Animal-Genome cDNA 20110601C-014101
Search to RefSeqCP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-014101
(1051 letters)
Database: RefSeq49_CP.fasta
33,336 sequences; 18,874,504 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_851699.1| PREDICTED: similar to membrane cofactor protein... 241 8e-64
Alignment gi|XP_537888.2| PREDICTED: similar to membrane cofactor protein... 156 6e-39
Alignment gi|XP_851638.1| PREDICTED: similar to decay accelerating factor... 147 2e-35
Alignment gi|XP_851667.1| PREDICTED: similar to complement component (3b/... 143 3e-34
Alignment gi|XP_547388.2| PREDICTED: similar to complement component (3d/... 130 3e-30
Alignment gi|XP_532030.2| PREDICTED: similar to sushi, von Willebrand fac... 92 8e-19
Alignment gi|XP_850060.1| PREDICTED: similar to CUB and Sushi multiple do... 89 5e-18
Alignment gi|XP_857918.1| PREDICTED: similar to Complement factor H precu... 86 8e-17
Alignment gi|XP_857879.1| PREDICTED: similar to Complement factor H precu... 86 8e-17
Alignment gi|XP_857842.1| PREDICTED: similar to complement component fact... 86 8e-17
>ref|XP_851699.1| PREDICTED: similar to membrane cofactor protein isoform 12
precursor [Canis familiaris].
Length = 365
Score = 241 bits (615), Expect = 8e-64
Identities = 118/236 (50%), Positives = 154/236 (65%), Gaps = 3/236 (1%)
Frame = +1
Query: 106 MMAFCALRKALPCRPENPFSSRCFVEILWVSLALVFLLPMPSDACDEPPKFESMRPQVLN 285
M A A R PC P +P S + L L L+ L DACD P + SM+P V
Sbjct: 1 MTASRAPRTRGPCCPLSPSCSPRCSQPLRGFLMLLLLHSWVVDACDRPA-YISMKPNVSK 59
Query: 286 TTYRPGDRVEYECRPGFRPMVPALPTSSVCQDDNTWSPLQEACRRKACSNLPDPLNGQVS 465
+ PGD + + C G+RP+ P LP SSVCQ DNTW+PL+E C +K+C + +P NGQV
Sbjct: 60 MNFDPGDTIFFTCNLGYRPIRPLLPMSSVCQPDNTWTPLKEGCTKKSCLHPGEPSNGQVV 119
Query: 466 YPNGDTLFGSKAQFTCNTGFYIIGAETVYCQVSG---NVMAWSEPSPLCEKILCKPPGEI 636
+ LFGSK Q++CN GF ++G + +YC++S N + WS+ PLC KILC+PPG+I
Sbjct: 120 LVDESLLFGSKIQYSCNEGFRLVGQKNLYCEISSTDSNRVVWSDDPPLCTKILCQPPGKI 179
Query: 637 PNGKYTNSHKDVFEYNEVVTYSCLSSTGPDEFSLVGESSLFCIGKDEWSSDPPECK 804
NGKY++SHKD FEYNEVVTYSC S G DE+SL+G++ L C G EWSS+PPECK
Sbjct: 180 ENGKYSDSHKDEFEYNEVVTYSCEKSQGTDEYSLIGDNKLICSGDGEWSSNPPECK 235
>ref|XP_537888.2| PREDICTED: similar to membrane cofactor protein isoform 14
precursor [Canis familiaris].
Length = 371
Score = 156 bits (395), Expect(2) = 6e-39
Identities = 93/267 (34%), Positives = 138/267 (51%), Gaps = 34/267 (12%)
Frame = +1
Query: 106 MMAFCALRKALPCRPENPFSSRCFVEILWVSLALVFLL--------------------PM 225
M A A R PC PE FS R V IL V+ L+ L +
Sbjct: 1 MKASRAPRTCCPCCPEKRFSWR-LVGILLVAPVLLLSLNCGKSLERLCPLALSWSGSGEL 59
Query: 226 PSDACDEPPKFESMR-PQVLNTTYRPGDRVEYECRPGFRPMVPALPTSSVCQDDNTWSPL 402
AC EPPK++SM +L Y G+++ Y+C PG+ P S+ C+ +++W P+
Sbjct: 60 AGYACGEPPKYDSMTLKSILKNYYAVGEKIFYKCNPGY---YITFPVSTYCEKNHSWFPI 116
Query: 403 QEACRRKACS-NLPDP--LNGQVSY------PNGDTLFGSKAQFTC----NTGFYIIGAE 543
E C + + N DP L +V + P + + +C +++ G
Sbjct: 117 PEGCSKAEFNDNSTDPQCLEDRVPFAPPPLTPKTASKLLQEQIHSCLQWVGDAYHLEGEA 176
Query: 544 TVYCQVSGNVMAWSEPSPLCEKILCKPPGEIPNGKYTNSHKDVFEYNEVVTYSCLSSTGP 723
+ C + G+ + WS+ P CEKI C+PP +I NGK+TNSH+ +FEYNE++T+SC G
Sbjct: 177 ILTCNLQGDEVYWSDEFPQCEKIYCQPPAKIKNGKHTNSHRTIFEYNELITFSCNRLKGS 236
Query: 724 DEFSLVGESSLFCIGKDEWSSDPPECK 804
D++SLVGE L CI K++WSS PP+CK
Sbjct: 237 DQYSLVGERELTCIEKNKWSSRPPQCK 263
Score = 23.5 bits (49), Expect(2) = 6e-39
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +2
Query: 791 PLSVKVVKCPYPVL 832
P KVVKC YPV+
Sbjct: 259 PPQCKVVKCDYPVI 272
>ref|XP_851638.1| PREDICTED: similar to decay accelerating factor for complement
(CD55, Cromer blood group system) [Canis familiaris].
Length = 388
Score = 147 bits (371), Expect = 2e-35
Identities = 88/234 (37%), Positives = 125/234 (53%), Gaps = 6/234 (2%)
Frame = +1
Query: 235 ACDEPPK--FESMRPQVLNTTYRP-GDRVEYECRPGFRPMVPALPTSSVCQDDNTWSPLQ 405
+CD P + F +++ Y P G VEYECRPG+R +L C + WS
Sbjct: 128 SCDVPTRLLFATLKKSFSQQNYFPEGSVVEYECRPGYRRDY-SLSEKLTCLKNFKWSKPD 186
Query: 406 EACRRKACSNLPDPLNGQVSYPNGDTLFGSKAQFTCNTGFYIIGAETVYCQVSGNVMAWS 585
E C++K+C N D +G V+ PN D LFGS F+CN G+ ++GA + YC ++ N + WS
Sbjct: 187 EFCKKKSCPNPGDLRHGHVTIPN-DILFGSSISFSCNVGYRLVGAISSYCVLADNSVEWS 245
Query: 586 EPSPLCEKILCKPPGEIPNGKYTNSHKDVFEYNEVVTYSCLSSTGPDEFSLVGESSLFCI 765
+P P C++I C P EI NG + K + Y + V Y C F+L+GE+S++C
Sbjct: 246 DPLPECQEIFCPDPPEISNGLIYDPQK-TYVYQQSVKYKCTIG-----FTLIGENSIYCT 299
Query: 766 GKD---EWSSDPPECKGSQMSISSTPHL*LLVSTLDKNFTTKVKSAVLSMLASP 918
KD EWS PPEC+GSQ S + TP + N K SAV ++P
Sbjct: 300 VKDDQGEWSGPPPECRGSQTS-TVTPG---FQKSTTANVPAKQSSAVPRATSTP 349
>ref|XP_851667.1| PREDICTED: similar to complement component (3b/4b) receptor 1
isoform F precursor [Canis familiaris].
Length = 558
Score = 143 bits (360), Expect = 3e-34
Identities = 72/209 (34%), Positives = 116/209 (55%), Gaps = 9/209 (4%)
Frame = +1
Query: 202 ALVFLLPMPS--DACDEPPKFESMRP-QVLNTTYRP-GDRVEYECRPGFRPMVPALPTSS 369
A + LL +P C P + +P ++ N + P G ++YECRPG++ V S
Sbjct: 35 AFLVLLALPEAWGQCKAPEQLPFAKPLRLFNESEFPIGTSIKYECRPGYQKRV----FSM 90
Query: 370 VCQDDNTWSPLQEACRRKACSNLPDPLNGQVSYPNGDTLFGSKAQFTCNTGFYIIGAETV 549
C ++ WS ++ C+RK+C P+ LNG+++ +GD FGS + CN G+ +IG ++
Sbjct: 91 KCLQNSVWSSIENMCKRKSCGTPPELLNGKLTV-DGDARFGSTVHYACNVGYQLIGHSSI 149
Query: 550 YCQVSGNVMAWSEPSPLCEKILCKPPGEIPNGKYTNSHKDVFEYNEVVTYSC-LSSTGPD 726
C +S N + W + P+CE I C+PP +I NG + +++++ F Y VVTY C G
Sbjct: 150 SCIISDNTVVWDDDPPICETIHCEPPPDIANGDFLSTNREYFPYATVVTYRCNTGHRGEK 209
Query: 727 EFSLVGESSLFCIGKDE----WSSDPPEC 801
+ LVG S++C +D WS PP+C
Sbjct: 210 LYELVGNPSIYCTSEDNRVGTWSDLPPQC 238
Score = 113 bits (282), Expect = 3e-25
Identities = 68/202 (33%), Positives = 94/202 (46%), Gaps = 7/202 (3%)
Frame = +1
Query: 217 LPMPSDACDEPPKFESMRPQVLNT-TYRPGDRVEYECRPGFRPMVPALPTSSVCQDDNTW 393
LP + AC PP+ + N ++ PG V Y C PG+ A S C W
Sbjct: 296 LPSCTRACQAPPEIFHGKHSARNKDSFAPGQEVFYSCEPGYELQGAA---SLRCTPQGDW 352
Query: 394 SPLQEACRRKACSNLPDPL-NGQVSYPNGDTLFGSKAQFTCNTGFYIIGAETVYCQVSGN 570
SP C K+C++ D L NG V +P L G+K F C+ GF + G+ YC + G
Sbjct: 353 SPAAPRCEGKSCADFLDQLPNGHVLFPISLQL-GAKVSFVCDEGFRLQGSSASYCVLVGT 411
Query: 571 VMAWSEPSPLCEKILCKPPGEIPNGKYTNSHKDVFEYNEVVTYSC-LSSTGPDEFSLVGE 747
W+ P+CE+I C P I NG +T + Y + +TY+C T F L+GE
Sbjct: 412 ESLWNNSVPVCEQIFCPNPPSILNGHHTGTSWGRIPYGKEITYTCDHHPTRGMIFKLIGE 471
Query: 748 SSLFCI----GKDEWSSDPPEC 801
S++FC G WS P C
Sbjct: 472 STIFCTSDNQGNGIWSGPAPHC 493
Score = 70.1 bits (170), Expect = 3e-12
Identities = 59/199 (29%), Positives = 78/199 (39%), Gaps = 9/199 (4%)
Frame = +1
Query: 238 CDEPPKFESMRPQVLNTTYRP-GDRVEYECRPGFRPM----VPALPTSSVCQDDN---TW 393
C+ PP + N Y P V Y C G R + P+ +DN TW
Sbjct: 172 CEPPPDIANGDFLSTNREYFPYATVVTYRCNTGHRGEKLYELVGNPSIYCTSEDNRVGTW 231
Query: 394 SPLQEACRRKACSNLPDPLNGQVSYPNGDTLF-GSKAQFTCNTGFYIIGAETVYCQVSGN 570
S L C PD N N F +F C GF + G VYCQ
Sbjct: 232 SDLPPQCIVLNRCTPPDIENAIRISENKSLFFLYETVRFICKPGFVMEGPSNVYCQRQNK 291
Query: 571 VMAWSEPSPLCEKILCKPPGEIPNGKYTNSHKDVFEYNEVVTYSCLSSTGPDEFSLVGES 750
W P C + C+ P EI +GK++ +KD F + V YSC + L G +
Sbjct: 292 ---WGPELPSCTRA-CQAPPEIFHGKHSARNKDSFAPGQEVFYSCEPG-----YELQGAA 342
Query: 751 SLFCIGKDEWSSDPPECKG 807
SL C + +WS P C+G
Sbjct: 343 SLRCTPQGDWSPAAPRCEG 361
>ref|XP_547388.2| PREDICTED: similar to complement component (3d/Epstein Barr virus)
receptor 2 isoform 1 [Canis familiaris].
Length = 1661
Score = 130 bits (326), Expect = 3e-30
Identities = 70/210 (33%), Positives = 108/210 (51%), Gaps = 7/210 (3%)
Frame = +1
Query: 193 VSLALVFLLPMPSDACDEPPKFESMRPQVLN--TTYRPGDRVEYECRPGFRPMVPALPTS 366
+S A+ FL + C P++ +P++ + + + G EYEC PG+ S
Sbjct: 226 LSFAVAFLHQYSNRQCKFLPRYPFAKPKLQSDLSEFAIGTSWEYECLPGYIKG----SFS 281
Query: 367 SVCQDDNTWSPLQEACRRKACSNLPDPLNGQVSYPNGDTLFGSKAQFTCNTGFYIIGAET 546
C + WS +Q+ C+RK+C + + L+G V G +FGS ++C+ G+ +IG +
Sbjct: 282 VTCLQSSKWSDVQQPCQRKSCRSPGELLHGSVLITTG-VVFGSTITYSCDKGYRLIGDSS 340
Query: 547 VYCQVSGNVMAWSEPSPLCEKILCKPPGEIPNGKYTNSHKDVFEYNEVVTYSC-LSSTGP 723
C +S N + W P CE I C+PP I NG + +S ++ F Y VVTY C G
Sbjct: 341 ATCIISDNTVTWDRDMPFCESIPCEPPPAISNGDFYSSSREDFFYGMVVTYKCHAGQNGK 400
Query: 724 DEFSLVGESSLFCIGKDE----WSSDPPEC 801
F L+GE S++C KD WS PP+C
Sbjct: 401 KLFDLLGEKSIYCTSKDNRVGIWSGPPPQC 430
Score = 100 bits (249), Expect = 2e-21
Identities = 59/174 (33%), Positives = 84/174 (48%), Gaps = 6/174 (3%)
Frame = +1
Query: 301 GDRVEYECRPGFRPMVPALPTSSV-CQDDNTWSPLQEACRRKACSNLPDPL-NGQVSYPN 474
G V Y C PG+ L T+++ C TWS C K+C +P+ L NG V P
Sbjct: 517 GQEVSYSCDPGYT----LLGTNTMQCTSLGTWSHTAPKCEAKSCDAIPNQLLNGHVVAPP 572
Query: 475 GDTLFGSKAQFTCNTGFYIIGAETVYCQVSGNVMAWSEPSPLCEKILCKPPGEIPNGKYT 654
L G++ F C+ G+ + G + C G + W+ P+CE+I C+PP I NG ++
Sbjct: 573 NFQL-GAEVSFVCDKGYRLNGQSSSQCVSEGMSVLWNNKFPVCEQIRCEPPPPIKNG-WS 630
Query: 655 NSHKDVFEYNEVVTYSCLSSTGPDEFSLVGESSLFCIGKDE----WSSDPPECK 804
D N V Y C ++ F L+GE LFCI KD+ W PP C+
Sbjct: 631 GHSSDPVPLNTAVKYKCFNA-----FRLIGERLLFCISKDQVRGIWDKPPPTCE 679
Score = 95.9 bits (237), Expect = 6e-20
Identities = 63/214 (29%), Positives = 96/214 (44%), Gaps = 8/214 (3%)
Frame = +1
Query: 217 LPMPSDACDEPPKFESMRPQVLNTT-YRPGDRVEYECRPGFRPMVPALPTSSVCQDDNTW 393
+P+ C PPK + R + + + PG ++Y C PG+ V S +C + W
Sbjct: 1000 VPVCEKECQAPPKILNGRKEDRHLVRFDPGTSIKYSCDPGY---VLVGKESILCTSEGVW 1056
Query: 394 SPLQEACRRKACSNLPDPLNGQVSYPNGDTLFGSKAQFTCNTGFYIIGAETVYCQVSGNV 573
+P C+ C P+ QV + +C+ G+ + G+ CQ
Sbjct: 1057 TPTVPECKVAECK----PIGNQVFDKPQNGFIRPDVNSSCDEGYRLGGSVYQSCQ---GA 1109
Query: 574 MAWSEPSPLCEKILCKPPGEIPNGKYTNSHKDVFEYNEVVTYSCLSSTGPD---EFSLVG 744
+ W LCE I C PP I NGK+T S + Y +VTY+C + GP+ +F+LVG
Sbjct: 1110 IPWFMEIRLCEDITCPPPPVIYNGKHTGSSSENVPYGTMVTYTC--NPGPESGVKFNLVG 1167
Query: 745 ESSLFCIGKDE----WSSDPPECKGSQMSISSTP 834
ES++ C D+ WS P CK S + P
Sbjct: 1168 ESTIHCTSNDQEMGTWSGPAPFCKLSLPTFQCPP 1201
Score = 95.1 bits (235), Expect = 1e-19
Identities = 54/189 (28%), Positives = 91/189 (48%), Gaps = 7/189 (3%)
Frame = +1
Query: 289 TYRPGDRVEYECRPGFRPMVPALPTSSVCQDDNTWSPLQEACRRKACSNLPDPLNGQVSY 468
++ PG V Y C PG+ + + C W+ + C+ C LNGQ+
Sbjct: 769 SFAPGLSVTYSCEPGY---LLVGEKTIRCLSSGKWNAVIPTCKEAQCEPPGPFLNGQIKG 825
Query: 469 PNGDTLFGSKAQFTCNTGFYIIGAETVYCQVSGNVMAWSEPSPLCEKILCKPPGEIPNGK 648
P + G+ F CN G+ + G + C ++G +W++ P+C++ILC PP I NG+
Sbjct: 826 PPSLRV-GATLNFDCNEGYRLQGQPSSRCVIAGQQASWTK-MPVCKEILCPPPPSILNGR 883
Query: 649 YTNSHKDVFEYNEVVTYSCLSSTGPDE---FSLVGESSLFCIGKDE----WSSDPPECKG 807
+T S Y +V Y+C + P+E F L+GE +++C + WS+ P C+
Sbjct: 884 HTGSPSGNVPYGSIVIYTC--NPDPEEGVRFILMGEKTIYCTADSQKIGIWSAPAPRCEL 941
Query: 808 SQMSISSTP 834
S ++ P
Sbjct: 942 SSSAVHCPP 950
Score = 79.3 bits (194), Expect = 6e-15
Identities = 55/210 (26%), Positives = 94/210 (44%), Gaps = 13/210 (6%)
Frame = +1
Query: 214 LLPMPSDACDEPPKFESMRPQVLNT-TYRPGDRVEYECRPGFRPMVPALPTSSVCQDDNT 390
++P +A EPP + Q+ + R G + ++C G+R + +
Sbjct: 803 VIPTCKEAQCEPPG-PFLNGQIKGPPSLRVGATLNFDCNEGYRLQGQPSSRCVIAGQQAS 861
Query: 391 WSPLQEACRRKACSNLPDPLNGQ-VSYPNGDTLFGSKAQFTCNTG------FYIIGAETV 549
W+ + C+ C P LNG+ P+G+ +GS +TCN F ++G +T+
Sbjct: 862 WTKMP-VCKEILCPPPPSILNGRHTGSPSGNVPYGSIVIYTCNPDPEEGVRFILMGEKTI 920
Query: 550 YCQV-SGNVMAWSEPSPLCE----KILCKPPGEIPNGKYTNSHKDVFEYNEVVTYSCLSS 714
YC S + WS P+P CE + C PP +I G+ + K+ + YN+ V ++C
Sbjct: 921 YCTADSQKIGIWSAPAPRCELSSSAVHCPPP-QILRGQISWGQKEQYSYNDTVVFACTFG 979
Query: 715 TGPDEFSLVGESSLFCIGKDEWSSDPPECK 804
FSL G ++ C + W P C+
Sbjct: 980 -----FSLKGSKAIRCNAQGTWEPSVPVCE 1004
Score = 70.5 bits (171), Expect = 3e-12
Identities = 48/179 (26%), Positives = 76/179 (42%), Gaps = 11/179 (6%)
Frame = +1
Query: 301 GDRVEYECRPGFRPMVP-------ALPTSSVCQDDNTWSPLQEACRRKACSNLPDPL--- 450
G V Y C PG V + +S Q+ TWS C+ + P+
Sbjct: 1146 GTMVTYTCNPGPESGVKFNLVGESTIHCTSNDQEMGTWSGPAPFCKLSLPTFQCPPVYVA 1205
Query: 451 NG-QVSYPNGDTLFGSKAQFTCNTGFYIIGAETVYCQVSGNVMAWSEPSPLCEKILCKPP 627
NG ++S + F CN GF + G+ + C+ + W P+CEK C+PP
Sbjct: 1206 NGYKISGKEAPYFYNDSVAFKCNRGFTLKGSSKIRCKANNT---WDPEIPVCEKD-CQPP 1261
Query: 628 GEIPNGKYTNSHKDVFEYNEVVTYSCLSSTGPDEFSLVGESSLFCIGKDEWSSDPPECK 804
+ +G++T ++ +F V Y+C + LVG S+ C+ WS PP C+
Sbjct: 1262 FGLQHGRHTGGNRVLFVSGMTVDYTC-----DPGYLLVGNKSIHCMPSGTWSPSPPRCE 1315
Score = 67.4 bits (163), Expect = 2e-11
Identities = 52/207 (25%), Positives = 80/207 (38%), Gaps = 10/207 (4%)
Frame = +1
Query: 214 LLPMPSDACDEPPKFESMRPQVLNTTYRPGDRVEYECRPGFRPMVPALPTSSV--CQDDN 387
L P P C P + + +Y D V + C GF + S V C +N
Sbjct: 1436 LKPPPVTHCPNPEVKHGYKLNKTHASYAHNDTVYFACNAGF-----IMNGSHVIQCHTNN 1490
Query: 388 TWSPLQEACRRKACSNLPDPLNGQVSYPNGDTLFGSKAQFT--------CNTGFYIIGAE 543
W P C +KA PL PNG+ G A+F+ C+ G+ ++G
Sbjct: 1491 KWMPGVPTCIKKAFIGCQLPLK----IPNGNHTGGDIARFSPGMSILYNCDQGYLLVGVA 1546
Query: 544 TVYCQVSGNVMAWSEPSPLCEKILCKPPGEIPNGKYTNSHKDVFEYNEVVTYSCLSSTGP 723
+ C G WS+P+P C+++ C P I + +++Y VVT C
Sbjct: 1547 LLLCTHDGT---WSQPAPYCKEVNCSSPEYINGIQKGLEPGKMYQYGAVVTLEC-----E 1598
Query: 724 DEFSLVGESSLFCIGKDEWSSDPPECK 804
+ ++L G C W+ CK
Sbjct: 1599 EGYTLEGSPQSQCQDDHGWNPPLAVCK 1625
Score = 67.0 bits (162), Expect = 3e-11
Identities = 60/207 (28%), Positives = 82/207 (39%), Gaps = 15/207 (7%)
Frame = +1
Query: 238 CDEPPKFE------SMRPQVLNTTYRPGDRVEYECRPGFRPMVPALPTS-SVCQDDNTWS 396
C+ PP + S P LNT V+Y+C FR + L S Q W
Sbjct: 619 CEPPPPIKNGWSGHSSDPVPLNTA------VKYKCFNAFRLIGERLLFCISKDQVRGIWD 672
Query: 397 PLQEAC----RRKACSNLPDPLNGQVSYPNGDTLFGSKAQFTCNTGFYIIGAETVYCQVS 564
C R C P + G FTCNT F + G ++V+CQ +
Sbjct: 673 KPPPTCEYYNRYSVCPEPTVPGGYRDKRSRPPYRHGDSVTFTCNTNFTMKGNKSVWCQAN 732
Query: 565 GNVMAWS-EPSPLCEK---ILCKPPGEIPNGKYTNSHKDVFEYNEVVTYSCLSSTGPDEF 732
W P P CE + C P IPNG +T + F VTYSC +
Sbjct: 733 ---KTWGPTPLPTCESDFPLECPPLPMIPNGYHTGEMVESFAPGLSVTYSC-----EPGY 784
Query: 733 SLVGESSLFCIGKDEWSSDPPECKGSQ 813
LVGE ++ C+ +W++ P CK +Q
Sbjct: 785 LLVGEKTIRCLSSGKWNAVIPTCKEAQ 811
Score = 65.5 bits (158), Expect = 8e-11
Identities = 50/179 (27%), Positives = 75/179 (41%), Gaps = 11/179 (6%)
Frame = +1
Query: 301 GDRVEYECRP----GFRPMVPALPTSSVCQDDNT---WSPLQEACRRKACS-NLPDP--L 450
G V Y C P G R ++ T D WS C + + + P P L
Sbjct: 895 GSIVIYTCNPDPEEGVRFILMGEKTIYCTADSQKIGIWSAPAPRCELSSSAVHCPPPQIL 954
Query: 451 NGQVSYPNGDTL-FGSKAQFTCNTGFYIIGAETVYCQVSGNVMAWSEPSPLCEKILCKPP 627
GQ+S+ + + F C GF + G++ + C G W P+CEK C+ P
Sbjct: 955 RGQISWGQKEQYSYNDTVVFACTFGFSLKGSKAIRCNAQGT---WEPSVPVCEKE-CQAP 1010
Query: 628 GEIPNGKYTNSHKDVFEYNEVVTYSCLSSTGPDEFSLVGESSLFCIGKDEWSSDPPECK 804
+I NG+ + H F+ + YSC + LVG+ S+ C + W+ PECK
Sbjct: 1011 PKILNGRKEDRHLVRFDPGTSIKYSC-----DPGYVLVGKESILCTSEGVWTPTVPECK 1064
Score = 64.7 bits (156), Expect = 1e-10
Identities = 51/177 (28%), Positives = 72/177 (40%), Gaps = 10/177 (5%)
Frame = +1
Query: 301 GDRVEYECRPGFRPMVPALPTSSV-CQDDNTWSPLQEACRRKACSNLPD-----PLNGQV 462
G V+Y C PG+ + S+ C TWSP C C + D P+ V
Sbjct: 1280 GMTVDYTCDPGYL----LVGNKSIHCMPSGTWSPSPPRCEAP-CQPVRDDFQELPIQSPV 1334
Query: 463 SYPNGDTLFGSKAQFTCNTGFYIIGAETVYCQVSGNVMAWSEPSPLCEKILCKPPGEIPN 642
N +C G+ + G CQ + N W + PLC+ I C+PP I +
Sbjct: 1335 IPVNT----------SCQDGYRLTGHAYQKCQDAEN-RVWFQKIPLCKVIHCEPPPMIEH 1383
Query: 643 GKYTNSHKDVFEYNEVVTYSCLSSTGPDEFSLVGESSLFCI----GKDEWSSDPPEC 801
G+ + F Y V+Y C FSL+GE ++ CI G WS P+C
Sbjct: 1384 GRPRGVMAEHFLYGNEVSYEC-----DQGFSLLGEKNIRCISDPKGHGSWSKPLPQC 1435
Score = 60.8 bits (146), Expect = 2e-09
Identities = 41/144 (28%), Positives = 62/144 (43%), Gaps = 6/144 (4%)
Frame = +1
Query: 391 WSPLQEACRRKACSNLPDPLNGQV------SYPNGDTLFGSKAQFTCNTGFYIIGAETVY 552
WS C +P+ NG + SY DT+ F C GF + G+ V+
Sbjct: 423 WSGPPPQCIPLVKCPIPEVENGIIESGFGRSYSLNDTVI-----FRCKPGFTMKGSNIVW 477
Query: 553 CQVSGNVMAWSEPSPLCEKILCKPPGEIPNGKYTNSHKDVFEYNEVVTYSCLSSTGPDEF 732
CQ + W P P C K PP + +G Y N K+ F + V+YSC +
Sbjct: 478 CQPNSK---WDPPLPSCFKGCLLPP-HVNHGSYNNLDKEFFTIGQEVSYSC-----DPGY 528
Query: 733 SLVGESSLFCIGKDEWSSDPPECK 804
+L+G +++ C WS P+C+
Sbjct: 529 TLLGTNTMQCTSLGTWSHTAPKCE 552
Score = 59.3 bits (142), Expect = 6e-09
Identities = 52/203 (25%), Positives = 85/203 (41%), Gaps = 9/203 (4%)
Frame = +1
Query: 223 MPSDACDEPPKFESMRPQVLNTTYRPGDRVEYECRPGFRPMVPALPTSSV--CQDDNTWS 396
+P C P + +Y D V + C+PGF + S++ CQ ++ W
Sbjct: 431 IPLVKCPIPEVENGIIESGFGRSYSLNDTVIFRCKPGF-----TMKGSNIVWCQPNSKWD 485
Query: 397 PLQEACRRKACSNLPDPLNGQVSYPNGDTLF---GSKAQFTCNTGFYIIGAETVYCQVSG 567
P +C K C P +G SY N D F G + ++C+ G+ ++G T+ C G
Sbjct: 486 PPLPSC-FKGCLLPPHVNHG--SYNNLDKEFFTIGQEVSYSCDPGYTLLGTNTMQCTSLG 542
Query: 568 NVMAWSEPSPLCEKILCKP-PGEIPNGKYTNSHKDVFEYNEVVTYSCLSSTGPDEFSLVG 744
WS +P CE C P ++ NG F+ V++ C + L G
Sbjct: 543 ---TWSHTAPKCEAKSCDAIPNQLLNGHVVAPPN--FQLGAEVSFVC-----DKGYRLNG 592
Query: 745 ESSLFCIGKDE---WSSDPPECK 804
+SS C+ + W++ P C+
Sbjct: 593 QSSSQCVSEGMSVLWNNKFPVCE 615
>ref|XP_532030.2| PREDICTED: similar to sushi, von Willebrand factor type A, EGF and
pentraxin domain containing 1 [Canis familiaris].
Length = 3569
Score = 92.0 bits (227), Expect = 8e-19
Identities = 58/185 (31%), Positives = 82/185 (44%)
Frame = +1
Query: 247 PPKFESMRPQVLNTTYRPGDRVEYECRPGFRPMVPALPTSSVCQDDNTWSPLQEACRRKA 426
PP S ++ G V+Y C GF + PT+S CQ D TWS C
Sbjct: 2382 PPPLISFGVPAPSSALHFGSTVKYSCVDGF--FLRGDPTTS-CQADGTWSSPLPECVPVE 2438
Query: 427 CSNLPDPLNGQVSYPNGDTLFGSKAQFTCNTGFYIIGAETVYCQVSGNVMAWSEPSPLCE 606
C + + LNG + + S A +TC GF ++G T+ C +G W P C+
Sbjct: 2439 CPHPEEILNGIIDVQG--LAYLSTALYTCKPGFELVGNTTILCGENGQ---WLGGKPTCK 2493
Query: 607 KILCKPPGEIPNGKYTNSHKDVFEYNEVVTYSCLSSTGPDEFSLVGESSLFCIGKDEWSS 786
+ C P EI NGK++ +H Y + +TYSC F L G +L C+ +W
Sbjct: 2494 PVECPKPREISNGKFSYTH---LHYGQTITYSCRRG-----FRLEGPKALTCLETGDWDM 2545
Query: 787 DPPEC 801
D P C
Sbjct: 2546 DVPSC 2550
Score = 86.3 bits (212), Expect = 5e-17
Identities = 55/170 (32%), Positives = 75/170 (44%)
Frame = +1
Query: 292 YRPGDRVEYECRPGFRPMVPALPTSSVCQDDNTWSPLQEACRRKACSNLPDPLNGQVSYP 471
Y G +V + C+ G++ +V A T C + WS L C C P NG +
Sbjct: 1804 YTLGAKVTFSCKEGYQ-LVGA--TKITCLESGEWSDLLPYCEAVFCGVPAIPENGDIDVS 1860
Query: 472 NGDTLFGSKAQFTCNTGFYIIGAETVYCQVSGNVMAWSEPSPLCEKILCKPPGEIPNGKY 651
+ +GSK + CN G+ + GA+ C SG+ WS P+CE + C P I NGKY
Sbjct: 1861 S--FTYGSKVTYRCNKGYTLNGAKESSCLASGS---WSHSLPVCELVKCSSPESINNGKY 1915
Query: 652 TNSHKDVFEYNEVVTYSCLSSTGPDEFSLVGESSLFCIGKDEWSSDPPEC 801
S Y +YSC S +SL G S + C W PP C
Sbjct: 1916 ILSG---LTYLSTASYSCESG-----YSLQGPSVIECSASGSWDRAPPTC 1957
Score = 79.7 bits (195), Expect = 4e-15
Identities = 55/191 (28%), Positives = 79/191 (41%), Gaps = 5/191 (2%)
Frame = +1
Query: 238 CDEPPKFE-SMRPQVLNTTYRPGDRVEYECRPGFRPMVPALPTSSV--CQDDNTW--SPL 402
C++PP S+ V + G V ++C GF L TS+ C W SP+
Sbjct: 2082 CEKPPSVSYSILESVSKAKFAAGSVVSFKCMEGF-----VLNTSAKIECLKGGQWNPSPM 2136
Query: 403 QEACRRKACSNLPDPLNGQVSYPNGDTLFGSKAQFTCNTGFYIIGAETVYCQVSGNVMAW 582
C C P +NG S N FG+ ++CN GFYI G + C+ +G W
Sbjct: 2137 SIQCIPVRCGEPPSIMNGYASGTNYS--FGAMVAYSCNKGFYIKGEKKSTCEATGQ---W 2191
Query: 583 SEPSPLCEKILCKPPGEIPNGKYTNSHKDVFEYNEVVTYSCLSSTGPDEFSLVGESSLFC 762
S P+P C + C P ++ NG ++ +FE V Y C + VG C
Sbjct: 2192 SSPTPTCHPVSCNEPPKVENGFLEHTTGRIFE--SEVRYQCNPG-----YKSVGSPVFVC 2244
Query: 763 IGKDEWSSDPP 795
W S+ P
Sbjct: 2245 QANRHWHSESP 2255
Score = 79.3 bits (194), Expect = 6e-15
Identities = 50/190 (26%), Positives = 78/190 (41%)
Frame = +1
Query: 235 ACDEPPKFESMRPQVLNTTYRPGDRVEYECRPGFRPMVPALPTSSVCQDDNTWSPLQEAC 414
+C +P M V + Y + Y+C PG+ V P CQ +N W + C
Sbjct: 2772 SCPKPNPI--MNGSVKGSNYTYLSVLYYQCNPGY---VLNGPERRTCQQNNKWDESEPTC 2826
Query: 415 RRKACSNLPDPLNGQVSYPNGDTLFGSKAQFTCNTGFYIIGAETVYCQVSGNVMAWSEPS 594
C + P NGQV F + ++TCN GF++ G + C G+ WS +
Sbjct: 2827 SPVDCGSPPISANGQVK--GNQYTFQKEIEYTCNVGFFLEGDRSRVCLADGH---WSGTT 2881
Query: 595 PLCEKILCKPPGEIPNGKYTNSHKDVFEYNEVVTYSCLSSTGPDEFSLVGESSLFCIGKD 774
P+C + C P ++ NG + + + V + C D + L G L C
Sbjct: 2882 PICVPVRCVTPPQVANGVMDGLD---YGFGKEVVFHC-----QDGYMLHGAPKLTCQSDG 2933
Query: 775 EWSSDPPECK 804
W ++ P CK
Sbjct: 2934 NWDAEFPSCK 2943
Score = 75.5 bits (184), Expect = 8e-14
Identities = 51/203 (25%), Positives = 83/203 (40%), Gaps = 2/203 (0%)
Frame = +1
Query: 199 LALVFLLPMPSDACDEPPKFESMR--PQVLNTTYRPGDRVEYECRPGFRPMVPALPTSSV 372
+ + +L P P +E+ + P + + G V Y C PG+ + + +
Sbjct: 2640 MEIPYLTPRPPHHMAAVATWENTKGSPATHSANFPYGTIVSYTCNPGYELLGSPM---LI 2696
Query: 373 CQDDNTWSPLQEACRRKACSNLPDPLNGQVSYPNGDTLFGSKAQFTCNTGFYIIGAETVY 552
CQ+D TW+ +C C P NG + + +T G+ Q+ C G ++G++ +
Sbjct: 2697 CQEDGTWNGSAPSCISIECDLPVAPENGFLHFT--ETTMGNAVQYICKPGHILLGSDMRF 2754
Query: 553 CQVSGNVMAWSEPSPLCEKILCKPPGEIPNGKYTNSHKDVFEYNEVVTYSCLSSTGPDEF 732
C + WS SP CE I C P I NG S+ + Y V+ Y C +
Sbjct: 2755 CLQNRE---WSGTSPRCEAISCPKPNPIMNGSVKGSN---YTYLSVLYYQCNPG-----Y 2803
Query: 733 SLVGESSLFCIGKDEWSSDPPEC 801
L G C ++W P C
Sbjct: 2804 VLNGPERRTCQQNNKWDESEPTC 2826
Score = 73.9 bits (180), Expect = 2e-13
Identities = 62/197 (31%), Positives = 88/197 (44%), Gaps = 1/197 (0%)
Frame = +1
Query: 301 GDRVEYECRPGFRPMVPALPTSSVCQDDNTWSPLQEACRRKACSNLPDPLNGQVSYPNGD 480
G ++Y+C PG++ + P S C D +WS +C CS P NG V+ D
Sbjct: 2966 GGHIQYQCFPGYK--LYGSP-SRRCLSDGSWSGSPPSCLPCRCST-PVIQNGAVN--GTD 3019
Query: 481 TLFGSKAQFTCNTGFYIIGAETVYCQVSGNVMAWSEPSPLCEKILCKPPGEIPNGKYTNS 660
G AQ C GF + G + C+ + WS P CE C P IPN + S
Sbjct: 3020 FGCGKVAQIQCFKGFKLHGVSEITCEANDQ---WSSGFPRCEHTSCGSPPVIPNAFISES 3076
Query: 661 HKDVFEYNEVVTYSCLSSTGPDEFSLVGESSLFCIGKDEWSSDPPECKGSQMSISSTPHL 840
E N V+TY+C S + + G S L C K WS P C+ +S S P +
Sbjct: 3077 GS--LEEN-VITYNCRSG-----YVIQGSSDLVCTEKGTWSQPYPACE--PLSCGSPPSV 3126
Query: 841 *LLVSTLDKN-FTTKVK 888
V+T + + + +KVK
Sbjct: 3127 ANAVATGEAHVYESKVK 3143
Score = 72.8 bits (177), Expect = 5e-13
Identities = 57/242 (23%), Positives = 91/242 (37%), Gaps = 43/242 (17%)
Frame = +1
Query: 238 CDEPPKFESMRPQVLNTTY--RPGDRVEYECRPGFRPMVPALPTSSVCQDDNTWSPLQEA 411
C + P E + P + T+ +PG ++ C PGF+ + + C + W+
Sbjct: 1627 CSDCPPLEGLIPHLRTTSVDLKPGSKISLFCDPGFQMVGNPV---QYCLNQGQWTQPLPH 1683
Query: 412 CRRKACSNLPDPLNGQVSYPNGDTLFGSKAQFTCNTGFYIIGAETVYCQVSGNVMAWSEP 591
C R +C P NG Y D GS + CN G+Y++G ++C +G +W+
Sbjct: 1684 CERISCGVPPPLENG--FYSAEDFHAGSTVTYQCNNGYYLLGDSRMFCTDNG---SWNGI 1738
Query: 592 SPLC-----------------------------------------EKILCKPPGEIPNGK 648
SP C E I CK PG NG
Sbjct: 1739 SPSCLDVDECAVGSDCSEYASCLNTNGSYICSCIPPYTGDGKNCAEPIKCKAPGNPENG- 1797
Query: 649 YTNSHKDVFEYNEVVTYSCLSSTGPDEFSLVGESSLFCIGKDEWSSDPPECKGSQMSISS 828
S +++ VT+SC + + LVG + + C+ EWS P C+ + +
Sbjct: 1798 --YSSGEIYTLGAKVTFSC-----KEGYQLVGATKITCLESGEWSDLLPYCEAVFCGVPA 1850
Query: 829 TP 834
P
Sbjct: 1851 IP 1852
Score = 72.0 bits (175), Expect = 9e-13
Identities = 54/190 (28%), Positives = 75/190 (39%), Gaps = 1/190 (0%)
Frame = +1
Query: 238 CDEPPKFESMRPQVLNTTYRPGDRVEYECRPGFRPMVPALPTSSVCQDDNTWSPLQEACR 417
C EPP E+ VL V C+ G P++ C W+ C+
Sbjct: 2322 CPEPPLLENQL--VLKELATEVGVVTLSCKEGHALQGPSVLK---CLPSQQWNDSFPVCK 2376
Query: 418 RKACSNLPDPL-NGQVSYPNGDTLFGSKAQFTCNTGFYIIGAETVYCQVSGNVMAWSEPS 594
C LP PL + V P+ FGS +++C GF++ G T CQ G WS P
Sbjct: 2377 MVLC--LPPPLISFGVPAPSSALHFGSTVKYSCVDGFFLRGDPTTSCQADG---TWSSPL 2431
Query: 595 PLCEKILCKPPGEIPNGKYTNSHKDVFEYNEVVTYSCLSSTGPDEFSLVGESSLFCIGKD 774
P C + C P EI NG + + + S T F LVG +++ C
Sbjct: 2432 PECVPVECPHPEEILNG--------IIDVQGLAYLSTALYTCKPGFELVGNTTILCGENG 2483
Query: 775 EWSSDPPECK 804
+W P CK
Sbjct: 2484 QWLGGKPTCK 2493
Score = 70.9 bits (172), Expect = 2e-12
Identities = 62/195 (31%), Positives = 90/195 (46%), Gaps = 5/195 (2%)
Frame = +1
Query: 235 ACDEPPKFESMRPQVLNTTYRPGD-RVEYECRPGFRPMVPALPTSSVCQDDNTW---SPL 402
+C+EPPK E+ + +TT R + V Y+C PG++ + + VCQ + W SPL
Sbjct: 2202 SCNEPPKVENGFLE--HTTGRIFESEVRYQCNPGYKSVGSPV---FVCQANRHWHSESPL 2256
Query: 403 QEACRRKACSNLPDPLNGQVSYPNGDTLFGSKAQFTCNTGFYIIGAETVYCQVSGNVMAW 582
+C C P NG + N + GSK QF CN GF +IG + CQ SG W
Sbjct: 2257 --SCVPLNCGKPPPIQNGYMKGENFEV--GSKVQFFCNEGFELIGDNSWTCQKSGK---W 2309
Query: 583 SEP-SPLCEKILCKPPGEIPNGKYTNSHKDVFEYNEVVTYSCLSSTGPDEFSLVGESSLF 759
++ + C C P + N K++ VVT SC + +L G S L
Sbjct: 2310 NKKLNQKCVPAKCPEPPLLENQLVL---KELATEVGVVTLSC-----KEGHALQGPSVLK 2361
Query: 760 CIGKDEWSSDPPECK 804
C+ +W+ P CK
Sbjct: 2362 CLPSQQWNDSFPVCK 2376
Score = 66.6 bits (161), Expect = 4e-11
Identities = 43/162 (26%), Positives = 71/162 (43%)
Frame = +1
Query: 316 YECRPGFRPMVPALPTSSVCQDDNTWSPLQEACRRKACSNLPDPLNGQVSYPNGDTLFGS 495
Y C+PGF + T+ +C ++ W + C+ C + NG+ SY + +G
Sbjct: 2463 YTCKPGFELVGN---TTILCGENGQWLGGKPTCKPVECPKPREISNGKFSYTH--LHYGQ 2517
Query: 496 KAQFTCNTGFYIIGAETVYCQVSGNVMAWSEPSPLCEKILCKPPGEIPNGKYTNSHKDVF 675
++C GF + G + + C +G+ W P C I C PP I NG + +
Sbjct: 2518 TITYSCRRGFRLEGPKALTCLETGD---WDMDVPSCSAIHCNPPQPIENGFVEGAD---Y 2571
Query: 676 EYNEVVTYSCLSSTGPDEFSLVGESSLFCIGKDEWSSDPPEC 801
Y ++ YSC + + G + C G+ WSS P+C
Sbjct: 2572 GYGAMIIYSCFPG-----WQVAGHAMQTC-GESGWSSAIPKC 2607
Score = 66.6 bits (161), Expect = 4e-11
Identities = 53/184 (28%), Positives = 75/184 (40%), Gaps = 6/184 (3%)
Frame = +1
Query: 271 PQVLNTT-----YRPGDRVEYECRPGFRPMVPALPTSSVCQDDNTWSPLQEACRRKACSN 435
PQV N Y G V + C+ G+ M+ P + CQ D W +C+ C
Sbjct: 2893 PQVANGVMDGLDYGFGKEVVFHCQDGY--MLHGAPKLT-CQSDGNWDAEFPSCKPVNCGP 2949
Query: 436 LPDPLNGQVSYPNGDTLF-GSKAQFTCNTGFYIIGAETVYCQVSGNVMAWSEPSPLCEKI 612
DP +G +PNG + + G Q+ C G+ + G+ + C G+ WS P C
Sbjct: 2950 PEDPPHG---FPNGFSFYHGGHIQYQCFPGYKLYGSPSRRCLSDGS---WSGSPPSCLPC 3003
Query: 613 LCKPPGEIPNGKYTNSHKDVFEYNEVVTYSCLSSTGPDEFSLVGESSLFCIGKDEWSSDP 792
C P I NG + F +V C F L G S + C D+WSS
Sbjct: 3004 RCSTP-VIQNGAVNGTD---FGCGKVAQIQCFKG-----FKLHGVSEITCEANDQWSSGF 3054
Query: 793 PECK 804
P C+
Sbjct: 3055 PRCE 3058
Score = 63.9 bits (154), Expect = 2e-10
Identities = 49/189 (25%), Positives = 73/189 (38%)
Frame = +1
Query: 238 CDEPPKFESMRPQVLNTTYRPGDRVEYECRPGFRPMVPALPTSSVCQDDNTWSPLQEACR 417
C+ P F + + +V NTT G RV Y C G+ + P C WS C+
Sbjct: 3297 CEAPLGFLNGKAEVENTT--AGLRVVYSCNRGYS--LEGAPEIH-CTGHGVWSHPHPLCK 3351
Query: 418 RKACSNLPDPLNGQVSYPNGDTLFGSKAQFTCNTGFYIIGAETVYCQVSGNVMAWSEPSP 597
C +P + + C GF + G + C W+ +
Sbjct: 3352 PNPCP-VPFVIPENAVLSEKEFYVDQNVSIKCREGFLLQGWGIITCNPDET---WTVTNA 3407
Query: 598 LCEKILCKPPGEIPNGKYTNSHKDVFEYNEVVTYSCLSSTGPDEFSLVGESSLFCIGKDE 777
CEKI C PP + N H ++Y +++TYSC S + L G C+
Sbjct: 3408 KCEKISCGPPTHVGNAIARGIH---YQYGDMITYSCYSG-----YMLEGSLRSICLENGT 3459
Query: 778 WSSDPPECK 804
W+S PP C+
Sbjct: 3460 WTS-PPICR 3467
Score = 62.4 bits (150), Expect = 7e-10
Identities = 53/229 (23%), Positives = 82/229 (35%), Gaps = 39/229 (17%)
Frame = +1
Query: 235 ACDEPPKFESMRPQVLNTTYRPGDRVEYECRPGFRPMVPALPTSSVCQDDNTWSPLQEAC 414
+C PP E+ + + G V Y+C G+ + + C D+ +W+ + +C
Sbjct: 1688 SCGVPPPLENGFYSAED--FHAGSTVTYQCNNGYYLLGDS---RMFCTDNGSWNGISPSC 1742
Query: 415 R----------------------RKACSNLPD----------------PLNGQVSYPNGD 480
CS +P P N + Y +G+
Sbjct: 1743 LDVDECAVGSDCSEYASCLNTNGSYICSCIPPYTGDGKNCAEPIKCKAPGNPENGYSSGE 1802
Query: 481 TL-FGSKAQFTCNTGFYIIGAETVYCQVSGNVMAWSEPSPLCEKILCKPPGEIPNGKYTN 657
G+K F+C G+ ++GA + C SG WS+ P CE + C P NG
Sbjct: 1803 IYTLGAKVTFSCKEGYQLVGATKITCLESGE---WSDLLPYCEAVFCGVPAIPENGDIDV 1859
Query: 658 SHKDVFEYNEVVTYSCLSSTGPDEFSLVGESSLFCIGKDEWSSDPPECK 804
S F Y VTY C ++L G C+ WS P C+
Sbjct: 1860 SS---FTYGSKVTYRCNKG-----YTLNGAKESSCLASGSWSHSLPVCE 1900
Score = 62.0 bits (149), Expect = 9e-10
Identities = 45/176 (25%), Positives = 71/176 (40%)
Frame = +1
Query: 277 VLNTTYRPGDRVEYECRPGFRPMVPALPTSSVCQDDNTWSPLQEACRRKACSNLPDPLNG 456
V + Y V Y+C G+ VCQ + WS C++ C LNG
Sbjct: 3250 VFGSKYSFESTVIYQCETGYELQGNK---ERVCQKNRRWSGEVATCKKTRCEAPLGFLNG 3306
Query: 457 QVSYPNGDTLFGSKAQFTCNTGFYIIGAETVYCQVSGNVMAWSEPSPLCEKILCKPPGEI 636
+ N T G + ++CN G+ + GA ++C G WS P PLC+ C P I
Sbjct: 3307 KAEVEN--TTAGLRVVYSCNRGYSLEGAPEIHCTGHG---VWSHPHPLCKPNPCPVPFVI 3361
Query: 637 PNGKYTNSHKDVFEYNEVVTYSCLSSTGPDEFSLVGESSLFCIGKDEWSSDPPECK 804
P + + F ++ V+ C + F L G + C + W+ +C+
Sbjct: 3362 PENAVLSEKE--FYVDQNVSIKC-----REGFLLQGWGIITCNPDETWTVTNAKCE 3410
Score = 58.5 bits (140), Expect = 1e-08
Identities = 51/197 (25%), Positives = 74/197 (37%), Gaps = 8/197 (4%)
Frame = +1
Query: 235 ACDEPPKFESMRPQVLNTTYRPGDRVEYECRPGFRPMVPALPTSSVCQDDNTWSPLQEA- 411
+CDEPP E P+ + + GD Y C G+ A + +C W P +
Sbjct: 2019 SCDEPPNVEHASPETAHRLF--GDIAFYYCSDGYSL---ADNSQLLCNAQGKWVPPEGQA 2073
Query: 412 ---CRRKACSNLPDPLNGQV-SYPNGDTLFGSKAQFTCNTGFYIIGAETVYCQVSGNVMA 579
C C P + S GS F C GF + + + C G
Sbjct: 2074 MPHCIAHFCEKPPSVSYSILESVSKAKFAAGSVVSFKCMEGFVLNTSAKIECLKGGQ--- 2130
Query: 580 WSEPSPL---CEKILCKPPGEIPNGKYTNSHKDVFEYNEVVTYSCLSSTGPDEFSLVGES 750
W+ PSP+ C + C P I NG + ++ + + +V YSC F + GE
Sbjct: 2131 WN-PSPMSIQCIPVRCGEPPSIMNGYASGTN---YSFGAMVAYSCNKG-----FYIKGEK 2181
Query: 751 SLFCIGKDEWSSDPPEC 801
C +WSS P C
Sbjct: 2182 KSTCEATGQWSSPTPTC 2198
Score = 57.4 bits (137), Expect = 2e-08
Identities = 40/187 (21%), Positives = 70/187 (37%)
Frame = +1
Query: 238 CDEPPKFESMRPQVLNTTYRPGDRVEYECRPGFRPMVPALPTSSVCQDDNTWSPLQEACR 417
C P + + + TY Y C G+ P++ C +W C
Sbjct: 1904 CSSPESINNGKYILSGLTYL--STASYSCESGYSLQGPSVIE---CSASGSWDRAPPTCH 1958
Query: 418 RKACSNLPDPLNGQVSYPNGDTLFGSKAQFTCNTGFYIIGAETVYCQVSGNVMAWSEPSP 597
C P + ++ N FG+ +TC G+ + G +T+ C +G W+ +
Sbjct: 1959 LVVCGEPPAIKDAVITGRN--FTFGNTVTYTCKEGYTLAGPDTIECLANGK---WNGSNQ 2013
Query: 598 LCEKILCKPPGEIPNGKYTNSHKDVFEYNEVVTYSCLSSTGPDEFSLVGESSLFCIGKDE 777
C + C P + + +H+ + ++ Y C D +SL S L C + +
Sbjct: 2014 QCLAVSCDEPPNVEHASPETAHR---LFGDIAFYYC-----SDGYSLADNSQLLCNAQGK 2065
Query: 778 WSSDPPE 798
W PPE
Sbjct: 2066 WV--PPE 2070
Score = 56.6 bits (135), Expect = 4e-08
Identities = 47/154 (30%), Positives = 60/154 (38%), Gaps = 8/154 (5%)
Frame = +1
Query: 367 SVCQDDNTWSP--LQEACRRKACSNLPDPLNGQVSYPNGDTLFGSKAQF------TCNTG 522
S CQ D TW P E+C +C P +G V FGSK F C TG
Sbjct: 3217 STCQLDGTWEPPFSDESCSPVSCGKPESPEHGFV--------FGSKYSFESTVIYQCETG 3268
Query: 523 FYIIGAETVYCQVSGNVMAWSEPSPLCEKILCKPPGEIPNGKYTNSHKDVFEYNEVVTYS 702
+ + G + CQ + WS C+K C+ P NGK + + V YS
Sbjct: 3269 YELQGNKERVCQKN---RRWSGEVATCKKTRCEAPLGFLNGK---AEVENTTAGLRVVYS 3322
Query: 703 CLSSTGPDEFSLVGESSLFCIGKDEWSSDPPECK 804
C +SL G + C G WS P CK
Sbjct: 3323 CNRG-----YSLEGAPEIHCTGHGVWSHPHPLCK 3351
Score = 52.4 bits (124), Expect = 7e-07
Identities = 29/109 (26%), Positives = 51/109 (46%), Gaps = 4/109 (3%)
Frame = +1
Query: 322 CRPGFRPMVPALPTSSVCQDDNTWSPLQEACRRKACSNLPDPLNGQVSYPNGDTLFGSKA 501
C PGF + ++ +C + WS + +CR + C +L P +G++S G+ + +
Sbjct: 406 CHPGFDLVGSSI---LLCLPNGLWSGSESSCRVRTCPHLRQPKHGRISCSTGEMSYRTMC 462
Query: 502 QFTCNTGFYIIGAETVYCQVSGNVMAWSEPSPLCEKILC----KPPGEI 636
TC+ G+ + G+ + CQ + W P C + C KP G I
Sbjct: 463 LVTCDDGYRLEGSAKLTCQANAQ---WDGLEPRCVERYCSTFQKPRGVI 508
Score = 50.1 bits (118), Expect = 4e-06
Identities = 30/106 (28%), Positives = 43/106 (40%)
Frame = +1
Query: 487 FGSKAQFTCNTGFYIIGAETVYCQVSGNVMAWSEPSPLCEKILCKPPGEIPNGKYTNSHK 666
+G+ +TCN G+ ++G+ + CQ G W+ +P C I C P NG H
Sbjct: 2675 YGTIVSYTCNPGYELLGSPMLICQEDGT---WNGSAPSCISIECDLPVAPENGFL---HF 2728
Query: 667 DVFEYNEVVTYSCLSSTGPDEFSLVGESSLFCIGKDEWSSDPPECK 804
V Y C L+G FC+ EWS P C+
Sbjct: 2729 TETTMGNAVQYICKPG-----HILLGSDMRFCLQNREWSGTSPRCE 2769
Score = 49.7 bits (117), Expect = 5e-06
Identities = 43/179 (24%), Positives = 69/179 (38%), Gaps = 4/179 (2%)
Frame = +1
Query: 277 VLNTTYRPGDRVEYECRPGFRPMVPALPTSSVCQDDNTWSPLQEACRRKACSNLPDPLNG 456
V T + G + +C GF+ + T C+ ++ WS C +C + P N
Sbjct: 3015 VNGTDFGCGKVAQIQCFKGFKLHGVSEIT---CEANDQWSSGFPRCEHTSCGSPPVIPNA 3071
Query: 457 QVSYPNGDTLFGSKAQFTCNTGFYIIGAETVYCQVSGNVMAWSEPSPLCEKILCKPPGEI 636
+S +L + + C +G+ I G+ + C G WS+P P CE + C P +
Sbjct: 3072 FIS--ESGSLEENVITYNCRSGYVIQGSSDLVCTEKGT---WSQPYPACEPLSCGSPPSV 3126
Query: 637 PNGKYTNSHKDVFEYNEVVTYSCLS----STGPDEFSLVGESSLFCIGKDEWSSDPPEC 801
N T + Y V CL T D F+ + F + S P +C
Sbjct: 3127 ANAVATG---EAHVYESKVKLRCLEGYVMDTDIDTFTCQKDGRWF---PERISCSPKKC 3179
>ref|XP_850060.1| PREDICTED: similar to CUB and Sushi multiple domains 3 isoform 1
isoform 2 [Canis familiaris].
Length = 3707
Score = 89.4 bits (220), Expect = 5e-18
Identities = 58/177 (32%), Positives = 79/177 (44%), Gaps = 1/177 (0%)
Frame = +1
Query: 274 QVLNTTYRPGDRVEYECRPGFRPMVPALPTSSVCQDDNTWSPLQEACRRKACSNLPDPLN 453
QV+ Y D V Y+C PGFR + ++ +CQ D+ WS +C +C + P+
Sbjct: 2827 QVIGENYGYRDTVVYQCNPGFRLIGSSV---RICQQDHNWSGQLPSCVPVSCGHPGSPIY 2883
Query: 454 GQVSYPNGDTLFGSKAQFTCNTGFYIIGAETVYCQVSGNVMAWSEPSPLCEKILCKPPGE 633
G+ S NG F F+CN G+ + G CQ + WS P P+C+ + C PG
Sbjct: 2884 GRTS-GNGFN-FNDVVTFSCNIGYVMQGPTKAQCQAN---RQWSHPPPVCKVVNCSDPGI 2938
Query: 634 IPNGKYTNS-HKDVFEYNEVVTYSCLSSTGPDEFSLVGESSLFCIGKDEWSSDPPEC 801
N K + F Y VV Y C P F L G S L C +W PEC
Sbjct: 2939 PANSKRESKIEHGNFTYGTVVFYDC----NPGYF-LFGSSVLICQPNGQWDKPLPEC 2990
Score = 82.0 bits (201), Expect = 9e-16
Identities = 56/195 (28%), Positives = 85/195 (43%), Gaps = 2/195 (1%)
Frame = +1
Query: 304 DRVEYECRPGFRPMVPALPTSSVCQDDNTWSPLQEACRRKACSNLPDPLNG--QVSYPNG 477
D V + C G+ V PT + CQ + WS C+ CS+ P N + +G
Sbjct: 2895 DVVTFSCNIGY---VMQGPTKAQCQANRQWSHPPPVCKVVNCSDPGIPANSKRESKIEHG 2951
Query: 478 DTLFGSKAQFTCNTGFYIIGAETVYCQVSGNVMAWSEPSPLCEKILCKPPGEIPNGKYTN 657
+ +G+ + CN G+++ G+ + CQ +G W +P P C I C PG PN +
Sbjct: 2952 NFTYGTVVFYDCNPGYFLFGSSVLICQPNGQ---WDKPLPECIMIDCGHPGVPPNAVLSG 3008
Query: 658 SHKDVFEYNEVVTYSCLSSTGPDEFSLVGESSLFCIGKDEWSSDPPECKGSQMSISSTPH 837
+ + + V YSC TG + +L+G+SS C WS P C G P
Sbjct: 3009 ---EKYTFGSTVHYSC---TG--KRTLLGQSSRTCQLNGHWSGSQPHCSGDATGTCGDPG 3060
Query: 838 L*LLVSTLDKNFTTK 882
S + +F TK
Sbjct: 3061 TPGHGSRQESDFRTK 3075
Score = 75.9 bits (185), Expect = 6e-14
Identities = 56/202 (27%), Positives = 83/202 (41%), Gaps = 3/202 (1%)
Frame = +1
Query: 238 CDEPPKFESMRPQVLNTTYRPGDRVEYECRPGFRPMVPALPTSSVCQDDNTWSPLQEACR 417
C PP+ + R + T + G + Y C PG+ PA+ T C + TWS C
Sbjct: 3233 CPAPPQISNGRLE--GTNFDWGFSISYICSPGYELSFPAVLT---CVGNGTWSGEVPQCL 3287
Query: 418 RKACSNLPDPLNGQVSYPNGDTLFGSKAQFTCNTGFYIIGAETVYCQVSGNVMAWSEPSP 597
K C + P G+ ++ S+ F+CN+ F ++G+ T CQ G WS SP
Sbjct: 3288 PKFCGDPGIPAQGKRE--GKSFIYQSEVSFSCNSPFILVGSSTRICQADG---TWSGSSP 3342
Query: 598 LC---EKILCKPPGEIPNGKYTNSHKDVFEYNEVVTYSCLSSTGPDEFSLVGESSLFCIG 768
C + C+ PG +G N+ F+ VV + C L G ++ C+
Sbjct: 3343 HCIEPTRTSCENPGVPRHGSQNNTFG--FQVGSVVQFHCKKG-----HLLQGSTTRTCLP 3395
Query: 769 KDEWSSDPPECKGSQMSISSTP 834
WS PEC TP
Sbjct: 3396 DLTWSGIQPECIPHSCKQPETP 3417
Score = 75.5 bits (184), Expect = 8e-14
Identities = 54/172 (31%), Positives = 72/172 (41%), Gaps = 2/172 (1%)
Frame = +1
Query: 292 YRPGDRVEYECRPGFRPMVPALPTSSVCQDDNTWSPLQEA--CRRKACSNLPDPLNGQVS 465
Y +V + C PG+ + PA S C + TWS E C+ +C LP P NG
Sbjct: 2715 YEYKTKVVFSCDPGYHGLGPA---SIECLPNGTWSWRNERPYCQIISCGELPTPPNGNKI 2771
Query: 466 YPNGDTLFGSKAQFTCNTGFYIIGAETVYCQVSGNVMAWSEPSPLCEKILCKPPGEIPNG 645
T +GS A FTC++GF ++G+ C SG WS C C P I NG
Sbjct: 2772 --GTQTSYGSTAIFTCDSGFMLVGSAVRECLSSG---LWSGSETRCLAGHCGIPELIVNG 2826
Query: 646 KYTNSHKDVFEYNEVVTYSCLSSTGPDEFSLVGESSLFCIGKDEWSSDPPEC 801
+ + + Y + V Y C F L+G S C WS P C
Sbjct: 2827 QVIGEN---YGYRDTVVYQCNPG-----FRLIGSSVRICQQDHNWSGQLPSC 2870
Score = 70.5 bits (171), Expect = 3e-12
Identities = 50/170 (29%), Positives = 67/170 (39%)
Frame = +1
Query: 292 YRPGDRVEYECRPGFRPMVPALPTSSVCQDDNTWSPLQEACRRKACSNLPDPLNGQVSYP 471
Y G V Y C+PG+ V + C + TWS + CR C P NG++
Sbjct: 3189 YVVGQNVSYMCQPGYTMEVNGSRIRT-CTTNGTWSGIIPTCRAVTCPAPPQISNGRLEGT 3247
Query: 472 NGDTLFGSKAQFTCNTGFYIIGAETVYCQVSGNVMAWSEPSPLCEKILCKPPGEIPNGKY 651
N D +G + C+ G+ + + C +G WS P C C PG GK
Sbjct: 3248 NFD--WGFSISYICSPGYELSFPAVLTCVGNG---TWSGEVPQCLPKFCGDPGIPAQGKR 3302
Query: 652 TNSHKDVFEYNEVVTYSCLSSTGPDEFSLVGESSLFCIGKDEWSSDPPEC 801
F Y V++SC S F LVG S+ C WS P C
Sbjct: 3303 EGKS---FIYQSEVSFSCNS-----PFILVGSSTRICQADGTWSGSSPHC 3344
Score = 70.1 bits (170), Expect = 3e-12
Identities = 51/187 (27%), Positives = 78/187 (41%), Gaps = 5/187 (2%)
Frame = +1
Query: 277 VLNTTYRPGDRVEYECRPGFRPMVPALPTSSVCQDDNTWSPLQEA--CRRKACSNLPDPL 450
+L T Y G RV Y C G+R L T+++CQ D TWS + C C ++
Sbjct: 2643 ILTTDYLVGTRVTYFCNDGYRLSSKEL-TTAICQSDGTWSNHNKTPRCVVVTCPSINSFT 2701
Query: 451 --NGQVSYPNGDTL-FGSKAQFTCNTGFYIIGAETVYCQVSGNVMAWSEPSPLCEKILCK 621
+G+ NG + +K F+C+ G++ +G ++ C +G +W P C+ I C
Sbjct: 2702 LEHGRWRIVNGSHYEYKTKVVFSCDPGYHGLGPASIECLPNG-TWSWRNERPYCQIISC- 2759
Query: 622 PPGEIPNGKYTNSHKDVFEYNEVVTYSCLSSTGPDEFSLVGESSLFCIGKDEWSSDPPEC 801
GE+P N Y ++C S F LVG + C+ WS C
Sbjct: 2760 --GELPTPPNGNKIGTQTSYGSTAIFTCDSG-----FMLVGSAVRECLSSGLWSGSETRC 2812
Query: 802 KGSQMSI 822
I
Sbjct: 2813 LAGHCGI 2819
Score = 61.2 bits (147), Expect = 2e-09
Identities = 44/166 (26%), Positives = 72/166 (43%), Gaps = 2/166 (1%)
Frame = +1
Query: 310 VEYECRPGFRPMVPALPTSSVCQDDNTWSPLQEACRRKACSNLPDPLNGQVSYPNGDTLF 489
V Y C G+ + + P+ C + TWS C +C + P NG + Y D +
Sbjct: 3137 VIYSCMEGY---ILSGPSVRQCTANGTWSGTLPNCTIISCGDPGIPANG-LRY-GDDYVV 3191
Query: 490 GSKAQFTCNTGF--YIIGAETVYCQVSGNVMAWSEPSPLCEKILCKPPGEIPNGKYTNSH 663
G + C G+ + G+ C +G WS P C + C P +I NG+ ++
Sbjct: 3192 GQNVSYMCQPGYTMEVNGSRIRTCTTNG---TWSGIIPTCRAVTCPAPPQISNGRLEGTN 3248
Query: 664 KDVFEYNEVVTYSCLSSTGPDEFSLVGESSLFCIGKDEWSSDPPEC 801
F++ ++Y C S G + L + L C+G WS + P+C
Sbjct: 3249 ---FDWGFSISYIC--SPG---YELSFPAVLTCVGNGTWSGEVPQC 3286
Score = 52.8 bits (125), Expect = 6e-07
Identities = 46/197 (23%), Positives = 73/197 (37%), Gaps = 5/197 (2%)
Frame = +1
Query: 238 CDEP--PKFESMRPQVLNTTYRPGDRVEYECRPGFRPMVPALPTSSVCQDDNTWSPLQEA 411
C +P P ++ + + G V Y+C PG+ ++ +CQ + W
Sbjct: 2933 CSDPGIPANSKRESKIEHGNFTYGTVVFYDCNPGYFLFGSSV---LICQPNGQWDKPLPE 2989
Query: 412 CRRKACSNLPDPLNGQVSYPNGDTLFGSKAQFTCNTGFYIIGAETVYCQVSGNVMAWSEP 591
C C + P N +S FGS ++C ++G + CQ++G+ WS
Sbjct: 2990 CIMIDCGHPGVPPNAVLS--GEKYTFGSTVHYSCTGKRTLLGQSSRTCQLNGH---WSGS 3044
Query: 592 SPLCEKIL---CKPPGEIPNGKYTNSHKDVFEYNEVVTYSCLSSTGPDEFSLVGESSLFC 762
P C C PG +G S F V ++C + L G C
Sbjct: 3045 QPHCSGDATGTCGDPGTPGHGSRQESD---FRTKSSVRFACDIG-----YILHGSEERTC 3096
Query: 763 IGKDEWSSDPPECKGSQ 813
+ W+ PECK Q
Sbjct: 3097 LANGSWTGRQPECKAVQ 3113
Score = 52.8 bits (125), Expect = 6e-07
Identities = 38/144 (26%), Positives = 55/144 (38%)
Frame = +1
Query: 373 CQDDNTWSPLQEACRRKACSNLPDPLNGQVSYPNGDTLFGSKAQFTCNTGFYIIGAETVY 552
C + +W+ Q C+ C N NG+V +G T F S ++C G+ + G
Sbjct: 3096 CLANGSWTGRQPECKAVQCGNPGTTANGKVFRIDG-TTFSSSVIYSCMEGYILSGPSVRQ 3154
Query: 553 CQVSGNVMAWSEPSPLCEKILCKPPGEIPNGKYTNSHKDVFEYNEVVTYSCLSSTGPDEF 732
C +G WS P C I C PG NG + D + + V+Y C
Sbjct: 3155 CTANG---TWSGTLPNCTIISCGDPGIPANGL---RYGDDYVVGQNVSYMCQPGY---TM 3205
Query: 733 SLVGESSLFCIGKDEWSSDPPECK 804
+ G C WS P C+
Sbjct: 3206 EVNGSRIRTCTTNGTWSGIIPTCR 3229
>ref|XP_857918.1| PREDICTED: similar to Complement factor H precursor (H factor 1)
isoform 13 [Canis familiaris].
Length = 1057
Score = 85.5 bits (210), Expect = 8e-17
Identities = 60/217 (27%), Positives = 95/217 (43%), Gaps = 10/217 (4%)
Frame = +1
Query: 181 EILWVSLALVFLLPMPSDACDEPP---KFESMRPQVLNTTYRPGDRVEYECRPGFRPMVP 351
EI+W+ L V + ++ C EPP + + + L TY G + Y+CRPGFR +
Sbjct: 6 EIIWLILWTVCV----AEDCKEPPPRKETQVLSGAWLQQTYPEGTQATYKCRPGFRTLGA 61
Query: 352 ALPTSSVCQDDNTWSPLQEA--CRRKACSNLPDPLNGQVSYPNGDTL-FGSKAQFTCNTG 522
+ + W L + C+R+ C + D G G+ +G+K +TCN G
Sbjct: 62 IIMECK----NGEWVALNPSRICQRRPCGHPGDASFGSFHLERGNKFEYGAKVVYTCNEG 117
Query: 523 FYIIGAETV-YCQVSGNVMAWSEPSPLCEKILCKPPGEIPNGKYTN---SHKDVFEYNEV 690
+ +IG C+ G W+ P+CE + C P E NG+ + + + V
Sbjct: 118 YQLIGRINFRECEPDG----WTNDIPICEVVKCLPVTEPENGRLASIPLESDQEYTFGNV 173
Query: 691 VTYSCLSSTGPDEFSLVGESSLFCIGKDEWSSDPPEC 801
V + C S F L G S + C WS++ P C
Sbjct: 174 VRFECNSG-----FMLDGPSEIHCSANGIWSAEQPRC 205
Score = 67.8 bits (164), Expect = 2e-11
Identities = 62/215 (28%), Positives = 95/215 (44%), Gaps = 8/215 (3%)
Frame = +1
Query: 220 PMPSDACDEPPKFESMRPQVLNTTYRPGDRVEYECRPGFRPMVPALPTSSVCQDDNTWSP 399
P+ +CD P E+ R + T + D V+YEC GF S VC DD WS
Sbjct: 500 PICIKSCDMPVP-ENARIKSNATWFGLNDNVDYECYDGFEGR-QGRTGSIVCGDDG-WSH 556
Query: 400 LQEACRRKACSNLPD------PLNGQVSYPNGDTLFGSKAQFTCNTGFYIIGAETVYCQV 561
+ AC C +P P+ + Y GD L +F+C F +G E++ C
Sbjct: 557 -KPACFEIECK-IPKIDAQLLPIPKKDKYKVGDVL-----KFSCRPRFIRVGPESIQCYH 609
Query: 562 SGNVMAWSEPSPLCEKIL--CKPPGEIPNGKYTNSHKDVFEYNEVVTYSCLSSTGPDEFS 735
G WS P+C++ C P + NG+ + K+ +E+N++V Y C + F
Sbjct: 610 FG----WSPVFPICKEQTKHCAAPPHLLNGEVKETQKETYEHNDLVEYVCNT-----RFL 660
Query: 736 LVGESSLFCIGKDEWSSDPPECKGSQMSISSTPHL 840
+ G + + CI EW +D P C + + P L
Sbjct: 661 MKGFNKIQCI-DGEW-TDLPMCIEVESTCGDIPEL 693
Score = 53.5 bits (127), Expect = 3e-07
Identities = 39/146 (26%), Positives = 64/146 (43%), Gaps = 8/146 (5%)
Frame = +1
Query: 391 WSPLQEACRRKACSNLPDPLNGQV--------SYPNGDTLFGSKAQFTCNTGFYIIGAET 546
W L C + C P QV +YP G ++A + C GF +GA
Sbjct: 9 WLILWTVCVAEDCKEPPPRKETQVLSGAWLQQTYPEG-----TQATYKCRPGFRTLGAII 63
Query: 547 VYCQVSGNVMAWSEPSPLCEKILCKPPGEIPNGKYTNSHKDVFEYNEVVTYSCLSSTGPD 726
+ C+ +G +A + PS +C++ C PG+ G + + FEY V Y+C +
Sbjct: 64 MECK-NGEWVALN-PSRICQRRPCGHPGDASFGSFHLERGNKFEYGAKVVYTC-----NE 116
Query: 727 EFSLVGESSLFCIGKDEWSSDPPECK 804
+ L+G + D W++D P C+
Sbjct: 117 GYQLIGRINFRECEPDGWTNDIPICE 142
Score = 52.8 bits (125), Expect = 6e-07
Identities = 48/213 (22%), Positives = 83/213 (38%), Gaps = 18/213 (8%)
Frame = +1
Query: 217 LPMPSDACDEPPKFESMRPQVLNTTYRPGDRVEYECRPGFRPMVPALPTSSVCQDDNTWS 396
+ + +C PP+ + + + ++ G++V C+ + + VC+D W
Sbjct: 800 IEVEKQSCPPPPQIPNAQNVITTVNFKDGEKVSVVCQDDY---IIQDAEEIVCKDGR-WQ 855
Query: 397 PLQEACRRKACSNLPDPL-NGQV----------------SYPNGDTLFGSKAQFTCNTGF 525
+ + C P P+ +G + SYP+G SK +TC GF
Sbjct: 856 SVPRCIEKIPCPQ-PSPIEHGTIKSSIFSEEIEETSKPKSYPHG-----SKLNYTCEDGF 909
Query: 526 YIIGAETVYCQVSGNVMAWSE-PSPLCEKILCKPPGEIPNGKYTNSHKDVFEYNEVVTYS 702
+ + + CQ+ WS P + K C PP I NG T+ + V Y
Sbjct: 910 RVSEKDEITCQMG----KWSSLPRCVESKGKCGPPPPIDNGDITSFPLSAYAPESTVEYK 965
Query: 703 CLSSTGPDEFSLVGESSLFCIGKDEWSSDPPEC 801
C S ++L G + C +W+ PP+C
Sbjct: 966 CQSL-----YALQGNRIVRC-RNGQWTK-PPKC 991
>ref|
Animal-Genome cDNA 20110601C-014101
Animal-Genome cDNA 20110601C-014101
Search to RefSeqBP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-014101
(1051 letters)
Database: RefSeq49_BP.fasta
33,088 sequences; 17,681,374 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001229494.1| membrane cofactor protein isoform 5 [Bos tau... 277 1e-74
Alignment gi|NP_001229493.1| membrane cofactor protein isoform 6 [Bos tau... 277 1e-74
Alignment gi|NP_001229492.1| membrane cofactor protein isoform 1 [Bos tau... 277 1e-74
Alignment gi|NP_898903.2| membrane cofactor protein isoform 2 [Bos taurus]. 277 1e-74
Alignment gi|NP_001229491.1| membrane cofactor protein isoform 3 [Bos tau... 277 1e-74
Alignment gi|NP_001229490.1| membrane cofactor protein isoform 4 [Bos tau... 277 1e-74
Alignment gi|XP_002694271.1| PREDICTED: CD46 antigen, complement regulato... 266 1e-71
Alignment gi|XP_596410.4| PREDICTED: CD46 antigen, complement regulatory ... 265 2e-71
Alignment gi|XP_002694272.1| PREDICTED: CD46 antigen, complement regulato... 248 3e-66
Alignment gi|XP_875508.3| PREDICTED: CD46 antigen, complement regulatory ... 248 3e-66
>ref|NP_001229494.1| membrane cofactor protein isoform 5 [Bos taurus].
Length = 344
Score = 277 bits (708), Expect = 1e-74
Identities = 135/235 (57%), Positives = 162/235 (68%), Gaps = 2/235 (0%)
Frame = +1
Query: 106 MMAFCALRKALPCRPENPFSSRCFVEILWVSLALVFLLPMPSDACDEPPKFESMRPQ-VL 282
M A C KA RPE SS F +L LA + LLP SDACD+PP+F SM+PQ L
Sbjct: 1 MRASCTPLKAPLRRPERLASSGRFAWVLL--LAPLLLLPTSSDACDDPPRFVSMKPQGTL 58
Query: 283 NTTYRPGDRVEYECRPGFRPMVPALPTSSVCQDDNTWSPLQEACRRKACSNLPDPLNGQV 462
+Y PG+++ YECR GF+P+ P + VCQD+NTWS LQE C+++ C L DP NGQV
Sbjct: 59 KPSYSPGEQIVYECRLGFQPVTPGQVLALVCQDNNTWSSLQEGCKKRRCPTLADPTNGQV 118
Query: 463 SYPNGDTLFGSKAQFTCNTGFYIIGAETVYCQVS-GNVMAWSEPSPLCEKILCKPPGEIP 639
NG T FGS+ + CN G+Y++G YC+VS G + WS+ P CEKILC+PP EI
Sbjct: 119 ILVNGSTAFGSEVHYVCNNGYYLLGTNISYCEVSSGTGVNWSDNPPTCEKILCQPPPEIQ 178
Query: 640 NGKYTNSHKDVFEYNEVVTYSCLSSTGPDEFSLVGESSLFCIGKDEWSSDPPECK 804
NGKYTNSHKDVFEYNEVVTYSC S GPDE+SLVGES L CIG EWSS PP+CK
Sbjct: 179 NGKYTNSHKDVFEYNEVVTYSCDPSNGPDEYSLVGESKLTCIGNGEWSSQPPQCK 233
>ref|NP_001229493.1| membrane cofactor protein isoform 6 [Bos taurus].
Length = 347
Score = 277 bits (708), Expect = 1e-74
Identities = 135/235 (57%), Positives = 162/235 (68%), Gaps = 2/235 (0%)
Frame = +1
Query: 106 MMAFCALRKALPCRPENPFSSRCFVEILWVSLALVFLLPMPSDACDEPPKFESMRPQ-VL 282
M A C KA RPE SS F +L LA + LLP SDACD+PP+F SM+PQ L
Sbjct: 1 MRASCTPLKAPLRRPERLASSGRFAWVLL--LAPLLLLPTSSDACDDPPRFVSMKPQGTL 58
Query: 283 NTTYRPGDRVEYECRPGFRPMVPALPTSSVCQDDNTWSPLQEACRRKACSNLPDPLNGQV 462
+Y PG+++ YECR GF+P+ P + VCQD+NTWS LQE C+++ C L DP NGQV
Sbjct: 59 KPSYSPGEQIVYECRLGFQPVTPGQVLALVCQDNNTWSSLQEGCKKRRCPTLADPTNGQV 118
Query: 463 SYPNGDTLFGSKAQFTCNTGFYIIGAETVYCQVS-GNVMAWSEPSPLCEKILCKPPGEIP 639
NG T FGS+ + CN G+Y++G YC+VS G + WS+ P CEKILC+PP EI
Sbjct: 119 ILVNGSTAFGSEVHYVCNNGYYLLGTNISYCEVSSGTGVNWSDNPPTCEKILCQPPPEIQ 178
Query: 640 NGKYTNSHKDVFEYNEVVTYSCLSSTGPDEFSLVGESSLFCIGKDEWSSDPPECK 804
NGKYTNSHKDVFEYNEVVTYSC S GPDE+SLVGES L CIG EWSS PP+CK
Sbjct: 179 NGKYTNSHKDVFEYNEVVTYSCDPSNGPDEYSLVGESKLTCIGNGEWSSQPPQCK 233
>ref|NP_001229492.1| membrane cofactor protein isoform 1 [Bos taurus].
Length = 364
Score = 277 bits (708), Expect = 1e-74
Identities = 135/235 (57%), Positives = 162/235 (68%), Gaps = 2/235 (0%)
Frame = +1
Query: 106 MMAFCALRKALPCRPENPFSSRCFVEILWVSLALVFLLPMPSDACDEPPKFESMRPQ-VL 282
M A C KA RPE SS F +L LA + LLP SDACD+PP+F SM+PQ L
Sbjct: 1 MRASCTPLKAPLRRPERLASSGRFAWVLL--LAPLLLLPTSSDACDDPPRFVSMKPQGTL 58
Query: 283 NTTYRPGDRVEYECRPGFRPMVPALPTSSVCQDDNTWSPLQEACRRKACSNLPDPLNGQV 462
+Y PG+++ YECR GF+P+ P + VCQD+NTWS LQE C+++ C L DP NGQV
Sbjct: 59 KPSYSPGEQIVYECRLGFQPVTPGQVLALVCQDNNTWSSLQEGCKKRRCPTLADPTNGQV 118
Query: 463 SYPNGDTLFGSKAQFTCNTGFYIIGAETVYCQVS-GNVMAWSEPSPLCEKILCKPPGEIP 639
NG T FGS+ + CN G+Y++G YC+VS G + WS+ P CEKILC+PP EI
Sbjct: 119 ILVNGSTAFGSEVHYVCNNGYYLLGTNISYCEVSSGTGVNWSDNPPTCEKILCQPPPEIQ 178
Query: 640 NGKYTNSHKDVFEYNEVVTYSCLSSTGPDEFSLVGESSLFCIGKDEWSSDPPECK 804
NGKYTNSHKDVFEYNEVVTYSC S GPDE+SLVGES L CIG EWSS PP+CK
Sbjct: 179 NGKYTNSHKDVFEYNEVVTYSCDPSNGPDEYSLVGESKLTCIGNGEWSSQPPQCK 233
>ref|NP_898903.2| membrane cofactor protein isoform 2 [Bos taurus].
Length = 365
Score = 277 bits (708), Expect = 1e-74
Identities = 135/235 (57%), Positives = 162/235 (68%), Gaps = 2/235 (0%)
Frame = +1
Query: 106 MMAFCALRKALPCRPENPFSSRCFVEILWVSLALVFLLPMPSDACDEPPKFESMRPQ-VL 282
M A C KA RPE SS F +L LA + LLP SDACD+PP+F SM+PQ L
Sbjct: 1 MRASCTPLKAPLRRPERLASSGRFAWVLL--LAPLLLLPTSSDACDDPPRFVSMKPQGTL 58
Query: 283 NTTYRPGDRVEYECRPGFRPMVPALPTSSVCQDDNTWSPLQEACRRKACSNLPDPLNGQV 462
+Y PG+++ YECR GF+P+ P + VCQD+NTWS LQE C+++ C L DP NGQV
Sbjct: 59 KPSYSPGEQIVYECRLGFQPVTPGQVLALVCQDNNTWSSLQEGCKKRRCPTLADPTNGQV 118
Query: 463 SYPNGDTLFGSKAQFTCNTGFYIIGAETVYCQVS-GNVMAWSEPSPLCEKILCKPPGEIP 639
NG T FGS+ + CN G+Y++G YC+VS G + WS+ P CEKILC+PP EI
Sbjct: 119 ILVNGSTAFGSEVHYVCNNGYYLLGTNISYCEVSSGTGVNWSDNPPTCEKILCQPPPEIQ 178
Query: 640 NGKYTNSHKDVFEYNEVVTYSCLSSTGPDEFSLVGESSLFCIGKDEWSSDPPECK 804
NGKYTNSHKDVFEYNEVVTYSC S GPDE+SLVGES L CIG EWSS PP+CK
Sbjct: 179 NGKYTNSHKDVFEYNEVVTYSCDPSNGPDEYSLVGESKLTCIGNGEWSSQPPQCK 233
>ref|NP_001229491.1| membrane cofactor protein isoform 3 [Bos taurus].
Length = 368
Score = 277 bits (708), Expect = 1e-74
Identities = 135/235 (57%), Positives = 162/235 (68%), Gaps = 2/235 (0%)
Frame = +1
Query: 106 MMAFCALRKALPCRPENPFSSRCFVEILWVSLALVFLLPMPSDACDEPPKFESMRPQ-VL 282
M A C KA RPE SS F +L LA + LLP SDACD+PP+F SM+PQ L
Sbjct: 1 MRASCTPLKAPLRRPERLASSGLFAWVLL--LAPLLLLPTCSDACDDPPRFVSMKPQGTL 58
Query: 283 NTTYRPGDRVEYECRPGFRPMVPALPTSSVCQDDNTWSPLQEACRRKACSNLPDPLNGQV 462
+Y PG+++ YECR GF+P+ P + VCQD+NTWS LQE C+++ C L DP NGQV
Sbjct: 59 KPSYSPGEQIVYECRLGFQPVTPGQVLALVCQDNNTWSSLQEGCKKRRCPTLADPTNGQV 118
Query: 463 SYPNGDTLFGSKAQFTCNTGFYIIGAETVYCQVS-GNVMAWSEPSPLCEKILCKPPGEIP 639
NG T FGS+ + CN G+Y++G YC+VS G + WS+ P CEKILC+PP EI
Sbjct: 119 ILVNGSTAFGSEVHYVCNNGYYLLGTNISYCEVSSGTGVNWSDNPPTCEKILCQPPPEIQ 178
Query: 640 NGKYTNSHKDVFEYNEVVTYSCLSSTGPDEFSLVGESSLFCIGKDEWSSDPPECK 804
NGKYTNSHKDVFEYNEVVTYSC S GPDE+SLVGES L CIG EWSS PP+CK
Sbjct: 179 NGKYTNSHKDVFEYNEVVTYSCDPSNGPDEYSLVGESKLTCIGNGEWSSQPPQCK 233
>ref|NP_001229490.1| membrane cofactor protein isoform 4 [Bos taurus].
Length = 418
Score = 277 bits (708), Expect = 1e-74
Identities = 135/235 (57%), Positives = 162/235 (68%), Gaps = 2/235 (0%)
Frame = +1
Query: 106 MMAFCALRKALPCRPENPFSSRCFVEILWVSLALVFLLPMPSDACDEPPKFESMRPQ-VL 282
M A C KA RPE SS F +L LA + LLP SDACD+PP+F SM+PQ L
Sbjct: 1 MRASCTPLKAPLRRPERLASSGRFAWVLL--LAPLLLLPTSSDACDDPPRFVSMKPQGTL 58
Query: 283 NTTYRPGDRVEYECRPGFRPMVPALPTSSVCQDDNTWSPLQEACRRKACSNLPDPLNGQV 462
+Y PG+++ YECR GF+P+ P + VCQD+NTWS LQE C+++ C L DP NGQV
Sbjct: 59 KPSYSPGEQIVYECRLGFQPVTPGQVLALVCQDNNTWSSLQEGCKKRRCPTLADPTNGQV 118
Query: 463 SYPNGDTLFGSKAQFTCNTGFYIIGAETVYCQVS-GNVMAWSEPSPLCEKILCKPPGEIP 639
NG T FGS+ + CN G+Y++G YC+VS G + WS+ P CEKILC+PP EI
Sbjct: 119 ILVNGSTAFGSEVHYVCNNGYYLLGTNISYCEVSSGTGVNWSDNPPTCEKILCQPPPEIQ 178
Query: 640 NGKYTNSHKDVFEYNEVVTYSCLSSTGPDEFSLVGESSLFCIGKDEWSSDPPECK 804
NGKYTNSHKDVFEYNEVVTYSC S GPDE+SLVGES L CIG EWSS PP+CK
Sbjct: 179 NGKYTNSHKDVFEYNEVVTYSCDPSNGPDEYSLVGESKLTCIGNGEWSSQPPQCK 233
>ref|XP_002694271.1| PREDICTED: CD46 antigen, complement regulatory protein-like [Bos
taurus].
Length = 395
Score = 266 bits (679), Expect(2) = 1e-71
Identities = 118/203 (58%), Positives = 153/203 (75%), Gaps = 1/203 (0%)
Frame = +1
Query: 199 LALVFLLPMPSDACDEPPKFESMRPQ-VLNTTYRPGDRVEYECRPGFRPMVPALPTSSVC 375
+ LV LLP SDAC +PP+FE+MR + Y PG+RV+Y+CR GF+P++P P S+VC
Sbjct: 4 VVLVLLLPSVSDACGDPPRFETMRLRGAPKPRYGPGERVQYDCRLGFKPIIPLRPRSAVC 63
Query: 376 QDDNTWSPLQEACRRKACSNLPDPLNGQVSYPNGDTLFGSKAQFTCNTGFYIIGAETVYC 555
+DDNTWS L+EAC RK+C NL DP+NGQV + NG LFGS+A F CN GFY+IGA +YC
Sbjct: 64 EDDNTWSALEEACTRKSCPNLGDPVNGQVYFVNGSVLFGSQAHFVCNQGFYLIGARILYC 123
Query: 556 QVSGNVMAWSEPSPLCEKILCKPPGEIPNGKYTNSHKDVFEYNEVVTYSCLSSTGPDEFS 735
++S N + W++ SP+CEKILC PG I NG++T +KD ++YNE+V Y C S GPDE+S
Sbjct: 124 EISENNVNWNDDSPICEKILCSTPGNIKNGRFT-VYKDEYQYNEIVIYMCDPSNGPDEYS 182
Query: 736 LVGESSLFCIGKDEWSSDPPECK 804
LVGES+L C+ D WSSDPPECK
Sbjct: 183 LVGESTLICVDYDRWSSDPPECK 205
Score = 23.1 bits (48), Expect(2) = 1e-71
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +2
Query: 791 PLSVKVVKCPYPVL 832
P KVVKC YPV+
Sbjct: 201 PPECKVVKCDYPVV 214
>ref|XP_596410.4| PREDICTED: CD46 antigen, complement regulatory protein-like [Bos
taurus].
Length = 536
Score = 265 bits (678), Expect(2) = 2e-71
Identities = 118/201 (58%), Positives = 152/201 (75%), Gaps = 1/201 (0%)
Frame = +1
Query: 205 LVFLLPMPSDACDEPPKFESMRPQ-VLNTTYRPGDRVEYECRPGFRPMVPALPTSSVCQD 381
LV LLP SDAC +PP+FE+MR + Y PG+RV+Y+CR GF+P++P P S+VC+D
Sbjct: 6 LVLLLPSVSDACGDPPRFETMRLRGAPKPRYGPGERVQYDCRLGFKPIIPLRPRSAVCED 65
Query: 382 DNTWSPLQEACRRKACSNLPDPLNGQVSYPNGDTLFGSKAQFTCNTGFYIIGAETVYCQV 561
DNTWS L+EAC RK+C NL DP+NGQV + NG LFGS+A F CN GFY+IGA +YC++
Sbjct: 66 DNTWSALEEACTRKSCPNLGDPVNGQVYFVNGSVLFGSQAHFVCNQGFYLIGARILYCEI 125
Query: 562 SGNVMAWSEPSPLCEKILCKPPGEIPNGKYTNSHKDVFEYNEVVTYSCLSSTGPDEFSLV 741
S N + W++ SP+CEKILC PG I NG++T +KD ++YNE+V Y C S GPDE+SLV
Sbjct: 126 SENNVNWNDDSPICEKILCSTPGNIKNGRFT-VYKDEYQYNEIVIYMCDPSNGPDEYSLV 184
Query: 742 GESSLFCIGKDEWSSDPPECK 804
GES+L C+ D WSSDPPECK
Sbjct: 185 GESTLICVDYDRWSSDPPECK 205
Score = 23.1 bits (48), Expect(2) = 2e-71
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +2
Query: 791 PLSVKVVKCPYPVL 832
P KVVKC YPV+
Sbjct: 201 PPECKVVKCDYPVV 214
>ref|XP_002694272.1| PREDICTED: CD46 antigen, complement regulatory protein-like [Bos
taurus].
Length = 301
Score = 248 bits (634), Expect(2) = 3e-66
Identities = 112/201 (55%), Positives = 150/201 (74%), Gaps = 1/201 (0%)
Frame = +1
Query: 205 LVFLLPMPSDACDEPPKFESMRPQ-VLNTTYRPGDRVEYECRPGFRPMVPALPTSSVCQD 381
LV LLP S+AC +PP+F++M Q YRPG+ V+YECR GF+ +PALP S+VCQD
Sbjct: 6 LVLLLPSVSEACGDPPRFKTMMLQGEPKPNYRPGECVQYECRLGFKAKLPALPRSAVCQD 65
Query: 382 DNTWSPLQEACRRKACSNLPDPLNGQVSYPNGDTLFGSKAQFTCNTGFYIIGAETVYCQV 561
+NTWS LQ+AC K+C NL DP NGQV++ NG LFGS+A +CN GFY+IGA+ +YC++
Sbjct: 66 NNTWSSLQDACVGKSCPNLGDPANGQVNFVNGSVLFGSQAHVSCNPGFYLIGAKVIYCEI 125
Query: 562 SGNVMAWSEPSPLCEKILCKPPGEIPNGKYTNSHKDVFEYNEVVTYSCLSSTGPDEFSLV 741
SG+ + WS+ P+CE ILC PG I NG++T +K+V+ Y+EVV Y C S GPDE+SL+
Sbjct: 126 SGDNVNWSDNLPICEIILCATPGNITNGRFT-QYKEVYRYSEVVIYRCDPSHGPDEYSLI 184
Query: 742 GESSLFCIGKDEWSSDPPECK 804
GE++L C+ + WSSDPPECK
Sbjct: 185 GETTLICVDHNRWSSDPPECK 205
Score = 22.7 bits (47), Expect(2) = 3e-66
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = +2
Query: 791 PLSVKVVKCPYPVL 832
P KVVKC YP++
Sbjct: 201 PPECKVVKCDYPIV 214
Score = 50.1 bits (118), Expect = 3e-06
Identities = 36/125 (28%), Positives = 51/125 (40%), Gaps = 3/125 (2%)
Frame = +1
Query: 238 CDEPPKFESMRPQVLNTTYRPGDRVEYECRPGFRPMVPAL--PTSSVCQDDNTWSPLQEA 411
C P + R YR + V Y C P P +L T+ +C D N WS
Sbjct: 144 CATPGNITNGRFTQYKEVYRYSEVVIYRCDPSHGPDEYSLIGETTLICVDHNRWSSDPPE 203
Query: 412 CRRKACSNLPDPLNGQ-VSYPNGDTLFGSKAQFTCNTGFYIIGAETVYCQVSGNVMAWSE 588
C+ C + P NG VS G + + F C+ GF++ G+ T+ C +G W
Sbjct: 204 CKVVKC-DYPIVENGAIVSGFRGKYYYNMQVVFQCHDGFHLHGSSTIVCGANG---TWEP 259
Query: 589 PSPLC 603
P C
Sbjct: 260 KLPKC 264
>ref|XP_875508.3| PREDICTED: CD46 antigen, complement regulatory protein-like [Bos
taurus].
Length = 301
Score = 248 bits (634), Expect(2) = 3e-66
Identities = 112/201 (55%), Positives = 150/201 (74%), Gaps = 1/201 (0%)
Frame = +1
Query: 205 LVFLLPMPSDACDEPPKFESMRPQ-VLNTTYRPGDRVEYECRPGFRPMVPALPTSSVCQD 381
LV LLP S+AC +PP+F++M Q YRPG+ V+YECR GF+ +PALP S+VCQD
Sbjct: 6 LVLLLPSVSEACGDPPRFKTMMLQGEPKPNYRPGECVQYECRLGFKAKLPALPRSAVCQD 65
Query: 382 DNTWSPLQEACRRKACSNLPDPLNGQVSYPNGDTLFGSKAQFTCNTGFYIIGAETVYCQV 561
+NTWS LQ+AC K+C NL DP NGQV++ NG LFGS+A +CN GFY+IGA+ +YC++
Sbjct: 66 NNTWSSLQDACVGKSCPNLGDPANGQVNFVNGSVLFGSQAHVSCNPGFYLIGAKVIYCEI 125
Query: 562 SGNVMAWSEPSPLCEKILCKPPGEIPNGKYTNSHKDVFEYNEVVTYSCLSSTGPDEFSLV 741
SG+ + WS+ P+CE ILC PG I NG++T +K+V+ Y+EVV Y C S GPDE+SL+
Sbjct: 126 SGDNVNWSDNLPICEIILCATPGNITNGRFT-QYKEVYRYSEVVIYRCDPSHGPDEYSLI 184
Query: 742 GESSLFCIGKDEWSSDPPECK 804
GE++L C+ + WSSDPPECK
Sbjct: 185 GETTLICVDHNRWSSDPPECK 205
Score = 22.7 bits (47), Expect(2) = 3e-66
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = +2
Query: 791 PLSVKVVKCPYPVL 832
P KVVKC YP++
Sbjct: 201 PPECKVVKCDYPIV 214
Score = 50.1 bits (118), Expect = 3e-06
Identities = 36/125 (28%), Positives = 51/125 (40%), Gaps = 3/125 (2%)
Frame = +1
Query: 238 CDEPPKFESMRPQVLNTTYRPGDRVEYECRPGFRPMVPAL--PTSSVCQDDNTWSPLQEA 411
C P + R YR + V Y C P P +L T+ +C D N WS
Sbjct: 144 CATPGNITNGRFTQYKEVYRYSEVVIYRCDPSHGPDEYSLIGETTLICVDHNRWSSDPPE 203
Query: 412 CRRKACSNLPDPLNGQ-VSYPNGDTLFGSKAQFTCNTGFYIIGAETVYCQVSGNVMAWSE 588
C+ C + P NG VS G + + F C+ GF++ G+ T+ C +G W
Sbjct: 204 CKVVKC-DYPIVENGAIVSGFRGKYYYNMQVVFQCHDGFHLHGSSTIVCGANG---TWEP 259
Query: 589 PSPLC 603
P C
Sbjct: 260 KLPKC 264
Database: RefSeq49_BP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 17,681,374
Number of sequences in database: 33,088
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33088
Number of Hits to DB: 43,981,017
Number of extensions: 1257416
Number of successful extensions: 4202
Number of sequences better than 1.0e-05: 49
Number of HSP's gapped: 3801
Number of HSP's successfully gapped: 184
Length of query: 350
Length of database: 17,681,374
Length adjustment: 103
Effective length of query: 247
Effective length of database: 14,273,310
Effective search space: 3525507570
Effective search space used: 3525507570
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)
p://www.ncbi.nlm.nih.gov/protein/XP_857879.1>XP_857879.1| PREDICTED: similar to Complement factor H precursor (H factor 1)
isoform 12 [Canis familiaris].
Length = 987
Score = 85.5 bits (210), Expect = 8e-17
Identities = 60/217 (27%), Positives = 95/217 (43%), Gaps = 10/217 (4%)
Frame = +1
Query: 181 EILWVSLALVFLLPMPSDACDEPP---KFESMRPQVLNTTYRPGDRVEYECRPGFRPMVP 351
EI+W+ L V + ++ C EPP + + + L TY G + Y+CRPGFR +
Sbjct: 6 EIIWLILWTVCV----AEDCKEPPPRKETQVLSGAWLQQTYPEGTQATYKCRPGFRTLGA 61
Query: 352 ALPTSSVCQDDNTWSPLQEA--CRRKACSNLPDPLNGQVSYPNGDTL-FGSKAQFTCNTG 522
+ + W L + C+R+ C + D G G+ +G+K +TCN G
Sbjct: 62 IIMECK----NGEWVALNPSRICQRRPCGHPGDASFGSFHLERGNKFEYGAKVVYTCNEG 117
Query: 523 FYIIGAETV-YCQVSGNVMAWSEPSPLCEKILCKPPGEIPNGKYTN---SHKDVFEYNEV 690
+ +IG C+ G W+ P+CE + C P E NG+ + + + V
Sbjct: 118 YQLIGRINFRECEPDG----WTNDIPICEVVKCLPVTEPENGRLASIPLESDQEYTFGNV 173
Query: 691 VTYSCLSSTGPDEFSLVGESSLFCIGKDEWSSDPPEC 801
V + C S F L G S + C WS++ P C
Sbjct: 174 VRFECNSG-----FMLDGPSEIHCSANGIWSAEQPRC 205
Score = 67.8 bits (164), Expect = 2e-11
Identities = 62/215 (28%), Positives = 95/215 (44%), Gaps = 8/215 (3%)
Frame = +1
Query: 220 PMPSDACDEPPKFESMRPQVLNTTYRPGDRVEYECRPGFRPMVPALPTSSVCQDDNTWSP 399
P+ +CD P E+ R + T + D V+YEC GF S VC DD WS
Sbjct: 500 PICIKSCDMPVP-ENARIKSNATWFGLNDNVDYECYDGFEGR-QGRTGSIVCGDDG-WSH 556
Query: 400 LQEACRRKACSNLPD------PLNGQVSYPNGDTLFGSKAQFTCNTGFYIIGAETVYCQV 561
+ AC C +P P+ + Y GD L +F+C F +G E++ C
Sbjct: 557 -KPACFEIECK-IPKIDAQLLPIPKKDKYKVGDVL-----KFSCRPRFIRVGPESIQCYH 609
Query: 562 SGNVMAWSEPSPLCEKIL--CKPPGEIPNGKYTNSHKDVFEYNEVVTYSCLSSTGPDEFS 735
G WS P+C++ C P + NG+ + K+ +E+N++V Y C + F
Sbjct: 610 FG----WSPVFPICKEQTKHCAAPPHLLNGEVKETQKETYEHNDLVEYVCNT-----RFL 660
Query: 736 LVGESSLFCIGKDEWSSDPPECKGSQMSISSTPHL 840
+ G + + CI EW +D P C + + P L
Sbjct: 661 MKGFNKIQCI-DGEW-TDLPMCIEVESTCGDIPEL 693
Score = 53.5 bits (127), Expect = 3e-07
Identities = 39/146 (26%), Positives = 64/146 (43%), Gaps = 8/146 (5%)
Frame = +1
Query: 391 WSPLQEACRRKACSNLPDPLNGQV--------SYPNGDTLFGSKAQFTCNTGFYIIGAET 546
W L C + C P QV +YP G ++A + C GF +GA
Sbjct: 9 WLILWTVCVAEDCKEPPPRKETQVLSGAWLQQTYPEG-----TQATYKCRPGFRTLGAII 63
Query: 547 VYCQVSGNVMAWSEPSPLCEKILCKPPGEIPNGKYTNSHKDVFEYNEVVTYSCLSSTGPD 726
+ C+ +G +A + PS +C++ C PG+ G + + FEY V Y+C +
Sbjct: 64 MECK-NGEWVALN-PSRICQRRPCGHPGDASFGSFHLERGNKFEYGAKVVYTC-----NE 116
Query: 727 EFSLVGESSLFCIGKDEWSSDPPECK 804
+ L+G + D W++D P C+
Sbjct: 117 GYQLIGRINFRECEPDGWTNDIPICE 142
>ref|XP_857842.1| PREDICTED: similar to complement component factor h isoform 11
[Canis familiaris].
Length = 626
Score = 85.5 bits (210), Expect = 8e-17
Identities = 60/217 (27%), Positives = 95/217 (43%), Gaps = 10/217 (4%)
Frame = +1
Query: 181 EILWVSLALVFLLPMPSDACDEPP---KFESMRPQVLNTTYRPGDRVEYECRPGFRPMVP 351
EI+W+ L V + ++ C EPP + + + L TY G + Y+CRPGFR +
Sbjct: 6 EIIWLILWTVCV----AEDCKEPPPRKETQVLSGAWLQQTYPEGTQATYKCRPGFRTLGA 61
Query: 352 ALPTSSVCQDDNTWSPLQEA--CRRKACSNLPDPLNGQVSYPNGDTL-FGSKAQFTCNTG 522
+ + W L + C+R+ C + D G G+ +G+K +TCN G
Sbjct: 62 IIMECK----NGEWVALNPSRICQRRPCGHPGDASFGSFHLERGNKFEYGAKVVYTCNEG 117
Query: 523 FYIIGAETV-YCQVSGNVMAWSEPSPLCEKILCKPPGEIPNGKYTN---SHKDVFEYNEV 690
+ +IG C+ G W+ P+CE + C P E NG+ + + + V
Sbjct: 118 YQLIGRINFRECEPDG----WTNDIPICEVVKCLPVTEPENGRLASIPLESDQEYTFGNV 173
Query: 691 VTYSCLSSTGPDEFSLVGESSLFCIGKDEWSSDPPEC 801
V + C S F L G S + C WS++ P C
Sbjct: 174 VRFECNSG-----FMLDGPSEIHCSANGIWSAEQPRC 205
Score = 53.5 bits (127), Expect = 3e-07
Identities = 39/146 (26%), Positives = 64/146 (43%), Gaps = 8/146 (5%)
Frame = +1
Query: 391 WSPLQEACRRKACSNLPDPLNGQV--------SYPNGDTLFGSKAQFTCNTGFYIIGAET 546
W L C + C P QV +YP G ++A + C GF +GA
Sbjct: 9 WLILWTVCVAEDCKEPPPRKETQVLSGAWLQQTYPEG-----TQATYKCRPGFRTLGAII 63
Query: 547 VYCQVSGNVMAWSEPSPLCEKILCKPPGEIPNGKYTNSHKDVFEYNEVVTYSCLSSTGPD 726
+ C+ +G +A + PS +C++ C PG+ G + + FEY V Y+C +
Sbjct: 64 MECK-NGEWVALN-PSRICQRRPCGHPGDASFGSFHLERGNKFEYGAKVVYTC-----NE 116
Query: 727 EFSLVGESSLFCIGKDEWSSDPPECK 804
+ L+G + D W++D P C+
Sbjct: 117 GYQLIGRINFRECEPDGWTNDIPICE 142
Database: RefSeq49_CP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,874,504
Number of sequences in database: 33,336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33336
Number of Hits to DB: 45,943,863
Number of extensions: 1294440
Number of successful extensions: 4227
Number of sequences better than 1.0e-05: 35
Number of HSP's gapped: 3917
Number of HSP's successfully gapped: 132
Length of query: 350
Length of database: 18,874,504
Length adjustment: 104
Effective length of query: 246
Effective length of database: 15,407,560
Effective search space: 3790259760
Effective search space used: 3790259760
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to RefSeqSP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-014101
(1051 letters)
Database: RefSeq49_SP.fasta
24,897 sequences; 11,343,932 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_999053.1| membrane cofactor protein precursor [Sus scrofa]. 494 e-140
Alignment gi|XP_003130176.1| PREDICTED: membrane cofactor protein-like [S... 277 4e-75
Alignment gi|XP_003130174.2| PREDICTED: complement receptor type 1-like [... 152 3e-37
Alignment gi|XP_003130504.1| PREDICTED: c4b-binding protein alpha chain-l... 131 5e-31
Alignment gi|XP_003357473.1| PREDICTED: complement receptor type 2 [Sus s... 100 1e-21
Alignment gi|XP_003355040.1| PREDICTED: CUB and sushi domain-containing p... 92 6e-19
Alignment gi|NP_999433.1| E-selectin [Sus scrofa]. 92 6e-19
Alignment gi|NP_999446.1| complement factor H [Sus scrofa]. 89 3e-18
Alignment gi|XP_003122123.1| PREDICTED: sushi, von Willebrand factor type... 86 4e-17
Alignment gi|NP_998980.1| complement decay-accelerating factor [Sus scrof... 84 1e-16
>ref|NP_999053.1| membrane cofactor protein precursor [Sus scrofa].
Length = 363
Score = 494 bits (1271), Expect = e-140
Identities = 229/233 (98%), Positives = 230/233 (98%)
Frame = +1
Query: 106 MMAFCALRKALPCRPENPFSSRCFVEILWVSLALVFLLPMPSDACDEPPKFESMRPQVLN 285
MMAFCALRKALPCRPENPFSSRCFVEILWVSLALVFLLPMPSDACDEPPKFESMRPQ LN
Sbjct: 1 MMAFCALRKALPCRPENPFSSRCFVEILWVSLALVFLLPMPSDACDEPPKFESMRPQFLN 60
Query: 286 TTYRPGDRVEYECRPGFRPMVPALPTSSVCQDDNTWSPLQEACRRKACSNLPDPLNGQVS 465
TTYRPGDRVEYECRPGF+PMVPALPT SVCQDDNTWSPLQEACRRKACSNLPDPLNGQVS
Sbjct: 61 TTYRPGDRVEYECRPGFQPMVPALPTFSVCQDDNTWSPLQEACRRKACSNLPDPLNGQVS 120
Query: 466 YPNGDTLFGSKAQFTCNTGFYIIGAETVYCQVSGNVMAWSEPSPLCEKILCKPPGEIPNG 645
YPNGD LFGSKAQFTCNTGFYIIGAETVYCQVSGNVMAWSEPSPLCEKILCKPPGEIPNG
Sbjct: 121 YPNGDMLFGSKAQFTCNTGFYIIGAETVYCQVSGNVMAWSEPSPLCEKILCKPPGEIPNG 180
Query: 646 KYTNSHKDVFEYNEVVTYSCLSSTGPDEFSLVGESSLFCIGKDEWSSDPPECK 804
KYTNSHKDVFEYNEVVTYSCLSSTGPDEFSLVGESSLFCIGKDEWSSDPPECK
Sbjct: 181 KYTNSHKDVFEYNEVVTYSCLSSTGPDEFSLVGESSLFCIGKDEWSSDPPECK 233
>ref|XP_003130176.1| PREDICTED: membrane cofactor protein-like [Sus scrofa].
Length = 345
Score = 277 bits (708), Expect(2) = 4e-75
Identities = 127/201 (63%), Positives = 156/201 (77%), Gaps = 1/201 (0%)
Frame = +1
Query: 205 LVFLLPMPSDACDEPPKFESMRPQ-VLNTTYRPGDRVEYECRPGFRPMVPALPTSSVCQD 381
LVFLLP+ S+ACD+PP+FESMR Q L TYRPGDR +YECR GF PMVPALPT+SVCQD
Sbjct: 6 LVFLLPIFSEACDDPPRFESMRFQGALQLTYRPGDRAQYECRLGFHPMVPALPTTSVCQD 65
Query: 382 DNTWSPLQEACRRKACSNLPDPLNGQVSYPNGDTLFGSKAQFTCNTGFYIIGAETVYCQV 561
+NTWSPLQEACRRK+C NL DP+NG V+Y NG LFGS AQ+ CN GF +IGA ++C++
Sbjct: 66 NNTWSPLQEACRRKSCPNLGDPVNGLVNYINGSRLFGSHAQYECNEGFSLIGANILHCEI 125
Query: 562 SGNVMAWSEPSPLCEKILCKPPGEIPNGKYTNSHKDVFEYNEVVTYSCLSSTGPDEFSLV 741
SGN +AWS+ P+CE+I C P I NG +T +K+ +EYNE+VTY C S DE+SL+
Sbjct: 126 SGNGVAWSDLPPICERIFCGTPANITNGHFT-VYKEQYEYNELVTYRCDPSDESDEYSLI 184
Query: 742 GESSLFCIGKDEWSSDPPECK 804
G+ L C+G D WSSDPPECK
Sbjct: 185 GDPLLLCVGHDRWSSDPPECK 205
Score = 23.1 bits (48), Expect(2) = 4e-75
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +2
Query: 791 PLSVKVVKCPYPVL 832
P KVVKC YPV+
Sbjct: 201 PPECKVVKCNYPVI 214
>ref|XP_003130174.2| PREDICTED: complement receptor type 1-like [Sus scrofa].
Length = 1207
Score = 152 bits (384), Expect = 3e-37
Identities = 79/214 (36%), Positives = 116/214 (54%), Gaps = 6/214 (2%)
Frame = +1
Query: 178 VEILWVSLALVFLLPMPSDACDEPPKFE--SMRPQVLNTTYRPGDRVEYECRPGFRPMVP 351
+EI W S +P+ C+ P +F+ ++ Q + + G ++YEC P + M
Sbjct: 352 MEIFWNSS-----VPVCESHCNAPDQFQFAKLKSQTNASKFPIGTSLKYECHPEYYKM-- 404
Query: 352 ALPTSSVCQDDNTWSPLQEACRRKACSNLPDPLNGQVSYPNGDTLFGSKAQFTCNTGFYI 531
S C ++ TWS + C+RK+C DP+NG V Y N DT FGS+ F+CNTG+ +
Sbjct: 405 --SFSIKCLENLTWSSAIDVCKRKSCETPSDPVNGMV-YVNTDTQFGSRINFSCNTGYRL 461
Query: 532 IGAETVYCQVSGNVMAWSEPSPLCEKILCKPPGEIPNGKYTNSHKDVFEYNEVVTYSCLS 711
IG + C +SGN + W P+CE+I C PP I NG + +S+++ F Y VVTY C
Sbjct: 462 IGHSSTECVLSGNTVFWDAEPPICERIPCGPPPAIANGDFISSNREYFPYGTVVTYRCNL 521
Query: 712 STGPDEFSLVGESSLFCIGKDE----WSSDPPEC 801
+F LVG S++C KD WS PP+C
Sbjct: 522 GDRRMKFELVGSPSIYCTSKDNQVGIWSGPPPQC 555
Score = 130 bits (326), Expect = 2e-30
Identities = 63/171 (36%), Positives = 91/171 (53%), Gaps = 4/171 (2%)
Frame = +1
Query: 301 GDRVEYECRPGFRPMVPALPTSSVCQDDNTWSPLQEACRRKACSNLPDPLNGQVSYPNGD 480
G ++Y+CRPG+ + S CQ ++ WS + C+RK C L + +NG++ D
Sbjct: 14 GTSLKYKCRPGYYSRI----FSITCQKNSFWSIPEGNCKRKTCGTLAELVNGKMEIDK-D 68
Query: 481 TLFGSKAQFTCNTGFYIIGAETVYCQVSGNVMAWSEPSPLCEKILCKPPGEIPNGKYTNS 660
FGS + CN G+ +IG + C +SGN + W P CE I C PP I NG + +S
Sbjct: 69 MQFGSTVHYFCNDGYRLIGQSSATCVISGNSVIWDNDPPTCESIPCGPPPAIANGDFISS 128
Query: 661 HKDVFEYNEVVTYSCLSSTGPDEFSLVGESSLFCIGKDE----WSSDPPEC 801
+++ F Y VVTY C +F LVG S++C KD WS PP+C
Sbjct: 129 NREYFPYGTVVTYRCNLGDRRMKFELVGSPSIYCTSKDNQVGIWSGPPPQC 179
Score = 129 bits (325), Expect = 2e-30
Identities = 76/204 (37%), Positives = 103/204 (50%), Gaps = 9/204 (4%)
Frame = +1
Query: 217 LPMPSDACDEPPKFESMRPQVLNTTY-RPGDRVEYECRPGFRPMVPALPTSSVCQDDNTW 393
LP S C PPK + + Y PG V Y C PG+ A S C W
Sbjct: 613 LPSCSRICQPPPKILHGKHTPSHRNYFSPGQEVSYICEPGYDLRGAA---SLRCMPQGDW 669
Query: 394 SPLQEACRRKACSNLPDPL-NGQVSYPNGDTLFGSKAQFTCNTGFYIIGAETVYCQVSGN 570
SP C K+C++ D L NG+V +P L G+K F C+ G+ + G YC G
Sbjct: 670 SPAAPRCAAKSCADFLDQLPNGRVLFPLNFQL-GAKVSFVCDEGYQLKGNSASYCISVGM 728
Query: 571 VMAWSEPSPLCEKILCKPPGEIPNGKYTNSHKDVFEYNEVVTYSCLSSTGPDE---FSLV 741
W+ P+CE+I C+PP + NG++ +S+ VF+Y VVTY C TGP+ F LV
Sbjct: 729 KSLWNNTVPVCERISCEPPPAVANGEFYSSNGSVFQYAAVVTYQC--HTGPNGEKLFDLV 786
Query: 742 GESSLFCIGKDE----WSSDPPEC 801
GE S++C +D WSS PP+C
Sbjct: 787 GEQSIYCTSRDNQRGVWSSLPPQC 810
Score = 101 bits (252), Expect = 6e-22
Identities = 66/219 (30%), Positives = 95/219 (43%), Gaps = 7/219 (3%)
Frame = +1
Query: 169 RCFVEILWVSLALVFLLPMPSDACDEPPKF-ESMRPQVLNTTYRPGDRVEYECRPGFRPM 345
+C V WV LP S C PP+ + PG V + C PG+
Sbjct: 857 QCKVNNTWVPE-----LPRCSRVCQPPPEILHGKHTSSHRDDFFPGQEVSFSCEPGYDLR 911
Query: 346 VPALPTSSVCQDDNTWSPLQEACRRKACSNLPDPL-NGQVSYPNGDTLFGSKAQFTCNTG 522
A S C WSP C K+C++ D L NG+V +P L G+K F C G
Sbjct: 912 GTA---SLHCTPQGDWSPAAPRCAVKSCADFLDQLPNGRVLFPLNFQL-GAKVSFICEEG 967
Query: 523 FYIIGAETVYCQVSGNVMAWSEPSPLCEKILCKPPGEIPNGKYTNSHKDVFEYNEVVTYS 702
F + G+ +C + G W+ P+CE+I C P I NGK+ + Y + ++Y
Sbjct: 968 FRLKGSSASHCVLVGMKTLWNSSVPVCEQIFCPNPPAILNGKHIGTSLKDIPYGKEISYM 1027
Query: 703 CLSSTGPDE-FSLVGESSLFCI----GKDEWSSDPPECK 804
C + FSL+G+S++ C G WS P C+
Sbjct: 1028 CDAHPAKGMIFSLIGKSTIHCTSDSQGNGVWSGPAPRCE 1066
Score = 82.0 bits (201), Expect = 5e-16
Identities = 63/228 (27%), Positives = 96/228 (42%), Gaps = 5/228 (2%)
Frame = +1
Query: 217 LPMPSDACDEPPKFESMRPQV-LNTTYRPGDRVEYECRPGFRPMVPALPTSSVCQDDNTW 393
LP S C PP+ + T+ G V Y C+PG+ A S C W
Sbjct: 237 LPSCSRICQLPPEIPHGKHNAGQRNTFSTGQEVSYSCQPGYDLRGAA---SLRCTSQGDW 293
Query: 394 SPLQEACRRKACSNLPDPL-NGQVSYPNGDTLFGSKAQFTCNTGFYIIGAETVYCQVSGN 570
SP C K+C++ D L NG+V +P L G+K F C+ G+ + G+ T +C + G
Sbjct: 294 SPEAPRCAAKSCADFLDQLPNGRVLFPLNFQL-GAKVSFVCDEGYQLKGSSTSHCVLVGM 352
Query: 571 VMAWSEPSPLCEKILCKPPGEIPNGK---YTNSHKDVFEYNEVVTYSCLSSTGPDEFSLV 741
+ W+ P+CE C P + K TN+ K F + Y C P+ + +
Sbjct: 353 EIFWNSSVPVCES-HCNAPDQFQFAKLKSQTNASK--FPIGTSLKYEC----HPEYYKM- 404
Query: 742 GESSLFCIGKDEWSSDPPECKGSQMSISSTPHL*LLVSTLDKNFTTKV 885
S+ C+ WSS CK S P ++ D F +++
Sbjct: 405 -SFSIKCLENLTWSSAIDVCKRKSCETPSDPVNGMVYVNTDTQFGSRI 451
Score = 75.1 bits (183), Expect = 6e-14
Identities = 58/198 (29%), Positives = 80/198 (40%), Gaps = 10/198 (5%)
Frame = +1
Query: 238 CDEPPKFESMRPQVLNTTYRP-GDRVEYECRPGFRPMV------PALPTSSVCQDDNTWS 396
C PP + N Y P G V Y C G R M P++ +S WS
Sbjct: 114 CGPPPAIANGDFISSNREYFPYGTVVTYRCNLGDRRMKFELVGSPSIYCTSKDNQVGIWS 173
Query: 397 -PLQEACRRKACSNLPDPLNGQVSYPNGDTLFG--SKAQFTCNTGFYIIGAETVYCQVSG 567
P + C+ P + +LF QFTC GF I G TV+C
Sbjct: 174 GPPPQCIIPNKCT--PPEVENAFRISEKKSLFSLYETVQFTCQPGFIIKGPSTVHCHAQN 231
Query: 568 NVMAWSEPSPLCEKILCKPPGEIPNGKYTNSHKDVFEYNEVVTYSCLSSTGPDEFSLVGE 747
W P C +I C+ P EIP+GK+ ++ F + V+YSC + L G
Sbjct: 232 K---WGPELPSCSRI-CQLPPEIPHGKHNAGQRNTFSTGQEVSYSCQPG-----YDLRGA 282
Query: 748 SSLFCIGKDEWSSDPPEC 801
+SL C + +WS + P C
Sbjct: 283 ASLRCTSQGDWSPEAPRC 300
Score = 73.6 bits (179), Expect = 2e-13
Identities = 57/196 (29%), Positives = 79/196 (40%), Gaps = 8/196 (4%)
Frame = +1
Query: 238 CDEPPKFESMRPQVLNTTYRP-GDRVEYECRPGFRPMV------PALPTSSVCQDDNTWS 396
C PP + N Y P G V Y C G R M P++ +S WS
Sbjct: 490 CGPPPAIANGDFISSNREYFPYGTVVTYRCNLGDRRMKFELVGSPSIYCTSKDNQVGIWS 549
Query: 397 PLQEACRRKACSNLPDPLNG-QVSYPNGDTLFGSKAQFTCNTGFYIIGAETVYCQVSGNV 573
C P+ N ++S QF C GF + G TV CQ
Sbjct: 550 GPPPQCIIPNICTAPEVENAFRISEKKSLFSLDETVQFRCQHGFVMKGPSTVQCQAQNK- 608
Query: 574 MAWSEPSPLCEKILCKPPGEIPNGKYTNSHKDVFEYNEVVTYSCLSSTGPDEFSLVGESS 753
W P C +I C+PP +I +GK+T SH++ F + V+Y C + L G +S
Sbjct: 609 --WGPELPSCSRI-CQPPPKILHGKHTPSHRNYFSPGQEVSYIC-----EPGYDLRGAAS 660
Query: 754 LFCIGKDEWSSDPPEC 801
L C+ + +WS P C
Sbjct: 661 LRCMPQGDWSPAAPRC 676
Score = 67.4 bits (163), Expect = 1e-11
Identities = 48/187 (25%), Positives = 74/187 (39%), Gaps = 8/187 (4%)
Frame = +1
Query: 301 GDRVEYECRPGFRPMVPALPTSSVCQDDNTWSPLQEACRRKACSNLPDPLNGQVSYPNGD 480
G V Y C G+R + + T + + W C C P NG N +
Sbjct: 72 GSTVHYFCNDGYRLIGQSSATCVISGNSVIWDNDPPTCESIPCGPPPAIANGDFISSNRE 131
Query: 481 TL-FGSKAQFTCNTG-----FYIIGAETVYCQVSGN-VMAWSEPSPLCE-KILCKPPGEI 636
+G+ + CN G F ++G+ ++YC N V WS P P C C PP E+
Sbjct: 132 YFPYGTVVTYRCNLGDRRMKFELVGSPSIYCTSKDNQVGIWSGPPPQCIIPNKCTPP-EV 190
Query: 637 PNGKYTNSHKDVFEYNEVVTYSCLSSTGPDEFSLVGESSLFCIGKDEWSSDPPECKGSQM 816
N + K +F E V ++C F + G S++ C +++W + P C
Sbjct: 191 ENAFRISEKKSLFSLYETVQFTCQPG-----FIIKGPSTVHCHAQNKWGPELPSCSRICQ 245
Query: 817 SISSTPH 837
PH
Sbjct: 246 LPPEIPH 252
Score = 60.8 bits (146), Expect = 1e-09
Identities = 50/222 (22%), Positives = 88/222 (39%), Gaps = 9/222 (4%)
Frame = +1
Query: 163 SSRCFVEILWVSLALVFLLPMPSDACDEPPKFESMRPQVLNTTYRPGDRVEYECRPGFRP 342
S RC + W A +D D+ P + P ++ G +V + C G++
Sbjct: 660 SLRCMPQGDWSPAAPRCAAKSCADFLDQLPNGRVLFP----LNFQLGAKVSFVCDEGYQL 715
Query: 343 MVPALPTSSVCQDDNTWSPLQEACRRKACSNLPDPLNGQVSYPNGDTL-FGSKAQFTCNT 519
+ + W+ C R +C P NG+ NG + + + C+T
Sbjct: 716 KGNSASYCISVGMKSLWNNTVPVCERISCEPPPAVANGEFYSSNGSVFQYAAVVTYQCHT 775
Query: 520 G------FYIIGAETVYCQVSGNVMA-WSEPSPLCEKI-LCKPPGEIPNGKYTNSHKDVF 675
G F ++G +++YC N WS P C + C P E+ NG + ++ +
Sbjct: 776 GPNGEKLFDLVGEQSIYCTSRDNQRGVWSSLPPQCISVNKCTAP-EVENGIRDSGNRSLL 834
Query: 676 EYNEVVTYSCLSSTGPDEFSLVGESSLFCIGKDEWSSDPPEC 801
NEVV ++C F + G +++ C + W + P C
Sbjct: 835 SLNEVVRFTCQPG-----FVMRGSNTVQCKVNNTWVPELPRC 871
>ref|XP_003130504.1| PREDICTED: c4b-binding protein alpha chain-like [Sus scrofa].
Length = 600
Score = 131 bits (330), Expect = 5e-31
Identities = 78/224 (34%), Positives = 116/224 (51%), Gaps = 8/224 (3%)
Frame = +1
Query: 157 PFSSRCFVE--ILWVSLALVFLLPMPSDACDEPP--KFESMRPQVLNTTYRPGDRVEYEC 324
PFS R V IL+ LL C PP +F S ++ T + G ++Y C
Sbjct: 21 PFSRRWRVSDPILFQVTLAAALLATVLGKCGPPPYLQFASPISELNETEFETGTTLKYNC 80
Query: 325 RPGFRPMVPALPTSSVCQDDNTWSPLQEACRRKACSNLPDPLNGQVSYPNGDTLFGSKAQ 504
RPG+R + A C+ TW+ + E C +K C N + LNGQV D GS+ +
Sbjct: 81 RPGYRK-ITAKNHVLTCESRGTWNYI-EFCVKKQCGNPGELLNGQVKVKT-DYSLGSQIE 137
Query: 505 FTCNTGFYIIGAETVYCQVSGNVMAWSEPSPLCEKILCKPPGEIPNGKYTNSHKDVFEYN 684
F+C+ G+ ++G T YC++ + WSE P C + C+PP I NGK+ +D + Y
Sbjct: 138 FSCSEGYVLVGPTTSYCEIQEKGVGWSEYLPRCMIVKCEPPPAISNGKHNGGDEDFYTYG 197
Query: 685 EVVTYSCLSSTGPDEFSLVGESSLFCIGKDE----WSSDPPECK 804
VTYSC S +FS++G++S+ C+ ++E WS PP CK
Sbjct: 198 SSVTYSCDS-----DFSMLGKASISCLVENETIGVWSPSPPICK 236
Score = 70.9 bits (172), Expect = 1e-12
Identities = 50/175 (28%), Positives = 78/175 (44%), Gaps = 3/175 (1%)
Frame = +1
Query: 289 TYRPGDRVEYECRPGFRPMVPALPTSSVCQDDNTWSPLQEACRRKACSNLPDPLNGQVSY 468
TY GD++ Y C + + S C + TW P C R C N P +G +
Sbjct: 390 TYYSGDKISYTCNNNEK-----VRYVSSCSEQGTWRPRMPVCDR-GCDNPPVVAHGH--H 441
Query: 469 PNGDTLFGSKAQ---FTCNTGFYIIGAETVYCQVSGNVMAWSEPSPLCEKILCKPPGEIP 639
TLFG K + C+ G+ ++G + ++C S WS +P C+ KP I
Sbjct: 442 TQIITLFGIKKDEVVYKCDEGYTLVGEDRLFCHYS----RWSPAAPRCKAQCLKPV--ID 495
Query: 640 NGKYTNSHKDVFEYNEVVTYSCLSSTGPDEFSLVGESSLFCIGKDEWSSDPPECK 804
+GK + +D + +E++T C S G LVG ++ CI W P+C+
Sbjct: 496 HGKLSVD-QDKYTESEIITVQCDSGYG-----LVGPQNITCIEDRTWHPQVPKCE 544
Score = 60.5 bits (145), Expect = 2e-09
Identities = 51/194 (26%), Positives = 81/194 (41%), Gaps = 11/194 (5%)
Frame = +1
Query: 238 CDEPPKFESMRPQVLNTT-YRPGDRVEYECRPGFRPMVPALPTSSVCQDDN----TWSPL 402
C+ PP + + + Y G V Y C F + A S C +N WSP
Sbjct: 175 CEPPPAISNGKHNGGDEDFYTYGSSVTYSCDSDFSMLGKA---SISCLVENETIGVWSPS 231
Query: 403 QEACRRKACSNLPDPLNGQVSYPNGDTL-FGSKAQFTCNTGFYIIGAETVYCQVSGNVMA 579
C++ C P NG+++ G + F C+ GF + G+ ++C+ N
Sbjct: 232 PPICKKINCLQ-PVVKNGKITSGFGPIYAYKESILFGCDKGFRLKGSNLIHCEADSN--- 287
Query: 580 WSEPSPLCEKILCKPPGEIPNG-----KYTNSHKDVFEYNEVVTYSCLSSTGPDEFSLVG 744
WS P P+CE C IP+ Y+ ++V+ + V++Y CLS P G
Sbjct: 288 WSPPPPICELHGCAGLPNIPHATWRRYSYSLPTEEVYGVDTVMSYYCLSGYRP---KTSG 344
Query: 745 ESSLFCIGKDEWSS 786
++ C +WSS
Sbjct: 345 SLTVTCQEDFKWSS 358
>ref|XP_003357473.1| PREDICTED: complement receptor type 2 [Sus scrofa].
Length = 1035
Score = 100 bits (249), Expect = 1e-21
Identities = 64/221 (28%), Positives = 100/221 (45%), Gaps = 16/221 (7%)
Frame = +1
Query: 220 PMPSDACDEPPKFESMRPQVLN--------TTYRPGDRVEYECRPGFRPMVPALPTSSV- 372
P+P+ D P + S+ P + + ++ PG V Y C PG+ L ++
Sbjct: 143 PLPTCESDFPLECPSL-PTIAHGRHTGEDVASFAPGFSVTYSCEPGYL----LLGEKTIR 197
Query: 373 CQDDNTWSPLQEACRRKACSNLPDPLNGQVSYPNGDTLFGSKAQFTCNTGFYIIGAETVY 552
C W+ + C+ C LNGQ+ + G F+CN G+ ++G+ +
Sbjct: 198 CLSSGNWNAVSPTCKEAECQPPGPFLNGQIK-KSESLRVGETVHFSCNEGYRLLGSPSSQ 256
Query: 553 CQVSGNVMAWSEPSPLCEKILCKPPGEIPNGKYTNSHKDVFEYNEVVTYSCLSSTGPDE- 729
C + G W++ P+CEKI C PP I NG++T S Y VTY+C GP+E
Sbjct: 257 CVIVGQRPFWTK-MPICEKIFCSPPPPIRNGRHTGSSSVNIPYGSSVTYTC--DPGPEEG 313
Query: 730 --FSLVGESSLFCIGKDE----WSSDPPECKGSQMSISSTP 834
F L+GES++ C + WS P C+ S + P
Sbjct: 314 VNFILIGESTIHCTTDSQKNGIWSGPAPHCELSVSEVRCPP 354
Score = 89.4 bits (220), Expect = 3e-18
Identities = 62/204 (30%), Positives = 92/204 (45%), Gaps = 8/204 (3%)
Frame = +1
Query: 217 LPMPSDACDEPPKF-ESMRPQVLNTTYRPGDRVEYECRPGFRPMVPALPTSSVCQDDNTW 393
+P+ C PPK + + PG V+Y C PG+ V S C D W
Sbjct: 404 VPVCEKDCQAPPKILHGQKEDKHVIRFDPGTSVKYSCDPGY---VLVGEESIHCTIDGVW 460
Query: 394 SPLQEACRRKACSNLPDPLNGQVSYPNGDTLFGSKAQFTCNTGFYIIGAETVYCQVSGNV 573
P C+ C+ P QV + + +C+ G+ + +E+VY Q+ +
Sbjct: 461 IPTVPTCKVAECN----PSGKQVFKKPTNQIIRPDVNSSCDEGYRL--SESVY-QLCQDT 513
Query: 574 MAWSEPSPLCEKILCKPPGEIPNGKYTNSHKDVFEYNEVVTYSCLSSTGPDE---FSLVG 744
+ W LC++I C PP I NG +T S Y VTY+C + GP+ F+L+G
Sbjct: 514 IPWYMEIRLCKEITCPPPPLIYNGAHTGSASGEVLYGTTVTYTC--NPGPERGVTFNLIG 571
Query: 745 ESSLFCIGKDE----WSSDPPECK 804
ES++ CI D+ WS PP CK
Sbjct: 572 ESTIRCISNDQETGVWSGPPPLCK 595
Score = 73.9 bits (180), Expect = 1e-13
Identities = 47/182 (25%), Positives = 81/182 (44%), Gaps = 12/182 (6%)
Frame = +1
Query: 295 RPGDRVEYECRPGFRPMVPALPTSSVCQDDNTWSPLQEACRRKACSNLPDPLNGQVSYPN 474
R G+ V + C G+R + + W+ + C + CS P NG+ + +
Sbjct: 234 RVGETVHFSCNEGYRLLGSPSSQCVIVGQRPFWTKMP-ICEKIFCSPPPPIRNGRHTGSS 292
Query: 475 GDTL-FGSKAQFTCNTG------FYIIGAETVYCQVSGNVMA-WSEPSPLCE----KILC 618
+ +GS +TC+ G F +IG T++C WS P+P CE ++ C
Sbjct: 293 SVNIPYGSSVTYTCDPGPEEGVNFILIGESTIHCTTDSQKNGIWSGPAPHCELSVSEVRC 352
Query: 619 KPPGEIPNGKYTNSHKDVFEYNEVVTYSCLSSTGPDEFSLVGESSLFCIGKDEWSSDPPE 798
PP +I G+ ++ KD + YN+ V ++CL F++ G + C + W P
Sbjct: 353 PPP-QILRGQISSRKKDQYSYNDTVVFACLFG-----FTMKGSKEIRCNAQGTWEPSVPV 406
Query: 799 CK 804
C+
Sbjct: 407 CE 408
Score = 71.2 bits (173), Expect = 9e-13
Identities = 50/199 (25%), Positives = 82/199 (41%), Gaps = 6/199 (3%)
Frame = +1
Query: 226 PSDACDEPPKFESMRPQVLNTTYRPGDRVEYECRPGFRPMVPALPTSSVCQDDNTWSPLQ 405
P C P + N+++ D V C PGF + S CQ +N W P
Sbjct: 785 PVTHCPNPEVAHGYKLNNTNSSFSHNDIVVIACEPGF---IMNGSQSIRCQTNNKWVPDV 841
Query: 406 EACRRKACSNLPDPLNGQVSYPN---GDTLF---GSKAQFTCNTGFYIIGAETVYCQVSG 567
C +KA P+ ++ Y N GD L G ++CN G+ ++G + C G
Sbjct: 842 PTCIKKAFFGCHRPV--KIPYGNHTGGDILRFSPGMSVLYSCNQGYLLVGEALLLCTHEG 899
Query: 568 NVMAWSEPSPLCEKILCKPPGEIPNGKYTNSHKDVFEYNEVVTYSCLSSTGPDEFSLVGE 747
N W++P+P C+++ C P + + + +++Y VVT C + ++L G
Sbjct: 900 N---WNQPAPYCKEVNCSFPEHVNGIQNGLEPRKMYQYGAVVTLEC-----EEGYTLEGS 951
Query: 748 SSLFCIGKDEWSSDPPECK 804
C W+ CK
Sbjct: 952 PQSQCQEDHRWNPPLAVCK 970
Score = 70.1 bits (170), Expect = 2e-12
Identities = 55/202 (27%), Positives = 79/202 (39%), Gaps = 7/202 (3%)
Frame = +1
Query: 217 LPMPSDACDEPPKFESMRPQVLNTTYRPGDRVEYECRPGFRPMVPALPTSSV--CQDDNT 390
L +P+ C + V Y D V ++C GF L SS C+ DNT
Sbjct: 596 LSIPTVQCSHVHIENGYKISVKEAPYFYNDTVTFKCDDGF-----TLKGSSRIRCKADNT 650
Query: 391 WSPLQEACRRKACSNLPDPLNG-QVSYPNGDTLFGSKAQFTCNTGFYIIGAETVYCQVSG 567
W P C + C L + L +P TC G+ + G CQ
Sbjct: 651 WDPEIPVCEKVQCQPLKEDLQELPADWPV------VSVNITCQEGYQLTGHVYQKCQGDE 704
Query: 568 NVMAWSEPSPLCEKILCKPPGEIPNGKYTNSHKDVFEYNEVVTYSCLSSTGPDEFSLVGE 747
+ + W + PLC+ I C+P I NG++ F Y V+Y C + F L+GE
Sbjct: 705 DAV-WLQKIPLCKVIHCQPLPVIKNGRHRGVVGKYFVYGNKVSYEC-----DEGFDLLGE 758
Query: 748 SSLFCI----GKDEWSSDPPEC 801
+++C G WS P C
Sbjct: 759 KTVWCTNDSKGYGSWSGPLPRC 780
Score = 64.3 bits (155), Expect = 1e-10
Identities = 59/224 (26%), Positives = 95/224 (42%), Gaps = 15/224 (6%)
Frame = +1
Query: 187 LWVSLALVFLLPMPSDACDEPPKFESMRPQVLNTTYRPGDRVEYECRPGFRPMVPALPTS 366
LWV LAL+ + + CD PP ++ R + V Y C FR ++
Sbjct: 7 LWVFLALI-VPGVLGIFCDPPPAIKNGRNSYFSGPIPVNSVVRYSCSNSFR-LIGERILF 64
Query: 367 SVCQD--DNTW---SPLQEACRRKACSNLPDPLNGQVS------YPNGDTLFGSKAQFTC 513
+ +D + W +P+ E + + P L G S Y +GD++ FTC
Sbjct: 65 CISKDKVNGFWDKAAPVCEYYDKNSICPEPTVLGGHKSRISRPPYRHGDSV-----TFTC 119
Query: 514 NTGFYIIGAETVYCQVSGNVMAWS-EPSPLCEK---ILCKPPGEIPNGKYTNSHKDVFEY 681
N F + G +TV+C+ + W P P CE + C I +G++T F
Sbjct: 120 NANFTMKGNKTVWCRAN---KTWGPTPLPTCESDFPLECPSLPTIAHGRHTGEDVASFAP 176
Query: 682 NEVVTYSCLSSTGPDEFSLVGESSLFCIGKDEWSSDPPECKGSQ 813
VTYSC + L+GE ++ C+ W++ P CK ++
Sbjct: 177 GFSVTYSC-----EPGYLLLGEKTIRCLSSGNWNAVSPTCKEAE 215
Score = 62.8 bits (151), Expect = 3e-10
Identities = 56/208 (26%), Positives = 81/208 (38%), Gaps = 12/208 (5%)
Frame = +1
Query: 238 CDEPPKFESMRPQVLNTTYRP-GDRVEYECRPGFRPMV-------PALPTSSVCQDDNTW 393
C PP + R ++ P G V Y C PG V + ++ Q + W
Sbjct: 277 CSPPPPIRNGRHTGSSSVNIPYGSSVTYTCDPGPEEGVNFILIGESTIHCTTDSQKNGIW 336
Query: 394 SPLQEACRRKACS-NLPDP--LNGQVSYPNGDTL-FGSKAQFTCNTGFYIIGAETVYCQV 561
S C P P L GQ+S D + F C GF + G++ + C
Sbjct: 337 SGPAPHCELSVSEVRCPPPQILRGQISSRKKDQYSYNDTVVFACLFGFTMKGSKEIRCNA 396
Query: 562 SGNVMAWSEPSPLCEKILCKPPGEIPNGKYTNSHKDVFEYNEVVTYSCLSSTGPDEFSLV 741
G W P+CEK C+ P +I +G+ + H F+ V YSC + LV
Sbjct: 397 QGT---WEPSVPVCEKD-CQAPPKILHGQKEDKHVIRFDPGTSVKYSC-----DPGYVLV 447
Query: 742 GESSLFCIGKDEWSSDPPECKGSQMSIS 825
GE S+ C W P CK ++ + S
Sbjct: 448 GEESIHCTIDGVWIPTVPTCKVAECNPS 475
>ref|XP_003355040.1| PREDICTED: CUB and sushi domain-containing protein 3, partial [Sus
scrofa].
Length = 1947
Score = 91.7 bits (226), Expect = 6e-19
Identities = 59/177 (33%), Positives = 80/177 (45%), Gaps = 1/177 (0%)
Frame = +1
Query: 274 QVLNTTYRPGDRVEYECRPGFRPMVPALPTSSVCQDDNTWSPLQEACRRKACSNLPDPLN 453
QV+ Y D V Y+C PGFR + ++ +CQ D+ WS +C +C + P+
Sbjct: 1067 QVIGENYGYRDTVVYQCNPGFRLIGSSV---RICQQDHNWSGQLPSCVPVSCGHPGSPIY 1123
Query: 454 GQVSYPNGDTLFGSKAQFTCNTGFYIIGAETVYCQVSGNVMAWSEPSPLCEKILCKPPGE 633
G+ S NG F F+CNTG+ + G CQ + WS P P+C+ + C PG
Sbjct: 1124 GRTS-GNGFN-FNDVVTFSCNTGYLMQGPTKAQCQAN---RQWSHPPPVCKVVNCSDPGI 1178
Query: 634 IPNGKYTNS-HKDVFEYNEVVTYSCLSSTGPDEFSLVGESSLFCIGKDEWSSDPPEC 801
N K + F Y VV Y C P F L G S L C +W PEC
Sbjct: 1179 PANSKRESKIEHGNFTYGTVVFYDC----NPGYF-LFGSSVLICQPNGQWDKPLPEC 1230
Score = 81.6 bits (200), Expect = 6e-16
Identities = 55/195 (28%), Positives = 85/195 (43%), Gaps = 2/195 (1%)
Frame = +1
Query: 304 DRVEYECRPGFRPMVPALPTSSVCQDDNTWSPLQEACRRKACSNLPDPLNG--QVSYPNG 477
D V + C G+ + PT + CQ + WS C+ CS+ P N + +G
Sbjct: 1135 DVVTFSCNTGY---LMQGPTKAQCQANRQWSHPPPVCKVVNCSDPGIPANSKRESKIEHG 1191
Query: 478 DTLFGSKAQFTCNTGFYIIGAETVYCQVSGNVMAWSEPSPLCEKILCKPPGEIPNGKYTN 657
+ +G+ + CN G+++ G+ + CQ +G W +P P C I C PG PN +
Sbjct: 1192 NFTYGTVVFYDCNPGYFLFGSSVLICQPNGQ---WDKPLPECIMIDCGHPGVPPNAVLSG 1248
Query: 658 SHKDVFEYNEVVTYSCLSSTGPDEFSLVGESSLFCIGKDEWSSDPPECKGSQMSISSTPH 837
+ + + V YSC TG + +L+G+SS C WS P C G P
Sbjct: 1249 ---EKYTFGSTVHYSC---TG--KRTLLGQSSRTCQLNGHWSGSQPHCSGDATGTCGDPG 1300
Query: 838 L*LLVSTLDKNFTTK 882
S + +F TK
Sbjct: 1301 TPGHGSRQESDFRTK 1315
Score = 75.9 bits (185), Expect = 4e-14
Identities = 54/172 (31%), Positives = 72/172 (41%), Gaps = 2/172 (1%)
Frame = +1
Query: 292 YRPGDRVEYECRPGFRPMVPALPTSSVCQDDNTWSPLQEA--CRRKACSNLPDPLNGQVS 465
Y +V + C PG+ + PA S C + TWS E C+ +C LP P NG
Sbjct: 955 YEYKTKVVFSCDPGYHGLGPA---SIECLPNGTWSWRNERPYCQIISCGELPTPPNGNKI 1011
Query: 466 YPNGDTLFGSKAQFTCNTGFYIIGAETVYCQVSGNVMAWSEPSPLCEKILCKPPGEIPNG 645
T +GS A FTC++GF ++G+ C SG WS C C P I NG
Sbjct: 1012 --GTQTSYGSTAIFTCDSGFMLVGSAVRECLSSG---LWSGSETRCLAGHCGVPELIVNG 1066
Query: 646 KYTNSHKDVFEYNEVVTYSCLSSTGPDEFSLVGESSLFCIGKDEWSSDPPEC 801
+ + + Y + V Y C F L+G S C WS P C
Sbjct: 1067 QVIGEN---YGYRDTVVYQCNPG-----FRLIGSSVRICQQDHNWSGQLPSC 1110
Score = 75.9 bits (185), Expect = 4e-14
Identities = 56/202 (27%), Positives = 82/202 (40%), Gaps = 3/202 (1%)
Frame = +1
Query: 238 CDEPPKFESMRPQVLNTTYRPGDRVEYECRPGFRPMVPALPTSSVCQDDNTWSPLQEACR 417
C PP+ + R + T + G + Y C PG+ PA+ T C + TWS C
Sbjct: 1473 CPTPPQISNGRLE--GTNFDWGFSISYICSPGYELSFPAVLT---CVGNGTWSGEVPQCL 1527
Query: 418 RKACSNLPDPLNGQVSYPNGDTLFGSKAQFTCNTGFYIIGAETVYCQVSGNVMAWSEPSP 597
K C + P G+ ++ S+ F+CN+ F ++G+ T CQ G WS SP
Sbjct: 1528 PKFCGDPGIPAQGKRE--GKSFIYQSEVSFSCNSPFILVGSSTRICQADG---TWSGSSP 1582
Query: 598 LC---EKILCKPPGEIPNGKYTNSHKDVFEYNEVVTYSCLSSTGPDEFSLVGESSLFCIG 768
C + C PG +G N+ F+ VV + C L G ++ C+
Sbjct: 1583 HCIEPTRTSCDNPGVPRHGSQNNTFG--FQVGSVVQFHCKKG-----HLLQGSTTRTCLP 1635
Query: 769 KDEWSSDPPECKGSQMSISSTP 834
WS PEC TP
Sbjct: 1636 DLTWSGIQPECTPHSCKQPETP 1657
Score = 70.9 bits (172), Expect = 1e-12
Identities = 49/170 (28%), Positives = 67/170 (39%)
Frame = +1
Query: 292 YRPGDRVEYECRPGFRPMVPALPTSSVCQDDNTWSPLQEACRRKACSNLPDPLNGQVSYP 471
Y G V Y C+PG+ + + C + TWS + CR C P NG++
Sbjct: 1429 YVVGQNVSYMCQPGYTMELNGSRIRT-CTTNGTWSGVMPTCRAVTCPTPPQISNGRLEGT 1487
Query: 472 NGDTLFGSKAQFTCNTGFYIIGAETVYCQVSGNVMAWSEPSPLCEKILCKPPGEIPNGKY 651
N D +G + C+ G+ + + C +G WS P C C PG GK
Sbjct: 1488 NFD--WGFSISYICSPGYELSFPAVLTCVGNG---TWSGEVPQCLPKFCGDPGIPAQGKR 1542
Query: 652 TNSHKDVFEYNEVVTYSCLSSTGPDEFSLVGESSLFCIGKDEWSSDPPEC 801
F Y V++SC S F LVG S+ C WS P C
Sbjct: 1543 EGKS---FIYQSEVSFSCNS-----PFILVGSSTRICQADGTWSGSSPHC 1584
Score = 70.1 bits (170), Expect = 2e-12
Identities = 51/180 (28%), Positives = 77/180 (42%), Gaps = 5/180 (2%)
Frame = +1
Query: 277 VLNTTYRPGDRVEYECRPGFRPMVPALPTSSVCQDDNTWSPLQEA--CRRKACSNLPDPL 450
+L T Y G RV Y C G+R L T++VCQ D TWS + C C ++
Sbjct: 883 ILTTDYLVGTRVTYFCNDGYRLSSKEL-TTAVCQSDGTWSNHNKTPRCVVVTCPSINSFT 941
Query: 451 --NGQVSYPNGDTL-FGSKAQFTCNTGFYIIGAETVYCQVSGNVMAWSEPSPLCEKILCK 621
+G+ NG + +K F+C+ G++ +G ++ C +G +W P C+ I C
Sbjct: 942 LEHGRWRIVNGSHYEYKTKVVFSCDPGYHGLGPASIECLPNG-TWSWRNERPYCQIISC- 999
Query: 622 PPGEIPNGKYTNSHKDVFEYNEVVTYSCLSSTGPDEFSLVGESSLFCIGKDEWSSDPPEC 801
GE+P N Y ++C S F LVG + C+ WS C
Sbjct: 1000 --GELPTPPNGNKIGTQTSYGSTAIFTCDSG-----FMLVGSAVRECLSSGLWSGSETRC 1052
Score = 68.2 bits (165), Expect = 7e-12
Identities = 52/171 (30%), Positives = 70/171 (40%), Gaps = 1/171 (0%)
Frame = +1
Query: 292 YRPGDRVEYECRPGFRPMVPALPTSSVCQDDNTWSPLQEACRRKACSNLPDP-LNGQVSY 468
Y G V Y C G R ++ +S CQ + WS Q C A DP G S
Sbjct: 1251 YTFGSTVHYSCT-GKRTLLGQ--SSRTCQLNGHWSGSQPHCSGDATGTCGDPGTPGHGSR 1307
Query: 469 PNGDTLFGSKAQFTCNTGFYIIGAETVYCQVSGNVMAWSEPSPLCEKILCKPPGEIPNGK 648
D S +F C+TG+ + G+E C +G +W+ P C+ I C PG NGK
Sbjct: 1308 QESDFRTKSSVRFACDTGYILHGSEERTCLANG---SWTGRQPECKAIQCGNPGTTANGK 1364
Query: 649 YTNSHKDVFEYNEVVTYSCLSSTGPDEFSLVGESSLFCIGKDEWSSDPPEC 801
D ++ V YSC+ + + L G S C WS P C
Sbjct: 1365 VFRI--DGTTFSSSVIYSCI-----EGYILSGPSVRQCTANGTWSGTLPNC 1408
Score = 55.5 bits (132), Expect = 5e-08
Identities = 43/171 (25%), Positives = 64/171 (37%)
Frame = +1
Query: 292 YRPGDRVEYECRPGFRPMVPALPTSSVCQDDNTWSPLQEACRRKACSNLPDPLNGQVSYP 471
+R V + C G+ + C + +W+ Q C+ C N NG+V
Sbjct: 1312 FRTKSSVRFACDTGY---ILHGSEERTCLANGSWTGRQPECKAIQCGNPGTTANGKVFRI 1368
Query: 472 NGDTLFGSKAQFTCNTGFYIIGAETVYCQVSGNVMAWSEPSPLCEKILCKPPGEIPNGKY 651
+G T F S ++C G+ + G C +G WS P C I C+ PG NG
Sbjct: 1369 DGTT-FSSSVIYSCIEGYILSGPSVRQCTANGT---WSGTLPNCTIISCEDPGIPANGL- 1423
Query: 652 TNSHKDVFEYNEVVTYSCLSSTGPDEFSLVGESSLFCIGKDEWSSDPPECK 804
+ D + + V+Y C L G C WS P C+
Sbjct: 1424 --RYGDDYVVGQNVSYMCQPGY---TMELNGSRIRTCTTNGTWSGVMPTCR 1469
Score = 51.2 bits (121), Expect = 9e-07
Identities = 43/178 (24%), Positives = 64/178 (35%), Gaps = 3/178 (1%)
Frame = +1
Query: 310 VEYECRPGFRPMVPALPTSSVCQDDNTWSPLQEAC---RRKACSNLPDPLNGQVSYPNGD 480
V + C P + ++ +CQ D TWS C R +C N P +G + G
Sbjct: 1553 VSFSCNS---PFILVGSSTRICQADGTWSGSSPHCIEPTRTSCDNPGVPRHGSQNNTFGF 1609
Query: 481 TLFGSKAQFTCNTGFYIIGAETVYCQVSGNVMAWSEPSPLCEKILCKPPGEIPNGKYTNS 660
+ GS QF C G + G+ T C + WS P C CK P +
Sbjct: 1610 QV-GSVVQFHCKKGHLLQGSTTRTCLPD---LTWSGIQPECTPHSCKQPETPAHANVVGM 1665
Query: 661 HKDVFEYNEVVTYSCLSSTGPDEFSLVGESSLFCIGKDEWSSDPPECKGSQMSISSTP 834
D+ + + Y+C P F G C + W+ P C+ + P
Sbjct: 1666 --DLPSHGYTLIYTCQ----PGFFLAGGTEHRVCRSDNTWTGKVPVCEAGSKILVKDP 1717
>ref|NP_999433.1| E-selectin [Sus scrofa].
Length = 482
Score = 91.7 bits (226), Expect = 6e-19
Identities = 59/208 (28%), Positives = 89/208 (42%), Gaps = 7/208 (3%)
Frame = +1
Query: 232 DACDEPPKFESMRPQVL--NTTYRPGDRVEYECRPGFRPMVPALPTSSVCQDDNTWSPLQ 405
DA + P PQ L NTT +EC+ GF + P C +W +
Sbjct: 182 DALENPVNGVVTCPQSLPWNTT------CAFECKEGFELIGPE---HLQCTSSGSWDGKK 232
Query: 406 EACRRKACSNLPDPLNGQVSYPN---GDTLFGSKAQFTCNTGFYIIGAETVYCQVSGNVM 576
C+ C + P NG VSY + G+ + S FTC GF + G + C G
Sbjct: 233 PTCKAVTCDTVGHPQNGDVSYNHSSIGEFAYKSTCHFTCAEGFGLQGPAQIECTAQGQ-- 290
Query: 577 AWSEPSPLCEKILCKPPGEIPNG--KYTNSHKDVFEYNEVVTYSCLSSTGPDEFSLVGES 750
W++ +P+C+ + C + NG K+T+S F YN +SC + F L G +
Sbjct: 291 -WTQQAPVCKAVKCPAVSQPKNGFVKFTHSPNGEFTYNSSCAFSC-----EEGFELRGSA 344
Query: 751 SLFCIGKDEWSSDPPECKGSQMSISSTP 834
L C + +W+ + P C+ Q S P
Sbjct: 345 QLACTSQGQWTQEVPSCQAVQCSSLEVP 372
>ref|NP_999446.1| complement factor H [Sus scrofa].
Length = 1234
Score = 89.4 bits (220), Expect = 3e-18
Identities = 67/232 (28%), Positives = 104/232 (44%), Gaps = 10/232 (4%)
Frame = +1
Query: 169 RCFVEILWVSLALVFLLPMPSDACDEPP---KFESMRPQVLNTTYRPGDRVEYECRPGFR 339
RC + +W+ L V + ++ C EPP + E + TY G + Y+CRPG+R
Sbjct: 2 RCPAKFVWLILWTVCV----AEDCREPPPRKETEIVSGSWTEQTYPEGTQATYKCRPGYR 57
Query: 340 PMVPALPTSSVCQDDNTWSPLQEA--CRRKACSNLPDPLNGQVSYPNGDTL-FGSKAQFT 510
+ + VC+ D W L + CR+K C + D G G +G+K +T
Sbjct: 58 TLGSIV---MVCK-DGKWVSLHPSRICRKKPCGHPGDTSFGSFHLAVGTQFEYGAKVVYT 113
Query: 511 CNTGFYIIGAETV-YCQVSGNVMAWSEPSPLCEKILCKPPGEIPNGKYTNSHKD---VFE 678
C+ G+ ++G C +G W+ PLCE + C P E NG+ + + +
Sbjct: 114 CDEGYQMLGEINFRECDTNG----WTNNIPLCEVVKCLPVTEPENGRIVSGALEPDQEYT 169
Query: 679 YNEVVTYSCLSSTGPDEFSLVGESSLFCIGKDEWSSDPPECKGSQMSISSTP 834
Y +VV + C + +SL G + C WS D P+C G IS TP
Sbjct: 170 YGQVVQFQCNAG-----YSLDGPKQIHCSAGGVWSGDKPKCVG----ISCTP 212
Score = 67.0 bits (162), Expect = 2e-11
Identities = 58/198 (29%), Positives = 84/198 (42%), Gaps = 11/198 (5%)
Frame = +1
Query: 190 WVSLALVFLLPMPSDACDEPP-------KFESMRPQVLNTTYRPGDRVEYECRPGFRPMV 348
WVSL PS C + P F S V T + G +V Y C G++ +
Sbjct: 71 WVSLH-------PSRICRKKPCGHPGDTSFGSFHLAV-GTQFEYGAKVVYTCDEGYQMLG 122
Query: 349 PALPTSSVCQDDNTWSPLQEACRRKACSNLPDPLNGQVSY----PNGDTLFGSKAQFTCN 516
C D N W+ C C + +P NG++ P+ + +G QF CN
Sbjct: 123 EI--NFREC-DTNGWTNNIPLCEVVKCLPVTEPENGRIVSGALEPDQEYTYGQVVQFQCN 179
Query: 517 TGFYIIGAETVYCQVSGNVMAWSEPSPLCEKILCKPPGEIPNGKYTNSHKDVFEYNEVVT 696
G+ + G + ++C G WS P C I C PP I NG Y K++++ NE V
Sbjct: 180 AGYSLDGPKQIHCSAGG---VWSGDKPKCVGISCTPP-NILNG-YPIISKEIYKANERVQ 234
Query: 697 YSCLSSTGPDEFSLVGES 750
Y C + E+S GE+
Sbjct: 235 YKCSAGF---EYSERGET 249
Score = 65.1 bits (157), Expect = 6e-11
Identities = 55/210 (26%), Positives = 88/210 (41%), Gaps = 3/210 (1%)
Frame = +1
Query: 220 PMPSDACDEPPKFESMRPQVLNTTYRPGDRVEYECRPGFRPMVPALPTSSVCQDDNTWSP 399
P+ +CD P E+ R + T ++ D V+YEC+ GF S VC +D WS
Sbjct: 501 PVCIKSCDAPLP-ENARIKSDGTWFKLNDTVDYECQQGFESRNGDTAGSIVCGEDG-WSD 558
Query: 400 LQEACRRKACSNLPDPLNGQVSYPNGDTLFGSKAQFTCNTGFYIIGAETVYCQVSGNVMA 579
+ AC + C + G +F C ++GA++V C G
Sbjct: 559 -KPACYERECITPGIKSYLDAEPKHNKFKVGGVLKFHCRERRVMLGADSVQCYHFG---- 613
Query: 580 WSEPSPLC---EKILCKPPGEIPNGKYTNSHKDVFEYNEVVTYSCLSSTGPDEFSLVGES 750
WS P C + C PP ++ NG+ + K ++++EVV Y C F + G
Sbjct: 614 WSPNLPTCKAGQVKSCAPPPQLLNGEVKETQKGEYQHSEVVEYVC-----NPRFLMKGSH 668
Query: 751 SLFCIGKDEWSSDPPECKGSQMSISSTPHL 840
+ C+ EW++ P C + + P L
Sbjct: 669 KIQCV-DGEWTT-LPVCIEEERTCGDIPDL 696
Score = 60.1 bits (144), Expect = 2e-09
Identities = 50/196 (25%), Positives = 73/196 (37%), Gaps = 11/196 (5%)
Frame = +1
Query: 238 CDEPPKF-----------ESMRPQVLNTTYRPGDRVEYECRPGFRPMVPALPTSSVCQDD 384
C EPP+ E R Y G R+ Y C GF + +
Sbjct: 869 CSEPPEIDHGTIQSPGSAEERREMFEPKKYAHGTRLSYTCEDGFE-----ISEKEIICHM 923
Query: 385 NTWSPLQEACRRKACSNLPDPLNGQVSYPNGDTLFGSKAQFTCNTGFYIIGAETVYCQVS 564
WS L + C + C+ P+ NG V+ L+G + ++C+ GF I G ++ C
Sbjct: 924 GKWSSLPQ-CVGRPCAPPPEIQNGAVAQEKDSYLYGEEVTYSCDEGFGIDGPASIRCLGE 982
Query: 565 GNVMAWSEPSPLCEKILCKPPGEIPNGKYTNSHKDVFEYNEVVTYSCLSSTGPDEFSLVG 744
WS P P C C + K ++ E VT+ CL F L G
Sbjct: 983 ----KWSHP-PECINTDCFDLPTFNDAVVIGPKKPSYKSGEQVTFKCL-----QYFQLEG 1032
Query: 745 ESSLFCIGKDEWSSDP 792
+++ CI K W P
Sbjct: 1033 PNTIRCI-KSRWIGKP 1047
Score = 55.5 bits (132), Expect = 5e-08
Identities = 57/199 (28%), Positives = 88/199 (44%), Gaps = 2/199 (1%)
Frame = +1
Query: 211 FLLPMPSDACDEPPKFESMRPQVLNTTYRPGDRVEYECRPGFRPMVPALPTSSVCQDDNT 390
F LP +DA PK S Y+ G++V ++C F+ P +++ +
Sbjct: 996 FDLPTFNDAVVIGPKKPS---------YKSGEQVTFKCLQYFQLEGP----NTIRCIKSR 1042
Query: 391 WSPLQEACRRKACSNLPDPLNGQVSYPNGDTLFGSKAQFTCNTGFYIIGAETVYCQVSGN 570
W + ACR +C N P N + G +A++ C + + G V C +G+
Sbjct: 1043 WIG-KPACRDVSCVNPPSVENAVILDKRSRYQPGERARYECIEPYALYGDVEVMC-FNGS 1100
Query: 571 VMAWSEPSPLCE--KILCKPPGEIPNGKYTNSHKDVFEYNEVVTYSCLSSTGPDEFSLVG 744
W++P P C+ K C PP I NG T+ V+ VV Y C S + L G
Sbjct: 1101 ---WTKP-PQCKDSKGKCGPPPPIDNGDTTSFPLPVYPPGTVVEYQCQS-----YYELEG 1151
Query: 745 ESSLFCIGKDEWSSDPPEC 801
SS+ C +W S+PP+C
Sbjct: 1152 SSSIKC-ENGQW-SEPPKC 1168
Score = 52.4 bits (124), Expect = 4e-07
Identities = 49/168 (29%), Positives = 69/168 (41%), Gaps = 1/168 (0%)
Frame = +1
Query: 292 YRPGDRVEYECRPGFRPMVPALPTSSVCQDDNTWSPLQEACRRKACSNLPDPLNGQVSYP 471
Y G V+++C G+ P C WS + C +C+ P+ LNG
Sbjct: 168 YTYGQVVQFQCNAGYSLDGPK---QIHCSAGGVWSGDKPKCVGISCTP-PNILNGYPIIS 223
Query: 472 NGDTLFGSKAQFTCNTGF-YIIGAETVYCQVSGNVMAWSEPSPLCEKILCKPPGEIPNGK 648
+ Q+ C+ GF Y ET+ C SG W+ P P C +I C PP IPNG
Sbjct: 224 KEIYKANERVQYKCSAGFEYSERGETI-CTASG----WA-PVPSCVEITCDPP-HIPNGF 276
Query: 649 YTNSHKDVFEYNEVVTYSCLSSTGPDEFSLVGESSLFCIGKDEWSSDP 792
YT + + + +TY C P+ V C G + WS P
Sbjct: 277 YT-PESNRYRTGDRITYHCKEGFYPEIQGNVAR----CTG-NHWSPAP 318
>ref|XP_003122123.1| PREDICTED: sushi, von Willebrand factor type A, EGF and pentraxin
domain-containing protein 1 [Sus scrofa].
Length = 3257
Score = 85.5 bits (210), Expect = 4e-17
Identities = 56/188 (29%), Positives = 80/188 (42%)
Frame = +1
Query: 238 CDEPPKFESMRPQVLNTTYRPGDRVEYECRPGFRPMVPALPTSSVCQDDNTWSPLQEACR 417
C PP + QV + Y VEY C GF + +S +C D +WS C
Sbjct: 2519 CGSPPVLAN--GQVKGSEYTFQKEVEYICNVGF---LLEGASSRLCLADGSWSGTTPMCV 2573
Query: 418 RKACSNLPDPLNGQVSYPNGDTLFGSKAQFTCNTGFYIIGAETVYCQVSGNVMAWSEPSP 597
C+ P NG + D FG + +F C G+ + GA + CQ GN W P
Sbjct: 2574 PVRCAPPPQVANGVMD--GLDYGFGKEVEFRCQEGYMLHGAPKLTCQSDGN---WDAQFP 2628
Query: 598 LCEKILCKPPGEIPNGKYTNSHKDVFEYNEVVTYSCLSSTGPDEFSLVGESSLFCIGKDE 777
LC+ + C PP ++P+G + N F + + Y C + L G S C+ +
Sbjct: 2629 LCKPVSCGPPEDLPHG-FPNGFS--FYHGGHIQYQCFPG-----YKLHGSPSRRCLSNNS 2680
Query: 778 WSSDPPEC 801
WS PP C
Sbjct: 2681 WSGSPPSC 2688
Score = 80.5 bits (197), Expect = 1e-15
Identities = 55/170 (32%), Positives = 72/170 (42%)
Frame = +1
Query: 292 YRPGDRVEYECRPGFRPMVPALPTSSVCQDDNTWSPLQEACRRKACSNLPDPLNGQVSYP 471
Y G V + C G + M A T C + WS C +C P NG +
Sbjct: 1491 YTVGAEVTFSCEDGHQLMGVAKIT---CLESGEWSHEIPNCEAISCGAPAVPENGGID-- 1545
Query: 472 NGDTLFGSKAQFTCNTGFYIIGAETVYCQVSGNVMAWSEPSPLCEKILCKPPGEIPNGKY 651
+GSK + CN G+ + G + C SG+ WS P+CE + C P +I +GKY
Sbjct: 1546 GSAFTYGSKVTYRCNKGYTLEGEKESSCLASGS---WSHSPPVCELVKCSSPEDISHGKY 1602
Query: 652 TNSHKDVFEYNEVVTYSCLSSTGPDEFSLVGESSLFCIGKDEWSSDPPEC 801
S Y VTYSC TG +SL G S + C W PP C
Sbjct: 1603 LLSG---LTYLSTVTYSC--ETG---YSLQGPSVVECSASGSWDRAPPTC 1644
Score = 74.7 bits (182), Expect = 8e-14
Identities = 51/168 (30%), Positives = 74/168 (44%)
Frame = +1
Query: 301 GDRVEYECRPGFRPMVPALPTSSVCQDDNTWSPLQEACRRKACSNLPDPLNGQVSYPNGD 480
G ++Y+C PG++ + P S C +N+WS +C CS P NG ++ D
Sbjct: 2654 GGHIQYQCFPGYK--LHGSP-SRRCLSNNSWSGSPPSCLPCRCST-PVIQNGAIN--GTD 2707
Query: 481 TLFGSKAQFTCNTGFYIIGAETVYCQVSGNVMAWSEPSPLCEKILCKPPGEIPNGKYTNS 660
G A+ C GF ++G + C+ +G WS P CE C P IPN + S
Sbjct: 2708 FGCGKAARIRCFKGFQLLGLSEITCEANGQ---WSTSFPSCEHTFCGSPPVIPNAFVSES 2764
Query: 661 HKDVFEYNEVVTYSCLSSTGPDEFSLVGESSLFCIGKDEWSSDPPECK 804
V+TY+C S + + G S L C K WS P C+
Sbjct: 2765 GS---LQENVITYNCRSG-----YVMQGSSDLTCTEKGTWSQPYPVCE 2804
Score = 74.7 bits (182), Expect = 8e-14
Identities = 50/189 (26%), Positives = 81/189 (42%)
Frame = +1
Query: 238 CDEPPKFESMRPQVLNTTYRPGDRVEYECRPGFRPMVPALPTSSVCQDDNTWSPLQEACR 417
C+ PP+ + + +V N+T G V Y C G+ + +P +S C ++ TWS C+
Sbjct: 2985 CEAPPELLNGKAEVENST--AGLSVVYSCNRGYS--LEGVPEAS-CTENETWSHPVPLCK 3039
Query: 418 RKACSNLPDPLNGQVSYPNGDTLFGSKAQFTCNTGFYIIGAETVYCQVSGNVMAWSEPSP 597
C +P + + C GF + G + C+ W++ S
Sbjct: 3040 PNPCP-VPFVIPENALLSEKEFYVDQNVSIKCREGFLLQGQSIITCRPDET---WTQTSA 3095
Query: 598 LCEKILCKPPGEIPNGKYTNSHKDVFEYNEVVTYSCLSSTGPDEFSLVGESSLFCIGKDE 777
CEKI C PP + N H ++Y +++TYSC S + L G C+
Sbjct: 3096 KCEKISCGPPTHVENAIARGVH---YQYGDMITYSCYSG-----YMLEGSLRSVCLENGT 3147
Query: 778 WSSDPPECK 804
W+S PP C+
Sbjct: 3148 WTS-PPVCR 3155
Score = 73.6 bits (179), Expect = 2e-13
Identities = 55/195 (28%), Positives = 77/195 (39%), Gaps = 1/195 (0%)
Frame = +1
Query: 238 CDEPPKFESMRPQVLNTTYRPGDRVEYECRPGFRPMVPALPTSSVCQDDNTWSPLQEACR 417
C EPP E+ VL V + C+ G P++ C W+ C+
Sbjct: 2009 CPEPPLLENQL--VLKELTTDVGVVTFSCKEGHALQGPSVLK---CLPSQQWNDSFPVCK 2063
Query: 418 RKACSNLPDPL-NGQVSYPNGDTLFGSKAQFTCNTGFYIIGAETVYCQVSGNVMAWSEPS 594
C LP PL + V P+ FGS +++C GF++ G T +CQ G WS P
Sbjct: 2064 MVLC--LPPPLISFGVPAPSSALHFGSTVKYSCVDGFFLRGDPTTFCQADG---TWSSPL 2118
Query: 595 PLCEKILCKPPGEIPNGKYTNSHKDVFEYNEVVTYSCLSSTGPDEFSLVGESSLFCIGKD 774
P C + C P EI NG + + + S T F LVG ++ C
Sbjct: 2119 PECVPVECPHPEEILNG--------IIDVQGLAYLSTALYTCKPGFELVGNTTTLCGEDG 2170
Query: 775 EWSSDPPECKGSQMS 819
W P CK + S
Sbjct: 2171 HWLGKKPTCKPIECS 2185
Score = 73.6 bits (179), Expect = 2e-13
Identities = 46/162 (28%), Positives = 72/162 (44%)
Frame = +1
Query: 316 YECRPGFRPMVPALPTSSVCQDDNTWSPLQEACRRKACSNLPDPLNGQVSYPNGDTLFGS 495
Y C+PGF + T+++C +D W + C+ CS + NG+ SY N +G
Sbjct: 2150 YTCKPGFELVGN---TTTLCGEDGHWLGKKPTCKPIECSKPKEISNGKFSYTN--LHYGQ 2204
Query: 496 KAQFTCNTGFYIIGAETVYCQVSGNVMAWSEPSPLCEKILCKPPGEIPNGKYTNSHKDVF 675
++C+ GF + G + + C +G+ W P C I C PP I NG + +
Sbjct: 2205 TITYSCDRGFRLEGPKALTCLETGD---WDVDVPSCSAIHCDPPQPIENGFVEGAD---Y 2258
Query: 676 EYNEVVTYSCLSSTGPDEFSLVGESSLFCIGKDEWSSDPPEC 801
Y ++ YSC F + G + C + WSS P C
Sbjct: 2259 SYGAMIIYSCFPG-----FQVAGHAMQTC-EESGWSSSIPTC 2294
Score = 72.8 bits (177), Expect = 3e-13
Identities = 47/165 (28%), Positives = 72/165 (43%), Gaps = 1/165 (0%)
Frame = +1
Query: 310 VEYECRPGFRPMV-PALPTSSVCQDDNTWSPLQEACRRKACSNLPDPLNGQVSYPNGDTL 486
V Y C PG+ + P L +CQ+D TW+ +C C+ P +G + + +T
Sbjct: 2367 VLYTCHPGYELLGNPVL----ICQEDGTWNGSAPSCISIECNLPAAPEHGSLHFT--ETT 2420
Query: 487 FGSKAQFTCNTGFYIIGAETVYCQVSGNVMAWSEPSPLCEKILCKPPGEIPNGKYTNSHK 666
GS Q++C G+ ++G++ C + WS SP CE I C+ P I NG S+
Sbjct: 2421 MGSAVQYSCKLGYTLVGSDLRLCLQNRE---WSGTSPHCEAISCQKPNPILNGSIKGSN- 2476
Query: 667 DVFEYNEVVTYSCLSSTGPDEFSLVGESSLFCIGKDEWSSDPPEC 801
+ Y V+ Y C + L G C + W P C
Sbjct: 2477 --YTYLSVLYYECNPG-----YVLNGTERRTCQENENWDGKEPVC 2514
Score = 72.8 bits (177), Expect = 3e-13
Identities = 44/163 (26%), Positives = 68/163 (41%)
Frame = +1
Query: 316 YECRPGFRPMVPALPTSSVCQDDNTWSPLQEACRRKACSNLPDPLNGQVSYPNGDTLFGS 495
YEC PG+ V CQ++ W + C C + P NGQV + F
Sbjct: 2485 YECNPGY---VLNGTERRTCQENENWDGKEPVCIPVDCGSPPVLANGQVK--GSEYTFQK 2539
Query: 496 KAQFTCNTGFYIIGAETVYCQVSGNVMAWSEPSPLCEKILCKPPGEIPNGKYTNSHKDVF 675
+ ++ CN GF + GA + C G+ WS +P+C + C PP ++ NG +
Sbjct: 2540 EVEYICNVGFLLEGASSRLCLADGS---WSGTTPMCVPVRCAPPPQVANGVMDGLD---Y 2593
Query: 676 EYNEVVTYSCLSSTGPDEFSLVGESSLFCIGKDEWSSDPPECK 804
+ + V + C + + L G L C W + P CK
Sbjct: 2594 GFGKEVEFRC-----QEGYMLHGAPKLTCQSDGNWDAQFPLCK 2631
Score = 72.0 bits (175), Expect = 5e-13
Identities = 53/191 (27%), Positives = 75/191 (39%), Gaps = 5/191 (2%)
Frame = +1
Query: 238 CDEPPKFE-SMRPQVLNTTYRPGDRVEYECRPGFRPMVPALPTSSV--CQDDNTW--SPL 402
C++PP + + + G V ++C GF L TS+ C W SP+
Sbjct: 1769 CEKPPTVSYGILESLSKAKFAAGSIVSFKCMEGF-----VLNTSAKIECMRGGQWNPSPM 1823
Query: 403 QEACRRKACSNLPDPLNGQVSYPNGDTLFGSKAQFTCNTGFYIIGAETVYCQVSGNVMAW 582
C C P LNG N FG+ ++CN GFYI G + C+ +G W
Sbjct: 1824 SIQCIPVRCGEPPSILNGYAIGSNYS--FGAIVAYSCNRGFYIKGEKKSACEATGQ---W 1878
Query: 583 SEPSPLCEKILCKPPGEIPNGKYTNSHKDVFEYNEVVTYSCLSSTGPDEFSLVGESSLFC 762
S P P C + C P ++ NG ++ FE V Y C + VG C
Sbjct: 1879 SSPIPTCHPVSCSEPPKVENGFLEHTTGRTFE--SEVRYRCNPG-----YKSVGSPVFVC 1931
Query: 763 IGKDEWSSDPP 795
W S+ P
Sbjct: 1932 QANRHWHSESP 1942
Score = 72.0 bits (175), Expect = 5e-13
Identities = 62/195 (31%), Positives = 89/195 (45%), Gaps = 5/195 (2%)
Frame = +1
Query: 235 ACDEPPKFESMRPQVLNTTYRPGD-RVEYECRPGFRPMVPALPTSSVCQDDNTW---SPL 402
+C EPPK E+ + +TT R + V Y C PG++ + + VCQ + W SPL
Sbjct: 1889 SCSEPPKVENGFLE--HTTGRTFESEVRYRCNPGYKSVGSPV---FVCQANRHWHSESPL 1943
Query: 403 QEACRRKACSNLPDPLNGQVSYPNGDTLFGSKAQFTCNTGFYIIGAETVYCQVSGNVMAW 582
+C C P NG + N + GSK QF CN G+ +IG + C SG W
Sbjct: 1944 --SCIPLNCGKPPPIQNGYMKGENFEV--GSKVQFFCNEGYELIGDHSWTCLKSGK---W 1996
Query: 583 S-EPSPLCEKILCKPPGEIPNGKYTNSHKDVFEYNEVVTYSCLSSTGPDEFSLVGESSLF 759
S +P+ C C P + N K++ VVT+SC + +L G S L
Sbjct: 1997 SKKPNQKCMPTKCPEPPLLENQLVL---KELTTDVGVVTFSC-----KEGHALQGPSVLK 2048
Query: 760 CIGKDEWSSDPPECK 804
C+ +W+ P CK
Sbjct: 2049 CLPSQQWNDSFPVCK 2063
Score = 70.5 bits (171), Expect = 1e-12
Identities = 56/242 (23%), Positives = 87/242 (35%), Gaps = 43/242 (17%)
Frame = +1
Query: 238 CDEPPKFESMRPQVLNTT--YRPGDRVEYECRPGFRPMVPALPTSSVCQDDNTWSPLQEA 411
C + P E P + + +PG ++ C PGF+ + C + W+
Sbjct: 1314 CSDCPPLEESVPHLRTASGDVKPGSKISLFCDPGFQMIG---NPEQYCLNQGQWTQPLPR 1370
Query: 412 CRRKACSNLPDPLNGQVSYPNGDTLFGSKAQFTCNTGFYIIGAETVYCQVSGNVMAWSEP 591
C R +C P NG Y D GS + CN G+Y++G ++C +G +W+
Sbjct: 1371 CERISCGVPPPLENG--FYSAEDFHAGSTVTYQCNHGYYLLGDSRMFCTDNG---SWNGI 1425
Query: 592 SPLC-----------------------------------------EKILCKPPGEIPNGK 648
SP C E I CK PG NG
Sbjct: 1426 SPSCLDVDECAVGSDCSEHASCLNTNGSYICSCTPPYTGDGKNCAEPIKCKAPGNPENG- 1484
Query: 649 YTNSHKDVFEYNEVVTYSCLSSTGPDEFSLVGESSLFCIGKDEWSSDPPECKGSQMSISS 828
+S ++ VT+SC D L+G + + C+ EWS + P C+ +
Sbjct: 1485 --HSSGQIYTVGAEVTFSC-----EDGHQLMGVAKITCLESGEWSHEIPNCEAISCGAPA 1537
Query: 829 TP 834
P
Sbjct: 1538 VP 1539
Score = 64.3 bits (155), Expect = 1e-10
Identities = 46/148 (31%), Positives = 61/148 (41%), Gaps = 2/148 (1%)
Frame = +1
Query: 367 SVCQDDNTWSPL--QEACRRKACSNLPDPLNGQVSYPNGDTLFGSKAQFTCNTGFYIIGA 540
S CQ D TW PL E+C +C P +G V + F S + C TG+ + G+
Sbjct: 2905 STCQLDGTWEPLFSDESCSPVSCGKPESPEHGFVF--GSEYSFESTIVYHCETGYELEGS 2962
Query: 541 ETVYCQVSGNVMAWSEPSPLCEKILCKPPGEIPNGKYTNSHKDVFEYNEVVTYSCLSSTG 720
CQ +G WS C+K C+ P E+ NGK + V YSC
Sbjct: 2963 RERVCQENGQ---WSGGVATCKKTRCEAPPELLNGKAEVENSTA---GLSVVYSCNRG-- 3014
Query: 721 PDEFSLVGESSLFCIGKDEWSSDPPECK 804
+SL G C + WS P CK
Sbjct: 3015 ---YSLEGVPEASCTENETWSHPVPLCK 3039
Score = 63.2 bits (152), Expect = 2e-10
Identities = 43/176 (24%), Positives = 70/176 (39%)
Frame = +1
Query: 277 VLNTTYRPGDRVEYECRPGFRPMVPALPTSSVCQDDNTWSPLQEACRRKACSNLPDPLNG 456
V + Y + Y C G+ VCQ++ WS C++ C P+ LNG
Sbjct: 2938 VFGSEYSFESTIVYHCETGYELEGSR---ERVCQENGQWSGGVATCKKTRCEAPPELLNG 2994
Query: 457 QVSYPNGDTLFGSKAQFTCNTGFYIIGAETVYCQVSGNVMAWSEPSPLCEKILCKPPGEI 636
+ N G ++CN G+ + G C + WS P PLC+ C P I
Sbjct: 2995 KAEVENSTA--GLSVVYSCNRGYSLEGVPEASCTEN---ETWSHPVPLCKPNPCPVPFVI 3049
Query: 637 PNGKYTNSHKDVFEYNEVVTYSCLSSTGPDEFSLVGESSLFCIGKDEWSSDPPECK 804
P + + F ++ V+ C + F L G+S + C + W+ +C+
Sbjct: 3050 PENALLSEKE--FYVDQNVSIKC-----REGFLLQGQSIITCRPDETWTQTSAKCE 3098
Score = 62.0 bits (149), Expect = 5e-10
Identities = 55/229 (24%), Positives = 79/229 (34%), Gaps = 39/229 (17%)
Frame = +1
Query: 235 ACDEPPKFESMRPQVLNTTYRPGDRVEYECRPGFRPMVPALPTSSVCQDDNTWSPLQEAC 414
+C PP E+ + + G V Y+C G+ + + C D+ +W+ + +C
Sbjct: 1375 SCGVPPPLENGFYSAED--FHAGSTVTYQCNHGYYLLGDS---RMFCTDNGSWNGISPSC 1429
Query: 415 RR-------KACSNLPDPLNGQVSY---------------------------PNGDT--- 483
CS LN SY NG +
Sbjct: 1430 LDVDECAVGSDCSEHASCLNTNGSYICSCTPPYTGDGKNCAEPIKCKAPGNPENGHSSGQ 1489
Query: 484 --LFGSKAQFTCNTGFYIIGAETVYCQVSGNVMAWSEPSPLCEKILCKPPGEIPNGKYTN 657
G++ F+C G ++G + C SG WS P CE I C P NG
Sbjct: 1490 IYTVGAEVTFSCEDGHQLMGVAKITCLESGE---WSHEIPNCEAISCGAPAVPENGGIDG 1546
Query: 658 SHKDVFEYNEVVTYSCLSSTGPDEFSLVGESSLFCIGKDEWSSDPPECK 804
S F Y VTY C ++L GE C+ WS PP C+
Sbjct: 1547 S---AFTYGSKVTYRCNKG-----YTLEGEKESSCLASGSWSHSPPVCE 1587
Score = 61.6 bits (148), Expect = 7e-10
Identities = 44/187 (23%), Positives = 70/187 (37%)
Frame = +1
Query: 238 CDEPPKFESMRPQVLNTTYRPGDRVEYECRPGFRPMVPALPTSSVCQDDNTWSPLQEACR 417
C P + + TY V Y C G+ P++ C +W C
Sbjct: 1591 CSSPEDISHGKYLLSGLTYL--STVTYSCETGYSLQGPSVVE---CSASGSWDRAPPTCG 1645
Query: 418 RKACSNLPDPLNGQVSYPNGDTLFGSKAQFTCNTGFYIIGAETVYCQVSGNVMAWSEPSP 597
C P + ++ N FG+ +TC G+ + G +T+ C SG WSE
Sbjct: 1646 LVFCGEPPTIKDAVITGSNFS--FGNTVTYTCKEGYTLAGPDTIECLASGK---WSESDQ 1700
Query: 598 LCEKILCKPPGEIPNGKYTNSHKDVFEYNEVVTYSCLSSTGPDEFSLVGESSLFCIGKDE 777
C + C P + + +H+ + ++ Y C D +SL S L C + +
Sbjct: 1701 QCLAVSCDEPPVVEHASPETAHR---LFGDIAFYYC-----SDGYSLADNSQLLCNAQGQ 1752
Query: 778 WSSDPPE 798
W PPE
Sbjct: 1753 WV--PPE 1757
Score = 60.1 bits (144), Expect = 2e-09
Identities = 58/226 (25%), Positives = 83/226 (36%), Gaps = 8/226 (3%)
Frame = +1
Query: 235 ACDEPPKFESMRPQVLNTTYRPGDRVEYECRPGFRPMVPALPTSSVCQDDNTWSPLQEA- 411
+CDEPP E P+ + + GD Y C G+ A + +C W P +
Sbjct: 1706 SCDEPPVVEHASPETAHRLF--GDIAFYYCSDGYSL---ADNSQLLCNAQGQWVPPEGQT 1760
Query: 412 ---CRRKACSNLPDPLNGQV-SYPNGDTLFGSKAQFTCNTGFYIIGAETVYCQVSGNVMA 579
C C P G + S GS F C GF + + + C G
Sbjct: 1761 MPHCIAHFCEKPPTVSYGILESLSKAKFAAGSIVSFKCMEGFVLNTSAKIECMRGGQ--- 1817
Query: 580 WSEPSPL---CEKILCKPPGEIPNGKYTNSHKDVFEYNEVVTYSCLSSTGPDEFSLVGES 750
W+ PSP+ C + C P I NG S+ + + +V YSC F + GE
Sbjct: 1818 WN-PSPMSIQCIPVRCGEPPSILNGYAIGSN---YSFGAIVAYSCNRG-----FYIKGEK 1868
Query: 751 SLFCIGKDEWSSDPPECKGSQMSISSTPHL*LLVSTLDKNFTTKVK 888
C +WSS P C S L T + F ++V+
Sbjct: 1869 KSACEATGQWSSPIPTCHPVSCSEPPKVENGFLEHTTGRTFESEVR 1914
Score = 55.8 bits (133), Expect = 4e-08
Identities = 45/177 (25%), Positives = 69/177 (38%), Gaps = 5/177 (2%)
Frame = +1
Query: 286 TTYRPGDRVEYECRPGFRPMVPALPTSSV-CQDDNTWSPLQEACRRKACSNLPDPLNGQV 462
T + G C GF+ L S + C+ + WS +C C + P N V
Sbjct: 2706 TDFGCGKAARIRCFKGFQ----LLGLSEITCEANGQWSTSFPSCEHTFCGSPPVIPNAFV 2761
Query: 463 SYPNGDTLFGSKAQFTCNTGFYIIGAETVYCQVSGNVMAWSEPSPLCEKILCKPPGEIPN 642
S +L + + C +G+ + G+ + C G WS+P P+CE + C PP +PN
Sbjct: 2762 S--ESGSLQENVITYNCRSGYVMQGSSDLTCTEKGT---WSQPYPVCEPLSCGPPPSVPN 2816
Query: 643 GKYTNSHKDVFEYNEVVTYSCLS----STGPDEFSLVGESSLFCIGKDEWSSDPPEC 801
T + Y V CL T D F+ + F + S P +C
Sbjct: 2817 AVATG---EAHTYESKVRLRCLEGYMMDTDIDTFTCQKDGHWF---PERISCSPKKC 2867
Score = 53.5 bits (127), Expect = 2e-07
Identities = 32/118 (27%), Positives = 53/118 (44%), Gaps = 4/118 (3%)
Frame = +1
Query: 322 CRPGFRPMVPALPTSSVCQDDNTWSPLQEACRRKACSNLPDPLNGQVSYPNGDTLFGSKA 501
C PGF + ++ +C + WS + +CR + C L P +G +S G+ + +
Sbjct: 93 CHPGFDLVGSSI---FLCLPNGLWSGSESSCRVRTCPRLRQPKHGHLSCSMGEMSYRTVC 149
Query: 502 QFTCNTGFYIIGAETVYCQVSGNVMAWSEPSPLCEKILC----KPPGEIPNGKYTNSH 663
TC+ G+ + G+ + CQV+G W P C + C KP G I + H
Sbjct: 150 LVTCDEGYRLEGSAKLTCQVNGQ---WDGLEPRCVERHCSTFQKPKGVIVSPPSCGKH 204
Score = 52.4 bits (124), Expect = 4e-07
Identities = 31/117 (26%), Positives = 49/117 (41%)
Frame = +1
Query: 454 GQVSYPNGDTLFGSKAQFTCNTGFYIIGAETVYCQVSGNVMAWSEPSPLCEKILCKPPGE 633
G V+ + L+ + +TC+ G+ ++G + CQ G W+ +P C I C P
Sbjct: 2352 GSVATHSAKFLYNTMVLYTCHPGYELLGNPVLICQEDG---TWNGSAPSCISIECNLPAA 2408
Query: 634 IPNGKYTNSHKDVFEYNEVVTYSCLSSTGPDEFSLVGESSLFCIGKDEWSSDPPECK 804
+G + H V YSC ++LVG C+ EWS P C+
Sbjct: 2409 PEHG---SLHFTETTMGSAVQYSCKLG-----YTLVGSDLRLCLQNREWSGTSPHCE 2457
>ref|NP_998980.1| complement decay-accelerating factor [Sus scrofa].
Length = 498
Score = 84.0 bits (206), Expect = 1e-16
Identities = 46/129 (35%), Positives = 68/129 (52%), Gaps = 3/129 (2%)
Frame = +1
Query: 235 ACDEPPK--FESMRPQVLNTTYRP-GDRVEYECRPGFRPMVPALPTSSVCQDDNTWSPLQ 405
+CD P + F S++ Y P G VEYECR G++ + L C + TWS
Sbjct: 99 SCDVPTRLHFASLKKSYSKQNYFPEGFTVEYECRKGYKRDL-TLSEKLTCLQNFTWSKPD 157
Query: 406 EACRRKACSNLPDPLNGQVSYPNGDTLFGSKAQFTCNTGFYIIGAETVYCQVSGNVMAWS 585
E C++K C + NG V+ D LFG+ F+CN G+ ++GA + YC N + WS
Sbjct: 158 EFCKKKQCPTPGELKNGHVNITT-DLLFGASIFFSCNAGYRLVGATSSYCFAIANDVEWS 216
Query: 586 EPSPLCEKI 612
+P P C++I
Sbjct: 217 DPLPDCQEI 225
Score = 72.4 bits (176), Expect = 4e-13
Identities = 59/225 (26%), Positives = 99/225 (44%), Gaps = 13/225 (5%)
Frame = +1
Query: 199 LALVFLLPMPSDACDEPPKFESMRPQVLNTTYRPGDR-VEYECRPGFRPMVPALPTSSVC 375
L L+ +P C PP + +P + P + Y+C GF VP + S +C
Sbjct: 26 LLLLLCIPAAQGDCSLPPDVPNAQPDLRGLASFPEQTTITYKCNKGF-VKVPGMADSVLC 84
Query: 376 QDDNTWSPLQEACRRKA-------CSNLPDPLNGQVSYPNGDTLFGSKAQFTCNTGFY-- 528
+D WS + E C R ++L + Q +P G T+ ++ C G+
Sbjct: 85 LNDK-WSEVAEFCNRSCDVPTRLHFASLKKSYSKQNYFPEGFTV-----EYECRKGYKRD 138
Query: 529 IIGAETVYCQVSGNVMAWSEPSPLCEKILCKPPGEIPNGKYTNSHKDVFEYNEVVTYSCL 708
+ +E + C + WS+P C+K C PGE+ NG + N D+ + + +SC
Sbjct: 139 LTLSEKLTCLQN---FTWSKPDEFCKKKQCPTPGELKNG-HVNITTDLL-FGASIFFSCN 193
Query: 709 SSTGPDEFSLVGESSLFC--IGKD-EWSSDPPECKGSQMSISSTP 834
+ + LVG +S +C I D EWS P+C+ ++ + P
Sbjct: 194 AG-----YRLVGATSSYCFAIANDVEWSDPLPDCQEISPTVKAIP 233
Database: RefSeq49_SP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 11,343,932
Number of sequences in database: 24,897
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 24897
Number of Hits to DB: 28,316,497
Number of extensions: 804434
Number of successful extensions: 2589
Number of sequences better than 1.0e-05: 28
Number of HSP's gapped: 2357
Number of HSP's successfully gapped: 107
Length of query: 350
Length of database: 11,343,932
Length adjustment: 100
Effective length of query: 250
Effective length of database: 8,854,232
Effective search space: 2213558000
Effective search space used: 2213558000
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)
Search to RefSeqMP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-014101
(1051 letters)
Database: RefSeq49_MP.fasta
30,036 sequences; 15,617,559 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_034908.1| membrane cofactor protein precursor [Mus muscul... 177 1e-44
Alignment gi|NP_034146.2| complement decay-accelerating factor, GPI-ancho... 150 2e-36
Alignment gi|NP_031853.2| complement decay-accelerating factor transmembr... 146 2e-35
Alignment gi|NP_038527.2| complement regulatory protein Crry [Mus musculu... 136 3e-32
Alignment gi|NP_033607.2| zona pellucida sperm-binding protein 3 receptor... 110 2e-24
Alignment gi|NP_031602.3| C4b-binding protein precursor [Mus musculus]. 110 2e-24
Alignment gi|NP_001074860.2| CUB and sushi domain-containing protein 3 [M... 89 4e-18
Alignment gi|NP_073725.2| sushi, von Willebrand factor type A, EGF and pe... 86 5e-17
Alignment gi|NP_031784.1| complement receptor type 2 [Mus musculus]. 84 1e-16
Alignment gi|NP_444401.2| CUB and sushi domain-containing protein 1 precu... 80 3e-15
>ref|NP_034908.1| membrane cofactor protein precursor [Mus musculus].
Length = 365
Score = 177 bits (449), Expect = 1e-44
Identities = 94/234 (40%), Positives = 142/234 (60%), Gaps = 10/234 (4%)
Frame = +1
Query: 133 ALPCRPEN--PFSSRCFVEILWVSL-----ALVFLLPMPSDACDEPPKFESMRPQ-VLNT 288
A P P++ P R W SL AL+FLL SDAC+ P FE+M +
Sbjct: 3 AAPLMPDSTHPCRRRKSYTFFWCSLGVYAEALLFLLSHLSDACELPRPFEAMELKGTPKL 62
Query: 289 TYRPGDRVEYECRPGFRPMVPALPTSSVCQDDNTWSPLQEA-CRRKACSNLPDPLNGQVS 465
Y G+++EY+C+ G+ + P L ++ C+ ++TW P+ +A C + C+ L DP G+V
Sbjct: 63 FYAVGEKIEYKCKKGYLYLSPYLMIAT-CEPNHTWVPISDAGCIKVQCTMLQDPSFGKVY 121
Query: 466 YPNGDTLFGSKAQFTCNTGFYIIGAETVYCQVSGNVMA-WSEPSPLCEKILCKPPGEIPN 642
Y +G +G++A+FTC G+Y++G ++C + G+ A W+ P CEKI C PP +I N
Sbjct: 122 YIDGSFSWGARAKFTCMEGYYVVGMSVLHCVLKGDDEAYWNGYPPHCEKIYCLPPPKIKN 181
Query: 643 GKYTNSHKDVFEYNEVVTYSCLSSTGPDEFSLVGESSLFCIGKDEWSSDPPECK 804
G +T + +VF+Y+E V+YSC + GPD+FSLVG S +FC G + WS+ PPECK
Sbjct: 182 GTHTLTDINVFKYHEAVSYSCDPTPGPDKFSLVGTSMIFCAGHNTWSNSPPECK 235
Score = 52.8 bits (125), Expect = 5e-07
Identities = 39/186 (20%), Positives = 74/186 (39%), Gaps = 8/186 (4%)
Frame = +1
Query: 301 GDRVEYECRPGFRPMVPALPTSSVCQDDNT-WSPLQEACRRKACSNLPDPLNGQVSYPNG 477
G R ++ C G+ + ++ + DD W+ C + C P NG + +
Sbjct: 130 GARAKFTCMEGYYVVGMSVLHCVLKGDDEAYWNGYPPHCEKIYCLPPPKIKNGTHTLTDI 189
Query: 478 DTL-FGSKAQFTCNTG-----FYIIGAETVYCQVSGNVMAWSEPSPLCEKILCKPPGEIP 639
+ + ++C+ F ++G ++C WS P C+ + C P +
Sbjct: 190 NVFKYHEAVSYSCDPTPGPDKFSLVGTSMIFCAGHNT---WSNSPPECKVVKCPNP-VLQ 245
Query: 640 NGKYTNSHKDVFEYNEVVTYSCLSSTGPDEFSLVGESSLFCIGKDEWSSDPPEC-KGSQM 816
NG+ + ++F Y V + CL F + G S + C + W P+C KG +
Sbjct: 246 NGRLISGAGEIFSYQSTVMFECLQG-----FYMEGSSMVICSANNSWEPSIPKCLKGPRP 300
Query: 817 SISSTP 834
+ + P
Sbjct: 301 THPTKP 306
>ref|NP_034146.2| complement decay-accelerating factor, GPI-anchored precursor [Mus
musculus].
Length = 390
Score = 150 bits (379), Expect = 2e-36
Identities = 78/196 (39%), Positives = 114/196 (58%), Gaps = 7/196 (3%)
Frame = +1
Query: 235 ACDEPPK--FESMRPQVLNTTYRP-GDRVEYECRPGFRPMVPALPTSSVCQDDNTWSPLQ 405
+C P + F S++ + LN + P G VEYECRPGFR P LP + C +D WSP+
Sbjct: 97 SCVAPERLSFASLKKEYLNMNFFPVGTIVEYECRPGFRKQ-PPLPGKATCLEDLVWSPVA 155
Query: 406 EACRRKACSNLPDPLNGQVSYPNGDTLFGSKAQFTCNTGFYIIGAETVYCQVSGNVMAWS 585
+ C++K+C N D NG ++ P G LFGS+ F+CN G+ ++G + +C V+GN + W
Sbjct: 156 QFCKKKSCPNPKDLDNGHINIPTG-ILFGSEINFSCNPGYRLVGVSSTFCSVTGNTVDWD 214
Query: 586 EPSPLCEKILCKPPGEIPNGKYTNSHKDVFEYNEVVTYSCLSSTGPDEFSLVGESSLFC- 762
+ P+C +I C P +I NG D + Y++VVTYSC F LVG +S++C
Sbjct: 215 DEFPVCTEIHCPEPPKINNG-IMRGESDSYTYSQVVTYSC-----DKGFILVGNASIYCT 268
Query: 763 IGKD---EWSSDPPEC 801
+ K +WSS PP C
Sbjct: 269 VSKSDVGQWSSPPPRC 284
>ref|NP_031853.2| complement decay-accelerating factor transmembrane isoform [Mus
musculus].
Length = 400
Score = 146 bits (369), Expect = 2e-35
Identities = 75/196 (38%), Positives = 113/196 (57%), Gaps = 7/196 (3%)
Frame = +1
Query: 235 ACDEPPK--FESMRPQVLNTTYRP-GDRVEYECRPGFRPMVPALPTSSVCQDDNTWSPLQ 405
+CD P + F S++ + N + P G VEYECRPGFR P+L S C +D WSP+
Sbjct: 95 SCDTPERLSFASLKKEYFNMNFFPVGTIVEYECRPGFRKQ-PSLSGKSTCLEDLVWSPVA 153
Query: 406 EACRRKACSNLPDPLNGQVSYPNGDTLFGSKAQFTCNTGFYIIGAETVYCQVSGNVMAWS 585
+ C++K+C N D NG ++ P G LFGS+ F+CN G+ ++G ++ C + GN + W
Sbjct: 154 QFCKKKSCPNPKDLDNGHINIPTG-ILFGSEINFSCNPGYRLVGITSILCTIIGNTVDWD 212
Query: 586 EPSPLCEKILCKPPGEIPNGKYTNSHKDVFEYNEVVTYSCLSSTGPDEFSLVGESSLFC- 762
+ P+C +I C P +I NG D ++Y++VV YSC F L G S+++C
Sbjct: 213 DEFPVCTEIFCPDPPKINNG-IMRGESDSYKYSQVVIYSC-----DKGFILFGNSTIYCT 266
Query: 763 IGKD---EWSSDPPEC 801
+ K +WSS PP+C
Sbjct: 267 VSKSDVGQWSSPPPQC 282
>ref|NP_038527.2| complement regulatory protein Crry [Mus musculus].
Length = 440
Score = 136 bits (342), Expect = 3e-32
Identities = 75/210 (35%), Positives = 109/210 (51%), Gaps = 7/210 (3%)
Frame = +1
Query: 193 VSLALVFLLPMPSDACDEPPKFESMRPQVLN--TTYRPGDRVEYECRPGFRPMVPALPTS 366
+ + L+FLLP C P + S +P L + + G + YEC PG+ S
Sbjct: 27 LEVLLLFLLPFTLGHCPAPSQLPSAKPINLTDESMFPIGTYLLYECLPGYIKR----QFS 82
Query: 367 SVCQDDNTWSPLQEACRRKACSNLPDPLNGQVSYPNGDTLFGSKAQFTCNTGFYIIGAET 546
C+ D+TW+ ++ C RK C DP NG V G FGS+ +TCN G+ +IG+ +
Sbjct: 83 ITCKQDSTWTSAEDKCIRKQCKTPSDPENGLVHVHTG-IQFGSRINYTCNQGYRLIGSSS 141
Query: 547 VYCQVSGNVMAWSEPSPLCEKILCKPPGEIPNGKYTNSHKDVFEYNEVVTYSC-LSSTGP 723
C ++ + W +P+CE I C+ P IPNG + +S ++ F Y VVTY C + G
Sbjct: 142 AVCVITDQSVDWDTEAPICEWIPCEIPPGIPNGDFFSSTREDFHYGMVVTYRCNTDARGK 201
Query: 724 DEFSLVGESSLFCIGKD----EWSSDPPEC 801
F+LVGE SL+C D WS PP+C
Sbjct: 202 ALFNLVGEPSLYCTSNDGEIGVWSGPPPQC 231
Score = 49.3 bits (116), Expect = 5e-06
Identities = 40/160 (25%), Positives = 64/160 (40%), Gaps = 3/160 (1%)
Frame = +1
Query: 349 PALPTSSVCQDDNTWSPLQEACRRKACSNLPDPLNGQVSYPNGDTLFGSK--AQFTCNTG 522
P+L +S + WS C P + V +LF + +F C+ G
Sbjct: 210 PSLYCTSNDGEIGVWSGPPPQCIELNKCTPPPYVENAVMLSENRSLFSLRDIVEFRCHPG 269
Query: 523 FYIIGAETVYCQVSGNVMAWSEPSPLCEK-ILCKPPGEIPNGKYTNSHKDVFEYNEVVTY 699
F + GA +V+CQ ++ W P C K ++C+ P E+ + K + Y E VT
Sbjct: 270 FIMKGASSVHCQ---SLNKWEPELPSCFKGVICRLPQEMSGFQKGLGMKKEYYYGENVTL 326
Query: 700 SCLSSTGPDEFSLVGESSLFCIGKDEWSSDPPECKGSQMS 819
C D ++L G S C W+ +C +S
Sbjct: 327 EC-----EDGYTLEGSSQSQCQSDGSWNPLLAKCVSRSIS 361
>ref|NP_033607.2| zona pellucida sperm-binding protein 3 receptor precursor [Mus
musculus].
Length = 579
Score = 110 bits (274), Expect = 2e-24
Identities = 68/211 (32%), Positives = 108/211 (51%), Gaps = 7/211 (3%)
Frame = +1
Query: 193 VSLALVFLLPMPSDACDEPP--KFESMRPQVL-NTTYRPGDRVEYECRPGFRPMVPALPT 363
++LA V + P+ D C PP F S Q+ +TT+ G ++Y C GF+ + +
Sbjct: 20 MTLATVLMAPVLGD-CGPPPLLPFASPTNQLYESTTFPSGTVLKYTCHHGFK----RVNS 74
Query: 364 SSVCQDDNTWSPLQEACRRKACSNLPDPLNGQVSYPNGDTLFGSKAQFTCNTGFYIIGAE 543
S + D+N C RK C N + +NG+V P+ D L GS +F+C+ G+ +IG+
Sbjct: 75 SHLSCDENGSWVYSTFCARKRCKNPGELVNGKVEIPS-DLLVGSIIEFSCSKGYLLIGSA 133
Query: 544 TVYCQVSGNVMAWSEPSPLCEKILCKPPGEIPNGKYTNSHKDVFEYNEVVTYSCLSSTGP 723
T C+V G + WS+ P C C+PP I NGK++ D++ + VV Y+C
Sbjct: 134 TSRCEVQGKGVDWSDSLPECVIATCEPPPPISNGKHSGRDDDLYTFGSVVIYNC-----D 188
Query: 724 DEFSLVGESSLFCIGKDE----WSSDPPECK 804
F+L+G +S+ C + W PP C+
Sbjct: 189 PTFTLLGNASIVCTVVNRTVGVWRPHPPACQ 219
Score = 62.0 bits (149), Expect = 7e-10
Identities = 44/170 (25%), Positives = 66/170 (38%), Gaps = 2/170 (1%)
Frame = +1
Query: 301 GDRVEYECRPGFRPMVPALPTSSVCQDDNTWSPLQEACRRKACSNLPDPLNGQVSYPNGD 480
G +E+ C G+ + A V WS C C P NG+ S + D
Sbjct: 116 GSIIEFSCSKGYLLIGSATSRCEVQGKGVDWSDSLPECVIATCEPPPPISNGKHSGRDDD 175
Query: 481 TL-FGSKAQFTCNTGFYIIGAETVYCQV-SGNVMAWSEPSPLCEKILCKPPGEIPNGKYT 654
FGS + C+ F ++G ++ C V + V W P C+KI+C P +I G
Sbjct: 176 LYTFGSVVIYNCDPTFTLLGNASIVCTVVNRTVGVWRPHPPACQKIVCHRP-QILKGYLA 234
Query: 655 NSHKDVFEYNEVVTYSCLSSTGPDEFSLVGESSLFCIGKDEWSSDPPECK 804
+ + Y + + C F L G S + C EW P C+
Sbjct: 235 PGFRQFYAYRDALEIRCKKG-----FILRGSSVIHCEANGEWFPSIPTCE 279
Score = 59.3 bits (142), Expect = 5e-09
Identities = 55/207 (26%), Positives = 85/207 (41%), Gaps = 28/207 (13%)
Frame = +1
Query: 268 RPQVLNTTYRPG--------DRVEYECRPGFRPMVPALPTSSV--CQDDNTWSPLQEACR 417
RPQ+L PG D +E C+ GF L SSV C+ + W P C
Sbjct: 225 RPQILKGYLAPGFRQFYAYRDALEIRCKKGF-----ILRGSSVIHCEANGEWFPSIPTCE 279
Query: 418 RKACSNLPDPLNGQVSYPNGDTL-----------FGSKAQFTCNTGF--YIIGAETVYCQ 558
C+N+PD +SY + + G+K ++ C G+ + +TV CQ
Sbjct: 280 PNGCTNIPD-----ISYASWEGYKFPLRNFEVFEIGAKLKYQCKPGYRASLNDPQTVTCQ 334
Query: 559 VSGNVMAWSEPSPLCEKILCKPPGEIPNGKYTNSHKD-----VFEYNEVVTYSCLSSTGP 723
+ + WS + CE+I C P ++ K + +D ++ Y + V Y C + P
Sbjct: 335 EN---LTWSSTNG-CERICCPTP-DMEKIKIVSERRDFTGTCIYAYGDYVFYICNEGSYP 389
Query: 724 DEFSLVGESSLFCIGKDEWSSDPPECK 804
S G SS C +W P C+
Sbjct: 390 --MSTDGRSS--CQADGKWDPAIPSCQ 412
>ref|NP_031602.3| C4b-binding protein precursor [Mus musculus].
Length = 469
Score = 110 bits (274), Expect = 2e-24
Identities = 72/234 (30%), Positives = 110/234 (47%), Gaps = 18/234 (7%)
Frame = +1
Query: 157 PFSSRC-----------FVEILWVSLALVFLLPMPSDACDEPPKFESMRP--QVLNTTYR 297
PFS+ C F LWV++ C PP + P V T +
Sbjct: 29 PFSTLCRVSGPTLFQMTFTAALWVAVF---------GKCGPPPAIPNALPASDVNRTDFE 79
Query: 298 PGDRVEYECRPGFRPMVPALPTSSVCQDDNTWSPLQEACRRKACSNLPDPLNGQVSYPNG 477
++YEC PG+ + + C+ W + +C +K C N NG Y NG
Sbjct: 80 SHTTLKYECLPGYGRGISRMMV--YCKPSGEWE-ISVSCAKKHCRNPGYLDNG---YVNG 133
Query: 478 DTL-FGSKAQFTCNTGFYIIGAETVYCQVSGNVMAWSEPSPLCEKILCKPPGEIPNGKYT 654
+T+ FGS+ +F+C GF ++G+ T C+V G +AWS P P C + C PP +I NGK++
Sbjct: 134 ETITFGSQIEFSCQEGFILVGSSTSSCEVRGKGVAWSNPFPECVIVKCGPPPDISNGKHS 193
Query: 655 NSHKDVFEYNEVVTYSCLSSTGPDEFSLVGESSLFCIGKDE----WSSDPPECK 804
+ +D + YN ++Y+C F LVG + C ++ WSS PP C+
Sbjct: 194 GT-EDFYPYNHGISYTC-----DPGFRLVGSPFIGCTVVNKTVPVWSSSPPTCE 241
Score = 73.6 bits (179), Expect = 2e-13
Identities = 47/165 (28%), Positives = 73/165 (44%), Gaps = 1/165 (0%)
Frame = +1
Query: 301 GDRVEYECRPGFRPMVPALPTSSVCQDDNTWSPLQEACRRKACSNLPDPLNGQVSYPNGD 480
G ++E+ C+ GF + + + V WS C C PD NG+ S
Sbjct: 139 GSQIEFSCQEGFILVGSSTSSCEVRGKGVAWSNPFPECVIVKCGPPPDISNGKHSGTEDF 198
Query: 481 TLFGSKAQFTCNTGFYIIGAETVYCQV-SGNVMAWSEPSPLCEKILCKPPGEIPNGKYTN 657
+ +TC+ GF ++G+ + C V + V WS P CEKI+C P I +G +
Sbjct: 199 YPYNHGISYTCDPGFRLVGSPFIGCTVVNKTVPVWSSSPPTCEKIICSQP-NILHGVIVS 257
Query: 658 SHKDVFEYNEVVTYSCLSSTGPDEFSLVGESSLFCIGKDEWSSDP 792
+K + + + V +CL+ T L G + C G WSS P
Sbjct: 258 GYKATYTHRDSVRLACLNGT-----VLRGRHVIECQGNGNWSSLP 297
>ref|NP_001074860.2| CUB and sushi domain-containing protein 3 [Mus musculus].
Length = 3707
Score = 89.4 bits (220), Expect = 4e-18
Identities = 58/177 (32%), Positives = 79/177 (44%), Gaps = 1/177 (0%)
Frame = +1
Query: 274 QVLNTTYRPGDRVEYECRPGFRPMVPALPTSSVCQDDNTWSPLQEACRRKACSNLPDPLN 453
QV+ Y D V Y+C PGFR + ++ +CQ D+ WS +C +C + P+
Sbjct: 2827 QVIGENYGYRDTVVYQCNPGFRLIGSSV---RICQQDHNWSGQLPSCVPVSCGHPGSPIY 2883
Query: 454 GQVSYPNGDTLFGSKAQFTCNTGFYIIGAETVYCQVSGNVMAWSEPSPLCEKILCKPPGE 633
G+ S NG F F+CN G+ + G CQ + WS P P+C+ + C PG
Sbjct: 2884 GRTS-GNGFN-FNDVVTFSCNIGYLMQGPTKAQCQAN---RQWSHPPPVCKVVNCSDPGI 2938
Query: 634 IPNGKYTNS-HKDVFEYNEVVTYSCLSSTGPDEFSLVGESSLFCIGKDEWSSDPPEC 801
N K + F Y VV Y C P F L G S L C +W PEC
Sbjct: 2939 PANSKRESKIEHGNFTYGTVVFYDC----NPGYF-LFGSSVLICQPNGQWDKPLPEC 2990
Score = 80.5 bits (197), Expect = 2e-15
Identities = 55/195 (28%), Positives = 85/195 (43%), Gaps = 2/195 (1%)
Frame = +1
Query: 304 DRVEYECRPGFRPMVPALPTSSVCQDDNTWSPLQEACRRKACSNLPDPLNG--QVSYPNG 477
D V + C G+ + PT + CQ + WS C+ CS+ P N + +G
Sbjct: 2895 DVVTFSCNIGY---LMQGPTKAQCQANRQWSHPPPVCKVVNCSDPGIPANSKRESKIEHG 2951
Query: 478 DTLFGSKAQFTCNTGFYIIGAETVYCQVSGNVMAWSEPSPLCEKILCKPPGEIPNGKYTN 657
+ +G+ + CN G+++ G+ + CQ +G W +P P C I C PG PN +
Sbjct: 2952 NFTYGTVVFYDCNPGYFLFGSSVLICQPNGQ---WDKPLPECIMIDCGHPGIPPNAVLSG 3008
Query: 658 SHKDVFEYNEVVTYSCLSSTGPDEFSLVGESSLFCIGKDEWSSDPPECKGSQMSISSTPH 837
+ + + V YSC TG + SL+G++S C WS P C G P
Sbjct: 3009 ---EKYTFGSTVHYSC---TG--KRSLLGQASRTCQLNGHWSGSQPHCSGDTTGTCGDPG 3060
Query: 838 L*LLVSTLDKNFTTK 882
S + +F TK
Sbjct: 3061 TPGHGSRQESDFRTK 3075
Score = 74.3 bits (181), Expect = 1e-13
Identities = 54/172 (31%), Positives = 71/172 (41%), Gaps = 2/172 (1%)
Frame = +1
Query: 292 YRPGDRVEYECRPGFRPMVPALPTSSVCQDDNTWSPLQEA--CRRKACSNLPDPLNGQVS 465
Y +V + C PG+ + PA S C + TWS E C+ +C LP P NG
Sbjct: 2715 YEYKTKVVFSCDPGYHGLGPA---SIECLPNGTWSWRTERPYCQIISCGELPTPPNGNKI 2771
Query: 466 YPNGDTLFGSKAQFTCNTGFYIIGAETVYCQVSGNVMAWSEPSPLCEKILCKPPGEIPNG 645
T +GS A FTC+ GF ++G+ C SG WS C C P I NG
Sbjct: 2772 --GTQTSYGSTAIFTCDLGFMLVGSAVRECLSSG---LWSGSETRCLAGHCGIPELIVNG 2826
Query: 646 KYTNSHKDVFEYNEVVTYSCLSSTGPDEFSLVGESSLFCIGKDEWSSDPPEC 801
+ + + Y + V Y C F L+G S C WS P C
Sbjct: 2827 QVIGEN---YGYRDTVVYQCNPG-----FRLIGSSVRICQQDHNWSGQLPSC 2870
Score = 71.6 bits (174), Expect = 9e-13
Identities = 49/167 (29%), Positives = 67/167 (40%)
Frame = +1
Query: 301 GDRVEYECRPGFRPMVPALPTSSVCQDDNTWSPLQEACRRKACSNLPDPLNGQVSYPNGD 480
G V Y C+PG+ + + C + TWS + CR CS P NG++ N D
Sbjct: 3192 GQNVSYMCQPGYTIELNGSRVRT-CTTNGTWSGVMPTCRAVTCSTPPQISNGRLEGTNFD 3250
Query: 481 TLFGSKAQFTCNTGFYIIGAETVYCQVSGNVMAWSEPSPLCEKILCKPPGEIPNGKYTNS 660
+G + C+ G+ + + C +G WS P C C PG GK
Sbjct: 3251 --WGFSISYICSAGYELSFPAVLTCVGNG---TWSGEVPQCLPKFCGDPGIPSQGKREGK 3305
Query: 661 HKDVFEYNEVVTYSCLSSTGPDEFSLVGESSLFCIGKDEWSSDPPEC 801
F Y V++SC S F LVG S+ C WS P C
Sbjct: 3306 S---FIYQSEVSFSCNS-----PFILVGSSTRLCQTDGTWSGSSPHC 3344
Score = 66.6 bits (161), Expect = 3e-11
Identities = 51/171 (29%), Positives = 68/171 (39%), Gaps = 1/171 (0%)
Frame = +1
Query: 292 YRPGDRVEYECRPGFRPMVPALPTSSVCQDDNTWSPLQEACRRKACSNLPDP-LNGQVSY 468
Y G V Y C G R ++ S CQ + WS Q C DP G S
Sbjct: 3011 YTFGSTVHYSCT-GKRSLLGQ--ASRTCQLNGHWSGSQPHCSGDTTGTCGDPGTPGHGSR 3067
Query: 469 PNGDTLFGSKAQFTCNTGFYIIGAETVYCQVSGNVMAWSEPSPLCEKILCKPPGEIPNGK 648
D S +F C+TG+ + G+E C +G +W+ P C+ + C PG NGK
Sbjct: 3068 QESDFRTKSTVRFACDTGYILYGSEERTCLSNG---SWTGRQPECKAVQCGNPGTTANGK 3124
Query: 649 YTNSHKDVFEYNEVVTYSCLSSTGPDEFSLVGESSLFCIGKDEWSSDPPEC 801
D ++ V YSCL + + L G S C WS P C
Sbjct: 3125 VFRI--DGTTFSSSVIYSCL-----EGYILSGPSVRQCTANGTWSGSLPNC 3168
Score = 66.2 bits (160), Expect = 4e-11
Identities = 50/187 (26%), Positives = 76/187 (40%), Gaps = 5/187 (2%)
Frame = +1
Query: 277 VLNTTYRPGDRVEYECRPGFRPMVPALPTSSVCQDDNTWSPLQEA--CRRKACSNLPDPL 450
+L T Y G RV Y C G+R L T++ CQ D TWS + C C ++
Sbjct: 2643 ILTTDYLVGTRVTYFCNDGYRLSSKEL-TTATCQSDGTWSNHNKTPRCVVVTCPSINSFT 2701
Query: 451 --NGQVSYPNGDTL-FGSKAQFTCNTGFYIIGAETVYCQVSGNVMAWSEPSPLCEKILCK 621
+G+ NG + +K F+C+ G++ +G ++ C +G +W P C+ I C
Sbjct: 2702 LDHGRWRIVNGSHYEYKTKVVFSCDPGYHGLGPASIECLPNG-TWSWRTERPYCQIISC- 2759
Query: 622 PPGEIPNGKYTNSHKDVFEYNEVVTYSCLSSTGPDEFSLVGESSLFCIGKDEWSSDPPEC 801
GE+P N Y ++C F LVG + C+ WS C
Sbjct: 2760 --GELPTPPNGNKIGTQTSYGSTAIFTCDLG-----FMLVGSAVRECLSSGLWSGSETRC 2812
Query: 802 KGSQMSI 822
I
Sbjct: 2813 LAGHCGI 2819
Score = 57.0 bits (136), Expect = 2e-08
Identities = 46/183 (25%), Positives = 69/183 (37%)
Frame = +1
Query: 292 YRPGDRVEYECRPGFRPMVPALPTSSVCQDDNTWSPLQEACRRKACSNLPDPLNGQVSYP 471
+R V + C G+ + C + +W+ Q C+ C N NG+V
Sbjct: 3072 FRTKSTVRFACDTGY---ILYGSEERTCLSNGSWTGRQPECKAVQCGNPGTTANGKVFRI 3128
Query: 472 NGDTLFGSKAQFTCNTGFYIIGAETVYCQVSGNVMAWSEPSPLCEKILCKPPGEIPNGKY 651
+G T F S ++C G+ + G C +G WS P C I C PG NG
Sbjct: 3129 DG-TTFSSSVIYSCLEGYILSGPSVRQCTANG---TWSGSLPNCTIISCGDPGIPANGL- 3183
Query: 652 TNSHKDVFEYNEVVTYSCLSSTGPDEFSLVGESSLFCIGKDEWSSDPPECKGSQMSISST 831
+ D F + V+Y C L G C WS P C+ ++ S+
Sbjct: 3184 --RYGDDFVVGQNVSYMCQPGY---TIELNGSRVRTCTTNGTWSGVMPTCRA--VTCSTP 3236
Query: 832 PHL 840
P +
Sbjct: 3237 PQI 3239
Score = 50.8 bits (120), Expect = 2e-06
Identities = 46/194 (23%), Positives = 69/194 (35%), Gaps = 6/194 (3%)
Frame = +1
Query: 271 PQVLNTTYRPGDRVEYECRPGFR---PMVPALPTSSVCQDDNTWSPLQEAC---RRKACS 432
P + + R G Y+ F P + ++ +CQ D TWS C R +C
Sbjct: 3294 PGIPSQGKREGKSFIYQSEVSFSCNSPFILVGSSTRLCQTDGTWSGSSPHCIEPTRTSCE 3353
Query: 433 NLPDPLNGQVSYPNGDTLFGSKAQFTCNTGFYIIGAETVYCQVSGNVMAWSEPSPLCEKI 612
N P +G + G + GS QF C G + G+ T C + WS P C
Sbjct: 3354 NPGVPRHGSQNNTFGFQV-GSVVQFHCKKGHLLQGSTTRTCLPD---LTWSGIQPECIPH 3409
Query: 613 LCKPPGEIPNGKYTNSHKDVFEYNEVVTYSCLSSTGPDEFSLVGESSLFCIGKDEWSSDP 792
CK P + D+ + + Y+C P F G C + W+
Sbjct: 3410 SCKQPESPAHANVVG--MDLPSHGYTLIYTC----QPGFFLAGGTEHRVCRSDNTWTGKV 3463
Query: 793 PECKGSQMSISSTP 834
P C+ + P
Sbjct: 3464 PVCEAGSKILVKDP 3477
>ref|NP_073725.2| sushi, von Willebrand factor type A, EGF and pentraxin
domain-containing protein 1 precursor [Mus musculus].
Length = 3567
Score = 85.9 bits (211), Expect = 5e-17
Identities = 54/171 (31%), Positives = 75/171 (43%)
Frame = +1
Query: 292 YRPGDRVEYECRPGFRPMVPALPTSSVCQDDNTWSPLQEACRRKACSNLPDPLNGQVSYP 471
Y G V + C G + + T C + W L+ +C +C P P NG V
Sbjct: 1804 YTVGTAVTFSCDEGHELVGVSTIT---CLETGEWDRLRPSCEAISCGVPPVPENGGVD-- 1858
Query: 472 NGDTLFGSKAQFTCNTGFYIIGAETVYCQVSGNVMAWSEPSPLCEKILCKPPGEIPNGKY 651
+GSK + C+ G+ + G E C SG+ WS SP+CE + C P +I NGKY
Sbjct: 1859 GSAFTYGSKVVYRCDKGYTLSGDEESACLASGS---WSHSSPVCELVKCSQPEDINNGKY 1915
Query: 652 TNSHKDVFEYNEVVTYSCLSSTGPDEFSLVGESSLFCIGKDEWSSDPPECK 804
S Y + +YSC + +SL G S L C W PP C+
Sbjct: 1916 ILSG---LTYLSIASYSC-----ENGYSLQGPSLLECTASGSWDRAPPSCQ 1958
Score = 85.5 bits (210), Expect = 6e-17
Identities = 54/167 (32%), Positives = 76/167 (45%)
Frame = +1
Query: 301 GDRVEYECRPGFRPMVPALPTSSVCQDDNTWSPLQEACRRKACSNLPDPLNGQVSYPNGD 480
G V+Y C GF + PT +CQ D+TWS C C + LNG +
Sbjct: 2400 GSTVKYLCVDGF--FLRGSPTI-LCQADSTWSSPLPECVPVECPQPEEILNGIIHVQG-- 2454
Query: 481 TLFGSKAQFTCNTGFYIIGAETVYCQVSGNVMAWSEPSPLCEKILCKPPGEIPNGKYTNS 660
+ S +TC GF ++G T C +G W P+C+ I C P EI NG++++
Sbjct: 2455 LAYLSTTLYTCKPGFELVGNATTLCGENGQ---WLGGKPMCKPIECPEPKEILNGQFSSV 2511
Query: 661 HKDVFEYNEVVTYSCLSSTGPDEFSLVGESSLFCIGKDEWSSDPPEC 801
F+Y + +TY C F L G SL C+ +W DPP C
Sbjct: 2512 S---FQYGQTITYFCDRG-----FRLEGPKSLTCLETGDWDMDPPSC 2550
Score = 75.1 bits (183), Expect = 9e-14
Identities = 54/192 (28%), Positives = 78/192 (40%), Gaps = 6/192 (3%)
Frame = +1
Query: 238 CDEPPKFE-SMRPQVLNTTYRPGDRVEYECRPGFRPMVPALPTSSV--CQDDNTWSP--L 402
C++PP S+ V + G V ++C GF L TS+ C WSP L
Sbjct: 2082 CEKPPSVSYSILESVSKAKFAAGSVVSFKCMEGF-----VLNTSAKIECLRGGEWSPSPL 2136
Query: 403 QEACRRKACSNLPDPLNGQVSYPNGDTL-FGSKAQFTCNTGFYIIGAETVYCQVSGNVMA 579
C C P NG YP+G FG+ ++C+ GFYI G + C+ +G
Sbjct: 2137 SVQCIPVRCGEPPSIANG---YPSGTNYSFGAVVAYSCHKGFYIKGEKKSTCEATGQ--- 2190
Query: 580 WSEPSPLCEKILCKPPGEIPNGKYTNSHKDVFEYNEVVTYSCLSSTGPDEFSLVGESSLF 759
WS+P+P C + C P ++ NG ++ FE + C + G
Sbjct: 2191 WSKPTPTCHPVSCNEPPKVENGFLEHTTGRTFE--SEARFQCNPG-----YKAAGSPVFV 2243
Query: 760 CIGKDEWSSDPP 795
C W SD P
Sbjct: 2244 CQANRHWHSDAP 2255
Score = 72.0 bits (175), Expect = 7e-13
Identities = 60/194 (30%), Positives = 89/194 (45%), Gaps = 4/194 (2%)
Frame = +1
Query: 235 ACDEPPKFESMRPQVLNTTYRPGD-RVEYECRPGFRPMVPALPTSSVCQDDNTW-SPLQE 408
+C+EPPK E+ + +TT R + ++C PG++ A VCQ + W S
Sbjct: 2202 SCNEPPKVENGFLE--HTTGRTFESEARFQCNPGYKA---AGSPVFVCQANRHWHSDAPL 2256
Query: 409 ACRRKACSNLPDPLNGQVSYPNGDTL-FGSKAQFTCNTGFYIIGAETVYCQVSGNVMAWS 585
+C C P NG + G++ GSK QF CN G+ ++G + CQ SG WS
Sbjct: 2257 SCTPLNCGKPPPIQNG---FLKGESFEVGSKVQFVCNEGYELVGDNSWTCQKSGK---WS 2310
Query: 586 -EPSPLCEKILCKPPGEIPNGKYTNSHKDVFEYNEVVTYSCLSSTGPDEFSLVGESSLFC 762
+PSP C C P + N K++ V+T SC + +L G S L C
Sbjct: 2311 KKPSPKCVPTKCAEPPLLENQLVL---KELASEVGVMTISC-----KEGHALQGPSVLKC 2362
Query: 763 IGKDEWSSDPPECK 804
+ +W+ P CK
Sbjct: 2363 LPSGQWNGSFPICK 2376
Score = 72.0 bits (175), Expect = 7e-13
Identities = 49/168 (29%), Positives = 68/168 (40%), Gaps = 1/168 (0%)
Frame = +1
Query: 301 GDRVEYECRPGFRPM-VPALPTSSVCQDDNTWSPLQEACRRKACSNLPDPLNGQVSYPNG 477
G V Y C PG+ + +P L +CQ+D TW+ +C C P NG + +
Sbjct: 2675 GTMVSYSCEPGYELLGIPVL----ICQEDGTWNGTAPSCISIECDLPVAPENGFLHFT-- 2728
Query: 478 DTLFGSKAQFTCNTGFYIIGAETVYCQVSGNVMAWSEPSPLCEKILCKPPGEIPNGKYTN 657
T GS AQ++C G + G+ C + WS P CE I C P + NG
Sbjct: 2729 QTTMGSAAQYSCKPGHILEGSHLRLCLQN---KQWSGTVPRCEAISCSKPNPLWNGSIKG 2785
Query: 658 SHKDVFEYNEVVTYSCLSSTGPDEFSLVGESSLFCIGKDEWSSDPPEC 801
D + Y V+ Y C S + L G C +W P C
Sbjct: 2786 ---DDYSYLGVLYYECDSG-----YILNGSKKRTCQENRDWDGHEPMC 2825
Score = 70.9 bits (172), Expect = 2e-12
Identities = 42/128 (32%), Positives = 60/128 (46%), Gaps = 3/128 (2%)
Frame = +1
Query: 427 CSNLPDPLNGQVSY---PNGDTLFGSKAQFTCNTGFYIIGAETVYCQVSGNVMAWSEPSP 597
CS+ P L G V + +G+ GSK C+ GF ++G YC G W++P P
Sbjct: 1627 CSDCPS-LEGSVPHLRPASGNRKPGSKVSLFCDPGFQMVGNPVQYCLNQGQ---WTQPLP 1682
Query: 598 LCEKILCKPPGEIPNGKYTNSHKDVFEYNEVVTYSCLSSTGPDEFSLVGESSLFCIGKDE 777
CE+I C P + NG Y+ + F VTY C S + L+G+S +FC
Sbjct: 1683 HCERIRCGLPPALENGFYS---AEDFHAGSTVTYQCTSG-----YYLLGDSRMFCTDNGS 1734
Query: 778 WSSDPPEC 801
W+ P C
Sbjct: 1735 WNGISPSC 1742
Score = 68.9 bits (167), Expect = 6e-12
Identities = 49/188 (26%), Positives = 74/188 (39%)
Frame = +1
Query: 238 CDEPPKFESMRPQVLNTTYRPGDRVEYECRPGFRPMVPALPTSSVCQDDNTWSPLQEACR 417
C PP + R + T++ + Y CR GF + S +C + +WS +C
Sbjct: 2830 CGSPPVPTNGRVKGEEYTFQK--EITYSCREGF---ILEGARSRICLTNGSWSGATPSCM 2884
Query: 418 RKACSNLPDPLNGQVSYPNGDTLFGSKAQFTCNTGFYIIGAETVYCQVSGNVMAWSEPSP 597
C P NG D F + F C G+ + GA + CQ +G W P
Sbjct: 2885 PVRCPAPPQVPNGVAD--GLDYGFKKEVAFHCLEGYVLQGAPRLTCQSNGT---WDAEVP 2939
Query: 598 LCEKILCKPPGEIPNGKYTNSHKDVFEYNEVVTYSCLSSTGPDEFSLVGESSLFCIGKDE 777
+C+ C PP ++P G + N F + + Y C + + L G S C+
Sbjct: 2940 VCKPATCGPPADLPQG-FPNGFS--FYHGGHIQYQCFTG-----YKLHGNPSRRCLPNGS 2991
Query: 778 WSSDPPEC 801
WS P C
Sbjct: 2992 WSGSSPSC 2999
Score = 68.2 bits (165), Expect = 1e-11
Identities = 51/189 (26%), Positives = 72/189 (38%)
Frame = +1
Query: 238 CDEPPKFESMRPQVLNTTYRPGDRVEYECRPGFRPMVPALPTSSVCQDDNTWSPLQEACR 417
C EPP E+ VL + C+ G P++ C W+ C+
Sbjct: 2322 CAEPPLLENQL--VLKELASEVGVMTISCKEGHALQGPSVLK---CLPSGQWNGSFPICK 2376
Query: 418 RKACSNLPDPLNGQVSYPNGDTLFGSKAQFTCNTGFYIIGAETVYCQVSGNVMAWSEPSP 597
C + P + V +G FGS ++ C GF++ G+ T+ CQ WS P P
Sbjct: 2377 MVLCPS-PPLIPFGVPASSGALHFGSTVKYLCVDGFFLRGSPTILCQADS---TWSSPLP 2432
Query: 598 LCEKILCKPPGEIPNGKYTNSHKDVFEYNEVVTYSCLSSTGPDEFSLVGESSLFCIGKDE 777
C + C P EI NG H Y Y+C F LVG ++ C +
Sbjct: 2433 ECVPVECPQPEEILNGII---HVQGLAYLSTTLYTCKPG-----FELVGNATTLCGENGQ 2484
Query: 778 WSSDPPECK 804
W P CK
Sbjct: 2485 WLGGKPMCK 2493
Score = 68.2 bits (165), Expect = 1e-11
Identities = 42/163 (25%), Positives = 69/163 (42%)
Frame = +1
Query: 316 YECRPGFRPMVPALPTSSVCQDDNTWSPLQEACRRKACSNLPDPLNGQVSYPNGDTLFGS 495
YEC G+ + CQ++ W + C C + P P NG+V + F
Sbjct: 2796 YECDSGY---ILNGSKKRTCQENRDWDGHEPMCIPVDCGSPPVPTNGRVK--GEEYTFQK 2850
Query: 496 KAQFTCNTGFYIIGAETVYCQVSGNVMAWSEPSPLCEKILCKPPGEIPNGKYTNSHKDVF 675
+ ++C GF + GA + C +G+ WS +P C + C P ++PNG +
Sbjct: 2851 EITYSCREGFILEGARSRICLTNGS---WSGATPSCMPVRCPAPPQVPNGVADGLD---Y 2904
Query: 676 EYNEVVTYSCLSSTGPDEFSLVGESSLFCIGKDEWSSDPPECK 804
+ + V + CL + + L G L C W ++ P CK
Sbjct: 2905 GFKKEVAFHCL-----EGYVLQGAPRLTCQSNGTWDAEVPVCK 2942
Score = 65.9 bits (159), Expect = 5e-11
Identities = 49/168 (29%), Positives = 70/168 (41%)
Frame = +1
Query: 301 GDRVEYECRPGFRPMVPALPTSSVCQDDNTWSPLQEACRRKACSNLPDPLNGQVSYPNGD 480
G ++Y+C G++ + P S C + +WS +C CS P+ Q + D
Sbjct: 2965 GGHIQYQCFTGYK--LHGNP-SRRCLPNGSWSGSSPSCLPCRCST---PIIQQGTINATD 3018
Query: 481 TLFGSKAQFTCNTGFYIIGAETVYCQVSGNVMAWSEPSPLCEKILCKPPGEIPNGKYTNS 660
G Q C GF ++G + C +G WS+ PLCE C P IPN
Sbjct: 3019 LGCGKTVQIECFKGFKLLGLSEITCDANGQ---WSDV-PLCEHAQCGPLPTIPNAIVLEG 3074
Query: 661 HKDVFEYNEVVTYSCLSSTGPDEFSLVGESSLFCIGKDEWSSDPPECK 804
+ VVTYSC +++ G S L C K WS P C+
Sbjct: 3075 S---LSEDNVVTYSCRPG-----YTMQGSSDLICTEKAIWSQPYPTCE 3114
Score = 64.3 bits (155), Expect = 2e-10
Identities = 54/242 (22%), Positives = 86/242 (35%), Gaps = 43/242 (17%)
Frame = +1
Query: 238 CDEPPKFESMRPQV--LNTTYRPGDRVEYECRPGFRPMVPALPTSSVCQDDNTWSPLQEA 411
C + P E P + + +PG +V C PGF+ + + C + W+
Sbjct: 1627 CSDCPSLEGSVPHLRPASGNRKPGSKVSLFCDPGFQMVGNPV---QYCLNQGQWTQPLPH 1683
Query: 412 CRRKACSNLPDPLNGQVSYPNGDTLFGSKAQFTCNTGFYIIGAETVYCQVSGNVMAWSEP 591
C R C P NG Y D GS + C +G+Y++G ++C +G +W+
Sbjct: 1684 CERIRCGLPPALENG--FYSAEDFHAGSTVTYQCTSGYYLLGDSRMFCTDNG---SWNGI 1738
Query: 592 SPLC-----------------------------------------EKILCKPPGEIPNGK 648
SP C E + CK P NG
Sbjct: 1739 SPSCLDVDECAVGSDCSEHASCLNTNGSYVCSCNPPYTGDGKNCAEPVKCKAPENPENG- 1797
Query: 649 YTNSHKDVFEYNEVVTYSCLSSTGPDEFSLVGESSLFCIGKDEWSSDPPECKGSQMSISS 828
+S +++ VT+SC + LVG S++ C+ EW P C+ +
Sbjct: 1798 --HSSGEIYTVGTAVTFSC-----DEGHELVGVSTITCLETGEWDRLRPSCEAISCGVPP 1850
Query: 829 TP 834
P
Sbjct: 1851 VP 1852
Score = 60.8 bits (146), Expect = 2e-09
Identities = 42/185 (22%), Positives = 72/185 (38%)
Frame = +1
Query: 238 CDEPPKFESMRPQVLNTTYRPGDRVEYECRPGFRPMVPALPTSSVCQDDNTWSPLQEACR 417
C+ P +F + + + NTT P + + C G+ + P + C + TW+ L C+
Sbjct: 3295 CETPAEFPNGKAVLENTTSGPS--LLFSCHRGYT--LEGSPEAH-CTANGTWNHLTPLCK 3349
Query: 418 RKACSNLPDPLNGQVSYPNGDTLFGSKAQFTCNTGFYIIGAETVYCQVSGNVMAWSEPSP 597
C +P + + C GF + G + C W+ +
Sbjct: 3350 PNPCP-VPFVIPENAVLSEKEFYVDQNVSIKCREGFLLKGNGVITCSPDET---WTHTNA 3405
Query: 598 LCEKILCKPPGEIPNGKYTNSHKDVFEYNEVVTYSCLSSTGPDEFSLVGESSLFCIGKDE 777
CEKI C PP + N + ++Y +++TYSC S + L G C+
Sbjct: 3406 RCEKISCGPPSHVENAIARGVY---YQYGDMITYSCYSG-----YMLEGSLRSVCLENGT 3457
Query: 778 WSSDP 792
W+ P
Sbjct: 3458 WTPSP 3462
Score = 60.1 bits (144), Expect = 3e-09
Identities = 52/197 (26%), Positives = 72/197 (36%), Gaps = 8/197 (4%)
Frame = +1
Query: 235 ACDEPPKFESMRPQVLNTTYRPGDRVEYECRPGFRPMVPALPTSSVCQDDNTWSP----L 402
+CDEPP + P+ + + GD Y C G+ A + +C W P
Sbjct: 2019 SCDEPPNVDHASPETAHRLF--GDTAFYYCADGYSL---ADNSQLICNAQGNWVPPAGQA 2073
Query: 403 QEACRRKACSNLPDPLNGQV-SYPNGDTLFGSKAQFTCNTGFYIIGAETVYCQVSGNVMA 579
C C P + S GS F C GF + + + C G
Sbjct: 2074 VPRCIAHFCEKPPSVSYSILESVSKAKFAAGSVVSFKCMEGFVLNTSAKIECLRGGE--- 2130
Query: 580 WSEPSPL---CEKILCKPPGEIPNGKYTNSHKDVFEYNEVVTYSCLSSTGPDEFSLVGES 750
WS PSPL C + C P I NG + ++ + + VV YSC F + GE
Sbjct: 2131 WS-PSPLSVQCIPVRCGEPPSIANGYPSGTN---YSFGAVVAYSCHKG-----FYIKGEK 2181
Query: 751 SLFCIGKDEWSSDPPEC 801
C +WS P C
Sbjct: 2182 KSTCEATGQWSKPTPTC 2198
Score = 60.1 bits (144), Expect = 3e-09
Identities = 59/241 (24%), Positives = 83/241 (34%), Gaps = 42/241 (17%)
Frame = +1
Query: 238 CDEPPKFESMRPQVLNTTYRPGDRVEYECRPGFRPMVPALPTSSVCQDDNTWSPLQEACR 417
C EP E + Q + +++ G + Y C GFR P S C + W +C
Sbjct: 2497 CPEPK--EILNGQFSSVSFQYGQTITYFCDRGFRLEGPK---SLTCLETGDWDMDPPSCD 2551
Query: 418 RKACSNLPDPL-NGQVSYPNGDTLFGSKAQFTCNTGFYIIGAETVYCQVSGNVMAWSEPS 594
CS+ P P+ NG V D +G+ ++C GF ++G C+ SG WS S
Sbjct: 2552 AIHCSD-PQPIENGFVE--GADYRYGAMIIYSCFPGFQVLGHAMQTCEESG----WSSSS 2604
Query: 595 PLCEKILCKPPGEIPNGKYTN--------------------------------------- 657
P C I C P I G T
Sbjct: 2605 PTCVPIDCGLPPHIDFGDCTKVRDGQGHFDQEDDMMEVPYLAHPQHLEATAKALENTKES 2664
Query: 658 --SHKDVFEYNEVVTYSCLSSTGPDEFSLVGESSLFCIGKDEWSSDPPECKGSQMSISST 831
SH F Y +V+YSC + L+G L C W+ P C + +
Sbjct: 2665 PASHASHFLYGTMVSYSC-----EPGYELLGIPVLICQEDGTWNGTAPSCISIECDLPVA 2719
Query: 832 P 834
P
Sbjct: 2720 P 2720
Score = 59.7 bits (143), Expect = 4e-09
Identities = 34/109 (31%), Positives = 52/109 (47%), Gaps = 4/109 (3%)
Frame = +1
Query: 322 CRPGFRPMVPALPTSSVCQDDNTWSPLQEACRRKACSNLPDPLNGQVSYPNGDTLFGSKA 501
CRPGF + ++ +CQ + WS + CR + C +L P +G +S + + +
Sbjct: 407 CRPGFDLVGSSI---HLCQPNGLWSGTESFCRVRTCPHLRQPKHGHISCSTAEMSYNTLC 463
Query: 502 QFTCNTGFYIIGAETVYCQVSGNVMAWSEPSPLCEKILC----KPPGEI 636
TCN G+ + G+ + CQ GN W P P C + C KP G I
Sbjct: 464 LVTCNEGYRLEGSTRLTCQ--GNAQ-WDGPEPRCVERHCATFQKPKGVI 509
Score = 59.3 bits (142), Expect = 5e-09
Identities = 39/181 (21%), Positives = 70/181 (38%)
Frame = +1
Query: 238 CDEPPKFESMRPQVLNTTYRPGDRVEYECRPGFRPMVPALPTSSVCQDDNTWSPLQEACR 417
C +P + + + TY Y C G+ P+L C +W +C+
Sbjct: 1904 CSQPEDINNGKYILSGLTYL--SIASYSCENGYSLQGPSLLE---CTASGSWDRAPPSCQ 1958
Query: 418 RKACSNLPDPLNGQVSYPNGDTLFGSKAQFTCNTGFYIIGAETVYCQVSGNVMAWSEPSP 597
+C P + ++ N FG+ +TC G+ + G +T+ CQ +G W+ +
Sbjct: 1959 LVSCGEPPIVKDAVITGSN--FTFGNTVAYTCKEGYTLAGPDTIVCQANGK---WNSSNH 2013
Query: 598 LCEKILCKPPGEIPNGKYTNSHKDVFEYNEVVTYSCLSSTGPDEFSLVGESSLFCIGKDE 777
C + C P + + +H+ + + Y C D +SL S L C +
Sbjct: 2014 QCLAVSCDEPPNVDHASPETAHR---LFGDTAFYYC-----ADGYSLADNSQLICNAQGN 2065
Query: 778 W 780
W
Sbjct: 2066 W 2066
Score = 57.4 bits (137), Expect = 2e-08
Identities = 40/148 (27%), Positives = 57/148 (38%), Gaps = 2/148 (1%)
Frame = +1
Query: 367 SVCQDDNTWSP--LQEACRRKACSNLPDPLNGQVSYPNGDTLFGSKAQFTCNTGFYIIGA 540
S CQ D TW P E+C C + P +G V FGS + C+ G+ + G
Sbjct: 3215 STCQPDGTWEPPFSDESCIPVVCGHPESPAHGSVV--GNKHSFGSTIVYQCDPGYKLEGN 3272
Query: 541 ETVYCQVSGNVMAWSEPSPLCEKILCKPPGEIPNGKYTNSHKDVFEYNEVVTYSCLSSTG 720
CQ + WS +C + C+ P E PNGK + + +SC
Sbjct: 3273 RERICQENRQ---WSGEVAVCRENRCETPAEFPNGKAVLENT---TSGPSLLFSCHRG-- 3324
Query: 721 PDEFSLVGESSLFCIGKDEWSSDPPECK 804
++L G C W+ P CK
Sbjct: 3325 ---YTLEGSPEAHCTANGTWNHLTPLCK 3349
Score = 51.2 bits (121), Expect = 1e-06
Identities = 39/142 (27%), Positives = 57/142 (40%), Gaps = 6/142 (4%)
Frame = +1
Query: 301 GDRVEYECRPGFRPMVPALPTSSV-CQDDNTWSPLQEACRRKACSNLPDPLNGQVSYPNG 477
G V+ EC GF+ L S + C + WS + C C LP + PN
Sbjct: 3022 GKTVQIECFKGFK----LLGLSEITCDANGQWSDVP-LCEHAQCGPLP-------TIPNA 3069
Query: 478 DTLFGSKAQ-----FTCNTGFYIIGAETVYCQVSGNVMAWSEPSPLCEKILCKPPGEIPN 642
L GS ++ ++C G+ + G+ + C WS+P P CE + C PP + N
Sbjct: 3070 IVLEGSLSEDNVVTYSCRPGYTMQGSSDLICTEKA---IWSQPYPTCEPLSCGPPPTVAN 3126
Query: 643 GKYTNSHKDVFEYNEVVTYSCL 708
T + Y V CL
Sbjct: 3127 AVATG---EAHTYESKVKLRCL 3145
>ref|NP_031784.1| complement receptor type 2 [Mus musculus].
Length = 1032
Score = 84.3 bits (207), Expect = 1e-16
Identities = 58/213 (27%), Positives = 91/213 (42%), Gaps = 8/213 (3%)
Frame = +1
Query: 217 LPMPSDACDEPPKF-ESMRPQVLNTTYRPGDRVEYECRPGFRPMVPALPTSSVCQDDNTW 393
+P+ C PPK + + PG + Y C PG+ + + C + W
Sbjct: 404 VPVCEKGCQAPPKIINGQKEDSYLLNFDPGTSIRYSCDPGY---LLVGEDTIHCTPEGKW 460
Query: 394 SPLQEACRRKACSNLPDPLNGQVSYPNGDTLFGSKAQFTCNTGFYIIGAETVYCQVSGNV 573
+P+ C C P+ + + + +C+ GF + +E+ Y Q+
Sbjct: 461 TPITPQCTVAECK----PVGPHLFKRPQNQFIRTAVNSSCDEGFQL--SESAY-QLCQGT 513
Query: 574 MAWSEPSPLCEKILCKPPGEIPNGKYTNSHKDVFEYNEVVTYSCLSSTGPDE---FSLVG 744
+ W LC++I C PP I NG +T S + Y VVTY C GP+E F L+G
Sbjct: 514 IPWFIEIRLCKEITCPPPPVIHNGTHTWSSSEDVPYGTVVTYMCY--PGPEEGVKFKLIG 571
Query: 745 ESSLFCI----GKDEWSSDPPECKGSQMSISST 831
E ++ C G+ WSS P CK S ++ T
Sbjct: 572 EQTIHCTSDSRGRGSWSSPAPLCKLSLPAVQCT 604
Score = 81.6 bits (200), Expect = 9e-16
Identities = 50/172 (29%), Positives = 77/172 (44%), Gaps = 5/172 (2%)
Frame = +1
Query: 301 GDRVEYECRPGFRPMVPALPTSSVCQDDNTWSPLQEACRRKACSNLPDPLNGQVSYPNGD 480
G V Y C PG+ ++ T C W + C+ C + NGQV P
Sbjct: 177 GLSVTYSCEPGY--LLTGKKTIK-CLSSGDWDGVIPTCKEAQCEHPGKFPNGQVKEPLSL 233
Query: 481 TLFGSKAQFTCNTGFYIIGAETVYCQVSGNVMAWSEPSPLCEKILCKPPGEIPNGKYTNS 660
+ G+ F+CN G+ + G + C + W++ P+C++ILC PP + NG +T S
Sbjct: 234 QV-GTTVYFSCNEGYQLQGQPSSQCVIVEQKAIWTK-KPVCKEILCPPPPPVRNGSHTGS 291
Query: 661 HKDVFEYNEVVTYSCLSSTGPD-EFSLVGESSLFCIGKDE----WSSDPPEC 801
+ Y VTY+C S F+L+GE ++ C + WS P C
Sbjct: 292 FSENVPYGSTVTYTCDPSPEKGVSFTLIGEKTINCTTGSQKTGIWSGPAPYC 343
Score = 80.9 bits (198), Expect = 2e-15
Identities = 57/208 (27%), Positives = 93/208 (44%), Gaps = 4/208 (1%)
Frame = +1
Query: 190 WVSLALVFLLPMPSDACDEPPKFESMRPQVLNTTYRPGDRVEYECRPGFRPMVPALPTSS 369
W S A + L +P+ C + ++ Y D V ++C G+ + + +
Sbjct: 587 WSSPAPLCKLSLPAVQCTDVHVENGVKLTDNKAPYFYNDSVMFKCDDGY---ILSGSSQI 643
Query: 370 VCQDDNTWSPLQEACRRKACSNLPDPLNGQVSYPNGDTLFGSKAQFTCNTGFYIIGAETV 549
C+ +NTW P + C+++ C P ++G P+ + + TC G+ + G
Sbjct: 644 RCKANNTWDPEKPLCKKEGCE--PMRVHG---LPDDSHI--KLVKRTCQNGYQLTGYTYE 696
Query: 550 YCQVSGNVMAWSEPSPLCEKILCKPPGEIPNGKYTNSHKDVFEYNEVVTYSCLSSTGPDE 729
CQ + N W + +C ILC+PP +I NG +T F Y V+Y C +
Sbjct: 697 KCQNAENG-TWFKKIEVCTVILCQPPPKIANGGHTGMMAKHFLYGNEVSYEC-----DEG 750
Query: 730 FSLVGESSLFCI----GKDEWSSDPPEC 801
F L+GE SL C+ G WS PP+C
Sbjct: 751 FYLLGEKSLQCVNDSKGHGSWSGPPPQC 778
Score = 76.6 bits (187), Expect = 3e-14
Identities = 66/225 (29%), Positives = 94/225 (41%), Gaps = 16/225 (7%)
Frame = +1
Query: 187 LWVSLALVFLLPMPSDACDEPPKFESMRPQVLNTTYRPGDRVEYECRPGFRPM-VPALPT 363
LWV L+ + +CD PP+ ++ R + PG + Y C P +R + A+
Sbjct: 7 LWVFFTLI-TPGVLEISCDPPPEVKNARKPYYSLPIVPGTVLRYTCSPSYRLIGEKAIFC 65
Query: 364 SSVCQDDNTWSPLQEAC----RRKACSNLPDPLNGQVSYPNGDTLFGSKA--------QF 507
S Q TW C + +CS DP+ P G GSKA F
Sbjct: 66 ISENQVHATWDKAPPICESVNKTISCS---DPI-----VPGGFMNKGSKAPFRHGDSVTF 117
Query: 508 TCNTGFYIIGAETVYCQVSGNVMAWSEPSPLCEK---ILCKPPGEIPNGKYTNSHKDVFE 678
TC F + G++TV+CQ N M P+CE + C I NG +T H D F
Sbjct: 118 TCKANFTMKGSKTVWCQ--ANEMWGPTALPVCESDFPLECPSLPTIHNGHHTGQHVDQFV 175
Query: 679 YNEVVTYSCLSSTGPDEFSLVGESSLFCIGKDEWSSDPPECKGSQ 813
VTYSC + L G+ ++ C+ +W P CK +Q
Sbjct: 176 AGLSVTYSC-----EPGYLLTGKKTIKCLSSGDWDGVIPTCKEAQ 215
Score = 67.0 bits (162), Expect = 2e-11
Identities = 51/198 (25%), Positives = 80/198 (40%), Gaps = 9/198 (4%)
Frame = +1
Query: 238 CDEPPKFESM-RPQVLNTTYRPGDRVEYECRPGFRPM-VPALPTSSVCQDDNTWS-PLQE 408
C PPK + ++ + G+ V YEC GF + +L + + +WS P +
Sbjct: 718 CQPPPKIANGGHTGMMAKHFLYGNEVSYECDEGFYLLGEKSLQCVNDSKGHGSWSGPPPQ 777
Query: 409 ACRRKACSNLPDPL---NGQVSYPNGDTLFGSKAQFTCNTGFYIIGAETVYCQVSGNVMA 579
+ ++ PDP +++ + F CN GF + G+ + C +
Sbjct: 778 CLQSSPLTHCPDPEVKHGYKLNKTHSAFSHNDIVHFVCNQGFIMNGSHLIRCHTNNT--- 834
Query: 580 WSEPSPLCEK---ILCKPPGEIPNGKYTNSHKDVFEYNEVVTYSCLSSTGPDEFSLVGES 750
W P C + + C+ P IPNG +T F V YSC F + GE+
Sbjct: 835 WLPGVPTCIRKASLGCQSPSTIPNGNHTGGSIARFPPGMSVMYSCYQG-----FLMAGEA 889
Query: 751 SLFCIGKDEWSSDPPECK 804
L C + WS PP CK
Sbjct: 890 RLICTHEGTWSQPPPFCK 907
Score = 62.4 bits (150), Expect = 6e-10
Identities = 55/242 (22%), Positives = 88/242 (36%), Gaps = 21/242 (8%)
Frame = +1
Query: 226 PSDACDEPPKFESMRPQVLNTTYRPGDRVEYECRPGFRPMVPALPTSSVCQDDNTWSPLQ 405
P C +P + ++ + D V + C GF L C +NTW P
Sbjct: 783 PLTHCPDPEVKHGYKLNKTHSAFSHNDIVHFVCNQGFIMNGSHLIR---CHTNNTWLPGV 839
Query: 406 EACRRKACSNLPDPLNGQVSYPNGDTLFGSKAQF--------TCNTGFYIIGAETVYCQV 561
C RKA P + PNG+ GS A+F +C GF + G + C
Sbjct: 840 PTCIRKASLGCQSPS----TIPNGNHTGGSIARFPPGMSVMYSCYQGFLMAGEARLICTH 895
Query: 562 SGNVMAWSEPSPLCEKILCKPPGEIPNGKYTNSHKDVFEYNEVVTYSCLSSTGPDEFSLV 741
G WS+P P C+++ C P + + + + VT C D ++L
Sbjct: 896 EGT---WSQPPPFCKEVNCSFPEDTNGIQKGFQPGKTYRFGATVTLEC-----EDGYTLE 947
Query: 742 GESSLFCIGKDEWSSDPPECK-------------GSQMSISSTPHL*LLVSTLDKNFTTK 882
G C +W+ CK GS + I + +++ + N+ TK
Sbjct: 948 GSPQSQCQDDSQWNPPLALCKYRSTIPLICGISVGSALIILMSVGFCMILKHRESNYYTK 1007
Query: 883 VK 888
+
Sbjct: 1008 TR 1009
Score = 60.8 bits (146), Expect = 2e-09
Identities = 53/209 (25%), Positives = 83/209 (39%), Gaps = 3/209 (1%)
Frame = +1
Query: 187 LWVSLALVFLLPMPSDACDEPPKFESMRPQVLNTTYRPGDRVEYECRPGFRPMVPALPTS 366
+W A +L + C +P +L +Y D V + C PGF S
Sbjct: 335 IWSGPAPYCVLSTSAVLCLQPKIKRGQILSILKDSYSYNDTVAFSCEPGF---TLKGNRS 391
Query: 367 SVCQDDNTWSPLQEACRRKACSNLPDPLNGQV--SY-PNGDTLFGSKAQFTCNTGFYIIG 537
C TW P C K C P +NGQ SY N D G+ +++C+ G+ ++G
Sbjct: 392 IRCNAHGTWEPPVPVC-EKGCQAPPKIINGQKEDSYLLNFDP--GTSIRYSCDPGYLLVG 448
Query: 538 AETVYCQVSGNVMAWSEPSPLCEKILCKPPGEIPNGKYTNSHKDVFEYNEVVTYSCLSST 717
+T++C G W+ +P C CKP G H N+ + + ++S+
Sbjct: 449 EDTIHCTPEGK---WTPITPQCTVAECKPVG---------PHLFKRPQNQFIR-TAVNSS 495
Query: 718 GPDEFSLVGESSLFCIGKDEWSSDPPECK 804
+ F L + C G W + CK
Sbjct: 496 CDEGFQLSESAYQLCQGTIPWFIEIRLCK 524
>ref|NP_444401.2| CUB and sushi domain-containing protein 1 precursor [Mus musculus].
Length = 3564
Score = 80.1 bits (196), Expect = 3e-15
Identities = 57/203 (28%), Positives = 78/203 (38%), Gaps = 4/203 (1%)
Frame = +1
Query: 286 TTYRPGDRVEYECRPGFRPMVPALPTSSVCQDDNTWSPLQEACRRKACSNLPDPLN---- 453
T + D V + C G+R + + C+ + WS CR CS+ N
Sbjct: 2752 TEFNLNDLVNFTCHTGYRLQGAS---RAQCRSNGQWSSPLPICRVVNCSDPGSVENAVRH 2808
Query: 454 GQVSYPNGDTLFGSKAQFTCNTGFYIIGAETVYCQVSGNVMAWSEPSPLCEKILCKPPGE 633
GQ ++P +G+ + C TGFY++G+ + C SG W P C I C PG
Sbjct: 2809 GQQNFPESFE-YGTSVMYHCKTGFYLLGSSALTCMASG---LWDRSLPKCLAISCGHPGV 2864
Query: 634 IPNGKYTNSHKDVFEYNEVVTYSCLSSTGPDEFSLVGESSLFCIGKDEWSSDPPECKGSQ 813
N T ++F Y V YSC L G S+ C WS P C G+
Sbjct: 2865 PANAVLTG---ELFTYGATVQYSCKGGQ-----ILTGNSTRVCQEDSHWSGSLPHCSGNS 2916
Query: 814 MSISSTPHL*LLVSTLDKNFTTK 882
P S L F TK
Sbjct: 2917 PGFCGDPGTPAHGSRLGDEFKTK 2939
Score = 74.7 bits (182), Expect = 1e-13
Identities = 53/169 (31%), Positives = 73/169 (43%), Gaps = 2/169 (1%)
Frame = +1
Query: 301 GDRVEYECRPGFRPMVPALPTSSVCQDDNTWSPLQEA--CRRKACSNLPDPLNGQVSYPN 474
G +V C PG+ L CQ + TWS ++ C+ +C +L P NG
Sbjct: 2581 GAQVLLSCSPGYFLQGQRLLQ---CQANGTWSTEEDRPRCKVISCGSLSFPPNGNKI--G 2635
Query: 475 GDTLFGSKAQFTCNTGFYIIGAETVYCQVSGNVMAWSEPSPLCEKILCKPPGEIPNGKYT 654
T++G+ A FTCNTG+ ++G+ C +G WS C C P I NG +
Sbjct: 2636 TLTIYGATAIFTCNTGYTLVGSHVRECLANG---LWSGSETRCLAGHCGSPDPIVNGHIS 2692
Query: 655 NSHKDVFEYNEVVTYSCLSSTGPDEFSLVGESSLFCIGKDEWSSDPPEC 801
D F Y + V Y C F LVG S C+ +WS P C
Sbjct: 2693 G---DGFSYRDTVVYQCNPG-----FRLVGTSVRICLQDHKWSGQTPVC 2733
Score = 68.2 bits (165), Expect = 1e-11
Identities = 44/164 (26%), Positives = 64/164 (39%)
Frame = +1
Query: 310 VEYECRPGFRPMVPALPTSSVCQDDNTWSPLQEACRRKACSNLPDPLNGQVSYPNGDTLF 489
V Y+C PG+ P PT C D TW+ + C+ C+ P NG+V D +
Sbjct: 3059 VSYQCNPGYLMEPPTSPTIR-CTKDGTWNQSRPLCKAVLCNQPPPVPNGKVE--GSDFRW 3115
Query: 490 GSKAQFTCNTGFYIIGAETVYCQVSGNVMAWSEPSPLCEKILCKPPGEIPNGKYTNSHKD 669
G+ ++C G+ + + + C+ G W P C + C PG G+ +
Sbjct: 3116 GASISYSCVDGYQLSHSAILSCEGRG---VWKGEVPQCLPVFCGDPGTPAEGRLSGKS-- 3170
Query: 670 VFEYNEVVTYSCLSSTGPDEFSLVGESSLFCIGKDEWSSDPPEC 801
F + V C F LVG S C WS P C
Sbjct: 3171 -FTFKSEVFIQC-----KPPFVLVGSSRRTCQADGIWSGIQPTC 3208
Score = 67.4 bits (163), Expect = 2e-11
Identities = 45/166 (27%), Positives = 72/166 (43%), Gaps = 2/166 (1%)
Frame = +1
Query: 310 VEYECRPGFRPMVPALPTSSVCQDDNTWSPLQEACRRKACSNLPDPLNGQVSYPNGDTLF 489
V Y C G++ L T C + TW+ C +C + P L + + D F
Sbjct: 3001 VIYACWEGYK--TSGLMTRH-CTANGTWTGTAPDCTIISCGD-PGTLPNGIQFGT-DFTF 3055
Query: 490 GSKAQFTCNTGFYIIG--AETVYCQVSGNVMAWSEPSPLCEKILCKPPGEIPNGKYTNSH 663
+ CN G+ + + T+ C G W++ PLC+ +LC P +PNGK S
Sbjct: 3056 NKTVSYQCNPGYLMEPPTSPTIRCTKDGT---WNQSRPLCKAVLCNQPPPVPNGKVEGSD 3112
Query: 664 KDVFEYNEVVTYSCLSSTGPDEFSLVGESSLFCIGKDEWSSDPPEC 801
F + ++YSC+ D + L + L C G+ W + P+C
Sbjct: 3113 ---FRWGASISYSCV-----DGYQLSHSAILSCEGRGVWKGEVPQC 3150
Score = 65.9 bits (159), Expect = 5e-11
Identities = 47/176 (26%), Positives = 72/176 (40%), Gaps = 1/176 (0%)
Frame = +1
Query: 280 LNTTYRPGDRVEYECRPGFRPMVPALPTSSVCQDDNTWSPLQEACRRKACSNLPDPLNGQ 459
L ++ + + C G + A T C + +WS +Q C +C N P NG
Sbjct: 2932 LGDEFKTKSLLRFSCEMGHQLRGSAERT---CLVNGSWSGVQPVCEAVSCGNPGTPTNGM 2988
Query: 460 VSYPNGDTLFGSKAQFTCNTGFYIIGAETVYCQVSGNVMAWSEPSPLCEKILCKPPGEIP 639
+ +G LF S + C G+ G T +C +G W+ +P C I C PG +P
Sbjct: 2989 ILSSDG-ILFSSSVIYACWEGYKTSGLMTRHCTANG---TWTGTAPDCTIISCGDPGTLP 3044
Query: 640 NGKYTNSHKDVFEYNEVVTYSCLSSTGPDEFSLVGES-SLFCIGKDEWSSDPPECK 804
NG + F +N+ V+Y C P S ++ C W+ P CK
Sbjct: 3045 NGIQFGTD---FTFNKTVSYQC----NPGYLMEPPTSPTIRCTKDGTWNQSRPLCK 3093
Score = 61.2 bits (147), Expect = 1e-09
Identities = 45/172 (26%), Positives = 76/172 (44%), Gaps = 7/172 (4%)
Frame = +1
Query: 307 RVEYECRPGFRPMVPALPTSSVCQDDNTWSPLQE--ACRRKACSNLPDPLNGQVSY---P 471
+V YEC GF+ + + ++VCQ+D WS + C+ C ++ L+ V +
Sbjct: 2516 KVTYECNEGFK-LDASQEATTVCQEDGLWSNRGKPPTCKPVPCPSIEGQLSEHVLWRLVS 2574
Query: 472 NGDTLFGSKAQFTCNTGFYIIGAETVYCQVSGNVMAWS--EPSPLCEKILCKPPGEIPNG 645
+G++ +C+ G+++ G + CQ +G WS E P C+ I C PNG
Sbjct: 2575 GSLNEYGAQVLLSCSPGYFLQGQRLLQCQANG---TWSTEEDRPRCKVISCGSLSFPPNG 2631
Query: 646 KYTNSHKDVFEYNEVVTYSCLSSTGPDEFSLVGESSLFCIGKDEWSSDPPEC 801
N + Y ++C +TG ++LVG C+ WS C
Sbjct: 2632 ---NKIGTLTIYGATAIFTC--NTG---YTLVGSHVRECLANGLWSGSETRC 2675
Score = 59.7 bits (143), Expect = 4e-09
Identities = 45/146 (30%), Positives = 65/146 (44%), Gaps = 2/146 (1%)
Frame = +1
Query: 373 CQDDNTWSPLQEACRRKACSNLPDPL-NGQVSYPNGDTL-FGSKAQFTCNTGFYIIGAET 546
C + WS + C C + PDP+ NG +S GD + + CN GF ++G
Sbjct: 2662 CLANGLWSGSETRCLAGHCGS-PDPIVNGHIS---GDGFSYRDTVVYQCNPGFRLVGTSV 2717
Query: 547 VYCQVSGNVMAWSEPSPLCEKILCKPPGEIPNGKYTNSHKDVFEYNEVVTYSCLSSTGPD 726
C WS +P+C I C PG +G TN + F N++V ++C TG
Sbjct: 2718 RICLQDHK---WSGQTPVCVPITCGHPGNPAHG-LTNGTE--FNLNDLVNFTC--HTG-- 2767
Query: 727 EFSLVGESSLFCIGKDEWSSDPPECK 804
+ L G S C +WSS P C+
Sbjct: 2768 -YRLQGASRAQCRSNGQWSSPLPICR 2792
Score = 53.5 bits (127), Expect = 3e-07
Identities = 45/170 (26%), Positives = 64/170 (37%), Gaps = 8/170 (4%)
Frame = +1
Query: 319 ECRPGFRPMVPALPTSSVCQDDNTWSPLQEACRRKACSNLPDP-------LNGQVSYPNG 477
+C+P P V + CQ D WS +Q C A + PDP N Y G
Sbjct: 3180 QCKP---PFVLVGSSRRTCQADGIWSGIQPTCIDPAHTACPDPGTPHFGIQNSSKGYEVG 3236
Query: 478 DTLFGSKAQFTCNTGFYIIGAETVYCQVSGNVMAWSEPSPLCEKILCKPPGEIPNGKYTN 657
T+F F C G++I G+ T C + + WS C C+ P T
Sbjct: 3237 STVF-----FRCRKGYHIQGSTTRTCLAN---LTWSGIQTECIPHACRQP-------ETP 3281
Query: 658 SHKDVFEYN-EVVTYSCLSSTGPDEFSLVGESSLFCIGKDEWSSDPPECK 804
+H DV + Y+ + + P F G C +W+ P CK
Sbjct: 3282 AHADVRAIDLPAFGYTLVYTCHPGFFLAGGSEHRTCKADMKWTGKSPVCK 3331
Score = 49.3 bits (116), Expect = 5e-06
Identities = 48/180 (26%), Positives = 76/180 (42%), Gaps = 12/180 (6%)
Frame = +1
Query: 301 GDRVEYECRPGFRPMVPALPTSSVCQDDNT----WSPLQEACRRKACSNLPDPLNGQVSY 468
G +V Y C+PG+R + +++ C+ + W + C+ +C P NG S+
Sbjct: 2452 GSKVHYFCKPGYRMIG---HSNATCRRNPVGVYQWDSMAPLCQAVSCGIPEAPGNG--SF 2506
Query: 469 PNGDTLFGSKAQFTCNTGFYIIGAE--TVYCQVSGNVMAWSE--PSPLCEKILCKP-PGE 633
+ SK + CN GF + ++ T CQ G WS P C+ + C G+
Sbjct: 2507 TGNEFTLDSKVTYECNEGFKLDASQEATTVCQEDG---LWSNRGKPPTCKPVPCPSIEGQ 2563
Query: 634 I-PNGKYTNSHKDVFEYNEVVTYSCLSSTGPDEFSLVGESSLFCIGKDEWSS--DPPECK 804
+ + + + EY V SC S G + L G+ L C WS+ D P CK
Sbjct: 2564 LSEHVLWRLVSGSLNEYGAQVLLSC--SPG---YFLQGQRLLQCQANGTWSTEEDRPRCK 2618
Database: RefSeq49_MP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 15,617,559
Number of sequences in database: 30,036
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 30036
Number of Hits to DB: 38,285,539
Number of extensions: 1080805
Number of successful extensions: 3464
Number of sequences better than 1.0e-05: 27
Number of HSP's gapped: 3172
Number of HSP's successfully gapped: 110
Length of query: 350
Length of database: 15,617,559
Length adjustment: 102
Effective length of query: 248
Effective length of database: 12,553,887
Effective search space: 3113363976
Effective search space used: 3113363976
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)
Search to RefSeqHP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-014101
(1051 letters)
Database: RefSeq49_HP.fasta
32,964 sequences; 18,297,164 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_758860.1| membrane cofactor protein isoform 14 precursor ... 203 2e-52
Alignment gi|NP_758871.1| membrane cofactor protein isoform 12 precursor ... 203 2e-52
Alignment gi|NP_758863.1| membrane cofactor protein isoform 6 precursor [... 203 2e-52
Alignment gi|NP_758862.1| membrane cofactor protein isoform 5 precursor [... 203 2e-52
Alignment gi|NP_722548.1| membrane cofactor protein isoform 4 precursor [... 203 2e-52
Alignment gi|NP_758861.1| membrane cofactor protein isoform 3 precursor [... 203 2e-52
Alignment gi|NP_758869.1| membrane cofactor protein isoform 2 precursor [... 203 2e-52
Alignment gi|NP_002380.3| membrane cofactor protein isoform 1 precursor [... 203 2e-52
Alignment gi|NP_783641.1| complement component receptor 1-like protein pr... 160 2e-39
Alignment gi|NP_000642.3| complement receptor type 1 isoform S precursor ... 150 2e-36
>ref|NP_758860.1| membrane cofactor protein isoform 14 precursor [Homo sapiens].
Length = 349
Score = 203 bits (516), Expect = 2e-52
Identities = 104/227 (45%), Positives = 142/227 (62%), Gaps = 5/227 (2%)
Frame = +1
Query: 139 PCRPENPFSSRCFVEILWVSLALVFLLPMPSDACDEPPKFESM----RPQVLNTTYRPGD 306
P R E PF S F +L A+V LL SDAC+EPP FE+M +P+ Y G+
Sbjct: 4 PGRRECPFPSWRFPGLLLA--AMVLLLYSFSDACEEPPTFEAMELIGKPKPY---YEIGE 58
Query: 307 RVEYECRPGFRPMVPALPTSSVCQDDNTWSPLQE-ACRRKACSNLPDPLNGQVSYPNGDT 483
RV+Y+C+ G+ +P L T ++C ++TW P+ + AC R+ C + DPLNGQ NG
Sbjct: 59 RVDYKCKKGYF-YIPPLATHTICDRNHTWLPVSDDACYRETCPYIRDPLNGQAVPANGTY 117
Query: 484 LFGSKAQFTCNTGFYIIGAETVYCQVSGNVMAWSEPSPLCEKILCKPPGEIPNGKYTNSH 663
FG + F CN G+Y+IG E +YC++ G+V WS P+CEK+LC PP +I NGK+T S
Sbjct: 118 EFGYQMHFICNEGYYLIGEEILYCELKGSVAIWSGKPPICEKVLCTPPPKIKNGKHTFSE 177
Query: 664 KDVFEYNEVVTYSCLSSTGPDEFSLVGESSLFCIGKDEWSSDPPECK 804
+VFEY + VTYSC + GPD FSL+GES+++C WS PECK
Sbjct: 178 VEVFEYLDAVTYSCDPAPGPDPFSLIGESTIYCGDNSVWSRAAPECK 224
Score = 61.2 bits (147), Expect = 2e-09
Identities = 48/206 (23%), Positives = 82/206 (39%), Gaps = 11/206 (5%)
Frame = +1
Query: 217 LPMPSDACDE---PPKFESMRPQVL--NTTYRPGDRVEYECRPGFRPMVPALPTSSVCQD 381
LP+ DAC P + + Q + N TY G ++ + C G+ + + +
Sbjct: 87 LPVSDDACYRETCPYIRDPLNGQAVPANGTYEFGYQMHFICNEGYYLIGEEILYCELKGS 146
Query: 382 DNTWSPLQEACRRKACSNLPDPLNGQVSYPNGDTL-FGSKAQFTCNTG-----FYIIGAE 543
WS C + C+ P NG+ ++ + + ++C+ F +IG
Sbjct: 147 VAIWSGKPPICEKVLCTPPPKIKNGKHTFSEVEVFEYLDAVTYSCDPAPGPDPFSLIGES 206
Query: 544 TVYCQVSGNVMAWSEPSPLCEKILCKPPGEIPNGKYTNSHKDVFEYNEVVTYSCLSSTGP 723
T+YC G+ WS +P C+ + C+ P + NGK + F Y V + C
Sbjct: 207 TIYC---GDNSVWSRAAPECKVVKCRFP-VVENGKQISGFGKKFYYKATVMFEC-----D 257
Query: 724 DEFSLVGESSLFCIGKDEWSSDPPEC 801
F L G ++ C W P+C
Sbjct: 258 KGFYLDGSDTIVCDSNSTWDPPVPKC 283
Score = 48.9 bits (115), Expect = 8e-06
Identities = 36/128 (28%), Positives = 53/128 (41%), Gaps = 4/128 (3%)
Frame = +1
Query: 238 CDEPPKFESMRPQVLNT-TYRPGDRVEYECRPGFRPMVPALPTSSV--CQDDNTWSPLQE 408
C PPK ++ + + D V Y C P P +L S C D++ WS
Sbjct: 162 CTPPPKIKNGKHTFSEVEVFEYLDAVTYSCDPAPGPDPFSLIGESTIYCGDNSVWSRAAP 221
Query: 409 ACRRKACSNLPDPLNG-QVSYPNGDTLFGSKAQFTCNTGFYIIGAETVYCQVSGNVMAWS 585
C+ C P NG Q+S + + F C+ GFY+ G++T+ C + W
Sbjct: 222 ECKVVKC-RFPVVENGKQISGFGKKFYYKATVMFECDKGFYLDGSDTIVCDSNS---TWD 277
Query: 586 EPSPLCEK 609
P P C K
Sbjct: 278 PPVPKCLK 285
>ref|NP_758871.1| membrane cofactor protein isoform 12 precursor [Homo sapiens].
Length = 355
Score = 203 bits (516), Expect = 2e-52
Identities = 104/227 (45%), Positives = 142/227 (62%), Gaps = 5/227 (2%)
Frame = +1
Query: 139 PCRPENPFSSRCFVEILWVSLALVFLLPMPSDACDEPPKFESM----RPQVLNTTYRPGD 306
P R E PF S F +L A+V LL SDAC+EPP FE+M +P+ Y G+
Sbjct: 4 PGRRECPFPSWRFPGLLLA--AMVLLLYSFSDACEEPPTFEAMELIGKPKPY---YEIGE 58
Query: 307 RVEYECRPGFRPMVPALPTSSVCQDDNTWSPLQE-ACRRKACSNLPDPLNGQVSYPNGDT 483
RV+Y+C+ G+ +P L T ++C ++TW P+ + AC R+ C + DPLNGQ NG
Sbjct: 59 RVDYKCKKGYF-YIPPLATHTICDRNHTWLPVSDDACYRETCPYIRDPLNGQAVPANGTY 117
Query: 484 LFGSKAQFTCNTGFYIIGAETVYCQVSGNVMAWSEPSPLCEKILCKPPGEIPNGKYTNSH 663
FG + F CN G+Y+IG E +YC++ G+V WS P+CEK+LC PP +I NGK+T S
Sbjct: 118 EFGYQMHFICNEGYYLIGEEILYCELKGSVAIWSGKPPICEKVLCTPPPKIKNGKHTFSE 177
Query: 664 KDVFEYNEVVTYSCLSSTGPDEFSLVGESSLFCIGKDEWSSDPPECK 804
+VFEY + VTYSC + GPD FSL+GES+++C WS PECK
Sbjct: 178 VEVFEYLDAVTYSCDPAPGPDPFSLIGESTIYCGDNSVWSRAAPECK 224
Score = 61.2 bits (147), Expect = 2e-09
Identities = 48/206 (23%), Positives = 82/206 (39%), Gaps = 11/206 (5%)
Frame = +1
Query: 217 LPMPSDACDE---PPKFESMRPQVL--NTTYRPGDRVEYECRPGFRPMVPALPTSSVCQD 381
LP+ DAC P + + Q + N TY G ++ + C G+ + + +
Sbjct: 87 LPVSDDACYRETCPYIRDPLNGQAVPANGTYEFGYQMHFICNEGYYLIGEEILYCELKGS 146
Query: 382 DNTWSPLQEACRRKACSNLPDPLNGQVSYPNGDTL-FGSKAQFTCNTG-----FYIIGAE 543
WS C + C+ P NG+ ++ + + ++C+ F +IG
Sbjct: 147 VAIWSGKPPICEKVLCTPPPKIKNGKHTFSEVEVFEYLDAVTYSCDPAPGPDPFSLIGES 206
Query: 544 TVYCQVSGNVMAWSEPSPLCEKILCKPPGEIPNGKYTNSHKDVFEYNEVVTYSCLSSTGP 723
T+YC G+ WS +P C+ + C+ P + NGK + F Y V + C
Sbjct: 207 TIYC---GDNSVWSRAAPECKVVKCRFP-VVENGKQISGFGKKFYYKATVMFEC-----D 257
Query: 724 DEFSLVGESSLFCIGKDEWSSDPPEC 801
F L G ++ C W P+C
Sbjct: 258 KGFYLDGSDTIVCDSNSTWDPPVPKC 283
Score = 50.4 bits (119), Expect = 3e-06
Identities = 38/133 (28%), Positives = 55/133 (41%), Gaps = 4/133 (3%)
Frame = +1
Query: 238 CDEPPKFESMRPQVLNT-TYRPGDRVEYECRPGFRPMVPALPTSSV--CQDDNTWSPLQE 408
C PPK ++ + + D V Y C P P +L S C D++ WS
Sbjct: 162 CTPPPKIKNGKHTFSEVEVFEYLDAVTYSCDPAPGPDPFSLIGESTIYCGDNSVWSRAAP 221
Query: 409 ACRRKACSNLPDPLNG-QVSYPNGDTLFGSKAQFTCNTGFYIIGAETVYCQVSGNVMAWS 585
C+ C P NG Q+S + + F C+ GFY+ G++T+ C + W
Sbjct: 222 ECKVVKC-RFPVVENGKQISGFGKKFYYKATVMFECDKGFYLDGSDTIVCDSNS---TWD 277
Query: 586 EPSPLCEKILCKP 624
P P C K KP
Sbjct: 278 PPVPKCLKGYPKP 290
>ref|NP_758863.1| membrane cofactor protein isoform 6 precursor [Homo sapiens].
Length = 369
Score = 203 bits (516), Expect = 2e-52
Identities = 104/227 (45%), Positives = 142/227 (62%), Gaps = 5/227 (2%)
Frame = +1
Query: 139 PCRPENPFSSRCFVEILWVSLALVFLLPMPSDACDEPPKFESM----RPQVLNTTYRPGD 306
P R E PF S F +L A+V LL SDAC+EPP FE+M +P+ Y G+
Sbjct: 4 PGRRECPFPSWRFPGLLLA--AMVLLLYSFSDACEEPPTFEAMELIGKPKPY---YEIGE 58
Query: 307 RVEYECRPGFRPMVPALPTSSVCQDDNTWSPLQE-ACRRKACSNLPDPLNGQVSYPNGDT 483
RV+Y+C+ G+ +P L T ++C ++TW P+ + AC R+ C + DPLNGQ NG
Sbjct: 59 RVDYKCKKGYF-YIPPLATHTICDRNHTWLPVSDDACYRETCPYIRDPLNGQAVPANGTY 117
Query: 484 LFGSKAQFTCNTGFYIIGAETVYCQVSGNVMAWSEPSPLCEKILCKPPGEIPNGKYTNSH 663
FG + F CN G+Y+IG E +YC++ G+V WS P+CEK+LC PP +I NGK+T S
Sbjct: 118 EFGYQMHFICNEGYYLIGEEILYCELKGSVAIWSGKPPICEKVLCTPPPKIKNGKHTFSE 177
Query: 664 KDVFEYNEVVTYSCLSSTGPDEFSLVGESSLFCIGKDEWSSDPPECK 804
+VFEY + VTYSC + GPD FSL+GES+++C WS PECK
Sbjct: 178 VEVFEYLDAVTYSCDPAPGPDPFSLIGESTIYCGDNSVWSRAAPECK 224
Score = 61.2 bits (147), Expect = 2e-09
Identities = 48/206 (23%), Positives = 82/206 (39%), Gaps = 11/206 (5%)
Frame = +1
Query: 217 LPMPSDACDE---PPKFESMRPQVL--NTTYRPGDRVEYECRPGFRPMVPALPTSSVCQD 381
LP+ DAC P + + Q + N TY G ++ + C G+ + + +
Sbjct: 87 LPVSDDACYRETCPYIRDPLNGQAVPANGTYEFGYQMHFICNEGYYLIGEEILYCELKGS 146
Query: 382 DNTWSPLQEACRRKACSNLPDPLNGQVSYPNGDTL-FGSKAQFTCNTG-----FYIIGAE 543
WS C + C+ P NG+ ++ + + ++C+ F +IG
Sbjct: 147 VAIWSGKPPICEKVLCTPPPKIKNGKHTFSEVEVFEYLDAVTYSCDPAPGPDPFSLIGES 206
Query: 544 TVYCQVSGNVMAWSEPSPLCEKILCKPPGEIPNGKYTNSHKDVFEYNEVVTYSCLSSTGP 723
T+YC G+ WS +P C+ + C+ P + NGK + F Y V + C
Sbjct: 207 TIYC---GDNSVWSRAAPECKVVKCRFP-VVENGKQISGFGKKFYYKATVMFEC-----D 257
Query: 724 DEFSLVGESSLFCIGKDEWSSDPPEC 801
F L G ++ C W P+C
Sbjct: 258 KGFYLDGSDTIVCDSNSTWDPPVPKC 283
Score = 48.9 bits (115), Expect = 8e-06
Identities = 36/128 (28%), Positives = 53/128 (41%), Gaps = 4/128 (3%)
Frame = +1
Query: 238 CDEPPKFESMRPQVLNT-TYRPGDRVEYECRPGFRPMVPALPTSSV--CQDDNTWSPLQE 408
C PPK ++ + + D V Y C P P +L S C D++ WS
Sbjct: 162 CTPPPKIKNGKHTFSEVEVFEYLDAVTYSCDPAPGPDPFSLIGESTIYCGDNSVWSRAAP 221
Query: 409 ACRRKACSNLPDPLNG-QVSYPNGDTLFGSKAQFTCNTGFYIIGAETVYCQVSGNVMAWS 585
C+ C P NG Q+S + + F C+ GFY+ G++T+ C + W
Sbjct: 222 ECKVVKC-RFPVVENGKQISGFGKKFYYKATVMFECDKGFYLDGSDTIVCDSNS---TWD 277
Query: 586 EPSPLCEK 609
P P C K
Sbjct: 278 PPVPKCLK 285
>ref|NP_758862.1| membrane cofactor protein isoform 5 precursor [Homo sapiens].
Length = 362
Score = 203 bits (516), Expect = 2e-52
Identities = 104/227 (45%), Positives = 142/227 (62%), Gaps = 5/227 (2%)
Frame = +1
Query: 139 PCRPENPFSSRCFVEILWVSLALVFLLPMPSDACDEPPKFESM----RPQVLNTTYRPGD 306
P R E PF S F +L A+V LL SDAC+EPP FE+M +P+ Y G+
Sbjct: 4 PGRRECPFPSWRFPGLLLA--AMVLLLYSFSDACEEPPTFEAMELIGKPKPY---YEIGE 58
Query: 307 RVEYECRPGFRPMVPALPTSSVCQDDNTWSPLQE-ACRRKACSNLPDPLNGQVSYPNGDT 483
RV+Y+C+ G+ +P L T ++C ++TW P+ + AC R+ C + DPLNGQ NG
Sbjct: 59 RVDYKCKKGYF-YIPPLATHTICDRNHTWLPVSDDACYRETCPYIRDPLNGQAVPANGTY 117
Query: 484 LFGSKAQFTCNTGFYIIGAETVYCQVSGNVMAWSEPSPLCEKILCKPPGEIPNGKYTNSH 663
FG + F CN G+Y+IG E +YC++ G+V WS P+CEK+LC PP +I NGK+T S
Sbjct: 118 EFGYQMHFICNEGYYLIGEEILYCELKGSVAIWSGKPPICEKVLCTPPPKIKNGKHTFSE 177
Query: 664 KDVFEYNEVVTYSCLSSTGPDEFSLVGESSLFCIGKDEWSSDPPECK 804
+VFEY + VTYSC + GPD FSL+GES+++C WS PECK
Sbjct: 178 VEVFEYLDAVTYSCDPAPGPDPFSLIGESTIYCGDNSVWSRAAPECK 224
Score = 61.2 bits (147), Expect = 2e-09
Identities = 48/206 (23%), Positives = 82/206 (39%), Gaps = 11/206 (5%)
Frame = +1
Query: 217 LPMPSDACDE---PPKFESMRPQVL--NTTYRPGDRVEYECRPGFRPMVPALPTSSVCQD 381
LP+ DAC P + + Q + N TY G ++ + C G+ + + +
Sbjct: 87 LPVSDDACYRETCPYIRDPLNGQAVPANGTYEFGYQMHFICNEGYYLIGEEILYCELKGS 146
Query: 382 DNTWSPLQEACRRKACSNLPDPLNGQVSYPNGDTL-FGSKAQFTCNTG-----FYIIGAE 543
WS C + C+ P NG+ ++ + + ++C+ F +IG
Sbjct: 147 VAIWSGKPPICEKVLCTPPPKIKNGKHTFSEVEVFEYLDAVTYSCDPAPGPDPFSLIGES 206
Query: 544 TVYCQVSGNVMAWSEPSPLCEKILCKPPGEIPNGKYTNSHKDVFEYNEVVTYSCLSSTGP 723
T+YC G+ WS +P C+ + C+ P + NGK + F Y V + C
Sbjct: 207 TIYC---GDNSVWSRAAPECKVVKCRFP-VVENGKQISGFGKKFYYKATVMFEC-----D 257
Query: 724 DEFSLVGESSLFCIGKDEWSSDPPEC 801
F L G ++ C W P+C
Sbjct: 258 KGFYLDGSDTIVCDSNSTWDPPVPKC 283
Score = 48.9 bits (115), Expect = 8e-06
Identities = 36/128 (28%), Positives = 53/128 (41%), Gaps = 4/128 (3%)
Frame = +1
Query: 238 CDEPPKFESMRPQVLNT-TYRPGDRVEYECRPGFRPMVPALPTSSV--CQDDNTWSPLQE 408
C PPK ++ + + D V Y C P P +L S C D++ WS
Sbjct: 162 CTPPPKIKNGKHTFSEVEVFEYLDAVTYSCDPAPGPDPFSLIGESTIYCGDNSVWSRAAP 221
Query: 409 ACRRKACSNLPDPLNG-QVSYPNGDTLFGSKAQFTCNTGFYIIGAETVYCQVSGNVMAWS 585
C+ C P NG Q+S + + F C+ GFY+ G++T+ C + W
Sbjct: 222 ECKVVKC-RFPVVENGKQISGFGKKFYYKATVMFECDKGFYLDGSDTIVCDSNS---TWD 277
Query: 586 EPSPLCEK 609
P P C K
Sbjct: 278 PPVPKCLK 285
>ref|NP_722548.1| membrane cofactor protein isoform 4 precursor [Homo sapiens].
Length = 384
Score = 203 bits (516), Expect = 2e-52
Identities = 104/227 (45%), Positives = 142/227 (62%), Gaps = 5/227 (2%)
Frame = +1
Query: 139 PCRPENPFSSRCFVEILWVSLALVFLLPMPSDACDEPPKFESM----RPQVLNTTYRPGD 306
P R E PF S F +L A+V LL SDAC+EPP FE+M +P+ Y G+
Sbjct: 4 PGRRECPFPSWRFPGLLLA--AMVLLLYSFSDACEEPPTFEAMELIGKPKPY---YEIGE 58
Query: 307 RVEYECRPGFRPMVPALPTSSVCQDDNTWSPLQE-ACRRKACSNLPDPLNGQVSYPNGDT 483
RV+Y+C+ G+ +P L T ++C ++TW P+ + AC R+ C + DPLNGQ NG
Sbjct: 59 RVDYKCKKGYF-YIPPLATHTICDRNHTWLPVSDDACYRETCPYIRDPLNGQAVPANGTY 117
Query: 484 LFGSKAQFTCNTGFYIIGAETVYCQVSGNVMAWSEPSPLCEKILCKPPGEIPNGKYTNSH 663
FG + F CN G+Y+IG E +YC++ G+V WS P+CEK+LC PP +I NGK+T S
Sbjct: 118 EFGYQMHFICNEGYYLIGEEILYCELKGSVAIWSGKPPICEKVLCTPPPKIKNGKHTFSE 177
Query: 664 KDVFEYNEVVTYSCLSSTGPDEFSLVGESSLFCIGKDEWSSDPPECK 804
+VFEY + VTYSC + GPD FSL+GES+++C WS PECK
Sbjct: 178 VEVFEYLDAVTYSCDPAPGPDPFSLIGESTIYCGDNSVWSRAAPECK 224
Score = 63.9 bits (154), Expect = 2e-10
Identities = 54/216 (25%), Positives = 89/216 (41%), Gaps = 11/216 (5%)
Frame = +1
Query: 217 LPMPSDACDE---PPKFESMRPQVL--NTTYRPGDRVEYECRPGFRPMVPALPTSSVCQD 381
LP+ DAC P + + Q + N TY G ++ + C G+ + + +
Sbjct: 87 LPVSDDACYRETCPYIRDPLNGQAVPANGTYEFGYQMHFICNEGYYLIGEEILYCELKGS 146
Query: 382 DNTWSPLQEACRRKACSNLPDPLNGQVSYPNGDTL-FGSKAQFTCNTG-----FYIIGAE 543
WS C + C+ P NG+ ++ + + ++C+ F +IG
Sbjct: 147 VAIWSGKPPICEKVLCTPPPKIKNGKHTFSEVEVFEYLDAVTYSCDPAPGPDPFSLIGES 206
Query: 544 TVYCQVSGNVMAWSEPSPLCEKILCKPPGEIPNGKYTNSHKDVFEYNEVVTYSCLSSTGP 723
T+YC G+ WS +P C+ + C+ P + NGK + F Y V + C
Sbjct: 207 TIYC---GDNSVWSRAAPECKVVKCRFP-VVENGKQISGFGKKFYYKATVMFEC-----D 257
Query: 724 DEFSLVGESSLFCIGKDEWSSDPPECKGSQMSISST 831
F L G ++ C W DPP K ++S SST
Sbjct: 258 KGFYLDGSDTIVCDSNSTW--DPPVPKCLKVSTSST 291
>ref|NP_758861.1| membrane cofactor protein isoform 3 precursor [Homo sapiens].
Length = 377
Score = 203 bits (516), Expect = 2e-52
Identities = 104/227 (45%), Positives = 142/227 (62%), Gaps = 5/227 (2%)
Frame = +1
Query: 139 PCRPENPFSSRCFVEILWVSLALVFLLPMPSDACDEPPKFESM----RPQVLNTTYRPGD 306
P R E PF S F +L A+V LL SDAC+EPP FE+M +P+ Y G+
Sbjct: 4 PGRRECPFPSWRFPGLLLA--AMVLLLYSFSDACEEPPTFEAMELIGKPKPY---YEIGE 58
Query: 307 RVEYECRPGFRPMVPALPTSSVCQDDNTWSPLQE-ACRRKACSNLPDPLNGQVSYPNGDT 483
RV+Y+C+ G+ +P L T ++C ++TW P+ + AC R+ C + DPLNGQ NG
Sbjct: 59 RVDYKCKKGYF-YIPPLATHTICDRNHTWLPVSDDACYRETCPYIRDPLNGQAVPANGTY 117
Query: 484 LFGSKAQFTCNTGFYIIGAETVYCQVSGNVMAWSEPSPLCEKILCKPPGEIPNGKYTNSH 663
FG + F CN G+Y+IG E +YC++ G+V WS P+CEK+LC PP +I NGK+T S
Sbjct: 118 EFGYQMHFICNEGYYLIGEEILYCELKGSVAIWSGKPPICEKVLCTPPPKIKNGKHTFSE 177
Query: 664 KDVFEYNEVVTYSCLSSTGPDEFSLVGESSLFCIGKDEWSSDPPECK 804
+VFEY + VTYSC + GPD FSL+GES+++C WS PECK
Sbjct: 178 VEVFEYLDAVTYSCDPAPGPDPFSLIGESTIYCGDNSVWSRAAPECK 224
Score = 63.9 bits (154), Expect = 2e-10
Identities = 54/216 (25%), Positives = 89/216 (41%), Gaps = 11/216 (5%)
Frame = +1
Query: 217 LPMPSDACDE---PPKFESMRPQVL--NTTYRPGDRVEYECRPGFRPMVPALPTSSVCQD 381
LP+ DAC P + + Q + N TY G ++ + C G+ + + +
Sbjct: 87 LPVSDDACYRETCPYIRDPLNGQAVPANGTYEFGYQMHFICNEGYYLIGEEILYCELKGS 146
Query: 382 DNTWSPLQEACRRKACSNLPDPLNGQVSYPNGDTL-FGSKAQFTCNTG-----FYIIGAE 543
WS C + C+ P NG+ ++ + + ++C+ F +IG
Sbjct: 147 VAIWSGKPPICEKVLCTPPPKIKNGKHTFSEVEVFEYLDAVTYSCDPAPGPDPFSLIGES 206
Query: 544 TVYCQVSGNVMAWSEPSPLCEKILCKPPGEIPNGKYTNSHKDVFEYNEVVTYSCLSSTGP 723
T+YC G+ WS +P C+ + C+ P + NGK + F Y V + C
Sbjct: 207 TIYC---GDNSVWSRAAPECKVVKCRFP-VVENGKQISGFGKKFYYKATVMFEC-----D 257
Query: 724 DEFSLVGESSLFCIGKDEWSSDPPECKGSQMSISST 831
F L G ++ C W DPP K ++S SST
Sbjct: 258 KGFYLDGSDTIVCDSNSTW--DPPVPKCLKVSTSST 291
>ref|NP_758869.1| membrane cofactor protein isoform 2 precursor [Homo sapiens].
Length = 399
Score = 203 bits (516), Expect = 2e-52
Identities = 104/227 (45%), Positives = 142/227 (62%), Gaps = 5/227 (2%)
Frame = +1
Query: 139 PCRPENPFSSRCFVEILWVSLALVFLLPMPSDACDEPPKFESM----RPQVLNTTYRPGD 306
P R E PF S F +L A+V LL SDAC+EPP FE+M +P+ Y G+
Sbjct: 4 PGRRECPFPSWRFPGLLLA--AMVLLLYSFSDACEEPPTFEAMELIGKPKPY---YEIGE 58
Query: 307 RVEYECRPGFRPMVPALPTSSVCQDDNTWSPLQE-ACRRKACSNLPDPLNGQVSYPNGDT 483
RV+Y+C+ G+ +P L T ++C ++TW P+ + AC R+ C + DPLNGQ NG
Sbjct: 59 RVDYKCKKGYF-YIPPLATHTICDRNHTWLPVSDDACYRETCPYIRDPLNGQAVPANGTY 117
Query: 484 LFGSKAQFTCNTGFYIIGAETVYCQVSGNVMAWSEPSPLCEKILCKPPGEIPNGKYTNSH 663
FG + F CN G+Y+IG E +YC++ G+V WS P+CEK+LC PP +I NGK+T S
Sbjct: 118 EFGYQMHFICNEGYYLIGEEILYCELKGSVAIWSGKPPICEKVLCTPPPKIKNGKHTFSE 177
Query: 664 KDVFEYNEVVTYSCLSSTGPDEFSLVGESSLFCIGKDEWSSDPPECK 804
+VFEY + VTYSC + GPD FSL+GES+++C WS PECK
Sbjct: 178 VEVFEYLDAVTYSCDPAPGPDPFSLIGESTIYCGDNSVWSRAAPECK 224
Score = 52.8 bits (125), Expect = 5e-07
Identities = 40/138 (28%), Positives = 58/138 (42%), Gaps = 8/138 (5%)
Frame = +1
Query: 238 CDEPPKFESMRPQVLNT-TYRPGDRVEYECRPGFRPMVPALPTSSV--CQDDNTWSPLQE 408
C PPK ++ + + D V Y C P P +L S C D++ WS
Sbjct: 162 CTPPPKIKNGKHTFSEVEVFEYLDAVTYSCDPAPGPDPFSLIGESTIYCGDNSVWSRAAP 221
Query: 409 ACRRKACSNLPDPLNG-QVSYPNGDTLFGSKAQFTCNTGFYIIGAETVYCQVSGNVMAWS 585
C+ C P NG Q+S + + F C+ GFY+ G++T+ C + W
Sbjct: 222 ECKVVKC-RFPVVENGKQISGFGKKFYYKATVMFECDKGFYLDGSDTIVCDSNS---TWD 277
Query: 586 EPSPLCEKIL----CKPP 627
P P C K+L KPP
Sbjct: 278 PPVPKCLKVLPPSSTKPP 295
>ref|NP_002380.3| membrane cofactor protein isoform 1 precursor [Homo sapiens].
Length = 392
Score = 203 bits (516), Expect = 2e-52
Identities = 104/227 (45%), Positives = 142/227 (62%), Gaps = 5/227 (2%)
Frame = +1
Query: 139 PCRPENPFSSRCFVEILWVSLALVFLLPMPSDACDEPPKFESM----RPQVLNTTYRPGD 306
P R E PF S F +L A+V LL SDAC+EPP FE+M +P+ Y G+
Sbjct: 4 PGRRECPFPSWRFPGLLLA--AMVLLLYSFSDACEEPPTFEAMELIGKPKPY---YEIGE 58
Query: 307 RVEYECRPGFRPMVPALPTSSVCQDDNTWSPLQE-ACRRKACSNLPDPLNGQVSYPNGDT 483
RV+Y+C+ G+ +P L T ++C ++TW P+ + AC R+ C + DPLNGQ NG
Sbjct: 59 RVDYKCKKGYF-YIPPLATHTICDRNHTWLPVSDDACYRETCPYIRDPLNGQAVPANGTY 117
Query: 484 LFGSKAQFTCNTGFYIIGAETVYCQVSGNVMAWSEPSPLCEKILCKPPGEIPNGKYTNSH 663
FG + F CN G+Y+IG E +YC++ G+V WS P+CEK+LC PP +I NGK+T S
Sbjct: 118 EFGYQMHFICNEGYYLIGEEILYCELKGSVAIWSGKPPICEKVLCTPPPKIKNGKHTFSE 177
Query: 664 KDVFEYNEVVTYSCLSSTGPDEFSLVGESSLFCIGKDEWSSDPPECK 804
+VFEY + VTYSC + GPD FSL+GES+++C WS PECK
Sbjct: 178 VEVFEYLDAVTYSCDPAPGPDPFSLIGESTIYCGDNSVWSRAAPECK 224
Score = 52.8 bits (125), Expect = 5e-07
Identities = 40/138 (28%), Positives = 58/138 (42%), Gaps = 8/138 (5%)
Frame = +1
Query: 238 CDEPPKFESMRPQVLNT-TYRPGDRVEYECRPGFRPMVPALPTSSV--CQDDNTWSPLQE 408
C PPK ++ + + D V Y C P P +L S C D++ WS
Sbjct: 162 CTPPPKIKNGKHTFSEVEVFEYLDAVTYSCDPAPGPDPFSLIGESTIYCGDNSVWSRAAP 221
Query: 409 ACRRKACSNLPDPLNG-QVSYPNGDTLFGSKAQFTCNTGFYIIGAETVYCQVSGNVMAWS 585
C+ C P NG Q+S + + F C+ GFY+ G++T+ C + W
Sbjct: 222 ECKVVKC-RFPVVENGKQISGFGKKFYYKATVMFECDKGFYLDGSDTIVCDSNS---TWD 277
Query: 586 EPSPLCEKIL----CKPP 627
P P C K+L KPP
Sbjct: 278 PPVPKCLKVLPPSSTKPP 295
>ref|NP_783641.1| complement component receptor 1-like protein precursor [Homo
sapiens].
Length = 569
Score = 160 bits (404), Expect = 2e-39
Identities = 87/230 (37%), Positives = 127/230 (55%), Gaps = 7/230 (3%)
Frame = +1
Query: 133 ALPCRPENPFSSRCFVEILWVSLALVFLLPMPSDACDEPPKFESMRPQVLNTTYR--PGD 306
A P R E PF SR F +L ALV LL SD C+ P RP L + G
Sbjct: 2 APPVRLERPFPSRRFPGLLLA--ALVLLLSSFSDQCNVPEWLPFARPTNLTDDFEFPIGT 59
Query: 307 RVEYECRPGFRPMVPALPTSSVCQDDNTWSPLQEACRRKACSNLPDPLNGQVSYPNGDTL 486
+ YECRPG+ P S +C ++ W+ ++ C+RK+C N PDP+NG +++ D
Sbjct: 60 YLNYECRPGYS----GRPFSIICLKNSVWTSAKDKCKRKSCRNPPDPVNG-MAHVIKDIQ 114
Query: 487 FGSKAQFTCNTGFYIIGAETVYCQVSGNVMAWSEPSPLCEKILCKPPGEIPNGKYTNSHK 666
F S+ +++C G+ +IG+ + C +SGN + W +P+C++I+C P I NG +T+ +
Sbjct: 115 FRSQIKYSCPKGYRLIGSSSATCIISGNTVIWDNKTPVCDRIICGLPPTIANGDFTSISR 174
Query: 667 DVFEYNEVVTYSC-LSSTGPDEFSLVGESSLFCIGKDE----WSSDPPEC 801
+ F Y VVTY C L S G F LVGE S++C KD+ WS P+C
Sbjct: 175 EYFHYGSVVTYHCNLGSRGKKVFELVGEPSIYCTSKDDQVGIWSGPAPQC 224
Score = 96.7 bits (239), Expect = 3e-20
Identities = 55/175 (31%), Positives = 86/175 (49%), Gaps = 7/175 (4%)
Frame = +1
Query: 301 GDRVEYECRPGFRPMVPALPTSSVCQDDNTWSPLQEACRRKACSNLPDPLNGQVSYPNGD 480
G +V++ C GF+ + + ++ W+ C RK+C P P+NG V D
Sbjct: 371 GAKVDFVCDEGFQLKGSSASYCVLAGMESLWNSSVPVCERKSCETPPVPVNGMVHVIT-D 429
Query: 481 TLFGSKAQFTCNTGFYIIGAETVYCQVSGNVMAWSEPSPLCEKILCKPPGEIPNGKYTNS 660
GS+ ++C TG +IG + C +SGN WS P+C++I C P I NG++T +
Sbjct: 430 IHVGSRINYSCTTGHRLIGHSSAECILSGNTAHWSMKPPICQQIFCPNPPAILNGRHTGT 489
Query: 661 HKDVFEYNEVVTYSCLSSTGPDE---FSLVGESSLFCI----GKDEWSSDPPECK 804
Y + V+Y+C PD F+L+GES++ G WSS P C+
Sbjct: 490 PLGDIPYGKEVSYTC--DPHPDRGMTFNLIGESTIRRTSEPHGNGVWSSPAPRCE 542
Score = 87.8 bits (216), Expect = 2e-17
Identities = 65/206 (31%), Positives = 87/206 (42%), Gaps = 10/206 (4%)
Frame = +1
Query: 217 LPMPSDACDEPPK-FESMRPQVLNTTYRPGDRVEYECRPGFRPMVPALPTSSVCQDDNTW 393
LP S C PP + R Q + PG V Y C PG+ T C W
Sbjct: 282 LPSCSRVCQPPPDVLHAERTQRDKDNFSPGQEVFYSCEPGYDLRG---STYLHCTPQGDW 338
Query: 394 SPLQEACRRKACSNLPDPLNGQVSYPNGDTLF------GSKAQFTCNTGFYIIGAETVYC 555
SP C K+C D GQ+ PNG LF G+K F C+ GF + G+ YC
Sbjct: 339 SPAAPRCEVKSC----DDFLGQL--PNGHVLFPLNLQLGAKVDFVCDEGFQLKGSSASYC 392
Query: 556 QVSGNVMAWSEPSPLCEKILCKPPGEIPNGKYTNSHKDVFEYNEVVTYSCLSSTGPDEFS 735
++G W+ P+CE+ C+ P +P + D+ + YSC +TG
Sbjct: 393 VLAGMESLWNSSVPVCERKSCETP-PVPVNGMVHVITDI-HVGSRINYSC--TTG---HR 445
Query: 736 LVGESSLFCI---GKDEWSSDPPECK 804
L+G SS CI WS PP C+
Sbjct: 446 LIGHSSAECILSGNTAHWSMKPPICQ 471
Score = 55.1 bits (131), Expect = 1e-07
Identities = 45/176 (25%), Positives = 65/176 (36%), Gaps = 8/176 (4%)
Frame = +1
Query: 301 GDRVEYECRPGFRPMV-------PALPTSSVCQDDNTWSPLQEACRRKACSNLPDPLNGQ 459
G V Y C G R P++ +S WS C P+ NG
Sbjct: 180 GSVVTYHCNLGSRGKKVFELVGEPSIYCTSKDDQVGIWSGPAPQCIIPNKCTPPNVENGI 239
Query: 460 VSYPNGDTL-FGSKAQFTCNTGFYIIGAETVYCQVSGNVMAWSEPSPLCEKILCKPPGEI 636
+ N +F C GF + G V CQ W P C ++ C+PP ++
Sbjct: 240 LVSDNRSLFSLNEVVEFRCQPGFGMKGPSHVKCQALNK---WEPELPSCSRV-CQPPPDV 295
Query: 637 PNGKYTNSHKDVFEYNEVVTYSCLSSTGPDEFSLVGESSLFCIGKDEWSSDPPECK 804
+ + T KD F + V YSC + L G + L C + +WS P C+
Sbjct: 296 LHAERTQRDKDNFSPGQEVFYSC-----EPGYDLRGSTYLHCTPQGDWSPAAPRCE 346
>ref|NP_000642.3| complement receptor type 1 isoform S precursor [Homo sapiens].
Length = 2489
Score = 150 bits (378), Expect = 2e-36
Identities = 83/214 (38%), Positives = 120/214 (56%), Gaps = 9/214 (4%)
Frame = +1
Query: 187 LWVSLALVFLLPMPSDACDEPPKFESMRPQV-LNTTYRP-GDRVEYECRPGFRPMVPALP 360
+W S A L + + C P +F P + +N P G + YECRPG+ + ++
Sbjct: 1829 VWSSPAPRCELSVRAGHCKTPEQFPFASPTIPINDFEFPVGTSLNYECRPGYFGKMFSIS 1888
Query: 361 TSSVCQDDNTWSPLQEACRRKACSNLPDPLNGQVSYPNGDTLFGSKAQFTCNTGFYIIGA 540
C ++ WS +++ CRRK+C P+P NG V + N DT FGS ++CN GF +IG+
Sbjct: 1889 ----CLENLVWSSVEDNCRRKSCGPPPEPFNGMV-HINTDTQFGSTVNYSCNEGFRLIGS 1943
Query: 541 ETVYCQVSGNVMAWSEPSPLCEKILCKPPGEIPNGKYTNSHKDVFEYNEVVTYSCLSSTG 720
+ C VSGN + W + +P+CE I C+PP I NG + ++++ F VVTY C TG
Sbjct: 1944 PSTTCLVSGNNVTWDKKAPICEIISCEPPPTISNGDFYSNNRTSFHNGTVVTYQC--HTG 2001
Query: 721 PDE---FSLVGESSLFCIGKDE----WSSDPPEC 801
PD F LVGE S++C KD+ WSS PP C
Sbjct: 2002 PDGEQLFELVGERSIYCTSKDDQVGVWSSPPPRC 2035
Score = 141 bits (356), Expect = 9e-34
Identities = 75/210 (35%), Positives = 114/210 (54%), Gaps = 9/210 (4%)
Frame = +1
Query: 199 LALVFLLPMPS--DACDEPPKFESMRPQVLNTTYR--PGDRVEYECRPGFRPMVPALPTS 366
LA+V LL +P C+ P RP L + G + YECRPG+ P S
Sbjct: 28 LAVVVLLALPVAWGQCNAPEWLPFARPTNLTDEFEFPIGTYLNYECRPGYS----GRPFS 83
Query: 367 SVCQDDNTWSPLQEACRRKACSNLPDPLNGQVSYPNGDTLFGSKAQFTCNTGFYIIGAET 546
+C ++ W+ ++ CRRK+C N PDP+NG V G FGS+ +++C G+ +IG+ +
Sbjct: 84 IICLKNSVWTGAKDRCRRKSCRNPPDPVNGMVHVIKG-IQFGSQIKYSCTKGYRLIGSSS 142
Query: 547 VYCQVSGNVMAWSEPSPLCEKILCKPPGEIPNGKYTNSHKDVFEYNEVVTYSC-LSSTGP 723
C +SG+ + W +P+C++I C P I NG + +++++ F Y VVTY C S G
Sbjct: 143 ATCIISGDTVIWDNETPICDRIPCGLPPTITNGDFISTNRENFHYGSVVTYRCNPGSGGR 202
Query: 724 DEFSLVGESSLFCIGKDE----WSSDPPEC 801
F LVGE S++C D+ WS P+C
Sbjct: 203 KVFELVGEPSIYCTSNDDQVGIWSGPAPQC 232
Score = 133 bits (335), Expect = 2e-31
Identities = 68/187 (36%), Positives = 100/187 (53%), Gaps = 5/187 (2%)
Frame = +1
Query: 256 FESMRPQVLNTTYRPGDRVEYECRPGFRPMVPALPTSSVCQDDNTWSPLQEACRRKACSN 435
F ++ Q + + G ++YECRP + P S C D+ WS ++ C+RK+C
Sbjct: 1401 FAKLKTQTNASDFPIGTSLKYECRPEYY----GRPFSITCLDNLVWSSPKDVCKRKSCKT 1456
Query: 436 LPDPLNGQVSYPNGDTLFGSKAQFTCNTGFYIIGAETVYCQVSGNVMAWSEPSPLCEKIL 615
PDP+NG V D GS+ ++C TG +IG + C +SGN WS P+C++I
Sbjct: 1457 PPDPVNGMVHVIT-DIQVGSRINYSCTTGHRLIGHSSAECILSGNTAHWSTKPPICQRIP 1515
Query: 616 CKPPGEIPNGKYTNSHKDVFEYNEVVTYSC-LSSTGPDEFSLVGESSLFCIGKDE----W 780
C P I NG + +++++ F Y VVTY C L S G F LVGE S++C D+ W
Sbjct: 1516 CGLPPTIANGDFISTNRENFHYGSVVTYRCNLGSRGRKVFELVGEPSIYCTSNDDQVGIW 1575
Query: 781 SSDPPEC 801
S P+C
Sbjct: 1576 SGPAPQC 1582
Score = 130 bits (327), Expect = 2e-30
Identities = 67/187 (35%), Positives = 99/187 (52%), Gaps = 5/187 (2%)
Frame = +1
Query: 256 FESMRPQVLNTTYRPGDRVEYECRPGFRPMVPALPTSSVCQDDNTWSPLQEACRRKACSN 435
F ++ Q + + G ++YECRP + P S C D+ WS ++ C+RK+C
Sbjct: 501 FAKLKTQTNASDFPIGTSLKYECRPEYY----GRPFSITCLDNLVWSSPKDVCKRKSCKT 556
Query: 436 LPDPLNGQVSYPNGDTLFGSKAQFTCNTGFYIIGAETVYCQVSGNVMAWSEPSPLCEKIL 615
PDP+NG V D GS+ ++C TG +IG + C +SGN WS P+C++I
Sbjct: 557 PPDPVNGMVHVIT-DIQVGSRINYSCTTGHRLIGHSSAECILSGNAAHWSTKPPICQRIP 615
Query: 616 CKPPGEIPNGKYTNSHKDVFEYNEVVTYSC-LSSTGPDEFSLVGESSLFCIGKDE----W 780
C P I NG + +++++ F Y VVTY C S G F LVGE S++C D+ W
Sbjct: 616 CGLPPTIANGDFISTNRENFHYGSVVTYRCNPGSGGRKVFELVGEPSIYCTSNDDQVGIW 675
Query: 781 SSDPPEC 801
S P+C
Sbjct: 676 SGPAPQC 682
Score = 130 bits (327), Expect = 2e-30
Identities = 67/187 (35%), Positives = 99/187 (52%), Gaps = 5/187 (2%)
Frame = +1
Query: 256 FESMRPQVLNTTYRPGDRVEYECRPGFRPMVPALPTSSVCQDDNTWSPLQEACRRKACSN 435
F ++ Q + + G ++YECRP + P S C D+ WS ++ C+RK+C
Sbjct: 951 FAKLKTQTNASDFPIGTSLKYECRPEYY----GRPFSITCLDNLVWSSPKDVCKRKSCKT 1006
Query: 436 LPDPLNGQVSYPNGDTLFGSKAQFTCNTGFYIIGAETVYCQVSGNVMAWSEPSPLCEKIL 615
PDP+NG V D GS+ ++C TG +IG + C +SGN WS P+C++I
Sbjct: 1007 PPDPVNGMVHVIT-DIQVGSRINYSCTTGHRLIGHSSAECILSGNAAHWSTKPPICQRIP 1065
Query: 616 CKPPGEIPNGKYTNSHKDVFEYNEVVTYSC-LSSTGPDEFSLVGESSLFCIGKDE----W 780
C P I NG + +++++ F Y VVTY C S G F LVGE S++C D+ W
Sbjct: 1066 CGLPPTIANGDFISTNRENFHYGSVVTYRCNPGSGGRKVFELVGEPSIYCTSNDDQVGIW 1125
Query: 781 SSDPPEC 801
S P+C
Sbjct: 1126 SGPAPQC 1132
Score = 119 bits (299), Expect = 4e-27
Identities = 71/204 (34%), Positives = 97/204 (47%), Gaps = 9/204 (4%)
Frame = +1
Query: 217 LPMPSDACDEPPK-FESMRPQVLNTTYRPGDRVEYECRPGFRPMVPALPTSSVCQDDNTW 393
LP S C PP + R Q + PG V Y C PG+ A S C W
Sbjct: 290 LPSCSRVCQPPPDVLHAERTQRDKDNFSPGQEVFYSCEPGYDLRGAA---SMRCTPQGDW 346
Query: 394 SPLQEACRRKACSN-LPDPLNGQVSYPNGDTLFGSKAQFTCNTGFYIIGAETVYCQVSGN 570
SP C K+C + + LNG+V +P L G+K F C+ GF + G+ YC ++G
Sbjct: 347 SPAAPTCEVKSCDDFMGQLLNGRVLFPVNLQL-GAKVDFVCDEGFQLKGSSASYCVLAGM 405
Query: 571 VMAWSEPSPLCEKILCKPPGEIPNGKYTNSHKDVFEYNEVVTYSCLSSTGPD---EFSLV 741
W+ P+CE+I C P IPNG++T +VF + + V Y+C PD F L+
Sbjct: 406 ESLWNSSVPVCEQIFCPSPPVIPNGRHTGKPLEVFPFGKTVNYTC--DPHPDRGTSFDLI 463
Query: 742 GESSLFCI----GKDEWSSDPPEC 801
GES++ C G WSS P C
Sbjct: 464 GESTIRCTSDPQGNGVWSSPAPRC 487
Score = 119 bits (299), Expect = 4e-27
Identities = 71/204 (34%), Positives = 97/204 (47%), Gaps = 9/204 (4%)
Frame = +1
Query: 217 LPMPSDACDEPPK-FESMRPQVLNTTYRPGDRVEYECRPGFRPMVPALPTSSVCQDDNTW 393
LP S C PP + R Q + PG V Y C PG+ A S C W
Sbjct: 740 LPSCSRVCQPPPDVLHAERTQRDKDNFSPGQEVFYSCEPGYDLRGAA---SMRCTPQGDW 796
Query: 394 SPLQEACRRKACSN-LPDPLNGQVSYPNGDTLFGSKAQFTCNTGFYIIGAETVYCQVSGN 570
SP C K+C + + LNG+V +P L G+K F C+ GF + G+ YC ++G
Sbjct: 797 SPAAPTCEVKSCDDFMGQLLNGRVLFPVNLQL-GAKVDFVCDEGFQLKGSSASYCVLAGM 855
Query: 571 VMAWSEPSPLCEKILCKPPGEIPNGKYTNSHKDVFEYNEVVTYSCLSSTGPD---EFSLV 741
W+ P+CE+I C P IPNG++T +VF + + V Y+C PD F L+
Sbjct: 856 ESLWNSSVPVCEQIFCPSPPVIPNGRHTGKPLEVFPFGKTVNYTC--DPHPDRGTSFDLI 913
Query: 742 GESSLFCI----GKDEWSSDPPEC 801
GES++ C G WSS P C
Sbjct: 914 GESTIRCTSDPQGNGVWSSPAPRC 937
Score = 119 bits (299), Expect = 4e-27
Identities = 71/204 (34%), Positives = 97/204 (47%), Gaps = 9/204 (4%)
Frame = +1
Query: 217 LPMPSDACDEPPK-FESMRPQVLNTTYRPGDRVEYECRPGFRPMVPALPTSSVCQDDNTW 393
LP S C PP + R Q + PG V Y C PG+ A S C W
Sbjct: 1190 LPSCSRVCQPPPDVLHAERTQRDKDNFSPGQEVFYSCEPGYDLRGAA---SMRCTPQGDW 1246
Query: 394 SPLQEACRRKACSN-LPDPLNGQVSYPNGDTLFGSKAQFTCNTGFYIIGAETVYCQVSGN 570
SP C K+C + + LNG+V +P L G+K F C+ GF + G+ YC ++G
Sbjct: 1247 SPAAPTCEVKSCDDFMGQLLNGRVLFPVNLQL-GAKVDFVCDEGFQLKGSSASYCVLAGM 1305
Query: 571 VMAWSEPSPLCEKILCKPPGEIPNGKYTNSHKDVFEYNEVVTYSCLSSTGPD---EFSLV 741
W+ P+CE+I C P IPNG++T +VF + + V Y+C PD F L+
Sbjct: 1306 ESLWNSSVPVCEQIFCPSPPVIPNGRHTGKPLEVFPFGKAVNYTC--DPHPDRGTSFDLI 1363
Query: 742 GESSLFCI----GKDEWSSDPPEC 801
GES++ C G WSS P C
Sbjct: 1364 GESTIRCTSDPQGNGVWSSPAPRC 1387
Score = 100 bits (248), Expect = 3e-21
Identities = 64/205 (31%), Positives = 92/205 (44%), Gaps = 9/205 (4%)
Frame = +1
Query: 217 LPMPSDACDEPPKF-ESMRPQVLNTTYRPGDRVEYECRPGFRPMVPALPTSSVCQDDNTW 393
LP S C PP+ + PG V Y C PG+ A S C W
Sbjct: 1640 LPSCSRVCQPPPEILHGEHTPSHQDNFSPGQEVFYSCEPGYDLRGAA---SLHCTPQGDW 1696
Query: 394 SPLQEACRRKACSNLPDPL-NGQVSYPNGDTLFGSKAQFTCNTGFYIIGAETVYCQVSGN 570
SP C K+C + L +G+V +P L G+K F C+ GF + G+ +C + G
Sbjct: 1697 SPEAPRCAVKSCDDFLGQLPHGRVLFPLNLQL-GAKVSFVCDEGFRLKGSSVSHCVLVGM 1755
Query: 571 VMAWSEPSPLCEKILCKPPGEIPNGKYTNSHKDVFEYNEVVTYSCLSSTGPDE---FSLV 741
W+ P+CE I C P I NG++T + Y + ++Y+C PD F+L+
Sbjct: 1756 RSLWNNSVPVCEHIFCPNPPAILNGRHTGTPSGDIPYGKEISYTC--DPHPDRGMTFNLI 1813
Query: 742 GESSLFCI----GKDEWSSDPPECK 804
GES++ C G WSS P C+
Sbjct: 1814 GESTIRCTSDPHGNGVWSSPAPRCE 1838
Score = 99.4 bits (246), Expect = 5e-21
Identities = 65/205 (31%), Positives = 94/205 (45%), Gaps = 9/205 (4%)
Frame = +1
Query: 217 LPMPSDACDEPPKFESMRPQVLNT-TYRPGDRVEYECRPGFRPMVPALPTSSVCQDDNTW 393
LP S C PP+ + + + PG V Y C P + A S C W
Sbjct: 2093 LPHCSRVCQPPPEILHGEHTLSHQDNFSPGQEVFYSCEPSYDLRGAA---SLHCTPQGDW 2149
Query: 394 SPLQEACRRKACSNLPDPL-NGQVSYPNGDTLFGSKAQFTCNTGFYIIGAETVYCQVSGN 570
SP C K+C + L +G+V P L G+K F C+ GF + G +C ++G
Sbjct: 2150 SPEAPRCTVKSCDDFLGQLPHGRVLLPLNLQL-GAKVSFVCDEGFRLKGRSASHCVLAGM 2208
Query: 571 VMAWSEPSPLCEKILCKPPGEIPNGKYTNSHKDVFEYNEVVTYSCLSSTGPDE---FSLV 741
W+ P+CE+I C P I NG++T + Y + ++Y+C T PD F+L+
Sbjct: 2209 KALWNSSVPVCEQIFCPNPPAILNGRHTGTPFGDIPYGKEISYAC--DTHPDRGMTFNLI 2266
Query: 742 GESSLFCI----GKDEWSSDPPECK 804
GESS+ C G WSS P C+
Sbjct: 2267 GESSIRCTSDPQGNGVWSSPAPRCE 2291
Score = 80.9 bits (198), Expect = 2e-15
Identities = 61/213 (28%), Positives = 91/213 (42%), Gaps = 12/213 (5%)
Frame = +1
Query: 235 ACDEPPKFESMRPQVLN-TTYRPGDRVEYECRPG-----FRPMVPALPTSSVCQDDNT-- 390
+C+ PP + N T++ G V Y+C G +V +DD
Sbjct: 1968 SCEPPPTISNGDFYSNNRTSFHNGTVVTYQCHTGPDGEQLFELVGERSIYCTSKDDQVGV 2027
Query: 391 WSPLQEACRRKACSNLPDPLNGQVSYPNGDTLFGSKA--QFTCNTGFYIIGAETVYCQVS 564
WS C P+ N + P + F +F C GF ++G+ TV CQ +
Sbjct: 2028 WSSPPPRCISTNKCTAPEVENA-IRVPGNRSFFTLTEIIRFRCQPGFVMVGSHTVQCQTN 2086
Query: 565 GNVMAWSEPSPLCEKILCKPPGEIPNGKYTNSHKDVFEYNEVVTYSCLSSTGPDEFSLVG 744
G W P C ++ C+PP EI +G++T SH+D F + V YSC S + L G
Sbjct: 2087 GR---WGPKLPHCSRV-CQPPPEILHGEHTLSHQDNFSPGQEVFYSCEPS-----YDLRG 2137
Query: 745 ESSLFCIGKDEWSSDPPEC--KGSQMSISSTPH 837
+SL C + +WS + P C K + PH
Sbjct: 2138 AASLHCTPQGDWSPEAPRCTVKSCDDFLGQLPH 2170
Score = 70.1 bits (170), Expect = 3e-12
Identities = 50/180 (27%), Positives = 76/180 (42%), Gaps = 12/180 (6%)
Frame = +1
Query: 301 GDRVEYECRPGFRPMVPALPTSSVCQDDNTWSPLQEACRRKACSNLPDPLNGQ-VSYPNG 477
G +V + C GFR + + W+ C + C N P LNG+ P G
Sbjct: 2182 GAKVSFVCDEGFRLKGRSASHCVLAGMKALWNSSVPVCEQIFCPNPPAILNGRHTGTPFG 2241
Query: 478 DTLFGSKAQFTCNTG------FYIIGAETVYC--QVSGNVMAWSEPSPLCEKIL---CKP 624
D +G + + C+T F +IG ++ C GN + WS P+P CE + C
Sbjct: 2242 DIPYGKEISYACDTHPDRGMTFNLIGESSIRCTSDPQGNGV-WSSPAPRCELSVPAACPH 2300
Query: 625 PGEIPNGKYTNSHKDVFEYNEVVTYSCLSSTGPDEFSLVGESSLFCIGKDEWSSDPPECK 804
P +I NG Y H ++ ++Y C + LVG+ +FC + WS CK
Sbjct: 2301 PPKIQNGHYIGGHVSLYLPGMTISYIC-----DPGYLLVGKGFIFCTDQGIWSQLDHYCK 2355
Score = 68.2 bits (165), Expect = 1e-11
Identities = 53/189 (28%), Positives = 75/189 (39%), Gaps = 10/189 (5%)
Frame = +1
Query: 301 GDRVEYECRPGFRPMV-------PALPTSSVCQDDNTWSPLQEACRRKACSNLPDPLNGQ 459
G V Y C G R P++ +S WS C P+ NG
Sbjct: 1538 GSVVTYRCNLGSRGRKVFELVGEPSIYCTSNDDQVGIWSGPAPQCIIPNKCTPPNVENGI 1597
Query: 460 VSYPNGDTL-FGSKAQFTCNTGFYIIGAETVYCQVSGNVMAWSEPSPLCEKILCKPPGEI 636
+ N +F C GF + G V CQ + W P C ++ C+PP EI
Sbjct: 1598 LVSDNRSLFSLNEVVEFRCQPGFVMKGPRRVKCQA---LNKWEPELPSCSRV-CQPPPEI 1653
Query: 637 PNGKYTNSHKDVFEYNEVVTYSCLSSTGPDEFSLVGESSLFCIGKDEWSSDPPEC--KGS 810
+G++T SH+D F + V YSC + L G +SL C + +WS + P C K
Sbjct: 1654 LHGEHTPSHQDNFSPGQEVFYSC-----EPGYDLRGAASLHCTPQGDWSPEAPRCAVKSC 1708
Query: 811 QMSISSTPH 837
+ PH
Sbjct: 1709 DDFLGQLPH 1717
Score = 57.4 bits (137), Expect = 2e-08
Identities = 47/176 (26%), Positives = 68/176 (38%), Gaps = 8/176 (4%)
Frame = +1
Query: 301 GDRVEYECRPGF--RPMVPALPTSSV---CQDDNT--WSPLQEACRRKACSNLPDPLNGQ 459
G V Y C PG R + + S+ DD WS C P+ NG
Sbjct: 188 GSVVTYRCNPGSGGRKVFELVGEPSIYCTSNDDQVGIWSGPAPQCIIPNKCTPPNVENGI 247
Query: 460 VSYPNGDTL-FGSKAQFTCNTGFYIIGAETVYCQVSGNVMAWSEPSPLCEKILCKPPGEI 636
+ N +F C GF + G V CQ W P C ++ C+PP ++
Sbjct: 248 LVSDNRSLFSLNEVVEFRCQPGFVMKGPRRVKCQALNK---WEPELPSCSRV-CQPPPDV 303
Query: 637 PNGKYTNSHKDVFEYNEVVTYSCLSSTGPDEFSLVGESSLFCIGKDEWSSDPPECK 804
+ + T KD F + V YSC + L G +S+ C + +WS P C+
Sbjct: 304 LHAERTQRDKDNFSPGQEVFYSCEPG-----YDLRGAASMRCTPQGDWSPAAPTCE 354
Score = 57.4 bits (137), Expect = 2e-08
Identities = 47/176 (26%), Positives = 68/176 (38%), Gaps = 8/176 (4%)
Frame = +1
Query: 301 GDRVEYECRPGF--RPMVPALPTSSV---CQDDNT--WSPLQEACRRKACSNLPDPLNGQ 459
G V Y C PG R + + S+ DD WS C P+ NG
Sbjct: 638 GSVVTYRCNPGSGGRKVFELVGEPSIYCTSNDDQVGIWSGPAPQCIIPNKCTPPNVENGI 697
Query: 460 VSYPNGDTL-FGSKAQFTCNTGFYIIGAETVYCQVSGNVMAWSEPSPLCEKILCKPPGEI 636
+ N +F C GF + G V CQ W P C ++ C+PP ++
Sbjct: 698 LVSDNRSLFSLNEVVEFRCQPGFVMKGPRRVKCQALNK---WEPELPSCSRV-CQPPPDV 753
Query: 637 PNGKYTNSHKDVFEYNEVVTYSCLSSTGPDEFSLVGESSLFCIGKDEWSSDPPECK 804
+ + T KD F + V YSC + L G +S+ C + +WS P C+
Sbjct: 754 LHAERTQRDKDNFSPGQEVFYSCEPG-----YDLRGAASMRCTPQGDWSPAAPTCE 804
Score = 57.4 bits (137), Expect = 2e-08
Identities = 47/176 (26%), Positives = 68/176 (38%), Gaps = 8/176 (4%)
Frame = +1
Query: 301 GDRVEYECRPGF--RPMVPALPTSSV---CQDDNT--WSPLQEACRRKACSNLPDPLNGQ 459
G V Y C PG R + + S+ DD WS C P+ NG
Sbjct: 1088 GSVVTYRCNPGSGGRKVFELVGEPSIYCTSNDDQVGIWSGPAPQCIIPNKCTPPNVENGI 1147
Query: 460 VSYPNGDTL-FGSKAQFTCNTGFYIIGAETVYCQVSGNVMAWSEPSPLCEKILCKPPGEI 636
+ N +F C GF + G V CQ W P C ++ C+PP ++
Sbjct: 1148 LVSDNRSLFSLNEVVEFRCQPGFVMKGPRRVKCQALNK---WEPELPSCSRV-CQPPPDV 1203
Query: 637 PNGKYTNSHKDVFEYNEVVTYSCLSSTGPDEFSLVGESSLFCIGKDEWSSDPPECK 804
+ + T KD F + V YSC + L G +S+ C + +WS P C+
Sbjct: 1204 LHAERTQRDKDNFSPGQEVFYSCEPG-----YDLRGAASMRCTPQGDWSPAAPTCE 1254
Database: RefSeq49_HP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,297,164
Number of sequences in database: 32,964
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 32964
Number of Hits to DB: 45,069,944
Number of extensions: 1279955
Number of successful extensions: 4428
Number of sequences better than 1.0e-05: 53
Number of HSP's gapped: 3882
Number of HSP's successfully gapped: 208
Length of query: 350
Length of database: 18,297,164
Length adjustment: 103
Effective length of query: 247
Effective length of database: 14,901,872
Effective search space: 3680762384
Effective search space used: 3680762384
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to Sscrofa10_2
BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-014101
(1051 letters)
Database: Sscrofa_10.2.fasta
4582 sequences; 2,808,509,378 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Sscrofa_Chr09 94 2e-16
>Sscrofa_Chr09
|| Length = 153670197
Score = 93.7 bits (47), Expect = 2e-16
Identities = 107/127 (84%)
Strand = Plus / Plus
Query: 288 cacttacagacccggagaccgtgtagagtatgaatgtcgccccgggttccggcccatggt 347
|||||| ||||| || ||||||| | | ||||||||||||| || |||| ||||||||
Sbjct: 74644058 cacttatagacctggggaccgtgcacaatatgaatgtcgcctaggtttccatcccatggt 74644117
Query: 348 tcctgcgcttcccacctcttccgtctgtcaggacgataatacgtggtcacccctccagga 407
|||||| ||||||||| |||| || |||||||| |||| || |||||||| ||||||||
Sbjct: 74644118 tcctgcccttcccaccacttctgtttgtcaggataataacacatggtcacctctccagga 74644177
Query: 408 ggcttgt 414
|||||||
Sbjct: 74644178 ggcttgt 74644184
Score = 87.7 bits (44), Expect = 1e-14
Identities = 104/124 (83%)
Strand = Plus / Minus
Query: 639 aaatggaaaatacaccaatagccataaggatgtatttgaatacaatgaagtagtaactta 698
|||||||||| | ||||||||| | | | || |||||||||| |||||| ||||||||||
Sbjct: 74595369 aaatggaaaacataccaatagctacaggaatatatttgaatataatgaattagtaactta 74595310
Query: 699 cagttgtctttcttcaactggaccggatgaattttcacttgttggagagagcagcctttt 758
| |||| | |||||| |||||| ||||||| ||||||||||||||| |||| |||||
Sbjct: 74595309 tacttgtaatccttcaaatggaccagatgaatattcacttgttggagaaagcaaactttt 74595250
Query: 759 ttgt 762
||||
Sbjct: 74595249 ttgt 74595246
Database: Sscrofa_10.2.fasta
Posted date: Nov 16, 2011 10:34 AM
Number of letters in database: 2,808,509,378
Number of sequences in database: 4582
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4582
Number of Hits to DB: 29,234,764
Number of extensions: 118
Number of successful extensions: 118
Number of sequences better than 1.0e-05: 1
Number of HSP's gapped: 118
Number of HSP's successfully gapped: 2
Length of query: 1051
Length of database: 2,808,509,378
Length adjustment: 21
Effective length of query: 1030
Effective length of database: 2,808,413,156
Effective search space: 2892665550680
Effective search space used: 2892665550680
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 18 (36.2 bits)
S2: 30 (60.0 bits)