Search to RefSeqCP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-014830
(932 letters)
Database: RefSeq49_CP.fasta
33,336 sequences; 18,874,504 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_536376.2| PREDICTED: similar to Hexokinase, type I (HK I)... 427 e-120
Alignment gi|XP_532991.2| PREDICTED: similar to hexokinase 2 [Canis famil... 370 e-103
Alignment gi|XP_546137.2| PREDICTED: similar to hexokinase domain contain... 348 4e-96
Alignment gi|XP_546212.2| PREDICTED: similar to Hexokinase type III (HK I... 291 5e-79
>ref|XP_536376.2| PREDICTED: similar to Hexokinase, type I (HK I) (Brain form
hexokinase) [Canis familiaris].
Length = 1073
Score = 427 bits (1098), Expect = e-120
Identities = 213/221 (96%), Positives = 219/221 (99%)
Frame = +1
Query: 1 VEMLEGTEGRMCINMEWGAFGDNGCLDDIRTIYDKMVDEYSLNAGKQRYEKMISGMYLGE 180
VEMLEG +GRMCINMEWGAFGDNGCLDDIRTIYD++VDEYSLNAGKQR+EKMISGMYLGE
Sbjct: 849 VEMLEGNDGRMCINMEWGAFGDNGCLDDIRTIYDRLVDEYSLNAGKQRFEKMISGMYLGE 908
Query: 181 IVRNILIDFTKRGFLFRGQISEPLKTRGIFQTKYLSQIESDRLALLQVRAILQQLGLNST 360
IVRNILIDFTK+GFLFRGQISE LKTRGIFQTKYLSQIESDRLALLQVRAILQQLGLNST
Sbjct: 909 IVRNILIDFTKKGFLFRGQISETLKTRGIFQTKYLSQIESDRLALLQVRAILQQLGLNST 968
Query: 361 CDDSILVKTVCGVVSKRAAQLCGAGMAAVVDKIRENRGLDHLNVTVGVDGTLYKLHPHFS 540
CDDSILVKTVCGVVSKRAAQLCGAGMAAVVDKIRENRGLDHLNVTVGVDGTLYKLHPHFS
Sbjct: 969 CDDSILVKTVCGVVSKRAAQLCGAGMAAVVDKIRENRGLDHLNVTVGVDGTLYKLHPHFS 1028
Query: 541 RIMHQTVKELSPKCNVSFLLSEDGSGKGAALITAVGVRLRE 663
RIM+QTVKELSPKCNVSFLLSEDGSGKGAALITAVGVRLRE
Sbjct: 1029 RIMYQTVKELSPKCNVSFLLSEDGSGKGAALITAVGVRLRE 1069
Score = 233 bits (594), Expect = 2e-61
Identities = 114/221 (51%), Positives = 157/221 (71%)
Frame = +1
Query: 1 VEMLEGTEGRMCINMEWGAFGDNGCLDDIRTIYDKMVDEYSLNAGKQRYEKMISGMYLGE 180
++++EG EGRMCIN EWGAFGD+G L+DIRT +D+ +D SLN GKQ +EKM+SGMYLGE
Sbjct: 401 IDLVEGDEGRMCINTEWGAFGDDGSLEDIRTEFDREIDRGSLNPGKQLFEKMVSGMYLGE 460
Query: 181 IVRNILIDFTKRGFLFRGQISEPLKTRGIFQTKYLSQIESDRLALLQVRAILQQLGLNST 360
+VR IL+ K LF G+I+ L TRG +T +S IE ++ L + IL +LG+ +
Sbjct: 461 LVRLILVKMAKESLLFEGRITPELLTRGKLKTSDVSAIEKNKEGLHNAKEILTRLGVEPS 520
Query: 361 CDDSILVKTVCGVVSKRAAQLCGAGMAAVVDKIRENRGLDHLNVTVGVDGTLYKLHPHFS 540
DD I V+ VC +VS R+A L A + A+++++R+N+G L TVGVDG+LYK HP ++
Sbjct: 521 DDDCISVQHVCTIVSFRSANLVAATLGAILNRLRDNKGTPRLRTTVGVDGSLYKTHPQYA 580
Query: 541 RIMHQTVKELSPKCNVSFLLSEDGSGKGAALITAVGVRLRE 663
R H+T++ L P +V FLLSE GSGKGAA++TAV RL E
Sbjct: 581 RRFHKTLRRLVPDSDVRFLLSESGSGKGAAMVTAVAYRLAE 621
>ref|XP_532991.2| PREDICTED: similar to hexokinase 2 [Canis familiaris].
Length = 909
Score = 370 bits (951), Expect = e-103
Identities = 184/221 (83%), Positives = 202/221 (91%)
Frame = +1
Query: 1 VEMLEGTEGRMCINMEWGAFGDNGCLDDIRTIYDKMVDEYSLNAGKQRYEKMISGMYLGE 180
VE++EG EGRMC+NMEWGAFGDNGCLDDIRT +D VDE SLN GKQR+EKMISGMYLGE
Sbjct: 685 VELVEGEEGRMCVNMEWGAFGDNGCLDDIRTEFDVAVDELSLNPGKQRFEKMISGMYLGE 744
Query: 181 IVRNILIDFTKRGFLFRGQISEPLKTRGIFQTKYLSQIESDRLALLQVRAILQQLGLNST 360
IVRNILIDFTKRG LFRG+ISE LKTRGIF+TK+LSQIESD LALLQVRAIL LGL ST
Sbjct: 745 IVRNILIDFTKRGLLFRGRISERLKTRGIFETKFLSQIESDCLALLQVRAILHHLGLEST 804
Query: 361 CDDSILVKTVCGVVSKRAAQLCGAGMAAVVDKIRENRGLDHLNVTVGVDGTLYKLHPHFS 540
CDDSI+VK VC VV++RAAQLCGAGMAAVVDKIRENRGLD L VTVGVDGTLYKLHPHF+
Sbjct: 805 CDDSIIVKEVCTVVARRAAQLCGAGMAAVVDKIRENRGLDTLKVTVGVDGTLYKLHPHFA 864
Query: 541 RIMHQTVKELSPKCNVSFLLSEDGSGKGAALITAVGVRLRE 663
+IMH+TVK+L+PKC+VSFL SEDGSGKGAALITAV R+RE
Sbjct: 865 KIMHETVKDLAPKCDVSFLESEDGSGKGAALITAVACRIRE 905
Score = 245 bits (625), Expect = 5e-65
Identities = 117/221 (52%), Positives = 162/221 (73%)
Frame = +1
Query: 1 VEMLEGTEGRMCINMEWGAFGDNGCLDDIRTIYDKMVDEYSLNAGKQRYEKMISGMYLGE 180
++M+EG EGRMCINMEWGAFGD+G LDD RT +D+ +D SLN GKQ +EKMISGMY+GE
Sbjct: 237 IDMVEGDEGRMCINMEWGAFGDDGILDDFRTEFDQEIDMGSLNPGKQLFEKMISGMYMGE 296
Query: 181 IVRNILIDFTKRGFLFRGQISEPLKTRGIFQTKYLSQIESDRLALLQVRAILQQLGLNST 360
+VR IL+ K LF G++S L G F+TK +S IE ++ + + R +L +LG++ T
Sbjct: 297 LVRLILVKMAKEELLFGGKLSPGLLATGQFETKDVSDIEGEKDGIRKAREVLVRLGIDPT 356
Query: 361 CDDSILVKTVCGVVSKRAAQLCGAGMAAVVDKIRENRGLDHLNVTVGVDGTLYKLHPHFS 540
+D + VC +VS R+A LC A +AAV+ +I+EN+G + L T+GVDG++YK HPHF+
Sbjct: 357 QEDCVATHRVCQIVSTRSASLCAATLAAVLRRIKENKGEERLRSTIGVDGSVYKKHPHFA 416
Query: 541 RIMHQTVKELSPKCNVSFLLSEDGSGKGAALITAVGVRLRE 663
+ +H+TV+ L P C+V FL SEDGSGKGAA++TAV RL +
Sbjct: 417 KRLHKTVRRLVPDCDVRFLRSEDGSGKGAAMVTAVAYRLAD 457
>ref|XP_546137.2| PREDICTED: similar to hexokinase domain containing 1 [Canis
familiaris].
Length = 917
Score = 348 bits (893), Expect = 4e-96
Identities = 169/221 (76%), Positives = 200/221 (90%)
Frame = +1
Query: 1 VEMLEGTEGRMCINMEWGAFGDNGCLDDIRTIYDKMVDEYSLNAGKQRYEKMISGMYLGE 180
+E++EG EG+MCIN EWG FGDNGC+DDIRT YD+ VDE SLN GKQRYEKM SGMYLGE
Sbjct: 692 IELVEGDEGKMCINTEWGGFGDNGCIDDIRTQYDEKVDEGSLNPGKQRYEKMTSGMYLGE 751
Query: 181 IVRNILIDFTKRGFLFRGQISEPLKTRGIFQTKYLSQIESDRLALLQVRAILQQLGLNST 360
IVR ILID TK+G LFRGQISE L+TRGIF+TK+LSQIESDRLALLQVR+ILQQLGL+ST
Sbjct: 752 IVRQILIDLTKQGLLFRGQISERLRTRGIFETKFLSQIESDRLALLQVRSILQQLGLDST 811
Query: 361 CDDSILVKTVCGVVSKRAAQLCGAGMAAVVDKIRENRGLDHLNVTVGVDGTLYKLHPHFS 540
C+DSI+VK VCG VS+RAAQL GAG+AAVV+K RE++GL++L +TVGVDGTLYKLHPHFS
Sbjct: 812 CEDSIVVKEVCGAVSRRAAQLYGAGLAAVVEKKREDQGLEYLKITVGVDGTLYKLHPHFS 871
Query: 541 RIMHQTVKELSPKCNVSFLLSEDGSGKGAALITAVGVRLRE 663
RI+ +TVKEL+P+C+V+ +LSEDGSGKGAALITAV RL++
Sbjct: 872 RILQETVKELAPRCDVTLMLSEDGSGKGAALITAVAKRLQQ 912
Score = 233 bits (593), Expect = 3e-61
Identities = 113/220 (51%), Positives = 158/220 (71%)
Frame = +1
Query: 1 VEMLEGTEGRMCINMEWGAFGDNGCLDDIRTIYDKMVDEYSLNAGKQRYEKMISGMYLGE 180
++++EG EGRMCIN EWGAFGD+G L+DIRT +D+ +D SLN GKQ +EKMISG+YLGE
Sbjct: 245 IDLVEGDEGRMCINTEWGAFGDDGTLEDIRTEFDRELDLGSLNPGKQLFEKMISGLYLGE 304
Query: 181 IVRNILIDFTKRGFLFRGQISEPLKTRGIFQTKYLSQIESDRLALLQVRAILQQLGLNST 360
+VR IL+ K G LF G+ S L T+G +T++++ +E + L R IL LGL +
Sbjct: 305 LVRIILLKMAKAGLLFGGKKSSALHTKGKIETRHVAAMEKYKEGLANTREILTDLGLEPS 364
Query: 361 CDDSILVKTVCGVVSKRAAQLCGAGMAAVVDKIRENRGLDHLNVTVGVDGTLYKLHPHFS 540
D I V+ VC +VS R+A LC A +AA++ ++REN+ L+ L TVG+DGTLYK+HP +
Sbjct: 365 EADCIAVQHVCTIVSFRSANLCAAALAAILTRLRENKKLERLRTTVGMDGTLYKIHPQYP 424
Query: 541 RIMHQTVKELSPKCNVSFLLSEDGSGKGAALITAVGVRLR 660
+ +H+ V+ L P C+V FLLSE GS KGAA++TAV R++
Sbjct: 425 KRLHKVVRRLVPNCDVRFLLSESGSTKGAAMVTAVASRVQ 464
>ref|XP_546212.2| PREDICTED: similar to Hexokinase type III (HK III) [Canis
familiaris].
Length =
Animal-Genome cDNA 20110601C-014830
Animal-Genome cDNA 20110601C-014830
Search to RefSeqBP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-014830
(932 letters)
Database: RefSeq49_BP.fasta
33,088 sequences; 17,681,374 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001012686.1| hexokinase 1 [Bos taurus]. 423 e-118
Alignment gi|NP_776744.1| hexokinase-1 [Bos taurus]. 402 e-112
Alignment gi|XP_002691235.1| PREDICTED: hexokinase 2 [Bos taurus]. 369 e-102
Alignment gi|XP_870563.2| PREDICTED: hexokinase 2-like [Bos taurus]. 369 e-102
Alignment gi|NP_001178413.1| putative hexokinase HKDC1 [Bos taurus]. 350 1e-96
Alignment gi|XP_002698911.1| PREDICTED: hexokinase domain containing 1 [B... 350 1e-96
Alignment gi|NP_001095399.1| hexokinase 3 [Bos taurus]. 271 5e-73
Alignment gi|XP_001255832.2| PREDICTED: hexokinase 2 [Bos taurus]. 249 3e-66
Alignment gi|NP_001095772.1| glucokinase [Bos taurus]. 233 1e-61
>ref|NP_001012686.1| hexokinase 1 [Bos taurus].
Length = 917
Score = 423 bits (1087), Expect = e-118
Identities = 210/221 (95%), Positives = 217/221 (98%)
Frame = +1
Query: 1 VEMLEGTEGRMCINMEWGAFGDNGCLDDIRTIYDKMVDEYSLNAGKQRYEKMISGMYLGE 180
VE LEG +G+MCINMEWGAFGDNGCLDDIRTIYDK+VDE+SLN+GKQRYEKMISGMYLGE
Sbjct: 693 VETLEGNQGQMCINMEWGAFGDNGCLDDIRTIYDKLVDEFSLNSGKQRYEKMISGMYLGE 752
Query: 181 IVRNILIDFTKRGFLFRGQISEPLKTRGIFQTKYLSQIESDRLALLQVRAILQQLGLNST 360
IVRNILIDF KRGFLFRGQISEPLKTRG+FQTKYLSQIESDRLALLQVRAILQQLGLNST
Sbjct: 753 IVRNILIDFAKRGFLFRGQISEPLKTRGLFQTKYLSQIESDRLALLQVRAILQQLGLNST 812
Query: 361 CDDSILVKTVCGVVSKRAAQLCGAGMAAVVDKIRENRGLDHLNVTVGVDGTLYKLHPHFS 540
CDDSILVKTVCGVVSKRAAQLCGAGMAAVVDKIRENRGLD LNVTVGVDGTLYKLHPHFS
Sbjct: 813 CDDSILVKTVCGVVSKRAAQLCGAGMAAVVDKIRENRGLDRLNVTVGVDGTLYKLHPHFS 872
Query: 541 RIMHQTVKELSPKCNVSFLLSEDGSGKGAALITAVGVRLRE 663
RIMHQTVKELSPKCNVSFLLSEDGSGKGAALITAVGVRLR+
Sbjct: 873 RIMHQTVKELSPKCNVSFLLSEDGSGKGAALITAVGVRLRQ 913
Score = 242 bits (617), Expect = 4e-64
Identities = 116/221 (52%), Positives = 158/221 (71%)
Frame = +1
Query: 1 VEMLEGTEGRMCINMEWGAFGDNGCLDDIRTIYDKMVDEYSLNAGKQRYEKMISGMYLGE 180
++++EG EGRMC+N EWGAFGD+G L+DIRT +D+ +D SLN GKQ +EKM+SGMYLGE
Sbjct: 245 IDLVEGDEGRMCVNTEWGAFGDDGALEDIRTEFDREIDRGSLNPGKQLFEKMVSGMYLGE 304
Query: 181 IVRNILIDFTKRGFLFRGQISEPLKTRGIFQTKYLSQIESDRLALLQVRAILQQLGLNST 360
+VR IL+ K G LF G+I+ L TRG 957
Score = 291 bits (746), Expect = 5e-79
Identities = 145/221 (65%), Positives = 180/221 (81%)
Frame = +1
Query: 1 VEMLEGTEGRMCINMEWGAFGDNGCLDDIRTIYDKMVDEYSLNAGKQRYEKMISGMYLGE 180
V + G G+MCINMEWGAFGD+G L +RT +D VD+ S+N GKQ +EKMISGMYLGE
Sbjct: 729 VAAVAGDSGQMCINMEWGAFGDDGSLGLLRTCFDASVDQASINPGKQSFEKMISGMYLGE 788
Query: 181 IVRNILIDFTKRGFLFRGQISEPLKTRGIFQTKYLSQIESDRLALLQVRAILQQLGLNST 360
IVR+IL+ T G LFRGQ ++ L+TR IF+TK+LS+IESD LAL QVRAIL+ LGL+ T
Sbjct: 789 IVRHILLHLTSLGVLFRGQQTQRLQTRDIFKTKFLSEIESDSLALRQVRAILEDLGLSLT 848
Query: 361 CDDSILVKTVCGVVSKRAAQLCGAGMAAVVDKIRENRGLDHLNVTVGVDGTLYKLHPHFS 540
DD+++V VC VS+RAAQLCGAG+AAVV+KIRENRGL+ L V++GVDGTLYKLHPHFS
Sbjct: 849 SDDALMVLEVCQAVSQRAAQLCGAGVAAVVEKIRENRGLEELTVSIGVDGTLYKLHPHFS 908
Query: 541 RIMHQTVKELSPKCNVSFLLSEDGSGKGAALITAVGVRLRE 663
++ TV+EL+P+C V+FL SEDGSGKGAAL+TAV RL +
Sbjct: 909 SLVAATVRELAPRCVVTFLQSEDGSGKGAALVTAVACRLAQ 949
Score = 192 bits (488), Expect = 4e-49
Identities = 95/219 (43%), Positives = 142/219 (64%)
Frame = +1
Query: 1 VEMLEGTEGRMCINMEWGAFGDNGCLDDIRTIYDKMVDEYSLNAGKQRYEKMISGMYLGE 180
V +L+ GR+C+++EWG+FGD+G L + TI+D +D SLN G QR+EKMI G+YLGE
Sbjct: 287 VAVLDEDRGRVCVSVEWGSFGDDGVLGPMLTIFDHALDRESLNPGAQRFEKMIGGLYLGE 346
Query: 181 IVRNILIDFTKRGFLFRGQISEPLKTRGIFQTKYLSQIESDRLALLQVRAILQQLGLNST 360
+VR +L+ +RG LF G S L +RG ++++++E +V A+LQ LGLN
Sbjct: 347 LVRLVLVHLAQRGVLFGGCTSPALLSRGSILLEHVAEMEDPWAGAARVHALLQDLGLNVG 406
Query: 361 CDDSILVKTVCGVVSKRAAQLCGAGMAAVVDKIRENRGLDHLNVTVGVDGTLYKLHPHFS 540
D LV+ VC V RAA+LC A +AAV+ +++ +R L + V G +++ HP F
Sbjct: 407 ASDVELVQYVCAAVFTRAARLCAAALAAVLSRLQHSREQQILQIAVATGGRVFEQHPSFL 466
Query: 541 RIMHQTVKELSPKCNVSFLLSEDGSGKGAALITAVGVRL 657
I+ +TV L+P+C+VSF+ S DG G+G A++TAV RL
Sbjct: 467 SILQETVMLLTPECDVSFIPSVDGGGRGVAMVTAVAARL 505
Database: RefSeq49_CP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,874,504
Number of sequences in database: 33,336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33336
Number of Hits to DB: 37,763,776
Number of extensions: 1065788
Number of successful extensions: 4144
Number of sequences better than 1.0e-05: 4
Number of HSP's gapped: 4126
Number of HSP's successfully gapped: 8
Length of query: 310
Length of database: 18,874,504
Length adjustment: 103
Effective length of query: 207
Effective length of database: 15,440,896
Effective search space: 3196265472
Effective search space used: 3196265472
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)
F T +S IE ++ L + IL +LG+ +
Sbjct: 305 LVRLILVKMAKEGLLFEGRITPELLTRGKFNTSDVSAIEKNKEGLHNAKEILTRLGVEPS 364
Query: 361 CDDSILVKTVCGVVSKRAAQLCGAGMAAVVDKIRENRGLDHLNVTVGVDGTLYKLHPHFS 540
DD + V+ VC +VS R+A L A + A++ ++R+N+G L TVGVDG+LYK HP +S
Sbjct: 365 DDDCVAVQHVCTIVSFRSANLVAATLGAILSRLRDNKGTPRLRTTVGVDGSLYKTHPQYS 424
Query: 541 RIMHQTVKELSPKCNVSFLLSEDGSGKGAALITAVGVRLRE 663
R H+T++ L P C+V FLLSE GSGKGAA++TAV RL E
Sbjct: 425 RRFHKTLRRLVPDCDVRFLLSESGSGKGAAMVTAVAYRLAE 465
>ref|NP_776744.1| hexokinase-1 [Bos taurus].
Length = 918
Score = 402 bits (1033), Expect = e-112
Identities = 200/220 (90%), Positives = 212/220 (96%)
Frame = +1
Query: 1 VEMLEGTEGRMCINMEWGAFGDNGCLDDIRTIYDKMVDEYSLNAGKQRYEKMISGMYLGE 180
VEM+EG + +MCINMEWGAFGDNGC DDIRT +DK+VDEYSLN+G QR+E MISG+YLGE
Sbjct: 693 VEMVEGNQRQMCINMEWGAFGDNGCSDDIRTDFDKVVDEYSLNSGNQRFENMISGIYLGE 752
Query: 181 IVRNILIDFTKRGFLFRGQISEPLKTRGIFQTKYLSQIESDRLALLQVRAILQQLGLNST 360
IVRNILIDFTK+GFLFRGQISEPLKTRGIF+TK+LSQIESDRLALLQVRAILQQLGLNST
Sbjct: 753 IVRNILIDFTKKGFLFRGQISEPLKTRGIFETKFLSQIESDRLALLQVRAILQQLGLNST 812
Query: 361 CDDSILVKTVCGVVSKRAAQLCGAGMAAVVDKIRENRGLDHLNVTVGVDGTLYKLHPHFS 540
CDDSILVKTVCGVVSKRAAQLCGAGMAAVV+KIRENRGLD LNVTVGVDGTLYKLHP FS
Sbjct: 813 CDDSILVKTVCGVVSKRAAQLCGAGMAAVVEKIRENRGLDRLNVTVGVDGTLYKLHPQFS 872
Query: 541 RIMHQTVKELSPKCNVSFLLSEDGSGKGAALITAVGVRLR 660
RIMHQTVKELSPKCNVSFLLSEDGSGKGAALITAVGVRLR
Sbjct: 873 RIMHQTVKELSPKCNVSFLLSEDGSGKGAALITAVGVRLR 912
Score = 211 bits (537), Expect = 7e-55
Identities = 104/216 (48%), Positives = 145/216 (67%)
Frame = +1
Query: 16 GTEGRMCINMEWGAFGDNGCLDDIRTIYDKMVDEYSLNAGKQRYEKMISGMYLGEIVRNI 195
G +GRMCIN EWG GD+G L+DIR +D+ SLN GKQR+EKM+SG Y+ ++VR +
Sbjct: 250 GDDGRMCINTEWGDLGDDGSLEDIRKEFDREFRRGSLNPGKQRFEKMVSGRYMEDVVRLV 309
Query: 196 LIDFTKRGFLFRGQISEPLKTRGIFQTKYLSQIESDRLALLQVRAILQQLGLNSTCDDSI 375
L+ K G LF G+I+ L TRG F T +S IE D+ L + IL +LG+ + DD +
Sbjct: 310 LVKMAKEGLLFEGRITPELLTRGKFNTSDVSAIEKDKEGLHNAKEILTRLGVERSDDDCV 369
Query: 376 LVKTVCGVVSKRAAQLCGAGMAAVVDKIRENRGLDHLNVTVGVDGTLYKLHPHFSRIMHQ 555
V+ VC +VS R+A L A + A+++++R+N+ L TV VDG+LYK HP +SR H+
Sbjct: 370 SVQHVCTIVSFRSANLVAATLGAILNRLRDNKSTPRLRTTVRVDGSLYKTHPQYSRRFHK 429
Query: 556 TVKELSPKCNVSFLLSEDGSGKGAALITAVGVRLRE 663
T++ L P +V FLLSE G+GKGAA++TAV RL E
Sbjct: 430 TLRRLVPDSDVRFLLSESGTGKGAAMVTAVAYRLAE 465
>ref|XP_002691235.1| PREDICTED: hexokinase 2 [Bos taurus].
Length = 917
Score = 369 bits (946), Expect = e-102
Identities = 181/221 (81%), Positives = 202/221 (91%)
Frame = +1
Query: 1 VEMLEGTEGRMCINMEWGAFGDNGCLDDIRTIYDKMVDEYSLNAGKQRYEKMISGMYLGE 180
VE++EG EGRMC+NMEWGAFGDNGCLDD+RT +D VDE SLN G+QR+EKMISGMYLGE
Sbjct: 693 VELVEGEEGRMCVNMEWGAFGDNGCLDDLRTEFDAAVDELSLNPGRQRFEKMISGMYLGE 752
Query: 181 IVRNILIDFTKRGFLFRGQISEPLKTRGIFQTKYLSQIESDRLALLQVRAILQQLGLNST 360
IVRNILIDFTKRG LFRG+ISE LKTRGIF+TK+LSQIESD LALLQVRAIL LGL ST
Sbjct: 753 IVRNILIDFTKRGLLFRGRISERLKTRGIFETKFLSQIESDCLALLQVRAILHHLGLEST 812
Query: 361 CDDSILVKTVCGVVSKRAAQLCGAGMAAVVDKIRENRGLDHLNVTVGVDGTLYKLHPHFS 540
CDDSI+VK VC VV++RAAQLCGAGMAAVVDKIRENRGLD L VTVGVDGTLYKLHPHF+
Sbjct: 813 CDDSIIVKEVCTVVARRAAQLCGAGMAAVVDKIRENRGLDTLKVTVGVDGTLYKLHPHFA 872
Query: 541 RIMHQTVKELSPKCNVSFLLSEDGSGKGAALITAVGVRLRE 663
++MH+TVK+L+PKC+VSFL SEDGSGKGAALITAV R+RE
Sbjct: 873 KVMHETVKDLAPKCDVSFLESEDGSGKGAALITAVACRIRE 913
Score = 249 bits (635), Expect = 3e-66
Identities = 121/221 (54%), Positives = 163/221 (73%)
Frame = +1
Query: 1 VEMLEGTEGRMCINMEWGAFGDNGCLDDIRTIYDKMVDEYSLNAGKQRYEKMISGMYLGE 180
++ +EG EGRMCINMEWGAFGD+G LDDIRT +D+ +D SLN GKQ +EKMISGMY+GE
Sbjct: 245 IDTVEGDEGRMCINMEWGAFGDDGALDDIRTEFDQEIDMGSLNPGKQLFEKMISGMYMGE 304
Query: 181 IVRNILIDFTKRGFLFRGQISEPLKTRGIFQTKYLSQIESDRLALLQVRAILQQLGLNST 360
+VR IL+ K LF G++S L G F+TK +S IE ++ + + R IL +LGL+ T
Sbjct: 305 LVRLILVKMAKEELLFGGKLSPELLATGHFETKDVSDIEGEKDGIQKAREILVRLGLDPT 364
Query: 361 CDDSILVKTVCGVVSKRAAQLCGAGMAAVVDKIRENRGLDHLNVTVGVDGTLYKLHPHFS 540
+D + VC +VS R+A LC A +AAV+ +I+EN+G+D L TVGVDG++YK HPHF+
Sbjct: 365 HEDCVATHRVCQIVSTRSASLCAATLAAVLWRIKENKGVDRLRSTVGVDGSVYKKHPHFA 424
Query: 541 RIMHQTVKELSPKCNVSFLLSEDGSGKGAALITAVGVRLRE 663
+ +H+TV+ L P C+V FL SEDGSGKGAA++TAV RL +
Sbjct: 425 KRLHKTVRRLVPDCDVRFLRSEDGSGKGAAMVTAVAYRLAD 465
>ref|XP_870563.2| PREDICTED: hexokinase 2-like [Bos taurus].
Length = 584
Score = 369 bits (946), Expect = e-102
Identities = 181/221 (81%), Positives = 202/221 (91%)
Frame = +1
Query: 1 VEMLEGTEGRMCINMEWGAFGDNGCLDDIRTIYDKMVDEYSLNAGKQRYEKMISGMYLGE 180
VE++EG EGRMC+NMEWGAFGDNGCLDD+RT +D VDE SLN G+QR+EKMISGMYLGE
Sbjct: 360 VELVEGEEGRMCVNMEWGAFGDNGCLDDLRTEFDAAVDELSLNPGRQRFEKMISGMYLGE 419
Query: 181 IVRNILIDFTKRGFLFRGQISEPLKTRGIFQTKYLSQIESDRLALLQVRAILQQLGLNST 360
IVRNILIDFTKRG LFRG+ISE LKTRGIF+TK+LSQIESD LALLQVRAIL LGL ST
Sbjct: 420 IVRNILIDFTKRGLLFRGRISERLKTRGIFETKFLSQIESDCLALLQVRAILHHLGLEST 479
Query: 361 CDDSILVKTVCGVVSKRAAQLCGAGMAAVVDKIRENRGLDHLNVTVGVDGTLYKLHPHFS 540
CDDSI+VK VC VV++RAAQLCGAGMAAVVDKIRENRGLD L VTVGVDGTLYKLHPHF+
Sbjct: 480 CDDSIIVKEVCTVVARRAAQLCGAGMAAVVDKIRENRGLDTLKVTVGVDGTLYKLHPHFA 539
Query: 541 RIMHQTVKELSPKCNVSFLLSEDGSGKGAALITAVGVRLRE 663
++MH+TVK+L+PKC+VSFL SEDGSGKGAALITAV R+RE
Sbjct: 540 KVMHETVKDLAPKCDVSFLESEDGSGKGAALITAVACRIRE 580
Score = 131 bits (330), Expect = 7e-31
Identities = 63/124 (50%), Positives = 90/124 (72%)
Frame = +1
Query: 292 IESDRLALLQVRAILQQLGLNSTCDDSILVKTVCGVVSKRAAQLCGAGMAAVVDKIRENR 471
I ++ + + R IL +LGL+ T +D + VC +VS R+A LC A +AAV+ +I+EN+
Sbjct: 9 IPREKDGIQKAREILVRLGLDPTHEDCVATHRVCQIVSTRSASLCAATLAAVLWRIKENK 68
Query: 472 GLDHLNVTVGVDGTLYKLHPHFSRIMHQTVKELSPKCNVSFLLSEDGSGKGAALITAVGV 651
G+D L TVGVDG++YK HPHF++ +H+TV+ L P C+V FL SEDGSGKGAA++TAV
Sbjct: 69 GVDRLRSTVGVDGSVYKKHPHFAKRLHKTVRRLVPDCDVRFLRSEDGSGKGAAMVTAVAY 128
Query: 652 RLRE 663
RL +
Sbjct: 129 RLAD 132
>ref|NP_001178413.1| putative hexokinase HKDC1 [Bos taurus].
Length = 917
Score = 350 bits (897), Expect = 1e-96
Identities = 170/221 (76%), Positives = 198/221 (89%)
Frame = +1
Query: 1 VEMLEGTEGRMCINMEWGAFGDNGCLDDIRTIYDKMVDEYSLNAGKQRYEKMISGMYLGE 180
+E++EG EG+MCIN EWG FGDNGCLDDI T YDK VDE SLN GKQRYEKM SGMYLGE
Sbjct: 692 IELVEGDEGKMCINTEWGGFGDNGCLDDIHTQYDKEVDEGSLNPGKQRYEKMTSGMYLGE 751
Query: 181 IVRNILIDFTKRGFLFRGQISEPLKTRGIFQTKYLSQIESDRLALLQVRAILQQLGLNST 360
IVR ILID TK+G LFRGQISE L+TRGIF+TK+LSQIESDRLALLQVR ILQQLGL+ST
Sbjct: 752 IVRQILIDLTKQGLLFRGQISERLRTRGIFETKFLSQIESDRLALLQVRRILQQLGLDST 811
Query: 361 CDDSILVKTVCGVVSKRAAQLCGAGMAAVVDKIRENRGLDHLNVTVGVDGTLYKLHPHFS 540
C+DSI+VK VCG VS+RAAQL GAG+AA+V+K RE++GL+H+ +TVGVDGTLYKLHPHFS
Sbjct: 812 CEDSIVVKEVCGAVSRRAAQLYGAGLAAIVEKRREDQGLEHMRITVGVDGTLYKLHPHFS 871
Query: 541 RIMHQTVKELSPKCNVSFLLSEDGSGKGAALITAVGVRLRE 663
RI+ +TVKEL+P+C+V F+LSEDGSGKGAALITAV RL++
Sbjct: 872 RILRETVKELAPQCDVMFMLSEDGSGKGAALITAVAKRLQQ 912
Score = 231 bits (590), Expect = 5e-61
Identities = 113/220 (51%), Positives = 157/220 (71%)
Frame = +1
Query: 1 VEMLEGTEGRMCINMEWGAFGDNGCLDDIRTIYDKMVDEYSLNAGKQRYEKMISGMYLGE 180
++++EG EGRMC+N EWGAFGD+G L+DIRT +D+ +D SLN GKQ +EKMISG+YLGE
Sbjct: 245 IDLVEGDEGRMCVNTEWGAFGDDGALEDIRTEFDRELDLGSLNPGKQLFEKMISGLYLGE 304
Query: 181 IVRNILIDFTKRGFLFRGQISEPLKTRGIFQTKYLSQIESDRLALLQVRAILQQLGLNST 360
+VR IL+ K G LF G+ S L +G +T++++ +E + L R IL LGL +
Sbjct: 305 LVRLILLKMAKAGLLFGGEKSSALHIKGKIETRHVAAMERYKEGLANTREILTDLGLEPS 364
Query: 361 CDDSILVKTVCGVVSKRAAQLCGAGMAAVVDKIRENRGLDHLNVTVGVDGTLYKLHPHFS 540
D I V+ VC +VS R+A LC A +AA++ ++REN+ L L TVGVDGTLYK+HP +
Sbjct: 365 DADCIAVQHVCTIVSFRSANLCAAALAAILTRLRENKKLVRLRTTVGVDGTLYKIHPQYP 424
Query: 541 RIMHQTVKELSPKCNVSFLLSEDGSGKGAALITAVGVRLR 660
+ +H+ V++L P C+V FLLSE GS KGAA++TAV RL+
Sbjct: 425 KRLHKVVRKLVPNCDVRFLLSESGSTKGAAMVTAVASRLQ 464
>ref|XP_002698911.1| PREDICTED: hexokinase domain containing 1 [Bos taurus].
Length = 917
Score = 350 bits (897), Expect = 1e-96
Identities = 170/221 (76%), Positives = 198/221 (89%)
Frame = +1
Query: 1 VEMLEGTEGRMCINMEWGAFGDNGCLDDIRTIYDKMVDEYSLNAGKQRYEKMISGMYLGE 180
+E++EG EG+MCIN EWG FGDNGCLDDI T YDK VDE SLN GKQRYEKM SGMYLGE
Sbjct: 692 IELVEGDEGKMCINTEWGGFGDNGCLDDIHTQYDKEVDEGSLNPGKQRYEKMTSGMYLGE 751
Query: 181 IVRNILIDFTKRGFLFRGQISEPLKTRGIFQTKYLSQIESDRLALLQVRAILQQLGLNST 360
IVR ILID TK+G LFRGQISE L+TRGIF+TK+LSQIESDRLALLQVR ILQQLGL+ST
Sbjct: 752 IVRQILIDLTKQGLLFRGQISERLRTRGIFETKFLSQIESDRLALLQVRRILQQLGLDST 811
Query: 361 CDDSILVKTVCGVVSKRAAQLCGAGMAAVVDKIRENRGLDHLNVTVGVDGTLYKLHPHFS 540
C+DSI+VK VCG VS+RAAQL GAG+AA+V+K RE++GL+H+ +TVGVDGTLYKLHPHFS
Sbjct: 812 CEDSIVVKEVCGAVSRRAAQLYGAGLAAIVEKRREDQGLEHMRITVGVDGTLYKLHPHFS 871
Query: 541 RIMHQTVKELSPKCNVSFLLSEDGSGKGAALITAVGVRLRE 663
RI+ +TVKEL+P+C+V F+LSEDGSGKGAALITAV RL++
Sbjct: 872 RILRETVKELAPQCDVMFMLSEDGSGKGAALITAVAKRLQQ 912
Score = 231 bits (590), Expect = 5e-61
Identities = 113/220 (51%), Positives = 157/220 (71%)
Frame = +1
Query: 1 VEMLEGTEGRMCINMEWGAFGDNGCLDDIRTIYDKMVDEYSLNAGKQRYEKMISGMYLGE 180
++++EG EGRMC+N EWGAFGD+G L+DIRT +D+ +D SLN GKQ +EKMISG+YLGE
Sbjct: 245 IDLVEGDEGRMCVNTEWGAFGDDGALEDIRTEFDRELDLGSLNPGKQLFEKMISGLYLGE 304
Query: 181 IVRNILIDFTKRGFLFRGQISEPLKTRGIFQTKYLSQIESDRLALLQVRAILQQLGLNST 360
+VR IL+ K G LF G+ S L +G +T++++ +E + L R IL LGL +
Sbjct: 305 LVRLILLKMAKAGLLFGGEKSSALHIKGKIETRHVAAMERYKEGLANTREILTDLGLEPS 364
Query: 361 CDDSILVKTVCGVVSKRAAQLCGAGMAAVVDKIRENRGLDHLNVTVGVDGTLYKLHPHFS 540
D I V+ VC +VS R+A LC A +AA++ ++REN+ L L TVGVDGTLYK+HP +
Sbjct: 365 DADCIAVQHVCTIVSFRSANLCAAALAAILTRLRENKKLVRLRTTVGVDGTLYKIHPQYP 424
Query: 541 RIMHQTVKELSPKCNVSFLLSEDGSGKGAALITAVGVRLR 660
+ +H+ V++L P C+V FLLSE GS KGAA++TAV RL+
Sbjct: 425 KRLHKVVRKLVPNCDVRFLLSESGSTKGAAMVTAVASRLQ 464
>ref|NP_001095399.1| hexokinase 3 [Bos taurus].
Length = 304
Score = 271 bits (694), Expect = 5e-73
Identities = 139/216 (64%), Positives = 172/216 (79%)
Frame = +1
Query: 16 GTEGRMCINMEWGAFGDNGCLDDIRTIYDKMVDEYSLNAGKQRYEKMISGMYLGEIVRNI 195
GTE + +E GAFGD+G L + T +D VD+ S+N GKQR+EKMISGMYLGEIVR+I
Sbjct: 85 GTEKGDFVVLELGAFGDDGSLSMLSTRFDASVDQASINPGKQRFEKMISGMYLGEIVRHI 144
Query: 196 LIDFTKRGFLFRGQISEPLKTRGIFQTKYLSQIESDRLALLQVRAILQQLGLNSTCDDSI 375
L+ T G LFRGQ + L+TR IF+TK+LS+IESD LAL QVRAIL+ LGL T DD++
Sbjct: 145 LLHLTSLGVLFRGQQTRRLQTRDIFKTKFLSEIESDSLALRQVRAILEDLGLPLTSDDAL 204
Query: 376 LVKTVCGVVSKRAAQLCGAGMAAVVDKIRENRGLDHLNVTVGVDGTLYKLHPHFSRIMHQ 555
+V VC VS+RAAQLCGAG+AAVV+KIRENRGL+ L ++VGVDGTLYKLHPHFS ++
Sbjct: 205 MVLEVCQAVSQRAAQLCGAGVAAVVEKIRENRGLEELTISVGVDGTLYKLHPHFSSLVAA 264
Query: 556 TVKELSPKCNVSFLLSEDGSGKGAALITAVGVRLRE 663
TV+EL+P+C V+FL SEDGSGKGAAL+TAV RL +
Sbjct: 265 TVRELAPRCVVTFLQSEDGSGKGAALVTAVACRLAQ 300
>ref|XP_001255832.2| PREDICTED: hexokinase 2 [Bos taurus].
Length = 824
Score = 249 bits (635), Expect = 3e-66
Identities = 121/221 (54%), Positives = 163/221 (73%)
Frame = +1
Query: 1 VEMLEGTEGRMCINMEWGAFGDNGCLDDIRTIYDKMVDEYSLNAGKQRYEKMISGMYLGE 180
++ +EG EGRMCINMEWGAFGD+G LDDIRT +D+ +D SLN GKQ +EKMISGMY+GE
Sbjct: 245 IDTVEGDEGRMCINMEWGAFGDDGALDDIRTEFDQEIDMGSLNPGKQLFEKMISGMYMGE 304
Query: 181 IVRNILIDFTKRGFLFRGQISEPLKTRGIFQTKYLSQIESDRLALLQVRAILQQLGLNST 360
+VR IL+ K LF G++S L G F+TK +S IE ++ + + R IL +LGL+ T
Sbjct: 305 LVRLILVKMAKEELLFGGKLSPELLATGHFETKDVSDIEGEKDGIQKAREILVRLGLDPT 364
Query: 361 CDDSILVKTVCGVVSKRAAQLCGAGMAAVVDKIRENRGLDHLNVTVGVDGTLYKLHPHFS 540
+D + VC +VS R+A LC A +AAV+ +I+EN+G+D L TVGVDG++YK HPHF+
Sbjct: 365 HEDCVATHRVCQIVSTRSASLCAATLAAVLWRIKENKGVDRLRSTVGVDGSVYKKHPHFA 424
Query: 541 RIMHQTVKELSPKCNVSFLLSEDGSGKGAALITAVGVRLRE 663
+ +H+TV+ L P C+V FL SEDGSGKGAA++TAV RL +
Sbjct: 425 KRLHKTVRRLVPDCDVRFLRSEDGSGKGAAMVTAVAYRLAD 465
Score = 172 bits (437), Expect = 3e-43
Identities = 84/110 (76%), Positives = 97/110 (88%), Gaps = 1/110 (0%)
Frame = +1
Query: 1 VEMLEGTEGRMCINMEWGAFGDNGCLDDIRTIYDKMVDEYSLNAGKQRYEKMISGMYLGE 180
VE++EG EGRMC+NMEWGAFGDNGCLDD+RT +D VDE SLN G+QR+EKMISGMYLGE
Sbjct: 693 VELVEGEEGRMCVNMEWGAFGDNGCLDDLRTEFDAAVDELSLNPGRQRFEKMISGMYLGE 752
Query: 181 IVRNILIDFTKRGFLFRGQISEPLKTRGIFQTKYLSQIE-SDRLALLQVR 327
IVRNILIDFTKRG LFRG+ISE LKTRGIF+TK+LSQIE + ++ LL R
Sbjct: 753 IVRNILIDFTKRGLLFRGRISERLKTRGIFETKFLSQIERAGKIHLLMKR 802
>ref|NP_001095772.1| glucokinase [Bos taurus].
Length = 465
Score = 233 bits (595), Expect = 1e-61
Identities = 110/218 (50%), Positives = 154/218 (70%)
Frame = +1
Query: 1 VEMLEGTEGRMCINMEWGAFGDNGCLDDIRTIYDKMVDEYSLNAGKQRYEKMISGMYLGE 180
VE++EG EGRMC+N EWGAFGD+G LD+ YD++VDE SLN G+Q YEK+I G Y+GE
Sbjct: 241 VELVEGDEGRMCVNTEWGAFGDSGELDEFLLEYDRVVDENSLNPGQQLYEKLIGGKYMGE 300
Query: 181 IVRNILIDFTKRGFLFRGQISEPLKTRGIFQTKYLSQIESDRLALLQVRAILQQLGLNST 360
+VR +L+ LF G+ SE L+TRG F+T+++SQ+ESD Q+ IL LGL +
Sbjct: 301 LVRLVLLKLVDENLLFHGEASEQLRTRGAFETRFVSQVESDSGDRKQIYNILSTLGLRPS 360
Query: 361 CDDSILVKTVCGVVSKRAAQLCGAGMAAVVDKIRENRGLDHLNVTVGVDGTLYKLHPHFS 540
D +V+ C VS RAA +C AG+A V++++RE+R D + +TVGVDG++YKLHP F
Sbjct: 361 ATDCDIVRRACESVSTRAAHMCAAGLAGVINRMRESRSEDVMRITVGVDGSVYKLHPSFK 420
Query: 541 RIMHQTVKELSPKCNVSFLLSEDGSGKGAALITAVGVR 654
H V+ L+P C ++F+ SE+GSG+GAALI+AV +
Sbjct: 421 ERFHAIVRRLTPSCEITFIESEEGSGRGAALISAVACK 458
Database: RefSeq49_BP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 17,681,374
Number of sequences in database: 33,088
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33088
Number of Hits to DB: 36,251,638
Number of extensions: 1042424
Number of successful extensions: 4114
Number of sequences better than 1.0e-05: 9
Number of HSP's gapped: 4095
Number of HSP's successfully gapped: 16
Length of query: 310
Length of database: 17,681,374
Length adjustment: 102
Effective length of query: 208
Effective length of database: 14,306,398
Effective search space: 2975730784
Effective search space used: 2975730784
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)
Search to RefSeqSP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-014830
(932 letters)
Database: RefSeq49_SP.fasta
24,897 sequences; 11,343,932 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001230113.1| hexokinase 1 [Sus scrofa]. 440 e-124
Alignment gi|NP_001116459.1| hexokinase-2 [Sus scrofa]. 369 e-102
Alignment gi|XP_001928917.1| PREDICTED: putative hexokinase HKDC1 [Sus sc... 353 6e-98
Alignment gi|XP_003123703.1| PREDICTED: hexokinase-3 [Sus scrofa]. 294 4e-80
Alignment gi|XP_003134931.1| PREDICTED: glucokinase isoform 1 [Sus scrofa]. 234 7e-62
>ref|NP_001230113.1| hexokinase 1 [Sus scrofa].
Length = 916
Score = 440 bits (1132), Expect = e-124
Identities = 221/222 (99%), Positives = 221/222 (99%)
Frame = +1
Query: 1 VEMLEGTEGRMCINMEWGAFGDNGCLDDIRTIYDKMVDEYSLNAGKQRYEKMISGMYLGE 180
VEMLEGTEGRMCINMEWGAFGDNGCLDDIRTIYDKMVDEYSLNAGKQRYEKMISGMYLG
Sbjct: 693 VEMLEGTEGRMCINMEWGAFGDNGCLDDIRTIYDKMVDEYSLNAGKQRYEKMISGMYLGV 752
Query: 181 IVRNILIDFTKRGFLFRGQISEPLKTRGIFQTKYLSQIESDRLALLQVRAILQQLGLNST 360
IVRNILIDFTKRGFLFRGQISEPLKTRGIFQTKYLSQIESDRLALLQVRAILQQLGLNST
Sbjct: 753 IVRNILIDFTKRGFLFRGQISEPLKTRGIFQTKYLSQIESDRLALLQVRAILQQLGLNST 812
Query: 361 CDDSILVKTVCGVVSKRAAQLCGAGMAAVVDKIRENRGLDHLNVTVGVDGTLYKLHPHFS 540
CDDSILVKTVCGVVSKRAAQLCGAGMAAVVDKIRENRGLDHLNVTVGVDGTLYKLHPHFS
Sbjct: 813 CDDSILVKTVCGVVSKRAAQLCGAGMAAVVDKIRENRGLDHLNVTVGVDGTLYKLHPHFS 872
Query: 541 RIMHQTVKELSPKCNVSFLLSEDGSGKGAALITAVGVRLREG 666
RIMHQTVKELSPKCNVSFLLSEDGSGKGAALITAVGVRLREG
Sbjct: 873 RIMHQTVKELSPKCNVSFLLSEDGSGKGAALITAVGVRLREG 914
Score = 239 bits (611), Expect = 1e-63
Identities = 116/221 (52%), Positives = 158/221 (71%)
Frame = +1
Query: 1 VEMLEGTEGRMCINMEWGAFGDNGCLDDIRTIYDKMVDEYSLNAGKQRYEKMISGMYLGE 180
++++EG EGRMCIN EWGAFGD+G L+DIRT +D+ +D SLN GKQ +EKM+SGMY+GE
Sbjct: 245 IDLVEGDEGRMCINTEWGAFGDDGALEDIRTEFDREIDRGSLNPGKQLFEKMVSGMYMGE 304
Query: 181 IVRNILIDFTKRGFLFRGQISEPLKTRGIFQTKYLSQIESDRLALLQVRAILQQLGLNST 360
+VR IL+ K G LF G+I+ L TRG F T +S IE ++ L + IL +LG+ +
Sbjct: 305 LVRLILVKMAKEGLLFEGRITPELLTRGKFNTSDVSAIEKNKEGLHNAKEILTRLGVEPS 364
Query: 361 CDDSILVKTVCGVVSKRAAQLCGAGMAAVVDKIRENRGLDHLNVTVGVDGTLYKLHPHFS 540
DD I V+ VC +VS R+A L A + A+++++R+N+ L TVGVDG+LYK HP +S
Sbjct: 365 DDDCISVQHVCTIVSFRSANLVAATLGAILNRLRDNKSTPRLRTTVGVDGSLYKTHPQYS 424
Query: 541 RIMHQTVKELSPKCNVSFLLSEDGSGKGAALITAVGVRLRE 663
R H+T++ L P C+V FLLSE GSGKGAA++TAV RL E
Sbjct: 425 RRFHKTLRRLVPDCDVRFLLSESGSGKGAAMVTAVAYRLAE 465
>ref|NP_001116459.1| hexokinase-2 [Sus scrofa].
Length = 917
Score = 369 bits (946), Expect = e-102
Identities = 183/221 (82%), Positives = 201/221 (90%)
Frame = +1
Query: 1 VEMLEGTEGRMCINMEWGAFGDNGCLDDIRTIYDKMVDEYSLNAGKQRYEKMISGMYLGE 180
VE++EG EGRMC+NMEWGAFGDNGCLDD RT +D VDE SLNAGKQR+EKMISGMYLGE
Sbjct: 693 VELVEGEEGRMCVNMEWGAFGDNGCLDDFRTEFDAAVDELSLNAGKQRFEKMISGMYLGE 752
Query: 181 IVRNILIDFTKRGFLFRGQISEPLKTRGIFQTKYLSQIESDRLALLQVRAILQQLGLNST 360
IVRNILIDFTKRG LFRG+ISE LKTRGIF+TK+LSQIESD LALLQVRAIL LGL ST
Sbjct: 753 IVRNILIDFTKRGLLFRGRISERLKTRGIFETKFLSQIESDCLALLQVRAILHHLGLEST 812
Query: 361 CDDSILVKTVCGVVSKRAAQLCGAGMAAVVDKIRENRGLDHLNVTVGVDGTLYKLHPHFS 540
C DSI+VK VC VV++RAAQLCGAGMAAVVDKIRENRGLD L VTVGVDGTLYKLHPHF+
Sbjct: 813 CGDSIIVKEVCTVVARRAAQLCGAGMAAVVDKIRENRGLDTLKVTVGVDGTLYKLHPHFA 872
Query: 541 RIMHQTVKELSPKCNVSFLLSEDGSGKGAALITAVGVRLRE 663
+IMH+TVK+L+PKC+VSFL SEDGSGKGAALITAV R+RE
Sbjct: 873 KIMHETVKDLAPKCDVSFLESEDGSGKGAALITAVACRIRE 913
Score = 245 bits (626), Expect = 2e-65
Identities = 116/221 (52%), Positives = 163/221 (73%)
Frame = +1
Query: 1 VEMLEGTEGRMCINMEWGAFGDNGCLDDIRTIYDKMVDEYSLNAGKQRYEKMISGMYLGE 180
++M+EG EGRMCINMEWGAFGD+G LDDIRT +D+ +D SLN GKQ +EKMISG+Y+GE
Sbjct: 245 IDMVEGDEGRMCINMEWGAFGDDGALDDIRTEFDQEIDMGSLNPGKQLFEKMISGLYMGE 304
Query: 181 IVRNILIDFTKRGFLFRGQISEPLKTRGIFQTKYLSQIESDRLALLQVRAILQQLGLNST 360
+VR IL+ K LF G++S L G F+TK +S IE ++ + + R +L +LGL+ T
Sbjct: 305 LVRLILVKMAKEELLFGGKLSPELLATGHFETKDVSDIEGEKDGIRKAREVLVRLGLDPT 364
Query: 361 CDDSILVKTVCGVVSKRAAQLCGAGMAAVVDKIRENRGLDHLNVTVGVDGTLYKLHPHFS 540
+D + VC +VS R+A LC A +AAV+ +I+EN+G + L T+GVDG++YK HPHF+
Sbjct: 365 QEDCVATHRVCQIVSTRSASLCAATLAAVLRRIKENKGEERLRSTIGVDGSVYKKHPHFA 424
Query: 541 RIMHQTVKELSPKCNVSFLLSEDGSGKGAALITAVGVRLRE 663
+ +H+T++ L P C++ FL SEDGSGKGAA++TAV RL +
Sbjct: 425 KRLHKTLRRLVPDCDIRFLRSEDGSGKGAAMVTAVAYRLAD 465
>ref|XP_001928917.1| PREDICTED: putative hexokinase HKDC1 [Sus scrofa].
Length = 917
Score = 353 bits (907), Expect = 6e-98
Identities = 172/221 (77%), Positives = 199/221 (90%)
Frame = +1
Query: 1 VEMLEGTEGRMCINMEWGAFGDNGCLDDIRTIYDKMVDEYSLNAGKQRYEKMISGMYLGE 180
+E++EG EG+MCIN EWG FGDNGCLDDIRT YDK VDE SLN GKQRYEKM SGMYLGE
Sbjct: 692 IELVEGNEGKMCINTEWGGFGDNGCLDDIRTQYDKEVDEGSLNPGKQRYEKMTSGMYLGE 751
Query: 181 IVRNILIDFTKRGFLFRGQISEPLKTRGIFQTKYLSQIESDRLALLQVRAILQQLGLNST 360
IVR ILID TK+G LFRGQISE L+TRGIF+TK+LSQIESDRLALLQVR ILQQLGL+ST
Sbjct: 752 IVRQILIDLTKQGLLFRGQISERLRTRGIFETKFLSQIESDRLALLQVRGILQQLGLDST 811
Query: 361 CDDSILVKTVCGVVSKRAAQLCGAGMAAVVDKIRENRGLDHLNVTVGVDGTLYKLHPHFS 540
C+DSI+VK VCG VS+RAAQL GAG+AA+V+K RE++GL+HL +TVGVDGTLYKLHPHFS
Sbjct: 812 CEDSIVVKEVCGAVSRRAAQLYGAGLAAIVEKKREDQGLEHLKITVGVDGTLYKLHPHFS 871
Query: 541 RIMHQTVKELSPKCNVSFLLSEDGSGKGAALITAVGVRLRE 663
RI+ +TVKEL+P+C+V F+LSEDGSGKGAALITAV RL++
Sbjct: 872 RILQETVKELAPRCDVMFMLSEDGSGKGAALITAVAKRLQQ 912
Score = 230 bits (586), Expect = 1e-60
Identities = 112/220 (50%), Positives = 157/220 (71%)
Frame = +1
Query: 1 VEMLEGTEGRMCINMEWGAFGDNGCLDDIRTIYDKMVDEYSLNAGKQRYEKMISGMYLGE 180
++++EG EGRMCIN EWGAFGD+G L+DIRT +D+ +D SLN GKQ +EKMISG+YLGE
Sbjct: 245 IDLVEGDEGRMCINTEWGAFGDDGALEDIRTEFDRELDLGSLNPGKQLFEKMISGLYLGE 304
Query: 181 IVRNILIDFTKRGFLFRGQISEPLKTRGIFQTKYLSQIESDRLALLQVRAILQQLGLNST 360
+VR IL+ K G LF G+ S L +G +T++++ +E + L R IL LGL +
Sbjct: 305 LVRLILLKMAKTGLLFGGEKSSALHIKGKIETRHVAAMERYKEGLANTREILTDLGLEPS 364
Query: 361 CDDSILVKTVCGVVSKRAAQLCGAGMAAVVDKIRENRGLDHLNVTVGVDGTLYKLHPHFS 540
D I V+ VC +VS R+A LC A +AA++ ++REN+ L L TVG+DGTLYK+HP +
Sbjct: 365 EADCIAVQHVCTIVSFRSANLCAAALAAILTRLRENKKLVRLRTTVGMDGTLYKIHPQYP 424
Query: 541 RIMHQTVKELSPKCNVSFLLSEDGSGKGAALITAVGVRLR 660
+ +H+ V++L P C+V FLLSE GS KGAA++TAV R++
Sbjct: 425 KRLHKVVRKLVPNCDVRFLLSESGSAKGAAMVTAVASRVQ 464
>ref|XP_003123703.1| PREDICTED: hexokinase-3 [Sus scrofa].
Length = 921
Score = 294 bits (753), Expect = 4e-80
Identities = 147/221 (66%), Positives = 180/221 (81%)
Frame = +1
Query: 1 VEMLEGTEGRMCINMEWGAFGDNGCLDDIRTIYDKMVDEYSLNAGKQRYEKMISGMYLGE 180
V + G G MCINMEWGAFGD+G L + T +D+ VD+ S+N G+QR+EKMISGMYLGE
Sbjct: 697 VASVPGDSGHMCINMEWGAFGDDGSLGMLSTYFDERVDQASINPGRQRFEKMISGMYLGE 756
Query: 181 IVRNILIDFTKRGFLFRGQISEPLKTRGIFQTKYLSQIESDRLALLQVRAILQQLGLNST 360
IVR+IL+ T RG LFRGQ + L+TR IF+TK+LSQIESD LAL QVRAIL+ LGL T
Sbjct: 757 IVRHILLHLTSRGVLFRGQQIQCLQTRDIFKTKFLSQIESDSLALRQVRAILEDLGLPLT 816
Query: 361 CDDSILVKTVCGVVSKRAAQLCGAGMAAVVDKIRENRGLDHLNVTVGVDGTLYKLHPHFS 540
DD+++V VC VS+RAAQLCGAG+AAVV+KIRENRGL+ L V+VGVDGTLYKLHPHFS
Sbjct: 817 SDDALMVLEVCQAVSRRAAQLCGAGVAAVVEKIRENRGLEKLTVSVGVDGTLYKLHPHFS 876
Query: 541 RIMHQTVKELSPKCNVSFLLSEDGSGKGAALITAVGVRLRE 663
R++ +TV+EL+P C V+FL S+DGSGKGAAL+TAV RL +
Sbjct: 877 RLVEETVQELAPCCEVTFLQSKDGSGKGAALVTAVACRLAQ 917
Score = 182 bits (461), Expect = 3e-46
Identities = 93/219 (42%), Positives = 139/219 (63%)
Frame = +1
Query: 1 VEMLEGTEGRMCINMEWGAFGDNGCLDDIRTIYDKMVDEYSLNAGKQRYEKMISGMYLGE 180
V +L GR+CI++EWG+F D+ L + TI+D+ +D+ SLN G QR+EKMI G+YLGE
Sbjct: 258 VAVLGEDRGRVCISVEWGSFSDDEALGPVWTIFDRTLDQESLNPGAQRFEKMIGGLYLGE 317
Query: 181 IVRNILIDFTKRGFLFRGQISEPLKTRGIFQTKYLSQIESDRLALLQVRAILQQLGLNST 360
+VR L D +RG LF G S L + G ++++++E+ +V A+L GLN
Sbjct: 318 LVRLALADLAQRGVLFGGSTSPVLLSPGSILLEHVAEMENPSGGTARVHALL---GLNPR 374
Query: 361 CDDSILVKTVCGVVSKRAAQLCGAGMAAVVDKIRENRGLDHLNVTVGVDGTLYKLHPHFS 540
D+ LV+ VC VS RAAQLC A +AA++ +++ R L + V G +++ HP F
Sbjct: 375 TSDAELVQQVCAAVSTRAAQLCAAALAAILSRLQHIREQQKLQIAVATGGRVFEQHPRFL 434
Query: 541 RIMHQTVKELSPKCNVSFLLSEDGSGKGAALITAVGVRL 657
I+ +TV L+P+C+VSF+ S DG G+G A++TAV RL
Sbjct: 435 AILQETVMLLAPECDVSFIPSVDGGGQGVAMVTAVAARL 473
>ref|XP_003134931.1| PREDICTED: glucokinase isoform 1 [Sus scrofa].
Length = 466
Score = 234 bits (596), Expect = 7e-62
Identities = 110/215 (51%), Positives = 154/215 (71%)
Frame = +1
Query: 1 VEMLEGTEGRMCINMEWGAFGDNGCLDDIRTIYDKMVDEYSLNAGKQRYEKMISGMYLGE 180
VE++EG EGRMC+N EWGAFGD+G LD+ YD++VDE SLN G+Q YEK+I G Y+GE
Sbjct: 242 VELVEGDEGRMCVNTEWGAFGDSGELDEFLLEYDRVVDENSLNPGQQLYEKLIGGKYMGE 301
Query: 181 IVRNILIDFTKRGFLFRGQISEPLKTRGIFQTKYLSQIESDRLALLQVRAILQQLGLNST 360
+VR +L+ LF G+ SE L+TRG F+T+++SQ+ESD Q+ IL LGL +
Sbjct: 302 LVRLVLLKLVDENLLFHGEASEQLRTRGAFETRFVSQVESDSGDRKQIYNILSTLGLRPS 361
Query: 361 CDDSILVKTVCGVVSKRAAQLCGAGMAAVVDKIRENRGLDHLNVTVGVDGTLYKLHPHFS 540
D +V+ C VS RAA +C AG+A V++++RE+R D + +TVGVDG++YKLHP F
Sbjct: 362 ATDCDIVRRACESVSTRAAHMCAAGLAGVINRMRESRSEDVMRITVGVDGSVYKLHPSFK 421
Query: 541 RIMHQTVKELSPKCNVSFLLSEDGSGKGAALITAV 645
H +V+ L+P C ++F+ SE+GSG+GAALI+AV
Sbjct: 422 ERFHASVRRLTPSCEITFIESEEGSGRGAALISAV 456
Database: RefSeq49_SP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 11,343,932
Number of sequences in database: 24,897
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 24897
Number of Hits to DB: 23,330,695
Number of extensions: 668100
Number of successful extensions: 2640
Number of sequences better than 1.0e-05: 5
Number of HSP's gapped: 2628
Number of HSP's successfully gapped: 9
Length of query: 310
Length of database: 11,343,932
Length adjustment: 99
Effective length of query: 211
Effective length of database: 8,879,129
Effective search space: 1873496219
Effective search space used: 1873496219
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 33 (17.3 bits)
Search to RefSeqMP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-014830
(932 letters)
Database: RefSeq49_MP.fasta
30,036 sequences; 15,617,559 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001139572.1| hexokinase-1 isoform HK1 [Mus musculus]. 417 e-117
Alignment gi|NP_034568.2| hexokinase-1 isoform HK1-sb [Mus musculus]. 417 e-117
Alignment gi|NP_038848.1| hexokinase-2 [Mus musculus]. 371 e-103
Alignment gi|NP_663394.1| putative hexokinase HKDC1 [Mus musculus]. 355 2e-98
Alignment gi|NP_001193321.1| hexokinase-3 isoform 3 [Mus musculus]. 289 2e-78
Alignment gi|NP_001193320.1| hexokinase-3 isoform 2 [Mus musculus]. 289 2e-78
Alignment gi|NP_001193319.1| hexokinase-3 isoform 1 [Mus musculus]. 289 2e-78
Alignment gi|NP_001028417.1| hexokinase-3 isoform 1 [Mus musculus]. 289 2e-78
Alignment gi|NP_034422.2| glucokinase [Mus musculus]. 232 4e-61
>ref|NP_001139572.1| hexokinase-1 isoform HK1 [Mus musculus].
Length = 918
Score = 417 bits (1071), Expect = e-117
Identities = 206/220 (93%), Positives = 217/220 (98%)
Frame = +1
Query: 1 VEMLEGTEGRMCINMEWGAFGDNGCLDDIRTIYDKMVDEYSLNAGKQRYEKMISGMYLGE 180
VEM+EG +G+MCINMEWGAFGDNGCLDDIRT +DK+VDEYSLN+GKQR+EKMISGMYLGE
Sbjct: 693 VEMVEGNQGQMCINMEWGAFGDNGCLDDIRTDFDKVVDEYSLNSGKQRFEKMISGMYLGE 752
Query: 181 IVRNILIDFTKRGFLFRGQISEPLKTRGIFQTKYLSQIESDRLALLQVRAILQQLGLNST 360
IVRNILIDFTK+GFLFRGQISEPLKTRGIF+TK+LSQIESDRLALLQVRAILQQLGLNST
Sbjct: 753 IVRNILIDFTKKGFLFRGQISEPLKTRGIFETKFLSQIESDRLALLQVRAILQQLGLNST 812
Query: 361 CDDSILVKTVCGVVSKRAAQLCGAGMAAVVDKIRENRGLDHLNVTVGVDGTLYKLHPHFS 540
CDDSILVKTVCGVVSKRAAQLCGAGMAAVV+KIRENRGLDHLNVTVGVDGTLYKLHPHFS
Sbjct: 813 CDDSILVKTVCGVVSKRAAQLCGAGMAAVVEKIRENRGLDHLNVTVGVDGTLYKLHPHFS 872
Query: 541 RIMHQTVKELSPKCNVSFLLSEDGSGKGAALITAVGVRLR 660
RIMHQTVKELSPKC VSFLLSEDGSGKGAALITAVGVRLR
Sbjct: 873 RIMHQTVKELSPKCTVSFLLSEDGSGKGAALITAVGVRLR 912
Score = 235 bits (600), Expect = 3e-62
Identities = 113/221 (51%), Positives = 159/221 (71%)
Frame = +1
Query: 1 VEMLEGTEGRMCINMEWGAFGDNGCLDDIRTIYDKMVDEYSLNAGKQRYEKMISGMYLGE 180
++++EG EGRMCIN EWGAFGD+G L+DIRT +D+ +D SLN GKQ +EKM+SGMY+GE
Sbjct: 245 IDLVEGDEGRMCINTEWGAFGDDGSLEDIRTEFDRELDRGSLNPGKQLFEKMVSGMYMGE 304
Query: 181 IVRNILIDFTKRGFLFRGQISEPLKTRGIFQTKYLSQIESDRLALLQVRAILQQLGLNST 360
+VR IL+ K LF G+I+ L TRG F T ++ IE+D+ + + IL +LG+ +
Sbjct: 305 LVRLILVKMAKESLLFEGRITPELLTRGKFTTSDVAAIETDKEGVQNAKEILTRLGVEPS 364
Query: 361 CDDSILVKTVCGVVSKRAAQLCGAGMAAVVDKIRENRGLDHLNVTVGVDGTLYKLHPHFS 540
DD + V+ VC +VS R+A L A + A+++++R+N+G L TVGVDG+LYK+HP +S
Sbjct: 365 HDDCVSVQHVCTIVSFRSANLVAATLGAILNRLRDNKGTPRLRTTVGVDGSLYKMHPQYS 424
Query: 541 RIMHQTVKELSPKCNVSFLLSEDGSGKGAALITAVGVRLRE 663
R H+T++ L P +V FLLSE GSGKGAA++TAV RL E
Sbjct: 425 RRFHKTLRRLVPDSDVRFLLSESGSGKGAAMVTAVAYRLAE 465
>ref|NP_034568.2| hexokinase-1 isoform HK1-sb [Mus musculus].
Length = 945
Score = 417 bits (1071), Expect = e-117
Identities = 206/220 (93%), Positives = 217/220 (98%)
Frame = +1
Query: 1 VEMLEGTEGRMCINMEWGAFGDNGCLDDIRTIYDKMVDEYSLNAGKQRYEKMISGMYLGE 180
VEM+EG +G+MCINMEWGAFGDNGCLDDIRT +DK+VDEYSLN+GKQR+EKMISGMYLGE
Sbjct: 720 VEMVEGNQGQMCINMEWGAFGDNGCLDDIRTDFDKVVDEYSLNSGKQRFEKMISGMYLGE 779
Query: 181 IVRNILIDFTKRGFLFRGQISEPLKTRGIFQTKYLSQIESDRLALLQVRAILQQLGLNST 360
IVRNILIDFTK+GFLFRGQISEPLKTRGIF+TK+LSQIESDRLALLQVRAILQQLGLNST
Sbjct: 780 IVRNILIDFTKKGFLFRGQISEPLKTRGIFETKFLSQIESDRLALLQVRAILQQLGLNST 839
Query: 361 CDDSILVKTVCGVVSKRAAQLCGAGMAAVVDKIRENRGLDHLNVTVGVDGTLYKLHPHFS 540
CDDSILVKTVCGVVSKRAAQLCGAGMAAVV+KIRENRGLDHLNVTVGVDGTLYKLHPHFS
Sbjct: 840 CDDSILVKTVCGVVSKRAAQLCGAGMAAVVEKIRENRGLDHLNVTVGVDGTLYKLHPHFS 899
Query: 541 RIMHQTVKELSPKCNVSFLLSEDGSGKGAALITAVGVRLR 660
RIMHQTVKELSPKC VSFLLSEDGSGKGAALITAVGVRLR
Sbjct: 900 RIMHQTVKELSPKCTVSFLLSEDGSGKGAALITAVGVRLR 939
Score = 222 bits (566), Expect = 3e-58
Identities = 113/244 (46%), Positives = 159/244 (65%), Gaps = 23/244 (9%)
Frame = +1
Query: 1 VEMLEGTEGRMCINMEWGAFGDNGCLDDIRTIYDKMVDEYSLNAGKQRYEKMISGMYLGE 180
++++EG EGRMCIN EWGAFGD+G L+DIRT +D+ +D SLN GKQ +EKM+SGMY+GE
Sbjct: 249 IDLVEGDEGRMCINTEWGAFGDDGSLEDIRTEFDRELDRGSLNPGKQLFEKMVSGMYMGE 308
Query: 181 IVRNILIDFTKRGFLFRGQISEPLKTRGIFQTKYLSQIES-------------------- 300
+VR IL+ K LF G+I+ L TRG F T ++ IE+
Sbjct: 309 LVRLILVKMAKESLLFEGRITPELLTRGKFTTSDVAAIETGWELSPDRRWYQAYMRCTQD 368
Query: 301 ---DRLALLQVRAILQQLGLNSTCDDSILVKTVCGVVSKRAAQLCGAGMAAVVDKIRENR 471
D+ + + IL +LG+ + DD + V+ VC +VS R+A L A + A+++++R+N+
Sbjct: 369 THRDKEGVQNAKEILTRLGVEPSHDDCVSVQHVCTIVSFRSANLVAATLGAILNRLRDNK 428
Query: 472 GLDHLNVTVGVDGTLYKLHPHFSRIMHQTVKELSPKCNVSFLLSEDGSGKGAALITAVGV 651
G L TVGVDG+LYK+HP +SR H+T++ L P +V FLLSE GSGKGAA++TAV
Sbjct: 429 GTPRLRTTVGVDGSLYKMHPQYSRRFHKTLRRLVPDSDVRFLLSESGSGKGAAMVTAVAY 488
Query: 652 RLRE 663
RL E
Sbjct: 489 RLAE 492
>ref|NP_038848.1| hexokinase-2 [Mus musculus].
Length = 917
Score = 371 bits (952), Expect = e-103
Identities = 180/221 (81%), Positives = 205/221 (92%)
Frame = +1
Query: 1 VEMLEGTEGRMCINMEWGAFGDNGCLDDIRTIYDKMVDEYSLNAGKQRYEKMISGMYLGE 180
VE+++G EGRMC+NMEWGAFGDNGCLDD+RT++D VDE SLN GKQR+EKMISGMYLGE
Sbjct: 693 VELVDGEEGRMCVNMEWGAFGDNGCLDDLRTVFDVAVDELSLNPGKQRFEKMISGMYLGE 752
Query: 181 IVRNILIDFTKRGFLFRGQISEPLKTRGIFQTKYLSQIESDRLALLQVRAILQQLGLNST 360
IVRNILIDFTKRG LFRG+ISE LKTRGIF+TK+LSQIESD LALLQVRAIL+ LGL ST
Sbjct: 753 IVRNILIDFTKRGLLFRGRISERLKTRGIFETKFLSQIESDCLALLQVRAILRHLGLEST 812
Query: 361 CDDSILVKTVCGVVSKRAAQLCGAGMAAVVDKIRENRGLDHLNVTVGVDGTLYKLHPHFS 540
CDDSI+VK VC VV++RAAQLCGAGMAAVVDKIRENRGLD+L VTVGVDGTLYKLHPHF+
Sbjct: 813 CDDSIIVKEVCTVVARRAAQLCGAGMAAVVDKIRENRGLDNLKVTVGVDGTLYKLHPHFA 872
Query: 541 RIMHQTVKELSPKCNVSFLLSEDGSGKGAALITAVGVRLRE 663
++MH+TV++L+PKC+VSFL SEDGSGKGAALITAV R+RE
Sbjct: 873 KVMHETVRDLAPKCDVSFLESEDGSGKGAALITAVACRIRE 913
Score = 243 bits (620), Expect = 2e-64
Identities = 117/221 (52%), Positives = 162/221 (73%)
Frame = +1
Query: 1 VEMLEGTEGRMCINMEWGAFGDNGCLDDIRTIYDKMVDEYSLNAGKQRYEKMISGMYLGE 180
++M+EG EGRMCINMEWGAFGD+G L+DIRT +D+ +D SLN GKQ +EKMISGMY+GE
Sbjct: 245 IDMVEGDEGRMCINMEWGAFGDDGTLNDIRTEFDREIDMGSLNPGKQLFEKMISGMYMGE 304
Query: 181 IVRNILIDFTKRGFLFRGQISEPLKTRGIFQTKYLSQIESDRLALLQVRAILQQLGLNST 360
+VR IL+ K LF+G++S L T G F+TK +S IE D+ + + IL +LGL+
Sbjct: 305 LVRLILVKMAKAELLFQGKLSPELLTTGSFETKDVSDIEDDKDGIQKAYQILVRLGLSPL 364
Query: 361 CDDSILVKTVCGVVSKRAAQLCGAGMAAVVDKIRENRGLDHLNVTVGVDGTLYKLHPHFS 540
+D + +C +VS R+A LC A +AAV+ +I+EN+G + L T+GVDG++YK HPHF+
Sbjct: 365 QEDCVATHRICQIVSTRSASLCAATLAAVLWRIKENKGEERLRSTIGVDGSVYKKHPHFA 424
Query: 541 RIMHQTVKELSPKCNVSFLLSEDGSGKGAALITAVGVRLRE 663
+ +H+ V+ L P C+V FL SEDGSGKGAA++TAV RL +
Sbjct: 425 KRLHKAVRRLVPDCDVRFLRSEDGSGKGAAMVTAVAYRLAD 465
>ref|NP_663394.1| putative hexokinase HKDC1 [Mus musculus].
Length = 915
Score = 355 bits (912), Expect = 2e-98
Identities = 171/221 (77%), Positives = 200/221 (90%)
Frame = +1
Query: 1 VEMLEGTEGRMCINMEWGAFGDNGCLDDIRTIYDKMVDEYSLNAGKQRYEKMISGMYLGE 180
+E+++G EGRMC+N EWG FGDNGC+DDIRT YDK VDE SLNAGKQRYEKM SGMYLGE
Sbjct: 690 IELVDGDEGRMCVNTEWGGFGDNGCIDDIRTQYDKEVDEGSLNAGKQRYEKMTSGMYLGE 749
Query: 181 IVRNILIDFTKRGFLFRGQISEPLKTRGIFQTKYLSQIESDRLALLQVRAILQQLGLNST 360
IVR ILID T++G LFRGQISE L+TRGIF+TK+LSQIESDRLALLQVR ILQQLGL+ST
Sbjct: 750 IVRRILIDLTRQGLLFRGQISERLRTRGIFETKFLSQIESDRLALLQVRRILQQLGLDST 809
Query: 361 CDDSILVKTVCGVVSKRAAQLCGAGMAAVVDKIRENRGLDHLNVTVGVDGTLYKLHPHFS 540
C+DSI+VK VCG VS+RAAQ+CGAGMAA+V+K RE++GL H VTVGVDGTLYKLHPHFS
Sbjct: 810 CEDSIVVKEVCGAVSRRAAQMCGAGMAAIVEKRREDQGLQHFKVTVGVDGTLYKLHPHFS 869
Query: 541 RIMHQTVKELSPKCNVSFLLSEDGSGKGAALITAVGVRLRE 663
RI+ +TVKEL+P+C+V+F+LSEDGSGKGAALITAV RL++
Sbjct: 870 RILQETVKELAPQCDVTFMLSEDGSGKGAALITAVAKRLQQ 910
Score = 227 bits (579), Expect = 9e-60
Identities = 111/220 (50%), Positives = 154/220 (70%)
Frame = +1
Query: 1 VEMLEGTEGRMCINMEWGAFGDNGCLDDIRTIYDKMVDEYSLNAGKQRYEKMISGMYLGE 180
++++EG EGRMCIN EWGAFGD+G L+DIRT +D+ +D SLN GKQ +EKMISG+Y+GE
Sbjct: 245 IDLVEGDEGRMCINTEWGAFGDDGALEDIRTEFDRELDLGSLNPGKQLFEKMISGLYMGE 304
Query: 181 IVRNILIDFTKRGFLFRGQISEPLKTRGIFQTKYLSQIESDRLALLQVRAILQQLGLNST 360
+VR IL+ K G LF G S L T+G +T++++ +E + L R IL LGL +
Sbjct: 305 LVRLILLKMAKVGLLFGGAKSSALHTKGKIETQHVAAMEMSKEGLANTREILVDLGLEPS 364
Query: 361 CDDSILVKTVCGVVSKRAAQLCGAGMAAVVDKIRENRGLDHLNVTVGVDGTLYKLHPHFS 540
D I V+ VC +VS R+A LC A +A ++ ++REN+ L L TVG+DGTLYK HP +
Sbjct: 365 ESDCIAVQHVCTIVSFRSANLCAAALATILTRLRENKKLARLRTTVGMDGTLYKTHPQYP 424
Query: 541 RIMHQTVKELSPKCNVSFLLSEDGSGKGAALITAVGVRLR 660
+ +H+ V+ L P C+V FLLSE GS KGAA++TAV R++
Sbjct: 425 KRLHKVVRRLVPNCDVRFLLSESGSTKGAAMVTAVASRVQ 464
>ref|NP_001193321.1| hexokinase-3 isoform 3 [Mus musculus].
Length = 867
Score = 289 bits (739), Expect = 2e-78
Identities = 144/221 (65%), Positives = 177/221 (80%)
Frame = +1
Query: 1 VEMLEGTEGRMCINMEWGAFGDNGCLDDIRTIYDKMVDEYSLNAGKQRYEKMISGMYLGE 180
V + G G MCINMEWGAFGD+G L + T +D VD+ S+N GKQR+EKMISGMYLGE
Sbjct: 643 VASVPGDSGLMCINMEWGAFGDDGSLGTLSTRFDTSVDQASINPGKQRFEKMISGMYLGE 702
Query: 181 IVRNILIDFTKRGFLFRGQISEPLKTRGIFQTKYLSQIESDRLALLQVRAILQQLGLNST 360
IVR+IL+ T G LFRGQ ++ L+ R IF+TK+LS+IESD LAL QVRAIL+ LGL T
Sbjct: 703 IVRHILLHLTNLGVLFRGQKTQCLQARDIFKTKFLSEIESDSLALRQVRAILEDLGLTLT 762
Query: 361 CDDSILVKTVCGVVSKRAAQLCGAGMAAVVDKIRENRGLDHLNVTVGVDGTLYKLHPHFS 540
DD+++V VC VS+RAAQLCGAG+AAVV+KIRENRGL L V+VGVDGTLYKLHPHFS
Sbjct: 763 SDDALMVLEVCQAVSRRAAQLCGAGVAAVVEKIRENRGLQELTVSVGVDGTLYKLHPHFS 822
Query: 541 RIMHQTVKELSPKCNVSFLLSEDGSGKGAALITAVGVRLRE 663
+++ TV++L+P+C V+FL SEDGSGKGAAL+TAV RL +
Sbjct: 823 KLVSATVRKLAPQCTVTFLQSEDGSGKGAALVTAVACRLTQ 863
Score = 183 bits (464), Expect = 2e-46
Identities = 92/219 (42%), Positives = 134/219 (61%)
Frame = +1
Query: 1 VEMLEGTEGRMCINMEWGAFGDNGCLDDIRTIYDKMVDEYSLNAGKQRYEKMISGMYLGE 180
V L+ GR C+++EWG+F D L + T +D +D SL G QR+EKMI G+YLGE
Sbjct: 201 VAALDEDRGRTCVSIEWGSFYDEDALGPVLTTFDSALDRESLTPGAQRFEKMIGGLYLGE 260
Query: 181 IVRNILIDFTKRGFLFRGQISEPLKTRGIFQTKYLSQIESDRLALLQVRAILQQLGLNST 360
+VR +L+ T+ G LF G S L ++G +++++E +V ILQ LGL+
Sbjct: 261 LVRLVLVHLTQHGVLFDGCASPALLSQGCILLDHVAEMEDTATGTARVHTILQDLGLSPR 320
Query: 361 CDDSILVKTVCGVVSKRAAQLCGAGMAAVVDKIRENRGLDHLNVTVGVDGTLYKLHPHFS 540
D+ LV+ VC V RAAQLC A +AAV+ +++ +R L V V G +++ HP F
Sbjct: 321 ASDAELVQYVCVAVCTRAAQLCAAALAAVLSRLQHSREQQTLQVAVATGGRVFERHPRFL 380
Query: 541 RIMHQTVKELSPKCNVSFLLSEDGSGKGAALITAVGVRL 657
RI+ +TV L+P C+VSF+ S DG G+G A++TAV RL
Sbjct: 381 RILKETVTLLAPNCDVSFIPSVDGGGRGVAMVTAVAARL 419
>ref|NP_001193320.1| hexokinase-3 isoform 2 [Mus musculus].
Length = 877
Score = 289 bits (739), Expect = 2e-78
Identities = 144/221 (65%), Positives = 177/221 (80%)
Frame = +1
Query: 1 VEMLEGTEGRMCINMEWGAFGDNGCLDDIRTIYDKMVDEYSLNAGKQRYEKMISGMYLGE 180
V + G G MCINMEWGAFGD+G L + T +D VD+ S+N GKQR+EKMISGMYLGE
Sbjct: 653 VASVPGDSGLMCINMEWGAFGDDGSLGTLSTRFDTSVDQASINPGKQRFEKMISGMYLGE 712
Query: 181 IVRNILIDFTKRGFLFRGQISEPLKTRGIFQTKYLSQIESDRLALLQVRAILQQLGLNST 360
IVR+IL+ T G LFRGQ ++ L+ R IF+TK+LS+IESD LAL QVRAIL+ LGL T
Sbjct: 713 IVRHILLHLTNLGVLFRGQKTQCLQARDIFKTKFLSEIESDSLALRQVRAILEDLGLTLT 772
Query: 361 CDDSILVKTVCGVVSKRAAQLCGAGMAAVVDKIRENRGLDHLNVTVGVDGTLYKLHPHFS 540
DD+++V VC VS+RAAQLCGAG+AAVV+KIRENRGL L V+VGVDGTLYKLHPHFS
Sbjct: 773 SDDALMVLEVCQAVSRRAAQLCGAGVAAVVEKIRENRGLQELTVSVGVDGTLYKLHPHFS 832
Query: 541 RIMHQTVKELSPKCNVSFLLSEDGSGKGAALITAVGVRLRE 663
+++ TV++L+P+C V+FL SEDGSGKGAAL+TAV RL +
Sbjct: 833 KLVSATVRKLAPQCTVTFLQSEDGSGKGAALVTAVACRLTQ 873
Score = 141 bits (355), Expect = 8e-34
Identities = 73/187 (39%), Positives = 110/187 (58%)
Frame = +1
Query: 1 VEMLEGTEGRMCINMEWGAFGDNGCLDDIRTIYDKMVDEYSLNAGKQRYEKMISGMYLGE 180
V L+ GR C+++EWG+F D L + T +D +D SL G QR+EKMI G+YLGE
Sbjct: 256 VAALDEDRGRTCVSIEWGSFYDEDALGPVLTTFDSALDRESLTPGAQRFEKMIGGLYLGE 315
Query: 181 IVRNILIDFTKRGFLFRGQISEPLKTRGIFQTKYLSQIESDRLALLQVRAILQQLGLNST 360
+VR +L+ T+ G LF G S L ++G +++++E +V ILQ LGL+
Sbjct: 316 LVRLVLVHLTQHGVLFDGCASPALLSQGCILLDHVAEMEDTATGTARVHTILQDLGLSPR 375
Query: 361 CDDSILVKTVCGVVSKRAAQLCGAGMAAVVDKIRENRGLDHLNVTVGVDGTLYKLHPHFS 540
D+ LV+ VC V RAAQLC A +AAV+ +++ +R L V V G +++ HP
Sbjct: 376 ASDAELVQYVCVAVCTRAAQLCAAALAAVLSRLQHSREQQTLQVAVATGGRVFERHPR-- 433
Query: 541 RIMHQTV 561
RI+ +T+
Sbjct: 434 RILEETL 440
>ref|NP_001193319.1| hexokinase-3 isoform 1 [Mus musculus].
Length = 922
Score = 289 bits (739), Expect = 2e-78
Identities = 144/221 (65%), Positives = 177/221 (80%)
Frame = +1
Query: 1 VEMLEGTEGRMCINMEWGAFGDNGCLDDIRTIYDKMVDEYSLNAGKQRYEKMISGMYLGE 180
V + G G MCINMEWGAFGD+G L + T +D VD+ S+N GKQR+EKMISGMYLGE
Sbjct: 698 VASVPGDSGLMCINMEWGAFGDDGSLGTLSTRFDTSVDQASINPGKQRFEKMISGMYLGE 757
Query: 181 IVRNILIDFTKRGFLFRGQISEPLKTRGIFQTKYLSQIESDRLALLQVRAILQQLGLNST 360
IVR+IL+ T G LFRGQ ++ L+ R IF+TK+LS+IESD LAL QVRAIL+ LGL T
Sbjct: 758 IVRHILLHLTNLGVLFRGQKTQCLQARDIFKTKFLSEIESDSLALRQVRAILEDLGLTLT 817
Query: 361 CDDSILVKTVCGVVSKRAAQLCGAGMAAVVDKIRENRGLDHLNVTVGVDGTLYKLHPHFS 540
DD+++V VC VS+RAAQLCGAG+AAVV+KIRENRGL L V+VGVDGTLYKLHPHFS
Sbjct: 818 SDDALMVLEVCQAVSRRAAQLCGAGVAAVVEKIRENRGLQELTVSVGVDGTLYKLHPHFS 877
Query: 541 RIMHQTVKELSPKCNVSFLLSEDGSGKGAALITAVGVRLRE 663
+++ TV++L+P+C V+FL SEDGSGKGAAL+TAV RL +
Sbjct: 878 KLVSATVRKLAPQCTVTFLQSEDGSGKGAALVTAVACRLTQ 918
Score = 183 bits (464), Expect = 2e-46
Identities = 92/219 (42%), Positives = 134/219 (61%)
Frame = +1
Query: 1 VEMLEGTEGRMCINMEWGAFGDNGCLDDIRTIYDKMVDEYSLNAGKQRYEKMISGMYLGE 180
V L+ GR C+++EWG+F D L + T +D +D SL G QR+EKMI G+YLGE
Sbjct: 256 VAALDEDRGRTCVSIEWGSFYDEDALGPVLTTFDSALDRESLTPGAQRFEKMIGGLYLGE 315
Query: 181 IVRNILIDFTKRGFLFRGQISEPLKTRGIFQTKYLSQIESDRLALLQVRAILQQLGLNST 360
+VR +L+ T+ G LF G S L ++G +++++E +V ILQ LGL+
Sbjct: 316 LVRLVLVHLTQHGVLFDGCASPALLSQGCILLDHVAEMEDTATGTARVHTILQDLGLSPR 375
Query: 361 CDDSILVKTVCGVVSKRAAQLCGAGMAAVVDKIRENRGLDHLNVTVGVDGTLYKLHPHFS 540
D+ LV+ VC V RAAQLC A +AAV+ +++ +R L V V G +++ HP F
Sbjct: 376 ASDAELVQYVCVAVCTRAAQLCAAALAAVLSRLQHSREQQTLQVAVATGGRVFERHPRFL 435
Query: 541 RIMHQTVKELSPKCNVSFLLSEDGSGKGAALITAVGVRL 657
RI+ +TV L+P C+VSF+ S DG G+G A++TAV RL
Sbjct: 436 RILKETVTLLAPNCDVSFIPSVDGGGRGVAMVTAVAARL 474
>ref|NP_001028417.1| hexokinase-3 isoform 1 [Mus musculus].
Length = 922
Score = 289 bits (739), Expect = 2e-78
Identities = 144/221 (65%), Positives = 177/221 (80%)
Frame = +1
Query: 1 VEMLEGTEGRMCINMEWGAFGDNGCLDDIRTIYDKMVDEYSLNAGKQRYEKMISGMYLGE 180
V + G G MCINMEWGAFGD+G L + T +D VD+ S+N GKQR+EKMISGMYLGE
Sbjct: 698 VASVPGDSGLMCINMEWGAFGDDGSLGTLSTRFDTSVDQASINPGKQRFEKMISGMYLGE 757
Query: 181 IVRNILIDFTKRGFLFRGQISEPLKTRGIFQTKYLSQIESDRLALLQVRAILQQLGLNST 360
IVR+IL+ T G LFRGQ ++ L+ R IF+TK+LS+IESD LAL QVRAIL+ LGL T
Sbjct: 758 IVRHILLHLTNLGVLFRGQKTQCLQARDIFKTKFLSEIESDSLALRQVRAILEDLGLTLT 817
Query: 361 CDDSILVKTVCGVVSKRAAQLCGAGMAAVVDKIRENRGLDHLNVTVGVDGTLYKLHPHFS 540
DD+++V VC VS+RAAQLCGAG+AAVV+KIRENRGL L V+VGVDGTLYKLHPHFS
Sbjct: 818 SDDALMVLEVCQAVSRRAAQLCGAGVAAVVEKIRENRGLQELTVSVGVDGTLYKLHPHFS 877
Query: 541 RIMHQTVKELSPKCNVSFLLSEDGSGKGAALITAVGVRLRE 663
+++ TV++L+P+C V+FL SEDGSGKGAAL+TAV RL +
Sbjct: 878 KLVSATVRKLAPQCTVTFLQSEDGSGKGAALVTAVACRLTQ 918
Score = 183 bits (464), Expect = 2e-46
Identities = 92/219 (42%), Positives = 134/219 (61%)
Frame = +1
Query: 1 VEMLEGTEGRMCINMEWGAFGDNGCLDDIRTIYDKMVDEYSLNAGKQRYEKMISGMYLGE 180
V L+ GR C+++EWG+F D L + T +D +D SL G QR+EKMI G+YLGE
Sbjct: 256 VAALDEDRGRTCVSIEWGSFYDEDALGPVLTTFDSALDRESLTPGAQRFEKMIGGLYLGE 315
Query: 181 IVRNILIDFTKRGFLFRGQISEPLKTRGIFQTKYLSQIESDRLALLQVRAILQQLGLNST 360
+VR +L+ T+ G LF G S L ++G +++++E +V ILQ LGL+
Sbjct: 316 LVRLVLVHLTQHGVLFDGCASPALLSQGCILLDHVAEMEDTATGTARVHTILQDLGLSPR 375
Query: 361 CDDSILVKTVCGVVSKRAAQLCGAGMAAVVDKIRENRGLDHLNVTVGVDGTLYKLHPHFS 540
D+ LV+ VC V RAAQLC A +AAV+ +++ +R L V V G +++ HP F
Sbjct: 376 ASDAELVQYVCVAVCTRAAQLCAAALAAVLSRLQHSREQQTLQVAVATGGRVFERHPRFL 435
Query: 541 RIMHQTVKELSPKCNVSFLLSEDGSGKGAALITAVGVRL 657
RI+ +TV L+P C+VSF+ S DG G+G A++TAV RL
Sbjct: 436 RILKETVTLLAPNCDVSFIPSVDGGGRGVAMVTAVAARL 474
>ref|NP_034422.2| glucokinase [Mus musculus].
Length = 465
Score = 232 bits (591), Expect = 4e-61
Identities = 108/218 (49%), Positives = 156/218 (71%)
Frame = +1
Query: 1 VEMLEGTEGRMCINMEWGAFGDNGCLDDIRTIYDKMVDEYSLNAGKQRYEKMISGMYLGE 180
VE++EG EGRMC+N EWGAFG++G LD+ YD+MVDE S+N G+Q YEK+I G Y+GE
Sbjct: 241 VELVEGDEGRMCVNTEWGAFGNSGELDEFLLEYDRMVDESSVNPGQQLYEKIIGGKYMGE 300
Query: 181 IVRNILIDFTKRGFLFRGQISEPLKTRGIFQTKYLSQIESDRLALLQVRAILQQLGLNST 360
+VR +L+ + LF G+ SE L+TRG F+T+++SQ+ESD Q+ IL LGL +
Sbjct: 301 LVRLVLLKLVEENLLFHGEASEQLRTRGAFETRFVSQVESDSGDRRQILNILSTLGLRPS 360
Query: 361 CDDSILVKTVCGVVSKRAAQLCGAGMAAVVDKIRENRGLDHLNVTVGVDGTLYKLHPHFS 540
D +V+ C VS RAA +C AG+A V++++RE+R D + +TVGVDG++YKLHP F
Sbjct: 361 VADCDIVRRACESVSTRAAHMCSAGLAGVINRMRESRSEDVMRITVGVDGSVYKLHPSFK 420
Query: 541 RIMHQTVKELSPKCNVSFLLSEDGSGKGAALITAVGVR 654
H +V+ L+P C ++F+ SE+GSG+GAAL++AV +
Sbjct: 421 ERFHASVRRLTPNCEITFIESEEGSGRGAALVSAVACK 458
Database: RefSeq49_MP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 15,617,559
Number of sequences in database: 30,036
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 30036
Number of Hits to DB: 31,490,050
Number of extensions: 885776
Number of successful extensions: 3277
Number of sequences better than 1.0e-05: 9
Number of HSP's gapped: 3264
Number of HSP's successfully gapped: 17
Length of query: 310
Length of database: 15,617,559
Length adjustment: 101
Effective length of query: 209
Effective length of database: 12,583,923
Effective search space: 2630039907
Effective search space used: 2630039907
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)
Search to RefSeqHP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-014830
(932 letters)
Database: RefSeq49_HP.fasta
32,964 sequences; 18,297,164 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_000179.2| hexokinase-1 isoform HKI [Homo sapiens]. 416 e-116
Alignment gi|NP_277032.1| hexokinase-1 isoform HKI-ta/tb [Homo sapiens]. 416 e-116
Alignment gi|NP_277033.1| hexokinase-1 isoform HKI-ta/tb [Homo sapiens]. 416 e-116
Alignment gi|NP_277035.2| hexokinase-1 isoform HKI-td [Homo sapiens]. 416 e-116
Alignment gi|NP_277031.1| hexokinase-1 isoform HKI-R [Homo sapiens]. 416 e-116
Alignment gi|NP_000180.2| hexokinase-2 [Homo sapiens]. 370 e-102
Alignment gi|NP_079406.3| putative hexokinase HKDC1 [Homo sapiens]. 355 3e-98
Alignment gi|NP_002106.2| hexokinase-3 [Homo sapiens]. 286 2e-77
Alignment gi|NP_277043.1| glucokinase isoform 3 [Homo sapiens]. 231 5e-61
Alignment gi|NP_277042.1| glucokinase isoform 2 [Homo sapiens]. 231 5e-61
>ref|NP_000179.2| hexokinase-1 isoform HKI [Homo sapiens].
Length = 917
Score = 416 bits (1070), Expect = e-116
Identities = 207/220 (94%), Positives = 216/220 (98%)
Frame = +1
Query: 1 VEMLEGTEGRMCINMEWGAFGDNGCLDDIRTIYDKMVDEYSLNAGKQRYEKMISGMYLGE 180
VEM+EG +G+MCINMEWGAFGDNGCLDDIRT YD++VDEYSLNAGKQRYEKMISGMYLGE
Sbjct: 693 VEMVEGDQGQMCINMEWGAFGDNGCLDDIRTHYDRLVDEYSLNAGKQRYEKMISGMYLGE 752
Query: 181 IVRNILIDFTKRGFLFRGQISEPLKTRGIFQTKYLSQIESDRLALLQVRAILQQLGLNST 360
IVRNILIDFTK+GFLFRGQISE LKTRGIF+TK+LSQIESDRLALLQVRAILQQLGLNST
Sbjct: 753 IVRNILIDFTKKGFLFRGQISETLKTRGIFETKFLSQIESDRLALLQVRAILQQLGLNST 812
Query: 361 CDDSILVKTVCGVVSKRAAQLCGAGMAAVVDKIRENRGLDHLNVTVGVDGTLYKLHPHFS 540
CDDSILVKTVCGVVS+RAAQLCGAGMAAVVDKIRENRGLD LNVTVGVDGTLYKLHPHFS
Sbjct: 813 CDDSILVKTVCGVVSRRAAQLCGAGMAAVVDKIRENRGLDRLNVTVGVDGTLYKLHPHFS 872
Query: 541 RIMHQTVKELSPKCNVSFLLSEDGSGKGAALITAVGVRLR 660
RIMHQTVKELSPKCNVSFLLSEDGSGKGAALITAVGVRLR
Sbjct: 873 RIMHQTVKELSPKCNVSFLLSEDGSGKGAALITAVGVRLR 912
Score = 238 bits (607), Expect = 6e-63
Identities = 116/221 (52%), Positives = 158/221 (71%)
Frame = +1
Query: 1 VEMLEGTEGRMCINMEWGAFGDNGCLDDIRTIYDKMVDEYSLNAGKQRYEKMISGMYLGE 180
++++EG EGRMCIN EWGAFGD+G L+DIRT +D+ +D SLN GKQ +EKM+SGMYLGE
Sbjct: 245 IDLVEGDEGRMCINTEWGAFGDDGSLEDIRTEFDREIDRGSLNPGKQLFEKMVSGMYLGE 304
Query: 181 IVRNILIDFTKRGFLFRGQISEPLKTRGIFQTKYLSQIESDRLALLQVRAILQQLGLNST 360
+VR IL+ K G LF G+I+ L TRG F T +S IE ++ L + IL +LG+ +
Sbjct: 305 LVRLILVKMAKEGLLFEGRITPELLTRGKFNTSDVSAIEKNKEGLHNAKEILTRLGVEPS 364
Query: 361 CDDSILVKTVCGVVSKRAAQLCGAGMAAVVDKIRENRGLDHLNVTVGVDGTLYKLHPHFS 540
DD + V+ VC +VS R+A L A + A+++++R+N+G L TVGVDG+LYK HP +S
Sbjct: 365 DDDCVSVQHVCTIVSFRSANLVAATLGAILNRLRDNKGTPRLRTTVGVDGSLYKTHPQYS 424
Query: 541 RIMHQTVKELSPKCNVSFLLSEDGSGKGAALITAVGVRLRE 663
R H+T++ L P +V FLLSE GSGKGAA++TAV RL E
Sbjct: 425 RRFHKTLRRLVPDSDVRFLLSESGSGKGAAMVTAVAYRLAE 465
>ref|NP_277032.1| hexokinase-1 isoform HKI-ta/tb [Homo sapiens].
Length = 921
Score = 416 bits (1070), Expect = e-116
Identities = 207/220 (94%), Positives = 216/220 (98%)
Frame = +1
Query: 1 VEMLEGTEGRMCINMEWGAFGDNGCLDDIRTIYDKMVDEYSLNAGKQRYEKMISGMYLGE 180
VEM+EG +G+MCINMEWGAFGDNGCLDDIRT YD++VDEYSLNAGKQRYEKMISGMYLGE
Sbjct: 697 VEMVEGDQGQMCINMEWGAFGDNGCLDDIRTHYDRLVDEYSLNAGKQRYEKMISGMYLGE 756
Query: 181 IVRNILIDFTKRGFLFRGQISEPLKTRGIFQTKYLSQIESDRLALLQVRAILQQLGLNST 360
IVRNILIDFTK+GFLFRGQISE LKTRGIF+TK+LSQIESDRLALLQVRAILQQLGLNST
Sbjct: 757 IVRNILIDFTKKGFLFRGQISETLKTRGIFETKFLSQIESDRLALLQVRAILQQLGLNST 816
Query: 361 CDDSILVKTVCGVVSKRAAQLCGAGMAAVVDKIRENRGLDHLNVTVGVDGTLYKLHPHFS 540
CDDSILVKTVCGVVS+RAAQLCGAGMAAVVDKIRENRGLD LNVTVGVDGTLYKLHPHFS
Sbjct: 817 CDDSILVKTVCGVVSRRAAQLCGAGMAAVVDKIRENRGLDRLNVTVGVDGTLYKLHPHFS 876
Query: 541 RIMHQTVKELSPKCNVSFLLSEDGSGKGAALITAVGVRLR 660
RIMHQTVKELSPKCNVSFLLSEDGSGKGAALITAVGVRLR
Sbjct: 877 RIMHQTVKELSPKCNVSFLLSEDGSGKGAALITAVGVRLR 916
Score = 238 bits (607), Expect = 6e-63
Identities = 116/221 (52%), Positives = 158/221 (71%)
Frame = +1
Query: 1 VEMLEGTEGRMCINMEWGAFGDNGCLDDIRTIYDKMVDEYSLNAGKQRYEKMISGMYLGE 180
++++EG EGRMCIN EWGAFGD+G L+DIRT +D+ +D SLN GKQ +EKM+SGMYLGE
Sbjct: 249 IDLVEGDEGRMCINTEWGAFGDDGSLEDIRTEFDREIDRGSLNPGKQLFEKMVSGMYLGE 308
Query: 181 IVRNILIDFTKRGFLFRGQISEPLKTRGIFQTKYLSQIESDRLALLQVRAILQQLGLNST 360
+VR IL+ K G LF G+I+ L TRG F T +S IE ++ L + IL +LG+ +
Sbjct: 309 LVRLILVKMAKEGLLFEGRITPELLTRGKFNTSDVSAIEKNKEGLHNAKEILTRLGVEPS 368
Query: 361 CDDSILVKTVCGVVSKRAAQLCGAGMAAVVDKIRENRGLDHLNVTVGVDGTLYKLHPHFS 540
DD + V+ VC +VS R+A L A + A+++++R+N+G L TVGVDG+LYK HP +S
Sbjct: 369 DDDCVSVQHVCTIVSFRSANLVAATLGAILNRLRDNKGTPRLRTTVGVDGSLYKTHPQYS 428
Query: 541 RIMHQTVKELSPKCNVSFLLSEDGSGKGAALITAVGVRLRE 663
R H+T++ L P +V FLLSE GSGKGAA++TAV RL E
Sbjct: 429 RRFHKTLRRLVPDSDVRFLLSESGSGKGAAMVTAVAYRLAE 469
>ref|NP_277033.1| hexokinase-1 isoform HKI-ta/tb [Homo sapiens].
Length = 921
Score = 416 bits (1070), Expect = e-116
Identities = 207/220 (94%), Positives = 216/220 (98%)
Frame = +1
Query: 1 VEMLEGTEGRMCINMEWGAFGDNGCLDDIRTIYDKMVDEYSLNAGKQRYEKMISGMYLGE 180
VEM+EG +G+MCINMEWGAFGDNGCLDDIRT YD++VDEYSLNAGKQRYEKMISGMYLGE
Sbjct: 697 VEMVEGDQGQMCINMEWGAFGDNGCLDDIRTHYDRLVDEYSLNAGKQRYEKMISGMYLGE 756
Query: 181 IVRNILIDFTKRGFLFRGQISEPLKTRGIFQTKYLSQIESDRLALLQVRAILQQLGLNST 360
IVRNILIDFTK+GFLFRGQISE LKTRGIF+TK+LSQIESDRLALLQVRAILQQLGLNST
Sbjct: 757 IVRNILIDFTKKGFLFRGQISETLKTRGIFETKFLSQIESDRLALLQVRAILQQLGLNST 816
Query: 361 CDDSILVKTVCGVVSKRAAQLCGAGMAAVVDKIRENRGLDHLNVTVGVDGTLYKLHPHFS 540
CDDSILVKTVCGVVS+RAAQLCGAGMAAVVDKIRENRGLD LNVTVGVDGTLYKLHPHFS
Sbjct: 817 CDDSILVKTVCGVVSRRAAQLCGAGMAAVVDKIRENRGLDRLNVTVGVDGTLYKLHPHFS 876
Query: 541 RIMHQTVKELSPKCNVSFLLSEDGSGKGAALITAVGVRLR 660
RIMHQTVKELSPKCNVSFLLSEDGSGKGAALITAVGVRLR
Sbjct: 877 RIMHQTVKELSPKCNVSFLLSEDGSGKGAALITAVGVRLR 916
Score = 238 bits (607), Expect = 6e-63
Identities = 116/221 (52%), Positives = 158/221 (71%)
Frame = +1
Query: 1 VEMLEGTEGRMCINMEWGAFGDNGCLDDIRTIYDKMVDEYSLNAGKQRYEKMISGMYLGE 180
++++EG EGRMCIN EWGAFGD+G L+DIRT +D+ +D SLN GKQ +EKM+SGMYLGE
Sbjct: 249 IDLVEGDEGRMCINTEWGAFGDDGSLEDIRTEFDREIDRGSLNPGKQLFEKMVSGMYLGE 308
Query: 181 IVRNILIDFTKRGFLFRGQISEPLKTRGIFQTKYLSQIESDRLALLQVRAILQQLGLNST 360
+VR IL+ K G LF G+I+ L TRG F T +S IE ++ L + IL +LG+ +
Sbjct: 309 LVRLILVKMAKEGLLFEGRITPELLTRGKFNTSDVSAIEKNKEGLHNAKEILTRLGVEPS 368
Query: 361 CDDSILVKTVCGVVSKRAAQLCGAGMAAVVDKIRENRGLDHLNVTVGVDGTLYKLHPHFS 540
DD + V+ VC +VS R+A L A + A+++++R+N+G L TVGVDG+LYK HP +S
Sbjct: 369 DDDCVSVQHVCTIVSFRSANLVAATLGAILNRLRDNKGTPRLRTTVGVDGSLYKTHPQYS 428
Query: 541 RIMHQTVKELSPKCNVSFLLSEDGSGKGAALITAVGVRLRE 663
R H+T++ L P +V FLLSE GSGKGAA++TAV RL E
Sbjct: 429 RRFHKTLRRLVPDSDVRFLLSESGSGKGAAMVTAVAYRLAE 469
>ref|NP_277035.2| hexokinase-1 isoform HKI-td [Homo sapiens].
Length = 905
Score = 416 bits (1070), Expect = e-116
Identities = 207/220 (94%), Positives = 216/220 (98%)
Frame = +1
Query: 1 VEMLEGTEGRMCINMEWGAFGDNGCLDDIRTIYDKMVDEYSLNAGKQRYEKMISGMYLGE 180
VEM+EG +G+MCINMEWGAFGDNGCLDDIRT YD++VDEYSLNAGKQRYEKMISGMYLGE
Sbjct: 681 VEMVEGDQGQMCINMEWGAFGDNGCLDDIRTHYDRLVDEYSLNAGKQRYEKMISGMYLGE 740
Query: 181 IVRNILIDFTKRGFLFRGQISEPLKTRGIFQTKYLSQIESDRLALLQVRAILQQLGLNST 360
IVRNILIDFTK+GFLFRGQISE LKTRGIF+TK+LSQIESDRLALLQVRAILQQLGLNST
Sbjct: 741 IVRNILIDFTKKGFLFRGQISETLKTRGIFETKFLSQIESDRLALLQVRAILQQLGLNST 800
Query: 361 CDDSILVKTVCGVVSKRAAQLCGAGMAAVVDKIRENRGLDHLNVTVGVDGTLYKLHPHFS 540
CDDSILVKTVCGVVS+RAAQLCGAGMAAVVDKIRENRGLD LNVTVGVDGTLYKLHPHFS
Sbjct: 801 CDDSILVKTVCGVVSRRAAQLCGAGMAAVVDKIRENRGLDRLNVTVGVDGTLYKLHPHFS 860
Query: 541 RIMHQTVKELSPKCNVSFLLSEDGSGKGAALITAVGVRLR 660
RIMHQTVKELSPKCNVSFLLSEDGSGKGAALITAVGVRLR
Sbjct: 861 RIMHQTVKELSPKCNVSFLLSEDGSGKGAALITAVGVRLR 900
Score = 238 bits (607), Expect = 6e-63
Identities = 116/221 (52%), Positives = 158/221 (71%)
Frame = +1
Query: 1 VEMLEGTEGRMCINMEWGAFGDNGCLDDIRTIYDKMVDEYSLNAGKQRYEKMISGMYLGE 180
++++EG EGRMCIN EWGAFGD+G L+DIRT +D+ +D SLN GKQ +EKM+SGMYLGE
Sbjct: 233 IDLVEGDEGRMCINTEWGAFGDDGSLEDIRTEFDREIDRGSLNPGKQLFEKMVSGMYLGE 292
Query: 181 IVRNILIDFTKRGFLFRGQISEPLKTRGIFQTKYLSQIESDRLALLQVRAILQQLGLNST 360
+VR IL+ K G LF G+I+ L TRG F T +S IE ++ L + IL +LG+ +
Sbjct: 293 LVRLILVKMAKEGLLFEGRITPELLTRGKFNTSDVSAIEKNKEGLHNAKEILTRLGVEPS 352
Query: 361 CDDSILVKTVCGVVSKRAAQLCGAGMAAVVDKIRENRGLDHLNVTVGVDGTLYKLHPHFS 540
DD + V+ VC +VS R+A L A + A+++++R+N+G L TVGVDG+LYK HP +S
Sbjct: 353 DDDCVSVQHVCTIVSFRSANLVAATLGAILNRLRDNKGTPRLRTTVGVDGSLYKTHPQYS 412
Query: 541 RIMHQTVKELSPKCNVSFLLSEDGSGKGAALITAVGVRLRE 663
R H+T++ L P +V FLLSE GSGKGAA++TAV RL E
Sbjct: 413 RRFHKTLRRLVPDSDVRFLLSESGSGKGAAMVTAVAYRLAE 453
>ref|NP_277031.1| hexokinase-1 isoform HKI-R [Homo sapiens].
Length = 916
Score = 416 bits (1070), Expect = e-116
Identities = 207/220 (94%), Positives = 216/220 (98%)
Frame = +1
Query: 1 VEMLEGTEGRMCINMEWGAFGDNGCLDDIRTIYDKMVDEYSLNAGKQRYEKMISGMYLGE 180
VEM+EG +G+MCINMEWGAFGDNGCLDDIRT YD++VDEYSLNAGKQRYEKMISGMYLGE
Sbjct: 692 VEMVEGDQGQMCINMEWGAFGDNGCLDDIRTHYDRLVDEYSLNAGKQRYEKMISGMYLGE 751
Query: 181 IVRNILIDFTKRGFLFRGQISEPLKTRGIFQTKYLSQIESDRLALLQVRAILQQLGLNST 360
IVRNILIDFTK+GFLFRGQISE LKTRGIF+TK+LSQIESDRLALLQVRAILQQLGLNST
Sbjct: 752 IVRNILIDFTKKGFLFRGQISETLKTRGIFETKFLSQIESDRLALLQVRAILQQLGLNST 811
Query: 361 CDDSILVKTVCGVVSKRAAQLCGAGMAAVVDKIRENRGLDHLNVTVGVDGTLYKLHPHFS 540
CDDSILVKTVCGVVS+RAAQLCGAGMAAVVDKIRENRGLD LNVTVGVDGTLYKLHPHFS
Sbjct: 812 CDDSILVKTVCGVVSRRAAQLCGAGMAAVVDKIRENRGLDRLNVTVGVDGTLYKLHPHFS 871
Query: 541 RIMHQTVKELSPKCNVSFLLSEDGSGKGAALITAVGVRLR 660
RIMHQTVKELSPKCNVSFLLSEDGSGKGAALITAVGVRLR
Sbjct: 872 RIMHQTVKELSPKCNVSFLLSEDGSGKGAALITAVGVRLR 911
Score = 238 bits (607), Expect = 6e-63
Identities = 116/221 (52%), Positives = 158/221 (71%)
Frame = +1
Query: 1 VEMLEGTEGRMCINMEWGAFGDNGCLDDIRTIYDKMVDEYSLNAGKQRYEKMISGMYLGE 180
++++EG EGRMCIN EWGAFGD+G L+DIRT +D+ +D SLN GKQ +EKM+SGMYLGE
Sbjct: 244 IDLVEGDEGRMCINTEWGAFGDDGSLEDIRTEFDREIDRGSLNPGKQLFEKMVSGMYLGE 303
Query: 181 IVRNILIDFTKRGFLFRGQISEPLKTRGIFQTKYLSQIESDRLALLQVRAILQQLGLNST 360
+VR IL+ K G LF G+I+ L TRG F T +S IE ++ L + IL +LG+ +
Sbjct: 304 LVRLILVKMAKEGLLFEGRITPELLTRGKFNTSDVSAIEKNKEGLHNAKEILTRLGVEPS 363
Query: 361 CDDSILVKTVCGVVSKRAAQLCGAGMAAVVDKIRENRGLDHLNVTVGVDGTLYKLHPHFS 540
DD + V+ VC +VS R+A L A + A+++++R+N+G L TVGVDG+LYK HP +S
Sbjct: 364 DDDCVSVQHVCTIVSFRSANLVAATLGAILNRLRDNKGTPRLRTTVGVDGSLYKTHPQYS 423
Query: 541 RIMHQTVKELSPKCNVSFLLSEDGSGKGAALITAVGVRLRE 663
R H+T++ L P +V FLLSE GSGKGAA++TAV RL E
Sbjct: 424 RRFHKTLRRLVPDSDVRFLLSESGSGKGAAMVTAVAYRLAE 464
>ref|NP_000180.2| hexokinase-2 [Homo sapiens].
Length = 917
Score = 370 bits (949), Expect = e-102
Identities = 182/221 (82%), Positives = 202/221 (91%)
Frame = +1
Query: 1 VEMLEGTEGRMCINMEWGAFGDNGCLDDIRTIYDKMVDEYSLNAGKQRYEKMISGMYLGE 180
VE++EG EGRMC+NMEWGAFGDNGCLDD RT +D VDE SLN GKQR+EKMISGMYLGE
Sbjct: 693 VELVEGEEGRMCVNMEWGAFGDNGCLDDFRTEFDVAVDELSLNPGKQRFEKMISGMYLGE 752
Query: 181 IVRNILIDFTKRGFLFRGQISEPLKTRGIFQTKYLSQIESDRLALLQVRAILQQLGLNST 360
IVRNILIDFTKRG LFRG+ISE LKTRGIF+TK+LSQIESD LALLQVRAILQ LGL ST
Sbjct: 753 IVRNILIDFTKRGLLFRGRISERLKTRGIFETKFLSQIESDCLALLQVRAILQHLGLEST 812
Query: 361 CDDSILVKTVCGVVSKRAAQLCGAGMAAVVDKIRENRGLDHLNVTVGVDGTLYKLHPHFS 540
CDDSI+VK VC VV++RAAQLCGAGMAAVVD+IRENRGLD L VTVGVDGTLYKLHPHF+
Sbjct: 813 CDDSIIVKEVCTVVARRAAQLCGAGMAAVVDRIRENRGLDALKVTVGVDGTLYKLHPHFA 872
Query: 541 RIMHQTVKELSPKCNVSFLLSEDGSGKGAALITAVGVRLRE 663
++MH+TVK+L+PKC+VSFL SEDGSGKGAALITAV R+RE
Sbjct: 873 KVMHETVKDLAPKCDVSFLQSEDGSGKGAALITAVACRIRE 913
Score = 247 bits (630), Expect = 1e-65
Identities = 117/221 (52%), Positives = 163/221 (73%)
Frame = +1
Query: 1 VEMLEGTEGRMCINMEWGAFGDNGCLDDIRTIYDKMVDEYSLNAGKQRYEKMISGMYLGE 180
++M+EG EGRMCINMEWGAFGD+G L+DIRT +D+ +D SLN GKQ +EKMISGMY+GE
Sbjct: 245 IDMVEGDEGRMCINMEWGAFGDDGSLNDIRTEFDQEIDMGSLNPGKQLFEKMISGMYMGE 304
Query: 181 IVRNILIDFTKRGFLFRGQISEPLKTRGIFQTKYLSQIESDRLALLQVRAILQQLGLNST 360
+VR IL+ K LF G++S L G F+TK +S IE ++ + + R +L +LGL+ T
Sbjct: 305 LVRLILVKMAKEELLFGGKLSPELLNTGRFETKDISDIEGEKDGIRKAREVLMRLGLDPT 364
Query: 361 CDDSILVKTVCGVVSKRAAQLCGAGMAAVVDKIRENRGLDHLNVTVGVDGTLYKLHPHFS 540
+D + +C +VS R+A LC A +AAV+ +I+EN+G + L T+GVDG++YK HPHF+
Sbjct: 365 QEDCVATHRICQIVSTRSASLCAATLAAVLQRIKENKGEERLRSTIGVDGSVYKKHPHFA 424
Query: 541 RIMHQTVKELSPKCNVSFLLSEDGSGKGAALITAVGVRLRE 663
+ +H+TV+ L P C+V FL SEDGSGKGAA++TAV RL +
Sbjct: 425 KRLHKTVRRLVPGCDVRFLRSEDGSGKGAAMVTAVAYRLAD 465
>ref|NP_079406.3| putative hexokinase HKDC1 [Homo sapiens].
Length = 917
Score = 355 bits (912), Expect = 3e-98
Identities = 172/221 (77%), Positives = 200/221 (90%)
Frame = +1
Query: 1 VEMLEGTEGRMCINMEWGAFGDNGCLDDIRTIYDKMVDEYSLNAGKQRYEKMISGMYLGE 180
+EM+EG EG+MCIN EWG FGDNGC+DDIRT YD VDE SLN GKQRYEKM SGMYLGE
Sbjct: 692 IEMVEGGEGKMCINTEWGGFGDNGCIDDIRTRYDTEVDEGSLNPGKQRYEKMTSGMYLGE 751
Query: 181 IVRNILIDFTKRGFLFRGQISEPLKTRGIFQTKYLSQIESDRLALLQVRAILQQLGLNST 360
IVR ILID TK+G LFRGQISE L+TRGIF+TK+LSQIESDRLALLQVR ILQQLGL+ST
Sbjct: 752 IVRQILIDLTKQGLLFRGQISERLRTRGIFETKFLSQIESDRLALLQVRRILQQLGLDST 811
Query: 361 CDDSILVKTVCGVVSKRAAQLCGAGMAAVVDKIRENRGLDHLNVTVGVDGTLYKLHPHFS 540
C+DSI+VK VCG VS+RAAQLCGAG+AA+V+K RE++GL+HL +TVGVDGTLYKLHPHFS
Sbjct: 812 CEDSIVVKEVCGAVSRRAAQLCGAGLAAIVEKRREDQGLEHLRITVGVDGTLYKLHPHFS 871
Query: 541 RIMHQTVKELSPKCNVSFLLSEDGSGKGAALITAVGVRLRE 663
RI+ +TVKEL+P+C+V+F+LSEDGSGKGAALITAV RL++
Sbjct: 872 RILQETVKELAPRCDVTFMLSEDGSGKGAALITAVAKRLQQ 912
Score = 232 bits (592), Expect = 3e-61
Identities = 112/220 (50%), Positives = 159/220 (72%)
Frame = +1
Query: 1 VEMLEGTEGRMCINMEWGAFGDNGCLDDIRTIYDKMVDEYSLNAGKQRYEKMISGMYLGE 180
++++EG EGRMCIN EWGAFGD+G L+DIRT +D+ +D SLN GKQ +EKMISG+YLGE
Sbjct: 245 IDLVEGDEGRMCINTEWGAFGDDGALEDIRTEFDRELDLGSLNPGKQLFEKMISGLYLGE 304
Query: 181 IVRNILIDFTKRGFLFRGQISEPLKTRGIFQTKYLSQIESDRLALLQVRAILQQLGLNST 360
+VR IL+ K G LF G+ S L T+G +T++++ +E + L R IL LGL +
Sbjct: 305 LVRLILLKMAKAGLLFGGEKSSALHTKGKIETRHVAAMEKYKEGLANTREILVDLGLEPS 364
Query: 361 CDDSILVKTVCGVVSKRAAQLCGAGMAAVVDKIRENRGLDHLNVTVGVDGTLYKLHPHFS 540
D I V+ VC +VS R+A LC A +AA++ ++REN+ ++ L TVG+DGTLYK+HP +
Sbjct: 365 EADCIAVQHVCTIVSFRSANLCAAALAAILTRLRENKKVERLRTTVGMDGTLYKIHPQYP 424
Query: 541 RIMHQTVKELSPKCNVSFLLSEDGSGKGAALITAVGVRLR 660
+ +H+ V++L P C+V FLLSE GS KGAA++TAV R++
Sbjct: 425 KRLHKVVRKLVPSCDVRFLLSESGSTKGAAMVTAVASRVQ 464
>ref|NP_002106.2| hexokinase-3 [Homo sapiens].
Length = 923
Score = 286 bits (731), Expect = 2e-77
Identities = 145/216 (67%), Positives = 175/216 (81%)
Frame = +1
Query: 16 GTEGRMCINMEWGAFGDNGCLDDIRTIYDKMVDEYSLNAGKQRYEKMISGMYLGEIVRNI 195
G GRMCINMEWGAFGD+G L + T +D VD+ S+N GKQR+EKMISGMYLGEIVR+I
Sbjct: 704 GDSGRMCINMEWGAFGDDGSLAMLSTRFDASVDQASINPGKQRFEKMISGMYLGEIVRHI 763
Query: 196 LIDFTKRGFLFRGQISEPLKTRGIFQTKYLSQIESDRLALLQVRAILQQLGLNSTCDDSI 375
L+ T G LFRGQ + L+TR IF+TK+LS+IESD LAL QVRAIL+ LGL T DD++
Sbjct: 764 LLHLTSLGVLFRGQQIQRLQTRDIFKTKFLSEIESDSLALRQVRAILEDLGLPLTSDDAL 823
Query: 376 LVKTVCGVVSKRAAQLCGAGMAAVVDKIRENRGLDHLNVTVGVDGTLYKLHPHFSRIMHQ 555
+V VC VS+RAAQLCGAG+AAVV+KIRENRGL+ L V+VGVDGTLYKLHP FS ++
Sbjct: 824 MVLEVCQAVSQRAAQLCGAGVAAVVEKIRENRGLEELAVSVGVDGTLYKLHPRFSSLVAA 883
Query: 556 TVKELSPKCNVSFLLSEDGSGKGAALITAVGVRLRE 663
TV+EL+P+C V+FL SEDGSGKGAAL+TAV RL +
Sbjct: 884 TVRELAPRCVVTFLQSEDGSGKGAALVTAVACRLAQ 919
Score = 179 bits (453), Expect = 4e-45
Identities = 91/219 (41%), Positives = 134/219 (61%)
Frame = +1
Query: 1 VEMLEGTEGRMCINMEWGAFGDNGCLDDIRTIYDKMVDEYSLNAGKQRYEKMISGMYLGE 180
V +L+ GR+C+++EWG+F D+G L + T +D +D SLN G QR+EKMI G+YLGE
Sbjct: 258 VAVLDEDRGRVCVSVEWGSFSDDGALGPVLTTFDHTLDHESLNPGAQRFEKMIGGLYLGE 317
Query: 181 IVRNILIDFTKRGFLFRGQISEPLKTRGIFQTKYLSQIESDRLALLQVRAILQQLGLNST 360
+VR +L + G LF G S L ++G ++++++E +V AILQ LGL+
Sbjct: 318 LVRLVLAHLARCGVLFGGCTSPALLSQGSILLEHVAEMEDPSTGAARVHAILQDLGLSPG 377
Query: 361 CDDSILVKTVCGVVSKRAAQLCGAGMAAVVDKIRENRGLDHLNVTVGVDGTLYKLHPHFS 540
D LV+ VC V RAAQLC A +AAV+ ++ +R L V V G + + HP F
Sbjct: 378 ASDVELVQHVCAAVCTRAAQLCAAALAAVLSCLQHSREQQTLQVAVATGGRVCERHPRFC 437
Query: 541 RIMHQTVKELSPKCNVSFLLSEDGSGKGAALITAVGVRL 657
++ TV L+P+C+VS + S DG G+G A++TAV RL
Sbjct: 438 SVLQGTVMLLAPECDVSLIPSVDGGGRGVAMVTAVAARL 476
>ref|NP_277043.1| glucokinase isoform 3 [Homo sapiens].
Length = 464
Score = 231 bits (590), Expect = 5e-61
Identities = 108/218 (49%), Positives = 154/218 (70%)
Frame = +1
Query: 1 VEMLEGTEGRMCINMEWGAFGDNGCLDDIRTIYDKMVDEYSLNAGKQRYEKMISGMYLGE 180
VE++EG EGRMC+N EWGAFGD+G LD+ YD++VDE S N G+Q YEK+I G Y+GE
Sbjct: 240 VELVEGDEGRMCVNTEWGAFGDSGELDEFLLEYDRLVDESSANPGQQLYEKLIGGKYMGE 299
Query: 181 IVRNILIDFTKRGFLFRGQISEPLKTRGIFQTKYLSQIESDRLALLQVRAILQQLGLNST 360
+VR +L+ LF G+ SE L+TRG F+T+++SQ+ESD Q+ IL LGL +
Sbjct: 300 LVRLVLLRLVDENLLFHGEASEQLRTRGAFETRFVSQVESDTGDRKQIYNILSTLGLRPS 359
Query: 361 CDDSILVKTVCGVVSKRAAQLCGAGMAAVVDKIRENRGLDHLNVTVGVDGTLYKLHPHFS 540
D +V+ C VS RAA +C AG+A V++++RE+R D + +TVGVDG++YKLHP F
Sbjct: 360 TTDCDIVRRACESVSTRAAHMCSAGLAGVINRMRESRSEDVMRITVGVDGSVYKLHPSFK 419
Query: 541 RIMHQTVKELSPKCNVSFLLSEDGSGKGAALITAVGVR 654
H +V+ L+P C ++F+ SE+GSG+GAAL++AV +
Sbjct: 420 ERFHASVRRLTPSCEITFIESEEGSGRGAALVSAVACK 457
>ref|NP_277042.1| glucokinase isoform 2 [Homo sapiens].
Length = 466
Score = 231 bits (590), Expect = 5e-61
Identities = 108/218 (49%), Positives = 154/218 (70%)
Frame = +1
Query: 1 VEMLEGTEGRMCINMEWGAFGDNGCLDDIRTIYDKMVDEYSLNAGKQRYEKMISGMYLGE 180
VE++EG EGRMC+N EWGAFGD+G LD+ YD++VDE S N G+Q YEK+I G Y+GE
Sbjct: 242 VELVEGDEGRMCVNTEWGAFGDSGELDEFLLEYDRLVDESSANPGQQLYEKLIGGKYMGE 301
Query: 181 IVRNILIDFTKRGFLFRGQISEPLKTRGIFQTKYLSQIESDRLALLQVRAILQQLGLNST 360
+VR +L+ LF G+ SE L+TRG F+T+++SQ+ESD Q+ IL LGL +
Sbjct: 302 LVRLVLLRLVDENLLFHGEASEQLRTRGAFETRFVSQVESDTGDRKQIYNILSTLGLRPS 361
Query: 361 CDDSILVKTVCGVVSKRAAQLCGAGMAAVVDKIRENRGLDHLNVTVGVDGTLYKLHPHFS 540
D +V+ C VS RAA +C AG+A V++++RE+R D + +TVGVDG++YKLHP F
Sbjct: 362 TTDCDIVRRACESVSTRAAHMCSAGLAGVINRMRESRSEDVMRITVGVDGSVYKLHPSFK 421
Query: 541 RIMHQTVKELSPKCNVSFLLSEDGSGKGAALITAVGVR 654
H +V+ L+P C ++F+ SE+GSG+GAAL++AV +
Sbjct: 422 ERFHASVRRLTPSCEITFIESEEGSGRGAALVSAVACK 459
Database: RefSeq49_HP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,297,164
Number of sequences in database: 32,964
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 32964
Number of Hits to DB: 37,123,994
Number of extensions: 1053959
Number of successful extensions: 4149
Number of sequences better than 1.0e-05: 11
Number of HSP's gapped: 4135
Number of HSP's successfully gapped: 19
Length of query: 310
Length of database: 18,297,164
Length adjustment: 102
Effective length of query: 208
Effective length of database: 14,934,836
Effective search space: 3106445888
Effective search space used: 3106445888
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)
Search to Sscrofa10_2
BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-014830
(932 letters)
Database: Sscrofa_10.2.fasta
4582 sequences; 2,808,509,378 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Sscrofa_Chr14 791 0.0
Sscrofa_Chr03 706 0.0
Sscrofa_Chr02 66 4e-08
>Sscrofa_Chr14
|| Length = 153851969
Score = 791 bits (399), Expect = 0.0
Identities = 399/399 (100%)
Strand = Plus / Minus
Query: 534 cttctccagaatcatgcaccaaaccgtgaaggaactgtcaccaaagtgtaacgtgtcctt 593
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 78487809 cttctccagaatcatgcaccaaaccgtgaaggaactgtcaccaaagtgtaacgtgtcctt 78487750
Query: 594 cctcttatccgaagacggtagtggcaagggagctgccctcatcacggcagtgggcgtccg 653
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 78487749 cctcttatccgaagacggtagtggcaagggagctgccctcatcacggcagtgggcgtccg 78487690
Query: 654 gctccgagaggggagcagctaagagtcctggcccccacccccagcccgcagccctccagc 713
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 78487689 gctccgagaggggagcagctaagagtcctggcccccacccccagcccgcagccctccagc 78487630
Query: 714 acttctctcttcaagcagcgacccctgttctgtccagcgagctgtgctgggagacgccgg 773
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 78487629 acttctctcttcaagcagcgacccctgttctgtccagcgagctgtgctgggagacgccgg 78487570
Query: 774 cgccagggcccgccagcaccgccacggggaggaaggcagaagccacctaatggcgcgtaa 833
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 78487569 cgccagggcccgccagcaccgccacggggaggaaggcagaagccacctaatggcgcgtaa 78487510
Query: 834 cgtagggtaccaaatagagtgcgtgctgttgataacctctcacctccagaaccccctcac 893
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 78487509 cgtagggtaccaaatagagtgcgtgctgttgataacctctcacctccagaaccccctcac 78487450
Query: 894 ctgccctgacactttgcatgatttgatttctatcccgtc 932
|||||||||||||||||||||||||||||||||||||||
Sbjct: 78487449 ctgccctgacactttgcatgatttgatttctatcccgtc 78487411
Score = 460 bits (232), Expect = e-127
Identities = 235/236 (99%)
Strand = Plus / Minus
Query: 298 agcgaccggttagcgctgctccaggtccgggccatcctccagcagctgggcctgaacagc 357
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 78489130 agcgaccggttagcgctgctccaggtccgggccatcctccagcagctgggcctgaacagc 78489071
Query: 358 acctgcgatgacagtatcctcgtgaagaccgtgtgcggggtggtgtccaagagggcagcg 417
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 78489070 acctgcgatgacagtatcctcgtgaagaccgtgtgcggggtggtgtccaagagggcagcg 78489011
Query: 418 cagctgtgcggtgccggcatggcggccgtagtggataagatccgtgagaacagagggctg 477
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 78489010 cagctgtgcggtgccggcatggcggccgtagtggataagattcgtgagaacagagggctg 78488951
Query: 478 gaccacctcaacgtgactgtgggtgtggacgggacgctgtacaagcttcatccaca 533
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 78488950 gaccacctcaacgtgactgtgggtgtggacgggacgctgtacaagcttcatccaca 78488895
Score = 313 bits (158), Expect = 9e-83
Identities = 158/158 (100%)
Strand = Plus / Minus
Query: 142 aggtatgagaagatgatcagtggcatgtacctgggtgaaatcgtccgcaacatcttgatc 201
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 78492638 aggtatgagaagatgatcagtggcatgtacctgggtgaaatcgtccgcaacatcttgatc 78492579
Query: 202 gacttcaccaagaggggattcctcttccgggggcagatctctgagccgctgaagacgcgg 261
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 78492578 gacttcaccaagaggggattcctcttccgggggcagatctctgagccgctgaagacgcgg 78492519
Query: 262 ggcatctttcagaccaagtatctctcgcagatcgagag 299
||||||||||||||||||||||||||||||||||||||
Sbjct: 78492518 ggcatctttcagaccaagtatctctcgcagatcgagag 78492481
Score = 289 bits (146), Expect = 1e-75
Identities = 146/146 (100%)
Strand = Plus / Minus
Query: 1 gttgagatgctagaaggaactgaggggcgaatgtgtatcaacatggagtggggtgccttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 78495011 gttgagatgctagaaggaactgaggggcgaatgtgtatcaacatggagtggggtgccttt 78494952
Query: 61 ggggacaatgggtgtctggatgacatcagaacaatctatgacaaaatggtggacgaatat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 78494951 ggggacaatgggtgtctggatgacatcagaacaatctatgacaaaatggtggacgaatat 78494892
Query: 121 tctctaaacgcagggaaacaaaggta 146
||||||||||||||||||||||||||
Sbjct: 78494891 tctctaaacgcagggaaacaaaggta 78494866
>Sscrofa_Chr03
|| Length = 144787322
Score = 706 bits (356), Expect = 0.0
Identities = 780/920 (84%), Gaps = 36/920 (3%)
Strand = Plus / Minus
Query: 10 ctagaaggaactgaggggcgaatgtgtatcaacatggagtggggtgcctttggggacaat 69
|||||||||||||||||| | ||||||| |||||||||||||||||||||||||||||||
Sbjct: 128141934 ctagaaggaactgaggggtggatgtgtagcaacatggagtggggtgcctttggggacaat 128141875
Query: 70 gggtgtctggatgacatcagaacaatctatgacaaaatggtggacgaatattctctaaac 129
| |||| ||||||||||||||||||| ||||||| |||||| ||||||||| |||
Sbjct: 128141874 g--tgtccagatgacatcagaacaatctgtgacaaaccagtggacaaatattctccaaat 128141817
Query: 130 gcagggaaacaaaggtatgagaagatgatcagtggcatgtacctgggtgaaatcgtccgc 189
|| ||||||| ||||||||||||||||||||||||||||||||||||| ||||||||| |
Sbjct: 128141816 gccgggaaaccaaggtatgagaagatgatcagtggcatgtacctgggtaaaatcgtccac 128141757
Query: 190 aacatcttgatcgacttcaccaagaggggattcctcttccgggggcagatctctgagccg 249
||| |||||||| ||||||||| |||||||| ||| |||||||||||||
Sbjct: 128141756 aacgtcttgatcttcttcaccaaaaggggatttctc----------agatctctgagcca 128141707
Query: 250 ctgaagacgcggggcatctttcagaccaagtatctctcgcagatcgagagcgaccggtta 309
||||||| | ||| ||||||||||||||||||||||| |||||||| || ||| |||||
Sbjct: 128141706 ctgaagaggtgggatatctttcagaccaagtatctctctcagatcgaaagggacaggtta 128141647
Query: 310 gcgctgctccaggtccgggccatcctccagcagctgggcctgaacagcacctgcgatgac 369
|||||||| ||||| |||| ||||| ||||||||||||||||||||||||||||||||
Sbjct: 128141646 gcgctgctgcaggtatgggctgtcctctagcagctgggcctgaacagcacctgcgatgac 128141587
Query: 370 agtatcctcgtgaagaccgtgt--gcggggtggtgtccaagagggcagcgcagctgtgcg 427
||||||||||||||||| |||| ||||||||||| ||||||||| | ||||||| | |
Sbjct: 128141586 agtatcctcgtgaagactgtgtcagcggggtggtggccaagagggtggagcagctgcgtg 128141527
Query: 428 gtgccggcatggcggccgtagtggataagatccgtgagaacagagggctggaccacctca 487
| ||| || |||||||||||||||||||| |||||||| |||||||||||||| |
Sbjct: 128141526 gcatgggctcgggggccgtagtggataagatcctagagaacagggggctggaccacctga 128141467
Query: 488 acgtgactgtgggtgtggacgggacgctgtacaagcttcatccacacttctccagaatca 547
|| |||| |||||||||||||||||||| ||||||||||||| ||||||||||||||||
Sbjct: 128141466 acatgaccgtgggtgtggacgggacgctctacaagcttcatctgcacttctccagaatca 128141407
Query: 548 tgcaccaaaccgtgaaggaactgtcaccaaagtgtaacgtgtccttcctcttatccgaag 607
||||||| | ||||||||||||||||| |||||| | ||||||||||| || ||||
Sbjct: 128141406 tgcacca----gcgaaggaactgtcaccaacgtgtaaagcgtccttcctctcatgggaag 128141351
Query: 608 acggtagtggcaagggagctgccctcatcacggcagtgggcgtccggctcc---gagagg 664
||||||| ||| ||||||||| ||||||| ||| |||||||||| || || ||||||
Sbjct: 128141350 acggtagcagcaggggagctgcgctcatcaaggccgtgggcgtccagcaccggggagagg 128141291
Query: 665 ggagcagctaagagtcctggcccccacccccagcccgcagccctccagcacttctctctt 724
||||||||||||||| || | |||||||||||| ||| |||||||||||||||||
Sbjct: 128141290 caagcagctaagagtcccggac----cccccagcccgctgccttccagcacttctctctt 128141235
Query: 725 caagcagcgacccctgttctgtccagcgagctgtgctgggagacgccggcgccagggccc 784
||||||||||||| |||| | |||| ||| || |||||||||||||||
Sbjct: 128141234 caagcagcgacccacgttccgcccagggagttgcgctgggagacgccgg----------t 128141185
Query: 785 gccagcaccgccacggggaggaaggcagaagccacctaatggcgcgtaacgtagggtacc 844
||||||||| | | |||||||| |||||||||| |||| ||||||||| |||||||||
Sbjct: 128141184 gccagcacctactccgggaggaaagcagaagccagctaaaggcgcgtaagttagggtacc 128141125
Query: 845 aaatagagtgcgtgctgttgataacctctcacctccagaacccc-ctcacctgccctgac 903
|||||||||||||||||||| ||| | |||||||||||| |||| ||||||| ||||| |
Sbjct: 128141124 aaatagagtgcgtgctgttgctaatccctcacctccagaccccctctcacctaccctgcc 128141065
Query: 904 actttgcatgatttgatttc 923
||||||| ||||||||||||
Sbjct: 128141064 actttgcttgatttgatttc 128141045
Score = 81.8 bits (41), Expect = 6e-13
Identities = 101/121 (83%)
Strand = Plus / Minus
Query: 410 gggcagcgcagctgtgcggtgccggcatggcggccgtagtggataagatccgtgagaaca 469
||||||| ||||| |||||||| |||||||| ||||| ||||| || || || || |||
Sbjct: 71334597 gggcagcccagctctgcggtgcaggcatggccgccgtggtggacaaaatacgagaaaacc 71334538
Query: 470 gagggctggaccacctcaacgtgactgtgggtgtggacgggacgctgtacaagcttcatc 529
| ||||||||| |||||| ||||| ||||| ||||||||||| || |||||||| ||||
Sbjct: 71334537 gggggctggacaccctcaaagtgacggtgggcgtggacgggaccctctacaagctacatc 71334478
Query: 530 c 530
|
Sbjct: 71334477 c 71334477
Score = 77.8 bits (39), Expect = 1e-11
Identities = 57/63 (90%)
Strand = Plus / Minus
Query: 22 gaggggcgaatgtgtatcaacatggagtggggtgcctttggggacaatgggtgtctggat 81
|||||||| |||||| |||||||||||||||| ||||| ||||||||||| || ||||||
Sbjct: 71339360 gaggggcggatgtgtgtcaacatggagtggggggccttcggggacaatggatgcctggat 71339301
Query: 82 gac 84
|||
Sbjct: 71339300 gac 71339298
Score = 71.9 bits (36), Expect = 6e-10
Identities = 42/44 (95%)
Strand = Plus / Minus
Query: 22 gaggggcgaatgtgtatcaacatggagtggggtgcctttgggga 65
|||||||| ||||||||||||||||||||||| |||||||||||
Sbjct: 71353431 gaggggcgtatgtgtatcaacatggagtggggggcctttgggga 71353388
Score = 60.0 bits (30), Expect = 2e-06
Identities = 57/66 (86%)
Strand = Plus / Minus
Query: 148 gagaagatgatcagtggcatgtacctgggtgaaatcgtccgcaacatcttgatcgacttc 207
||||| |||||||| ||||||||||||||||| || || || |||||| | ||||| |||
Sbjct: 71337139 gagaaaatgatcagcggcatgtacctgggtgagattgttcgtaacatcctcatcgatttc 71337080
Query: 208 accaag 213
||||||
Sbjct: 71337079 accaag 71337074
>Sscrofa_Chr02
|| Length = 162569375
Score = 65.9 bits (33), Expect = 4e-08
Identities = 48/53 (90%)
Strand = Plus / Plus
Query: 142 aggtatgagaagatgatcagtggcatgtacctgggtgaaatcgtccgcaacat 194
|||| |||||||||||||||||||||||||||||| || || |||||| ||||
Sbjct: 82668124 aggtttgagaagatgatcagtggcatgtacctgggggagattgtccgccacat 82668176
Score = 61.9 bits (31), Expect = 6e-07
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 31 atgtgtatcaacatggagtggggtgcctttgggga 65
||||| |||||||||||||||||||||||||||||
Sbjct: 82667901 atgtgcatcaacatggagtggggtgcctttgggga 82667935
Database: Sscrofa_10.2.fasta
Posted date: Nov 16, 2011 10:34 AM
Number of letters in database: 2,808,509,378
Number of sequences in database: 4582
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4582
Number of Hits to DB: 21,899,162
Number of extensions: 189
Number of successful extensions: 189
Number of sequences better than 1.0e-05: 3
Number of HSP's gapped: 185
Number of HSP's successfully gapped: 14
Length of query: 932
Length of database: 2,808,509,378
Length adjustment: 21
Effective length of query: 911
Effective length of database: 2,808,413,156
Effective search space: 2558464385116
Effective search space used: 2558464385116
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 18 (36.2 bits)
S2: 29 (58.0 bits)