Search to RefSeqCP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-014046
(1014 letters)
Database: RefSeq49_CP.fasta
33,336 sequences; 18,874,504 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_849377.1| PREDICTED: similar to Transcription factor-like... 452 e-127
Alignment gi|XP_858649.1| PREDICTED: similar to Transcription factor-like... 388 e-108
Alignment gi|XP_546925.2| PREDICTED: similar to Williams Beuren syndrome ... 94 3e-19
Alignment gi|XP_859822.1| PREDICTED: similar to MondoA isoform 3 [Canis f... 89 5e-18
Alignment gi|XP_849805.1| PREDICTED: similar to MondoA isoform 2 [Canis f... 89 5e-18
Alignment gi|XP_857605.1| PREDICTED: similar to Williams Beuren syndrome ... 66 5e-11
Alignment gi|XP_534662.2| PREDICTED: similar to MondoA isoform 1 [Canis f... 59 6e-09
Alignment gi|NP_001002953.1| hairy/enhancer-of-split related with YRPW mo... 50 3e-06
Alignment gi|XP_866469.1| PREDICTED: similar to MAX protein isoform a iso... 50 4e-06
>ref|XP_849377.1| PREDICTED: similar to Transcription factor-like protein 4 (Max-like
bHLHZip protein) (BigMax protein) (Mlx) isoform 1 [Canis
familiaris].
Length = 298
Score = 452 bits (1164), Expect = e-127
Identities = 227/231 (98%), Positives = 229/231 (99%)
Frame = +1
Query: 67 KVEYAYSDNSLDPGIFVESTRKGSVVSRANSIGSTSASSVPNTDDEDSDYHQESYKESYK 246
KVEYAYSDNSLDPG+FVE+TRKGSVVSRANSIGSTSASSVPNTDDEDSDYHQESYKESYK
Sbjct: 68 KVEYAYSDNSLDPGLFVENTRKGSVVSRANSIGSTSASSVPNTDDEDSDYHQESYKESYK 127
Query: 247 DRRRRAHTQAEQKRRDAIKRGYDDLQTIVPTCQQQDFSIGSQKLSKAIVLQKTIDYIQFL 426
DRRRRAHTQAEQKRRDAIKRGYDDLQTIVPTCQQQDFSIGSQKLSKAIVLQKTIDYIQFL
Sbjct: 128 DRRRRAHTQAEQKRRDAIKRGYDDLQTIVPTCQQQDFSIGSQKLSKAIVLQKTIDYIQFL 187
Query: 427 HKEKKKQEEEVSTLRKDVMALKIMKVNYEQIVKAHQDNPHEGEDQVSDQVKFNVFQGIMD 606
HKEKKKQEEEVS LRKDV ALKIMKVNYEQIVKAHQDNPHEGEDQVSDQVKFNVFQGIMD
Sbjct: 188 HKEKKKQEEEVSMLRKDVTALKIMKVNYEQIVKAHQDNPHEGEDQVSDQVKFNVFQGIMD 247
Query: 607 SLFQSFNASISVASFQELSACVFSWIEEHCKPQTLREIVIGVLHQLKNQLY 759
SLFQSFNASISVASFQELSACVFSWIEEHCKPQTLREIVIGVLHQLKNQLY
Sbjct: 248 SLFQSFNASISVASFQELSACVFSWIEEHCKPQTLREIVIGVLHQLKNQLY 298
>ref|XP_858649.1| PREDICTED: similar to Transcription factor-like protein 4 (Max-like
bHLHZip protein) (BigMax protein) (Mlx) isoform 2 [Canis
familiaris].
Length = 268
Score = 388 bits (997), Expect = e-108
Identities = 208/270 (77%), Positives = 215/270 (79%), Gaps = 26/270 (9%)
Frame = +1
Query: 28 MTEPGASPEDPWVKVEYAYSDNSLDPGIFVESTRKGSVVSRANSI------------GST 171
MTEPGASP+DPWVK A + G + +G R +S+ G
Sbjct: 1 MTEPGASPDDPWVKASPAGA--HAGEGRAGRARARGGAGRRGDSLQSPKVPPPFGPRGCR 58
Query: 172 SASSVP--------------NTDDEDSDYHQESYKESYKDRRRRAHTQAEQKRRDAIKRG 309
SS P + DDEDSDYHQESYKESYKDRRRRAHTQAEQKRRDAIKRG
Sbjct: 59 EDSSHPARAKVEYAYSDNSLDPDDEDSDYHQESYKESYKDRRRRAHTQAEQKRRDAIKRG 118
Query: 310 YDDLQTIVPTCQQQDFSIGSQKLSKAIVLQKTIDYIQFLHKEKKKQEEEVSTLRKDVMAL 489
YDDLQTIVPTCQQQDFSIGSQKLSKAIVLQKTIDYIQFLHKEKKKQEEEVS LRKDV AL
Sbjct: 119 YDDLQTIVPTCQQQDFSIGSQKLSKAIVLQKTIDYIQFLHKEKKKQEEEVSMLRKDVTAL 178
Query: 490 KIMKVNYEQIVKAHQDNPHEGEDQVSDQVKFNVFQGIMDSLFQSFNASISVASFQELSAC 669
KIMKVNYEQIVKAHQDNPHEGEDQVSDQVKFNVFQGIMDSLFQSFNASISVASFQELSAC
Sbjct: 179 KIMKVNYEQIVKAHQDNPHEGEDQVSDQVKFNVFQGIMDSLFQSFNASISVASFQELSAC 238
Query: 670 VFSWIEEHCKPQTLREIVIGVLHQLKNQLY 759
VFSWIEEHCKPQTLREIVIGVLHQLKNQLY
Sbjct: 239 VFSWIEEHCKPQTLREIVIGVLHQLKNQLY 268
>ref|XP_546925.2| PREDICTED: similar to Williams Beuren syndrome chromosome region 14
isoform alpha isoform 1 [Canis familiaris].
Length = 857
Score = 93.6 bits (231), Expect = 3e-19
Identities = 62/179 (34%), Positives = 87/179 (48%), Gaps = 13/179 (7%)
Frame = +1
Query: 247 DRRRRAHTQAEQKRRDAIKRGYDDLQTIVPTCQQQDFSIGSQKLSKAIVLQKTIDYIQFL 426
+ RR H AEQKRR IK G+D L +V T Q S K+SKA LQKT +YI L
Sbjct: 653 ENRRITHISAEQKRRFNIKLGFDTLHGLVSTLSAQP----SLKVSKATTLQKTAEYIAML 708
Query: 427 HKEKKKQEEEVSTLRKDVMALKI-MKVNYEQIVKAHQDNPHEGEDQVSDQV--------- 576
+E+ +EE LR + L + + +Q+ H+ DQ+ D
Sbjct: 709 QQERAAMQEEAQQLRDQIEELNAAINLCQQQLPATGVPITHQRFDQMRDMFDDYVRTRTL 768
Query: 577 ---KFNVFQGIMDSLFQSFNASISVASFQELSACVFSWIEEHCKPQTLREIVIGVLHQL 744
KF VF ++ LF+SFN +S AS Q L +W++++C LR V+ L QL
Sbjct: 769 HNWKFWVFSILIRPLFESFNGMVSTASLQSLRQTSLAWLDQYCSLPALRPTVLNSLRQL 827
>ref|XP_859822.1| PREDICTED: similar to MondoA isoform 3 [Canis familiaris].
Length = 916
Score = 89.4 bits (220), Expect = 5e-18
Identities = 58/177 (32%), Positives = 90/177 (50%), Gaps = 13/177 (7%)
Frame = +1
Query: 253 RRRAHTQAEQKRRDAIKRGYDDLQTIVPTCQQQDFSIGSQKLSKAIVLQKTIDYIQFLHK 432
R+ H AEQKRR IK G+D L +++ S S+ S AI LQKT++YI L +
Sbjct: 717 RQMKHISAEQKRRFNIKMGFDTLNSLI--------SNNSKLTSHAITLQKTVEYITKLQQ 768
Query: 433 EKKKQEEEVSTLRKDVMALKIMKVNYEQIVKA-------HQ-DNPHEGEDQ-----VSDQ 573
E+ + +EE LR+++ L ++ +Q++ A HQ D+ + D+
Sbjct: 769 ERSQMQEEARRLREEIEELNATIISCQQLLPATGVPVTRHQFDHMRDMFDEYVKSRTLQN 828
Query: 574 VKFNVFQGIMDSLFQSFNASISVASFQELSACVFSWIEEHCKPQTLREIVIGVLHQL 744
KF +F I+ LF+SF +S +S EL SW+++HC LR V+ L L
Sbjct: 829 WKFWIFSIIIKPLFESFKGMVSTSSLGELHRTALSWLDQHCSLPVLRPTVLNTLRHL 885
>ref|XP_849805.1| PREDICTED: similar to MondoA isoform 2 [Canis familiaris].
Length = 923
Score = 89.4 bits (220), Expect = 5e-18
Identities = 58/177 (32%), Positives = 90/177 (50%), Gaps = 13/177 (7%)
Frame = +1
Query: 253 RRRAHTQAEQKRRDAIKRGYDDLQTIVPTCQQQDFSIGSQKLSKAIVLQKTIDYIQFLHK 432
R+ H AEQKRR IK G+D L +++ S S+ S AI LQKT++YI L +
Sbjct: 724 RQMKHISAEQKRRFNIKMGFDTLNSLI--------SNNSKLTSHAITLQKTVEYITKLQQ 775
Query: 433 EKKKQEEEVSTLRKDVMALKIMKVNYEQIVKA-------HQ-DNPHEGEDQ-----VSDQ 573
E+ + +EE LR+++ L ++ +Q++ A HQ D+ + D+
Sbjct: 776 ERSQMQEEARRLREEIEELNATIISCQQLLPATGVPVTRHQFDHMRDMFDEYVKSRTLQN 835
Query: 574 VKFNVFQGIMDSLFQSFNASISVASFQELSACVFSWIEEHCKPQTLREIVIGVLHQL 744
KF +F I+ LF+SF +S +S EL SW+++HC LR V+ L L
Sbjct: 836 WKFWIFSIIIKPLFESFKGMVSTSSLGELHRTALSWLDQHCSLPVLRPTVLNTLRHL 892
>ref|XP_857605.1| PREDICTED: similar to Williams Beuren syndrome chromosome region 14
isoform beta isoform 5 [Canis familiaris].
Length = 839
Score = 66.2 bits (160), Expect = 5e-11
Identities = 51/179 (28%), Positives = 74/179 (41%), Gaps = 13/179 (7%)
Frame = +1
Query: 247 DRRRRAHTQAEQKRRDAIKRGYDDLQTIVPTCQQQDFSIGSQKLSKAIVLQKTIDYIQFL 426
+ RR H AEQKRR IK G+D L +V T Q L
Sbjct: 653 ENRRITHISAEQKRRFNIKLGFDTLHGLVSTLSAQPS----------------------L 690
Query: 427 HKEKKKQEEEVSTLRKDVMALKI-MKVNYEQIVKAHQDNPHEGEDQVSDQV--------- 576
+E+ +EE LR + L + + +Q+ H+ DQ+ D
Sbjct: 691 KQERAAMQEEAQQLRDQIEELNAAINLCQQQLPATGVPITHQRFDQMRDMFDDYVRTRTL 750
Query: 577 ---KFNVFQGIMDSLFQSFNASISVASFQELSACVFSWIEEHCKPQTLREIVIGVLHQL 744
KF VF ++ LF+SFN +S AS Q L +W++++C LR V+ L QL
Sbjct: 751 HNWKFWVFSILIRPLFESFNGMVSTASLQSLRQTSLAWLDQYCSLPALRPTVLNSLRQL 809
>ref|XP_534662.2| PREDICTED: similar to MondoA isoform 1 [Canis familiaris].
Length = 863
Score = 59.3 bits (142), Expect = 6e-09
Identities = 33/92 (35%), Positives = 53/92 (57%)
Frame = +1
Query: 253 RRRAHTQAEQKRRDAIKRGYDDLQTIVPTCQQQDFSIGSQKLSKAIVLQKTIDYIQFLHK 432
R+ H AEQKRR IK G+D L +++ S S+ S AI LQKT++YI L +
Sbjct: 724 RQMKHISAEQKRRFNIKMGFDTLNSLI--------SNNSKLTSHAITLQKTVEYITKLQQ 775
Query: 433 EKKKQEEEVSTLRKDVMALKIMKVNYEQIVKA 528
E+ + +EE LR+++ L ++ +Q++ A
Sbjct: 776 ERSQMQEEARRLREEIEELNATIISCQQLLPA 807
>ref|NP_001002953.1| hairy/enhancer-of-split related with YRPW motif protein 1 [Canis
lupus familiaris].
Length = 304
Score = 50.4 bits (119), Expect = 3e-06
Identities = 38/142 (26%), Positives = 65/142 (45%), Gaps = 3/142 (2%)
Frame = +1
Query: 73 EYAYSDNSLDPGIFVE---STRKGSVVSRANSIGSTSASSVPNTDDEDSDYHQESYKESY 243
+Y+ SD+ LD + VE + G++ S S+ T++S +
Sbjct: 7 DYSSSDSELDETVEVEKESADENGNLSSALGSMSPTTSSQIL------------------ 48
Query: 244 KDRRRRAHTQAEQKRRDAIKRGYDDLQTIVPTCQQQDFSIGSQKLSKAIVLQKTIDYIQF 423
R+R E++RRD I +L+ +VP+ ++ GS KL KA +LQ T+D+++
Sbjct: 49 --ARKRRRGIIEKRRRDRINNSLSELRRLVPSAFEKQ---GSAKLEKAEILQMTVDHLKM 103
Query: 424 LHKEKKKQEEEVSTLRKDVMAL 489
LH K + L D +L
Sbjct: 104 LHTAGGKGYFDAHALAMDYRSL 125
>ref|XP_866469.1| PREDICTED: similar to MAX protein isoform a isoform 6 [Canis
familiaris].
Length = 165
Score = 49.7 bits (117), Expect = 4e-06
Identities = 25/95 (26%), Positives = 52/95 (54%)
Frame = +1
Query: 190 NTDDEDSDYHQESYKESYKDRRRRAHTQAEQKRRDAIKRGYDDLQTIVPTCQQQDFSIGS 369
+ DD + + +E + +R H E+KRRD IK + L+ VP+ Q + S+
Sbjct: 3 DNDDIEVESDEEQPRFQSAADKRAHHNALERKRRDHIKDSFHSLRDSVPSLQGEKVSL-- 60
Query: 370 QKLSKAIVLQKTIDYIQFLHKEKKKQEEEVSTLRK 474
++ S+A +L K +YIQ++ ++ ++++ L++
Sbjct: 61 KEASRAQILDKATEYIQYMRRKNHTHQQDIDDLKR 95
Database: RefSeq49_CP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,874,504
Number of sequences in database: 33,336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33336
Number of Hits to DB: 43,218,144
Number of extensions: 1306310
Number of successful extensions: 5344
Number of sequences better than 1.0e-05: 9
Number of HSP's gapped: 5310
Number of HSP's successfully gapped: 9
Length of query: 338
Length of database: 18,874,504
Length adjustment: 103
Effective length of query: 235
Effective length of database: 15,440,896
Effective search space: 3628610560
Effective search space used: 3628610560
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)
Animal-Genome cDNA 20110601C-014046
Search to RefSeqBP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-014046
(1014 letters)
Database: RefSeq49_BP.fasta
33,088 sequences; 17,681,374 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_001253487.1| PREDICTED: transcription factor-like protein... 487 e-138
Alignment gi|NP_001030233.1| MAX-like protein X [Bos taurus]. 484 e-137
Alignment gi|XP_001253470.1| PREDICTED: transcription factor-like protein... 457 e-129
Alignment gi|XP_002703264.1| PREDICTED: transcription factor-like protein... 417 e-117
Alignment gi|NP_001192337.1| Williams-Beuren syndrome chromosomal region ... 94 1e-19
Alignment gi|NP_001192365.1| MLX-interacting protein [Bos taurus]. 87 2e-17
Alignment gi|XP_002694618.1| PREDICTED: MondoA-like, partial [Bos taurus]. 87 2e-17
Alignment gi|NP_001001172.2| hairy/enhancer-of-split related with YRPW mo... 50 2e-06
Alignment gi|NP_001099103.1| protein max [Bos taurus]. 49 9e-06
>ref|XP_001253487.1| PREDICTED: transcription factor-like protein 4 isoform 2 [Bos
taurus].
Length = 244
Score = 487 bits (1253), Expect = e-138
Identities = 242/244 (99%), Positives = 244/244 (100%)
Frame = +1
Query: 28 MTEPGASPEDPWVKVEYAYSDNSLDPGIFVESTRKGSVVSRANSIGSTSASSVPNTDDED 207
MTEPGASPEDPWVKVEYAYSDNSLDPG+FVESTRKGSVVSRANSIGSTSASSVPNTDDED
Sbjct: 1 MTEPGASPEDPWVKVEYAYSDNSLDPGLFVESTRKGSVVSRANSIGSTSASSVPNTDDED 60
Query: 208 SDYHQESYKESYKDRRRRAHTQAEQKRRDAIKRGYDDLQTIVPTCQQQDFSIGSQKLSKA 387
SDYHQESYKESYKDRRRRAHTQAEQKRRDAIKRGYDDLQTIVPTCQQQDFS+GSQKLSKA
Sbjct: 61 SDYHQESYKESYKDRRRRAHTQAEQKRRDAIKRGYDDLQTIVPTCQQQDFSLGSQKLSKA 120
Query: 388 IVLQKTIDYIQFLHKEKKKQEEEVSTLRKDVMALKIMKVNYEQIVKAHQDNPHEGEDQVS 567
IVLQKTIDYIQFLHKEKKKQEEEVSTLRKDVMALKIMKVNYEQIVKAHQDNPHEGEDQVS
Sbjct: 121 IVLQKTIDYIQFLHKEKKKQEEEVSTLRKDVMALKIMKVNYEQIVKAHQDNPHEGEDQVS 180
Query: 568 DQVKFNVFQGIMDSLFQSFNASISVASFQELSACVFSWIEEHCKPQTLREIVIGVLHQLK 747
DQVKFNVFQGIMDSLFQSFNASISVASFQELSACVFSWIEEHCKPQTLREIVIGVLHQLK
Sbjct: 181 DQVKFNVFQGIMDSLFQSFNASISVASFQELSACVFSWIEEHCKPQTLREIVIGVLHQLK 240
Query: 748 NQLY 759
NQLY
Sbjct: 241 NQLY 244
>ref|NP_001030233.1| MAX-like protein X [Bos taurus].
Length = 244
Score = 484 bits (1245), Expect = e-137
Identities = 240/244 (98%), Positives = 242/244 (99%)
Frame = +1
Query: 28 MTEPGASPEDPWVKVEYAYSDNSLDPGIFVESTRKGSVVSRANSIGSTSASSVPNTDDED 207
MTEPGASPEDPWVKVEYAYSDNSLDPG+FVESTRKGSVVSRAN IGSTSASSVPNTDDED
Sbjct: 1 MTEPGASPEDPWVKVEYAYSDNSLDPGLFVESTRKGSVVSRANGIGSTSASSVPNTDDED 60
Query: 208 SDYHQESYKESYKDRRRRAHTQAEQKRRDAIKRGYDDLQTIVPTCQQQDFSIGSQKLSKA 387
SDYHQESYKESYKDRRRRAHTQ EQKRRDAIKRGYDDLQTIVPTCQQQDFS+GSQKLSKA
Sbjct: 61 SDYHQESYKESYKDRRRRAHTQVEQKRRDAIKRGYDDLQTIVPTCQQQDFSLGSQKLSKA 120
Query: 388 IVLQKTIDYIQFLHKEKKKQEEEVSTLRKDVMALKIMKVNYEQIVKAHQDNPHEGEDQVS 567
IVLQKTIDYIQFLHKEKKKQEEEVSTLRKDVMALKIMKVNYEQIVKAHQDNPHEGEDQVS
Sbjct: 121 IVLQKTIDYIQFLHKEKKKQEEEVSTLRKDVMALKIMKVNYEQIVKAHQDNPHEGEDQVS 180
Query: 568 DQVKFNVFQGIMDSLFQSFNASISVASFQELSACVFSWIEEHCKPQTLREIVIGVLHQLK 747
DQVKFNVFQGIMDSLFQSFNASISVASFQELSACVFSWIEEHCKPQTLREIVIGVLHQLK
Sbjct: 181 DQVKFNVFQGIMDSLFQSFNASISVASFQELSACVFSWIEEHCKPQTLREIVIGVLHQLK 240
Query: 748 NQLY 759
NQLY
Sbjct: 241 NQLY 244
>ref|XP_001253470.1| PREDICTED: transcription factor-like protein 4 isoform 1 [Bos
taurus].
Length = 298
Score = 457 bits (1177), Expect = e-129
Identities = 229/231 (99%), Positives = 231/231 (100%)
Frame = +1
Query: 67 KVEYAYSDNSLDPGIFVESTRKGSVVSRANSIGSTSASSVPNTDDEDSDYHQESYKESYK 246
KVEYAYSDNSLDPG+FVESTRKGSVVSRANSIGSTSASSVPNTDDEDSDYHQESYKESYK
Sbjct: 68 KVEYAYSDNSLDPGLFVESTRKGSVVSRANSIGSTSASSVPNTDDEDSDYHQESYKESYK 127
Query: 247 DRRRRAHTQAEQKRRDAIKRGYDDLQTIVPTCQQQDFSIGSQKLSKAIVLQKTIDYIQFL 426
DRRRRAHTQAEQKRRDAIKRGYDDLQTIVPTCQQQDFS+GSQKLSKAIVLQKTIDYIQFL
Sbjct: 128 DRRRRAHTQAEQKRRDAIKRGYDDLQTIVPTCQQQDFSLGSQKLSKAIVLQKTIDYIQFL 187
Query: 427 HKEKKKQEEEVSTLRKDVMALKIMKVNYEQIVKAHQDNPHEGEDQVSDQVKFNVFQGIMD 606
HKEKKKQEEEVSTLRKDVMALKIMKVNYEQIVKAHQDNPHEGEDQVSDQVKFNVFQGIMD
Sbjct: 188 HKEKKKQEEEVSTLRKDVMALKIMKVNYEQIVKAHQDNPHEGEDQVSDQVKFNVFQGIMD 247
Query: 607 SLFQSFNASISVASFQELSACVFSWIEEHCKPQTLREIVIGVLHQLKNQLY 759
SLFQSFNASISVASFQELSACVFSWIEEHCKPQTLREIVIGVLHQLKNQLY
Sbjct: 248 SLFQSFNASISVASFQELSACVFSWIEEHCKPQTLREIVIGVLHQLKNQLY 298
>ref|XP_002703264.1| PREDICTED: transcription factor-like protein 4 [Bos taurus].
Length = 214
Score = 417 bits (1072), Expect = e-117
Identities = 213/244 (87%), Positives = 214/244 (87%)
Frame = +1
Query: 28 MTEPGASPEDPWVKVEYAYSDNSLDPGIFVESTRKGSVVSRANSIGSTSASSVPNTDDED 207
MTEPGASPEDPWVKVEYAYSDNSLDP DDED
Sbjct: 1 MTEPGASPEDPWVKVEYAYSDNSLDP------------------------------DDED 30
Query: 208 SDYHQESYKESYKDRRRRAHTQAEQKRRDAIKRGYDDLQTIVPTCQQQDFSIGSQKLSKA 387
SDYHQESYKESYKDRRRRAHTQAEQKRRDAIKRGYDDLQTIVPTCQQQDFS+GSQKLSKA
Sbjct: 31 SDYHQESYKESYKDRRRRAHTQAEQKRRDAIKRGYDDLQTIVPTCQQQDFSLGSQKLSKA 90
Query: 388 IVLQKTIDYIQFLHKEKKKQEEEVSTLRKDVMALKIMKVNYEQIVKAHQDNPHEGEDQVS 567
IVLQKTIDYIQFLHKEKKKQEEEVSTLRKDVMALKIMKVNYEQIVKAHQDNPHEGEDQVS
Sbjct: 91 IVLQKTIDYIQFLHKEKKKQEEEVSTLRKDVMALKIMKVNYEQIVKAHQDNPHEGEDQVS 150
Query: 568 DQVKFNVFQGIMDSLFQSFNASISVASFQELSACVFSWIEEHCKPQTLREIVIGVLHQLK 747
DQVKFNVFQGIMDSLFQSFNASISVASFQELSACVFSWIEEHCKPQTLREIVIGVLHQLK
Sbjct: 151 DQVKFNVFQGIMDSLFQSFNASISVASFQELSACVFSWIEEHCKPQTLREIVIGVLHQLK 210
Query: 748 NQLY 759
NQLY
Sbjct: 211 NQLY 214
>ref|NP_001192337.1| Williams-Beuren syndrome chromosomal region 14 protein [Bos taurus].
Length = 856
Score = 94.4 bits (233), Expect = 1e-19
Identities = 62/183 (33%), Positives = 90/183 (49%), Gaps = 13/183 (7%)
Frame = +1
Query: 235 ESYKDRRRRAHTQAEQKRRDAIKRGYDDLQTIVPTCQQQDFSIGSQKLSKAIVLQKTIDY 414
+S + RR H AEQKRR IK G+D L +V T Q + K+SKA LQKT +Y
Sbjct: 648 DSKTENRRITHISAEQKRRFNIKLGFDTLHGLVSTLSTQP----NLKMSKATTLQKTAEY 703
Query: 415 IQFLHKEKKKQEEEVSTLRKDVMALKI-MKVNYEQIVKAHQDNPHEGEDQVSDQV----- 576
I L +E+ ++EE LR + L + + +Q+ H+ DQ+ D
Sbjct: 704 IAMLQQERAAKQEEAQQLRDQIEELNAAINLCQQQLPATGVPITHQRFDQMRDMFDDYVR 763
Query: 577 -------KFNVFQGIMDSLFQSFNASISVASFQELSACVFSWIEEHCKPQTLREIVIGVL 735
KF VF ++ LF+SFN +S AS Q L +W++++C LR V+ L
Sbjct: 764 TRTLHNWKFWVFSILIRPLFESFNGMVSTASLQSLRQTSLAWLDQYCSLPALRPTVLNSL 823
Query: 736 HQL 744
QL
Sbjct: 824 RQL 826
>ref|NP_001192365.1| MLX-interacting protein [Bos taurus].
Length = 927
Score = 87.0 bits (214), Expect = 2e-17
Identities = 55/177 (31%), Positives = 88/177 (49%), Gaps = 13/177 (7%)
Frame = +1
Query: 253 RRRAHTQAEQKRRDAIKRGYDDLQTIVPTCQQQDFSIGSQKLSKAIVLQKTIDYIQFLHK 432
R+ H AEQKRR IK G+D L +++ S ++ S AI LQKT++YI L +
Sbjct: 728 RQMKHISAEQKRRFNIKMGFDTLNSLI--------SNNTKLTSHAITLQKTVEYITKLQQ 779
Query: 433 EKKKQEEEVSTLRKDVMALKIMKVNYEQIVKA-----------HQDNPHEG--EDQVSDQ 573
E+ + +EE LR+++ L ++ +Q++ A H + + + +
Sbjct: 780 ERSQMQEEARRLREEIEELNATILSCQQLLPATGVPVTRRQFDHMRDMFDEYVKSRTLQN 839
Query: 574 VKFNVFQGIMDSLFQSFNASISVASFQELSACVFSWIEEHCKPQTLREIVIGVLHQL 744
KF +F I+ LF+SF +S +S EL SW++EHC LR V+ L L
Sbjct: 840 WKFWIFSVIIKPLFESFKGVVSTSSLDELHRTALSWLDEHCSLPILRPTVLNTLRHL 896
>ref|XP_002694618.1| PREDICTED: MondoA-like, partial [Bos taurus].
Length = 856
Score = 87.0 bits (214), Expect = 2e-17
Identities = 55/177 (31%), Positives = 88/177 (49%), Gaps = 13/177 (7%)
Frame = +1
Query: 253 RRRAHTQAEQKRRDAIKRGYDDLQTIVPTCQQQDFSIGSQKLSKAIVLQKTIDYIQFLHK 432
R+ H AEQKRR IK G+D L +++ S ++ S AI LQKT++YI L +
Sbjct: 657 RQMKHISAEQKRRFNIKMGFDTLNSLI--------SNNTKLTSHAITLQKTVEYITKLQQ 708
Query: 433 EKKKQEEEVSTLRKDVMALKIMKVNYEQIVKA-----------HQDNPHEG--EDQVSDQ 573
E+ + +EE LR+++ L ++ +Q++ A H + + + +
Sbjct: 709 ERSQMQEEARRLREEIEELNATILSCQQLLPATGVPVTRRQFDHMRDMFDEYVKSRTLQN 768
Query: 574 VKFNVFQGIMDSLFQSFNASISVASFQELSACVFSWIEEHCKPQTLREIVIGVLHQL 744
KF +F I+ LF+SF +S +S EL SW++EHC LR V+ L L
Sbjct: 769 WKFWIFSVIIKPLFESFKGVVSTSSLDELHRTALSWLDEHCSLPILRPTVLNTLRHL 825
>ref|NP_001001172.2| hairy/enhancer-of-split related with YRPW motif protein 1 [Bos
taurus].
Length = 304
Score = 50.4 bits (119), Expect = 2e-06
Identities = 39/142 (27%), Positives = 65/142 (45%), Gaps = 3/142 (2%)
Frame = +1
Query: 73 EYAYSDNSLDPGIFVE---STRKGSVVSRANSIGSTSASSVPNTDDEDSDYHQESYKESY 243
EY+ S++ LD I VE + G++ S S+ T++S +
Sbjct: 7 EYSSSESELDETIEVEKESADENGNLSSALGSMSPTTSSQIL------------------ 48
Query: 244 KDRRRRAHTQAEQKRRDAIKRGYDDLQTIVPTCQQQDFSIGSQKLSKAIVLQKTIDYIQF 423
R+R E++RRD I +L+ +VP+ ++ GS KL KA +LQ T+D+++
Sbjct: 49 --ARKRRRGIIEKRRRDRINNSLSELRRLVPSAFEKQ---GSAKLEKAEILQMTVDHLKM 103
Query: 424 LHKEKKKQEEEVSTLRKDVMAL 489
LH K + L D +L
Sbjct: 104 LHTAGGKGYFDAHALAMDYRSL 125
>ref|NP_001099103.1| protein max [Bos taurus].
Length = 162
Score = 48.5 bits (114), Expect = 9e-06
Identities = 25/95 (26%), Positives = 50/95 (52%)
Frame = +1
Query: 190 NTDDEDSDYHQESYKESYKDRRRRAHTQAEQKRRDAIKRGYDDLQTIVPTCQQQDFSIGS 369
+ DD + + +E + +R H E+KRRD IK + L+ VP+ Q +
Sbjct: 3 DNDDIEVESDEEQPRFQSAADKRAHHNALERKRRDHIKDSFHSLRDSVPSLQGE-----K 57
Query: 370 QKLSKAIVLQKTIDYIQFLHKEKKKQEEEVSTLRK 474
Q+ S+A +L K +YIQ++ ++ ++++ L++
Sbjct: 58 QQASRAQILDKATEYIQYMRRKNHTHQQDIDDLKR 92
Database: RefSeq49_BP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 17,681,374
Number of sequences in database: 33,088
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33088
Number of Hits to DB: 41,238,331
Number of extensions: 1255754
Number of successful extensions: 4831
Number of sequences better than 1.0e-05: 9
Number of HSP's gapped: 4805
Number of HSP's successfully gapped: 9
Length of query: 338
Length of database: 17,681,374
Length adjustment: 103
Effective length of query: 235
Effective length of database: 14,273,310
Effective search space: 3354227850
Effective search space used: 3354227850
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)
Search to RefSeqSP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-014046
(1014 letters)
Database: RefSeq49_SP.fasta
24,897 sequences; 11,343,932 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_003131434.1| PREDICTED: max-like protein X-like isoform 2... 488 e-138
Alignment gi|XP_003131433.1| PREDICTED: max-like protein X-like isoform 1... 459 e-129
Alignment gi|XP_003131435.1| PREDICTED: max-like protein X-like isoform 3... 418 e-117
Alignment gi|XP_003354550.1| PREDICTED: Williams-Beuren syndrome chromoso... 91 8e-19
Alignment gi|XP_003124455.1| PREDICTED: Williams-Beuren syndrome chromoso... 91 8e-19
Alignment gi|XP_001926184.3| PREDICTED: MLX-interacting protein [Sus scro... 88 7e-18
Alignment gi|XP_003124456.1| PREDICTED: Williams-Beuren syndrome chromoso... 64 2e-10
Alignment gi|XP_001928567.2| PREDICTED: hairy/enhancer-of-split related w... 52 5e-07
Alignment gi|NP_001177174.1| upstream stimulatory factor 1 [Sus scrofa]. 48 8e-06
>ref|XP_003131434.1| PREDICTED: max-like protein X-like isoform 2 [Sus scrofa].
Length = 244
Score = 488 bits (1257), Expect = e-138
Identities = 244/244 (100%), Positives = 244/244 (100%)
Frame = +1
Query: 28 MTEPGASPEDPWVKVEYAYSDNSLDPGIFVESTRKGSVVSRANSIGSTSASSVPNTDDED 207
MTEPGASPEDPWVKVEYAYSDNSLDPGIFVESTRKGSVVSRANSIGSTSASSVPNTDDED
Sbjct: 1 MTEPGASPEDPWVKVEYAYSDNSLDPGIFVESTRKGSVVSRANSIGSTSASSVPNTDDED 60
Query: 208 SDYHQESYKESYKDRRRRAHTQAEQKRRDAIKRGYDDLQTIVPTCQQQDFSIGSQKLSKA 387
SDYHQESYKESYKDRRRRAHTQAEQKRRDAIKRGYDDLQTIVPTCQQQDFSIGSQKLSKA
Sbjct: 61 SDYHQESYKESYKDRRRRAHTQAEQKRRDAIKRGYDDLQTIVPTCQQQDFSIGSQKLSKA 120
Query: 388 IVLQKTIDYIQFLHKEKKKQEEEVSTLRKDVMALKIMKVNYEQIVKAHQDNPHEGEDQVS 567
IVLQKTIDYIQFLHKEKKKQEEEVSTLRKDVMALKIMKVNYEQIVKAHQDNPHEGEDQVS
Sbjct: 121 IVLQKTIDYIQFLHKEKKKQEEEVSTLRKDVMALKIMKVNYEQIVKAHQDNPHEGEDQVS 180
Query: 568 DQVKFNVFQGIMDSLFQSFNASISVASFQELSACVFSWIEEHCKPQTLREIVIGVLHQLK 747
DQVKFNVFQGIMDSLFQSFNASISVASFQELSACVFSWIEEHCKPQTLREIVIGVLHQLK
Sbjct: 181 DQVKFNVFQGIMDSLFQSFNASISVASFQELSACVFSWIEEHCKPQTLREIVIGVLHQLK 240
Query: 748 NQLY 759
NQLY
Sbjct: 241 NQLY 244
>ref|XP_003131433.1| PREDICTED: max-like protein X-like isoform 1 [Sus scrofa].
Length = 298
Score = 459 bits (1181), Expect = e-129
Identities = 231/231 (100%), Positives = 231/231 (100%)
Frame = +1
Query: 67 KVEYAYSDNSLDPGIFVESTRKGSVVSRANSIGSTSASSVPNTDDEDSDYHQESYKESYK 246
KVEYAYSDNSLDPGIFVESTRKGSVVSRANSIGSTSASSVPNTDDEDSDYHQESYKESYK
Sbjct: 68 KVEYAYSDNSLDPGIFVESTRKGSVVSRANSIGSTSASSVPNTDDEDSDYHQESYKESYK 127
Query: 247 DRRRRAHTQAEQKRRDAIKRGYDDLQTIVPTCQQQDFSIGSQKLSKAIVLQKTIDYIQFL 426
DRRRRAHTQAEQKRRDAIKRGYDDLQTIVPTCQQQDFSIGSQKLSKAIVLQKTIDYIQFL
Sbjct: 128 DRRRRAHTQAEQKRRDAIKRGYDDLQTIVPTCQQQDFSIGSQKLSKAIVLQKTIDYIQFL 187
Query: 427 HKEKKKQEEEVSTLRKDVMALKIMKVNYEQIVKAHQDNPHEGEDQVSDQVKFNVFQGIMD 606
HKEKKKQEEEVSTLRKDVMALKIMKVNYEQIVKAHQDNPHEGEDQVSDQVKFNVFQGIMD
Sbjct: 188 HKEKKKQEEEVSTLRKDVMALKIMKVNYEQIVKAHQDNPHEGEDQVSDQVKFNVFQGIMD 247
Query: 607 SLFQSFNASISVASFQELSACVFSWIEEHCKPQTLREIVIGVLHQLKNQLY 759
SLFQSFNASISVASFQELSACVFSWIEEHCKPQTLREIVIGVLHQLKNQLY
Sbjct: 248 SLFQSFNASISVASFQELSACVFSWIEEHCKPQTLREIVIGVLHQLKNQLY 298
>ref|XP_003131435.1| PREDICTED: max-like protein X-like isoform 3 [Sus scrofa].
Length = 214
Score = 418 bits (1074), Expect = e-117
Identities = 214/244 (87%), Positives = 214/244 (87%)
Frame = +1
Query: 28 MTEPGASPEDPWVKVEYAYSDNSLDPGIFVESTRKGSVVSRANSIGSTSASSVPNTDDED 207
MTEPGASPEDPWVKVEYAYSDNSLDP DDED
Sbjct: 1 MTEPGASPEDPWVKVEYAYSDNSLDP------------------------------DDED 30
Query: 208 SDYHQESYKESYKDRRRRAHTQAEQKRRDAIKRGYDDLQTIVPTCQQQDFSIGSQKLSKA 387
SDYHQESYKESYKDRRRRAHTQAEQKRRDAIKRGYDDLQTIVPTCQQQDFSIGSQKLSKA
Sbjct: 31 SDYHQESYKESYKDRRRRAHTQAEQKRRDAIKRGYDDLQTIVPTCQQQDFSIGSQKLSKA 90
Query: 388 IVLQKTIDYIQFLHKEKKKQEEEVSTLRKDVMALKIMKVNYEQIVKAHQDNPHEGEDQVS 567
IVLQKTIDYIQFLHKEKKKQEEEVSTLRKDVMALKIMKVNYEQIVKAHQDNPHEGEDQVS
Sbjct: 91 IVLQKTIDYIQFLHKEKKKQEEEVSTLRKDVMALKIMKVNYEQIVKAHQDNPHEGEDQVS 150
Query: 568 DQVKFNVFQGIMDSLFQSFNASISVASFQELSACVFSWIEEHCKPQTLREIVIGVLHQLK 747
DQVKFNVFQGIMDSLFQSFNASISVASFQELSACVFSWIEEHCKPQTLREIVIGVLHQLK
Sbjct: 151 DQVKFNVFQGIMDSLFQSFNASISVASFQELSACVFSWIEEHCKPQTLREIVIGVLHQLK 210
Query: 748 NQLY 759
NQLY
Sbjct: 211 NQLY 214
>ref|XP_003354550.1| PREDICTED: Williams-Beuren syndrome chromosomal region 14 protein
homolog [Sus scrofa].
Length = 347
Score = 91.3 bits (225), Expect = 8e-19
Identities = 60/179 (33%), Positives = 88/179 (49%), Gaps = 13/179 (7%)
Frame = +1
Query: 247 DRRRRAHTQAEQKRRDAIKRGYDDLQTIVPTCQQQDFSIGSQKLSKAIVLQKTIDYIQFL 426
+ RR H AEQKRR IK G+D L +V T Q + K+SKA LQKT +YI L
Sbjct: 24 ENRRITHISAEQKRRFNIKLGFDTLHGLVSTLSTQP----NLKMSKATTLQKTAEYITML 79
Query: 427 HKEKKKQEEEVSTLRKDVMALKI-MKVNYEQIVKAHQDNPHEGEDQVSDQV--------- 576
+E+ ++EE LR + L + + +Q+ H+ +Q+ D
Sbjct: 80 QQERAAKQEEAQQLRDQIEELNAAINLCQQQLPATGVPITHQRFNQMRDMFDDYVRTRTL 139
Query: 577 ---KFNVFQGIMDSLFQSFNASISVASFQELSACVFSWIEEHCKPQTLREIVIGVLHQL 744
KF VF ++ LF+SFN +S AS Q L +W++++C LR V+ L QL
Sbjct: 140 HNWKFWVFSILIRPLFESFNGMVSTASLQSLRQTSLAWLDQYCSLPALRPTVLNSLRQL 198
>ref|XP_003124455.1| PREDICTED: Williams-Beuren syndrome chromosomal region 14 protein
homolog isoform 1 [Sus scrofa].
Length = 859
Score = 91.3 bits (225), Expect = 8e-19
Identities = 60/179 (33%), Positives = 88/179 (49%), Gaps = 13/179 (7%)
Frame = +1
Query: 247 DRRRRAHTQAEQKRRDAIKRGYDDLQTIVPTCQQQDFSIGSQKLSKAIVLQKTIDYIQFL 426
+ RR H AEQKRR IK G+D L +V T Q + K+SKA LQKT +YI L
Sbjct: 655 ENRRITHISAEQKRRFNIKLGFDTLHGLVSTLSTQP----NLKMSKATTLQKTAEYITML 710
Query: 427 HKEKKKQEEEVSTLRKDVMALKI-MKVNYEQIVKAHQDNPHEGEDQVSDQV--------- 576
+E+ ++EE LR + L + + +Q+ H+ +Q+ D
Sbjct: 711 QQERAAKQEEAQQLRDQIEELNAAINLCQQQLPATGVPITHQRFNQMRDMFDDYVRTRTL 770
Query: 577 ---KFNVFQGIMDSLFQSFNASISVASFQELSACVFSWIEEHCKPQTLREIVIGVLHQL 744
KF VF ++ LF+SFN +S AS Q L +W++++C LR V+ L QL
Sbjct: 771 HNWKFWVFSILIRPLFESFNGMVSTASLQSLRQTSLAWLDQYCSLPALRPTVLNSLRQL 829
>ref|XP_001926184.3| PREDICTED: MLX-interacting protein [Sus scrofa].
Length = 822
Score = 88.2 bits (217), Expect = 7e-18
Identities = 55/177 (31%), Positives = 89/177 (50%), Gaps = 13/177 (7%)
Frame = +1
Query: 253 RRRAHTQAEQKRRDAIKRGYDDLQTIVPTCQQQDFSIGSQKLSKAIVLQKTIDYIQFLHK 432
R+ H AEQKRR IK G+D L +++ S ++ S AI LQKT++YI L +
Sbjct: 623 RQMKHISAEQKRRFNIKMGFDTLNSLI--------SNNTKLTSHAITLQKTVEYITKLQQ 674
Query: 433 EKKKQEEEVSTLRKDVMALKIMKVNYEQIVKA-----------HQDNPHEG--EDQVSDQ 573
E+ + +EE LR+++ L ++ +Q++ A H + + + +
Sbjct: 675 ERSQMQEEARRLREEIEELNATILSCQQLLPATGVPVTRRQFDHMRDMFDEYVKSRTLQN 734
Query: 574 VKFNVFQGIMDSLFQSFNASISVASFQELSACVFSWIEEHCKPQTLREIVIGVLHQL 744
KF +F I+ LF+SF +S +S +EL SW++EHC LR V+ L L
Sbjct: 735 WKFWIFSVIIKPLFESFKGVVSTSSLEELHRTALSWLDEHCSLPVLRPTVLNTLRHL 791
>ref|XP_003124456.1| PREDICTED: Williams-Beuren syndrome chromosomal region 14 protein
homolog isoform 2 [Sus scrofa].
Length = 840
Score = 63.5 bits (153), Expect = 2e-10
Identities = 50/179 (27%), Positives = 74/179 (41%), Gaps = 13/179 (7%)
Frame = +1
Query: 247 DRRRRAHTQAEQKRRDAIKRGYDDLQTIVPTCQQQDFSIGSQKLSKAIVLQKTIDYIQFL 426
+ RR H AEQKRR IK G+D L +V T Q
Sbjct: 655 ENRRITHISAEQKRRFNIKLGFDTLHGLVSTLSTQPNL---------------------- 692
Query: 427 HKEKKKQEEEVSTLRKDVMALK-IMKVNYEQIVKAHQDNPHEGEDQVSDQV--------- 576
KE+ ++EE LR + L + + +Q+ H+ +Q+ D
Sbjct: 693 -KERAAKQEEAQQLRDQIEELNAAINLCQQQLPATGVPITHQRFNQMRDMFDDYVRTRTL 751
Query: 577 ---KFNVFQGIMDSLFQSFNASISVASFQELSACVFSWIEEHCKPQTLREIVIGVLHQL 744
KF VF ++ LF+SFN +S AS Q L +W++++C LR V+ L QL
Sbjct: 752 HNWKFWVFSILIRPLFESFNGMVSTASLQSLRQTSLAWLDQYCSLPALRPTVLNSLRQL 810
>ref|XP_001928567.2| PREDICTED: hairy/enhancer-of-split related with YRPW motif protein
1 [Sus scrofa].
Length = 304
Score = 52.0 bits (123), Expect = 5e-07
Identities = 40/142 (28%), Positives = 65/142 (45%), Gaps = 3/142 (2%)
Frame = +1
Query: 73 EYAYSDNSLDPGIFVE---STRKGSVVSRANSIGSTSASSVPNTDDEDSDYHQESYKESY 243
EY+ SD+ LD I VE + G++ S S+ T++S +
Sbjct: 7 EYSSSDSELDETIEVEKESADENGNLSSALGSMSPTTSSQIL------------------ 48
Query: 244 KDRRRRAHTQAEQKRRDAIKRGYDDLQTIVPTCQQQDFSIGSQKLSKAIVLQKTIDYIQF 423
R+R E++RRD I +L+ +VP+ ++ GS KL KA +LQ T+D+++
Sbjct: 49 --ARKRRRGIIEKRRRDRINNSLSELRRLVPSAFEKQ---GSAKLEKAEILQMTVDHLKM 103
Query: 424 LHKEKKKQEEEVSTLRKDVMAL 489
LH K + L D +L
Sbjct: 104 LHTAGGKGYFDAHALAMDYRSL 125
>ref|NP_001177174.1| upstream stimulatory factor 1 [Sus scrofa].
Length = 310
Score = 48.1 bits (113), Expect = 8e-06
Identities = 30/102 (29%), Positives = 45/102 (44%)
Frame = +1
Query: 163 GSTSASSVPNTDDEDSDYHQESYKESYKDRRRRAHTQAEQKRRDAIKRGYDDLQTIVPTC 342
G + S P T E+ + + ++RR H + E++RRD I L I+P C
Sbjct: 172 GGSQRSIAPRTHPYSPK--SEAPRTTRDEKRRAQHNEVERRRRDKINNWIVQLSKIIPDC 229
Query: 343 QQQDFSIGSQKLSKAIVLQKTIDYIQFLHKEKKKQEEEVSTL 468
+ G SK +L K DYIQ L + + EE+ L
Sbjct: 230 SMESTKSGQ---SKGGILSKACDYIQELRQSNHRLSEELQGL 268
Database: RefSeq49_SP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 11,343,932
Number of sequences in database: 24,897
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 24897
Number of Hits to DB: 26,645,994
Number of extensions: 812264
Number of successful extensions: 3080
Number of sequences better than 1.0e-05: 9
Number of HSP's gapped: 3053
Number of HSP's successfully gapped: 9
Length of query: 338
Length of database: 11,343,932
Length adjustment: 100
Effective length of query: 238
Effective length of database: 8,854,232
Effective search space: 2107307216
Effective search space used: 2107307216
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)
Search to RefSeqMP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-014046
(1014 letters)
Database: RefSeq49_MP.fasta
30,036 sequences; 15,617,559 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001152857.1| max-like protein X isoform beta [Mus musculu... 479 e-135
Alignment gi|NP_035680.3| max-like protein X isoform gamma [Mus musculus]. 451 e-127
Alignment gi|NP_001152856.1| max-like protein X isoform alpha [Mus muscul... 411 e-115
Alignment gi|NP_067430.2| Williams-Beuren syndrome chromosomal region 14 ... 93 3e-19
Alignment gi|NP_598678.2| MLX-interacting protein isoform 2 [Mus musculus]. 89 5e-18
Alignment gi|NP_034553.2| hairy/enhancer-of-split related with YRPW motif... 50 3e-06
>ref|NP_001152857.1| max-like protein X isoform beta [Mus musculus].
Length = 244
Score = 479 bits (1232), Expect = e-135
Identities = 239/244 (97%), Positives = 241/244 (98%)
Frame = +1
Query: 28 MTEPGASPEDPWVKVEYAYSDNSLDPGIFVESTRKGSVVSRANSIGSTSASSVPNTDDED 207
MTEPGASPEDPWVKVEYAYSDNSLDPG+FVEST KGSVVSRANSIGSTSASSVPNTDDED
Sbjct: 1 MTEPGASPEDPWVKVEYAYSDNSLDPGLFVESTHKGSVVSRANSIGSTSASSVPNTDDED 60
Query: 208 SDYHQESYKESYKDRRRRAHTQAEQKRRDAIKRGYDDLQTIVPTCQQQDFSIGSQKLSKA 387
SDY QESYKESYKDRRRRAHTQAEQKRRDAIKRGYDDLQTIVPTCQQQDFSIGSQKLSKA
Sbjct: 61 SDYQQESYKESYKDRRRRAHTQAEQKRRDAIKRGYDDLQTIVPTCQQQDFSIGSQKLSKA 120
Query: 388 IVLQKTIDYIQFLHKEKKKQEEEVSTLRKDVMALKIMKVNYEQIVKAHQDNPHEGEDQVS 567
IVLQKTIDYIQFLHKEKKKQEEEVSTLRKDV ALKIMKVNYEQIVKAHQDNPHEGEDQVS
Sbjct: 121 IVLQKTIDYIQFLHKEKKKQEEEVSTLRKDVTALKIMKVNYEQIVKAHQDNPHEGEDQVS 180
Query: 568 DQVKFNVFQGIMDSLFQSFNASISVASFQELSACVFSWIEEHCKPQTLREIVIGVLHQLK 747
DQVKFNVFQGIMDSLFQSFNASISVASFQELSACVFSWIEEHC+PQTLREIVIGVLHQLK
Sbjct: 181 DQVKFNVFQGIMDSLFQSFNASISVASFQELSACVFSWIEEHCEPQTLREIVIGVLHQLK 240
Query: 748 NQLY 759
NQLY
Sbjct: 241 NQLY 244
>ref|NP_035680.3| max-like protein X isoform gamma [Mus musculus].
Length = 298
Score = 451 bits (1159), Expect = e-127
Identities = 233/266 (87%), Positives = 236/266 (88%), Gaps = 16/266 (6%)
Frame = +1
Query: 10 RFGGSEMTEPGASPEDPWV----------------KVEYAYSDNSLDPGIFVESTRKGSV 141
R G P SPE P + KVEYAYSDNSLDPG+FVEST KGSV
Sbjct: 33 RRGSGRRGAPQLSPESPLLSGARGCREDSSHPACAKVEYAYSDNSLDPGLFVESTHKGSV 92
Query: 142 VSRANSIGSTSASSVPNTDDEDSDYHQESYKESYKDRRRRAHTQAEQKRRDAIKRGYDDL 321
VSRANSIGSTSASSVPNTDDEDSDY QESYKESYKDRRRRAHTQAEQKRRDAIKRGYDDL
Sbjct: 93 VSRANSIGSTSASSVPNTDDEDSDYQQESYKESYKDRRRRAHTQAEQKRRDAIKRGYDDL 152
Query: 322 QTIVPTCQQQDFSIGSQKLSKAIVLQKTIDYIQFLHKEKKKQEEEVSTLRKDVMALKIMK 501
QTIVPTCQQQDFSIGSQKLSKAIVLQKTIDYIQFLHKEKKKQEEEVSTLRKDV ALKIMK
Sbjct: 153 QTIVPTCQQQDFSIGSQKLSKAIVLQKTIDYIQFLHKEKKKQEEEVSTLRKDVTALKIMK 212
Query: 502 VNYEQIVKAHQDNPHEGEDQVSDQVKFNVFQGIMDSLFQSFNASISVASFQELSACVFSW 681
VNYEQIVKAHQDNPHEGEDQVSDQVKFNVFQGIMDSLFQSFNASISVASFQELSACVFSW
Sbjct: 213 VNYEQIVKAHQDNPHEGEDQVSDQVKFNVFQGIMDSLFQSFNASISVASFQELSACVFSW 272
Query: 682 IEEHCKPQTLREIVIGVLHQLKNQLY 759
IEEHC+PQTLREIVIGVLHQLKNQLY
Sbjct: 273 IEEHCEPQTLREIVIGVLHQLKNQLY 298
>ref|NP_001152856.1| max-like protein X isoform alpha [Mus musculus].
Length = 214
Score = 411 bits (1056), Expect = e-115
Identities = 211/244 (86%), Positives = 212/244 (86%)
Frame = +1
Query: 28 MTEPGASPEDPWVKVEYAYSDNSLDPGIFVESTRKGSVVSRANSIGSTSASSVPNTDDED 207
MTEPGASPEDPWVKVEYAYSDNSLDP DDED
Sbjct: 1 MTEPGASPEDPWVKVEYAYSDNSLDP------------------------------DDED 30
Query: 208 SDYHQESYKESYKDRRRRAHTQAEQKRRDAIKRGYDDLQTIVPTCQQQDFSIGSQKLSKA 387
SDY QESYKESYKDRRRRAHTQAEQKRRDAIKRGYDDLQTIVPTCQQQDFSIGSQKLSKA
Sbjct: 31 SDYQQESYKESYKDRRRRAHTQAEQKRRDAIKRGYDDLQTIVPTCQQQDFSIGSQKLSKA 90
Query: 388 IVLQKTIDYIQFLHKEKKKQEEEVSTLRKDVMALKIMKVNYEQIVKAHQDNPHEGEDQVS 567
IVLQKTIDYIQFLHKEKKKQEEEVSTLRKDV ALKIMKVNYEQIVKAHQDNPHEGEDQVS
Sbjct: 91 IVLQKTIDYIQFLHKEKKKQEEEVSTLRKDVTALKIMKVNYEQIVKAHQDNPHEGEDQVS 150
Query: 568 DQVKFNVFQGIMDSLFQSFNASISVASFQELSACVFSWIEEHCKPQTLREIVIGVLHQLK 747
DQVKFNVFQGIMDSLFQSFNASISVASFQELSACVFSWIEEHC+PQTLREIVIGVLHQLK
Sbjct: 151 DQVKFNVFQGIMDSLFQSFNASISVASFQELSACVFSWIEEHCEPQTLREIVIGVLHQLK 210
Query: 748 NQLY 759
NQLY
Sbjct: 211 NQLY 214
>ref|NP_067430.2| Williams-Beuren syndrome chromosomal region 14 protein homolog [Mus
musculus].
Length = 864
Score = 93.2 bits (230), Expect = 3e-19
Identities = 62/179 (34%), Positives = 87/179 (48%), Gaps = 13/179 (7%)
Frame = +1
Query: 247 DRRRRAHTQAEQKRRDAIKRGYDDLQTIVPTCQQQDFSIGSQKLSKAIVLQKTIDYIQFL 426
+ RR H AEQKRR IK G+D L +V T Q S K+SKA LQKT +YI L
Sbjct: 660 ENRRITHISAEQKRRFNIKLGFDTLHGLVSTLSAQP----SLKVSKATTLQKTAEYILML 715
Query: 427 HKEKKKQEEEVSTLRKDVMALKI-MKVNYEQIVKAHQDNPHEGEDQVSDQV--------- 576
+E+ +EE LR ++ L + + +Q+ H+ DQ+ D
Sbjct: 716 QQERAAMQEEAQQLRDEIEELNAAINLCQQQLPATGVPITHQRFDQMRDMFDDYVRTRTL 775
Query: 577 ---KFNVFQGIMDSLFQSFNASISVASFQELSACVFSWIEEHCKPQTLREIVIGVLHQL 744
KF VF ++ LF+SFN +S AS L +W+E++C LR V+ L QL
Sbjct: 776 HNWKFWVFSILIRPLFESFNGMVSTASLHSLRQTSLAWLEQYCSLPALRPTVLNSLRQL 834
>ref|NP_598678.2| MLX-interacting protein isoform 2 [Mus musculus].
Length = 917
Score = 89.0 bits (219), Expect = 5e-18
Identities = 54/178 (30%), Positives = 92/178 (51%), Gaps = 13/178 (7%)
Frame = +1
Query: 250 RRRRAHTQAEQKRRDAIKRGYDDLQTIVPTCQQQDFSIGSQKLSKAIVLQKTIDYIQFLH 429
+ R+ H AEQKRR I+ G++ L +++ S S++ S AI LQKT++YI L
Sbjct: 717 KNRQKHISAEQKRRFNIRMGFNTLNSLI--------SNNSKQTSHAITLQKTMEYITKLQ 768
Query: 430 KEKKKQEEEVSTLRKDVMALKIMKVNYEQIVKA--------HQDNPHEGEDQ-----VSD 570
+E+ + +EE LR+++ L ++ +Q++ A D+ + D+
Sbjct: 769 QERMQMQEEARRLREEIEELNTTIISCQQLLPATGVPVNCRQLDHMRDMFDEYVKSRTLQ 828
Query: 571 QVKFNVFQGIMDSLFQSFNASISVASFQELSACVFSWIEEHCKPQTLREIVIGVLHQL 744
KF +F I+ LF+SF +S +S +E SW+++HC LR +V+ L QL
Sbjct: 829 NWKFWIFSMIIKPLFESFKGMVSTSSLEEFHRTALSWLDQHCSLPVLRPMVLSTLRQL 886
>ref|NP_034553.2| hairy/enhancer-of-split related with YRPW motif protein 1 [Mus
musculus].
Length = 299
Score = 50.1 bits (118), Expect = 3e-06
Identities = 40/142 (28%), Positives = 65/142 (45%), Gaps = 3/142 (2%)
Frame = +1
Query: 73 EYAYSDNSLDPGIFVE---STRKGSVVSRANSIGSTSASSVPNTDDEDSDYHQESYKESY 243
+Y+ SD+ LD I VE + G++ S S+ T++S V
Sbjct: 7 DYSSSDSELDETIEVEKESADENGNLSSALCSMSPTTSSQVL------------------ 48
Query: 244 KDRRRRAHTQAEQKRRDAIKRGYDDLQTIVPTCQQQDFSIGSQKLSKAIVLQKTIDYIQF 423
R+R E++RRD I +L+ +VP+ ++ GS KL KA +LQ T+D+++
Sbjct: 49 --ARKRRRGIIEKRRRDRINNSLSELRRLVPSAFEKQ---GSAKLEKAEILQMTVDHLKM 103
Query: 424 LHKEKKKQEEEVSTLRKDVMAL 489
LH K + L D +L
Sbjct: 104 LHTAGGKGYFDAHALAMDYRSL 125
Database: RefSeq49_MP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 15,617,559
Number of sequences in database: 30,036
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 30036
Number of Hits to DB: 35,589,439
Number of extensions: 1049722
Number of successful extensions: 4088
Number of sequences better than 1.0e-05: 6
Number of HSP's gapped: 4055
Number of HSP's successfully gapped: 6
Length of query: 338
Length of database: 15,617,559
Length adjustment: 102
Effective length of query: 236
Effective length of database: 12,553,887
Effective search space: 2962717332
Effective search space used: 2962717332
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)
Search to RefSeqHP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-014046
(1014 letters)
Database: RefSeq49_HP.fasta
32,964 sequences; 18,297,164 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_937847.1| max-like protein X isoform beta [Homo sapiens]. 484 e-137
Alignment gi|NP_733752.1| max-like protein X isoform gamma [Homo sapiens]. 455 e-128
Alignment gi|NP_937848.1| max-like protein X isoform alpha [Homo sapiens]. 414 e-116
Alignment gi|NP_116569.1| Williams-Beuren syndrome chromosomal region 14 ... 90 3e-18
Alignment gi|NP_116571.1| Williams-Beuren syndrome chromosomal region 14 ... 89 5e-18
Alignment gi|NP_055753.3| MLX-interacting protein [Homo sapiens]. 86 4e-17
Alignment gi|NP_116570.1| Williams-Beuren syndrome chromosomal region 14 ... 62 6e-10
Alignment gi|NP_116572.1| Williams-Beuren syndrome chromosomal region 14 ... 62 1e-09
Alignment gi|NP_001035798.1| hairy/enhancer-of-split related with YRPW mo... 54 3e-07
Alignment gi|NP_036390.3| hairy/enhancer-of-split related with YRPW motif... 52 9e-07
>ref|NP_937847.1| max-like protein X isoform beta [Homo sapiens].
Length = 244
Score = 484 bits (1246), Expect = e-137
Identities = 241/244 (98%), Positives = 243/244 (99%)
Frame = +1
Query: 28 MTEPGASPEDPWVKVEYAYSDNSLDPGIFVESTRKGSVVSRANSIGSTSASSVPNTDDED 207
MTEPGASPEDPWVKVEYAYSDNSLDPG+FVESTRKGSVVSRANSIGSTSASSVPNTDDED
Sbjct: 1 MTEPGASPEDPWVKVEYAYSDNSLDPGLFVESTRKGSVVSRANSIGSTSASSVPNTDDED 60
Query: 208 SDYHQESYKESYKDRRRRAHTQAEQKRRDAIKRGYDDLQTIVPTCQQQDFSIGSQKLSKA 387
SDYHQE+YKESYKDRRRRAHTQAEQKRRDAIKRGYDDLQTIVPTCQQQDFSIGSQKLSKA
Sbjct: 61 SDYHQEAYKESYKDRRRRAHTQAEQKRRDAIKRGYDDLQTIVPTCQQQDFSIGSQKLSKA 120
Query: 388 IVLQKTIDYIQFLHKEKKKQEEEVSTLRKDVMALKIMKVNYEQIVKAHQDNPHEGEDQVS 567
IVLQKTIDYIQFLHKEKKKQEEEVSTLRKDV ALKIMKVNYEQIVKAHQDNPHEGEDQVS
Sbjct: 121 IVLQKTIDYIQFLHKEKKKQEEEVSTLRKDVTALKIMKVNYEQIVKAHQDNPHEGEDQVS 180
Query: 568 DQVKFNVFQGIMDSLFQSFNASISVASFQELSACVFSWIEEHCKPQTLREIVIGVLHQLK 747
DQVKFNVFQGIMDSLFQSFNASISVASFQELSACVFSWIEEHCKPQTLREIVIGVLHQLK
Sbjct: 181 DQVKFNVFQGIMDSLFQSFNASISVASFQELSACVFSWIEEHCKPQTLREIVIGVLHQLK 240
Query: 748 NQLY 759
NQLY
Sbjct: 241 NQLY 244
>ref|NP_733752.1| max-like protein X isoform gamma [Homo sapiens].
Length = 298
Score = 455 bits (1170), Expect = e-128
Identities = 228/231 (98%), Positives = 230/231 (99%)
Frame = +1
Query: 67 KVEYAYSDNSLDPGIFVESTRKGSVVSRANSIGSTSASSVPNTDDEDSDYHQESYKESYK 246
KVEYAYSDNSLDPG+FVESTRKGSVVSRANSIGSTSASSVPNTDDEDSDYHQE+YKESYK
Sbjct: 68 KVEYAYSDNSLDPGLFVESTRKGSVVSRANSIGSTSASSVPNTDDEDSDYHQEAYKESYK 127
Query: 247 DRRRRAHTQAEQKRRDAIKRGYDDLQTIVPTCQQQDFSIGSQKLSKAIVLQKTIDYIQFL 426
DRRRRAHTQAEQKRRDAIKRGYDDLQTIVPTCQQQDFSIGSQKLSKAIVLQKTIDYIQFL
Sbjct: 128 DRRRRAHTQAEQKRRDAIKRGYDDLQTIVPTCQQQDFSIGSQKLSKAIVLQKTIDYIQFL 187
Query: 427 HKEKKKQEEEVSTLRKDVMALKIMKVNYEQIVKAHQDNPHEGEDQVSDQVKFNVFQGIMD 606
HKEKKKQEEEVSTLRKDV ALKIMKVNYEQIVKAHQDNPHEGEDQVSDQVKFNVFQGIMD
Sbjct: 188 HKEKKKQEEEVSTLRKDVTALKIMKVNYEQIVKAHQDNPHEGEDQVSDQVKFNVFQGIMD 247
Query: 607 SLFQSFNASISVASFQELSACVFSWIEEHCKPQTLREIVIGVLHQLKNQLY 759
SLFQSFNASISVASFQELSACVFSWIEEHCKPQTLREIVIGVLHQLKNQLY
Sbjct: 248 SLFQSFNASISVASFQELSACVFSWIEEHCKPQTLREIVIGVLHQLKNQLY 298
>ref|NP_937848.1| max-like protein X isoform alpha [Homo sapiens].
Length = 214
Score = 414 bits (1065), Expect = e-116
Identities = 212/244 (86%), Positives = 213/244 (87%)
Frame = +1
Query: 28 MTEPGASPEDPWVKVEYAYSDNSLDPGIFVESTRKGSVVSRANSIGSTSASSVPNTDDED 207
MTEPGASPEDPWVKVEYAYSDNSLDP DDED
Sbjct: 1 MTEPGASPEDPWVKVEYAYSDNSLDP------------------------------DDED 30
Query: 208 SDYHQESYKESYKDRRRRAHTQAEQKRRDAIKRGYDDLQTIVPTCQQQDFSIGSQKLSKA 387
SDYHQE+YKESYKDRRRRAHTQAEQKRRDAIKRGYDDLQTIVPTCQQQDFSIGSQKLSKA
Sbjct: 31 SDYHQEAYKESYKDRRRRAHTQAEQKRRDAIKRGYDDLQTIVPTCQQQDFSIGSQKLSKA 90
Query: 388 IVLQKTIDYIQFLHKEKKKQEEEVSTLRKDVMALKIMKVNYEQIVKAHQDNPHEGEDQVS 567
IVLQKTIDYIQFLHKEKKKQEEEVSTLRKDV ALKIMKVNYEQIVKAHQDNPHEGEDQVS
Sbjct: 91 IVLQKTIDYIQFLHKEKKKQEEEVSTLRKDVTALKIMKVNYEQIVKAHQDNPHEGEDQVS 150
Query: 568 DQVKFNVFQGIMDSLFQSFNASISVASFQELSACVFSWIEEHCKPQTLREIVIGVLHQLK 747
DQVKFNVFQGIMDSLFQSFNASISVASFQELSACVFSWIEEHCKPQTLREIVIGVLHQLK
Sbjct: 151 DQVKFNVFQGIMDSLFQSFNASISVASFQELSACVFSWIEEHCKPQTLREIVIGVLHQLK 210
Query: 748 NQLY 759
NQLY
Sbjct: 211 NQLY 214
>ref|NP_116569.1| Williams-Beuren syndrome chromosomal region 14 protein isoform alpha
[Homo sapiens].
Length = 852
Score = 90.1 bits (222), Expect = 3e-18
Identities = 61/179 (34%), Positives = 87/179 (48%), Gaps = 13/179 (7%)
Frame = +1
Query: 247 DRRRRAHTQAEQKRRDAIKRGYDDLQTIVPTCQQQDFSIGSQKLSKAIVLQKTIDYIQFL 426
+ RR H AEQKRR IK G+D L +V T Q S K+SKA LQKT +YI L
Sbjct: 648 ENRRITHISAEQKRRFNIKLGFDTLHGLVSTLSAQP----SLKVSKATTLQKTAEYILML 703
Query: 427 HKEKKKQEEEVSTLRKDVMALKI-MKVNYEQIVKAHQDNPHEGEDQVSDQV--------- 576
+E+ +EE LR ++ L + + +Q+ H+ DQ+ D
Sbjct: 704 QQERAGLQEEAQQLRDEIEELNAAINLCQQQLPATGVPITHQRFDQMRDMFDDYVRTRTL 763
Query: 577 ---KFNVFQGIMDSLFQSFNASISVASFQELSACVFSWIEEHCKPQTLREIVIGVLHQL 744
KF VF ++ LF+SFN +S AS L +W++++C LR V+ L QL
Sbjct: 764 HNWKFWVFSILIRPLFESFNGMVSTASVHTLRQTSLAWLDQYCSLPALRPTVLNSLRQL 822
>ref|NP_116571.1| Williams-Beuren syndrome chromosomal region 14 protein isoform gamma
[Homo sapiens].
Length = 850
Score = 89.4 bits (220), Expect = 5e-18
Identities = 61/177 (34%), Positives = 86/177 (48%), Gaps = 13/177 (7%)
Frame = +1
Query: 253 RRRAHTQAEQKRRDAIKRGYDDLQTIVPTCQQQDFSIGSQKLSKAIVLQKTIDYIQFLHK 432
RR H AEQKRR IK G+D L +V T Q S K+SKA LQKT +YI L +
Sbjct: 648 RRITHISAEQKRRFNIKLGFDTLHGLVSTLSAQP----SLKVSKATTLQKTAEYILMLQQ 703
Query: 433 EKKKQEEEVSTLRKDVMALKI-MKVNYEQIVKAHQDNPHEGEDQVSDQV----------- 576
E+ +EE LR ++ L + + +Q+ H+ DQ+ D
Sbjct: 704 ERAGLQEEAQQLRDEIEELNAAINLCQQQLPATGVPITHQRFDQMRDMFDDYVRTRTLHN 763
Query: 577 -KFNVFQGIMDSLFQSFNASISVASFQELSACVFSWIEEHCKPQTLREIVIGVLHQL 744
KF VF ++ LF+SFN +S AS L +W++++C LR V+ L QL
Sbjct: 764 WKFWVFSILIRPLFESFNGMVSTASVHTLRQTSLAWLDQYCSLPALRPTVLNSLRQL 820
>ref|NP_055753.3| MLX-interacting protein [Homo sapiens].
Length = 919
Score = 86.3 bits (212), Expect = 4e-17
Identities = 55/177 (31%), Positives = 90/177 (50%), Gaps = 13/177 (7%)
Frame = +1
Query: 253 RRRAHTQAEQKRRDAIKRGYDDLQTIVPTCQQQDFSIGSQKLSKAIVLQKTIDYIQFLHK 432
R+ H AEQKRR IK +D L +++ S S+ S AI LQKT++YI L +
Sbjct: 720 RQMKHISAEQKRRFNIKMCFDMLNSLI--------SNNSKLTSHAITLQKTVEYITKLQQ 771
Query: 433 EKKKQEEEVSTLRKDVMALKIMKVNYEQIVKA-----------HQDNPHEG--EDQVSDQ 573
E+ + +EE LR+++ L ++ +Q++ A H + + + +
Sbjct: 772 ERGQMQEEARRLREEIEELNATIISCQQLLPATGVPVTRRQFDHMKDMFDEYVKTRTLQN 831
Query: 574 VKFNVFQGIMDSLFQSFNASISVASFQELSACVFSWIEEHCKPQTLREIVIGVLHQL 744
KF +F I+ LF+SF +S +S +EL SW+++HC LR +V+ L QL
Sbjct: 832 WKFWIFSIIIKPLFESFKGMVSTSSLEELHRTALSWLDQHCSLPILRPMVLSTLRQL 888
>ref|NP_116570.1| Williams-Beuren syndrome chromosomal region 14 protein isoform beta
[Homo sapiens].
Length = 833
Score = 62.4 bits (150), Expect = 6e-10
Identities = 50/179 (27%), Positives = 73/179 (40%), Gaps = 13/179 (7%)
Frame = +1
Query: 247 DRRRRAHTQAEQKRRDAIKRGYDDLQTIVPTCQQQDFSIGSQKLSKAIVLQKTIDYIQFL 426
+ RR H AEQKRR IK G+D L +V T Q
Sbjct: 648 ENRRITHISAEQKRRFNIKLGFDTLHGLVSTLSAQPSL---------------------- 685
Query: 427 HKEKKKQEEEVSTLRKDVMALK-IMKVNYEQIVKAHQDNPHEGEDQVSDQV--------- 576
KE+ +EE LR ++ L + + +Q+ H+ DQ+ D
Sbjct: 686 -KERAGLQEEAQQLRDEIEELNAAINLCQQQLPATGVPITHQRFDQMRDMFDDYVRTRTL 744
Query: 577 ---KFNVFQGIMDSLFQSFNASISVASFQELSACVFSWIEEHCKPQTLREIVIGVLHQL 744
KF VF ++ LF+SFN +S AS L +W++++C LR V+ L QL
Sbjct: 745 HNWKFWVFSILIRPLFESFNGMVSTASVHTLRQTSLAWLDQYCSLPALRPTVLNSLRQL 803
>ref|NP_116572.1| Williams-Beuren syndrome chromosomal region 14 protein isoform delta
[Homo sapiens].
Length = 831
Score = 61.6 bits (148), Expect = 1e-09
Identities = 50/177 (28%), Positives = 72/177 (40%), Gaps = 13/177 (7%)
Frame = +1
Query: 253 RRRAHTQAEQKRRDAIKRGYDDLQTIVPTCQQQDFSIGSQKLSKAIVLQKTIDYIQFLHK 432
RR H AEQKRR IK G+D L +V T Q K
Sbjct: 648 RRITHISAEQKRRFNIKLGFDTLHGLVSTLSAQPSL-----------------------K 684
Query: 433 EKKKQEEEVSTLRKDVMALK-IMKVNYEQIVKAHQDNPHEGEDQVSDQV----------- 576
E+ +EE LR ++ L + + +Q+ H+ DQ+ D
Sbjct: 685 ERAGLQEEAQQLRDEIEELNAAINLCQQQLPATGVPITHQRFDQMRDMFDDYVRTRTLHN 744
Query: 577 -KFNVFQGIMDSLFQSFNASISVASFQELSACVFSWIEEHCKPQTLREIVIGVLHQL 744
KF VF ++ LF+SFN +S AS L +W++++C LR V+ L QL
Sbjct: 745 WKFWVFSILIRPLFESFNGMVSTASVHTLRQTSLAWLDQYCSLPALRPTVLNSLRQL 801
>ref|NP_001035798.1| hairy/enhancer-of-split related with YRPW motif protein 1 isoform b
[Homo sapiens].
Length = 308
Score = 53.5 bits (127), Expect = 3e-07
Identities = 41/143 (28%), Positives = 66/143 (46%), Gaps = 4/143 (2%)
Frame = +1
Query: 73 EYAYSDNSLDPGIFVE---STRKGSVVSRANSIGSTSASSVPNTDDEDSDYHQESYKESY 243
EY+ SD+ LD I VE + G++ S S+ T++S +
Sbjct: 7 EYSSSDSELDETIEVEKESADENGNLSSALGSMSPTTSSQIL------------------ 48
Query: 244 KDRRRRAHTQAEQKRRDAIKRGYDDLQTIVPTC-QQQDFSIGSQKLSKAIVLQKTIDYIQ 420
R+R E++RRD I +L+ +VP+ ++Q GS KL KA +LQ T+D+++
Sbjct: 49 --ARKRRRGIIEKRRRDRINNSLSELRRLVPSAFEKQVMEQGSAKLEKAEILQMTVDHLK 106
Query: 421 FLHKEKKKQEEEVSTLRKDVMAL 489
LH K + L D +L
Sbjct: 107 MLHTAGGKGYFDAHALAMDYRSL 129
>ref|NP_036390.3| hairy/enhancer-of-split related with YRPW motif protein 1 isoform a
[Homo sapiens].
Length = 304
Score = 52.0 bits (123), Expect = 9e-07
Identities = 40/142 (28%), Positives = 65/142 (45%), Gaps = 3/142 (2%)
Frame = +1
Query: 73 EYAYSDNSLDPGIFVE---STRKGSVVSRANSIGSTSASSVPNTDDEDSDYHQESYKESY 243
EY+ SD+ LD I VE + G++ S S+ T++S +
Sbjct: 7 EYSSSDSELDETIEVEKESADENGNLSSALGSMSPTTSSQIL------------------ 48
Query: 244 KDRRRRAHTQAEQKRRDAIKRGYDDLQTIVPTCQQQDFSIGSQKLSKAIVLQKTIDYIQF 423
R+R E++RRD I +L+ +VP+ ++ GS KL KA +LQ T+D+++
Sbjct: 49 --ARKRRRGIIEKRRRDRINNSLSELRRLVPSAFEKQ---GSAKLEKAEILQMTVDHLKM 103
Query: 424 LHKEKKKQEEEVSTLRKDVMAL 489
LH K + L D +L
Sbjct: 104 LHTAGGKGYFDAHALAMDYRSL 125
Database: RefSeq49_HP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,297,164
Number of sequences in database: 32,964
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 32964
Number of Hits to DB: 42,234,557
Number of extensions: 1268637
Number of successful extensions: 4771
Number of sequences better than 1.0e-05: 10
Number of HSP's gapped: 4744
Number of HSP's successfully gapped: 10
Length of query: 338
Length of database: 18,297,164
Length adjustment: 103
Effective length of query: 235
Effective length of database: 14,901,872
Effective search space: 3501939920
Effective search space used: 3501939920
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)
Search to Sscrofa10_2
BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-014046
(1014 letters)
Database: Sscrofa_10.2.fasta
4582 sequences; 2,808,509,378 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Sscrofa_Chr12 535 e-149
>Sscrofa_Chr12
|| Length = 63588571
Score = 535 bits (270), Expect = e-149
Identities = 297/302 (98%), Gaps = 3/302 (0%)
Strand = Plus / Minus
Query: 703 cagaccctacgggagattgtgattggtgtcctgcaccaactgaagaaccagctttactga 762
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20463530 cagaccctacgggagattgtgattggtgtcctgcaccaactgaagaaccagctttactga 20463471
Query: 763 ccagctcttggaacctgcagaacagccagcaagaggccttgactttcctacctggccgtg 822
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20463470 ccagctcttggaacctgcagaacagccagcaagaggccttgactttcctacctggccgtg 20463411
Query: 823 gagccactgggcttgtgagactggactgtgacactgcacaacggtcagcttcttggtgtt 882
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20463410 gagccactgggcttgtgagactggactgtgacactgcacaacggtcagcttcttggtgtt 20463351
Query: 883 tggctccccacccctcccatcttcagtgggggagggttta-tatgaaagctttattttat 941
|||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||
Sbjct: 20463350 tggctccccacccctcccatcttcagtgggggagggtttattatgaaagctttaattta- 20463292
Query: 942 ttatggtga-cgtatctcaaacctgcctggtctccccttctccctgtagaagtcctcagg 1000
||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20463291 ttatgttgaccgtatctcaaacctgcctggtctccccttctccctgtagaagtcctcagg 20463232
Query: 1001 at 1002
||
Sbjct: 20463231 at 20463230
Score = 400 bits (202), Expect = e-109
Identities = 202/202 (100%)
Strand = Plus / Minus
Query: 504 gaactatgagcagatagtgaaggcacaccaggacaacccccatgagggggaggaccaggt 563
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20467496 gaactatgagcagatagtgaaggcacaccaggacaacccccatgagggggaggaccaggt 20467437
Query: 564 ctctgaccaggtcaagttcaacgtgtttcaaggcatcatggactccctcttccagtcctt 623
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20467436 ctctgaccaggtcaagttcaacgtgtttcaaggcatcatggactccctcttccagtcctt 20467377
Query: 624 caacgcctccatctctgtggccagcttccaggagctgtcggcgtgcgtcttcagctggat 683
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20467376 caacgcctccatctctgtggccagcttccaggagctgtcggcgtgcgtcttcagctggat 20467317
Query: 684 tgaggagcactgtaagcctcag 705
||||||||||||||||||||||
Sbjct: 20467316 tgaggagcactgtaagcctcag 20467295
Score = 216 bits (109), Expect = 2e-53
Identities = 109/109 (100%)
Strand = Plus / Minus
Query: 195 agatgacgaggacagcgattaccaccaggaatcctacaaggagtcctacaaggaccggcg 254
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20468839 agatgacgaggacagcgattaccaccaggaatcctacaaggagtcctacaaggaccggcg 20468780
Query: 255 gcggcgcgcgcacactcaggccgagcagaagaggagggatgccatcaag 303
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20468779 gcggcgcgcgcacactcaggccgagcagaagaggagggatgccatcaag 20468731
Score = 202 bits (102), Expect = 3e-49
Identities = 102/102 (100%)
Strand = Plus / Minus
Query: 302 agagaggctatgacgacctacagaccatcgtccccacctgccagcagcaggacttctcca 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20468504 agagaggctatgacgacctacagaccatcgtccccacctgccagcagcaggacttctcca 20468445
Query: 362 ttggctcccagaagctcagcaaggccatcgttctgcagaaga 403
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20468444 ttggctcccagaagctcagcaaggccatcgttctgcagaaga 20468403
Score = 200 bits (101), Expect = 1e-48
Identities = 101/101 (100%)
Strand = Plus / Minus
Query: 404 ccattgactacatccagtttttgcacaaagagaagaaaaagcaggaggaggaggtgtcca 463
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20468227 ccattgactacatccagtttttgcacaaagagaagaaaaagcaggaggaggaggtgtcca 20468168
Query: 464 cgttgcgcaaggacgtcatggccctaaagatcatgaaagtg 504
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 20468167 cgttgcgcaaggacgtcatggccctaaagatcatgaaagtg 20468127
Score = 180 bits (91), Expect = 1e-42
Identities = 91/91 (100%)
Strand = Plus / Minus
Query: 106 gggatttttgtagaaagcactcgcaagggaagtgtagtgtccagagctaatagcatcggt 165
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20469199 gggatttttgtagaaagcactcgcaagggaagtgtagtgtccagagctaatagcatcggt 20469140
Query: 166 tccaccagtgcctcttctgtccccaacacag 196
|||||||||||||||||||||||||||||||
Sbjct: 20469139 tccaccagtgcctcttctgtccccaacacag 20469109
Score = 135 bits (68), Expect = 5e-29
Identities = 68/68 (100%)
Strand = Plus / Minus
Query: 3 aggtttccggttcggtgggtcggagatgacggagccgggcgcctctcccgaggacccctg 62
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20470187 aggtttccggttcggtgggtcggagatgacggagccgggcgcctctcccgaggacccctg 20470128
Query: 63 ggtcaagg 70
||||||||
Sbjct: 20470127 ggtcaagg 20470120
Score = 79.8 bits (40), Expect = 3e-12
Identities = 40/40 (100%)
Strand = Plus / Minus
Query: 68 aggtggagtatgcctacagcgacaacagcctggaccccgg 107
||||||||||||||||||||||||||||||||||||||||
Sbjct: 20469734 aggtggagtatgcctacagcgacaacagcctggaccccgg 20469695
Database: Sscrofa_10.2.fasta
Posted date: Nov 16, 2011 10:34 AM
Number of letters in database: 2,808,509,378
Number of sequences in database: 4582
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4582
Number of Hits to DB: 28,569,727
Number of extensions: 293
Number of successful extensions: 293
Number of sequences better than 1.0e-05: 1
Number of HSP's gapped: 292
Number of HSP's successfully gapped: 8
Length of query: 1014
Length of database: 2,808,509,378
Length adjustment: 21
Effective length of query: 993
Effective length of database: 2,808,413,156
Effective search space: 2788754263908
Effective search space used: 2788754263908
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 18 (36.2 bits)
S2: 29 (58.0 bits)