 2E1 [Homo sapiens].
Length = 493
Score = 314 bits (804), Expect = 1e-85
Identities = 147/258 (56%), Positives = 188/258 (72%)
Frame = +3
Query: 249 WKQNSGKGRLPPGPTPLSILGNILQLDVKDISKSLSNLSKVYGPVFTVYFGLKPAVVLHG 428
W+Q LPPGP PL I+GN+ QL++K+I KS + L++ +GPVFT+Y G + VV+HG
Sbjct: 23 WRQVHSSWNLPPGPFPLPIIGNLFQLELKNIPKSFTRLAQRFGPVFTLYVGSQRMVVMHG 82
Query: 429 YEAVKEALIDGGEEFSGRGHFPMAERVNKGHGIIFSSGKRWKETRRFSLMTLRNFGMGKR 608
Y+AVKEAL+D +EFSGRG P A ++ GIIF++G WK+ RRFSL TLRN+GMGK+
Sbjct: 83 YKAVKEALLDYKDEFSGRGDLP-AFHAHRDRGIIFNNGPTWKDIRRFSLTTLRNYGMGKQ 141
Query: 609 SIEERVQEEARCLVEELRKTNASPCDPTFLLGCAPCNVICSIIFHNRFDYTDPNFLTLLE 788
E R+Q EA L+E LRKT P DPTFL+GCAPCNVI I+F FDY D FL L+
Sbjct: 142 GNESRIQREAHFLLEALRKTQGQPFDPTFLIGCAPCNVIADILFRKHFDYNDEKFLRLMY 201
Query: 789 KLNENFRILSSPWIQVCNNFPALIDYLPGSHNKVLKNSAYVKSYILEKVKEHQASLDVND 968
NENF +LS+PW+Q+ NNFP+ + YLPGSH KV+KN A VK Y+ E+VKEH SLD N
Sbjct: 202 LFNENFHLLSTPWLQLYNNFPSFLHYLPGSHRKVIKNVAEVKEYVSERVKEHHQSLDPNC 261
Query: 969 PRDFIDCFLIQMEQEKHN 1022
PRD DC L++ME+EKH+
Sbjct: 262 PRDLTDCLLVEMEKEKHS 279
>ref|NP_001185783.1| cytochrome P450 2C8 isoform c [Homo sapiens].
Length = 388
Score = 291 bits (744), Expect = 9e-79
Identities = 136/169 (80%), Positives = 150/169 (88%)
Frame = +3
Query: 522 GIIFSSGKRWKETRRFSLMTLRNFGMGKRSIEERVQEEARCLVEELRKTNASPCDPTFLL 701
GII S+GKRWKE RRFSL TLRNFGMGKRSIE+RVQEEA CLVEELRKT ASPCDPTF+L
Sbjct: 9 GIISSNGKRWKEIRRFSLTTLRNFGMGKRSIEDRVQEEAHCLVEELRKTKASPCDPTFIL 68
Query: 702 GCAPCNVICSIIFHNRFDYTDPNFLTLLEKLNENFRILSSPWIQVCNNFPALIDYLPGSH 881
GCAPCNVICS++F RFDY D NFLTL+++ NENFRIL+SPWIQVCNNFP LID PG+H
Sbjct: 69 GCAPCNVICSVVFQKRFDYKDQNFLTLMKRFNENFRILNSPWIQVCNNFPLLIDCFPGTH 128
Query: 882 NKVLKNSAYVKSYILEKVKEHQASLDVNDPRDFIDCFLIQMEQEKHNHQ 1028
NKVLKN A +SYI EKVKEHQASLDVN+PRDFIDCFLI+MEQEK N +
Sbjct: 129 NKVLKNVALTRSYIREKVKEHQASLDVNNPRDFIDCFLIKMEQEKDNQK 177
>ref|NP_000765.2| cytochrome P450 2F1 [Homo sapiens].
Length = 491
Score = 287 bits (735), Expect = 1e-77
Identities = 137/252 (54%), Positives = 182/252 (72%)
Frame = +3
Query: 267 KGRLPPGPTPLSILGNILQLDVKDISKSLSNLSKVYGPVFTVYFGLKPAVVLHGYEAVKE 446
KG+LPPGP PLSILGN+L L +D+ SL+ LSK YG ++TV+ G + VVL GY+AVKE
Sbjct: 27 KGKLPPGPRPLSILGNLLLLCSQDMLTSLTKLSKEYGSMYTVHLGPRRVVVLSGYQAVKE 86
Query: 447 ALIDGGEEFSGRGHFPMAERVNKGHGIIFSSGKRWKETRRFSLMTLRNFGMGKRSIEERV 626
AL+D GEEFSGRG +P KG+GI FSSG RWK R+FS+ LRNFGMGKRSIEER+
Sbjct: 87 ALVDQGEEFSGRGDYPAFFNFTKGNGIAFSSGDRWKVLRQFSIQILRNFGMGKRSIEERI 146
Query: 627 QEEARCLVEELRKTNASPCDPTFLLGCAPCNVICSIIFHNRFDYTDPNFLTLLEKLNENF 806
EE L+ ELRKT P DPTF+L + N+ICS++F +RFDY D LT++ +N+NF
Sbjct: 147 LEEGSFLLAELRKTEGEPFDPTFVLSRSVSNIICSVLFGSRFDYDDERLLTIIRLINDNF 206
Query: 807 RILSSPWIQVCNNFPALIDYLPGSHNKVLKNSAYVKSYILEKVKEHQASLDVNDPRDFID 986
+I+SSPW ++ + FP+L+D++PG H ++ +N ++ I V +HQASLD PRDFI
Sbjct: 207 QIMSSPWGELYDIFPSLLDWVPGPHQRIFQNFKCLRDLIAHSVHDHQASLDPRSPRDFIQ 266
Query: 987 CFLIQMEQEKHN 1022
CFL +M +EK +
Sbjct: 267 CFLTKMAEEKED 278
Database: RefSeq49_HP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,297,164
Number of sequences in database: 32,964
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 32964
Number of Hits to DB: 40,648,978
Number of extensions: 1065096
Number of successful extensions: 3304
Number of sequences better than 1.0e-05: 27
Number of HSP's gapped: 3286
Number of HSP's successfully gapped: 28
Length of query: 360
Length of database: 18,297,164
Length adjustment: 104
Effective length of query: 256
Effective length of database: 14,868,908
Effective search space: 3806440448
Effective search space used: 3806440448
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to Sscrofa10_2
BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-013971
(1082 letters)
Database: Sscrofa_10.2.fasta
4582 sequences; 2,808,509,378 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Sscrofa_Chr14 712 0.0
gb|GL896193.2| Sus scrofa unplaced genomic scaffold ChrUScaf4077 262 4e-67
>Sscrofa_Chr14
|| Length = 153851969
Score = 712 bits (359), Expect = 0.0
Identities = 359/359 (100%)
Strand = Plus / Plus
Query: 1 caagggcaagagcaaagaacaccacagtttaatcttcatcacagggccaaggtcccttca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 116204517 caagggcaagagcaaagaacaccacagtttaatcttcatcacagggccaaggtcccttca 116204576
Query: 61 aaagagattaaagtagacctagctaattgttcactttatgagtcagagagtcagaagtta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 116204577 aaagagattaaagtagacctagctaattgttcactttatgagtcagagagtcagaagtta 116204636
Query: 121 ttagcagggactgttataaaaaagctttagatttcaggctcccagttgtctaagtaagaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 116204637 ttagcagggactgttataaaaaagctttagatttcaggctcccagttgtctaagtaagaa 116204696
Query: 181 gagagggcatcatggatggggctgtggtcctggtgctctgtctctcctgtctgcttctcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 116204697 gagagggcatcatggatggggctgtggtcctggtgctctgtctctcctgtctgcttctcc 116204756
Query: 241 tctcactctggaaacagaactctgggaaggggaggctcccgcctggcccgactcctctct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 116204757 tctcactctggaaacagaactctgggaaggggaggctcccgcctggcccgactcctctct 116204816
Query: 301 caattcttggaaatatcctacagttagatgttaaggacatcagcaaatccttaagcaac 359
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 116204817 caattcttggaaatatcctacagttagatgttaaggacatcagcaaatccttaagcaac 116204875
Score = 656 bits (331), Expect = 0.0
Identities = 352/359 (98%)
Strand = Plus / Plus
Query: 1 caagggcaagagcaaagaacaccacagtttaatcttcatcacagggccaaggtcccttca 60
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 116112603 caagggcaagagcaaagaacaccacagtttagtcttcatcacagggccaaggtcccttca 116112662
Query: 61 aaagagattaaagtagacctagctaattgttcactttatgagtcagagagtcagaagtta 120
|||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||
Sbjct: 116112663 aaagagattaaagtagacctagctgactgttcactttatgagtcagagagtcagaagtta 116112722
Query: 121 ttagcagggactgttataaaaaagctttagatttcaggctcccagttgtctaagtaagaa 180
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 116112723 ttagcagggactgttataaaaaagctttagatttcaggctcacagttgtctaagtaagaa 116112782
Query: 181 gagagggcatcatggatggggctgtggtcctggtgctctgtctctcctgtctgcttctcc 240
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 116112783 gaaagggcatcatggatggggctgtggtcctggtgctctgtctctcctgtctgcttctcc 116112842
Query: 241 tctcactctggaaacagaactctgggaaggggaggctcccgcctggcccgactcctctct 300
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 116112843 tctcactctggaaacagaactctgggaaggggaggctcccgcctggcccgactcctctcc 116112902
Query: 301 caattcttggaaatatcctacagttagatgttaaggacatcagcaaatccttaagcaac 359
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 116112903 caattcttggaaatatcctacagttaaatgttaaggacatcagcaaatccttaagcaac 116112961
Score = 535 bits (270), Expect = e-149
Identities = 337/358 (94%), Gaps = 1/358 (0%)
Strand = Plus / Plus
Query: 1 caagggcaagagcaaagaacaccacagtttaatcttcatcacagggccaaggtcccttca 60
|||||| ||||| ||||||||||||| |||||||||||||| ||||||| ||||||||
Sbjct: 115859306 caagggtaagaggaaagaacaccacattttaatcttcatcatggggccaaagtcccttcg 115859365
Query: 61 aaagagattaaagtagacctagctaattgttcactttatgagtcagagagtcagaagtta 120
||||| ||||||||||||||||| |||||||| ||||||||||| ||||||| ||||||
Sbjct: 115859366 aaagactttaaagtagacctagctgattgttca-tttatgagtcaaagagtcacaagtta 115859424
Query: 121 ttagcagggactgttataaaaaagctttagatttcaggctcccagttgtctaagtaagaa 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 115859425 atagcagggactgttataaaaaagctttagatttcaggctcccagttgtctaagtaagaa 115859484
Query: 181 gagagggcatcatggatggggctgtggtcctggtgctctgtctctcctgtctgcttctcc 240
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 115859485 gagagggcatcattgatggggctgtggtcctggtgctctgtctctcctgtctgcttctcc 115859544
Query: 241 tctcactctggaaacagaactctgggaaggggaggctcccgcctggcccgactcctctct 300
|||||||| |||||||||||||||||| ||||| | |||| ||||||||||||||||||
Sbjct: 115859545 tctcactcgggaaacagaactctgggagggggaagttcccccctggcccgactcctctcc 115859604
Query: 301 caattcttggaaatatcctacagttagatgttaaggacatcagcaaatccttaagcaa 358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 115859605 caattcttggaaatatcctacagttagatgttaaggacatcagcaaatccttaagcaa 115859662
Score = 335 bits (169), Expect = 3e-89
Identities = 181/185 (97%)
Strand = Plus / Plus
Query: 832 aggtctgcaataatttccctgctctgattgactatctcccagggagtcataacaaagtgc 891
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 116223011 aggtctgcaataatttccctgctctgattgactatctcccagggagtcataacaaagtgc 116223070
Query: 892 ttaaaaattctgcttatgtaaaaagctatattttggagaaagtaaaagaacatcaagcat 951
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 116223071 ttaaaaattctgcttatgtaaaaagctatattttggagaaagtaaaagaacatcaagcat 116223130
Query: 952 ccctggatgttaatgaccctcgggacttcattgattgttttctgatccaaatggaacagg 1011
|||||||||||||||||||||||||||||||||||||||| |||||| | ||||||||||
Sbjct: 116223131 ccctggatgttaatgaccctcgggacttcattgattgtttcctgatcaagatggaacagg 116223190
Query: 1012 aaaaa 1016
||||
Sbjct: 116223191 taaaa 116223195
Score = 327 bits (165), Expect = 7e-87
Identities = 180/185 (97%)
Strand = Plus / Plus
Query: 832 aggtctgcaataatttccctgctctgattgactatctcccagggagtcataacaaagtgc 891
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 116129794 aggtctgcaataatttccctgctctgattgactatctcccagggagtcataacaaagtgt 116129853
Query: 892 ttaaaaattctgcttatgtaaaaagctatattttggagaaagtaaaagaacatcaagcat 951
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 116129854 ttaaaaattctgcttatgtaaaaagctatattttggagaaagtaaaagaacatcaagcat 116129913
Query: 952 ccctggatgttaatgaccctcgggacttcattgattgttttctgatccaaatggaacagg 1011
|||||||||||||||||||||||||||||||||||||||| |||||| | ||||||||||
Sbjct: 116129914 ccctggatgttaatgaccctcgggacttcattgattgtttcctgatcaagatggaacagg 116129973
Query: 1012 aaaaa 1016
||||
Sbjct: 116129974 taaaa 116129978
Score = 325 bits (164), Expect = 3e-86
Identities = 164/164 (100%)
Strand = Plus / Plus
Query: 360 ctctcaaaagtctatggccctgtattcaccgtgtattttggcttgaagcctgctgttgtg 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 116213896 ctctcaaaagtctatggccctgtattcaccgtgtattttggcttgaagcctgctgttgtg 116213955
Query: 420 ttgcatggctatgaagcagtaaaagaagccctaattgatgggggagaggaattttctgga 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 116213956 ttgcatggctatgaagcagtaaaagaagccctaattgatgggggagaggaattttctgga 116214015
Query: 480 aggggccatttcccaatggctgagagagttaataaagggcatgg 523
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 116214016 aggggccatttcccaatggctgagagagttaataaagggcatgg 116214059
Score = 325 bits (164), Expect = 3e-86
Identities = 164/164 (100%)
Strand = Plus / Plus
Query: 672 gcttcaccctgtgatcccactttcctcctgggctgtgctccctgcaatgtgatctgctcc 731
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 116217986 gcttcaccctgtgatcccactttcctcctgggctgtgctccctgcaatgtgatctgctcc 116218045
Query: 732 atcattttccacaatcgttttgattatacagatccaaattttcttaccttgttggaaaaa 791
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 116218046 atcattttccacaatcgttttgattatacagatccaaattttcttaccttgttggaaaaa 116218105
Query: 792 ctaaatgaaaacttcaggattctgagctccccgtggatccaggt 835
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 116218106 ctaaatgaaaacttcaggattctgagctccccgtggatccaggt 116218149
Score = 299 bits (151), Expect = 2e-78
Identities = 151/151 (100%)
Strand = Plus / Plus
Query: 522 ggaatcatcttcagcagtggaaagagatggaaggagacccggcgcttctccctcatgacc 581
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 116214217 ggaatcatcttcagcagtggaaagagatggaaggagacccggcgcttctccctcatgacc 116214276
Query: 582 ctgcggaattttgggatggggaagagaagcattgaggaacgggttcaagaggaagcccgc 641
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 116214277 ctgcggaattttgggatggggaagagaagcattgaggaacgggttcaagaggaagcccgc 116214336
Query: 642 tgccttgtggaggagttgagaaaaaccaatg 672
|||||||||||||||||||||||||||||||
Sbjct: 116214337 tgccttgtggaggagttgagaaaaaccaatg 116214367
Score = 283 bits (143), Expect = 1e-73
Identities = 149/151 (98%)
Strand = Plus / Plus
Query: 522 ggaatcatcttcagcagtggaaagagatggaaggagacccggcgcttctccctcatgacc 581
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 116122258 ggaatcatcttcagcagtggaaagagatggaaggagatccggcgcttctccctcatgacc 116122317
Query: 582 ctgcggaattttgggatggggaagagaagcattgaggaacgggttcaagaggaagcccgc 641
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 116122318 ctgcggaattttgggatggggaagagaagcattgaggaacgcgttcaagaggaagcccgc 116122377
Query: 642 tgccttgtggaggagttgagaaaaaccaatg 672
|||||||||||||||||||||||||||||||
Sbjct: 116122378 tgccttgtggaggagttgagaaaaaccaatg 116122408
Score = 278 bits (140), Expect = 6e-72
Identities = 159/164 (96%), Gaps = 1/164 (0%)
Strand = Plus / Plus
Query: 672 gcttcaccctgtgatcccactttcctcctggg-ctgtgctccctgcaatgtgatctgctc 730
||||||||||| |||||||||||||||||||| ||||||||||||||| |||||||||||
Sbjct: 116126514 gcttcaccctgggatcccactttcctcctggggctgtgctccctgcaaagtgatctgctc 116126573
Query: 731 catcattttccacaatcgttttgattatacagatccaaattttcttaccttgttggaaaa 790
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 116126574 catcattttccgcaatcgttttgattatacagatccaaattttcttaccttgttggaaaa 116126633
Query: 791 actaaatgaaaacttcaggattctgagctccccgtggatccagg 834
| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 116126634 attaaatgaaaacttcaggattctgagctccccgtggatccagg 116126677
Score = 270 bits (136), Expect = 1e-69
Identities = 157/164 (95%)
Strand = Plus / Plus
Query: 360 ctctcaaaagtctatggccctgtattcaccgtgtattttggcttgaagcctgctgttgtg 419
|||||||||||||| |||||||||||||| |||||| |||||||||||||||| ||||||
Sbjct: 116121937 ctctcaaaagtctacggccctgtattcactgtgtatcttggcttgaagcctgccgttgtg 116121996
Query: 420 ttgcatggctatgaagcagtaaaagaagccctaattgatgggggagaggaattttctgga 479
|||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||
Sbjct: 116121997 ttgcatggctatgaagcaatgaaagaagccctaattgatgggggagaggaattttctgga 116122056
Query: 480 aggggccatttcccaatggctgagagagttaataaagggcatgg 523
||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 116122057 aggggccatctcccaatggctgagagagttaataaagggcatgg 116122100
Score = 262 bits (132), Expect = 4e-67
Identities = 156/164 (95%)
Strand = Plus / Plus
Query: 360 ctctcaaaagtctatggccctgtattcaccgtgtattttggcttgaagcctgctgttgtg 419
||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||
Sbjct: 115918706 ctctcaaaagtctatggccctgtattcacagtgtattttgacttgaagcctgctgttgtg 115918765
Query: 420 ttgcatggctatgaagcagtaaaagaagccctaattgatgggggagaggaattttctgga 479
|||||||||||||||||| | |||||||||||||||| || ||||||||| |||||||||
Sbjct: 115918766 ttgcatggctatgaagcaatgaaagaagccctaattgctgcgggagaggagttttctgga 115918825
Query: 480 aggggccatttcccaatggctgagagagttaataaagggcatgg 523
|||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 115918826 aggggccatttcccaatggctgagagagttaataaaggacatgg 115918869
Score = 262 bits (132), Expect = 4e-67
Identities = 156/164 (95%)
Strand = Plus / Plus
Query: 672 gcttcaccctgtgatcccactttcctcctgggctgtgctccctgcaatgtgatctgctcc 731
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 115923407 gcttcaccctgtgatcccactttcctcctgggctgtgctccctgcagtgtgatctgctcc 115923466
Query: 732 atcattttccacaatcgttttgattatacagatccaaattttcttaccttgttggaaaaa 791
|||||||||||||||||| ||||||||||| ||| ||||||||||||||||||||||||
Sbjct: 115923467 atcattttccacaatcgtgttgattatacaaatcagaattttcttaccttgttggaaaaa 115923526
Query: 792 ctaaatgaaaacttcaggattctgagctccccgtggatccaggt 835
| ||||||||||||||||||||||||||||||||||| |||||
Sbjct: 115923527 tttaatgaaaacttcaggattctgagctccccgtggatgcaggt 115923570
Score = 242 bits (122), Expect = 3e-61
Identities = 170/185 (91%), Gaps = 2/185 (1%)
Strand = Plus / Plus
Query: 832 aggtctgcaataatttccctgctctgattgactatctcccagggagtcataacaaagtgc 891
||||||||| ||||||||||||||||||||||||||||| || |||||||||||||||||
Sbjct: 115926852 aggtctgcagtaatttccctgctctgattgactatctccaagagagtcataacaaagtgc 115926911
Query: 892 ttaaaaattctgcttatgtaaaaagctatattttggagaaagtaaaagaacatcaagcat 951
||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 115926912 ttaaaaattctgcatatgtaaaaagctatattttggagaaagtaaaagaacatcaaacat 115926971
Query: 952 ccctggatgttaatgaccctcgggacttcattgattgttttctgatccaaatggaacagg 1011
||||||| ||||||||||| ||||||||| |||||||| |||||| | |||||| |||
Sbjct: 115926972 ccctggacattaatgacccttgggacttca--gattgtttcctgatcaagatggaagagg 115927029
Query: 1012 aaaaa 1016
||||
Sbjct: 115927030 taaaa 115927034
Score = 236 bits (119), Expect = 2e-59
Identities = 194/219 (88%)
Strand = Plus / Plus
Query: 140 aaaagctttagatttcaggctcccagttgtctaagtaagaagagagggcatcatggatgg 199
|||||||||||||||||||||| |||| ||||||||| ||||||||||||||||||||
Sbjct: 116190020 aaaagctttagatttcaggctcacagtggtctaagtaggaagagagggcatcatggatct 116190079
Query: 200 ggctgtggtcctggtgctctgtctctcctgtctgcttctcctctcactctggaaacagaa 259
|||||||| ||||||||| |||| | |||||||||||| || |||||||||| ||||
Sbjct: 116190080 ggctgtggccctggtgcttggtcttttctgtctgcttcttctgccactctggaatcagag 116190139
Query: 260 ctctgggaaggggaggctcccgcctggcccgactcctctctcaattcttggaaatatcct 319
||||||||| |||| |||||| |||||||| || ||||| |||||||||||||||||||
Sbjct: 116190140 ctctgggaaagggaagctcccacctggccccacctctctcccaattcttggaaatatcct 116190199
Query: 320 acagttagatgttaaggacatcagcaaatccttaagcaa 358
||||||| ||||||||| ||||||||||| |||||||||
Sbjct: 116190200 acagttatatgttaaggccatcagcaaatacttaagcaa 116190238
Score = 220 bits (111), Expect = 1e-54
Identities = 162/179 (90%)
Strand = Plus / Plus
Query: 181 gagagggcatcatggatggggctgtggtcctggtgctctgtctctcctgtctgcttctcc 240
|||| |||||||||||| || ||||||||||||||| |||||||||||||||||||||
Sbjct: 116299363 gagaaggcatcatggatctggttgtggtcctggtgcttagtctctcctgtctgcttctcc 116299422
Query: 241 tctcactctggaaacagaactctgggaaggggaggctcccgcctggcccgactcctctct 300
| |||||||||||| ||| ||||||||| ||| |||||| |||||||| |||||||||
Sbjct: 116299423 tttcactctggaaagagagctctgggaaaggggagctcccacctggccccactcctctcc 116299482
Query: 301 caattcttggaaatatcctacagttagatgttaaggacatcagcaaatccttaagcaac 359
||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||
Sbjct: 116299483 caattcttggaaatatcctacagttggatgttaagaacatcagcaaatccttaagcaac 116299541
Score = 204 bits (103), Expect = 7e-50
Identities = 187/214 (87%), Gaps = 2/214 (0%)
Strand = Plus / Plus
Query: 140 aaaagctttagatttcaggctcccagttgtctaagtaagaagagagggcatcatggatgg 199
|||||||||||||||||||||| ||||||| | |||||||||| |||||||||| |
Sbjct: 116158099 aaaagctttagatttcaggctcacagttgtatgtttaagaagagaaggcatcatgggtct 116158158
Query: 200 ggctgtggtcctggtgctctgtctctcctgtctgcttctcctctcactctggaaacagaa 259
|| |||||||||||||| |||||||||||||| ||||||||| |||||||||||||||
Sbjct: 116158159 ggttgtggtcctggtgccctgtctctcctgtc--cttctcctcccactctggaaacagag 116158216
Query: 260 ctctgggaaggggaggctcccgcctggcccgactcctctctcaattcttggaaatatcct 319
|||||||||||||| |||||| |||||||| ||||||||| |||||||||||| || ||
Sbjct: 116158217 ctctgggaaggggaagctcccacctggccccactcctctcccaattcttggaactagtct 116158276
Query: 320 acagttagatgttaaggacatcagcaaatcctta 353
| |||||||||||||| |||| |||| ||||||
Sbjct: 116158277 agagttagatgttaagaacattggcaagtcctta 116158310
Score = 204 bits (103), Expect = 7e-50
Identities = 187/214 (87%), Gaps = 2/214 (0%)
Strand = Plus / Plus
Query: 140 aaaagctttagatttcaggctcccagttgtctaagtaagaagagagggcatcatggatgg 199
|||||||||||||||||||||| ||||||| | |||||||||| |||||||||| |
Sbjct: 116254990 aaaagctttagatttcaggctcacagttgtatgtttaagaagagaaggcatcatgggtct 116255049
Query: 200 ggctgtggtcctggtgctctgtctctcctgtctgcttctcctctcactctggaaacagaa 259
|| |||||||||||||| |||||||||||||| ||||||||| |||||||||||||||
Sbjct: 116255050 ggttgtggtcctggtgccctgtctctcctgtc--cttctcctcccactctggaaacagag 116255107
Query: 260 ctctgggaaggggaggctcccgcctggcccgactcctctctcaattcttggaaatatcct 319
|||||||||||||| |||||| |||||||| ||||||||| |||||||||||| || ||
Sbjct: 116255108 ctctgggaaggggaagctcccacctggccccactcctctcccaattcttggaactagtct 116255167
Query: 320 acagttagatgttaaggacatcagcaaatcctta 353
| |||||||||||||| |||| |||| ||||||
Sbjct: 116255168 agagttagatgttaagaacattggcaagtcctta 116255201
Score = 192 bits (97), Expect = 3e-46
Identities = 145/161 (90%)
Strand = Plus / Plus
Query: 675 tcaccctgtgatcccactttcctcctgggctgtgctccctgcaatgtgatctgctccatc 734
|||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||
Sbjct: 116304751 tcaccctgtgatcccacttttatcctggactgtgctccctgcaatgtgatctgctccatt 116304810
Query: 735 attttccacaatcgttttgattatacagatccaaattttcttaccttgttggaaaaacta 794
|||||||| |||||||||||||||||||||| ||||||||||||||||||||||| |
Sbjct: 116304811 attttccaaaatcgttttgattatacagatcaggattttcttaccttgttggaaaaattc 116304870
Query: 795 aatgaaaacttcaggattctgagctccccgtggatccaggt 835
|||||||| ||| ||||||||||| || |||||||||||
Sbjct: 116304871 catgaaaacctcaatattctgagctctccatggatccaggt 116304911
Score = 188 bits (95), Expect = 4e-45
Identities = 137/151 (90%)
Strand = Plus / Plus
Query: 522 ggaatcatcttcagcagtggaaagagatggaaggagacccggcgcttctccctcatgacc 581
|||||||||||||||| |||||||| ||||||||| | ||||||||||||||||||||||
Sbjct: 116301400 ggaatcatcttcagcaatggaaagaaatggaaggaaatccggcgcttctccctcatgacc 116301459
Query: 582 ctgcggaattttgggatggggaagagaagcattgaggaacgggttcaagaggaagcccgc 641
|||||||||| ||||||||||| || ||||||||||| || |||| ||||||||| ||
Sbjct: 116301460 ttgcggaatttagggatggggaaaaggagcattgaggatcgcattcaggaggaagcctgc 116301519
Query: 642 tgccttgtggaggagttgagaaaaaccaatg 672
||||||||||||||||| |||||||||||||
Sbjct: 116301520 tgccttgtggaggagttaagaaaaaccaatg 116301550
Score = 165 bits (83), Expect = 6e-38
Identities = 134/151 (88%)
Strand = Plus / Plus
Query: 522 ggaatcatcttcagcagtggaaagagatggaaggagacccggcgcttctccctcatgacc 581
|||||||| || |||| |||||||||||||||| ||| | ||||||||||||||||||
Sbjct: 116191844 ggaatcatgtttagcaatggaaagagatggaagcagatctggcgcttctccctcatgatg 116191903
Query: 582 ctgcggaattttgggatggggaagagaagcattgaggaacgggttcaagaggaagcccgc 641
||| |||| || |||||||||||||| ||||||||||| | |||||||||||||||| |
Sbjct: 116191904 ctgtggaacttggggatggggaagaggagcattgaggacagagttcaagaggaagccctc 116191963
Query: 642 tgccttgtggaggagttgagaaaaaccaatg 672
|||||||||||||||||||||| ||||||||
Sbjct: 116191964 tgccttgtggaggagttgagaagaaccaatg 116191994
Score = 157 bits (79), Expect = 2e-35
Identities = 133/151 (88%), Gaps = 5/151 (3%)
Strand = Plus / Plus
Query: 522 ggaatcatcttcagcagtggaaagagatggaaggagacccggcgcttctccctcatgacc 581
|||||| ||||||||| |||||||| |||||||||||||||| |||| ||| ||||||||
Sbjct: 115919027 ggaatcctcttcagcaatggaaagatatggaaggagacccggtgcttttccatcatgacc 115919086
Query: 582 ctgcggaattttgggatggggaagagaagcattgaggaacgggttcaagaggaagcccgc 641
|||| |||||| |||||||| |||||||||||||| | ||||||||||||||| |
Sbjct: 115919087 ctgcagaatttcgggatggg-----gaagcattgaggaaagcattcaagaggaagccctc 115919141
Query: 642 tgccttgtggaggagttgagaaaaaccaatg 672
|||||||||||||||||||||| ||||||||
Sbjct: 115919142 tgccttgtggaggagttgagaagaaccaatg 115919172
Score = 127 bits (64), Expect = 1e-26
Identities = 151/180 (83%)
Strand = Plus / Plus
Query: 832 aggtctgcaataatttccctgctctgattgactatctcccagggagtcataacaaagtgc 891
||||||| ||||| ||||||||||| ||||| ||| ||||| | |||||||||| | |
Sbjct: 116306145 aggtctgtaataacttccctgctctcattgattattctccaggaattcataacaaattac 116306204
Query: 892 ttaaaaattctgcttatgtaaaaagctatattttggagaaagtaaaagaacatcaagcat 951
|||||||| ||||||| | ||||| ||| ||||| |||||||||||||||| |||| ||
Sbjct: 116306205 ttaaaaatattgcttatttgaaaagttatgttttgaagaaagtaaaagaacaccaagaat 116306264
Query: 952 ccctggatgttaatgaccctcgggacttcattgattgttttctgatccaaatggaacagg 1011
| ||||| |||| | ||||||||||||||||| ||||| |||||| ||||||||||||
Sbjct: 116306265 cactggacattaacaatcctcgggacttcattgactgtttcctgatcaaaatggaacagg 116306324
Score = 115 bits (58), Expect = 5e-23
Identities = 180/219 (82%), Gaps = 5/219 (2%)
Strand = Plus / Plus
Query: 122 tagcagggactgttataaaaaagctttagatttcaggctcccagttgtctaagtaagaag 181
|||||| ||||||||||||| |||||||||||||||||| ||||||||| |||||||
Sbjct: 115966730 tagcagagactgttataaaa--gctttagatttcaggctcacagttgtctgtttaagaag 115966787
Query: 182 agagggcatcatggatggggctgtggtcctggtgctctgtctctcctgtctgcttctcct 241
||| ||||||||| | || ||||||| ||||||| |||| | |||||||||||||||
Sbjct: 115966788 agaaggcatcatgagtctggttgtggtcttggtgcttggtcttttctgtctgcttctcct 115966847
Query: 242 ctcactctggaaacagaactctgggaaggggaggctcccgcctggcccgactcctctctc 301
| ||||||||||||| ||||||||| || | | | ||||||||| ||| |||| |
Sbjct: 115966848 cctgctctggaaacagagctctgggaa---gaagtttctgcctggccccacttttctccc 115966904
Query: 302 aattcttggaaatatcctacagttagatgttaaggacat 340
|||||||||||||| ||| | ||||| |||||| ||||
Sbjct: 115966905 aattcttggaaatagtctagaattagacgttaagaacat 115966943
Score = 115 bits (58), Expect = 5e-23
Identities = 94/106 (88%)
Strand = Plus / Plus
Query: 565 gcttctccctcatgaccctgcggaattttgggatggggaagagaagcattgaggaacggg 624
||||||||||||||| ||| ||||||| |||||||||||||| || |||||||| || |
Sbjct: 115975280 gcttctccctcatgatgctgaggaatttggggatggggaagaggagtattgaggaccgag 115975339
Query: 625 ttcaagaggaagcccgctgccttgtggaggagttgagaaaaaccaa 670
|||| ||||||| | |||||| ||||||||||||||||||||||||
Sbjct: 115975340 ttcaggaggaagtctgctgccatgtggaggagttgagaaaaaccaa 115975385
Score = 113 bits (57), Expect = 2e-22
Identities = 114/133 (85%)
Strand = Plus / Plus
Query: 367 aagtctatggccctgtattcaccgtgtattttggcttgaagcctgctgttgtgttgcatg 426
|||||||||||||||| |||||||||||||||||| | ||||| |||| ||||| |||
Sbjct: 116301064 aagtctatggccctgtgttcaccgtgtattttggcatcaagcccactgtggtgttatatg 116301123
Query: 427 gctatgaagcagtaaaagaagccctaattgatgggggagaggaattttctggaaggggcc 486
| ||||||||||| || ||||| || ||||| ||||||||| ||||||||||| ||||
Sbjct: 116301124 gatatgaagcagtgaaggaagctctggttgatctgggagaggagttttctggaagaggcc 116301183
Query: 487 atttcccaatggc 499
|||||||| ||||
Sbjct: 116301184 atttcccagtggc 116301196
Score = 111 bits (56), Expect = 8e-22
Identities = 95/108 (87%)
Strand = Plus / Plus
Query: 565 gcttctccctcatgaccctgcggaattttgggatggggaagagaagcattgaggaacggg 624
||||||||||||||| ||| || |||| |||||||||||||| | ||||||||| || |
Sbjct: 116166453 gcttctccctcatgatgctgaggcatttggggatggggaagaggaacattgaggaccgag 116166512
Query: 625 ttcaagaggaagcccgctgccttgtggaggagttgagaaaaaccaatg 672
|||| ||||||||| |||||| |||||||||||||||||||| |||||
Sbjct: 116166513 ttcaggaggaagcctgctgccatgtggaggagttgagaaaaatcaatg 116166560
Score = 111 bits (56), Expect = 8e-22
Identities = 95/108 (87%)
Strand = Plus / Plus
Query: 565 gcttctccctcatgaccctgcggaattttgggatggggaagagaagcattgaggaacggg 624
||||||||||||||| ||| || |||| |||||||||||||| | ||||||||| || |
Sbjct: 116265083 gcttctccctcatgatgctgaggcatttggggatggggaagaggaacattgaggaccgag 116265142
Query: 625 ttcaagaggaagcccgctgccttgtggaggagttgagaaaaaccaatg 672
|||| ||||||||| |||||| |||||||||||||||||||| |||||
Sbjct: 116265143 ttcaggaggaagcctgctgccatgtggaggagttgagaaaaatcaatg 116265190
Score = 97.6 bits (49), Expect = 1e-17
Identities = 121/145 (83%)
Strand = Plus / Plus
Query: 672 gcttcaccctgtgatcccactttcctcctgggctgtgctccctgcaatgtgatctgctcc 731
||||||||||||||||||||||| ||||| ||||||||||||||||| ||||| | |||
Sbjct: 116017584 gcttcaccctgtgatcccacttttatcctgagctgtgctccctgcaatatgatcagttcc 116017643
Query: 732 atcattttccacaatcgttttgattatacagatccaaattttcttaccttgttggaaaaa 791
|| |||| ||| || || |||||||||| ||||| | |||||| | | | ||||||||
Sbjct: 116017644 attatttaccagaaccgctttgattataaagatcagacttttctaaacctaatggaaaaa 116017703
Query: 792 ctaaatgaaaacttcaggattctga 816
| || |||||| ||||||||||||
Sbjct: 116017704 gtgaaggaaaacctcaggattctga 116017728
Score = 85.7 bits (43), Expect = 5e-14
Identities = 70/79 (88%)
Strand = Plus / Minus
Query: 561 cggcgcttctccctcatgaccctgcggaattttgggatggggaagagaagcattgaggaa 620
|||||||||||||||||||||||| |||| ||||||||||||||||| ||| | |||||
Sbjct: 120700674 cggcgcttctccctcatgaccctgaggaactttgggatggggaagaggagcctcgaggag 120700615
Query: 621 cgggttcaagaggaagccc 639
|||| || ||||||||||
Sbjct: 120700614 agggtccaggaggaagccc 120700596
Score = 85.7 bits (43), Expect = 5e-14
Identities = 70/79 (88%)
Strand = Plus / Plus
Query: 561 cggcgcttctccctcatgaccctgcggaattttgggatggggaagagaagcattgaggaa 620
|||||||||||||||||||||||| |||| ||||||||||||||||| ||| | |||||
Sbjct: 120814699 cggcgcttctccctcatgaccctgaggaactttgggatggggaagaggagcctcgaggag 120814758
Query: 621 cgggttcaagaggaagccc 639
|||| || ||||||||||
Sbjct: 120814759 agggtccaggaggaagccc 120814777
Score = 75.8 bits (38), Expect = 4e-11
Identities = 101/122 (82%)
Strand = Plus / Plus
Query: 360 ctctcaaaagtctatggccctgtattcaccgtgtattttggcttgaagcctgctgttgtg 419
||||||||| |||||||||| |||| ||| ||||||||||| ||||||| | || |||
Sbjct: 116191516 ctctcaaaaatctatggccccgtatacactctgtattttggcatgaagccagtggtggtg 116191575
Query: 420 ttgcatggctatgaagcagtaaaagaagccctaattgatgggggagaggaattttctgga 479
|| ||| ||||||||||| ||||||||||| ||| || |||||||| |||||||||
Sbjct: 116191576 ttctgtggatatgaagcagtgaaagaagccctgattcatcttggagaggagttttctgga 116191635
Query: 480 ag 481
||
Sbjct: 116191636 ag 116191637
Score = 61.9 bits (31), Expect = 7e-07
Identities = 31/31 (100%)
Strand = Plus / Minus
Query: 704 ctgtgctccctgcaatgtgatctgctccatc 734
|||||||||||||||||||||||||||||||
Sbjct: 120699899 ctgtgctccctgcaatgtgatctgctccatc 120699869
Score = 61.9 bits (31), Expect = 7e-07
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 704 ctgtgctccctgcaatgtgatctgctccatc 734
|||||||||||||||||||||||||||||||
Sbjct: 120815474 ctgtgctccctgcaatgtgatctgctccatc 120815504
>gb|GL896193.2| Sus scrofa unplaced genomic scaffold ChrUScaf4077
Length = 16514
Score = 262 bits (132), Expect = 4e-67
Identities = 156/164 (95%)
Strand = Plus / Plus
Query: 672 gcttcaccctgtgatcccactttcctcctgggctgtgctccctgcaatgtgatctgctcc 731
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 13843 gcttcaccctgtgatcccactttcctcctgagctgtgctccctgcaatgtgatctgctcc 13902
Query: 732 atcattttccacaatcgttttgattatacagatccaaattttcttaccttgttggaaaaa 791
|||||||||| ||||||||||||||||||||||||||||||||||||||| |||| ||||
Sbjct: 13903 atcattttccgcaatcgttttgattatacagatccaaattttcttaccttcttgggaaaa 13962
Query: 792 ctaaatgaaaacttcaggattctgagctccccgtggatccaggt 835
| |||||||||||||||||||||| ||||| ||||||||||||
Sbjct: 13963 tttaatgaaaacttcaggattctgaactccctgtggatccaggt 14006
Score = 228 bits (115), Expect = 5e-57
Identities = 136/143 (95%)
Strand = Plus / Plus
Query: 836 ctgcaataatttccctgctctgattgactatctcccagggagtcataacaaagtgcttaa 895
|||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||
Sbjct: 15471 ctgcaataatttccctgccctgattgactatctcccagggagtcataacaaagtgtttaa 15530
Query: 896 aaattctgcttatgtaaaaagctatattttggagaaagtaaaagaacatcaagcatccct 955
||||| ||| || ||||||||||||||||||||||||||||| |||||||||||||| ||
Sbjct: 15531 aaattttgcatacgtaaaaagctatattttggagaaagtaaaggaacatcaagcatctct 15590
Query: 956 ggatgttaatgaccctcgggact 978
|||||||||||||||||||||||
Sbjct: 15591 ggatgttaatgaccctcgggact 15613
Score = 163 bits (82), Expect = 2e-37
Identities = 179/209 (85%), Gaps = 3/209 (1%)
Strand = Plus / Plus
Query: 9 agagcaaagaacaccacagtttaatcttcatcacagggccaaggtcccttcaaaagagat 68
||||| |||||||||| |||||| || |||| ||||||| ||||||||||| || ||
Sbjct: 5032 agagctaagaacaccatgttttaatatttatcaaggggccaaagtcccttcaaa-gacat 5090
Query: 69 taaagtagacctagctaattgttcactttatgagtcagagagtcagaagttattagcagg 128
|||||||||| | ||| ||| |||||||||||||||| ||||| | |||| |||||||||
Sbjct: 5091 taaagtagacttggctcattattcactttatgagtcaaagagtgacaagtaattagcagg 5150
Query: 129 gactgttataaaaaagctttagatttcaggctcccagttgtctaagtaagaagagagggc 188
||||||||| |||||||||||||||||||||| ||||||||||| |||||||| | |||
Sbjct: 5151 gactgttat--aaaagctttagatttcaggctcacagttgtctaactaagaagacaaggc 5208
Query: 189 atcatggatggggctgtggtcctggtgct 217
||||||| | | |||||||||||||||
Sbjct: 5209 atcatgggtctagttgtggtcctggtgct 5237
Score = 121 bits (61), Expect = 8e-25
Identities = 88/97 (90%)
Strand = Plus / Plus
Query: 360 ctctcaaaagtctatggccctgtattcaccgtgtattttggcttgaagcctgctgttgtg 419
||||||||||| ||||||||||| | ||||||||| |||||||| ||||||||||||||
Sbjct: 11572 ctctcaaaagtttatggccctgtgtataccgtgtatcttggcttggagcctgctgttgtg 11631
Query: 420 ttgcatggctatgaagcagtaaaagaagccctaattg 456
|||||||||||||||| | | ||||||||||||||||
Sbjct: 11632 ttgcatggctatgaagtaatgaaagaagccctaattg 11668
Score = 107 bits (54), Expect = 1e-20
Identities = 63/66 (95%)
Strand = Plus / Plus
Query: 598 tggggaagagaagcattgaggaacgggttcaagaggaagcccgctgccttgtggaggagt 657
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 11779 tggggaagagaagcattgaggaacacattcaagaggaagcccgctgccttgtggaggagt 11838
Query: 658 tgagaa 663
||||||
Sbjct: 11839 tgagaa 11844
Database: Sscrofa_10.2.fasta
Posted date: Nov 16, 2011 10:34 AM
Number of letters in database: 2,808,509,378
Number of sequences in database: 4582
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4582
Number of Hits to DB: 39,686,380
Number of extensions: 362
Number of successful extensions: 362
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 353
Number of HSP's successfully gapped: 39
Length of query: 1082
Length of database: 2,808,509,378
Length adjustment: 21
Effective length of query: 1061
Effective length of database: 2,808,413,156
Effective search space: 2979726358516
Effective search space used: 2979726358516
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 18 (36.2 bits)
S2: 30 (60.0 bits)