Search to RefSeqBP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-014700
(1244 letters)
Database: RefSeq49_BP.fasta
33,088 sequences; 17,681,374 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001039511.1| four and a half LIM domains protein 2 [Bos t... 497 e-141
Alignment gi|NP_001069847.1| four and a half LIM domains protein 5 [Bos t... 316 2e-86
Alignment gi|NP_001029395.1| four and a half LIM domains protein 3 [Bos t... 311 8e-85
Alignment gi|NP_001106730.1| four and a half LIM domains 1 isoform 2 [Bos... 277 2e-74
Alignment gi|NP_001106729.1| four and a half LIM domains 1 isoform 1 [Bos... 277 2e-74
Alignment gi|NP_001029513.1| four and a half LIM domains 1 isoform 3 [Bos... 188 1e-47
Alignment gi|XP_002694569.1| PREDICTED: paxillin-like [Bos taurus]. 128 9e-30
Alignment gi|XP_595626.4| PREDICTED: paxillin-like [Bos taurus]. 128 9e-30
Alignment gi|NP_001124223.1| LIM and senescent cell antigen-like-containi... 114 1e-25
Alignment gi|NP_001076964.1| LIM and senescent cell antigen-like domains ... 114 2e-25
>ref|NP_001039511.1| four and a half LIM domains protein 2 [Bos taurus].
Length = 279
Score = 497 bits (1280), Expect = e-141
Identities = 215/229 (93%), Positives = 224/229 (97%)
Frame = +2
Query: 263 MTERFDCHHCENSLFGRKYVLREEQPYCVGCFEALFASTCEECGKLIGCDCKDLSYKDRH 442
MTERFDCHHCE+SLFGRKYVLREEQPYCV CFEALFASTCEECGKLIGCDCKDLSYKDRH
Sbjct: 1 MTERFDCHHCEDSLFGRKYVLREEQPYCVACFEALFASTCEECGKLIGCDCKDLSYKDRH 60
Query: 443 WHEACFHCSRCRSSLVDKPFAAKEDQVLCTDCYSQEYSSRCQECRKAIMPGTRKMEYKGS 622
WHEACFHCSRCR SLVDKPFAAKEDQ+LCTDCYSQEYSSRCQEC+K+IMPGTRKMEYKGS
Sbjct: 61 WHEACFHCSRCRGSLVDKPFAAKEDQLLCTDCYSQEYSSRCQECKKSIMPGTRKMEYKGS 120
Query: 623 SWHETCFTCHRCQQPIGTKSFIPKDGQNFCVPCYEKQHALQCIQCKKPITSGGVTYREQP 802
SWHETCF CHRCQQPIGTKSFIPKD +NFCVPCYE+Q+ALQC+QCKKPIT+GGVTYREQP
Sbjct: 121 SWHETCFICHRCQQPIGTKSFIPKDSENFCVPCYERQYALQCVQCKKPITTGGVTYREQP 180
Query: 803 WHRECFVCTACKKPLSGQRFTSRDEFAYCLGCFCDLYAKKCTGCANPIS 949
WHRECFVCTACKKPLSGQRFTSRDEFAYCLGCFCDLYAKKC GCANPIS
Sbjct: 181 WHRECFVCTACKKPLSGQRFTSRDEFAYCLGCFCDLYAKKCAGCANPIS 229
Score = 159 bits (403), Expect = 4e-39
Identities = 68/216 (31%), Positives = 110/216 (50%), Gaps = 4/216 (1%)
Frame = +2
Query: 275 FDCHHCENSLFGRKYVLREEQPYCVGCFEALFASTCEECGKLIGCDCKDLSYKDRHWHEA 454
F C C SL + + +E+Q C C+ ++S C+EC K I + + YK WHE
Sbjct: 66 FHCSRCRGSLVDKPFAAKEDQLLCTDCYSQEYSSRCQECKKSIMPGTRKMEYKGSSWHET 125
Query: 455 CFHCSRCRSSLVDKPFAAKEDQVLCTDCYSQEYSSRCQECRKAIMPGTRKMEYKGSSWHE 634
CF C RC+ + K F K+ + C CY ++Y+ +C +C+K I G + Y+ WH
Sbjct: 126 CFICHRCQQPIGTKSFIPKDSENFCVPCYERQYALQCVQCKKPITTGG--VTYREQPWHR 183
Query: 635 TCFTCHRCQQPIGTKSFIPKDGQNFCVPCYEKQHALQCIQCKKPITSGG----VTYREQP 802
CF C C++P+ + F +D +C+ C+ +A +C C PI+ G +++ E+
Sbjct: 184 ECFVCTACKKPLSGQRFTSRDEFAYCLGCFCDLYAKKCAGCANPISGLGGTKYISFEERQ 243
Query: 803 WHRECFVCTACKKPLSGQRFTSRDEFAYCLGCFCDL 910
WH +CF C C L G+ F + + C C D+
Sbjct: 244 WHNDCFNCKKCSLSLVGRGFLTERDDILCPDCGKDI 279
Score = 82.0 bits (201), Expect = 1e-15
Identities = 36/92 (39%), Positives = 52/92 (56%), Gaps = 2/92 (2%)
Frame = +2
Query: 269 ERFDCHHCENSLFGRKYVLREEQPYCVGCFEALFASTCEECGKLIGC--DCKDLSYKDRH 442
E F C C+ L G+++ R+E YC+GCF L+A C C I K +S+++R
Sbjct: 184 ECFVCTACKKPLSGQRFTSRDEFAYCLGCFCDLYAKKCAGCANPISGLGGTKYISFEERQ 243
Query: 443 WHEACFHCSRCRSSLVDKPFAAKEDQVLCTDC 538
WH CF+C +C SLV + F + D +LC DC
Sbjct: 244 WHNDCFNCKKCSLSLVGRGFLTERDDILCPDC 275
>ref|NP_001069847.1| four and a half LIM domains protein 5 [Bos taurus].
Length = 284
Score = 316 bits (810), Expect = 2e-86
Identities = 127/228 (55%), Positives = 172/228 (75%)
Frame = +2
Query: 266 TERFDCHHCENSLFGRKYVLREEQPYCVGCFEALFASTCEECGKLIGCDCKDLSYKDRHW 445
T +F C +C SL G+KYVL+++ PYCV C++ +F++ CEEC + I KDL YK HW
Sbjct: 3 TPQFYCQYCMASLLGKKYVLKDDNPYCVSCYDRIFSNYCEECKEPIESGSKDLCYKGHHW 62
Query: 446 HEACFHCSRCRSSLVDKPFAAKEDQVLCTDCYSQEYSSRCQECRKAIMPGTRKMEYKGSS 625
HE CF+C++C SLV+KPFAAK++++LC++CYS E SS+C C+K IMPG+RKME+KG+
Sbjct: 63 HEGCFNCTKCNHSLVEKPFAAKDERLLCSECYSNECSSKCFHCKKTIMPGSRKMEFKGNY 122
Query: 626 WHETCFTCHRCQQPIGTKSFIPKDGQNFCVPCYEKQHALQCIQCKKPITSGGVTYREQPW 805
WHETCF C C+QPIGTK I K+ N+CVPC+EK+ A C CKK ITSGG+T+R+QPW
Sbjct: 123 WHETCFVCEHCRQPIGTKPLISKESGNYCVPCFEKEFAHYCSFCKKVITSGGITFRDQPW 182
Query: 806 HRECFVCTACKKPLSGQRFTSRDEFAYCLGCFCDLYAKKCTGCANPIS 949
H+ECF+C+ C+K L + F SRD++ +CL C+ LYAKKC C PI+
Sbjct: 183 HKECFLCSGCRKELCEEEFMSRDDYPFCLDCYNHLYAKKCAACTKPIT 230
Score = 152 bits (385), Expect = 5e-37
Identities = 65/212 (30%), Positives = 109/212 (51%), Gaps = 4/212 (1%)
Frame = +2
Query: 275 FDCHHCENSLFGRKYVLREEQPYCVGCFEALFASTCEECGKLIGCDCKDLSYKDRHWHEA 454
F+C C +SL + + ++E+ C C+ +S C C K I + + +K +WHE
Sbjct: 67 FNCTKCNHSLVEKPFAAKDERLLCSECYSNECSSKCFHCKKTIMPGSRKMEFKGNYWHET 126
Query: 455 CFHCSRCRSSLVDKPFAAKEDQVLCTDCYSQEYSSRCQECRKAIMPGTRKMEYKGSSWHE 634
CF C CR + KP +KE C C+ +E++ C C+K I G + ++ WH+
Sbjct: 127 CFVCEHCRQPIGTKPLISKESGNYCVPCFEKEFAHYCSFCKKVITSGG--ITFRDQPWHK 184
Query: 635 TCFTCHRCQQPIGTKSFIPKDGQNFCVPCYEKQHALQCIQCKKPIT----SGGVTYREQP 802
CF C C++ + + F+ +D FC+ CY +A +C C KPIT + + ++++
Sbjct: 185 ECFLCSGCRKELCEEEFMSRDDYPFCLDCYNHLYAKKCAACTKPITGLRGAKFICFQDRQ 244
Query: 803 WHRECFVCTACKKPLSGQRFTSRDEFAYCLGC 898
WH ECF C C L G+ F + ++ +C C
Sbjct: 245 WHSECFNCGKCSVSLVGEGFLTHNKEIFCRKC 276
Score = 137 bits (345), Expect = 2e-32
Identities = 57/167 (34%), Positives = 91/167 (54%), Gaps = 2/167 (1%)
Frame = +2
Query: 458 FHCSRCRSSLVDKPFAAKEDQVLCTDCYSQEYSSRCQECRKAIMPGTRKMEYKGSSWHET 637
F+C C +SL+ K + K+D C CY + +S+ C+EC++ I G++ + YKG WHE
Sbjct: 6 FYCQYCMASLLGKKYVLKDDNPYCVSCYDRIFSNYCEECKEPIESGSKDLCYKGHHWHEG 65
Query: 638 CFTCHRCQQPIGTKSFIPKDGQNFCVPCYEKQHALQCIQCKKPITSGG--VTYREQPWHR 811
CF C +C + K F KD + C CY + + +C CKK I G + ++ WH
Sbjct: 66 CFNCTKCNHSLVEKPFAAKDERLLCSECYSNECSSKCFHCKKTIMPGSRKMEFKGNYWHE 125
Query: 812 ECFVCTACKKPLSGQRFTSRDEFAYCLGCFCDLYAKKCTGCANPISA 952
CFVC C++P+ + S++ YC+ CF +A C+ C I++
Sbjct: 126 TCFVCEHCRQPIGTKPLISKESGNYCVPCFEKEFAHYCSFCKKVITS 172
Score = 71.6 bits (174), Expect = 1e-12
Identities = 31/94 (32%), Positives = 48/94 (51%), Gaps = 2/94 (2%)
Frame = +2
Query: 269 ERFDCHHCENSLFGRKYVLREEQPYCVGCFEALFASTCEECGKLIGC--DCKDLSYKDRH 442
E F C C L +++ R++ P+C+ C+ L+A C C K I K + ++DR
Sbjct: 185 ECFLCSGCRKELCEEEFMSRDDYPFCLDCYNHLYAKKCAACTKPITGLRGAKFICFQDRQ 244
Query: 443 WHEACFHCSRCRSSLVDKPFAAKEDQVLCTDCYS 544
WH CF+C +C SLV + F ++ C C S
Sbjct: 245 WHSECFNCGKCSVSLVGEGFLTHNKEIFCRKCGS 278
>ref|NP_001029395.1| four and a half LIM domains protein 3 [Bos taurus].
Length = 280
Score = 311 bits (797), Expect = 8e-85
Identities = 122/229 (53%), Positives = 170/229 (74%)
Frame = +2
Query: 263 MTERFDCHHCENSLFGRKYVLREEQPYCVGCFEALFASTCEECGKLIGCDCKDLSYKDRH 442
M+E FDC C SL+GRKY+ ++ PYCV C++ FA+TC EC +LIG D ++L Y+DRH
Sbjct: 1 MSEAFDCAKCSESLYGRKYIQTDDGPYCVPCYDNTFANTCAECQQLIGHDSRELFYEDRH 60
Query: 443 WHEACFHCSRCRSSLVDKPFAAKEDQVLCTDCYSQEYSSRCQECRKAIMPGTRKMEYKGS 622
+HE CF C RC+ SL D+PF ++ ++LC DCY +SS+C C + +MPG+RK+EY G
Sbjct: 61 FHEGCFRCCRCQRSLADEPFTCQDSELLCNDCYCSAFSSQCSACGETVMPGSRKLEYGGQ 120
Query: 623 SWHETCFTCHRCQQPIGTKSFIPKDGQNFCVPCYEKQHALQCIQCKKPITSGGVTYREQP 802
+WHE CF C C+QP+G++SF+P G ++CVPCYE + A +C +C K +T GGVTYR+QP
Sbjct: 121 TWHEHCFLCSGCEQPLGSRSFVPDKGAHYCVPCYENKFAPRCARCSKTLTQGGVTYRDQP 180
Query: 803 WHRECFVCTACKKPLSGQRFTSRDEFAYCLGCFCDLYAKKCTGCANPIS 949
WHREC VCT C+ PL+GQ+FTSR++ YC+ CF +L+A KC+ C PI+
Sbjct: 181 WHRECLVCTGCQTPLAGQQFTSREDDPYCVTCFGELFAPKCSSCKRPIT 229
Score = 89.0 bits (219), Expect = 8e-18
Identities = 40/88 (45%), Positives = 53/88 (60%), Gaps = 2/88 (2%)
Frame = +2
Query: 281 CHHCENSLFGRKYVLREEQPYCVGCFEALFASTCEECGKLIGC--DCKDLSYKDRHWHEA 454
C C+ L G+++ RE+ PYCV CF LFA C C + I K +S++DRHWH +
Sbjct: 188 CTGCQTPLAGQQFTSREDDPYCVTCFGELFAPKCSSCKRPITGLGGGKYVSFEDRHWHHS 247
Query: 455 CFHCSRCRSSLVDKPFAAKEDQVLCTDC 538
CF C+RC +SLV + F DQVLC C
Sbjct: 248 CFSCARCSTSLVGQGFVPDGDQVLCQGC 275
>ref|NP_001106730.1| four and a half LIM domains 1 isoform 2 [Bos taurus].
Length = 280
Score = 277 bits (708), Expect = 2e-74
Identities = 111/231 (48%), Positives = 160/231 (69%)
Frame = +2
Query: 263 MTERFDCHHCENSLFGRKYVLREEQPYCVGCFEALFASTCEECGKLIGCDCKDLSYKDRH 442
M E+FDCH+C ++L G+KYV ++ C+ CF+ A+TC +C K IG D K++ YK+R+
Sbjct: 1 MAEKFDCHYCRDNLQGKKYVQKDGHHCCLKCFDKFCANTCVQCRKPIGADSKEVHYKNRY 60
Query: 443 WHEACFHCSRCRSSLVDKPFAAKEDQVLCTDCYSQEYSSRCQECRKAIMPGTRKMEYKGS 622
WH+ CF CS+C L + F AK++++LC C ++E + +C+ C K I+ G + +EYKG+
Sbjct: 61 WHDTCFRCSKCLQPLASETFVAKDNKILCNKCTTREDNPKCKGCLKPIVAGDQNVEYKGT 120
Query: 623 SWHETCFTCHRCQQPIGTKSFIPKDGQNFCVPCYEKQHALQCIQCKKPITSGGVTYREQP 802
WH+ CFTC C+Q IGT SF PK +CV C+E + A C++C K ITSGG+TY++QP
Sbjct: 121 VWHKDCFTCSNCKQVIGTGSFFPKGEDFYCVTCHEAKFAKHCVKCNKAITSGGITYQDQP 180
Query: 803 WHRECFVCTACKKPLSGQRFTSRDEFAYCLGCFCDLYAKKCTGCANPISAF 955
WH ECFVC C K L+GQRFT+ ++ YC+ C+ + AKKC GC NPI+ F
Sbjct: 181 WHAECFVCVTCSKKLAGQRFTAVEDQYYCVDCYKNFVAKKCAGCKNPITGF 231
Score = 135 bits (341), Expect = 6e-32
Identities = 67/213 (31%), Positives = 95/213 (44%), Gaps = 5/213 (2%)
Frame = +2
Query: 275 FDCHHCENSLFGRKYVLREEQPYCVGCFEALFASTCEECGKLIGCDCKDLSYKDRHWHEA 454
F C C L +V ++ + C C C+ C K I +++ YK WH+
Sbjct: 66 FRCSKCLQPLASETFVAKDNKILCNKCTTREDNPKCKGCLKPIVAGDQNVEYKGTVWHKD 125
Query: 455 CFHCSRCRSSLVDKPFAAKEDQVLCTDCYSQEYSSRCQECRKAIMPGTRKMEYKGSSWHE 634
CF CS C+ + F K + C C+ +++ C +C KAI G + Y+ WH
Sbjct: 126 CFTCSNCKQVIGTGSFFPKGEDFYCVTCHEAKFAKHCVKCNKAITSGG--ITYQDQPWHA 183
Query: 635 TCFTCHRCQQPIGTKSFIPKDGQNFCVPCYEKQHALQCIQCKKPITSGG-----VTYREQ 799
CF C C + + + F + Q +CV CY+ A +C CK PIT G V Y Q
Sbjct: 184 ECFVCVTCSKKLAGQRFTAVEDQYYCVDCYKNFVAKKCAGCKNPITGFGKGSSVVAYEGQ 243
Query: 800 PWHRECFVCTACKKPLSGQRFTSRDEFAYCLGC 898
WH CF C C L+ +RF E YC C
Sbjct: 244 SWHDYCFHCKKCSVNLANKRFVFHQEQVYCPDC 276
Score = 113 bits (283), Expect = 3e-25
Identities = 53/155 (34%), Positives = 76/155 (49%), Gaps = 3/155 (1%)
Frame = +2
Query: 275 FDCHHCENSLFGRKYVLREEQPYCVGCFEALFASTCEECGKLIGCDCKDLSYKDRHWHEA 454
F C +C+ + + + E YCV C EA FA C +C K I ++Y+D+ WH
Sbjct: 127 FTCSNCKQVIGTGSFFPKGEDFYCVTCHEAKFAKHCVKCNKAITSG--GITYQDQPWHAE 184
Query: 455 CFHCSRCRSSLVDKPFAAKEDQVLCTDCYSQEYSSRCQECRKAIM---PGTRKMEYKGSS 625
CF C C L + F A EDQ C DCY + +C C+ I G+ + Y+G S
Sbjct: 185 CFVCVTCSKKLAGQRFTAVEDQYYCVDCYKNFVAKKCAGCKNPITGFGKGSSVVAYEGQS 244
Query: 626 WHETCFTCHRCQQPIGTKSFIPKDGQNFCVPCYEK 730
WH+ CF C +C + K F+ Q +C C +K
Sbjct: 245 WHDYCFHCKKCSVNLANKRFVFHQEQVYCPDCAKK 279
>ref|NP_001106729.1| four and a half LIM domains 1 isoform 1 [Bos taurus].
Length = 296
Score = 277 bits (708), Expect = 2e-74
Identities = 111/231 (48%), Positives = 160/231 (69%)
Frame = +2
Query: 263 MTERFDCHHCENSLFGRKYVLREEQPYCVGCFEALFASTCEECGKLIGCDCKDLSYKDRH 442
M E+FDCH+C ++L G+KYV ++ C+ CF+ A+TC +C K IG D K++ YK+R+
Sbjct: 17 MAEKFDCHYCRDNLQGKKYVQKDGHHCCLKCFDKFCANTCVQCRKPIGADSKEVHYKNRY 76
Query: 443 WHEACFHCSRCRSSLVDKPFAAKEDQVLCTDCYSQEYSSRCQECRKAIMPGTRKMEYKGS 622
WH+ CF CS+C L + F AK++++LC C ++E + +C+ C K I+ G + +EYKG+
Sbjct: 77 WHDTCFRCSKCLQPLASETFVAKDNKILCNKCTTREDNPKCKGCLKPIVAGDQNVEYKGT 136
Query: 623 SWHETCFTCHRCQQPIGTKSFIPKDGQNFCVPCYEKQHALQCIQCKKPITSGGVTYREQP 802
WH+ CFTC C+Q IGT SF PK +CV C+E + A C++C K ITSGG+TY++QP
Sbjct: 137 VWHKDCFTCSNCKQVIGTGSFFPKGEDFYCVTCHEAKFAKHCVKCNKAITSGGITYQDQP 196
Query: 803 WHRECFVCTACKKPLSGQRFTSRDEFAYCLGCFCDLYAKKCTGCANPISAF 955
WH ECFVC C K L+GQRFT+ ++ YC+ C+ + AKKC GC NPI+ F
Sbjct: 197 WHAECFVCVTCSKKLAGQRFTAVEDQYYCVDCYKNFVAKKCAGCKNPITGF 247
Score = 135 bits (341), Expect = 6e-32
Identities = 67/213 (31%), Positives = 95/213 (44%), Gaps = 5/213 (2%)
Frame = +2
Query: 275 FDCHHCENSLFGRKYVLREEQPYCVGCFEALFASTCEECGKLIGCDCKDLSYKDRHWHEA 454
F C C L +V ++ + C C C+ C K I +++ YK WH+
Sbjct: 82 FRCSKCLQPLASETFVAKDNKILCNKCTTREDNPKCKGCLKPIVAGDQNVEYKGTVWHKD 141
Query: 455 CFHCSRCRSSLVDKPFAAKEDQVLCTDCYSQEYSSRCQECRKAIMPGTRKMEYKGSSWHE 634
CF CS C+ + F K + C C+ +++ C +C KAI G + Y+ WH
Sbjct: 142 CFTCSNCKQVIGTGSFFPKGEDFYCVTCHEAKFAKHCVKCNKAITSGG--ITYQDQPWHA 199
Query: 635 TCFTCHRCQQPIGTKSFIPKDGQNFCVPCYEKQHALQCIQCKKPITSGG-----VTYREQ 799
CF C C + + + F + Q +CV CY+ A +C CK PIT G V Y Q
Sbjct: 200 ECFVCVTCSKKLAGQRFTAVEDQYYCVDCYKNFVAKKCAGCKNPITGFGKGSSVVAYEGQ 259
Query: 800 PWHRECFVCTACKKPLSGQRFTSRDEFAYCLGC 898
WH CF C C L+ +RF E YC C
Sbjct: 260 SWHDYCFHCKKCSVNLANKRFVFHQEQVYCPDC 292
Score = 113 bits (283), Expect = 3e-25
Identities = 53/155 (34%), Positives = 76/155 (49%), Gaps = 3/155 (1%)
Frame = +2
Query: 275 FDCHHCENSLFGRKYVLREEQPYCVGCFEALFASTCEECGKLIGCDCKDLSYKDRHWHEA 454
F C +C+ + + + E YCV C EA FA C +C K I ++Y+D+ WH
Sbjct: 143 FTCSNCKQVIGTGSFFPKGEDFYCVTCHEAKFAKHCVKCNKAITSG--GITYQDQPWHAE 200
Query: 455 CFHCSRCRSSLVDKPFAAKEDQVLCTDCYSQEYSSRCQECRKAIM---PGTRKMEYKGSS 625
CF C C L + F A EDQ C DCY + +C C+ I G+ + Y+G S
Sbjct: 201 CFVCVTCSKKLAGQRFTAVEDQYYCVDCYKNFVAKKCAGCKNPITGFGKGSSVVAYEGQS 260
Query: 626 WHETCFTCHRCQQPIGTKSFIPKDGQNFCVPCYEK 730
WH+ CF C +C + K F+ Q +C C +K
Sbjct: 261 WHDYCFHCKKCSVNLANKRFVFHQEQVYCPDCAKK 295
>ref|NP_001029513.1| four and a half LIM domains 1 isoform 3 [Bos taurus].
Length = 194
Score = 188 bits (477), Expect = 1e-47
Identities = 75/174 (43%), Positives = 114/174 (65%)
Frame = +2
Query: 263 MTERFDCHHCENSLFGRKYVLREEQPYCVGCFEALFASTCEECGKLIGCDCKDLSYKDRH 442
M E+FDCH+C ++L G+KYV ++ C+ CF+ A+TC +C K IG D K++ YK+R+
Sbjct: 1 MAEKFDCHYCRDNLQGKKYVQKDGHHCCLKCFDKFCANTCVQCRKPIGADSKEVHYKNRY 60
Query: 443 WHEACFHCSRCRSSLVDKPFAAKEDQVLCTDCYSQEYSSRCQECRKAIMPGTRKMEYKGS 622
WH+ CF CS+C L + F AK++++LC C ++E + +C+ C K I+ G + +EYKG+
Sbjct: 61 WHDTCFRCSKCLQPLASETFVAKDNKILCNKCTTREDNPKCKGCLKPIVAGDQNVEYKGT 120
Query: 623 SWHETCFTCHRCQQPIGTKSFIPKDGQNFCVPCYEKQHALQCIQCKKPITSGGV 784
WH+ CFTC C+Q IGT SF PK +CV C+E + A C++C K + V
Sbjct: 121 VWHKDCFTCSNCKQVIGTGSFFPKGEDFYCVTCHEAKFAKHCVKCNKGLVKAPV 174
Score = 128 bits (322), Expect = 9e-30
Identities = 54/161 (33%), Positives = 87/161 (54%), Gaps = 2/161 (1%)
Frame = +2
Query: 458 FHCSRCRSSLVDKPFAAKEDQVLCTDCYSQEYSSRCQECRKAIMPGTRKMEYKGSSWHET 637
F C CR +L K + K+ C C+ + ++ C +CRK I ++++ YK WH+T
Sbjct: 5 FDCHYCRDNLQGKKYVQKDGHHCCLKCFDKFCANTCVQCRKPIGADSKEVHYKNRYWHDT 64
Query: 638 CFTCHRCQQPIGTKSFIPKDGQNFCVPCYEKQHALQCIQCKKPITSG--GVTYREQPWHR 811
CF C +C QP+ +++F+ KD + C C ++ +C C KPI +G V Y+ WH+
Sbjct: 65 CFRCSKCLQPLASETFVAKDNKILCNKCTTREDNPKCKGCLKPIVAGDQNVEYKGTVWHK 124
Query: 812 ECFVCTACKKPLSGQRFTSRDEFAYCLGCFCDLYAKKCTGC 934
+CF C+ CK+ + F + E YC+ C +AK C C
Sbjct: 125 DCFTCSNCKQVIGTGSFFPKGEDFYCVTCHEAKFAKHCVKC 165
Score = 89.4 bits (220), Expect = 6e-18
Identities = 40/106 (37%), Positives = 58/106 (54%), Gaps = 2/106 (1%)
Frame = +2
Query: 641 FTCHRCQQPIGTKSFIPKDGQNFCVPCYEKQHALQCIQCKKPI--TSGGVTYREQPWHRE 814
F CH C+ + K ++ KDG + C+ C++K A C+QC+KPI S V Y+ + WH
Sbjct: 5 FDCHYCRDNLQGKKYVQKDGHHCCLKCFDKFCANTCVQCRKPIGADSKEVHYKNRYWHDT 64
Query: 815 CFVCTACKKPLSGQRFTSRDEFAYCLGCFCDLYAKKCTGCANPISA 952
CF C+ C +PL+ + F ++D C C KC GC PI A
Sbjct: 65 CFRCSKCLQPLASETFVAKDNKILCNKCTTREDNPKCKGCLKPIVA 110
>ref|XP_002694569.1| PREDICTED: paxillin-like [Bos taurus].
Length = 427
Score = 128 bits (322), Expect = 9e-30
Identities = 66/216 (30%), Positives = 102/216 (47%), Gaps = 1/216 (0%)
Frame = +2
Query: 269 ERFDCHHCENSLFGRKYVLREEQPYCVGCFEALFASTCEEC-GKLIGCDCKDLSYKDRHW 445
E F C HC+ + R + R+ QPYC + LF+ C C G ++ K ++ DR W
Sbjct: 216 EHFVCTHCQEEIGSRNFFERDGQPYCEKDYHNLFSPRCYYCNGPILD---KVVTALDRTW 272
Query: 446 HEACFHCSRCRSSLVDKPFAAKEDQVLCTDCYSQEYSSRCQECRKAIMPGTRKMEYKGSS 625
H F C++C + + F K+ + C Y ++ +C C +AI+ + +
Sbjct: 273 HPEHFFCAQCGAFFGPEGFHEKDGKAYCRKDYFDMFAPKCGGCARAILENY--ISALNTL 330
Query: 626 WHETCFTCHRCQQPIGTKSFIPKDGQNFCVPCYEKQHALQCIQCKKPITSGGVTYREQPW 805
WH CF C C P SF +GQ +C Y ++ C C+KPIT +T + +
Sbjct: 331 WHPECFVCRECFTPFVHGSFFEHEGQPYCEAHYHERRGSLCSGCQKPITGRCITAMAKKF 390
Query: 806 HRECFVCTACKKPLSGQRFTSRDEFAYCLGCFCDLY 913
H E FVC C K L+ F +++ YC CF L+
Sbjct: 391 HPEHFVCAFCLKQLNKGTFKEQNDKPYCQNCFLKLF 426
Score = 92.0 bits (227), Expect = 1e-18
Identities = 44/128 (34%), Positives = 63/128 (49%)
Frame = +2
Query: 563 CQECRKAIMPGTRKMEYKGSSWHETCFTCHRCQQPIGTKSFIPKDGQNFCVPCYEKQHAL 742
C C+K I + + G +WH F C CQ+ IG+++F +DGQ +C Y +
Sbjct: 194 CGACKKPI--AGQVVTAMGKTWHPEHFVCTHCQEEIGSRNFFERDGQPYCEKDYHNLFSP 251
Query: 743 QCIQCKKPITSGGVTYREQPWHRECFVCTACKKPLSGQRFTSRDEFAYCLGCFCDLYAKK 922
+C C PI VT ++ WH E F C C + F +D AYC + D++A K
Sbjct: 252 RCYYCNGPILDKVVTALDRTWHPEHFFCAQCGAFFGPEGFHEKDGKAYCRKDYFDMFAPK 311
Query: 923 CTGCANPI 946
C GCA I
Sbjct: 312 CGGCARAI 319
Score = 91.3 bits (225), Expect = 2e-18
Identities = 47/169 (27%), Positives = 71/169 (42%)
Frame = +2
Query: 443 WHEACFHCSRCRSSLVDKPFAAKEDQVLCTDCYSQEYSSRCQECRKAIMPGTRKMEYKGS 622
WH F C+ C+ + + F ++ Q C Y +S RC C I+ + +
Sbjct: 213 WHPEHFVCTHCQEEIGSRNFFERDGQPYCEKDYHNLFSPRCYYCNGPILD--KVVTALDR 270
Query: 623 SWHETCFTCHRCQQPIGTKSFIPKDGQNFCVPCYEKQHALQCIQCKKPITSGGVTYREQP 802
+WH F C +C G + F KDG+ +C Y A +C C + I ++
Sbjct: 271 TWHPEHFFCAQCGAFFGPEGFHEKDGKAYCRKDYFDMFAPKCGGCARAILENYISALNTL 330
Query: 803 WHRECFVCTACKKPLSGQRFTSRDEFAYCLGCFCDLYAKKCTGCANPIS 949
WH ECFVC C P F + YC + + C+GC PI+
Sbjct: 331 WHPECFVCRECFTPFVHGSFFEHEGQPYCEAHYHERRGSLCSGCQKPIT 379
>ref|XP_595626.4| PREDICTED: paxillin-like [Bos taurus].
Length = 424
Score = 128 bits (322), Expect = 9e-30
Identities = 66/216 (30%), Positives = 102/216 (47%), Gaps = 1/216 (0%)
Frame = +2
Query: 269 ERFDCHHCENSLFGRKYVLREEQPYCVGCFEALFASTCEEC-GKLIGCDCKDLSYKDRHW 445
E F C HC+ + R + R+ QPYC + LF+ C C G ++ K ++ DR W
Sbjct: 213 EHFVCTHCQEEIGSRNFFERDGQPYCEKDYHNLFSPRCYYCNGPILD---KVVTALDRTW 269
Query: 446 HEACFHCSRCRSSLVDKPFAAKEDQVLCTDCYSQEYSSRCQECRKAIMPGTRKMEYKGSS 625
H F C++C + + F K+ + C Y ++ +C C +AI+ + +
Sbjct: 270 HPEHFFCAQCGAFFGPEGFHEKDGKAYCRKDYFDMFAPKCGGCARAILENY--ISALNTL 327
Query: 626 WHETCFTCHRCQQPIGTKSFIPKDGQNFCVPCYEKQHALQCIQCKKPITSGGVTYREQPW 805
WH CF C C P SF +GQ +C Y ++ C C+KPIT +T + +
Sbjct: 328 WHPECFVCRECFTPFVHGSFFEHEGQPYCEAHYHERRGSLCSGCQKPITGRCITAMAKKF 387
Query: 806 HRECFVCTACKKPLSGQRFTSRDEFAYCLGCFCDLY 913
H E FVC C K L+ F +++ YC CF L+
Sbjct: 388 HPEHFVCAFCLKQLNKGTFKEQNDKPYCQNCFLKLF 423
Score = 92.0 bits (227), Expect = 1e-18
Identities = 44/128 (34%), Positives = 63/128 (49%)
Frame = +2
Query: 563 CQECRKAIMPGTRKMEYKGSSWHETCFTCHRCQQPIGTKSFIPKDGQNFCVPCYEKQHAL 742
C C+K I + + G +WH F C CQ+ IG+++F +DGQ +C Y +
Sbjct: 191 CGACKKPI--AGQVVTAMGKTWHPEHFVCTHCQEEIGSRNFFERDGQPYCEKDYHNLFSP 248
Query: 743 QCIQCKKPITSGGVTYREQPWHRECFVCTACKKPLSGQRFTSRDEFAYCLGCFCDLYAKK 922
+C C PI VT ++ WH E F C C + F +D AYC + D++A K
Sbjct: 249 RCYYCNGPILDKVVTALDRTWHPEHFFCAQCGAFFGPEGFHEKDGKAYCRKDYFDMFAPK 308
Query: 923 CTGCANPI 946
C GCA I
Sbjct: 309 CGGCARAI 316
Score = 91.3 bits (225), Expect = 2e-18
Identities = 47/169 (27%), Positives = 71/169 (42%)
Frame = +2
Query: 443 WHEACFHCSRCRSSLVDKPFAAKEDQVLCTDCYSQEYSSRCQECRKAIMPGTRKMEYKGS 622
WH F C+ C+ + + F ++ Q C Y +S RC C I+ + +
Sbjct: 210 WHPEHFVCTHCQEEIGSRNFFERDGQPYCEKDYHNLFSPRCYYCNGPILD--KVVTALDR 267
Query: 623 SWHETCFTCHRCQQPIGTKSFIPKDGQNFCVPCYEKQHALQCIQCKKPITSGGVTYREQP 802
+WH F C +C G + F KDG+ +C Y A +C C + I ++
Sbjct: 268 TWHPEHFFCAQCGAFFGPEGFHEKDGKAYCRKDYFDMFAPKCGGCARAILENYISALNTL 327
Query: 803 WHRECFVCTACKKPLSGQRFTSRDEFAYCLGCFCDLYAKKCTGCANPIS 949
WH ECFVC C P F + YC + + C+GC PI+
Sbjct: 328 WHPECFVCRECFTPFVHGSFFEHEGQPYCEAHYHERRGSLCSGCQKPIT 376
>ref|NP_001124223.1| LIM and senescent cell antigen-like-containing domain protein 2
[Bos taurus].
Length = 341
Score = 114 bits (286), Expect = 1e-25
Identities = 67/230 (29%), Positives = 104/230 (45%), Gaps = 6/230 (2%)
Frame = +2
Query: 275 FDCHHCENSLFGRKYVLREEQPYCVGCFEALFASTCEECGK-LIGCDCKDLSYKDRHWHE 451
F C C + E + YC F+ LFA C CG+ +IG K ++ +WH
Sbjct: 41 FVCAQCFRPFPEGLFYEFEGRKYCEHDFQMLFAPCCGSCGEFIIGRVIKAMN---NNWHP 97
Query: 452 ACFHCSRCRSSLVDKPFAAKEDQVLCTDCYSQEYSSR-----CQECRKAIMPGTRKMEYK 616
CF C C L D F + LC C+++E + CQ C I + + +K
Sbjct: 98 GCFRCELCDVELADLGFVKNAGRHLCRPCHNREKAKGLGKYICQRCHLVI--DEQPLMFK 155
Query: 617 GSSWHETCFTCHRCQQPIGTKSFIPKDGQNFCVPCYEKQHALQCIQCKKPITSGGVTYRE 796
++H F+C C + + ++ K G+ +C+PC++K C C++PI V
Sbjct: 156 NDAYHPDHFSCTHCGKELTAEARELK-GELYCLPCHDKMGVPICGACRRPIEGRVVNALG 214
Query: 797 QPWHRECFVCTACKKPLSGQRFTSRDEFAYCLGCFCDLYAKKCTGCANPI 946
+ WH E FVC C+KP G R + AYC + L+ C C++ I
Sbjct: 215 KQWHVEHFVCAKCEKPFLGHRHYEKKGLAYCETHYNQLFGDVCYTCSHVI 264
Score = 84.0 bits (206), Expect = 3e-16
Identities = 48/200 (24%), Positives = 84/200 (42%), Gaps = 5/200 (2%)
Frame = +2
Query: 362 ALFASTCEECGKLIGCDCKDLSYKDRHWHEACFHCSRCRSSLVDKPFAAKEDQVLCTDCY 541
AL + C+ C + ++ +HE CF C++C + F E + C +
Sbjct: 9 ALANAVCQRCQARFAPAERIVNSNGELYHEHCFVCAQCFRPFPEGLFYEFEGRKYCEHDF 68
Query: 542 SQEYSSRCQECRKAIMPGTRKMEYKGSSWHETCFTCHRCQQPIGTKSFIPKDGQNFCVPC 721
++ C C + I+ R ++ ++WH CF C C + F+ G++ C PC
Sbjct: 69 QMLFAPCCGSCGEFII--GRVIKAMNNNWHPGCFRCELCDVELADLGFVKNAGRHLCRPC 126
Query: 722 YEKQHA-----LQCIQCKKPITSGGVTYREQPWHRECFVCTACKKPLSGQRFTSRDEFAY 886
+ ++ A C +C I + ++ +H + F CT C K L+ + + E Y
Sbjct: 127 HNREKAKGLGKYICQRCHLVIDEQPLMFKNDAYHPDHFSCTHCGKELTAEARELKGEL-Y 185
Query: 887 CLGCFCDLYAKKCTGCANPI 946
CL C + C C PI
Sbjct: 186 CLPCHDKMGVPICGACRRPI 205
Score = 71.2 bits (173), Expect = 2e-12
Identities = 52/215 (24%), Positives = 81/215 (37%), Gaps = 6/215 (2%)
Frame = +2
Query: 275 FDCHHCENSLFGRKYVLREEQPYCVGCF-----EALFASTCEECGKLIGCDCKDLSYKDR 439
F C C+ L +V + C C + L C+ C +I D + L +K+
Sbjct: 100 FRCELCDVELADLGFVKNAGRHLCRPCHNREKAKGLGKYICQRCHLVI--DEQPLMFKND 157
Query: 440 HWHEACFHCSRCRSSLVDKPFAAKEDQVLCTDCYSQEYSSRCQECRKAIMPGTRKMEYKG 619
+H F C+ C L + K ++ C C+ + C CR+ I R + G
Sbjct: 158 AYHPDHFSCTHCGKELTAEARELK-GELYCLPCHDKMGVPICGACRRPIEG--RVVNALG 214
Query: 620 SSWHETCFTCHRCQQPIGTKSFIPKDGQNFCVPCYEKQHALQCIQCKKPITSGGVTYREQ 799
WH F C +C++P K G +C Y + C C I V+ +
Sbjct: 215 KQWHVEHFVCAKCEKPFLGHRHYEKKGLAYCETHYNQLFGDVCYTCSHVIEGDVVSALNK 274
Query: 800 PWHRECFVCTACKKPLS-GQRFTSRDEFAYCLGCF 901
W CF C+ C L+ +F D C C+
Sbjct: 275 AWCVHCFSCSTCNSRLTLKNKFVEFDMKPVCKRCY 309
Score = 52.4 bits (124), Expect = 8e-07
Identities = 33/122 (27%), Positives = 50/122 (40%), Gaps = 1/122 (0%)
Frame = +2
Query: 269 ERFDCHHCENSLFGRKYVLREEQPYCVGCFEALFASTCEECGKLIGCDCKDLSYKDRHWH 448
E F C CE G ++ ++ YC + LF C C +I D +S ++ W
Sbjct: 220 EHFVCAKCEKPFLGHRHYEKKGLAYCETHYNQLFGDVCYTCSHVIEGDV--VSALNKAWC 277
Query: 449 EACFHCSRCRSSLVDK-PFAAKEDQVLCTDCYSQEYSSRCQECRKAIMPGTRKMEYKGSS 625
CF CS C S L K F + + +C CY + + +K R+ + K S
Sbjct: 278 VHCFSCSTCNSRLTLKNKFVEFDMKPVCKRCYEKFPLELKKRLKKLSELAARRAQPKSSG 337
Query: 626 WH 631
H
Sbjct: 338 LH 339
>ref|NP_001076964.1| LIM and senescent cell antigen-like domains 3-like [Bos taurus].
Length = 337
Score = 114 bits (285), Expect = 2e-25
Identities = 67/226 (29%), Positives = 99/226 (43%), Gaps = 6/226 (2%)
Frame = +2
Query: 275 FDCHHCENSLFGRKYVLREEQPYCVGCFEALFASTCEECGK-LIGCDCKDLSYKDRHWHE 451
F C C + E + YC F+ LFA C +CG+ +IG K ++ WH
Sbjct: 48 FVCAQCFQQFPEGLFYEFEGRKYCEHDFQMLFAPCCHQCGEFIIGRVIKAMN---NSWHP 104
Query: 452 ACFHCSRCRSSLVDKPFAAKEDQVLCTDCYSQEYSSR-----CQECRKAIMPGTRKMEYK 616
CF C C+ L D F + LC C+++E + CQ+C I + + +K
Sbjct: 105 ECFRCDLCQEVLADIGFVKNAGRHLCRPCHNREKARGLGKYICQKCHAII--DEQPLIFK 162
Query: 617 GSSWHETCFTCHRCQQPIGTKSFIPKDGQNFCVPCYEKQHALQCIQCKKPITSGGVTYRE 796
+H F C C + + T G+ +C+PC++K C C++PI V
Sbjct: 163 NDPYHPDHFNCANCGKEL-TADARELKGELYCLPCHDKMGVPICGACRRPIEGRVVNAMG 221
Query: 797 QPWHRECFVCTACKKPLSGQRFTSRDEFAYCLGCFCDLYAKKCTGC 934
+ WH E FVC C+KP G R R AYC + L+ C C
Sbjct: 222 KQWHVEHFVCAKCEKPFLGHRHYERKGLAYCETHYNQLFGDVCFHC 267
Score = 92.0 bits (227), Expect = 1e-18
Identities = 52/200 (26%), Positives = 87/200 (43%), Gaps = 5/200 (2%)
Frame = +2
Query: 362 ALFASTCEECGKLIGCDCKDLSYKDRHWHEACFHCSRCRSSLVDKPFAAKEDQVLCTDCY 541
AL ++CE C K ++ +HE CF C++C + F E + C +
Sbjct: 16 ALANASCERCRGGFAPAEKIVNSNGELYHEQCFVCAQCFQQFPEGLFYEFEGRKYCEHDF 75
Query: 542 SQEYSSRCQECRKAIMPGTRKMEYKGSSWHETCFTCHRCQQPIGTKSFIPKDGQNFCVPC 721
++ C +C + I+ R ++ +SWH CF C CQ+ + F+ G++ C PC
Sbjct: 76 QMLFAPCCHQCGEFII--GRVIKAMNNSWHPECFRCDLCQEVLADIGFVKNAGRHLCRPC 133
Query: 722 YEKQHA-----LQCIQCKKPITSGGVTYREQPWHRECFVCTACKKPLSGQRFTSRDEFAY 886
+ ++ A C +C I + ++ P+H + F C C K L+ + E Y
Sbjct: 134 HNREKARGLGKYICQKCHAIIDEQPLIFKNDPYHPDHFNCANCGKELTADARELKGEL-Y 192
Query: 887 CLGCFCDLYAKKCTGCANPI 946
CL C + C C PI
Sbjct: 193 CLPCHDKMGVPICGACRRPI 212
Score = 73.9 bits (180), Expect = 3e-13
Identities = 52/217 (23%), Positives = 83/217 (38%), Gaps = 6/217 (2%)
Frame = +2
Query: 269 ERFDCHHCENSLFGRKYVLREEQPYCVGCFE-----ALFASTCEECGKLIGCDCKDLSYK 433
E F C C+ L +V + C C L C++C +I D + L +K
Sbjct: 105 ECFRCDLCQEVLADIGFVKNAGRHLCRPCHNREKARGLGKYICQKCHAII--DEQPLIFK 162
Query: 434 DRHWHEACFHCSRCRSSLVDKPFAAKEDQVLCTDCYSQEYSSRCQECRKAIMPGTRKMEY 613
+ +H F+C+ C L K ++ C C+ + C CR+ I R +
Sbjct: 163 NDPYHPDHFNCANCGKELTADARELK-GELYCLPCHDKMGVPICGACRRPIEG--RVVNA 219
Query: 614 KGSSWHETCFTCHRCQQPIGTKSFIPKDGQNFCVPCYEKQHALQCIQCKKPITSGGVTYR 793
G WH F C +C++P + G +C Y + C C + I V+
Sbjct: 220 MGKQWHVEHFVCAKCEKPFLGHRHYERKGLAYCETHYNQLFGDVCFHCNRVIEGDVVSAL 279
Query: 794 EQPWHRECFVCTACKKPLS-GQRFTSRDEFAYCLGCF 901
+ W CF C+ C L+ +F D C C+
Sbjct: 280 NKAWCVHCFACSTCSAKLTLKNKFVEFDMKPVCKKCY 316
Database: RefSeq49_BP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 17,681,374
Number of sequences in database: 33,088
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33088
Number of Hits to DB: 43,919,526
Number of extensions: 1236539
Number of successful extensions: 11308
Number of sequences better than 1.0e-05: 98
Number of HSP's gapped: 8228
Number of HSP's successfully gapped: 192
Length of query: 414
Length of database: 17,681,374
Length adjustment: 105
Effective length of query: 309
Effective length of database: 14,207,134
Effective search space: 4390004406
Effective search space used: 4390004406
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to RefSeqCP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-014700
(1244 letters)
Database: RefSeq49_CP.fasta
33,336 sequences; 18,874,504 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_531773.2| PREDICTED: similar to four and a half LIM domai... 484 e-137
Alignment gi|XP_532237.2| PREDICTED: similar to activator of cAMP-respons... 324 9e-89
Alignment gi|XP_850071.1| PREDICTED: similar to four and a half LIM domai... 315 7e-86
Alignment gi|XP_866308.1| PREDICTED: similar to four and a half LIM domai... 278 1e-74
Alignment gi|XP_866275.1| PREDICTED: similar to four and a half LIM domai... 278 1e-74
Alignment gi|XP_549282.2| PREDICTED: similar to Four and a half LIM domai... 275 5e-74
Alignment gi|XP_866244.1| PREDICTED: similar to four and a half LIM domai... 189 6e-48
Alignment gi|XP_866260.1| PREDICTED: similar to Four and a half LIM domai... 159 5e-39
Alignment gi|XP_543425.2| PREDICTED: similar to Paxillin [Canis familiari... 130 3e-30
Alignment gi|XP_852227.1| PREDICTED: similar to LIM and senescent cell an... 115 9e-26
>ref|XP_531773.2| PREDICTED: similar to four and a half LIM domains 2 isoform 1
[Canis familiaris].
Length = 424
Score = 484 bits (1247), Expect = e-137
Identities = 208/229 (90%), Positives = 218/229 (95%)
Frame = +2
Query: 263 MTERFDCHHCENSLFGRKYVLREEQPYCVGCFEALFASTCEECGKLIGCDCKDLSYKDRH 442
MTERFDCHHCE SLFG+KY+LREE PYCV CFEAL+ASTCEECGK IGCDCKDLSYKDRH
Sbjct: 146 MTERFDCHHCEKSLFGKKYILREESPYCVACFEALYASTCEECGKPIGCDCKDLSYKDRH 205
Query: 443 WHEACFHCSRCRSSLVDKPFAAKEDQVLCTDCYSQEYSSRCQECRKAIMPGTRKMEYKGS 622
WHEACFHCSRC+SSLVDKPFAAKEDQ+LCTDCYS EYSS+CQEC+K IMPGTRKMEYK S
Sbjct: 206 WHEACFHCSRCKSSLVDKPFAAKEDQLLCTDCYSHEYSSKCQECKKTIMPGTRKMEYKDS 265
Query: 623 SWHETCFTCHRCQQPIGTKSFIPKDGQNFCVPCYEKQHALQCIQCKKPITSGGVTYREQP 802
SWHETCFTCHRCQQPIGTKSFIPKD QNFCVPCYEKQ+ALQC+QCKKPIT+GGVTYREQP
Sbjct: 266 SWHETCFTCHRCQQPIGTKSFIPKDNQNFCVPCYEKQYALQCVQCKKPITTGGVTYREQP 325
Query: 803 WHRECFVCTACKKPLSGQRFTSRDEFAYCLGCFCDLYAKKCTGCANPIS 949
WHRECFVCTACKKPLSGQRFTSRDEFAYCL CFCDLYAKKC GC NPIS
Sbjct: 326 WHRECFVCTACKKPLSGQRFTSRDEFAYCLSCFCDLYAKKCAGCTNPIS 374
Score = 165 bits (418), Expect = 7e-41
Identities = 70/216 (32%), Positives = 114/216 (52%), Gaps = 4/216 (1%)
Frame = +2
Query: 275 FDCHHCENSLFGRKYVLREEQPYCVGCFEALFASTCEECGKLIGCDCKDLSYKDRHWHEA 454
F C C++SL + + +E+Q C C+ ++S C+EC K I + + YKD WHE
Sbjct: 211 FHCSRCKSSLVDKPFAAKEDQLLCTDCYSHEYSSKCQECKKTIMPGTRKMEYKDSSWHET 270
Query: 455 CFHCSRCRSSLVDKPFAAKEDQVLCTDCYSQEYSSRCQECRKAIMPGTRKMEYKGSSWHE 634
CF C RC+ + K F K++Q C CY ++Y+ +C +C+K I G + Y+ WH
Sbjct: 271 CFTCHRCQQPIGTKSFIPKDNQNFCVPCYEKQYALQCVQCKKPITTGG--VTYREQPWHR 328
Query: 635 TCFTCHRCQQPIGTKSFIPKDGQNFCVPCYEKQHALQCIQCKKPITSGG----VTYREQP 802
CF C C++P+ + F +D +C+ C+ +A +C C PI+ G +++ E+
Sbjct: 329 ECFVCTACKKPLSGQRFTSRDEFAYCLSCFCDLYAKKCAGCTNPISGLGGTKYISFEERQ 388
Query: 803 WHRECFVCTACKKPLSGQRFTSRDEFAYCLGCFCDL 910
WH +CF C C L G+ F + + C C D+
Sbjct: 389 WHNDCFNCKKCSLSLVGRGFLTERDDILCPDCGKDI 424
Score = 79.0 bits (193), Expect = 9e-15
Identities = 35/92 (38%), Positives = 51/92 (55%), Gaps = 2/92 (2%)
Frame = +2
Query: 269 ERFDCHHCENSLFGRKYVLREEQPYCVGCFEALFASTCEECGKLIGC--DCKDLSYKDRH 442
E F C C+ L G+++ R+E YC+ CF L+A C C I K +S+++R
Sbjct: 329 ECFVCTACKKPLSGQRFTSRDEFAYCLSCFCDLYAKKCAGCTNPISGLGGTKYISFEERQ 388
Query: 443 WHEACFHCSRCRSSLVDKPFAAKEDQVLCTDC 538
WH CF+C +C SLV + F + D +LC DC
Sbjct: 389 WHNDCFNCKKCSLSLVGRGFLTERDDILCPDC 420
>ref|XP_532237.2| PREDICTED: similar to activator of cAMP-responsive element
modulator (CREM) in testis [Canis familiaris].
Length = 284
Score = 324 bits (831), Expect = 9e-89
Identities = 131/228 (57%), Positives = 173/228 (75%)
Frame = +2
Query: 266 TERFDCHHCENSLFGRKYVLREEQPYCVGCFEALFASTCEECGKLIGCDCKDLSYKDRHW 445
T RFDC +C SL G+KYVL+ + PYCV C++ +F++ CEEC + I D KDL YK RHW
Sbjct: 3 TARFDCQYCTASLLGKKYVLKNDNPYCVSCYDRIFSNYCEECKEPIESDSKDLCYKGRHW 62
Query: 446 HEACFHCSRCRSSLVDKPFAAKEDQVLCTDCYSQEYSSRCQECRKAIMPGTRKMEYKGSS 625
HE CF+C++C SLV+KPFAAK++++LC++CYS E SS+C C+K IMPG+RKME+KG+
Sbjct: 63 HEGCFNCAKCNHSLVEKPFAAKDERLLCSECYSNECSSKCFHCKKTIMPGSRKMEFKGNY 122
Query: 626 WHETCFTCHRCQQPIGTKSFIPKDGQNFCVPCYEKQHALQCIQCKKPITSGGVTYREQPW 805
WHETCF C C+QPIGTK I KD N+CVPC+EK+ A C CKK ITSGG+T+ +QPW
Sbjct: 123 WHETCFVCEHCRQPIGTKPLISKDNGNYCVPCFEKEFAHYCSFCKKVITSGGITFHDQPW 182
Query: 806 HRECFVCTACKKPLSGQRFTSRDEFAYCLGCFCDLYAKKCTGCANPIS 949
H+ECF+C+ C+K L + F SRD++ +CL C+ LYAKKC C PI+
Sbjct: 183 HKECFLCSGCRKELCEEEFMSRDDYPFCLDCYNHLYAKKCAACNKPIT 230
Score = 151 bits (382), Expect = 1e-36
Identities = 64/212 (30%), Positives = 110/212 (51%), Gaps = 4/212 (1%)
Frame = +2
Query: 275 FDCHHCENSLFGRKYVLREEQPYCVGCFEALFASTCEECGKLIGCDCKDLSYKDRHWHEA 454
F+C C +SL + + ++E+ C C+ +S C C K I + + +K +WHE
Sbjct: 67 FNCAKCNHSLVEKPFAAKDERLLCSECYSNECSSKCFHCKKTIMPGSRKMEFKGNYWHET 126
Query: 455 CFHCSRCRSSLVDKPFAAKEDQVLCTDCYSQEYSSRCQECRKAIMPGTRKMEYKGSSWHE 634
CF C CR + KP +K++ C C+ +E++ C C+K I G + + WH+
Sbjct: 127 CFVCEHCRQPIGTKPLISKDNGNYCVPCFEKEFAHYCSFCKKVITSGG--ITFHDQPWHK 184
Query: 635 TCFTCHRCQQPIGTKSFIPKDGQNFCVPCYEKQHALQCIQCKKPIT----SGGVTYREQP 802
CF C C++ + + F+ +D FC+ CY +A +C C KPIT + + ++++
Sbjct: 185 ECFLCSGCRKELCEEEFMSRDDYPFCLDCYNHLYAKKCAACNKPITGLRGAKFICFQDRQ 244
Query: 803 WHRECFVCTACKKPLSGQRFTSRDEFAYCLGC 898
WH ECF C C L G+ F ++++ +C C
Sbjct: 245 WHSECFNCGKCSVSLVGEGFLTQNKEIFCRKC 276
Score = 134 bits (338), Expect = 1e-31
Identities = 58/169 (34%), Positives = 89/169 (52%), Gaps = 2/169 (1%)
Frame = +2
Query: 452 ACFHCSRCRSSLVDKPFAAKEDQVLCTDCYSQEYSSRCQECRKAIMPGTRKMEYKGSSWH 631
A F C C +SL+ K + K D C CY + +S+ C+EC++ I ++ + YKG WH
Sbjct: 4 ARFDCQYCTASLLGKKYVLKNDNPYCVSCYDRIFSNYCEECKEPIESDSKDLCYKGRHWH 63
Query: 632 ETCFTCHRCQQPIGTKSFIPKDGQNFCVPCYEKQHALQCIQCKKPITSGG--VTYREQPW 805
E CF C +C + K F KD + C CY + + +C CKK I G + ++ W
Sbjct: 64 EGCFNCAKCNHSLVEKPFAAKDERLLCSECYSNECSSKCFHCKKTIMPGSRKMEFKGNYW 123
Query: 806 HRECFVCTACKKPLSGQRFTSRDEFAYCLGCFCDLYAKKCTGCANPISA 952
H CFVC C++P+ + S+D YC+ CF +A C+ C I++
Sbjct: 124 HETCFVCEHCRQPIGTKPLISKDNGNYCVPCFEKEFAHYCSFCKKVITS 172
Score = 73.2 bits (178), Expect = 5e-13
Identities = 31/94 (32%), Positives = 49/94 (52%), Gaps = 2/94 (2%)
Frame = +2
Query: 269 ERFDCHHCENSLFGRKYVLREEQPYCVGCFEALFASTCEECGKLIGC--DCKDLSYKDRH 442
E F C C L +++ R++ P+C+ C+ L+A C C K I K + ++DR
Sbjct: 185 ECFLCSGCRKELCEEEFMSRDDYPFCLDCYNHLYAKKCAACNKPITGLRGAKFICFQDRQ 244
Query: 443 WHEACFHCSRCRSSLVDKPFAAKEDQVLCTDCYS 544
WH CF+C +C SLV + F + ++ C C S
Sbjct: 245 WHSECFNCGKCSVSLVGEGFLTQNKEIFCRKCGS 278
>ref|XP_850071.1| PREDICTED: similar to four and a half LIM domains 3 [Canis
familiaris].
Length = 309
Score = 315 bits (806), Expect = 7e-86
Identities = 123/229 (53%), Positives = 171/229 (74%)
Frame = +2
Query: 263 MTERFDCHHCENSLFGRKYVLREEQPYCVGCFEALFASTCEECGKLIGCDCKDLSYKDRH 442
M+E FDC C SL+GRKY+ ++ PYCV C+++ FA+TC EC +LIG D ++L Y+DRH
Sbjct: 30 MSEAFDCAKCSESLYGRKYIQTDDGPYCVPCYDSTFANTCAECQQLIGHDSRELFYEDRH 89
Query: 443 WHEACFHCSRCRSSLVDKPFAAKEDQVLCTDCYSQEYSSRCQECRKAIMPGTRKMEYKGS 622
+HE CF C RC+ SL D+PF ++ ++LC DCY +SS+C C + +MPG+RK+EY G
Sbjct: 90 FHEGCFRCCRCQRSLADEPFTCQDSELLCNDCYCSAFSSQCSACGETVMPGSRKLEYGGQ 149
Query: 623 SWHETCFTCHRCQQPIGTKSFIPKDGQNFCVPCYEKQHALQCIQCKKPITSGGVTYREQP 802
+WHE CF C C+QP+G++SF+P G ++CVPCYE + A +C +C K +T GGVTYR+QP
Sbjct: 150 TWHEHCFLCSGCEQPLGSRSFVPDKGAHYCVPCYENKFAPRCARCSKTLTQGGVTYRDQP 209
Query: 803 WHRECFVCTACKKPLSGQRFTSRDEFAYCLGCFCDLYAKKCTGCANPIS 949
WHREC VCT C+ PL+GQ+FTSRD+ YC+ CF +L+A KC+ C PI+
Sbjct: 210 WHRECLVCTGCQTPLAGQQFTSRDDDPYCVACFGELFAPKCSSCKRPIT 258
>ref|XP_866308.1| PREDICTED: similar to four and a half LIM domains 1 isoform 6
[Canis familiaris].
Length = 296
Score = 278 bits (710), Expect = 1e-74
Identities = 113/231 (48%), Positives = 161/231 (69%)
Frame = +2
Query: 263 MTERFDCHHCENSLFGRKYVLREEQPYCVGCFEALFASTCEECGKLIGCDCKDLSYKDRH 442
MTE+FDCH+C +SL G+KYV ++ C+ CF+ A+TC EC K IG D K++ YK+R+
Sbjct: 17 MTEKFDCHYCRDSLQGKKYVQKDGHHCCLKCFDKFCANTCVECRKPIGADSKEVHYKNRY 76
Query: 443 WHEACFHCSRCRSSLVDKPFAAKEDQVLCTDCYSQEYSSRCQECRKAIMPGTRKMEYKGS 622
WH+ CF C++C L ++ F AK++++LC C ++E S +C+ C K I+ G + +EYK +
Sbjct: 77 WHDTCFRCAKCLHPLANETFVAKDNKILCNKCTTREDSPKCKGCFKPIVAGDQNVEYKKT 136
Query: 623 SWHETCFTCHRCQQPIGTKSFIPKDGQNFCVPCYEKQHALQCIQCKKPITSGGVTYREQP 802
WH+ CFTC C+Q IGT SF PK +CV C+E + A C++C K ITSGG+TY++QP
Sbjct: 137 VWHKDCFTCSNCKQVIGTGSFFPKGEDFYCVTCHETKFAKHCVKCNKAITSGGITYQDQP 196
Query: 803 WHRECFVCTACKKPLSGQRFTSRDEFAYCLGCFCDLYAKKCTGCANPISAF 955
WH ECFVC C K L+GQRFT+ ++ YC+ C+ + AKKC GC NPI+ F
Sbjct: 197 WHAECFVCVTCSKKLAGQRFTAVEDQYYCVDCYKNFVAKKCAGCKNPITGF 247
Score = 138 bits (348), Expect = 1e-32
Identities = 67/213 (31%), Positives = 98/213 (46%), Gaps = 5/213 (2%)
Frame = +2
Query: 275 FDCHHCENSLFGRKYVLREEQPYCVGCFEALFASTCEECGKLIGCDCKDLSYKDRHWHEA 454
F C C + L +V ++ + C C + C+ C K I +++ YK WH+
Sbjct: 82 FRCAKCLHPLANETFVAKDNKILCNKCTTREDSPKCKGCFKPIVAGDQNVEYKKTVWHKD 141
Query: 455 CFHCSRCRSSLVDKPFAAKEDQVLCTDCYSQEYSSRCQECRKAIMPGTRKMEYKGSSWHE 634
CF CS C+ + F K + C C+ +++ C +C KAI G + Y+ WH
Sbjct: 142 CFTCSNCKQVIGTGSFFPKGEDFYCVTCHETKFAKHCVKCNKAITSGG--ITYQDQPWHA 199
Query: 635 TCFTCHRCQQPIGTKSFIPKDGQNFCVPCYEKQHALQCIQCKKPITSGG-----VTYREQ 799
CF C C + + + F + Q +CV CY+ A +C CK PIT G V Y Q
Sbjct: 200 ECFVCVTCSKKLAGQRFTAVEDQYYCVDCYKNFVAKKCAGCKNPITGFGKGSSVVAYEGQ 259
Query: 800 PWHRECFVCTACKKPLSGQRFTSRDEFAYCLGC 898
WH CF C C L+ +RF +E YC C
Sbjct: 260 SWHDYCFHCKKCSMNLANKRFVFHEEQVYCPDC 292
Score = 114 bits (284), Expect = 3e-25
Identities = 55/169 (32%), Positives = 80/169 (47%), Gaps = 3/169 (1%)
Frame = +2
Query: 233 QTRWQKSSTKMTERFDCHHCENSLFGRKYVLREEQPYCVGCFEALFASTCEECGKLIGCD 412
+T W K F C +C+ + + + E YCV C E FA C +C K I
Sbjct: 135 KTVWHKDC------FTCSNCKQVIGTGSFFPKGEDFYCVTCHETKFAKHCVKCNKAITSG 188
Query: 413 CKDLSYKDRHWHEACFHCSRCRSSLVDKPFAAKEDQVLCTDCYSQEYSSRCQECRKAIM- 589
++Y+D+ WH CF C C L + F A EDQ C DCY + +C C+ I
Sbjct: 189 --GITYQDQPWHAECFVCVTCSKKLAGQRFTAVEDQYYCVDCYKNFVAKKCAGCKNPITG 246
Query: 590 --PGTRKMEYKGSSWHETCFTCHRCQQPIGTKSFIPKDGQNFCVPCYEK 730
G+ + Y+G SWH+ CF C +C + K F+ + Q +C C +K
Sbjct: 247 FGKGSSVVAYEGQSWHDYCFHCKKCSMNLANKRFVFHEEQVYCPDCAKK 295
>ref|XP_866275.1| PREDICTED: similar to four and a half LIM domains 1 isoform 5
[Canis familiaris].
Length = 280
Score = 278 bits (710), Expect = 1e-74
Identities = 113/231 (48%), Positives = 161/231 (69%)
Frame = +2
Query: 263 MTERFDCHHCENSLFGRKYVLREEQPYCVGCFEALFASTCEECGKLIGCDCKDLSYKDRH 442
MTE+FDCH+C +SL G+KYV ++ C+ CF+ A+TC EC K IG D K++ YK+R+
Sbjct: 1 MTEKFDCHYCRDSLQGKKYVQKDGHHCCLKCFDKFCANTCVECRKPIGADSKEVHYKNRY 60
Query: 443 WHEACFHCSRCRSSLVDKPFAAKEDQVLCTDCYSQEYSSRCQECRKAIMPGTRKMEYKGS 622
WH+ CF C++C L ++ F AK++++LC C ++E S +C+ C K I+ G + +EYK +
Sbjct: 61 WHDTCFRCAKCLHPLANETFVAKDNKILCNKCTTREDSPKCKGCFKPIVAGDQNVEYKKT 120
Query: 623 SWHETCFTCHRCQQPIGTKSFIPKDGQNFCVPCYEKQHALQCIQCKKPITSGGVTYREQP 802
WH+ CFTC C+Q IGT SF PK +CV C+E + A C++C K ITSGG+TY++QP
Sbjct: 121 VWHKDCFTCSNCKQVIGTGSFFPKGEDFYCVTCHETKFAKHCVKCNKAITSGGITYQDQP 180
Query: 803 WHRECFVCTACKKPLSGQRFTSRDEFAYCLGCFCDLYAKKCTGCANPISAF 955
WH ECFVC C K L+GQRFT+ ++ YC+ C+ + AKKC GC NPI+ F
Sbjct: 181 WHAECFVCVTCSKKLAGQRFTAVEDQYYCVDCYKNFVAKKCAGCKNPITGF 231
Score = 138 bits (348), Expect = 1e-32
Identities = 67/213 (31%), Positives = 98/213 (46%), Gaps = 5/213 (2%)
Frame = +2
Query: 275 FDCHHCENSLFGRKYVLREEQPYCVGCFEALFASTCEECGKLIGCDCKDLSYKDRHWHEA 454
F C C + L +V ++ + C C + C+ C K I +++ YK WH+
Sbjct: 66 FRCAKCLHPLANETFVAKDNKILCNKCTTREDSPKCKGCFKPIVAGDQNVEYKKTVWHKD 125
Query: 455 CFHCSRCRSSLVDKPFAAKEDQVLCTDCYSQEYSSRCQECRKAIMPGTRKMEYKGSSWHE 634
CF CS C+ + F K + C C+ +++ C +C KAI G + Y+ WH
Sbjct: 126 CFTCSNCKQVIGTGSFFPKGEDFYCVTCHETKFAKHCVKCNKAITSGG--ITYQDQPWHA 183
Query: 635 TCFTCHRCQQPIGTKSFIPKDGQNFCVPCYEKQHALQCIQCKKPITSGG-----VTYREQ 799
CF C C + + + F + Q +CV CY+ A +C CK PIT G V Y Q
Sbjct: 184 ECFVCVTCSKKLAGQRFTAVEDQYYCVDCYKNFVAKKCAGCKNPITGFGKGSSVVAYEGQ 243
Query: 800 PWHRECFVCTACKKPLSGQRFTSRDEFAYCLGC 898
WH CF C C L+ +RF +E YC C
Sbjct: 244 SWHDYCFHCKKCSMNLANKRFVFHEEQVYCPDC 276
Score = 114 bits (284), Expect = 3e-25
Identities = 55/169 (32%), Positives = 80/169 (47%), Gaps = 3/169 (1%)
Frame = +2
Query: 233 QTRWQKSSTKMTERFDCHHCENSLFGRKYVLREEQPYCVGCFEALFASTCEECGKLIGCD 412
+T W K F C +C+ + + + E YCV C E FA C +C K I
Sbjct: 119 KTVWHKDC------FTCSNCKQVIGTGSFFPKGEDFYCVTCHETKFAKHCVKCNKAITSG 172
Query: 413 CKDLSYKDRHWHEACFHCSRCRSSLVDKPFAAKEDQVLCTDCYSQEYSSRCQECRKAIM- 589
++Y+D+ WH CF C C L + F A EDQ C DCY + +C C+ I
Sbjct: 173 --GITYQDQPWHAECFVCVTCSKKLAGQRFTAVEDQYYCVDCYKNFVAKKCAGCKNPITG 230
Query: 590 --PGTRKMEYKGSSWHETCFTCHRCQQPIGTKSFIPKDGQNFCVPCYEK 730
G+ + Y+G SWH+ CF C +C + K F+ + Q +C C +K
Sbjct: 231 FGKGSSVVAYEGQSWHDYCFHCKKCSMNLANKRFVFHEEQVYCPDCAKK 279
>ref|XP_549282.2| PREDICTED: similar to Four and a half LIM domains protein 1 (FHL-1)
(Skeletal muscle LIM-protein 1) (SLIM 1) (SLIM) isoform
1 [Canis familiaris].
Length = 339
Score = 275 bits (704), Expect = 5e-74
Identities = 112/229 (48%), Positives = 160/229 (69%)
Frame = +2
Query: 263 MTERFDCHHCENSLFGRKYVLREEQPYCVGCFEALFASTCEECGKLIGCDCKDLSYKDRH 442
MTE+FDCH+C +SL G+KYV ++ C+ CF+ A+TC EC K IG D K++ YK+R+
Sbjct: 17 MTEKFDCHYCRDSLQGKKYVQKDGHHCCLKCFDKFCANTCVECRKPIGADSKEVHYKNRY 76
Query: 443 WHEACFHCSRCRSSLVDKPFAAKEDQVLCTDCYSQEYSSRCQECRKAIMPGTRKMEYKGS 622
WH+ CF C++C L ++ F AK++++LC C ++E S +C+ C K I+ G + +EYK +
Sbjct: 77 WHDTCFRCAKCLHPLANETFVAKDNKILCNKCTTREDSPKCKGCFKPIVAGDQNVEYKKT 136
Query: 623 SWHETCFTCHRCQQPIGTKSFIPKDGQNFCVPCYEKQHALQCIQCKKPITSGGVTYREQP 802
WH+ CFTC C+Q IGT SF PK +CV C+E + A C++C K ITSGG+TY++QP
Sbjct: 137 VWHKDCFTCSNCKQVIGTGSFFPKGEDFYCVTCHETKFAKHCVKCNKAITSGGITYQDQP 196
Query: 803 WHRECFVCTACKKPLSGQRFTSRDEFAYCLGCFCDLYAKKCTGCANPIS 949
WH ECFVC C K L+GQRFT+ ++ YC+ C+ + AKKC GC NPI+
Sbjct: 197 WHAECFVCVTCSKKLAGQRFTAVEDQYYCVDCYKNFVAKKCAGCKNPIT 245
Score = 131 bits (330), Expect = 1e-30
Identities = 56/167 (33%), Positives = 90/167 (53%), Gaps = 2/167 (1%)
Frame = +2
Query: 458 FHCSRCRSSLVDKPFAAKEDQVLCTDCYSQEYSSRCQECRKAIMPGTRKMEYKGSSWHET 637
F C CR SL K + K+ C C+ + ++ C ECRK I ++++ YK WH+T
Sbjct: 21 FDCHYCRDSLQGKKYVQKDGHHCCLKCFDKFCANTCVECRKPIGADSKEVHYKNRYWHDT 80
Query: 638 CFTCHRCQQPIGTKSFIPKDGQNFCVPCYEKQHALQCIQCKKPITSG--GVTYREQPWHR 811
CF C +C P+ ++F+ KD + C C ++ + +C C KPI +G V Y++ WH+
Sbjct: 81 CFRCAKCLHPLANETFVAKDNKILCNKCTTREDSPKCKGCFKPIVAGDQNVEYKKTVWHK 140
Query: 812 ECFVCTACKKPLSGQRFTSRDEFAYCLGCFCDLYAKKCTGCANPISA 952
+CF C+ CK+ + F + E YC+ C +AK C C I++
Sbjct: 141 DCFTCSNCKQVIGTGSFFPKGEDFYCVTCHETKFAKHCVKCNKAITS 187
>ref|XP_866244.1| PREDICTED: similar to four and a half LIM domains 1 isoform 3
[Canis familiaris].
Length = 210
Score = 189 bits (479), Expect = 6e-48
Identities = 77/174 (44%), Positives = 115/174 (66%)
Frame = +2
Query: 263 MTERFDCHHCENSLFGRKYVLREEQPYCVGCFEALFASTCEECGKLIGCDCKDLSYKDRH 442
MTE+FDCH+C +SL G+KYV ++ C+ CF+ A+TC EC K IG D K++ YK+R+
Sbjct: 17 MTEKFDCHYCRDSLQGKKYVQKDGHHCCLKCFDKFCANTCVECRKPIGADSKEVHYKNRY 76
Query: 443 WHEACFHCSRCRSSLVDKPFAAKEDQVLCTDCYSQEYSSRCQECRKAIMPGTRKMEYKGS 622
WH+ CF C++C L ++ F AK++++LC C ++E S +C+ C K I+ G + +EYK +
Sbjct: 77 WHDTCFRCAKCLHPLANETFVAKDNKILCNKCTTREDSPKCKGCFKPIVAGDQNVEYKKT 136
Query: 623 SWHETCFTCHRCQQPIGTKSFIPKDGQNFCVPCYEKQHALQCIQCKKPITSGGV 784
WH+ CFTC C+Q IGT SF PK +CV C+E + A C++C K + V
Sbjct: 137 VWHKDCFTCSNCKQVIGTGSFFPKGEDFYCVTCHETKFAKHCVKCNKGLVKAPV 190
Score = 130 bits (327), Expect = 3e-30
Identities = 55/161 (34%), Positives = 87/161 (54%), Gaps = 2/161 (1%)
Frame = +2
Query: 458 FHCSRCRSSLVDKPFAAKEDQVLCTDCYSQEYSSRCQECRKAIMPGTRKMEYKGSSWHET 637
F C CR SL K + K+ C C+ + ++ C ECRK I ++++ YK WH+T
Sbjct: 21 FDCHYCRDSLQGKKYVQKDGHHCCLKCFDKFCANTCVECRKPIGADSKEVHYKNRYWHDT 80
Query: 638 CFTCHRCQQPIGTKSFIPKDGQNFCVPCYEKQHALQCIQCKKPITSG--GVTYREQPWHR 811
CF C +C P+ ++F+ KD + C C ++ + +C C KPI +G V Y++ WH+
Sbjct: 81 CFRCAKCLHPLANETFVAKDNKILCNKCTTREDSPKCKGCFKPIVAGDQNVEYKKTVWHK 140
Query: 812 ECFVCTACKKPLSGQRFTSRDEFAYCLGCFCDLYAKKCTGC 934
+CF C+ CK+ + F + E YC+ C +AK C C
Sbjct: 141 DCFTCSNCKQVIGTGSFFPKGEDFYCVTCHETKFAKHCVKC 181
Score = 88.2 bits (217), Expect = 1e-17
Identities = 39/106 (36%), Positives = 57/106 (53%), Gaps = 2/106 (1%)
Frame = +2
Query: 641 FTCHRCQQPIGTKSFIPKDGQNFCVPCYEKQHALQCIQCKKPI--TSGGVTYREQPWHRE 814
F CH C+ + K ++ KDG + C+ C++K A C++C+KPI S V Y+ + WH
Sbjct: 21 FDCHYCRDSLQGKKYVQKDGHHCCLKCFDKFCANTCVECRKPIGADSKEVHYKNRYWHDT 80
Query: 815 CFVCTACKKPLSGQRFTSRDEFAYCLGCFCDLYAKKCTGCANPISA 952
CF C C PL+ + F ++D C C + KC GC PI A
Sbjct: 81 CFRCAKCLHPLANETFVAKDNKILCNKCTTREDSPKCKGCFKPIVA 126
>ref|XP_866260.1| PREDICTED: similar to Four and a half LIM domains protein 1 (FHL-1)
(Skeletal muscle LIM-protein 1) (SLIM 1) (SLIM) (KyoT)
(RBP associated molecule 14-1) (RAM14-1) isoform 4
[Canis familiaris].
Length = 177
Score = 159 bits (402), Expect = 5e-39
Identities = 64/121 (52%), Positives = 85/121 (70%)
Frame = +2
Query: 593 GTRKMEYKGSSWHETCFTCHRCQQPIGTKSFIPKDGQNFCVPCYEKQHALQCIQCKKPIT 772
G + +EYK + WH+ CFTC C+Q IGT SF PK +CV C+E + A C++C K IT
Sbjct: 8 GDQNVEYKKTVWHKDCFTCSNCKQVIGTGSFFPKGEDFYCVTCHETKFAKHCVKCNKAIT 67
Query: 773 SGGVTYREQPWHRECFVCTACKKPLSGQRFTSRDEFAYCLGCFCDLYAKKCTGCANPISA 952
SGG+TY++QPWH ECFVC C K L+GQRFT+ ++ YC+ C+ + AKKC GC NPI+
Sbjct: 68 SGGITYQDQPWHAECFVCVTCSKKLAGQRFTAVEDQYYCVDCYKNFVAKKCAGCKNPITG 127
Query: 953 F 955
F
Sbjct: 128 F 128
Score = 123 bits (309), Expect = 3e-28
Identities = 56/166 (33%), Positives = 80/166 (48%), Gaps = 5/166 (3%)
Frame = +2
Query: 416 KDLSYKDRHWHEACFHCSRCRSSLVDKPFAAKEDQVLCTDCYSQEYSSRCQECRKAIMPG 595
+++ YK WH+ CF CS C+ + F K + C C+ +++ C +C KAI G
Sbjct: 10 QNVEYKKTVWHKDCFTCSNCKQVIGTGSFFPKGEDFYCVTCHETKFAKHCVKCNKAITSG 69
Query: 596 TRKMEYKGSSWHETCFTCHRCQQPIGTKSFIPKDGQNFCVPCYEKQHALQCIQCKKPITS 775
+ Y+ WH CF C C + + + F + Q +CV CY+ A +C CK PIT
Sbjct: 70 G--ITYQDQPWHAECFVCVTCSKKLAGQRFTAVEDQYYCVDCYKNFVAKKCAGCKNPITG 127
Query: 776 GG-----VTYREQPWHRECFVCTACKKPLSGQRFTSRDEFAYCLGC 898
G V Y Q WH CF C C L+ +RF +E YC C
Sbjct: 128 FGKGSSVVAYEGQSWHDYCFHCKKCSMNLANKRFVFHEEQVYCPDC 173
Score = 114 bits (284), Expect = 3e-25
Identities = 55/169 (32%), Positives = 80/169 (47%), Gaps = 3/169 (1%)
Frame = +2
Query: 233 QTRWQKSSTKMTERFDCHHCENSLFGRKYVLREEQPYCVGCFEALFASTCEECGKLIGCD 412
+T W K F C +C+ + + + E YCV C E FA C +C K I
Sbjct: 16 KTVWHKDC------FTCSNCKQVIGTGSFFPKGEDFYCVTCHETKFAKHCVKCNKAITSG 69
Query: 413 CKDLSYKDRHWHEACFHCSRCRSSLVDKPFAAKEDQVLCTDCYSQEYSSRCQECRKAIM- 589
++Y+D+ WH CF C C L + F A EDQ C DCY + +C C+ I
Sbjct: 70 --GITYQDQPWHAECFVCVTCSKKLAGQRFTAVEDQYYCVDCYKNFVAKKCAGCKNPITG 127
Query: 590 --PGTRKMEYKGSSWHETCFTCHRCQQPIGTKSFIPKDGQNFCVPCYEK 730
G+ + Y+G SWH+ CF C +C + K F+ + Q +C C +K
Sbjct: 128 FGKGSSVVAYEGQSWHDYCFHCKKCSMNLANKRFVFHEEQVYCPDCAKK 176
>ref|XP_543425.2| PREDICTED: similar to Paxillin [Canis familiaris].
Length = 664
Score = 130 bits (327), Expect = 3e-30
Identities = 67/216 (31%), Positives = 102/216 (47%), Gaps = 1/216 (0%)
Frame = +2
Query: 269 ERFDCHHCENSLFGRKYVLREEQPYCVGCFEALFASTCEEC-GKLIGCDCKDLSYKDRHW 445
E F C HC+ + R + R+ QPYC + LF+ C C G ++ K ++ DR W
Sbjct: 453 EHFVCTHCQEEIGSRNFFERDGQPYCEKDYHNLFSPRCYYCNGPILD---KVVTALDRTW 509
Query: 446 HEACFHCSRCRSSLVDKPFAAKEDQVLCTDCYSQEYSSRCQECRKAIMPGTRKMEYKGSS 625
H F C++C + + F K+ + C Y ++ +C C +AI+ + +
Sbjct: 510 HPEHFFCAQCGAFFGPEGFHEKDGKAYCRKDYFDMFAPKCGGCARAILENY--ISALNTL 567
Query: 626 WHETCFTCHRCQQPIGTKSFIPKDGQNFCVPCYEKQHALQCIQCKKPITSGGVTYREQPW 805
WH CF C C P SF DGQ +C Y ++ C C+KPIT +T + +
Sbjct: 568 WHPECFVCRECFTPFVNGSFFEHDGQPYCEVHYHERRGSLCSGCQKPITGRCITAMAKKF 627
Query: 806 HRECFVCTACKKPLSGQRFTSRDEFAYCLGCFCDLY 913
H E FVC C K L+ F +++ YC CF L+
Sbjct: 628 HPEHFVCAFCLKQLNKGTFKEQNDKPYCQNCFLKLF 663
Score = 92.4 bits (228), Expect = 8e-19
Identities = 48/169 (28%), Positives = 71/169 (42%)
Frame = +2
Query: 443 WHEACFHCSRCRSSLVDKPFAAKEDQVLCTDCYSQEYSSRCQECRKAIMPGTRKMEYKGS 622
WH F C+ C+ + + F ++ Q C Y +S RC C I+ + +
Sbjct: 450 WHPEHFVCTHCQEEIGSRNFFERDGQPYCEKDYHNLFSPRCYYCNGPILD--KVVTALDR 507
Query: 623 SWHETCFTCHRCQQPIGTKSFIPKDGQNFCVPCYEKQHALQCIQCKKPITSGGVTYREQP 802
+WH F C +C G + F KDG+ +C Y A +C C + I ++
Sbjct: 508 TWHPEHFFCAQCGAFFGPEGFHEKDGKAYCRKDYFDMFAPKCGGCARAILENYISALNTL 567
Query: 803 WHRECFVCTACKKPLSGQRFTSRDEFAYCLGCFCDLYAKKCTGCANPIS 949
WH ECFVC C P F D YC + + C+GC PI+
Sbjct: 568 WHPECFVCRECFTPFVNGSFFEHDGQPYCEVHYHERRGSLCSGCQKPIT 616
Score = 92.0 bits (227), Expect = 1e-18
Identities = 44/128 (34%), Positives = 63/128 (49%)
Frame = +2
Query: 563 CQECRKAIMPGTRKMEYKGSSWHETCFTCHRCQQPIGTKSFIPKDGQNFCVPCYEKQHAL 742
C C+K I + + G +WH F C CQ+ IG+++F +DGQ +C Y +
Sbjct: 431 CGACKKPI--AGQVVTAMGKTWHPEHFVCTHCQEEIGSRNFFERDGQPYCEKDYHNLFSP 488
Query: 743 QCIQCKKPITSGGVTYREQPWHRECFVCTACKKPLSGQRFTSRDEFAYCLGCFCDLYAKK 922
+C C PI VT ++ WH E F C C + F +D AYC + D++A K
Sbjct: 489 RCYYCNGPILDKVVTALDRTWHPEHFFCAQCGAFFGPEGFHEKDGKAYCRKDYFDMFAPK 548
Query: 923 CTGCANPI 946
C GCA I
Sbjct: 549 CGGCARAI 556
>ref|XP_852227.1| PREDICTED: similar to LIM and senescent cell antigen-like domains 2
[Canis familiaris].
Length = 368
Score = 115 bits (288), Expect = 9e-26
Identities = 67/230 (29%), Positives = 104/230 (45%), Gaps = 6/230 (2%)
Frame = +2
Query: 275 FDCHHCENSLFGRKYVLREEQPYCVGCFEALFASTCEECGK-LIGCDCKDLSYKDRHWHE 451
F C C + E + YC F+ LFA C CG+ +IG K ++ +WH
Sbjct: 68 FVCAQCFRPFPEGLFYEFEGRKYCEHDFQMLFAPCCGSCGEFIIGRVIKAMN---NNWHP 124
Query: 452 ACFHCSRCRSSLVDKPFAAKEDQVLCTDCYSQEYSSR-----CQECRKAIMPGTRKMEYK 616
CF C C L D F + LC C+++E + CQ C I + + +K
Sbjct: 125 GCFRCELCDVELADLGFVKNAGRHLCRPCHNREKAKGLGKYVCQRCHLVI--DEQPLMFK 182
Query: 617 GSSWHETCFTCHRCQQPIGTKSFIPKDGQNFCVPCYEKQHALQCIQCKKPITSGGVTYRE 796
++H F+C C + + ++ K G+ +C+PC++K C C++PI V
Sbjct: 183 NDAYHPDHFSCTHCGKELTAEARELK-GELYCLPCHDKMGVPICGACRRPIEGRVVNALG 241
Query: 797 QPWHRECFVCTACKKPLSGQRFTSRDEFAYCLGCFCDLYAKKCTGCANPI 946
+ WH E FVC C+KP G R + AYC + L+ C C++ I
Sbjct: 242 KQWHVEHFVCAKCEKPFLGHRHYEKKGLAYCETHYNQLFGDVCYNCSHVI 291
Score = 84.3 bits (207), Expect = 2e-16
Identities = 48/200 (24%), Positives = 84/200 (42%), Gaps = 5/200 (2%)
Frame = +2
Query: 362 ALFASTCEECGKLIGCDCKDLSYKDRHWHEACFHCSRCRSSLVDKPFAAKEDQVLCTDCY 541
AL + C+ C + ++ +HE CF C++C + F E + C +
Sbjct: 36 ALANAVCQRCQARFAPAERIVNSNGELYHEHCFVCAQCFRPFPEGLFYEFEGRKYCEHDF 95
Query: 542 SQEYSSRCQECRKAIMPGTRKMEYKGSSWHETCFTCHRCQQPIGTKSFIPKDGQNFCVPC 721
++ C C + I+ R ++ ++WH CF C C + F+ G++ C PC
Sbjct: 96 QMLFAPCCGSCGEFII--GRVIKAMNNNWHPGCFRCELCDVELADLGFVKNAGRHLCRPC 153
Query: 722 YEKQHA-----LQCIQCKKPITSGGVTYREQPWHRECFVCTACKKPLSGQRFTSRDEFAY 886
+ ++ A C +C I + ++ +H + F CT C K L+ + + E Y
Sbjct: 154 HNREKAKGLGKYVCQRCHLVIDEQPLMFKNDAYHPDHFSCTHCGKELTAEARELKGEL-Y 212
Query: 887 CLGCFCDLYAKKCTGCANPI 946
CL C + C C PI
Sbjct: 213 CLPCHDKMGVPICGACRRPI 232
Score = 72.4 bits (176), Expect = 8e-13
Identities = 52/215 (24%), Positives = 81/215 (37%), Gaps = 6/215 (2%)
Frame = +2
Query: 275 FDCHHCENSLFGRKYVLREEQPYCVGCF-----EALFASTCEECGKLIGCDCKDLSYKDR 439
F C C+ L +V + C C + L C+ C +I D + L +K+
Sbjct: 127 FRCELCDVELADLGFVKNAGRHLCRPCHNREKAKGLGKYVCQRCHLVI--DEQPLMFKND 184
Query: 440 HWHEACFHCSRCRSSLVDKPFAAKEDQVLCTDCYSQEYSSRCQECRKAIMPGTRKMEYKG 619
+H F C+ C L + K ++ C C+ + C CR+ I R + G
Sbjct: 185 AYHPDHFSCTHCGKELTAEARELK-GELYCLPCHDKMGVPICGACRRPIEG--RVVNALG 241
Query: 620 SSWHETCFTCHRCQQPIGTKSFIPKDGQNFCVPCYEKQHALQCIQCKKPITSGGVTYREQ 799
WH F C +C++P K G +C Y + C C I V+ +
Sbjct: 242 KQWHVEHFVCAKCEKPFLGHRHYEKKGLAYCETHYNQLFGDVCYNCSHVIEGDVVSALNK 301
Query: 800 PWHRECFVCTACKKPLS-GQRFTSRDEFAYCLGCF 901
W CF C+ C L+ +F D C C+
Sbjct: 302 AWCVNCFSCSTCNSKLTLKNKFVEFDMKPVCKRCY 336
Score = 50.8 bits (120), Expect = 3e-06
Identities = 28/94 (29%), Positives = 41/94 (43%), Gaps = 1/94 (1%)
Frame = +2
Query: 269 ERFDCHHCENSLFGRKYVLREEQPYCVGCFEALFASTCEECGKLIGCDCKDLSYKDRHWH 448
E F C CE G ++ ++ YC + LF C C +I D +S ++ W
Sbjct: 247 EHFVCAKCEKPFLGHRHYEKKGLAYCETHYNQLFGDVCYNCSHVIEGDV--VSALNKAWC 304
Query: 449 EACFHCSRCRSSLVDK-PFAAKEDQVLCTDCYSQ 547
CF CS C S L K F + + +C CY +
Sbjct: 305 VNCFSCSTCNSKLTLKNKFVEFDMKPVCKRCYEK 338
Database: RefSeq49_CP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,874,504
Number of sequences in database: 33,336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33336
Number of Hits to DB: 45,330,411
Number of extensions: 1213630
Number of successful extensions: 11169
Number of sequences better than 1.0e-05: 118
Number of HSP's gapped: 7958
Number of HSP's successfully gapped: 259
Length of query: 414
Length of database: 18,874,504
Length adjustment: 105
Effective length of query: 309
Effective length of database: 15,374,224
Effective search space: 4750635216
Effective search space used: 4750635216
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to RefSeqSP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-014700
(1244 letters)
Database: RefSeq49_SP.fasta
24,897 sequences; 11,343,932 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_003124907.2| PREDICTED: four and a half LIM domains prote... 520 e-148
Alignment gi|NP_001230243.1| four and a half LIM domains protein 5 [Sus s... 321 6e-88
Alignment gi|NP_999111.1| four and a half LIM domains protein 3 [Sus scro... 315 4e-86
Alignment gi|XP_003127846.1| PREDICTED: four and a half LIM domains prote... 311 6e-85
Alignment gi|NP_999540.1| four and a half LIM domains 1 protein, isoform ... 278 6e-75
Alignment gi|XP_003133450.2| PREDICTED: LIM and senescent cell antigen-li... 114 1e-25
Alignment gi|XP_003359555.1| PREDICTED: LIM and senescent cell antigen-li... 114 1e-25
Alignment gi|NP_001230787.1| LIM and senescent cell antigen-like domains ... 112 3e-25
Alignment gi|XP_003359314.1| PREDICTED: hypothetical protein LOC100151883... 107 1e-23
Alignment gi|XP_003135128.1| PREDICTED: prickle-like protein 3 [Sus scrof... 102 4e-22
>ref|XP_003124907.2| PREDICTED: four and a half LIM domains protein 2-like isoform 2
[Sus scrofa].
Length = 256
Score = 520 bits (1338), Expect = e-148
Identities = 230/233 (98%), Positives = 230/233 (98%)
Frame = +2
Query: 263 MTERFDCHHCENSLFGRKYVLREEQPYCVGCFEALFASTCEECGKLIGCDCKDLSYKDRH 442
MTERFDCHHCENSLFGRKYVLREEQPYCVGCFEALFASTCEECGKLIGCDCKDLSYKDRH
Sbjct: 1 MTERFDCHHCENSLFGRKYVLREEQPYCVGCFEALFASTCEECGKLIGCDCKDLSYKDRH 60
Query: 443 WHEACFHCSRCRSSLVDKPFAAKEDQVLCTDCYSQEYSSRCQECRKAIMPGTRKMEYKGS 622
WHEACFHCSRCRSSLVDKPFAAKEDQVLCTDCYSQEYSSRCQECRKAIMPGTRKMEYKGS
Sbjct: 61 WHEACFHCSRCRSSLVDKPFAAKEDQVLCTDCYSQEYSSRCQECRKAIMPGTRKMEYKGS 120
Query: 623 SWHETCFTCHRCQQPIGTKSFIPKDGQNFCVPCYEKQHALQCIQCKKPITSGGVTYREQP 802
SWHETCFTCHRCQQPIGTKSFIPKDGQNFCVPCYEKQHALQCIQCKKPITSGGVTYREQP
Sbjct: 121 SWHETCFTCHRCQQPIGTKSFIPKDGQNFCVPCYEKQHALQCIQCKKPITSGGVTYREQP 180
Query: 803 WHRECFVCTACKKPLSGQRFTSRDEFAYCLGCFCDLYAKKCTGCANPISAF*R 961
WHRECFVCTACKKPLSGQRFTSRDEFAYCLGCFCDLYAKKCTGCANPIS R
Sbjct: 181 WHRECFVCTACKKPLSGQRFTSRDEFAYCLGCFCDLYAKKCTGCANPISGLGR 233
Score = 135 bits (340), Expect = 5e-32
Identities = 59/178 (33%), Positives = 93/178 (52%), Gaps = 2/178 (1%)
Frame = +2
Query: 275 FDCHHCENSLFGRKYVLREEQPYCVGCFEALFASTCEECGKLIGCDCKDLSYKDRHWHEA 454
F C C +SL + + +E+Q C C+ ++S C+EC K I + + YK WHE
Sbjct: 66 FHCSRCRSSLVDKPFAAKEDQVLCTDCYSQEYSSRCQECRKAIMPGTRKMEYKGSSWHET 125
Query: 455 CFHCSRCRSSLVDKPFAAKEDQVLCTDCYSQEYSSRCQECRKAIMPGTRKMEYKGSSWHE 634
CF C RC+ + K F K+ Q C CY ++++ +C +C+K I G + Y+ WH
Sbjct: 126 CFTCHRCQQPIGTKSFIPKDGQNFCVPCYEKQHALQCIQCKKPITSGG--VTYREQPWHR 183
Query: 635 TCFTCHRCQQPIGTKSFIPKDGQNFCVPCYEKQHALQCIQCKKPITSGG--VTYREQP 802
CF C C++P+ + F +D +C+ C+ +A +C C PI+ G V RE P
Sbjct: 184 ECFVCTACKKPLSGQRFTSRDEFAYCLGCFCDLYAKKCTGCANPISGLGRPVKEREAP 241
>ref|NP_001230243.1| four and a half LIM domains protein 5 [Sus scrofa].
Length = 284
Score = 321 bits (822), Expect = 6e-88
Identities = 127/228 (55%), Positives = 175/228 (76%)
Frame = +2
Query: 266 TERFDCHHCENSLFGRKYVLREEQPYCVGCFEALFASTCEECGKLIGCDCKDLSYKDRHW 445
T +FDC +C SL G+KYVL+++ PYCV C++ +F++ CEEC + I D KDL YK RHW
Sbjct: 3 TAQFDCQYCTASLLGKKYVLKDDNPYCVSCYDRIFSNYCEECKEPIESDSKDLCYKGRHW 62
Query: 446 HEACFHCSRCRSSLVDKPFAAKEDQVLCTDCYSQEYSSRCQECRKAIMPGTRKMEYKGSS 625
HE CF+C++C SLV+KPFAAK++++LC++CYS E SS+C C++ IMPG+RKME+KG+
Sbjct: 63 HEGCFNCAKCNHSLVEKPFAAKDERLLCSECYSNECSSKCFHCKRTIMPGSRKMEFKGNY 122
Query: 626 WHETCFTCHRCQQPIGTKSFIPKDGQNFCVPCYEKQHALQCIQCKKPITSGGVTYREQPW 805
WHETCF C C+QPIGTK I K+ N+CVPC+EK+ A C CKK ITSGG+T+ +QPW
Sbjct: 123 WHETCFVCEHCRQPIGTKPLISKENGNYCVPCFEKEFAHYCSFCKKVITSGGITFHDQPW 182
Query: 806 HRECFVCTACKKPLSGQRFTSRDEFAYCLGCFCDLYAKKCTGCANPIS 949
H+ECF+C+ C+K L + F S+D++ +CL C+ LYAKKC+ C PI+
Sbjct: 183 HKECFLCSGCRKELCEEEFMSKDDYPFCLDCYNHLYAKKCSACTKPIT 230
Score = 152 bits (383), Expect = 5e-37
Identities = 65/212 (30%), Positives = 110/212 (51%), Gaps = 4/212 (1%)
Frame = +2
Query: 275 FDCHHCENSLFGRKYVLREEQPYCVGCFEALFASTCEECGKLIGCDCKDLSYKDRHWHEA 454
F+C C +SL + + ++E+ C C+ +S C C + I + + +K +WHE
Sbjct: 67 FNCAKCNHSLVEKPFAAKDERLLCSECYSNECSSKCFHCKRTIMPGSRKMEFKGNYWHET 126
Query: 455 CFHCSRCRSSLVDKPFAAKEDQVLCTDCYSQEYSSRCQECRKAIMPGTRKMEYKGSSWHE 634
CF C CR + KP +KE+ C C+ +E++ C C+K I G + + WH+
Sbjct: 127 CFVCEHCRQPIGTKPLISKENGNYCVPCFEKEFAHYCSFCKKVITSGG--ITFHDQPWHK 184
Query: 635 TCFTCHRCQQPIGTKSFIPKDGQNFCVPCYEKQHALQCIQCKKPIT----SGGVTYREQP 802
CF C C++ + + F+ KD FC+ CY +A +C C KPIT + + ++++
Sbjct: 185 ECFLCSGCRKELCEEEFMSKDDYPFCLDCYNHLYAKKCSACTKPITGLRGAKFICFQDRQ 244
Query: 803 WHRECFVCTACKKPLSGQRFTSRDEFAYCLGC 898
WH ECF C C L G+ F ++++ +C C
Sbjct: 245 WHSECFNCGKCSVSLVGEGFLTQNKEIFCRKC 276
Score = 132 bits (333), Expect = 3e-31
Identities = 56/169 (33%), Positives = 90/169 (53%), Gaps = 2/169 (1%)
Frame = +2
Query: 452 ACFHCSRCRSSLVDKPFAAKEDQVLCTDCYSQEYSSRCQECRKAIMPGTRKMEYKGSSWH 631
A F C C +SL+ K + K+D C CY + +S+ C+EC++ I ++ + YKG WH
Sbjct: 4 AQFDCQYCTASLLGKKYVLKDDNPYCVSCYDRIFSNYCEECKEPIESDSKDLCYKGRHWH 63
Query: 632 ETCFTCHRCQQPIGTKSFIPKDGQNFCVPCYEKQHALQCIQCKKPITSGG--VTYREQPW 805
E CF C +C + K F KD + C CY + + +C CK+ I G + ++ W
Sbjct: 64 EGCFNCAKCNHSLVEKPFAAKDERLLCSECYSNECSSKCFHCKRTIMPGSRKMEFKGNYW 123
Query: 806 HRECFVCTACKKPLSGQRFTSRDEFAYCLGCFCDLYAKKCTGCANPISA 952
H CFVC C++P+ + S++ YC+ CF +A C+ C I++
Sbjct: 124 HETCFVCEHCRQPIGTKPLISKENGNYCVPCFEKEFAHYCSFCKKVITS 172
Score = 71.6 bits (174), Expect = 8e-13
Identities = 30/94 (31%), Positives = 49/94 (52%), Gaps = 2/94 (2%)
Frame = +2
Query: 269 ERFDCHHCENSLFGRKYVLREEQPYCVGCFEALFASTCEECGKLIGC--DCKDLSYKDRH 442
E F C C L +++ +++ P+C+ C+ L+A C C K I K + ++DR
Sbjct: 185 ECFLCSGCRKELCEEEFMSKDDYPFCLDCYNHLYAKKCSACTKPITGLRGAKFICFQDRQ 244
Query: 443 WHEACFHCSRCRSSLVDKPFAAKEDQVLCTDCYS 544
WH CF+C +C SLV + F + ++ C C S
Sbjct: 245 WHSECFNCGKCSVSLVGEGFLTQNKEIFCRKCGS 278
>ref|NP_999111.1| four and a half LIM domains protein 3 [Sus scrofa].
Length = 280
Score = 315 bits (806), Expect = 4e-86
Identities = 124/229 (54%), Positives = 170/229 (74%)
Frame = +2
Query: 263 MTERFDCHHCENSLFGRKYVLREEQPYCVGCFEALFASTCEECGKLIGCDCKDLSYKDRH 442
M+E FDC C SL+GRKY+ + PYCV C+++ FA+TC EC +LIG D ++L Y+DRH
Sbjct: 1 MSETFDCAKCSESLYGRKYIQTDNGPYCVPCYDSTFANTCAECQQLIGHDSRELFYEDRH 60
Query: 443 WHEACFHCSRCRSSLVDKPFAAKEDQVLCTDCYSQEYSSRCQECRKAIMPGTRKMEYKGS 622
+HE CF C RC+ SL D+PF ++ ++LC DCY +SS+C CR+ +MPG+RK+EY G
Sbjct: 61 FHEGCFRCCRCQRSLADEPFTCQDSELLCNDCYCSAFSSQCSACRETVMPGSRKLEYGGQ 120
Query: 623 SWHETCFTCHRCQQPIGTKSFIPKDGQNFCVPCYEKQHALQCIQCKKPITSGGVTYREQP 802
+WHE CF C C+QP+G+ SF+P G ++CVPCYE + A +C +C K +T GGVTYR+QP
Sbjct: 121 TWHEHCFLCSGCEQPLGSCSFVPDKGAHYCVPCYENKFAPRCARCSKTLTQGGVTYRDQP 180
Query: 803 WHRECFVCTACKKPLSGQRFTSRDEFAYCLGCFCDLYAKKCTGCANPIS 949
WHREC VCT C+ PL+GQ+FTSRD+ YC+ CF +L+A KC+ C PI+
Sbjct: 181 WHRECLVCTGCQTPLAGQQFTSRDDDPYCVACFGELFAPKCSSCKRPIT 229
>ref|XP_003127846.1| PREDICTED: four and a half LIM domains protein 3-like [Sus scrofa].
Length = 280
Score = 311 bits (796), Expect = 6e-85
Identities = 123/229 (53%), Positives = 168/229 (73%)
Frame = +2
Query: 263 MTERFDCHHCENSLFGRKYVLREEQPYCVGCFEALFASTCEECGKLIGCDCKDLSYKDRH 442
M+E FDC C SL+GRKY+ + PYCV C++ FA+TC EC +LIG D ++L Y+DRH
Sbjct: 1 MSETFDCAKCSESLYGRKYIQTDNGPYCVPCYDNTFANTCAECQQLIGHDSRELFYEDRH 60
Query: 443 WHEACFHCSRCRSSLVDKPFAAKEDQVLCTDCYSQEYSSRCQECRKAIMPGTRKMEYKGS 622
+HE CF C RC+ SL D+PF ++ ++LC DCY +SS+C C + +MPG+RK+EY G
Sbjct: 61 FHEGCFRCCRCQRSLADEPFTCQDSELLCNDCYCSAFSSQCSACGETVMPGSRKLEYGGQ 120
Query: 623 SWHETCFTCHRCQQPIGTKSFIPKDGQNFCVPCYEKQHALQCIQCKKPITSGGVTYREQP 802
+WHE CF C C+QP+G+ SF+P G ++CVPCYE + A +C +C K +T GGVTYR+QP
Sbjct: 121 TWHEHCFLCSGCEQPLGSCSFVPDKGAHYCVPCYENKFAPRCARCSKTLTQGGVTYRDQP 180
Query: 803 WHRECFVCTACKKPLSGQRFTSRDEFAYCLGCFCDLYAKKCTGCANPIS 949
WHREC VCT C+ PL+GQ+FTSRD+ YC+ CF +L+A KC+ C PI+
Sbjct: 181 WHRECLVCTGCQTPLAGQQFTSRDDDPYCVACFGELFAPKCSSCKRPIT 229
>ref|NP_999540.1| four and a half LIM domains 1 protein, isoform C [Sus scrofa].
Length = 296
Score = 278 bits (710), Expect = 6e-75
Identities = 113/231 (48%), Positives = 160/231 (69%)
Frame = +2
Query: 263 MTERFDCHHCENSLFGRKYVLREEQPYCVGCFEALFASTCEECGKLIGCDCKDLSYKDRH 442
M E+FDCH+C + L G+KYV ++ C+ CF+ A+TC EC K IG D K++ YK+R+
Sbjct: 17 MAEKFDCHYCRDPLQGKKYVQKDGHHCCLKCFDKFCANTCVECRKPIGADSKEVHYKNRY 76
Query: 443 WHEACFHCSRCRSSLVDKPFAAKEDQVLCTDCYSQEYSSRCQECRKAIMPGTRKMEYKGS 622
WH+ CF CS+C L ++ F AK++++LC C ++E S +C+ C K I+ G + +EYKG+
Sbjct: 77 WHDTCFRCSKCLHPLANETFMAKDNKILCNKCTTREDSPKCKGCFKPIVAGDQNVEYKGT 136
Query: 623 SWHETCFTCHRCQQPIGTKSFIPKDGQNFCVPCYEKQHALQCIQCKKPITSGGVTYREQP 802
WH+ CFTC C+Q IGT SF PK +CV C+E + A C++C K ITSGG+TY++QP
Sbjct: 137 VWHKDCFTCSNCKQVIGTGSFFPKGEDFYCVTCHETKFAKHCVKCNKAITSGGITYQDQP 196
Query: 803 WHRECFVCTACKKPLSGQRFTSRDEFAYCLGCFCDLYAKKCTGCANPISAF 955
WH ECFVC C K L+GQRFT+ ++ YC+ C+ + AKKC GC NPI+ F
Sbjct: 197 WHAECFVCVTCSKKLAGQRFTAVEDQYYCVDCYKNFVAKKCAGCKNPITGF 247
Score = 136 bits (343), Expect = 2e-32
Identities = 66/213 (30%), Positives = 97/213 (45%), Gaps = 5/213 (2%)
Frame = +2
Query: 275 FDCHHCENSLFGRKYVLREEQPYCVGCFEALFASTCEECGKLIGCDCKDLSYKDRHWHEA 454
F C C + L ++ ++ + C C + C+ C K I +++ YK WH+
Sbjct: 82 FRCSKCLHPLANETFMAKDNKILCNKCTTREDSPKCKGCFKPIVAGDQNVEYKGTVWHKD 141
Query: 455 CFHCSRCRSSLVDKPFAAKEDQVLCTDCYSQEYSSRCQECRKAIMPGTRKMEYKGSSWHE 634
CF CS C+ + F K + C C+ +++ C +C KAI G + Y+ WH
Sbjct: 142 CFTCSNCKQVIGTGSFFPKGEDFYCVTCHETKFAKHCVKCNKAITSGG--ITYQDQPWHA 199
Query: 635 TCFTCHRCQQPIGTKSFIPKDGQNFCVPCYEKQHALQCIQCKKPITSGG-----VTYREQ 799
CF C C + + + F + Q +CV CY+ A +C CK PIT G V Y Q
Sbjct: 200 ECFVCVTCSKKLAGQRFTAVEDQYYCVDCYKNFVAKKCAGCKNPITGFGKGSSVVAYEGQ 259
Query: 800 PWHRECFVCTACKKPLSGQRFTSRDEFAYCLGC 898
WH CF C C L+ +RF E YC C
Sbjct: 260 SWHDYCFHCKKCSVNLANKRFVFHQEQVYCPDC 292
Score = 112 bits (279), Expect = 6e-25
Identities = 52/155 (33%), Positives = 75/155 (48%), Gaps = 3/155 (1%)
Frame = +2
Query: 275 FDCHHCENSLFGRKYVLREEQPYCVGCFEALFASTCEECGKLIGCDCKDLSYKDRHWHEA 454
F C +C+ + + + E YCV C E FA C +C K I ++Y+D+ WH
Sbjct: 143 FTCSNCKQVIGTGSFFPKGEDFYCVTCHETKFAKHCVKCNKAITSG--GITYQDQPWHAE 200
Query: 455 CFHCSRCRSSLVDKPFAAKEDQVLCTDCYSQEYSSRCQECRKAIM---PGTRKMEYKGSS 625
CF C C L + F A EDQ C DCY + +C C+ I G+ + Y+G S
Sbjct: 201 CFVCVTCSKKLAGQRFTAVEDQYYCVDCYKNFVAKKCAGCKNPITGFGKGSSVVAYEGQS 260
Query: 626 WHETCFTCHRCQQPIGTKSFIPKDGQNFCVPCYEK 730
WH+ CF C +C + K F+ Q +C C +K
Sbjct: 261 WHDYCFHCKKCSVNLANKRFVFHQEQVYCPDCAKK 295
>ref|XP_003133450.2| PREDICTED: LIM and senescent cell antigen-like-containing domain
protein 2-like isoform 1 [Sus scrofa].
Length = 318
Score = 114 bits (284), Expect = 1e-25
Identities = 66/230 (28%), Positives = 103/230 (44%), Gaps = 6/230 (2%)
Frame = +2
Query: 275 FDCHHCENSLFGRKYVLREEQPYCVGCFEALFASTCEECGK-LIGCDCKDLSYKDRHWHE 451
F C C + E + YC F+ LFA C CG+ +IG K ++ +WH
Sbjct: 66 FVCAQCFRPFPEGLFYEFEGRKYCEHDFQMLFAPCCGSCGEFIIGRVIKAMN---NNWHP 122
Query: 452 ACFHCSRCRSSLVDKPFAAKEDQVLCTDCYSQEYSSR-----CQECRKAIMPGTRKMEYK 616
CF C C L D F + LC C+++E + CQ C I + + ++
Sbjct: 123 GCFRCELCDVELADLGFVKNAGRHLCRPCHNREKAKGLGKYICQRCHLVI--DEQPLMFR 180
Query: 617 GSSWHETCFTCHRCQQPIGTKSFIPKDGQNFCVPCYEKQHALQCIQCKKPITSGGVTYRE 796
++H F C C + + ++ K G+ +C+PC++K C C++PI V
Sbjct: 181 NDAYHPDHFNCTHCGKELTAEARELK-GELYCLPCHDKMGVPICGACRRPIEGRVVNALG 239
Query: 797 QPWHRECFVCTACKKPLSGQRFTSRDEFAYCLGCFCDLYAKKCTGCANPI 946
+ WH E FVC C+KP G R + AYC + L+ C C++ I
Sbjct: 240 KQWHVEHFVCAKCEKPFLGHRHYEKKGLAYCETHYNQLFGDVCYNCSHVI 289
Score = 85.5 bits (210), Expect = 6e-17
Identities = 49/200 (24%), Positives = 84/200 (42%), Gaps = 5/200 (2%)
Frame = +2
Query: 362 ALFASTCEECGKLIGCDCKDLSYKDRHWHEACFHCSRCRSSLVDKPFAAKEDQVLCTDCY 541
AL + C+ C + ++ +HE CF C++C + F E + C +
Sbjct: 34 ALANAVCQRCQARFAPSERIVNSNGELYHEHCFVCAQCFRPFPEGLFYEFEGRKYCEHDF 93
Query: 542 SQEYSSRCQECRKAIMPGTRKMEYKGSSWHETCFTCHRCQQPIGTKSFIPKDGQNFCVPC 721
++ C C + I+ R ++ ++WH CF C C + F+ G++ C PC
Sbjct: 94 QMLFAPCCGSCGEFII--GRVIKAMNNNWHPGCFRCELCDVELADLGFVKNAGRHLCRPC 151
Query: 722 YEKQHA-----LQCIQCKKPITSGGVTYREQPWHRECFVCTACKKPLSGQRFTSRDEFAY 886
+ ++ A C +C I + +R +H + F CT C K L+ + + E Y
Sbjct: 152 HNREKAKGLGKYICQRCHLVIDEQPLMFRNDAYHPDHFNCTHCGKELTAEARELKGEL-Y 210
Query: 887 CLGCFCDLYAKKCTGCANPI 946
CL C + C C PI
Sbjct: 211 CLPCHDKMGVPICGACRRPI 230
Score = 68.6 bits (166), Expect = 7e-12
Identities = 47/197 (23%), Positives = 76/197 (38%), Gaps = 5/197 (2%)
Frame = +2
Query: 275 FDCHHCENSLFGRKYVLREEQPYCVGCF-----EALFASTCEECGKLIGCDCKDLSYKDR 439
F C C+ L +V + C C + L C+ C +I D + L +++
Sbjct: 125 FRCELCDVELADLGFVKNAGRHLCRPCHNREKAKGLGKYICQRCHLVI--DEQPLMFRND 182
Query: 440 HWHEACFHCSRCRSSLVDKPFAAKEDQVLCTDCYSQEYSSRCQECRKAIMPGTRKMEYKG 619
+H F+C+ C L + K ++ C C+ + C CR+ I R + G
Sbjct: 183 AYHPDHFNCTHCGKELTAEARELK-GELYCLPCHDKMGVPICGACRRPIEG--RVVNALG 239
Query: 620 SSWHETCFTCHRCQQPIGTKSFIPKDGQNFCVPCYEKQHALQCIQCKKPITSGGVTYREQ 799
WH F C +C++P K G +C Y + C C I V+ +
Sbjct: 240 KQWHVEHFVCAKCEKPFLGHRHYEKKGLAYCETHYNQLFGDVCYNCSHVIEGDVVSALNK 299
Query: 800 PWHRECFVCTACKKPLS 850
W CF C+ C L+
Sbjct: 300 AWCVNCFSCSTCNSRLT 316
Score = 53.9 bits (128), Expect = 2e-07
Identities = 31/137 (22%), Positives = 53/137 (38%)
Frame = +2
Query: 269 ERFDCHHCENSLFGRKYVLREEQPYCVGCFEALFASTCEECGKLIGCDCKDLSYKDRHWH 448
+ F+C HC L L+ E YC+ C + + C C + I + + ++ + WH
Sbjct: 187 DHFNCTHCGKELTAEARELKGEL-YCLPCHDKMGVPICGACRRPI--EGRVVNALGKQWH 243
Query: 449 EACFHCSRCRSSLVDKPFAAKEDQVLCTDCYSQEYSSRCQECRKAIMPGTRKMEYKGSSW 628
F C++C + K+ C Y+Q + C C I + +W
Sbjct: 244 VEHFVCAKCEKPFLGHRHYEKKGLAYCETHYNQLFGDVCYNCSHVIEGDV--VSALNKAW 301
Query: 629 HETCFTCHRCQQPIGTK 679
CF+C C + K
Sbjct: 302 CVNCFSCSTCNSRLTLK 318
>ref|XP_003359555.1| PREDICTED: LIM and senescent cell antigen-like-containing domain
protein 2-like isoform 2 [Sus scrofa].
Length = 293
Score = 114 bits (284), Expect = 1e-25
Identities = 66/230 (28%), Positives = 103/230 (44%), Gaps = 6/230 (2%)
Frame = +2
Query: 275 FDCHHCENSLFGRKYVLREEQPYCVGCFEALFASTCEECGK-LIGCDCKDLSYKDRHWHE 451
F C C + E + YC F+ LFA C CG+ +IG K ++ +WH
Sbjct: 41 FVCAQCFRPFPEGLFYEFEGRKYCEHDFQMLFAPCCGSCGEFIIGRVIKAMN---NNWHP 97
Query: 452 ACFHCSRCRSSLVDKPFAAKEDQVLCTDCYSQEYSSR-----CQECRKAIMPGTRKMEYK 616
CF C C L D F + LC C+++E + CQ C I + + ++
Sbjct: 98 GCFRCELCDVELADLGFVKNAGRHLCRPCHNREKAKGLGKYICQRCHLVI--DEQPLMFR 155
Query: 617 GSSWHETCFTCHRCQQPIGTKSFIPKDGQNFCVPCYEKQHALQCIQCKKPITSGGVTYRE 796
++H F C C + + ++ K G+ +C+PC++K C C++PI V
Sbjct: 156 NDAYHPDHFNCTHCGKELTAEARELK-GELYCLPCHDKMGVPICGACRRPIEGRVVNALG 214
Query: 797 QPWHRECFVCTACKKPLSGQRFTSRDEFAYCLGCFCDLYAKKCTGCANPI 946
+ WH E FVC C+KP G R + AYC + L+ C C++ I
Sbjct: 215 KQWHVEHFVCAKCEKPFLGHRHYEKKGLAYCETHYNQLFGDVCYNCSHVI 264
Score = 85.5 bits (210), Expect = 6e-17
Identities = 49/200 (24%), Positives = 84/200 (42%), Gaps = 5/200 (2%)
Frame = +2
Query: 362 ALFASTCEECGKLIGCDCKDLSYKDRHWHEACFHCSRCRSSLVDKPFAAKEDQVLCTDCY 541
AL + C+ C + ++ +HE CF C++C + F E + C +
Sbjct: 9 ALANAVCQRCQARFAPSERIVNSNGELYHEHCFVCAQCFRPFPEGLFYEFEGRKYCEHDF 68
Query: 542 SQEYSSRCQECRKAIMPGTRKMEYKGSSWHETCFTCHRCQQPIGTKSFIPKDGQNFCVPC 721
++ C C + I+ R ++ ++WH CF C C + F+ G++ C PC
Sbjct: 69 QMLFAPCCGSCGEFII--GRVIKAMNNNWHPGCFRCELCDVELADLGFVKNAGRHLCRPC 126
Query: 722 YEKQHA-----LQCIQCKKPITSGGVTYREQPWHRECFVCTACKKPLSGQRFTSRDEFAY 886
+ ++ A C +C I + +R +H + F CT C K L+ + + E Y
Sbjct: 127 HNREKAKGLGKYICQRCHLVIDEQPLMFRNDAYHPDHFNCTHCGKELTAEARELKGEL-Y 185
Query: 887 CLGCFCDLYAKKCTGCANPI 946
CL C + C C PI
Sbjct: 186 CLPCHDKMGVPICGACRRPI 205
Score = 68.6 bits (166), Expect = 7e-12
Identities = 47/197 (23%), Positives = 76/197 (38%), Gaps = 5/197 (2%)
Frame = +2
Query: 275 FDCHHCENSLFGRKYVLREEQPYCVGCF-----EALFASTCEECGKLIGCDCKDLSYKDR 439
F C C+ L +V + C C + L C+ C +I D + L +++
Sbjct: 100 FRCELCDVELADLGFVKNAGRHLCRPCHNREKAKGLGKYICQRCHLVI--DEQPLMFRND 157
Query: 440 HWHEACFHCSRCRSSLVDKPFAAKEDQVLCTDCYSQEYSSRCQECRKAIMPGTRKMEYKG 619
+H F+C+ C L + K ++ C C+ + C CR+ I R + G
Sbjct: 158 AYHPDHFNCTHCGKELTAEARELK-GELYCLPCHDKMGVPICGACRRPIEG--RVVNALG 214
Query: 620 SSWHETCFTCHRCQQPIGTKSFIPKDGQNFCVPCYEKQHALQCIQCKKPITSGGVTYREQ 799
WH F C +C++P K G +C Y + C C I V+ +
Sbjct: 215 KQWHVEHFVCAKCEKPFLGHRHYEKKGLAYCETHYNQLFGDVCYNCSHVIEGDVVSALNK 274
Query: 800 PWHRECFVCTACKKPLS 850
W CF C+ C L+
Sbjct: 275 AWCVNCFSCSTCNSRLT 291
Score = 53.9 bits (128), Expect = 2e-07
Identities = 31/137 (22%), Positives = 53/137 (38%)
Frame = +2
Query: 269 ERFDCHHCENSLFGRKYVLREEQPYCVGCFEALFASTCEECGKLIGCDCKDLSYKDRHWH 448
+ F+C HC L L+ E YC+ C + + C C + I + + ++ + WH
Sbjct: 162 DHFNCTHCGKELTAEARELKGEL-YCLPCHDKMGVPICGACRRPI--EGRVVNALGKQWH 218
Query: 449 EACFHCSRCRSSLVDKPFAAKEDQVLCTDCYSQEYSSRCQECRKAIMPGTRKMEYKGSSW 628
F C++C + K+ C Y+Q + C C I + +W
Sbjct: 219 VEHFVCAKCEKPFLGHRHYEKKGLAYCETHYNQLFGDVCYNCSHVIEGDV--VSALNKAW 276
Query: 629 HETCFTCHRCQQPIGTK 679
CF+C C + K
Sbjct: 277 CVNCFSCSTCNSRLTLK 293
>ref|NP_001230787.1| LIM and senescent cell antigen-like domains 1 [Sus scrofa].
Length = 325
Score = 112 bits (281), Expect = 3e-25
Identities = 67/226 (29%), Positives = 98/226 (43%), Gaps = 6/226 (2%)
Frame = +2
Query: 275 FDCHHCENSLFGRKYVLREEQPYCVGCFEALFASTCEECGK-LIGCDCKDLSYKDRHWHE 451
F C C + E + YC F+ LFA C +CG+ +IG K ++ WH
Sbjct: 36 FVCAQCFQQFPEGLFYEFEGRKYCEHDFQMLFAPCCHQCGEFIIGRVIKAMN---NSWHP 92
Query: 452 ACFHCSRCRSSLVDKPFAAKEDQVLCTDCYSQEYSSR-----CQECRKAIMPGTRKMEYK 616
CF C C+ L D F + LC C ++E + CQ+C I + + +K
Sbjct: 93 ECFRCDLCQEVLADIGFVKNAGRHLCRPCRNREKARGLGKYICQKCHAII--DEQPLIFK 150
Query: 617 GSSWHETCFTCHRCQQPIGTKSFIPKDGQNFCVPCYEKQHALQCIQCKKPITSGGVTYRE 796
+H F C C + + T G+ +C+PC++K C C++PI V
Sbjct: 151 NDPYHPDHFNCANCGKEL-TADARELKGELYCLPCHDKMGVPICGACRRPIEGRVVNAMG 209
Query: 797 QPWHRECFVCTACKKPLSGQRFTSRDEFAYCLGCFCDLYAKKCTGC 934
+ WH E FVC C+KP G R R AYC + L+ C C
Sbjct: 210 KQWHVEHFVCAKCEKPFLGHRHYERKGLAYCETHYNQLFGDVCFHC 255
Score = 90.5 bits (223), Expect = 2e-18
Identities = 52/200 (26%), Positives = 86/200 (43%), Gaps = 5/200 (2%)
Frame = +2
Query: 362 ALFASTCEECGKLIGCDCKDLSYKDRHWHEACFHCSRCRSSLVDKPFAAKEDQVLCTDCY 541
AL ++CE C K ++ +HE CF C++C + F E + C +
Sbjct: 4 ALANASCERCRGGFAPAEKIVNSNGELYHEQCFVCAQCFQQFPEGLFYEFEGRKYCEHDF 63
Query: 542 SQEYSSRCQECRKAIMPGTRKMEYKGSSWHETCFTCHRCQQPIGTKSFIPKDGQNFCVPC 721
++ C +C + I+ R ++ +SWH CF C CQ+ + F+ G++ C PC
Sbjct: 64 QMLFAPCCHQCGEFII--GRVIKAMNNSWHPECFRCDLCQEVLADIGFVKNAGRHLCRPC 121
Query: 722 YEKQHA-----LQCIQCKKPITSGGVTYREQPWHRECFVCTACKKPLSGQRFTSRDEFAY 886
++ A C +C I + ++ P+H + F C C K L+ + E Y
Sbjct: 122 RNREKARGLGKYICQKCHAIIDEQPLIFKNDPYHPDHFNCANCGKELTADARELKGEL-Y 180
Query: 887 CLGCFCDLYAKKCTGCANPI 946
CL C + C C PI
Sbjct: 181 CLPCHDKMGVPICGACRRPI 200
Score = 73.6 bits (179), Expect = 2e-13
Identities = 52/217 (23%), Positives = 83/217 (38%), Gaps = 6/217 (2%)
Frame = +2
Query: 269 ERFDCHHCENSLFGRKYVLREEQPYCVGC-----FEALFASTCEECGKLIGCDCKDLSYK 433
E F C C+ L +V + C C L C++C +I D + L +K
Sbjct: 93 ECFRCDLCQEVLADIGFVKNAGRHLCRPCRNREKARGLGKYICQKCHAII--DEQPLIFK 150
Query: 434 DRHWHEACFHCSRCRSSLVDKPFAAKEDQVLCTDCYSQEYSSRCQECRKAIMPGTRKMEY 613
+ +H F+C+ C L K ++ C C+ + C CR+ I R +
Sbjct: 151 NDPYHPDHFNCANCGKELTADARELK-GELYCLPCHDKMGVPICGACRRPIEG--RVVNA 207
Query: 614 KGSSWHETCFTCHRCQQPIGTKSFIPKDGQNFCVPCYEKQHALQCIQCKKPITSGGVTYR 793
G WH F C +C++P + G +C Y + C C + I V+
Sbjct: 208 MGKQWHVEHFVCAKCEKPFLGHRHYERKGLAYCETHYNQLFGDVCFHCNRVIEGDVVSAL 267
Query: 794 EQPWHRECFVCTACKKPLS-GQRFTSRDEFAYCLGCF 901
+ W CF C+ C L+ +F D C C+
Sbjct: 268 NKAWCVSCFACSTCNTKLTLKNKFVEFDMKPVCKKCY 304
>ref|XP_003359314.1| PREDICTED: hypothetical protein LOC100151883 [Sus scrofa].
Length = 715
Score = 107 bits (267), Expect = 1e-23
Identities = 50/153 (32%), Positives = 74/153 (48%), Gaps = 2/153 (1%)
Frame = +2
Query: 437 RHWHEACFHCSRCRSSLVDKPFAAKEDQVLCTDCYSQEYSSRCQECRKAIMPGTRKMEYK 616
R WH F+C+ C++SL D F +++ V C CY Q ++ C +C IM M
Sbjct: 556 RSWHPEEFNCAYCKTSLADVCFVEEQNNVYCERCYEQFFAPVCAKCNTKIMGEV--MHAL 613
Query: 617 GSSWHETCFTCHRCQQPIGTKSFIPKDGQNFCVPCYEKQHALQCIQCKKPITSGG--VTY 790
+WH TCF C C++P G F +DG+ +C Y + +C C P+ +G +
Sbjct: 614 RQTWHTTCFVCAACKKPFGNSLFHMEDGEPYCEKDYVNLFSTKCHGCDFPVEAGDKFIEA 673
Query: 791 REQPWHRECFVCTACKKPLSGQRFTSRDEFAYC 889
WH CF+C C L GQ F S+ + C
Sbjct: 674 LGHTWHDTCFICAVCHVNLEGQPFYSKKDKPLC 706
Score = 89.0 bits (219), Expect = 5e-18
Identities = 45/158 (28%), Positives = 75/158 (47%), Gaps = 1/158 (0%)
Frame = +2
Query: 269 ERFDCHHCENSLFGRKYVLREEQPYCVGCFEALFASTCEECG-KLIGCDCKDLSYKDRHW 445
E F+C +C+ SL +V + YC C+E FA C +C K++G + + + W
Sbjct: 561 EEFNCAYCKTSLADVCFVEEQNNVYCERCYEQFFAPVCAKCNTKIMG---EVMHALRQTW 617
Query: 446 HEACFHCSRCRSSLVDKPFAAKEDQVLCTDCYSQEYSSRCQECRKAIMPGTRKMEYKGSS 625
H CF C+ C+ + F ++ + C Y +S++C C + G + +E G +
Sbjct: 618 HTTCFVCAACKKPFGNSLFHMEDGEPYCEKDYVNLFSTKCHGCDFPVEAGDKFIEALGHT 677
Query: 626 WHETCFTCHRCQQPIGTKSFIPKDGQNFCVPCYEKQHA 739
WH+TCF C C + + F K + C K+HA
Sbjct: 678 WHDTCFICAVCHVNLEGQPFYSKKDKPLC-----KKHA 710
Score = 86.7 bits (213), Expect = 3e-17
Identities = 39/112 (34%), Positives = 52/112 (46%)
Frame = +2
Query: 617 GSSWHETCFTCHRCQQPIGTKSFIPKDGQNFCVPCYEKQHALQCIQCKKPITSGGVTYRE 796
G SWH F C C+ + F+ + +C CYE+ A C +C I +
Sbjct: 555 GRSWHPEEFNCAYCKTSLADVCFVEEQNNVYCERCYEQFFAPVCAKCNTKIMGEVMHALR 614
Query: 797 QPWHRECFVCTACKKPLSGQRFTSRDEFAYCLGCFCDLYAKKCTGCANPISA 952
Q WH CFVC ACKKP F D YC + +L++ KC GC P+ A
Sbjct: 615 QTWHTTCFVCAACKKPFGNSLFHMEDGEPYCEKDYVNLFSTKCHGCDFPVEA 666
Score = 55.1 bits (131), Expect = 8e-08
Identities = 25/88 (28%), Positives = 42/88 (47%)
Frame = +2
Query: 266 TERFDCHHCENSLFGRKYVLREEQPYCVGCFEALFASTCEECGKLIGCDCKDLSYKDRHW 445
T F C C+ + + + +PYC + LF++ C C + K + W
Sbjct: 619 TTCFVCAACKKPFGNSLFHMEDGEPYCEKDYVNLFSTKCHGCDFPVEAGDKFIEALGHTW 678
Query: 446 HEACFHCSRCRSSLVDKPFAAKEDQVLC 529
H+ CF C+ C +L +PF +K+D+ LC
Sbjct: 679 HDTCFICAVCHVNLEGQPFYSKKDKPLC 706
>ref|XP_003135128.1| PREDICTED: prickle-like protein 3 [Sus scrofa].
Length = 622
Score = 102 bits (254), Expect = 4e-22
Identities = 59/180 (32%), Positives = 83/180 (46%), Gaps = 10/180 (5%)
Frame = +2
Query: 380 CEECGKLIGCDCKDLS-YKDRH-----WHEACFHCSRCRSSLVDKPFAAKEDQVLCTDCY 541
CEECGK IG D++ + R WH CF CS CR LVD + +V C +
Sbjct: 186 CEECGKQIGGG--DIAVFASRAGLGACWHPQCFVCSTCRELLVDLIYFYHAGKVYCGRHH 243
Query: 542 SQEYSSRCQECRKAIMPGTRKMEYKGSSWHETCFTCHRCQQPIGTKSFIPKDGQNFCVPC 721
++ RCQ C + I E +G WH F C C+ +G + ++ + + C C
Sbjct: 244 AERLRPRCQACDEIIF-SPECTEAEGRHWHMGHFCCFECEASLGGQRYVMRQSRPHCCAC 302
Query: 722 YEKQHALQCIQCKKPI--TSGGVTYREQPWHR--ECFVCTACKKPLSGQRFTSRDEFAYC 889
YE +HA C C + I G + Y Q WH CF C+ C + L G+ F R +C
Sbjct: 303 YEARHAEYCDGCGEHIGLDQGQMAYEGQHWHASDRCFCCSRCGRALLGRPFLPRRGLIFC 362
Score = 89.0 bits (219), Expect = 5e-18
Identities = 36/88 (40%), Positives = 56/88 (63%), Gaps = 2/88 (2%)
Frame = +2
Query: 275 FDCHHCENSLFGRKYVLREEQPYCVGCFEALFASTCEECGKLIGCDCKDLSYKDRHWH-- 448
F C CE SL G++YV+R+ +P+C C+EA A C+ CG+ IG D ++Y+ +HWH
Sbjct: 276 FCCFECEASLGGQRYVMRQSRPHCCACYEARHAEYCDGCGEHIGLDQGQMAYEGQHWHAS 335
Query: 449 EACFHCSRCRSSLVDKPFAAKEDQVLCT 532
+ CF CSRC +L+ +PF + + C+
Sbjct: 336 DRCFCCSRCGRALLGRPFLPRRGLIFCS 363
Score = 77.8 bits (190), Expect = 1e-14
Identities = 41/149 (27%), Positives = 65/149 (43%), Gaps = 3/149 (2%)
Frame = +2
Query: 275 FDCHHCENSLFGRKYVLREEQPYCVGCFEALFASTCEECGKLI-GCDCKDLSYKDRHWHE 451
F C C L Y + YC C+ C ++I +C + + RHWH
Sbjct: 216 FVCSTCRELLVDLIYFYHAGKVYCGRHHAERLRPRCQACDEIIFSPECTEA--EGRHWHM 273
Query: 452 ACFHCSRCRSSLVDKPFAAKEDQVLCTDCYSQEYSSRCQECRKAIMPGTRKMEYKGSSWH 631
F C C +SL + + ++ + C CY ++ C C + I +M Y+G WH
Sbjct: 274 GHFCCFECEASLGGQRYVMRQSRPHCCACYEARHAEYCDGCGEHIGLDQGQMAYEGQHWH 333
Query: 632 --ETCFTCHRCQQPIGTKSFIPKDGQNFC 712
+ CF C RC + + + F+P+ G FC
Sbjct: 334 ASDRCFCCSRCGRALLGRPFLPRRGLIFC 362
Score = 67.4 bits (163), Expect = 2e-11
Identities = 38/133 (28%), Positives = 59/133 (44%), Gaps = 5/133 (3%)
Frame = +2
Query: 563 CQECRKAIMPGTRKMEYK----GSSWHETCFTCHRCQQPIGTKSFIPKDGQNFCVPCYEK 730
C+EC K I G + G+ WH CF C C++ + + G+ +C + +
Sbjct: 186 CEECGKQIGGGDIAVFASRAGLGACWHPQCFVCSTCRELLVDLIYFYHAGKVYCGRHHAE 245
Query: 731 QHALQCIQCKKPITSGGVTYRE-QPWHRECFVCTACKKPLSGQRFTSRDEFAYCLGCFCD 907
+ +C C + I S T E + WH F C C+ L GQR+ R +C C+
Sbjct: 246 RLRPRCQACDEIIFSPECTEAEGRHWHMGHFCCFECEASLGGQRYVMRQSRPHCCACYEA 305
Query: 908 LYAKKCTGCANPI 946
+A+ C GC I
Sbjct: 306 RHAEYCDGCGEHI 318
Database: RefSeq49_SP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 11,343,932
Number of sequences in database: 24,897
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 24897
Number of Hits to DB: 28,686,875
Number of extensions: 852234
Number of successful extensions: 6594
Number of sequences better than 1.0e-05: 69
Number of HSP's gapped: 5018
Number of HSP's successfully gapped: 136
Length of query: 414
Length of database: 11,343,932
Length adjustment: 101
Effective length of query: 313
Effective length of database: 8,829,335
Effective search space: 2763581855
Effective search space used: 2763581855
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)
Search to RefSeqMP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-014700
(1244 letters)
Database: RefSeq49_MP.fasta
30,036 sequences; 15,617,559 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_034342.1| four and a half LIM domains protein 2 [Mus musc... 458 e-129
Alignment gi|NP_067293.1| four and a half LIM domains protein 5 [Mus musc... 317 2e-86
Alignment gi|NP_034343.2| four and a half LIM domains protein 3 [Mus musc... 312 3e-85
Alignment gi|NP_001070830.1| four and a half LIM domains protein 1 isofor... 275 7e-74
Alignment gi|NP_034341.2| four and a half LIM domains protein 1 isoform 3... 275 7e-74
Alignment gi|NP_001070829.1| four and a half LIM domains protein 1 isofor... 272 3e-73
Alignment gi|NP_034344.2| four and a half LIM domains 4 [Mus musculus]. 269 4e-72
Alignment gi|NP_598676.2| paxillin isoform beta [Mus musculus]. 131 1e-30
Alignment gi|NP_035353.1| paxillin isoform alpha [Mus musculus]. 131 1e-30
Alignment gi|NP_001180232.1| LIM and senescent cell antigen-like-containi... 114 2e-25
>ref|NP_034342.1| four and a half LIM domains protein 2 [Mus musculus].
Length = 279
Score = 458 bits (1179), Expect = e-129
Identities = 194/229 (84%), Positives = 211/229 (92%)
Frame = +2
Query: 263 MTERFDCHHCENSLFGRKYVLREEQPYCVGCFEALFASTCEECGKLIGCDCKDLSYKDRH 442
MTERFDCHHC SL+G+KY+L+EE P+CV CFE L+A+TCEECG IGCDCKDLSYKDRH
Sbjct: 1 MTERFDCHHCNESLYGKKYILKEENPHCVACFEELYANTCEECGTPIGCDCKDLSYKDRH 60
Query: 443 WHEACFHCSRCRSSLVDKPFAAKEDQVLCTDCYSQEYSSRCQECRKAIMPGTRKMEYKGS 622
WHE CFHCSRC SSLVDKPFAAKE+Q+LCTDCYS EYSS+CQEC+K IMPGTRKMEYKGS
Sbjct: 61 WHEGCFHCSRCGSSLVDKPFAAKEEQLLCTDCYSNEYSSKCQECKKTIMPGTRKMEYKGS 120
Query: 623 SWHETCFTCHRCQQPIGTKSFIPKDGQNFCVPCYEKQHALQCIQCKKPITSGGVTYREQP 802
SWHETCFTC RCQQPIGTKSFIPK+ QNFCVPCYEKQ+ALQC+QCKKPIT+GGVTYREQP
Sbjct: 121 SWHETCFTCQRCQQPIGTKSFIPKENQNFCVPCYEKQYALQCVQCKKPITTGGVTYREQP 180
Query: 803 WHRECFVCTACKKPLSGQRFTSRDEFAYCLGCFCDLYAKKCTGCANPIS 949
WH+ECFVCTACKK LSGQRFT+RDEF YCL CFCDLYAKKC GC NPIS
Sbjct: 181 WHKECFVCTACKKQLSGQRFTARDEFPYCLTCFCDLYAKKCAGCTNPIS 229
Score = 82.0 bits (201), Expect = 9e-16
Identities = 36/92 (39%), Positives = 52/92 (56%), Gaps = 2/92 (2%)
Frame = +2
Query: 269 ERFDCHHCENSLFGRKYVLREEQPYCVGCFEALFASTCEECGKLIGC--DCKDLSYKDRH 442
E F C C+ L G+++ R+E PYC+ CF L+A C C I K +S+++R
Sbjct: 184 ECFVCTACKKQLSGQRFTARDEFPYCLTCFCDLYAKKCAGCTNPISGLGGTKYISFEERQ 243
Query: 443 WHEACFHCSRCRSSLVDKPFAAKEDQVLCTDC 538
WH CF+C +C SLV + F + D +LC DC
Sbjct: 244 WHNDCFNCKKCSLSLVGRGFLTERDDILCPDC 275
>ref|NP_067293.1| four and a half LIM domains protein 5 [Mus musculus].
Length = 284
Score = 317 bits (811), Expect = 2e-86
Identities = 126/228 (55%), Positives = 173/228 (75%)
Frame = +2
Query: 266 TERFDCHHCENSLFGRKYVLREEQPYCVGCFEALFASTCEECGKLIGCDCKDLSYKDRHW 445
+ +FDC +C +SL G+KYVL+++ YC+ C++ +F++ CE+C + I D KDL YK+RHW
Sbjct: 3 SSQFDCQYCTSSLIGKKYVLKDDNLYCISCYDRIFSNYCEQCKEPIESDSKDLCYKNRHW 62
Query: 446 HEACFHCSRCRSSLVDKPFAAKEDQVLCTDCYSQEYSSRCQECRKAIMPGTRKMEYKGSS 625
HE CF C++C SLV+KPF AK+D++LCTDCYS E SS+C C++ IMPG+RKME+KG+
Sbjct: 63 HEGCFRCNKCHHSLVEKPFVAKDDRLLCTDCYSNECSSKCFHCKRTIMPGSRKMEFKGNY 122
Query: 626 WHETCFTCHRCQQPIGTKSFIPKDGQNFCVPCYEKQHALQCIQCKKPITSGGVTYREQPW 805
WHETCF C C+QPIGTK I K+ N+CVPC+EK+ A C CKK ITSGG+T+R+Q W
Sbjct: 123 WHETCFVCEHCRQPIGTKPLISKESGNYCVPCFEKEFAHYCNFCKKVITSGGITFRDQIW 182
Query: 806 HRECFVCTACKKPLSGQRFTSRDEFAYCLGCFCDLYAKKCTGCANPIS 949
H+ECF+C+ C+K L + F S+D+F +CL C+ LYAKKC C PI+
Sbjct: 183 HKECFLCSGCRKELYEEAFMSKDDFPFCLDCYNHLYAKKCAACTKPIT 230
Score = 134 bits (338), Expect = 1e-31
Identities = 54/167 (32%), Positives = 90/167 (53%), Gaps = 2/167 (1%)
Frame = +2
Query: 458 FHCSRCRSSLVDKPFAAKEDQVLCTDCYSQEYSSRCQECRKAIMPGTRKMEYKGSSWHET 637
F C C SSL+ K + K+D + C CY + +S+ C++C++ I ++ + YK WHE
Sbjct: 6 FDCQYCTSSLIGKKYVLKDDNLYCISCYDRIFSNYCEQCKEPIESDSKDLCYKNRHWHEG 65
Query: 638 CFTCHRCQQPIGTKSFIPKDGQNFCVPCYEKQHALQCIQCKKPITSGG--VTYREQPWHR 811
CF C++C + K F+ KD + C CY + + +C CK+ I G + ++ WH
Sbjct: 66 CFRCNKCHHSLVEKPFVAKDDRLLCTDCYSNECSSKCFHCKRTIMPGSRKMEFKGNYWHE 125
Query: 812 ECFVCTACKKPLSGQRFTSRDEFAYCLGCFCDLYAKKCTGCANPISA 952
CFVC C++P+ + S++ YC+ CF +A C C I++
Sbjct: 126 TCFVCEHCRQPIGTKPLISKESGNYCVPCFEKEFAHYCNFCKKVITS 172
Score = 71.6 bits (174), Expect = 1e-12
Identities = 31/94 (32%), Positives = 49/94 (52%), Gaps = 2/94 (2%)
Frame = +2
Query: 269 ERFDCHHCENSLFGRKYVLREEQPYCVGCFEALFASTCEECGKLIGC--DCKDLSYKDRH 442
E F C C L+ ++ +++ P+C+ C+ L+A C C K I K + ++DR
Sbjct: 185 ECFLCSGCRKELYEEAFMSKDDFPFCLDCYNHLYAKKCAACTKPITGLRGAKFICFQDRQ 244
Query: 443 WHEACFHCSRCRSSLVDKPFAAKEDQVLCTDCYS 544
WH CF+C +C SLV + F ++LC C S
Sbjct: 245 WHSECFNCGKCSVSLVGEGFLTHNMEILCRKCGS 278
>ref|NP_034343.2| four and a half LIM domains protein 3 [Mus musculus].
Length = 289
Score = 312 bits (800), Expect = 3e-85
Identities = 123/229 (53%), Positives = 169/229 (73%)
Frame = +2
Query: 263 MTERFDCHHCENSLFGRKYVLREEQPYCVGCFEALFASTCEECGKLIGCDCKDLSYKDRH 442
M+E FDC C SL+GRKY+ + PYCV C++ FA+TC EC +LIG D ++L Y+DRH
Sbjct: 1 MSEAFDCAKCNESLYGRKYIQTDSGPYCVPCYDNTFANTCAECQQLIGHDSRELFYEDRH 60
Query: 443 WHEACFHCSRCRSSLVDKPFAAKEDQVLCTDCYSQEYSSRCQECRKAIMPGTRKMEYKGS 622
+HE CF C RC+ SL D+PF ++ ++LC +CY +SS+C C + +MPG+RK+EY G
Sbjct: 61 FHEGCFRCCRCQRSLADEPFTCQDSELLCNECYCTAFSSQCSACGETVMPGSRKLEYGGQ 120
Query: 623 SWHETCFTCHRCQQPIGTKSFIPKDGQNFCVPCYEKQHALQCIQCKKPITSGGVTYREQP 802
+WHE CF C C+QP+G++SF+P G ++CVPCYE + A +C +C K +T GGVTYR+QP
Sbjct: 121 TWHEHCFLCSGCEQPLGSRSFVPDKGAHYCVPCYENKFAPRCARCSKTLTQGGVTYRDQP 180
Query: 803 WHRECFVCTACKKPLSGQRFTSRDEFAYCLGCFCDLYAKKCTGCANPIS 949
WHREC VCT CK PL+GQ+FTSRD+ YC+ CF +L+A KC+ C PI+
Sbjct: 181 WHRECLVCTGCKTPLAGQQFTSRDDDPYCVACFGELFAPKCSSCKRPIT 229
Score = 148 bits (374), Expect = 8e-36
Identities = 66/221 (29%), Positives = 99/221 (44%), Gaps = 13/221 (5%)
Frame = +2
Query: 275 FDCHHCENSLFGRKYVLREEQPYCVGCFEALFASTCEECGKLIGCDCKDLSYKDRHWHEA 454
F C C+ SL + ++ + C C+ F+S C CG+ + + L Y + WHE
Sbjct: 66 FRCCRCQRSLADEPFTCQDSELLCNECYCTAFSSQCSACGETVMPGSRKLEYGGQTWHEH 125
Query: 455 CFHCSRCRSSLVDKPFAAKEDQVLCTDCYSQEYSSRCQECRKAIMPGTRKMEYKGSSWHE 634
CF CS C L + F + C CY +++ RC C K + G + Y+ WH
Sbjct: 126 CFLCSGCEQPLGSRSFVPDKGAHYCVPCYENKFAPRCARCSKTLTQGG--VTYRDQPWHR 183
Query: 635 TCFTCHRCQQPIGTKSFIPKDGQNFCVPCYEKQHALQCIQCKKPITSGG----------- 781
C C C+ P+ + F +D +CV C+ + A +C CK+PIT G
Sbjct: 184 ECLVCTGCKTPLAGQQFTSRDDDPYCVACFGELFAPKCSSCKRPITGGSGGGEGAGLGGG 243
Query: 782 --VTYREQPWHRECFVCTACKKPLSGQRFTSRDEFAYCLGC 898
V++ ++ WH CF C C L GQ F + C GC
Sbjct: 244 KYVSFEDRHWHHSCFSCARCSTSLVGQGFVPDGDQVLCQGC 284
>ref|NP_001070830.1| four and a half LIM domains protein 1 isoform 2 [Mus musculus].
Length = 296
Score = 275 bits (702), Expect = 7e-74
Identities = 111/231 (48%), Positives = 160/231 (69%)
Frame = +2
Query: 263 MTERFDCHHCENSLFGRKYVLREEQPYCVGCFEALFASTCEECGKLIGCDCKDLSYKDRH 442
M+E+FDCH+C + L G+KYV ++ + C+ CF+ A+TC +C K I D K++ YK+R+
Sbjct: 17 MSEKFDCHYCRDPLQGKKYVQKDGRHCCLKCFDKFCANTCVDCRKPISADAKEVHYKNRY 76
Query: 443 WHEACFHCSRCRSSLVDKPFAAKEDQVLCTDCYSQEYSSRCQECRKAIMPGTRKMEYKGS 622
WH+ CF C++C L + F +K+ ++LC C ++E S RC+ C KAI+ G + +EYKG+
Sbjct: 77 WHDNCFRCAKCLHPLASETFVSKDGKILCNKCATREDSPRCKGCFKAIVAGDQNVEYKGT 136
Query: 623 SWHETCFTCHRCQQPIGTKSFIPKDGQNFCVPCYEKQHALQCIQCKKPITSGGVTYREQP 802
WH+ CFTC C+Q IGT SF PK +CV C+E + A C++C K ITSGG+TY++QP
Sbjct: 137 VWHKDCFTCSNCKQVIGTGSFFPKGEDFYCVTCHETKFAKHCVKCNKAITSGGITYQDQP 196
Query: 803 WHRECFVCTACKKPLSGQRFTSRDEFAYCLGCFCDLYAKKCTGCANPISAF 955
WH ECFVC C K L+GQRFT+ ++ YC+ C+ + AKKC GC NPI+ F
Sbjct: 197 WHAECFVCVTCSKKLAGQRFTAVEDQYYCVDCYKNFVAKKCAGCKNPITGF 247
Score = 137 bits (345), Expect = 2e-32
Identities = 67/213 (31%), Positives = 98/213 (46%), Gaps = 5/213 (2%)
Frame = +2
Query: 275 FDCHHCENSLFGRKYVLREEQPYCVGCFEALFASTCEECGKLIGCDCKDLSYKDRHWHEA 454
F C C + L +V ++ + C C + C+ C K I +++ YK WH+
Sbjct: 82 FRCAKCLHPLASETFVSKDGKILCNKCATREDSPRCKGCFKAIVAGDQNVEYKGTVWHKD 141
Query: 455 CFHCSRCRSSLVDKPFAAKEDQVLCTDCYSQEYSSRCQECRKAIMPGTRKMEYKGSSWHE 634
CF CS C+ + F K + C C+ +++ C +C KAI G + Y+ WH
Sbjct: 142 CFTCSNCKQVIGTGSFFPKGEDFYCVTCHETKFAKHCVKCNKAITSGG--ITYQDQPWHA 199
Query: 635 TCFTCHRCQQPIGTKSFIPKDGQNFCVPCYEKQHALQCIQCKKPITSGG-----VTYREQ 799
CF C C + + + F + Q +CV CY+ A +C CK PIT G V Y Q
Sbjct: 200 ECFVCVTCSKKLAGQRFTAVEDQYYCVDCYKNFVAKKCAGCKNPITGFGKGSSVVAYEGQ 259
Query: 800 PWHRECFVCTACKKPLSGQRFTSRDEFAYCLGC 898
WH CF C C L+ +RF +E YC C
Sbjct: 260 SWHDYCFHCKKCSVNLANKRFVFHNEQVYCPDC 292
Score = 112 bits (280), Expect = 6e-25
Identities = 52/155 (33%), Positives = 76/155 (49%), Gaps = 3/155 (1%)
Frame = +2
Query: 275 FDCHHCENSLFGRKYVLREEQPYCVGCFEALFASTCEECGKLIGCDCKDLSYKDRHWHEA 454
F C +C+ + + + E YCV C E FA C +C K I ++Y+D+ WH
Sbjct: 143 FTCSNCKQVIGTGSFFPKGEDFYCVTCHETKFAKHCVKCNKAITSG--GITYQDQPWHAE 200
Query: 455 CFHCSRCRSSLVDKPFAAKEDQVLCTDCYSQEYSSRCQECRKAIM---PGTRKMEYKGSS 625
CF C C L + F A EDQ C DCY + +C C+ I G+ + Y+G S
Sbjct: 201 CFVCVTCSKKLAGQRFTAVEDQYYCVDCYKNFVAKKCAGCKNPITGFGKGSSVVAYEGQS 260
Query: 626 WHETCFTCHRCQQPIGTKSFIPKDGQNFCVPCYEK 730
WH+ CF C +C + K F+ + Q +C C +K
Sbjct: 261 WHDYCFHCKKCSVNLANKRFVFHNEQVYCPDCAKK 295
>ref|NP_034341.2| four and a half LIM domains protein 1 isoform 3 [Mus musculus].
Length = 280
Score = 275 bits (702), Expect = 7e-74
Identities = 111/231 (48%), Positives = 160/231 (69%)
Frame = +2
Query: 263 MTERFDCHHCENSLFGRKYVLREEQPYCVGCFEALFASTCEECGKLIGCDCKDLSYKDRH 442
M+E+FDCH+C + L G+KYV ++ + C+ CF+ A+TC +C K I D K++ YK+R+
Sbjct: 1 MSEKFDCHYCRDPLQGKKYVQKDGRHCCLKCFDKFCANTCVDCRKPISADAKEVHYKNRY 60
Query: 443 WHEACFHCSRCRSSLVDKPFAAKEDQVLCTDCYSQEYSSRCQECRKAIMPGTRKMEYKGS 622
WH+ CF C++C L + F +K+ ++LC C ++E S RC+ C KAI+ G + +EYKG+
Sbjct: 61 WHDNCFRCAKCLHPLASETFVSKDGKILCNKCATREDSPRCKGCFKAIVAGDQNVEYKGT 120
Query: 623 SWHETCFTCHRCQQPIGTKSFIPKDGQNFCVPCYEKQHALQCIQCKKPITSGGVTYREQP 802
WH+ CFTC C+Q IGT SF PK +CV C+E + A C++C K ITSGG+TY++QP
Sbjct: 121 VWHKDCFTCSNCKQVIGTGSFFPKGEDFYCVTCHETKFAKHCVKCNKAITSGGITYQDQP 180
Query: 803 WHRECFVCTACKKPLSGQRFTSRDEFAYCLGCFCDLYAKKCTGCANPISAF 955
WH ECFVC C K L+GQRFT+ ++ YC+ C+ + AKKC GC NPI+ F
Sbjct: 181 WHAECFVCVTCSKKLAGQRFTAVEDQYYCVDCYKNFVAKKCAGCKNPITGF 231
Score = 137 bits (345), Expect = 2e-32
Identities = 67/213 (31%), Positives = 98/213 (46%), Gaps = 5/213 (2%)
Frame = +2
Query: 275 FDCHHCENSLFGRKYVLREEQPYCVGCFEALFASTCEECGKLIGCDCKDLSYKDRHWHEA 454
F C C + L +V ++ + C C + C+ C K I +++ YK WH+
Sbjct: 66 FRCAKCLHPLASETFVSKDGKILCNKCATREDSPRCKGCFKAIVAGDQNVEYKGTVWHKD 125
Query: 455 CFHCSRCRSSLVDKPFAAKEDQVLCTDCYSQEYSSRCQECRKAIMPGTRKMEYKGSSWHE 634
CF CS C+ + F K + C C+ +++ C +C KAI G + Y+ WH
Sbjct: 126 CFTCSNCKQVIGTGSFFPKGEDFYCVTCHETKFAKHCVKCNKAITSGG--ITYQDQPWHA 183
Query: 635 TCFTCHRCQQPIGTKSFIPKDGQNFCVPCYEKQHALQCIQCKKPITSGG-----VTYREQ 799
CF C C + + + F + Q +CV CY+ A +C CK PIT G V Y Q
Sbjct: 184 ECFVCVTCSKKLAGQRFTAVEDQYYCVDCYKNFVAKKCAGCKNPITGFGKGSSVVAYEGQ 243
Query: 800 PWHRECFVCTACKKPLSGQRFTSRDEFAYCLGC 898
WH CF C C L+ +RF +E YC C
Sbjct: 244 SWHDYCFHCKKCSVNLANKRFVFHNEQVYCPDC 276
Score = 112 bits (280), Expect = 6e-25
Identities = 52/155 (33%), Positives = 76/155 (49%), Gaps = 3/155 (1%)
Frame = +2
Query: 275 FDCHHCENSLFGRKYVLREEQPYCVGCFEALFASTCEECGKLIGCDCKDLSYKDRHWHEA 454
F C +C+ + + + E YCV C E FA C +C K I ++Y+D+ WH
Sbjct: 127 FTCSNCKQVIGTGSFFPKGEDFYCVTCHETKFAKHCVKCNKAITSG--GITYQDQPWHAE 184
Query: 455 CFHCSRCRSSLVDKPFAAKEDQVLCTDCYSQEYSSRCQECRKAIM---PGTRKMEYKGSS 625
CF C C L + F A EDQ C DCY + +C C+ I G+ + Y+G S
Sbjct: 185 CFVCVTCSKKLAGQRFTAVEDQYYCVDCYKNFVAKKCAGCKNPITGFGKGSSVVAYEGQS 244
Query: 626 WHETCFTCHRCQQPIGTKSFIPKDGQNFCVPCYEK 730
WH+ CF C +C + K F+ + Q +C C +K
Sbjct: 245 WHDYCFHCKKCSVNLANKRFVFHNEQVYCPDCAKK 279
>ref|NP_001070829.1| four and a half LIM domains protein 1 isoform 1 [Mus musculus].
Length = 323
Score = 272 bits (696), Expect = 3e-73
Identities = 110/229 (48%), Positives = 159/229 (69%)
Frame = +2
Query: 263 MTERFDCHHCENSLFGRKYVLREEQPYCVGCFEALFASTCEECGKLIGCDCKDLSYKDRH 442
M+E+FDCH+C + L G+KYV ++ + C+ CF+ A+TC +C K I D K++ YK+R+
Sbjct: 1 MSEKFDCHYCRDPLQGKKYVQKDGRHCCLKCFDKFCANTCVDCRKPISADAKEVHYKNRY 60
Query: 443 WHEACFHCSRCRSSLVDKPFAAKEDQVLCTDCYSQEYSSRCQECRKAIMPGTRKMEYKGS 622
WH+ CF C++C L + F +K+ ++LC C ++E S RC+ C KAI+ G + +EYKG+
Sbjct: 61 WHDNCFRCAKCLHPLASETFVSKDGKILCNKCATREDSPRCKGCFKAIVAGDQNVEYKGT 120
Query: 623 SWHETCFTCHRCQQPIGTKSFIPKDGQNFCVPCYEKQHALQCIQCKKPITSGGVTYREQP 802
WH+ CFTC C+Q IGT SF PK +CV C+E + A C++C K ITSGG+TY++QP
Sbjct: 121 VWHKDCFTCSNCKQVIGTGSFFPKGEDFYCVTCHETKFAKHCVKCNKAITSGGITYQDQP 180
Query: 803 WHRECFVCTACKKPLSGQRFTSRDEFAYCLGCFCDLYAKKCTGCANPIS 949
WH ECFVC C K L+GQRFT+ ++ YC+ C+ + AKKC GC NPI+
Sbjct: 181 WHAECFVCVTCSKKLAGQRFTAVEDQYYCVDCYKNFVAKKCAGCKNPIT 229
Score = 125 bits (315), Expect = 5e-29
Identities = 53/167 (31%), Positives = 88/167 (52%), Gaps = 2/167 (1%)
Frame = +2
Query: 458 FHCSRCRSSLVDKPFAAKEDQVLCTDCYSQEYSSRCQECRKAIMPGTRKMEYKGSSWHET 637
F C CR L K + K+ + C C+ + ++ C +CRK I +++ YK WH+
Sbjct: 5 FDCHYCRDPLQGKKYVQKDGRHCCLKCFDKFCANTCVDCRKPISADAKEVHYKNRYWHDN 64
Query: 638 CFTCHRCQQPIGTKSFIPKDGQNFCVPCYEKQHALQCIQCKKPITSG--GVTYREQPWHR 811
CF C +C P+ +++F+ KDG+ C C ++ + +C C K I +G V Y+ WH+
Sbjct: 65 CFRCAKCLHPLASETFVSKDGKILCNKCATREDSPRCKGCFKAIVAGDQNVEYKGTVWHK 124
Query: 812 ECFVCTACKKPLSGQRFTSRDEFAYCLGCFCDLYAKKCTGCANPISA 952
+CF C+ CK+ + F + E YC+ C +AK C C I++
Sbjct: 125 DCFTCSNCKQVIGTGSFFPKGEDFYCVTCHETKFAKHCVKCNKAITS 171
>ref|NP_034344.2| four and a half LIM domains 4 [Mus musculus].
Length = 279
Score = 269 bits (687), Expect = 4e-72
Identities = 112/227 (49%), Positives = 150/227 (66%)
Frame = +2
Query: 275 FDCHHCENSLFGRKYVLREEQPYCVGCFEALFASTCEECGKLIGCDCKDLSYKDRHWHEA 454
F CHHCE SL G+KYV ++ YCV CF++ A+ C+EC K IG D K++ YK++ WH
Sbjct: 4 FKCHHCEESLQGKKYVQKDGANYCVTCFDSHCANICQECHKPIGADSKEVCYKEQFWHNT 63
Query: 455 CFHCSRCRSSLVDKPFAAKEDQVLCTDCYSQEYSSRCQECRKAIMPGTRKMEYKGSSWHE 634
CF CS+C L + F A + +LC C ++ +C+ C K I G +EYKGS WH+
Sbjct: 64 CFKCSKCSQLLATETFVAWDKNILCNKCATRVTFPKCKGCLKDIEEGDHNVEYKGSIWHK 123
Query: 635 TCFTCHRCQQPIGTKSFIPKDGQNFCVPCYEKQHALQCIQCKKPITSGGVTYREQPWHRE 814
CF C C+ IGTK+F PKD +CV CY+ C++CKKPITSGGV+Y++QPWH E
Sbjct: 124 NCFVCTNCKDIIGTKNFFPKDEGFYCVTCYDALFTKHCMKCKKPITSGGVSYQDQPWHSE 183
Query: 815 CFVCTACKKPLSGQRFTSRDEFAYCLGCFCDLYAKKCTGCANPISAF 955
CFVC +C K LSGQRFT+ D+ +C+ C+ + AKKC GC NPI+ F
Sbjct: 184 CFVCVSCSKELSGQRFTAMDDQYFCVDCYKNYIAKKCAGCKNPITGF 230
Score = 68.2 bits (165), Expect = 1e-11
Identities = 29/94 (30%), Positives = 48/94 (51%), Gaps = 3/94 (3%)
Frame = +2
Query: 266 TERFDCHHCENSLFGRKYVLREEQPYCVGCFEALFASTCEECGKLI---GCDCKDLSYKD 436
+E F C C L G+++ ++Q +CV C++ A C C I G ++++
Sbjct: 182 SECFVCVSCSKELSGQRFTAMDDQYFCVDCYKNYIAKKCAGCKNPITGFGKGANVVAHEQ 241
Query: 437 RHWHEACFHCSRCRSSLVDKPFAAKEDQVLCTDC 538
WH+ CF+C C +L +K F ++QV C DC
Sbjct: 242 NSWHDYCFNCKTCSVNLANKHFVFHDEQVYCPDC 275
>ref|NP_598676.2| paxillin isoform beta [Mus musculus].
Length = 591
Score = 131 bits (330), Expect = 1e-30
Identities = 67/216 (31%), Positives = 103/216 (47%), Gaps = 1/216 (0%)
Frame = +2
Query: 269 ERFDCHHCENSLFGRKYVLREEQPYCVGCFEALFASTCEEC-GKLIGCDCKDLSYKDRHW 445
E F C HC+ + R + R+ QPYC + +LF+ C C G ++ K ++ DR W
Sbjct: 380 EHFVCTHCQEEIGSRNFFERDGQPYCEKDYHSLFSPRCYYCNGPILD---KVVTALDRTW 436
Query: 446 HEACFHCSRCRSSLVDKPFAAKEDQVLCTDCYSQEYSSRCQECRKAIMPGTRKMEYKGSS 625
H F C++C + + F K+ + C Y ++ +C C +AI+ + +
Sbjct: 437 HPEHFFCAQCGAFFGPEGFHEKDGKAYCRKDYFDMFAPKCGGCARAILENY--ISALNTL 494
Query: 626 WHETCFTCHRCQQPIGTKSFIPKDGQNFCVPCYEKQHALQCIQCKKPITSGGVTYREQPW 805
WH CF C C P SF DGQ +C Y ++ C C+KPIT +T + +
Sbjct: 495 WHPECFVCRECFTPFVNGSFFEHDGQPYCEVHYHERRGSLCSGCQKPITGRCITAMAKKF 554
Query: 806 HRECFVCTACKKPLSGQRFTSRDEFAYCLGCFCDLY 913
H E FVC C K L+ F +++ YC CF L+
Sbjct: 555 HPEHFVCAFCLKQLNKGTFKEQNDKPYCQSCFVKLF 590
Score = 92.4 bits (228), Expect = 6e-19
Identities = 48/169 (28%), Positives = 71/169 (42%)
Frame = +2
Query: 443 WHEACFHCSRCRSSLVDKPFAAKEDQVLCTDCYSQEYSSRCQECRKAIMPGTRKMEYKGS 622
WH F C+ C+ + + F ++ Q C Y +S RC C I+ + +
Sbjct: 377 WHPEHFVCTHCQEEIGSRNFFERDGQPYCEKDYHSLFSPRCYYCNGPILD--KVVTALDR 434
Query: 623 SWHETCFTCHRCQQPIGTKSFIPKDGQNFCVPCYEKQHALQCIQCKKPITSGGVTYREQP 802
+WH F C +C G + F KDG+ +C Y A +C C + I ++
Sbjct: 435 TWHPEHFFCAQCGAFFGPEGFHEKDGKAYCRKDYFDMFAPKCGGCARAILENYISALNTL 494
Query: 803 WHRECFVCTACKKPLSGQRFTSRDEFAYCLGCFCDLYAKKCTGCANPIS 949
WH ECFVC C P F D YC + + C+GC PI+
Sbjct: 495 WHPECFVCRECFTPFVNGSFFEHDGQPYCEVHYHERRGSLCSGCQKPIT 543
Score = 92.0 bits (227), Expect = 8e-19
Identities = 44/128 (34%), Positives = 63/128 (49%)
Frame = +2
Query: 563 CQECRKAIMPGTRKMEYKGSSWHETCFTCHRCQQPIGTKSFIPKDGQNFCVPCYEKQHAL 742
C C+K I + + G +WH F C CQ+ IG+++F +DGQ +C Y +
Sbjct: 358 CGACKKPI--AGQVVTAMGKTWHPEHFVCTHCQEEIGSRNFFERDGQPYCEKDYHSLFSP 415
Query: 743 QCIQCKKPITSGGVTYREQPWHRECFVCTACKKPLSGQRFTSRDEFAYCLGCFCDLYAKK 922
+C C PI VT ++ WH E F C C + F +D AYC + D++A K
Sbjct: 416 RCYYCNGPILDKVVTALDRTWHPEHFFCAQCGAFFGPEGFHEKDGKAYCRKDYFDMFAPK 475
Query: 923 CTGCANPI 946
C GCA I
Sbjct: 476 CGGCARAI 483
>ref|NP_035353.1| paxillin isoform alpha [Mus musculus].
Length = 557
Score = 131 bits (330), Expect = 1e-30
Identities = 67/216 (31%), Positives = 103/216 (47%), Gaps = 1/216 (0%)
Frame = +2
Query: 269 ERFDCHHCENSLFGRKYVLREEQPYCVGCFEALFASTCEEC-GKLIGCDCKDLSYKDRHW 445
E F C HC+ + R + R+ QPYC + +LF+ C C G ++ K ++ DR W
Sbjct: 346 EHFVCTHCQEEIGSRNFFERDGQPYCEKDYHSLFSPRCYYCNGPILD---KVVTALDRTW 402
Query: 446 HEACFHCSRCRSSLVDKPFAAKEDQVLCTDCYSQEYSSRCQECRKAIMPGTRKMEYKGSS 625
H F C++C + + F K+ + C Y ++ +C C +AI+ + +
Sbjct: 403 HPEHFFCAQCGAFFGPEGFHEKDGKAYCRKDYFDMFAPKCGGCARAILENY--ISALNTL 460
Query: 626 WHETCFTCHRCQQPIGTKSFIPKDGQNFCVPCYEKQHALQCIQCKKPITSGGVTYREQPW 805
WH CF C C P SF DGQ +C Y ++ C C+KPIT +T + +
Sbjct: 461 WHPECFVCRECFTPFVNGSFFEHDGQPYCEVHYHERRGSLCSGCQKPITGRCITAMAKKF 520
Query: 806 HRECFVCTACKKPLSGQRFTSRDEFAYCLGCFCDLY 913
H E FVC C K L+ F +++ YC CF L+
Sbjct: 521 HPEHFVCAFCLKQLNKGTFKEQNDKPYCQSCFVKLF 556
Score = 92.4 bits (228), Expect = 6e-19
Identities = 48/169 (28%), Positives = 71/169 (42%)
Frame = +2
Query: 443 WHEACFHCSRCRSSLVDKPFAAKEDQVLCTDCYSQEYSSRCQECRKAIMPGTRKMEYKGS 622
WH F C+ C+ + + F ++ Q C Y +S RC C I+ + +
Sbjct: 343 WHPEHFVCTHCQEEIGSRNFFERDGQPYCEKDYHSLFSPRCYYCNGPILD--KVVTALDR 400
Query: 623 SWHETCFTCHRCQQPIGTKSFIPKDGQNFCVPCYEKQHALQCIQCKKPITSGGVTYREQP 802
+WH F C +C G + F KDG+ +C Y A +C C + I ++
Sbjct: 401 TWHPEHFFCAQCGAFFGPEGFHEKDGKAYCRKDYFDMFAPKCGGCARAILENYISALNTL 460
Query: 803 WHRECFVCTACKKPLSGQRFTSRDEFAYCLGCFCDLYAKKCTGCANPIS 949
WH ECFVC C P F D YC + + C+GC PI+
Sbjct: 461 WHPECFVCRECFTPFVNGSFFEHDGQPYCEVHYHERRGSLCSGCQKPIT 509
Score = 92.0 bits (227), Expect = 8e-19
Identities = 44/128 (34%), Positives = 63/128 (49%)
Frame = +2
Query: 563 CQECRKAIMPGTRKMEYKGSSWHETCFTCHRCQQPIGTKSFIPKDGQNFCVPCYEKQHAL 742
C C+K I + + G +WH F C CQ+ IG+++F +DGQ +C Y +
Sbjct: 324 CGACKKPI--AGQVVTAMGKTWHPEHFVCTHCQEEIGSRNFFERDGQPYCEKDYHSLFSP 381
Query: 743 QCIQCKKPITSGGVTYREQPWHRECFVCTACKKPLSGQRFTSRDEFAYCLGCFCDLYAKK 922
+C C PI VT ++ WH E F C C + F +D AYC + D++A K
Sbjct: 382 RCYYCNGPILDKVVTALDRTWHPEHFFCAQCGAFFGPEGFHEKDGKAYCRKDYFDMFAPK 441
Query: 923 CTGCANPI 946
C GCA I
Sbjct: 442 CGGCARAI 449
>ref|NP_001180232.1| LIM and senescent cell antigen-like-containing domain protein 1
isoform 3 [Mus musculus].
Length = 396
Score = 114 bits (285), Expect = 2e-25
Identities = 67/226 (29%), Positives = 99/226 (43%), Gaps = 6/226 (2%)
Frame = +2
Query: 275 FDCHHCENSLFGRKYVLREEQPYCVGCFEALFASTCEECGK-LIGCDCKDLSYKDRHWHE 451
F C C + E + YC F+ LFA C +CG+ +IG K ++ WH
Sbjct: 98 FVCAQCFQQFPEGLFYEFEGRKYCEHDFQMLFAPCCHQCGEFIIGRVIKAMN---NSWHP 154
Query: 452 ACFHCSRCRSSLVDKPFAAKEDQVLCTDCYSQEYSSR-----CQECRKAIMPGTRKMEYK 616
CF C C+ L D F + LC C+++E + CQ+C I + + +K
Sbjct: 155 ECFRCDLCQEVLADIGFVKNAGRHLCRPCHNREKARGLGKYICQKCHAII--DEQPLIFK 212
Query: 617 GSSWHETCFTCHRCQQPIGTKSFIPKDGQNFCVPCYEKQHALQCIQCKKPITSGGVTYRE 796
+H F C C + + T G+ +C+PC++K C C++PI V
Sbjct: 213 NDPYHPDHFNCANCGKEL-TADARELKGELYCLPCHDKMGVPICGACRRPIEGRVVNAMG 271
Query: 797 QPWHRECFVCTACKKPLSGQRFTSRDEFAYCLGCFCDLYAKKCTGC 934
+ WH E FVC C+KP G R R AYC + L+ C C
Sbjct: 272 KQWHVEHFVCAKCEKPFLGHRHYERKGLAYCETHYNQLFGDVCFHC 317
Score = 94.7 bits (234), Expect = 1e-19
Identities = 53/200 (26%), Positives = 88/200 (44%), Gaps = 5/200 (2%)
Frame = +2
Query: 362 ALFASTCEECGKLIGCDCKDLSYKDRHWHEACFHCSRCRSSLVDKPFAAKEDQVLCTDCY 541
AL ++TCE C K ++ +HE CF C++C + F E + C +
Sbjct: 66 ALASATCERCKGGFAPAEKIVNSNGELYHEQCFVCAQCFQQFPEGLFYEFEGRKYCEHDF 125
Query: 542 SQEYSSRCQECRKAIMPGTRKMEYKGSSWHETCFTCHRCQQPIGTKSFIPKDGQNFCVPC 721
++ C +C + I+ R ++ +SWH CF C CQ+ + F+ G++ C PC
Sbjct: 126 QMLFAPCCHQCGEFII--GRVIKAMNNSWHPECFRCDLCQEVLADIGFVKNAGRHLCRPC 183
Query: 722 YEKQHA-----LQCIQCKKPITSGGVTYREQPWHRECFVCTACKKPLSGQRFTSRDEFAY 886
+ ++ A C +C I + ++ P+H + F C C K L+ + E Y
Sbjct: 184 HNREKARGLGKYICQKCHAIIDEQPLIFKNDPYHPDHFNCANCGKELTADARELKGEL-Y 242
Query: 887 CLGCFCDLYAKKCTGCANPI 946
CL C + C C PI
Sbjct: 243 CLPCHDKMGVPICGACRRPI 262
Score = 73.2 bits (178), Expect = 4e-13
Identities = 52/217 (23%), Positives = 83/217 (38%), Gaps = 6/217 (2%)
Frame = +2
Query: 269 ERFDCHHCENSLFGRKYVLREEQPYCVGCFE-----ALFASTCEECGKLIGCDCKDLSYK 433
E F C C+ L +V + C C L C++C +I D + L +K
Sbjct: 155 ECFRCDLCQEVLADIGFVKNAGRHLCRPCHNREKARGLGKYICQKCHAII--DEQPLIFK 212
Query: 434 DRHWHEACFHCSRCRSSLVDKPFAAKEDQVLCTDCYSQEYSSRCQECRKAIMPGTRKMEY 613
+ +H F+C+ C L K ++ C C+ + C CR+ I R +
Sbjct: 213 NDPYHPDHFNCANCGKELTADARELK-GELYCLPCHDKMGVPICGACRRPIEG--RVVNA 269
Query: 614 KGSSWHETCFTCHRCQQPIGTKSFIPKDGQNFCVPCYEKQHALQCIQCKKPITSGGVTYR 793
G WH F C +C++P + G +C Y + C C + I V+
Sbjct: 270 MGKQWHVEHFVCAKCEKPFLGHRHYERKGLAYCETHYNQLFGDVCFHCNRVIEGDVVSAL 329
Query: 794 EQPWHRECFVCTACKKPLS-GQRFTSRDEFAYCLGCF 901
+ W CF C+ C L+ +F D C C+
Sbjct: 330 NKAWCVSCFACSTCNTKLTLKDKFVEIDLKPVCKYCY 366
Database: RefSeq49_MP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 15,617,559
Number of sequences in database: 30,036
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 30036
Number of Hits to DB: 37,924,897
Number of extensions: 1022936
Number of successful extensions: 10278
Number of sequences better than 1.0e-05: 119
Number of HSP's gapped: 7291
Number of HSP's successfully gapped: 264
Length of query: 414
Length of database: 15,617,559
Length adjustment: 104
Effective length of query: 310
Effective length of database: 12,493,815
Effective search space: 3873082650
Effective search space used: 3873082650
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to RefSeqHP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-014700
(1244 letters)
Database: RefSeq49_HP.fasta
32,964 sequences; 18,297,164 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001034581.1| four and a half LIM domains protein 2 [Homo ... 473 e-133
Alignment gi|NP_963851.2| four and a half LIM domains protein 2 [Homo sap... 473 e-133
Alignment gi|NP_963849.1| four and a half LIM domains protein 2 [Homo sap... 473 e-133
Alignment gi|NP_001441.4| four and a half LIM domains protein 2 [Homo sap... 473 e-133
Alignment gi|NP_001164278.1| four and a half LIM domains protein 5 [Homo ... 315 6e-86
Alignment gi|NP_065228.4| four and a half LIM domains protein 5 [Homo sap... 315 6e-86
Alignment gi|NP_004459.2| four and a half LIM domains protein 3 isoform 1... 313 2e-85
Alignment gi|NP_001153176.1| four and a half LIM domains protein 1 isofor... 276 2e-74
Alignment gi|NP_001153172.1| four and a half LIM domains protein 1 isofor... 276 2e-74
Alignment gi|NP_001161291.1| four and a half LIM domains protein 1 isofor... 276 2e-74
>ref|NP_001034581.1| four and a half LIM domains protein 2 [Homo sapiens].
Length = 279
Score = 473 bits (1216), Expect = e-133
Identities = 200/229 (87%), Positives = 215/229 (93%)
Frame = +2
Query: 263 MTERFDCHHCENSLFGRKYVLREEQPYCVGCFEALFASTCEECGKLIGCDCKDLSYKDRH 442
MTERFDCHHC SLFG+KY+LREE PYCV CFE LFA+TCEECGK IGCDCKDLSYKDRH
Sbjct: 1 MTERFDCHHCNESLFGKKYILREESPYCVVCFETLFANTCEECGKPIGCDCKDLSYKDRH 60
Query: 443 WHEACFHCSRCRSSLVDKPFAAKEDQVLCTDCYSQEYSSRCQECRKAIMPGTRKMEYKGS 622
WHEACFHCS+CR+SLVDKPFAAKEDQ+LCTDCYS EYSS+CQEC+K IMPGTRKMEYKGS
Sbjct: 61 WHEACFHCSQCRNSLVDKPFAAKEDQLLCTDCYSNEYSSKCQECKKTIMPGTRKMEYKGS 120
Query: 623 SWHETCFTCHRCQQPIGTKSFIPKDGQNFCVPCYEKQHALQCIQCKKPITSGGVTYREQP 802
SWHETCF CHRCQQPIGTKSFIPKD QNFCVPCYEKQHA+QC+QCKKPIT+GGVTYREQP
Sbjct: 121 SWHETCFICHRCQQPIGTKSFIPKDNQNFCVPCYEKQHAMQCVQCKKPITTGGVTYREQP 180
Query: 803 WHRECFVCTACKKPLSGQRFTSRDEFAYCLGCFCDLYAKKCTGCANPIS 949
WH+ECFVCTAC+K LSGQRFT+RD+FAYCL CFCDLYAKKC GC NPIS
Sbjct: 181 WHKECFVCTACRKQLSGQRFTARDDFAYCLNCFCDLYAKKCAGCTNPIS 229
Score = 159 bits (403), Expect = 4e-39
Identities = 68/216 (31%), Positives = 112/216 (51%), Gaps = 4/216 (1%)
Frame = +2
Query: 275 FDCHHCENSLFGRKYVLREEQPYCVGCFEALFASTCEECGKLIGCDCKDLSYKDRHWHEA 454
F C C NSL + + +E+Q C C+ ++S C+EC K I + + YK WHE
Sbjct: 66 FHCSQCRNSLVDKPFAAKEDQLLCTDCYSNEYSSKCQECKKTIMPGTRKMEYKGSSWHET 125
Query: 455 CFHCSRCRSSLVDKPFAAKEDQVLCTDCYSQEYSSRCQECRKAIMPGTRKMEYKGSSWHE 634
CF C RC+ + K F K++Q C CY ++++ +C +C+K I G + Y+ WH+
Sbjct: 126 CFICHRCQQPIGTKSFIPKDNQNFCVPCYEKQHAMQCVQCKKPITTGG--VTYREQPWHK 183
Query: 635 TCFTCHRCQQPIGTKSFIPKDGQNFCVPCYEKQHALQCIQCKKPITSGG----VTYREQP 802
CF C C++ + + F +D +C+ C+ +A +C C PI+ G +++ E+
Sbjct: 184 ECFVCTACRKQLSGQRFTARDDFAYCLNCFCDLYAKKCAGCTNPISGLGGTKYISFEERQ 243
Query: 803 WHRECFVCTACKKPLSGQRFTSRDEFAYCLGCFCDL 910
WH +CF C C L G+ F + + C C D+
Sbjct: 244 WHNDCFNCKKCSLSLVGRGFLTERDDILCPDCGKDI 279
Score = 78.2 bits (191), Expect = 1e-14
Identities = 34/92 (36%), Positives = 50/92 (54%), Gaps = 2/92 (2%)
Frame = +2
Query: 269 ERFDCHHCENSLFGRKYVLREEQPYCVGCFEALFASTCEECGKLIGC--DCKDLSYKDRH 442
E F C C L G+++ R++ YC+ CF L+A C C I K +S+++R
Sbjct: 184 ECFVCTACRKQLSGQRFTARDDFAYCLNCFCDLYAKKCAGCTNPISGLGGTKYISFEERQ 243
Query: 443 WHEACFHCSRCRSSLVDKPFAAKEDQVLCTDC 538
WH CF+C +C SLV + F + D +LC DC
Sbjct: 244 WHNDCFNCKKCSLSLVGRGFLTERDDILCPDC 275
>ref|NP_963851.2| four and a half LIM domains protein 2 [Homo sapiens].
Length = 279
Score = 473 bits (1216), Expect = e-133
Identities = 200/229 (87%), Positives = 215/229 (93%)
Frame = +2
Query: 263 MTERFDCHHCENSLFGRKYVLREEQPYCVGCFEALFASTCEECGKLIGCDCKDLSYKDRH 442
MTERFDCHHC SLFG+KY+LREE PYCV CFE LFA+TCEECGK IGCDCKDLSYKDRH
Sbjct: 1 MTERFDCHHCNESLFGKKYILREESPYCVVCFETLFANTCEECGKPIGCDCKDLSYKDRH 60
Query: 443 WHEACFHCSRCRSSLVDKPFAAKEDQVLCTDCYSQEYSSRCQECRKAIMPGTRKMEYKGS 622
WHEACFHCS+CR+SLVDKPFAAKEDQ+LCTDCYS EYSS+CQEC+K IMPGTRKMEYKGS
Sbjct: 61 WHEACFHCSQCRNSLVDKPFAAKEDQLLCTDCYSNEYSSKCQECKKTIMPGTRKMEYKGS 120
Query: 623 SWHETCFTCHRCQQPIGTKSFIPKDGQNFCVPCYEKQHALQCIQCKKPITSGGVTYREQP 802
SWHETCF CHRCQQPIGTKSFIPKD QNFCVPCYEKQHA+QC+QCKKPIT+GGVTYREQP
Sbjct: 121 SWHETCFICHRCQQPIGTKSFIPKDNQNFCVPCYEKQHAMQCVQCKKPITTGGVTYREQP 180
Query: 803 WHRECFVCTACKKPLSGQRFTSRDEFAYCLGCFCDLYAKKCTGCANPIS 949
WH+ECFVCTAC+K LSGQRFT+RD+FAYCL CFCDLYAKKC GC NPIS
Sbjct: 181 WHKECFVCTACRKQLSGQRFTARDDFAYCLNCFCDLYAKKCAGCTNPIS 229
Score = 159 bits (403), Expect = 4e-39
Identities = 68/216 (31%), Positives = 112/216 (51%), Gaps = 4/216 (1%)
Frame = +2
Query: 275 FDCHHCENSLFGRKYVLREEQPYCVGCFEALFASTCEECGKLIGCDCKDLSYKDRHWHEA 454
F C C NSL + + +E+Q C C+ ++S C+EC K I + + YK WHE
Sbjct: 66 FHCSQCRNSLVDKPFAAKEDQLLCTDCYSNEYSSKCQECKKTIMPGTRKMEYKGSSWHET 125
Query: 455 CFHCSRCRSSLVDKPFAAKEDQVLCTDCYSQEYSSRCQECRKAIMPGTRKMEYKGSSWHE 634
CF C RC+ + K F K++Q C CY ++++ +C +C+K I G + Y+ WH+
Sbjct: 126 CFICHRCQQPIGTKSFIPKDNQNFCVPCYEKQHAMQCVQCKKPITTGG--VTYREQPWHK 183
Query: 635 TCFTCHRCQQPIGTKSFIPKDGQNFCVPCYEKQHALQCIQCKKPITSGG----VTYREQP 802
CF C C++ + + F +D +C+ C+ +A +C C PI+ G +++ E+
Sbjct: 184 ECFVCTACRKQLSGQRFTARDDFAYCLNCFCDLYAKKCAGCTNPISGLGGTKYISFEERQ 243
Query: 803 WHRECFVCTACKKPLSGQRFTSRDEFAYCLGCFCDL 910
WH +CF C C L G+ F + + C C D+
Sbjct: 244 WHNDCFNCKKCSLSLVGRGFLTERDDILCPDCGKDI 279
Score = 78.2 bits (191), Expect = 1e-14
Identities = 34/92 (36%), Positives = 50/92 (54%), Gaps = 2/92 (2%)
Frame = +2
Query: 269 ERFDCHHCENSLFGRKYVLREEQPYCVGCFEALFASTCEECGKLIGC--DCKDLSYKDRH 442
E F C C L G+++ R++ YC+ CF L+A C C I K +S+++R
Sbjct: 184 ECFVCTACRKQLSGQRFTARDDFAYCLNCFCDLYAKKCAGCTNPISGLGGTKYISFEERQ 243
Query: 443 WHEACFHCSRCRSSLVDKPFAAKEDQVLCTDC 538
WH CF+C +C SLV + F + D +LC DC
Sbjct: 244 WHNDCFNCKKCSLSLVGRGFLTERDDILCPDC 275
>ref|NP_963849.1| four and a half LIM domains protein 2 [Homo sapiens].
Length = 279
Score = 473 bits (1216), Expect = e-133
Identities = 200/229 (87%), Positives = 215/229 (93%)
Frame = +2
Query: 263 MTERFDCHHCENSLFGRKYVLREEQPYCVGCFEALFASTCEECGKLIGCDCKDLSYKDRH 442
MTERFDCHHC SLFG+KY+LREE PYCV CFE LFA+TCEECGK IGCDCKDLSYKDRH
Sbjct: 1 MTERFDCHHCNESLFGKKYILREESPYCVVCFETLFANTCEECGKPIGCDCKDLSYKDRH 60
Query: 443 WHEACFHCSRCRSSLVDKPFAAKEDQVLCTDCYSQEYSSRCQECRKAIMPGTRKMEYKGS 622
WHEACFHCS+CR+SLVDKPFAAKEDQ+LCTDCYS EYSS+CQEC+K IMPGTRKMEYKGS
Sbjct: 61 WHEACFHCSQCRNSLVDKPFAAKEDQLLCTDCYSNEYSSKCQECKKTIMPGTRKMEYKGS 120
Query: 623 SWHETCFTCHRCQQPIGTKSFIPKDGQNFCVPCYEKQHALQCIQCKKPITSGGVTYREQP 802
SWHETCF CHRCQQPIGTKSFIPKD QNFCVPCYEKQHA+QC+QCKKPIT+GGVTYREQP
Sbjct: 121 SWHETCFICHRCQQPIGTKSFIPKDNQNFCVPCYEKQHAMQCVQCKKPITTGGVTYREQP 180
Query: 803 WHRECFVCTACKKPLSGQRFTSRDEFAYCLGCFCDLYAKKCTGCANPIS 949
WH+ECFVCTAC+K LSGQRFT+RD+FAYCL CFCDLYAKKC GC NPIS
Sbjct: 181 WHKECFVCTACRKQLSGQRFTARDDFAYCLNCFCDLYAKKCAGCTNPIS 229
Score = 159 bits (403), Expect = 4e-39
Identities = 68/216 (31%), Positives = 112/216 (51%), Gaps = 4/216 (1%)
Frame = +2
Query: 275 FDCHHCENSLFGRKYVLREEQPYCVGCFEALFASTCEECGKLIGCDCKDLSYKDRHWHEA 454
F C C NSL + + +E+Q C C+ ++S C+EC K I + + YK WHE
Sbjct: 66 FHCSQCRNSLVDKPFAAKEDQLLCTDCYSNEYSSKCQECKKTIMPGTRKMEYKGSSWHET 125
Query: 455 CFHCSRCRSSLVDKPFAAKEDQVLCTDCYSQEYSSRCQECRKAIMPGTRKMEYKGSSWHE 634
CF C RC+ + K F K++Q C CY ++++ +C +C+K I G + Y+ WH+
Sbjct: 126 CFICHRCQQPIGTKSFIPKDNQNFCVPCYEKQHAMQCVQCKKPITTGG--VTYREQPWHK 183
Query: 635 TCFTCHRCQQPIGTKSFIPKDGQNFCVPCYEKQHALQCIQCKKPITSGG----VTYREQP 802
CF C C++ + + F +D +C+ C+ +A +C C PI+ G +++ E+
Sbjct: 184 ECFVCTACRKQLSGQRFTARDDFAYCLNCFCDLYAKKCAGCTNPISGLGGTKYISFEERQ 243
Query: 803 WHRECFVCTACKKPLSGQRFTSRDEFAYCLGCFCDL 910
WH +CF C C L G+ F + + C C D+
Sbjct: 244 WHNDCFNCKKCSLSLVGRGFLTERDDILCPDCGKDI 279
Score = 78.2 bits (191), Expect = 1e-14
Identities = 34/92 (36%), Positives = 50/92 (54%), Gaps = 2/92 (2%)
Frame = +2
Query: 269 ERFDCHHCENSLFGRKYVLREEQPYCVGCFEALFASTCEECGKLIGC--DCKDLSYKDRH 442
E F C C L G+++ R++ YC+ CF L+A C C I K +S+++R
Sbjct: 184 ECFVCTACRKQLSGQRFTARDDFAYCLNCFCDLYAKKCAGCTNPISGLGGTKYISFEERQ 243
Query: 443 WHEACFHCSRCRSSLVDKPFAAKEDQVLCTDC 538
WH CF+C +C SLV + F + D +LC DC
Sbjct: 244 WHNDCFNCKKCSLSLVGRGFLTERDDILCPDC 275
>ref|NP_001441.4| four and a half LIM domains protein 2 [Homo sapiens].
Length = 279
Score = 473 bits (1216), Expect = e-133
Identities = 200/229 (87%), Positives = 215/229 (93%)
Frame = +2
Query: 263 MTERFDCHHCENSLFGRKYVLREEQPYCVGCFEALFASTCEECGKLIGCDCKDLSYKDRH 442
MTERFDCHHC SLFG+KY+LREE PYCV CFE LFA+TCEECGK IGCDCKDLSYKDRH
Sbjct: 1 MTERFDCHHCNESLFGKKYILREESPYCVVCFETLFANTCEECGKPIGCDCKDLSYKDRH 60
Query: 443 WHEACFHCSRCRSSLVDKPFAAKEDQVLCTDCYSQEYSSRCQECRKAIMPGTRKMEYKGS 622
WHEACFHCS+CR+SLVDKPFAAKEDQ+LCTDCYS EYSS+CQEC+K IMPGTRKMEYKGS
Sbjct: 61 WHEACFHCSQCRNSLVDKPFAAKEDQLLCTDCYSNEYSSKCQECKKTIMPGTRKMEYKGS 120
Query: 623 SWHETCFTCHRCQQPIGTKSFIPKDGQNFCVPCYEKQHALQCIQCKKPITSGGVTYREQP 802
SWHETCF CHRCQQPIGTKSFIPKD QNFCVPCYEKQHA+QC+QCKKPIT+GGVTYREQP
Sbjct: 121 SWHETCFICHRCQQPIGTKSFIPKDNQNFCVPCYEKQHAMQCVQCKKPITTGGVTYREQP 180
Query: 803 WHRECFVCTACKKPLSGQRFTSRDEFAYCLGCFCDLYAKKCTGCANPIS 949
WH+ECFVCTAC+K LSGQRFT+RD+FAYCL CFCDLYAKKC GC NPIS
Sbjct: 181 WHKECFVCTACRKQLSGQRFTARDDFAYCLNCFCDLYAKKCAGCTNPIS 229
Score = 159 bits (403), Expect = 4e-39
Identities = 68/216 (31%), Positives = 112/216 (51%), Gaps = 4/216 (1%)
Frame = +2
Query: 275 FDCHHCENSLFGRKYVLREEQPYCVGCFEALFASTCEECGKLIGCDCKDLSYKDRHWHEA 454
F C C NSL + + +E+Q C C+ ++S C+EC K I + + YK WHE
Sbjct: 66 FHCSQCRNSLVDKPFAAKEDQLLCTDCYSNEYSSKCQECKKTIMPGTRKMEYKGSSWHET 125
Query: 455 CFHCSRCRSSLVDKPFAAKEDQVLCTDCYSQEYSSRCQECRKAIMPGTRKMEYKGSSWHE 634
CF C RC+ + K F K++Q C CY ++++ +C +C+K I G + Y+ WH+
Sbjct: 126 CFICHRCQQPIGTKSFIPKDNQNFCVPCYEKQHAMQCVQCKKPITTGG--VTYREQPWHK 183
Query: 635 TCFTCHRCQQPIGTKSFIPKDGQNFCVPCYEKQHALQCIQCKKPITSGG----VTYREQP 802
CF C C++ + + F +D +C+ C+ +A +C C PI+ G +++ E+
Sbjct: 184 ECFVCTACRKQLSGQRFTARDDFAYCLNCFCDLYAKKCAGCTNPISGLGGTKYISFEERQ 243
Query: 803 WHRECFVCTACKKPLSGQRFTSRDEFAYCLGCFCDL 910
WH +CF C C L G+ F + + C C D+
Sbjct: 244 WHNDCFNCKKCSLSLVGRGFLTERDDILCPDCGKDI 279
Score = 78.2 bits (191), Expect = 1e-14
Identities = 34/92 (36%), Positives = 50/92 (54%), Gaps = 2/92 (2%)
Frame = +2
Query: 269 ERFDCHHCENSLFGRKYVLREEQPYCVGCFEALFASTCEECGKLIGC--DCKDLSYKDRH 442
E F C C L G+++ R++ YC+ CF L+A C C I K +S+++R
Sbjct: 184 ECFVCTACRKQLSGQRFTARDDFAYCLNCFCDLYAKKCAGCTNPISGLGGTKYISFEERQ 243
Query: 443 WHEACFHCSRCRSSLVDKPFAAKEDQVLCTDC 538
WH CF+C +C SLV + F + D +LC DC
Sbjct: 244 WHNDCFNCKKCSLSLVGRGFLTERDDILCPDC 275
>ref|NP_001164278.1| four and a half LIM domains protein 5 [Homo sapiens].
Length = 284
Score = 315 bits (807), Expect = 6e-86
Identities = 128/228 (56%), Positives = 172/228 (75%)
Frame = +2
Query: 266 TERFDCHHCENSLFGRKYVLREEQPYCVGCFEALFASTCEECGKLIGCDCKDLSYKDRHW 445
T F C +C SL G+KYVL+++ PYCV C++ +F++ CEEC K I D KDL YKDRHW
Sbjct: 3 TAHFYCQYCTASLLGKKYVLKDDSPYCVTCYDRVFSNYCEECKKPIESDSKDLCYKDRHW 62
Query: 446 HEACFHCSRCRSSLVDKPFAAKEDQVLCTDCYSQEYSSRCQECRKAIMPGTRKMEYKGSS 625
HE CF C++C SLV+KPFAAK++++LCT+CYS E SS+C C++ IMPG+RKME+KG+
Sbjct: 63 HEGCFKCTKCNHSLVEKPFAAKDERLLCTECYSNECSSKCFHCKRTIMPGSRKMEFKGNY 122
Query: 626 WHETCFTCHRCQQPIGTKSFIPKDGQNFCVPCYEKQHALQCIQCKKPITSGGVTYREQPW 805
WHETCF C C+QPIGTK I K+ N+CVPC+EK+ A C CKK ITSGG+T+ +Q W
Sbjct: 123 WHETCFVCENCRQPIGTKPLISKESGNYCVPCFEKEFAHYCNFCKKVITSGGITFCDQLW 182
Query: 806 HRECFVCTACKKPLSGQRFTSRDEFAYCLGCFCDLYAKKCTGCANPIS 949
H+ECF+C+ C+K L ++F SRD++ +C+ C+ LYA KC C+ PIS
Sbjct: 183 HKECFLCSGCRKDLCEEQFMSRDDYPFCVDCYNHLYANKCVACSKPIS 230
Score = 132 bits (333), Expect = 5e-31
Identities = 56/169 (33%), Positives = 89/169 (52%), Gaps = 2/169 (1%)
Frame = +2
Query: 452 ACFHCSRCRSSLVDKPFAAKEDQVLCTDCYSQEYSSRCQECRKAIMPGTRKMEYKGSSWH 631
A F+C C +SL+ K + K+D C CY + +S+ C+EC+K I ++ + YK WH
Sbjct: 4 AHFYCQYCTASLLGKKYVLKDDSPYCVTCYDRVFSNYCEECKKPIESDSKDLCYKDRHWH 63
Query: 632 ETCFTCHRCQQPIGTKSFIPKDGQNFCVPCYEKQHALQCIQCKKPITSGG--VTYREQPW 805
E CF C +C + K F KD + C CY + + +C CK+ I G + ++ W
Sbjct: 64 EGCFKCTKCNHSLVEKPFAAKDERLLCTECYSNECSSKCFHCKRTIMPGSRKMEFKGNYW 123
Query: 806 HRECFVCTACKKPLSGQRFTSRDEFAYCLGCFCDLYAKKCTGCANPISA 952
H CFVC C++P+ + S++ YC+ CF +A C C I++
Sbjct: 124 HETCFVCENCRQPIGTKPLISKESGNYCVPCFEKEFAHYCNFCKKVITS 172
Score = 114 bits (285), Expect = 2e-25
Identities = 50/151 (33%), Positives = 81/151 (53%), Gaps = 2/151 (1%)
Frame = +2
Query: 275 FDCHHCENSLFGRKYVLREEQPYCVGCFEALFASTCEECGKLIGCDCKDLSYKDRHWHEA 454
F C +C + + + +E YCV CFE FA C C K+I +++ D+ WH+
Sbjct: 128 FVCENCRQPIGTKPLISKESGNYCVPCFEKEFAHYCNFCKKVITSG--GITFCDQLWHKE 185
Query: 455 CFHCSRCRSSLVDKPFAAKEDQVLCTDCYSQEYSSRCQECRKAI--MPGTRKMEYKGSSW 628
CF CS CR L ++ F +++D C DCY+ Y+++C C K I + G + + ++ S W
Sbjct: 186 CFLCSGCRKDLCEEQFMSRDDYPFCVDCYNHLYANKCVACSKPISGLTGAKFICFQDSQW 245
Query: 629 HETCFTCHRCQQPIGTKSFIPKDGQNFCVPC 721
H CF C +C + K F+ ++ + FC C
Sbjct: 246 HSECFNCGKCSVSLVGKGFLTQNKEIFCQKC 276
Score = 75.1 bits (183), Expect = 1e-13
Identities = 32/94 (34%), Positives = 49/94 (52%), Gaps = 2/94 (2%)
Frame = +2
Query: 269 ERFDCHHCENSLFGRKYVLREEQPYCVGCFEALFASTCEECGKLIG--CDCKDLSYKDRH 442
E F C C L +++ R++ P+CV C+ L+A+ C C K I K + ++D
Sbjct: 185 ECFLCSGCRKDLCEEQFMSRDDYPFCVDCYNHLYANKCVACSKPISGLTGAKFICFQDSQ 244
Query: 443 WHEACFHCSRCRSSLVDKPFAAKEDQVLCTDCYS 544
WH CF+C +C SLV K F + ++ C C S
Sbjct: 245 WHSECFNCGKCSVSLVGKGFLTQNKEIFCQKCGS 278
>ref|NP_065228.4| four and a half LIM domains protein 5 [Homo sapiens].
Length = 284
Score = 315 bits (807), Expect = 6e-86
Identities = 128/228 (56%), Positives = 172/228 (75%)
Frame = +2
Query: 266 TERFDCHHCENSLFGRKYVLREEQPYCVGCFEALFASTCEECGKLIGCDCKDLSYKDRHW 445
T F C +C SL G+KYVL+++ PYCV C++ +F++ CEEC K I D KDL YKDRHW
Sbjct: 3 TAHFYCQYCTASLLGKKYVLKDDSPYCVTCYDRVFSNYCEECKKPIESDSKDLCYKDRHW 62
Query: 446 HEACFHCSRCRSSLVDKPFAAKEDQVLCTDCYSQEYSSRCQECRKAIMPGTRKMEYKGSS 625
HE CF C++C SLV+KPFAAK++++LCT+CYS E SS+C C++ IMPG+RKME+KG+
Sbjct: 63 HEGCFKCTKCNHSLVEKPFAAKDERLLCTECYSNECSSKCFHCKRTIMPGSRKMEFKGNY 122
Query: 626 WHETCFTCHRCQQPIGTKSFIPKDGQNFCVPCYEKQHALQCIQCKKPITSGGVTYREQPW 805
WHETCF C C+QPIGTK I K+ N+CVPC+EK+ A C CKK ITSGG+T+ +Q W
Sbjct: 123 WHETCFVCENCRQPIGTKPLISKESGNYCVPCFEKEFAHYCNFCKKVITSGGITFCDQLW 182
Query: 806 HRECFVCTACKKPLSGQRFTSRDEFAYCLGCFCDLYAKKCTGCANPIS 949
H+ECF+C+ C+K L ++F SRD++ +C+ C+ LYA KC C+ PIS
Sbjct: 183 HKECFLCSGCRKDLCEEQFMSRDDYPFCVDCYNHLYANKCVACSKPIS 230
Score = 132 bits (333), Expect = 5e-31
Identities = 56/169 (33%), Positives = 89/169 (52%), Gaps = 2/169 (1%)
Frame = +2
Query: 452 ACFHCSRCRSSLVDKPFAAKEDQVLCTDCYSQEYSSRCQECRKAIMPGTRKMEYKGSSWH 631
A F+C C +SL+ K + K+D C CY + +S+ C+EC+K I ++ + YK WH
Sbjct: 4 AHFYCQYCTASLLGKKYVLKDDSPYCVTCYDRVFSNYCEECKKPIESDSKDLCYKDRHWH 63
Query: 632 ETCFTCHRCQQPIGTKSFIPKDGQNFCVPCYEKQHALQCIQCKKPITSGG--VTYREQPW 805
E CF C +C + K F KD + C CY + + +C CK+ I G + ++ W
Sbjct: 64 EGCFKCTKCNHSLVEKPFAAKDERLLCTECYSNECSSKCFHCKRTIMPGSRKMEFKGNYW 123
Query: 806 HRECFVCTACKKPLSGQRFTSRDEFAYCLGCFCDLYAKKCTGCANPISA 952
H CFVC C++P+ + S++ YC+ CF +A C C I++
Sbjct: 124 HETCFVCENCRQPIGTKPLISKESGNYCVPCFEKEFAHYCNFCKKVITS 172
Score = 114 bits (285), Expect = 2e-25
Identities = 50/151 (33%), Positives = 81/151 (53%), Gaps = 2/151 (1%)
Frame = +2
Query: 275 FDCHHCENSLFGRKYVLREEQPYCVGCFEALFASTCEECGKLIGCDCKDLSYKDRHWHEA 454
F C +C + + + +E YCV CFE FA C C K+I +++ D+ WH+
Sbjct: 128 FVCENCRQPIGTKPLISKESGNYCVPCFEKEFAHYCNFCKKVITSG--GITFCDQLWHKE 185
Query: 455 CFHCSRCRSSLVDKPFAAKEDQVLCTDCYSQEYSSRCQECRKAI--MPGTRKMEYKGSSW 628
CF CS CR L ++ F +++D C DCY+ Y+++C C K I + G + + ++ S W
Sbjct: 186 CFLCSGCRKDLCEEQFMSRDDYPFCVDCYNHLYANKCVACSKPISGLTGAKFICFQDSQW 245
Query: 629 HETCFTCHRCQQPIGTKSFIPKDGQNFCVPC 721
H CF C +C + K F+ ++ + FC C
Sbjct: 246 HSECFNCGKCSVSLVGKGFLTQNKEIFCQKC 276
Score = 75.1 bits (183), Expect = 1e-13
Identities = 32/94 (34%), Positives = 49/94 (52%), Gaps = 2/94 (2%)
Frame = +2
Query: 269 ERFDCHHCENSLFGRKYVLREEQPYCVGCFEALFASTCEECGKLIG--CDCKDLSYKDRH 442
E F C C L +++ R++ P+CV C+ L+A+ C C K I K + ++D
Sbjct: 185 ECFLCSGCRKDLCEEQFMSRDDYPFCVDCYNHLYANKCVACSKPISGLTGAKFICFQDSQ 244
Query: 443 WHEACFHCSRCRSSLVDKPFAAKEDQVLCTDCYS 544
WH CF+C +C SLV K F + ++ C C S
Sbjct: 245 WHSECFNCGKCSVSLVGKGFLTQNKEIFCQKCGS 278
>ref|NP_004459.2| four and a half LIM domains protein 3 isoform 1 [Homo sapiens].
Length = 280
Score = 313 bits (803), Expect = 2e-85
Identities = 124/228 (54%), Positives = 168/228 (73%)
Frame = +2
Query: 263 MTERFDCHHCENSLFGRKYVLREEQPYCVGCFEALFASTCEECGKLIGCDCKDLSYKDRH 442
M+E FDC C SL+GRKY+ + PYCV C++ FA+TC EC +LIG D ++L Y+DRH
Sbjct: 1 MSESFDCAKCNESLYGRKYIQTDSGPYCVPCYDNTFANTCAECQQLIGHDSRELFYEDRH 60
Query: 443 WHEACFHCSRCRSSLVDKPFAAKEDQVLCTDCYSQEYSSRCQECRKAIMPGTRKMEYKGS 622
+HE CF C RC+ SL D+PF ++ ++LC DCY +SS+C C + +MPG+RK+EY G
Sbjct: 61 FHEGCFRCCRCQRSLADEPFTCQDSELLCNDCYCSAFSSQCSACGETVMPGSRKLEYGGQ 120
Query: 623 SWHETCFTCHRCQQPIGTKSFIPKDGQNFCVPCYEKQHALQCIQCKKPITSGGVTYREQP 802
+WHE CF C C+QP+G++SF+P G ++CVPCYE + A +C +C K +T GGVTYR+QP
Sbjct: 121 TWHEHCFLCSGCEQPLGSRSFVPDKGAHYCVPCYENKFAPRCARCSKTLTQGGVTYRDQP 180
Query: 803 WHRECFVCTACKKPLSGQRFTSRDEFAYCLGCFCDLYAKKCTGCANPI 946
WHREC VCT C+ PL+GQ+FTSRDE YC+ CF +L+A KC+ C PI
Sbjct: 181 WHRECLVCTGCQTPLAGQQFTSRDEDPYCVACFGELFAPKCSSCKRPI 228
Score = 117 bits (294), Expect = 2e-26
Identities = 48/166 (28%), Positives = 85/166 (51%), Gaps = 2/166 (1%)
Frame = +2
Query: 458 FHCSRCRSSLVDKPFAAKEDQVLCTDCYSQEYSSRCQECRKAIMPGTRKMEYKGSSWHET 637
F C++C SL + + + C CY +++ C EC++ I +R++ Y+ +HE
Sbjct: 5 FDCAKCNESLYGRKYIQTDSGPYCVPCYDNTFANTCAECQQLIGHDSRELFYEDRHFHEG 64
Query: 638 CFTCHRCQQPIGTKSFIPKDGQNFCVPCYEKQHALQCIQCKKPITSGG--VTYREQPWHR 811
CF C RCQ+ + + F +D + C CY + QC C + + G + Y Q WH
Sbjct: 65 CFRCCRCQRSLADEPFTCQDSELLCNDCYCSAFSSQCSACGETVMPGSRKLEYGGQTWHE 124
Query: 812 ECFVCTACKKPLSGQRFTSRDEFAYCLGCFCDLYAKKCTGCANPIS 949
CF+C+ C++PL + F YC+ C+ + +A +C C+ ++
Sbjct: 125 HCFLCSGCEQPLGSRSFVPDKGAHYCVPCYENKFAPRCARCSKTLT 170
Score = 89.7 bits (221), Expect = 5e-18
Identities = 40/88 (45%), Positives = 54/88 (61%), Gaps = 2/88 (2%)
Frame = +2
Query: 281 CHHCENSLFGRKYVLREEQPYCVGCFEALFASTCEECGK-LIGCDC-KDLSYKDRHWHEA 454
C C+ L G+++ R+E PYCV CF LFA C C + ++G K +S++DRHWH
Sbjct: 188 CTGCQTPLAGQQFTSRDEDPYCVACFGELFAPKCSSCKRPIVGLGGGKYVSFEDRHWHHN 247
Query: 455 CFHCSRCRSSLVDKPFAAKEDQVLCTDC 538
CF C+RC +SLV + F DQVLC C
Sbjct: 248 CFSCARCSTSLVGQGFVPDGDQVLCQGC 275
>ref|NP_001153176.1| four and a half LIM domains protein 1 isoform 2 [Homo sapiens].
Length = 280
Score = 276 bits (707), Expect = 2e-74
Identities = 112/231 (48%), Positives = 160/231 (69%)
Frame = +2
Query: 263 MTERFDCHHCENSLFGRKYVLREEQPYCVGCFEALFASTCEECGKLIGCDCKDLSYKDRH 442
M E+FDCH+C + L G+KYV ++ C+ CF+ A+TC EC K IG D K++ YK+R
Sbjct: 1 MAEKFDCHYCRDPLQGKKYVQKDGHHCCLKCFDKFCANTCVECRKPIGADSKEVHYKNRF 60
Query: 443 WHEACFHCSRCRSSLVDKPFAAKEDQVLCTDCYSQEYSSRCQECRKAIMPGTRKMEYKGS 622
WH+ CF C++C L ++ F AK++++LC C ++E S +C+ C KAI+ G + +EYKG+
Sbjct: 61 WHDTCFRCAKCLHPLANETFVAKDNKILCNKCTTREDSPKCKGCFKAIVAGDQNVEYKGT 120
Query: 623 SWHETCFTCHRCQQPIGTKSFIPKDGQNFCVPCYEKQHALQCIQCKKPITSGGVTYREQP 802
WH+ CFTC C+Q IGT SF PK +CV C+E + A C++C K ITSGG+TY++QP
Sbjct: 121 VWHKDCFTCSNCKQVIGTGSFFPKGEDFYCVTCHETKFAKHCVKCNKAITSGGITYQDQP 180
Query: 803 WHRECFVCTACKKPLSGQRFTSRDEFAYCLGCFCDLYAKKCTGCANPISAF 955
WH +CFVC C K L+GQRFT+ ++ YC+ C+ + AKKC GC NPI+ F
Sbjct: 181 WHADCFVCVTCSKKLAGQRFTAVEDQYYCVDCYKNFVAKKCAGCKNPITGF 231
Score = 138 bits (347), Expect = 1e-32
Identities = 67/213 (31%), Positives = 97/213 (45%), Gaps = 5/213 (2%)
Frame = +2
Query: 275 FDCHHCENSLFGRKYVLREEQPYCVGCFEALFASTCEECGKLIGCDCKDLSYKDRHWHEA 454
F C C + L +V ++ + C C + C+ C K I +++ YK WH+
Sbjct: 66 FRCAKCLHPLANETFVAKDNKILCNKCTTREDSPKCKGCFKAIVAGDQNVEYKGTVWHKD 125
Query: 455 CFHCSRCRSSLVDKPFAAKEDQVLCTDCYSQEYSSRCQECRKAIMPGTRKMEYKGSSWHE 634
CF CS C+ + F K + C C+ +++ C +C KAI G + Y+ WH
Sbjct: 126 CFTCSNCKQVIGTGSFFPKGEDFYCVTCHETKFAKHCVKCNKAITSGG--ITYQDQPWHA 183
Query: 635 TCFTCHRCQQPIGTKSFIPKDGQNFCVPCYEKQHALQCIQCKKPITSGG-----VTYREQ 799
CF C C + + + F + Q +CV CY+ A +C CK PIT G V Y Q
Sbjct: 184 DCFVCVTCSKKLAGQRFTAVEDQYYCVDCYKNFVAKKCAGCKNPITGFGKGSSVVAYEGQ 243
Query: 800 PWHRECFVCTACKKPLSGQRFTSRDEFAYCLGC 898
WH CF C C L+ +RF E YC C
Sbjct: 244 SWHDYCFHCKKCSVNLANKRFVFHQEQVYCPDC 276
Score = 111 bits (278), Expect = 1e-24
Identities = 52/155 (33%), Positives = 75/155 (48%), Gaps = 3/155 (1%)
Frame = +2
Query: 275 FDCHHCENSLFGRKYVLREEQPYCVGCFEALFASTCEECGKLIGCDCKDLSYKDRHWHEA 454
F C +C+ + + + E YCV C E FA C +C K I ++Y+D+ WH
Sbjct: 127 FTCSNCKQVIGTGSFFPKGEDFYCVTCHETKFAKHCVKCNKAITSG--GITYQDQPWHAD 184
Query: 455 CFHCSRCRSSLVDKPFAAKEDQVLCTDCYSQEYSSRCQECRKAIM---PGTRKMEYKGSS 625
CF C C L + F A EDQ C DCY + +C C+ I G+ + Y+G S
Sbjct: 185 CFVCVTCSKKLAGQRFTAVEDQYYCVDCYKNFVAKKCAGCKNPITGFGKGSSVVAYEGQS 244
Query: 626 WHETCFTCHRCQQPIGTKSFIPKDGQNFCVPCYEK 730
WH+ CF C +C + K F+ Q +C C +K
Sbjct: 245 WHDYCFHCKKCSVNLANKRFVFHQEQVYCPDCAKK 279
>ref|NP_001153172.1| four and a half LIM domains protein 1 isoform 2 [Homo sapiens].
Length = 280
Score = 276 bits (707), Expect = 2e-74
Identities = 112/231 (48%), Positives = 160/231 (69%)
Frame = +2
Query: 263 MTERFDCHHCENSLFGRKYVLREEQPYCVGCFEALFASTCEECGKLIGCDCKDLSYKDRH 442
M E+FDCH+C + L G+KYV ++ C+ CF+ A+TC EC K IG D K++ YK+R
Sbjct: 1 MAEKFDCHYCRDPLQGKKYVQKDGHHCCLKCFDKFCANTCVECRKPIGADSKEVHYKNRF 60
Query: 443 WHEACFHCSRCRSSLVDKPFAAKEDQVLCTDCYSQEYSSRCQECRKAIMPGTRKMEYKGS 622
WH+ CF C++C L ++ F AK++++LC C ++E S +C+ C KAI+ G + +EYKG+
Sbjct: 61 WHDTCFRCAKCLHPLANETFVAKDNKILCNKCTTREDSPKCKGCFKAIVAGDQNVEYKGT 120
Query: 623 SWHETCFTCHRCQQPIGTKSFIPKDGQNFCVPCYEKQHALQCIQCKKPITSGGVTYREQP 802
WH+ CFTC C+Q IGT SF PK +CV C+E + A C++C K ITSGG+TY++QP
Sbjct: 121 VWHKDCFTCSNCKQVIGTGSFFPKGEDFYCVTCHETKFAKHCVKCNKAITSGGITYQDQP 180
Query: 803 WHRECFVCTACKKPLSGQRFTSRDEFAYCLGCFCDLYAKKCTGCANPISAF 955
WH +CFVC C K L+GQRFT+ ++ YC+ C+ + AKKC GC NPI+ F
Sbjct: 181 WHADCFVCVTCSKKLAGQRFTAVEDQYYCVDCYKNFVAKKCAGCKNPITGF 231
Score = 138 bits (347), Expect = 1e-32
Identities = 67/213 (31%), Positives = 97/213 (45%), Gaps = 5/213 (2%)
Frame = +2
Query: 275 FDCHHCENSLFGRKYVLREEQPYCVGCFEALFASTCEECGKLIGCDCKDLSYKDRHWHEA 454
F C C + L +V ++ + C C + C+ C K I +++ YK WH+
Sbjct: 66 FRCAKCLHPLANETFVAKDNKILCNKCTTREDSPKCKGCFKAIVAGDQNVEYKGTVWHKD 125
Query: 455 CFHCSRCRSSLVDKPFAAKEDQVLCTDCYSQEYSSRCQECRKAIMPGTRKMEYKGSSWHE 634
CF CS C+ + F K + C C+ +++ C +C KAI G + Y+ WH
Sbjct: 126 CFTCSNCKQVIGTGSFFPKGEDFYCVTCHETKFAKHCVKCNKAITSGG--ITYQDQPWHA 183
Query: 635 TCFTCHRCQQPIGTKSFIPKDGQNFCVPCYEKQHALQCIQCKKPITSGG-----VTYREQ 799
CF C C + + + F + Q +CV CY+ A +C CK PIT G V Y Q
Sbjct: 184 DCFVCVTCSKKLAGQRFTAVEDQYYCVDCYKNFVAKKCAGCKNPITGFGKGSSVVAYEGQ 243
Query: 800 PWHRECFVCTACKKPLSGQRFTSRDEFAYCLGC 898
WH CF C C L+ +RF E YC C
Sbjct: 244 SWHDYCFHCKKCSVNLANKRFVFHQEQVYCPDC 276
Score = 111 bits (278), Expect = 1e-24
Identities = 52/155 (33%), Positives = 75/155 (48%), Gaps = 3/155 (1%)
Frame = +2
Query: 275 FDCHHCENSLFGRKYVLREEQPYCVGCFEALFASTCEECGKLIGCDCKDLSYKDRHWHEA 454
F C +C+ + + + E YCV C E FA C +C K I ++Y+D+ WH
Sbjct: 127 FTCSNCKQVIGTGSFFPKGEDFYCVTCHETKFAKHCVKCNKAITSG--GITYQDQPWHAD 184
Query: 455 CFHCSRCRSSLVDKPFAAKEDQVLCTDCYSQEYSSRCQECRKAIM---PGTRKMEYKGSS 625
CF C C L + F A EDQ C DCY + +C C+ I G+ + Y+G S
Sbjct: 185 CFVCVTCSKKLAGQRFTAVEDQYYCVDCYKNFVAKKCAGCKNPITGFGKGSSVVAYEGQS 244
Query: 626 WHETCFTCHRCQQPIGTKSFIPKDGQNFCVPCYEK 730
WH+ CF C +C + K F+ Q +C C +K
Sbjct: 245 WHDYCFHCKKCSVNLANKRFVFHQEQVYCPDCAKK 279
>ref|NP_001161291.1| four and a half LIM domains protein 1 isoform 2 [Homo sapiens].
Length = 280
Score = 276 bits (707), Expect = 2e-74
Identities = 112/231 (48%), Positives = 160/231 (69%)
Frame = +2
Query: 263 MTERFDCHHCENSLFGRKYVLREEQPYCVGCFEALFASTCEECGKLIGCDCKDLSYKDRH 442
M E+FDCH+C + L G+KYV ++ C+ CF+ A+TC EC K IG D K++ YK+R
Sbjct: 1 MAEKFDCHYCRDPLQGKKYVQKDGHHCCLKCFDKFCANTCVECRKPIGADSKEVHYKNRF 60
Query: 443 WHEACFHCSRCRSSLVDKPFAAKEDQVLCTDCYSQEYSSRCQECRKAIMPGTRKMEYKGS 622
WH+ CF C++C L ++ F AK++++LC C ++E S +C+ C KAI+ G + +EYKG+
Sbjct: 61 WHDTCFRCAKCLHPLANETFVAKDNKILCNKCTTREDSPKCKGCFKAIVAGDQNVEYKGT 120
Query: 623 SWHETCFTCHRCQQPIGTKSFIPKDGQNFCVPCYEKQHALQCIQCKKPITSGGVTYREQP 802
WH+ CFTC C+Q IGT SF PK +CV C+E + A C++C K ITSGG+TY++QP
Sbjct: 121 VWHKDCFTCSNCKQVIGTGSFFPKGEDFYCVTCHETKFAKHCVKCNKAITSGGITYQDQP 180
Query: 803 WHRECFVCTACKKPLSGQRFTSRDEFAYCLGCFCDLYAKKCTGCANPISAF 955
WH +CFVC C K L+GQRFT+ ++ YC+ C+ + AKKC GC NPI+ F
Sbjct: 181 WHADCFVCVTCSKKLAGQRFTAVEDQYYCVDCYKNFVAKKCAGCKNPITGF 231
Score = 138 bits (347), Expect = 1e-32
Identities = 67/213 (31%), Positives = 97/213 (45%), Gaps = 5/213 (2%)
Frame = +2
Query: 275 FDCHHCENSLFGRKYVLREEQPYCVGCFEALFASTCEECGKLIGCDCKDLSYKDRHWHEA 454
F C C + L +V ++ + C C + C+ C K I +++ YK WH+
Sbjct: 66 FRCAKCLHPLANETFVAKDNKILCNKCTTREDSPKCKGCFKAIVAGDQNVEYKGTVWHKD 125
Query: 455 CFHCSRCRSSLVDKPFAAKEDQVLCTDCYSQEYSSRCQECRKAIMPGTRKMEYKGSSWHE 634
CF CS C+ + F K + C C+ +++ C +C KAI G + Y+ WH
Sbjct: 126 CFTCSNCKQVIGTGSFFPKGEDFYCVTCHETKFAKHCVKCNKAITSGG--ITYQDQPWHA 183
Query: 635 TCFTCHRCQQPIGTKSFIPKDGQNFCVPCYEKQHALQCIQCKKPITSGG-----VTYREQ 799
CF C C + + + F + Q +CV CY+ A +C CK PIT G V Y Q
Sbjct: 184 DCFVCVTCSKKLAGQRFTAVEDQYYCVDCYKNFVAKKCAGCKNPITGFGKGSSVVAYEGQ 243
Query: 800 PWHRECFVCTACKKPLSGQRFTSRDEFAYCLGC 898
WH CF C C L+ +RF E YC C
Sbjct: 244 SWHDYCFHCKKCSVNLANKRFVFHQEQVYCPDC 276
Score = 111 bits (278), Expect = 1e-24
Identities = 52/155 (33%), Positives = 75/155 (48%), Gaps = 3/155 (1%)
Frame = +2
Query: 275 FDCHHCENSLFGRKYVLREEQPYCVGCFEALFASTCEECGKLIGCDCKDLSYKDRHWHEA 454
F C +C+ + + + E YCV C E FA C +C K I ++Y+D+ WH
Sbjct: 127 FTCSNCKQVIGTGSFFPKGEDFYCVTCHETKFAKHCVKCNKAITSG--GITYQDQPWHAD 184
Query: 455 CFHCSRCRSSLVDKPFAAKEDQVLCTDCYSQEYSSRCQECRKAIM---PGTRKMEYKGSS 625
CF C C L + F A EDQ C DCY + +C C+ I G+ + Y+G S
Sbjct: 185 CFVCVTCSKKLAGQRFTAVEDQYYCVDCYKNFVAKKCAGCKNPITGFGKGSSVVAYEGQS 244
Query: 626 WHETCFTCHRCQQPIGTKSFIPKDGQNFCVPCYEK 730
WH+ CF C +C + K F+ Q +C C +K
Sbjct: 245 WHDYCFHCKKCSVNLANKRFVFHQEQVYCPDCAKK 279
Database: RefSeq49_HP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,297,164
Number of sequences in database: 32,964
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 32964
Number of Hits to DB: 44,699,721
Number of extensions: 1215685
Number of successful extensions: 14781
Number of sequences better than 1.0e-05: 167
Number of HSP's gapped: 9348
Number of HSP's successfully gapped: 368
Length of query: 414
Length of database: 18,297,164
Length adjustment: 105
Effective length of query: 309
Effective length of database: 14,835,944
Effective search space: 4584306696
Effective search space used: 4584306696
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to Sscrofa10_2
BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-014700
(1244 letters)
Database: Sscrofa_10.2.fasta
4582 sequences; 2,808,509,378 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Sscrofa_Chr03 375 e-101
>Sscrofa_Chr03
|| Length = 144787322
Score = 375 bits (189), Expect = e-101
Identities = 189/189 (100%)
Strand = Plus / Minus
Query: 762 agcccatcaccagcgggggcgtcacgtaccgtgagcagccctggcacagggagtgcttcg 821
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 51612591 agcccatcaccagcgggggcgtcacgtaccgtgagcagccctggcacagggagtgcttcg 51612532
Query: 822 tgtgcaccgcctgcaagaagccactgtccggccagcgcttcacgtcccgtgacgagttcg 881
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 51612531 tgtgcaccgcctgcaagaagccactgtccggccagcgcttcacgtcccgtgacgagttcg 51612472
Query: 882 cctactgcctgggctgcttctgcgacctgtacgccaagaagtgtacaggctgcgccaacc 941
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 51612471 cctactgcctgggctgcttctgcgacctgtacgccaagaagtgtacaggctgcgccaacc 51612412
Query: 942 ccatcagtg 950
|||||||||
Sbjct: 51612411 ccatcagtg 51612403
Score = 349 bits (176), Expect = 2e-93
Identities = 176/176 (100%)
Strand = Plus / Minus
Query: 588 tgccaggcacccgcaagatggaatacaagggcagcagctggcacgagacctgcttcacct 647
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 51614944 tgccaggcacccgcaagatggaatacaagggcagcagctggcacgagacctgcttcacct 51614885
Query: 648 gccaccgctgccagcagcccattgggaccaagagcttcatccctaaggacggccagaact 707
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 51614884 gccaccgctgccagcagcccattgggaccaagagcttcatccctaaggacggccagaact 51614825
Query: 708 tctgtgtgccctgctatgagaagcagcacgccttgcagtgcattcagtgcaaaaag 763
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 51614824 tctgtgtgccctgctatgagaagcagcacgccttgcagtgcattcagtgcaaaaag 51614769
Score = 349 bits (176), Expect = 2e-93
Identities = 179/180 (99%)
Strand = Plus / Minus
Query: 240 ggtggcagaagtccagcaccaagatgactgagcgcttcgactgtcaccactgtgagaact 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 51627589 ggtggcagaagtccagcaccaagatgactgagcgcttcgactgtcaccactgtgagaact 51627530
Query: 300 ccctcttcggccggaagtatgtcctgcgggaggagcagccctactgcgtgggctgcttcg 359
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 51627529 ccctcttcggccggaagtatgtcctgcgggaggagcagccctactgcgtgggctgctttg 51627470
Query: 360 aggccctcttcgccagcacatgcgaggagtgtgggaagctgattggatgcgactgcaagg 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 51627469 aggccctcttcgccagcacatgcgaggagtgtgggaagctgattggatgcgactgcaagg 51627410
Score = 345 bits (174), Expect = 4e-92
Identities = 177/178 (99%)
Strand = Plus / Minus
Query: 417 aggacttatcctacaaggaccggcactggcacgaggcctgcttccactgctcacgatgca 476
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 51617331 aggacttatcctacaaggaccggcactggcacgaggcctgcttccactgctcgcgatgca 51617272
Query: 477 ggagctccctcgtggacaagccatttgctgccaaggaggaccaggtgctctgcactgact 536
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 51617271 ggagctccctcgtggacaagccatttgctgccaaggaggaccaggtgctctgcactgact 51617212
Query: 537 gctactcgcaggagtactcatcccgctgccaggagtgcaggaaggccatcatgccagg 594
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 51617211 gctactcgcaggagtactcatcccgctgccaggagtgcaggaaggccatcatgccagg 51617154
Score = 321 bits (162), Expect = 5e-85
Identities = 257/284 (90%), Gaps = 9/284 (3%)
Strand = Plus / Minus
Query: 963 atgcagtatgatacaatgatcggctatgcagcagaaaaatctggttgaactcaagtccca 1022
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 51609104 atgcagtatgatacaatgatcggctatgcagcagaaaaatctggttgaactcaagtccca 51609045
Query: 1023 cctacgcagagcatctgtgaagccggtttcnttatctgagtgctggtcactgtgagaaat 1082
|||||||||||||||||||||||| ||||| | ||||||||||||||||||||||||| |
Sbjct: 51609044 cctacgcagagcatctgtgaagccagtttcttaatctgagtgctggtcactgtgagaagt 51608985
Query: 1083 gcttgattgtggctgaaacgggcctctggctgtatggtctgttttgcctgga-gctttgc 1141
||||||||||||||||||||||||||||||||||||||||| ||| ||||| |||||||
Sbjct: 51608984 gcttgattgtggctgaaacgggcctctggctgtatggtctg--ttggctggaggctttgc 51608927
Query: 1142 tcnnnnnnnnntaccaccacccccctcca-cttgntagttgctttgctgggctct--att 1198
|| ||||||||||||||||| |||| ||||||||||||| |||||| ||
Sbjct: 51608926 tcaaaaaaaataaccaccacccccctccaccttgttagttgctttgct-ggctcttactt 51608868
Query: 1199 natgatataaaggt-aatgcattcttgc-aatgtgctttttaaa 1240
||||||||||||| ||||||||||||| |||||||||||||||
Sbjct: 51608867 tatgatataaaggtaaatgcattcttgcaaatgtgctttttaaa 51608824
Score = 281 bits (142), Expect = 4e-73
Identities = 155/158 (98%), Gaps = 1/158 (0%)
Strand = Plus / Minus
Query: 14 gtgggaggcgctctctc-atcttagttcggtcttcctccgtgggaggggacgaccggcct 72
||||||||||||||||| ||||||||||||||||||| || |||||||||||||||||||
Sbjct: 51640245 gtgggaggcgctctctccatcttagttcggtcttcctgcgcgggaggggacgaccggcct 51640186
Query: 73 ggggtgtgggggattggaccttccttgtccctccccaatggaacaaagacctggccttac 132
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 51640185 ggggtgtgggggattggaccttccttgtccctccccaatggaacaaagacctggccttac 51640126
Query: 133 ccatttttcctgccatcgccggctgactttgtgaccga 170
||||||||||||||||||||||||||||||||||||||
Sbjct: 51640125 ccatttttcctgccatcgccggctgactttgtgaccga 51640088
Database: Sscrofa_10.2.fasta
Posted date: Nov 16, 2011 10:34 AM
Number of letters in database: 2,808,509,378
Number of sequences in database: 4582
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4582
Number of Hits to DB: 30,246,621
Number of extensions: 186
Number of successful extensions: 186
Number of sequences better than 1.0e-05: 1
Number of HSP's gapped: 186
Number of HSP's successfully gapped: 7
Length of query: 1244
Length of database: 2,808,509,378
Length adjustment: 21
Effective length of query: 1223
Effective length of database: 2,808,413,156
Effective search space: 3434689289788
Effective search space used: 3434689289788
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 18 (36.2 bits)
S2: 30 (60.0 bits)