Search to RefSeqBP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-014889
(944 letters)
Database: RefSeq49_BP.fasta
33,088 sequences; 17,681,374 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001093786.1| phosphatidylinositol 4-kinase type 2-alpha [... 624 e-179
Alignment gi|NP_001095534.1| phosphatidylinositol 4-kinase type 2-beta [B... 466 e-131
>ref|NP_001093786.1| phosphatidylinositol 4-kinase type 2-alpha [Bos taurus].
Length = 479
Score = 624 bits (1608), Expect = e-179
Identities = 300/313 (95%), Positives = 304/313 (97%)
Frame = +2
Query: 5 KPKNEEPYGHLNPKWTKWLQKLCCPCCFGRDCLVLNQGYLSEAGASLVDQKLELNIVPRT 184
KPKNEEPYG LNPKWTKWLQKLCCPCCFGRDCLVLNQGYLSEAGASLVDQKLELNIVPRT
Sbjct: 152 KPKNEEPYGQLNPKWTKWLQKLCCPCCFGRDCLVLNQGYLSEAGASLVDQKLELNIVPRT 211
Query: 185 KVVYLASETFNYSAIDRVKSRGKRLALEKVPKVGQRFNRIGLPPKVGSFQLFVEGYKDAD 364
KVVYLASETFNYSAIDRVKSRGKRLALEKVPKVGQRFNRIGLPPKVGSFQLFVE YKDAD
Sbjct: 212 KVVYLASETFNYSAIDRVKSRGKRLALEKVPKVGQRFNRIGLPPKVGSFQLFVESYKDAD 271
Query: 365 FWLRRFETEPLPENTNRQLLLQFERLVVLDYIIRNTDRGNDNWLIKYDCPMDSSSSRDTD 544
+WLRRFE EPLPENTNRQLLLQFERLVVLDYIIRNTDRGNDNWLIKYDCPMDSS+SRDTD
Sbjct: 272 YWLRRFEAEPLPENTNRQLLLQFERLVVLDYIIRNTDRGNDNWLIKYDCPMDSSNSRDTD 331
Query: 545 WVVVKEPVIKVAAIDNGLAFPLKHPDSWRAYPFYWAWLPQAKVPFSQEIKDLILPKISDP 724
WVVVKEPVIKVAAIDNGLAFPLKHPDSWRAYPFYWAWLPQAKVPFSQEIKDLILPKISDP
Sbjct: 332 WVVVKEPVIKVAAIDNGLAFPLKHPDSWRAYPFYWAWLPQAKVPFSQEIKDLILPKISDP 391
Query: 725 NFVKDLEEDLYELFKKDPGFDRGQFHKQIVVMRGQILNLSQALKDNKSPLHLVQMPPVIV 904
NFVKDLEEDLYELFKKDPGFDRGQFHKQI VMRGQILNL+QALKDNK PLHLVQMPPVIV
Sbjct: 392 NFVKDLEEDLYELFKKDPGFDRGQFHKQIAVMRGQILNLTQALKDNKCPLHLVQMPPVIV 451
Query: 905 ETARFPPASASES 943
ETAR S+SES
Sbjct: 452 ETARSHQRSSSES 464
>ref|NP_001095534.1| phosphatidylinositol 4-kinase type 2-beta [Bos taurus].
Length = 487
Score = 466 bits (1200), Expect = e-131
Identities = 218/304 (71%), Positives = 256/304 (84%)
Frame = +2
Query: 5 KPKNEEPYGHLNPKWTKWLQKLCCPCCFGRDCLVLNQGYLSEAGASLVDQKLELNIVPRT 184
KPK+EEPYGHLNPKWTK++ K+CCPCCFGR CL+ NQGYLSEAGA LVD+KL L IVP+T
Sbjct: 156 KPKSEEPYGHLNPKWTKYVHKVCCPCCFGRGCLLPNQGYLSEAGAYLVDEKLHLGIVPKT 215
Query: 185 KVVYLASETFNYSAIDRVKSRGKRLALEKVPKVGQRFNRIGLPPKVGSFQLFVEGYKDAD 364
+VV+L ETFNYSAIDR KSRGK+ ALEKVPKVG++F+RIGLPPK+GSFQLFVEGYK+A+
Sbjct: 216 RVVWLVRETFNYSAIDRAKSRGKKYALEKVPKVGRKFHRIGLPPKIGSFQLFVEGYKEAE 275
Query: 365 FWLRRFETEPLPENTNRQLLLQFERLVVLDYIIRNTDRGNDNWLIKYDCPMDSSSSRDTD 544
+WLR+FE +PLPEN +Q QFERLVVLDYIIRNTDRGNDNWLI+ + DT
Sbjct: 276 YWLRKFEADPLPENIRKQFQSQFERLVVLDYIIRNTDRGNDNWLIRCEKQTHEDEITDTK 335
Query: 545 WVVVKEPVIKVAAIDNGLAFPLKHPDSWRAYPFYWAWLPQAKVPFSQEIKDLILPKISDP 724
W KE +IK+AAIDNGLAFP KHPD WRAYPF+WAWLPQAKVPFS+EIK+L+LP ISD
Sbjct: 336 WTDDKETLIKIAAIDNGLAFPFKHPDEWRAYPFHWAWLPQAKVPFSEEIKNLVLPYISDM 395
Query: 725 NFVKDLEEDLYELFKKDPGFDRGQFHKQIVVMRGQILNLSQALKDNKSPLHLVQMPPVIV 904
NFV+DL EDL ELFK D FD+ F KQ+ VMRGQILNL+QAL+D K+P+ LVQMP V+V
Sbjct: 396 NFVQDLCEDLCELFKMDRNFDKATFEKQMSVMRGQILNLTQALRDKKTPVQLVQMPCVVV 455
Query: 905 ETAR 916
E ++
Sbjct: 456 ERSQ 459
Database: RefSeq49_BP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 17,681,374
Number of sequences in database: 33,088
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33088
Number of Hits to DB: 35,926,850
Number of extensions: 996305
Number of successful extensions: 3428
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 3422
Number of HSP's successfully gapped: 2
Length of query: 314
Length of database: 17,681,374
Length adjustment: 102
Effective length of query: 212
Effective length of database: 14,306,398
Effective search space: 3032956376
Effective search space used: 3032956376
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)
Animal-Genome cDNA 20110601C-014889
Search to RefSeqCP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-014889
(944 letters)
Database: RefSeq49_CP.fasta
33,336 sequences; 18,874,504 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_543953.2| PREDICTED: similar to phosphatidylinositol 4-ki... 631 0.0
>ref|XP_543953.2| PREDICTED: similar to phosphatidylinositol 4-kinase type II [Canis
familiaris].
Length = 484
Score = 631 bits (1627), Expect = 0.0
Identities = 303/313 (96%), Positives = 307/313 (98%)
Frame = +2
Query: 5 KPKNEEPYGHLNPKWTKWLQKLCCPCCFGRDCLVLNQGYLSEAGASLVDQKLELNIVPRT 184
KPKNEEPYGHLNPKWTKWLQKLCCPCCFGRDCLVLNQGYLSEAGASLVDQKLELNIVPRT
Sbjct: 157 KPKNEEPYGHLNPKWTKWLQKLCCPCCFGRDCLVLNQGYLSEAGASLVDQKLELNIVPRT 216
Query: 185 KVVYLASETFNYSAIDRVKSRGKRLALEKVPKVGQRFNRIGLPPKVGSFQLFVEGYKDAD 364
KVVYLAS+TFNYSAIDRVKSRGKRLALEKVPKVGQRFNRIGLPPKVGSFQLFVEGYKDAD
Sbjct: 217 KVVYLASDTFNYSAIDRVKSRGKRLALEKVPKVGQRFNRIGLPPKVGSFQLFVEGYKDAD 276
Query: 365 FWLRRFETEPLPENTNRQLLLQFERLVVLDYIIRNTDRGNDNWLIKYDCPMDSSSSRDTD 544
+WLRRFE EPLPENTNRQLLLQFERLVVLDYIIRNTDRGNDNWLIKYDCPMDSSSSRDTD
Sbjct: 277 YWLRRFEAEPLPENTNRQLLLQFERLVVLDYIIRNTDRGNDNWLIKYDCPMDSSSSRDTD 336
Query: 545 WVVVKEPVIKVAAIDNGLAFPLKHPDSWRAYPFYWAWLPQAKVPFSQEIKDLILPKISDP 724
WVVVKEPVIKVAAIDNGLAFPLKHPDSWRAYPFYWAWLPQAKVPFSQEIKDLILPKISDP
Sbjct: 337 WVVVKEPVIKVAAIDNGLAFPLKHPDSWRAYPFYWAWLPQAKVPFSQEIKDLILPKISDP 396
Query: 725 NFVKDLEEDLYELFKKDPGFDRGQFHKQIVVMRGQILNLSQALKDNKSPLHLVQMPPVIV 904
NFVKDLEEDLYELFKKDPGFDRGQFHKQI VMRGQILNL+QALKDNKSPLHLVQMPPVIV
Sbjct: 397 NFVKDLEEDLYELFKKDPGFDRGQFHKQIAVMRGQILNLTQALKDNKSPLHLVQMPPVIV 456
Query: 905 ETARFPPASASES 943
ETAR S+SES
Sbjct: 457 ETARSHQRSSSES 469
Database: RefSeq49_CP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,874,504
Number of sequences in database: 33,336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33336
Number of Hits to DB: 37,631,880
Number of extensions: 1034801
Number of successful extensions: 3497
Number of sequences better than 1.0e-05: 1
Number of HSP's gapped: 3497
Number of HSP's successfully gapped: 1
Length of query: 314
Length of database: 18,874,504
Length adjustment: 103
Effective length of query: 211
Effective length of database: 15,440,896
Effective search space: 3258029056
Effective search space used: 3258029056
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)
Search to RefSeqSP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-014889
(944 letters)
Database: RefSeq49_SP.fasta
24,897 sequences; 11,343,932 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_001929069.1| PREDICTED: phosphatidylinositol 4-kinase typ... 635 0.0
Alignment gi|XP_003361107.1| PREDICTED: phosphatidylinositol 4-kinase typ... 469 e-133
>ref|XP_001929069.1| PREDICTED: phosphatidylinositol 4-kinase type 2-alpha [Sus scrofa].
Length = 479
Score = 635 bits (1639), Expect = 0.0
Identities = 307/313 (98%), Positives = 307/313 (98%)
Frame = +2
Query: 5 KPKNEEPYGHLNPKWTKWLQKLCCPCCFGRDCLVLNQGYLSEAGASLVDQKLELNIVPRT 184
KPKNEEPYGHLNPKWTKWLQKLCCPCCFGRDCLVLNQGYLSEAGASLVDQKLELNIVPRT
Sbjct: 152 KPKNEEPYGHLNPKWTKWLQKLCCPCCFGRDCLVLNQGYLSEAGASLVDQKLELNIVPRT 211
Query: 185 KVVYLASETFNYSAIDRVKSRGKRLALEKVPKVGQRFNRIGLPPKVGSFQLFVEGYKDAD 364
KVVYLASETFNYSAIDRVKSRGKRLALEKVPKVGQRFNRIGLPPKVGSFQLFVEGYKDAD
Sbjct: 212 KVVYLASETFNYSAIDRVKSRGKRLALEKVPKVGQRFNRIGLPPKVGSFQLFVEGYKDAD 271
Query: 365 FWLRRFETEPLPENTNRQLLLQFERLVVLDYIIRNTDRGNDNWLIKYDCPMDSSSSRDTD 544
FWLRRFE EPLPENTNRQLLLQFERLVVLDYIIRNTDRGNDNWLIKYDCPMDSSSSRDTD
Sbjct: 272 FWLRRFEAEPLPENTNRQLLLQFERLVVLDYIIRNTDRGNDNWLIKYDCPMDSSSSRDTD 331
Query: 545 WVVVKEPVIKVAAIDNGLAFPLKHPDSWRAYPFYWAWLPQAKVPFSQEIKDLILPKISDP 724
WVVVKEPVIKVAAIDNGLAFPLKHPDSWRAYPFYWAWLPQAKVPFSQEIKDLILPKISDP
Sbjct: 332 WVVVKEPVIKVAAIDNGLAFPLKHPDSWRAYPFYWAWLPQAKVPFSQEIKDLILPKISDP 391
Query: 725 NFVKDLEEDLYELFKKDPGFDRGQFHKQIVVMRGQILNLSQALKDNKSPLHLVQMPPVIV 904
NFVKDLEEDLYELFKKDPGFDRGQFHKQI VMRGQILNLSQALKDNKSPLHLVQMPPVIV
Sbjct: 392 NFVKDLEEDLYELFKKDPGFDRGQFHKQIAVMRGQILNLSQALKDNKSPLHLVQMPPVIV 451
Query: 905 ETARFPPASASES 943
ETAR SASES
Sbjct: 452 ETARSHQRSASES 464
>ref|XP_003361107.1| PREDICTED: phosphatidylinositol 4-kinase type 2-beta [Sus scrofa].
Length = 414
Score = 469 bits (1208), Expect = e-133
Identities = 219/305 (71%), Positives = 260/305 (85%), Gaps = 1/305 (0%)
Frame = +2
Query: 5 KPKNEEPYGHLNPKWTKWLQKLCCPCCFGRDCLVLNQGYLSEAGASLVDQKLELNIVPRT 184
KPK+EEPYG LNPKWTK++ K+CCPCCFGR CL+ NQGYLSEAGASLVD+KL L+IVP+T
Sbjct: 82 KPKSEEPYGQLNPKWTKYVHKVCCPCCFGRGCLLPNQGYLSEAGASLVDEKLHLDIVPKT 141
Query: 185 KVVYLASETFNYSAIDRVKSRGKRLALEKVPKVGQRFNRIGLPPKVGSFQLFVEGYKDAD 364
+VV+L SETFNYSAIDR KSRGK+ ALEKVPKVG++F+R+GLPPK+GSFQLFVEGYK+A+
Sbjct: 142 RVVWLVSETFNYSAIDRAKSRGKKYALEKVPKVGRKFHRVGLPPKIGSFQLFVEGYKEAE 201
Query: 365 FWLRRFETEPLPENTNRQLLLQFERLVVLDYIIRNTDRGNDNWLIKYDCPMDSSSSRDTD 544
+WLR+FE +PLPEN +Q QFERLV+LDYIIRNTDRGNDNWLIKY+ ++
Sbjct: 202 YWLRKFEADPLPENIRKQFQSQFERLVILDYIIRNTDRGNDNWLIKYEKKKQEKEIKEAK 261
Query: 545 WV-VVKEPVIKVAAIDNGLAFPLKHPDSWRAYPFYWAWLPQAKVPFSQEIKDLILPKISD 721
W V KE +IK+AAIDNGLAFP KHPD WRAYPF+WAWLPQAKVPFS EI++L+LP ISD
Sbjct: 262 WTNVDKESLIKIAAIDNGLAFPFKHPDEWRAYPFHWAWLPQAKVPFSDEIRNLVLPYISD 321
Query: 722 PNFVKDLEEDLYELFKKDPGFDRGQFHKQIVVMRGQILNLSQALKDNKSPLHLVQMPPVI 901
NFV+DL EDLYELFK D FD+ F +Q+ VMRGQILNL+QAL+D KSP+ LVQMP VI
Sbjct: 322 MNFVQDLCEDLYELFKTDKRFDKATFERQMSVMRGQILNLTQALRDRKSPVQLVQMPCVI 381
Query: 902 VETAR 916
VE ++
Sbjct: 382 VERSQ 386
Database: RefSeq49_SP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 11,343,932
Number of sequences in database: 24,897
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 24897
Number of Hits to DB: 23,186,958
Number of extensions: 642237
Number of successful extensions: 2177
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 2173
Number of HSP's successfully gapped: 2
Length of query: 314
Length of database: 11,343,932
Length adjustment: 99
Effective length of query: 215
Effective length of database: 8,879,129
Effective search space: 1909012735
Effective search space used: 1909012735
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 33 (17.3 bits)
Search to RefSeqMP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-014889
(944 letters)
Database: RefSeq49_MP.fasta
30,036 sequences; 15,617,559 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_663476.1| phosphatidylinositol 4-kinase type 2-alpha [Mus... 626 e-180
Alignment gi|NP_080227.2| phosphatidylinositol 4-kinase type 2-beta isofo... 464 e-131
Alignment gi|NP_083020.2| phosphatidylinositol 4-kinase type 2-beta isofo... 464 e-131
>ref|NP_663476.1| phosphatidylinositol 4-kinase type 2-alpha [Mus musculus].
Length = 479
Score = 626 bits (1615), Expect = e-180
Identities = 299/313 (95%), Positives = 306/313 (97%)
Frame = +2
Query: 5 KPKNEEPYGHLNPKWTKWLQKLCCPCCFGRDCLVLNQGYLSEAGASLVDQKLELNIVPRT 184
KPKNEEPYGHLNPKWTKWLQKLCCPCCFGRDCLVLNQGYLSEAGASLVDQKLELNIVPRT
Sbjct: 152 KPKNEEPYGHLNPKWTKWLQKLCCPCCFGRDCLVLNQGYLSEAGASLVDQKLELNIVPRT 211
Query: 185 KVVYLASETFNYSAIDRVKSRGKRLALEKVPKVGQRFNRIGLPPKVGSFQLFVEGYKDAD 364
KVVYLASETFNYSAIDRVKSRGKRLALEKVPKVGQRFNRIGLPPKVGSFQLFVEGYKDAD
Sbjct: 212 KVVYLASETFNYSAIDRVKSRGKRLALEKVPKVGQRFNRIGLPPKVGSFQLFVEGYKDAD 271
Query: 365 FWLRRFETEPLPENTNRQLLLQFERLVVLDYIIRNTDRGNDNWLIKYDCPMDSSSSRDTD 544
+WLRRFE EPLPENTNRQLLLQFERLVVLDYIIRNTDRGNDNWLIKYDCPMD+SS RDTD
Sbjct: 272 YWLRRFEAEPLPENTNRQLLLQFERLVVLDYIIRNTDRGNDNWLIKYDCPMDNSSCRDTD 331
Query: 545 WVVVKEPVIKVAAIDNGLAFPLKHPDSWRAYPFYWAWLPQAKVPFSQEIKDLILPKISDP 724
WV+V+EPVIKVAAIDNGLAFPLKHPDSWRAYPFYWAWLPQAKVPFSQEIKDLILPKISDP
Sbjct: 332 WVMVREPVIKVAAIDNGLAFPLKHPDSWRAYPFYWAWLPQAKVPFSQEIKDLILPKISDP 391
Query: 725 NFVKDLEEDLYELFKKDPGFDRGQFHKQIVVMRGQILNLSQALKDNKSPLHLVQMPPVIV 904
NF+KDLEEDLYELFK+DPGFDRGQFHKQI VMRGQILNL+QALKDNKSPLHLVQMPPVIV
Sbjct: 392 NFIKDLEEDLYELFKRDPGFDRGQFHKQIAVMRGQILNLTQALKDNKSPLHLVQMPPVIV 451
Query: 905 ETARFPPASASES 943
ETAR SASES
Sbjct: 452 ETARSHQRSASES 464
>ref|NP_080227.2| phosphatidylinositol 4-kinase type 2-beta isoform 1 [Mus musculus].
Length = 469
Score = 464 bits (1195), Expect = e-131
Identities = 220/306 (71%), Positives = 258/306 (84%), Gaps = 2/306 (0%)
Frame = +2
Query: 5 KPKNEEPYGHLNPKWTKWLQKLCCPCCFGRDCLVLNQGYLSEAGASLVDQKLELNIVPRT 184
KPK+EEPYG LNPKWTK++ K+CCPCCFGR CL+ NQGYLSEAGA LVD KL L IVP+T
Sbjct: 136 KPKSEEPYGQLNPKWTKYVHKVCCPCCFGRGCLLPNQGYLSEAGAYLVDVKLNLGIVPKT 195
Query: 185 KVVYLASETFNYSAIDRVKSRGKRLALEKVPKVGQRFNRIGLPPKVGSFQLFVEGYKDAD 364
KVV+L SETFNYSAIDR KSRGK+ ALEKVPKVG++F+RIGLPPKVGSFQLFV+ YK+A+
Sbjct: 196 KVVWLVSETFNYSAIDRAKSRGKKYALEKVPKVGRKFHRIGLPPKVGSFQLFVKDYKEAE 255
Query: 365 FWLRRFETEPLPENTNRQLLLQFERLVVLDYIIRNTDRGNDNWLIKYDCPMDSS--SSRD 538
+WLRRFE EPLPEN +Q QFE+LV+LDYIIRNTDRGNDNWL+KYD + S +
Sbjct: 256 YWLRRFEAEPLPENIRKQFQSQFEKLVILDYIIRNTDRGNDNWLVKYDEMKYAKKIESEE 315
Query: 539 TDWVVVKEPVIKVAAIDNGLAFPLKHPDSWRAYPFYWAWLPQAKVPFSQEIKDLILPKIS 718
++W+ K+ +IK+AAIDNGLAFP KHPD WRAYPF+WAWLPQAKVPFS+E ++LILP IS
Sbjct: 316 SNWIDNKQLLIKIAAIDNGLAFPFKHPDEWRAYPFHWAWLPQAKVPFSEETRNLILPYIS 375
Query: 719 DPNFVKDLEEDLYELFKKDPGFDRGQFHKQIVVMRGQILNLSQALKDNKSPLHLVQMPPV 898
D NFV+DL EDLYELFK D GFDR F Q+ VMRGQILNL+QAL+D KSP+ L QMP V
Sbjct: 376 DMNFVQDLCEDLYELFKTDKGFDRAAFENQMSVMRGQILNLTQALRDGKSPMQLAQMPCV 435
Query: 899 IVETAR 916
IVE ++
Sbjct: 436 IVECSK 441
>ref|NP_083020.2| phosphatidylinositol 4-kinase type 2-beta isoform 2 [Mus musculus].
Length = 446
Score = 464 bits (1195), Expect = e-131
Identities = 220/306 (71%), Positives = 258/306 (84%), Gaps = 2/306 (0%)
Frame = +2
Query: 5 KPKNEEPYGHLNPKWTKWLQKLCCPCCFGRDCLVLNQGYLSEAGASLVDQKLELNIVPRT 184
KPK+EEPYG LNPKWTK++ K+CCPCCFGR CL+ NQGYLSEAGA LVD KL L IVP+T
Sbjct: 113 KPKSEEPYGQLNPKWTKYVHKVCCPCCFGRGCLLPNQGYLSEAGAYLVDVKLNLGIVPKT 172
Query: 185 KVVYLASETFNYSAIDRVKSRGKRLALEKVPKVGQRFNRIGLPPKVGSFQLFVEGYKDAD 364
KVV+L SETFNYSAIDR KSRGK+ ALEKVPKVG++F+RIGLPPKVGSFQLFV+ YK+A+
Sbjct: 173 KVVWLVSETFNYSAIDRAKSRGKKYALEKVPKVGRKFHRIGLPPKVGSFQLFVKDYKEAE 232
Query: 365 FWLRRFETEPLPENTNRQLLLQFERLVVLDYIIRNTDRGNDNWLIKYDCPMDSS--SSRD 538
+WLRRFE EPLPEN +Q QFE+LV+LDYIIRNTDRGNDNWL+KYD + S +
Sbjct: 233 YWLRRFEAEPLPENIRKQFQSQFEKLVILDYIIRNTDRGNDNWLVKYDEMKYAKKIESEE 292
Query: 539 TDWVVVKEPVIKVAAIDNGLAFPLKHPDSWRAYPFYWAWLPQAKVPFSQEIKDLILPKIS 718
++W+ K+ +IK+AAIDNGLAFP KHPD WRAYPF+WAWLPQAKVPFS+E ++LILP IS
Sbjct: 293 SNWIDNKQLLIKIAAIDNGLAFPFKHPDEWRAYPFHWAWLPQAKVPFSEETRNLILPYIS 352
Query: 719 DPNFVKDLEEDLYELFKKDPGFDRGQFHKQIVVMRGQILNLSQALKDNKSPLHLVQMPPV 898
D NFV+DL EDLYELFK D GFDR F Q+ VMRGQILNL+QAL+D KSP+ L QMP V
Sbjct: 353 DMNFVQDLCEDLYELFKTDKGFDRAAFENQMSVMRGQILNLTQALRDGKSPMQLAQMPCV 412
Query: 899 IVETAR 916
IVE ++
Sbjct: 413 IVECSK 418
Database: RefSeq49_MP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 15,617,559
Number of sequences in database: 30,036
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 30036
Number of Hits to DB: 31,133,133
Number of extensions: 846162
Number of successful extensions: 2863
Number of sequences better than 1.0e-05: 3
Number of HSP's gapped: 2859
Number of HSP's successfully gapped: 3
Length of query: 314
Length of database: 15,617,559
Length adjustment: 101
Effective length of query: 213
Effective length of database: 12,583,923
Effective search space: 2680375599
Effective search space used: 2680375599
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)
Search to RefSeqHP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-014889
(944 letters)
Database: RefSeq49_HP.fasta
32,964 sequences; 18,297,164 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_060895.1| phosphatidylinositol 4-kinase type 2-alpha [Hom... 632 0.0
Alignment gi|NP_060793.2| phosphatidylinositol 4-kinase type 2-beta [Homo... 463 e-131
>ref|NP_060895.1| phosphatidylinositol 4-kinase type 2-alpha [Homo sapiens].
Length = 479
Score = 632 bits (1630), Expect = 0.0
Identities = 304/313 (97%), Positives = 307/313 (98%)
Frame = +2
Query: 5 KPKNEEPYGHLNPKWTKWLQKLCCPCCFGRDCLVLNQGYLSEAGASLVDQKLELNIVPRT 184
KPKNEEPYGHLNPKWTKWLQKLCCPCCFGRDCLVLNQGYLSEAGASLVDQKLELNIVPRT
Sbjct: 152 KPKNEEPYGHLNPKWTKWLQKLCCPCCFGRDCLVLNQGYLSEAGASLVDQKLELNIVPRT 211
Query: 185 KVVYLASETFNYSAIDRVKSRGKRLALEKVPKVGQRFNRIGLPPKVGSFQLFVEGYKDAD 364
KVVYLASETFNYSAIDRVKSRGKRLALEKVPKVGQRFNRIGLPPKVGSFQLFVEGYKDAD
Sbjct: 212 KVVYLASETFNYSAIDRVKSRGKRLALEKVPKVGQRFNRIGLPPKVGSFQLFVEGYKDAD 271
Query: 365 FWLRRFETEPLPENTNRQLLLQFERLVVLDYIIRNTDRGNDNWLIKYDCPMDSSSSRDTD 544
+WLRRFE EPLPENTNRQLLLQFERLVVLDYIIRNTDRGNDNWLIKYDCPMDSSSSRDTD
Sbjct: 272 YWLRRFEAEPLPENTNRQLLLQFERLVVLDYIIRNTDRGNDNWLIKYDCPMDSSSSRDTD 331
Query: 545 WVVVKEPVIKVAAIDNGLAFPLKHPDSWRAYPFYWAWLPQAKVPFSQEIKDLILPKISDP 724
WVVVKEPVIKVAAIDNGLAFPLKHPDSWRAYPFYWAWLPQAKVPFSQEIKDLILPKISDP
Sbjct: 332 WVVVKEPVIKVAAIDNGLAFPLKHPDSWRAYPFYWAWLPQAKVPFSQEIKDLILPKISDP 391
Query: 725 NFVKDLEEDLYELFKKDPGFDRGQFHKQIVVMRGQILNLSQALKDNKSPLHLVQMPPVIV 904
NFVKDLEEDLYELFKKDPGFDRGQFHKQI VMRGQILNL+QALKDNKSPLHLVQMPPVIV
Sbjct: 392 NFVKDLEEDLYELFKKDPGFDRGQFHKQIAVMRGQILNLTQALKDNKSPLHLVQMPPVIV 451
Query: 905 ETARFPPASASES 943
ETAR S+SES
Sbjct: 452 ETARSHQRSSSES 464
>ref|NP_060793.2| phosphatidylinositol 4-kinase type 2-beta [Homo sapiens].
Length = 481
Score = 463 bits (1192), Expect = e-131
Identities = 217/307 (70%), Positives = 261/307 (85%), Gaps = 3/307 (0%)
Frame = +2
Query: 5 KPKNEEPYGHLNPKWTKWLQKLCCPCCFGRDCLVLNQGYLSEAGASLVDQKLELNIVPRT 184
KPK+EEPYG LNPKWTK++ K+CCPCCFGR CL+ NQGYLSEAGA LVD KL L+IVP+T
Sbjct: 148 KPKSEEPYGQLNPKWTKYVHKVCCPCCFGRGCLIPNQGYLSEAGAYLVDNKLHLSIVPKT 207
Query: 185 KVVYLASETFNYSAIDRVKSRGKRLALEKVPKVGQRFNRIGLPPKVGSFQLFVEGYKDAD 364
KVV+L SETFNY+AIDR KSRGK+ ALEKVPKVG++F+RIGLPPK+GSFQLFVEGYK+A+
Sbjct: 208 KVVWLVSETFNYNAIDRAKSRGKKYALEKVPKVGRKFHRIGLPPKIGSFQLFVEGYKEAE 267
Query: 365 FWLRRFETEPLPENTNRQLLLQFERLVVLDYIIRNTDRGNDNWLIKYD---CPMDSSSSR 535
+WLR+FE +PLPEN +Q QFERLV+LDYIIRNTDRGNDNWL++Y+ C + +
Sbjct: 268 YWLRKFEADPLPENIRKQFQSQFERLVILDYIIRNTDRGNDNWLVRYEKQKCEKE-IDHK 326
Query: 536 DTDWVVVKEPVIKVAAIDNGLAFPLKHPDSWRAYPFYWAWLPQAKVPFSQEIKDLILPKI 715
++ W+ +E +IK+AAIDNGLAFP KHPD WRAYPF+WAWLPQAKVPFS+EI++LILP I
Sbjct: 327 ESKWIDDEEFLIKIAAIDNGLAFPFKHPDEWRAYPFHWAWLPQAKVPFSEEIRNLILPYI 386
Query: 716 SDPNFVKDLEEDLYELFKKDPGFDRGQFHKQIVVMRGQILNLSQALKDNKSPLHLVQMPP 895
SD NFV+DL EDLYELFK D GFD+ F Q+ VMRGQILNL+QAL+D KSP LVQ+P
Sbjct: 387 SDMNFVQDLCEDLYELFKTDKGFDKATFESQMSVMRGQILNLTQALRDGKSPFQLVQIPC 446
Query: 896 VIVETAR 916
VIVE ++
Sbjct: 447 VIVERSQ 453
Database: RefSeq49_HP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,297,164
Number of sequences in database: 32,964
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 32964
Number of Hits to DB: 36,830,645
Number of extensions: 1014549
Number of successful extensions: 3594
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 3590
Number of HSP's successfully gapped: 2
Length of query: 314
Length of database: 18,297,164
Length adjustment: 102
Effective length of query: 212
Effective length of database: 14,934,836
Effective search space: 3166185232
Effective search space used: 3166185232
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)
Search to Sscrofa10_2
BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-014889
(944 letters)
Database: Sscrofa_10.2.fasta
4582 sequences; 2,808,509,378 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Sscrofa_Chr14 371 e-100
>Sscrofa_Chr14
|| Length = 153851969
Score = 371 bits (187), Expect = e-100
Identities = 187/187 (100%)
Strand = Plus / Plus
Query: 3 ttaaacccaagaatgaagagccatatgggcaccttaatcctaagtggaccaagtggctac 62
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118521289 ttaaacccaagaatgaagagccatatgggcaccttaatcctaagtggaccaagtggctac 118521348
Query: 63 agaagctgtgctgtccttgctgcttcggccgtgattgccttgtcctcaaccagggctatc 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118521349 agaagctgtgctgtccttgctgcttcggccgtgattgccttgtcctcaaccagggctatc 118521408
Query: 123 tctcagaggcaggggccagcctggtggaccaaaaactggaactcaacattgtaccccgta 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118521409 tctcagaggcaggggccagcctggtggaccaaaaactggaactcaacattgtaccccgta 118521468
Query: 183 cgaaggt 189
|||||||
Sbjct: 118521469 cgaaggt 118521475
Score = 301 bits (152), Expect = 4e-79
Identities = 155/156 (99%)
Strand = Plus / Plus
Query: 318 aggttggttcattccagctctttgttgaaggctacaaagatgcagacttctggctaaggc 377
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118528651 aggttggttcattccagctctttgttgaaggctacaaagatgcagacttctggctaaggc 118528710
Query: 378 gttttgaaacagaacctctccctgagaacactaaccggcaactactgctgcagtttgagc 437
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118528711 gttttgaagcagaacctctccctgagaacactaaccggcaactactgctgcagtttgagc 118528770
Query: 438 ggctggtggtgctggattacatcatccgcaacactg 473
||||||||||||||||||||||||||||||||||||
Sbjct: 118528771 ggctggtggtgctggattacatcatccgcaacactg 118528806
Score = 270 bits (136), Expect = 1e-69
Identities = 136/136 (100%)
Strand = Plus / Plus
Query: 186 aggtagtatacctggccagtgagaccttcaactatagtgccattgaccgagtgaagtcca 245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118528149 aggtagtatacctggccagtgagaccttcaactatagtgccattgaccgagtgaagtcca 118528208
Query: 246 ggggcaagcggcttgcactcgagaaagtgccaaaagttgggcagcggtttaaccgaattg 305
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118528209 ggggcaagcggcttgcactcgagaaagtgccaaaagttgggcagcggtttaaccgaattg 118528268
Query: 306 ggctaccaccaaaggt 321
||||||||||||||||
Sbjct: 118528269 ggctaccaccaaaggt 118528284
Score = 266 bits (134), Expect = 2e-68
Identities = 134/134 (100%)
Strand = Plus / Plus
Query: 636 atcctttttactgggcctggttgccccaggcaaaagtcccattctctcaggagatcaaag 695
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118538568 atcctttttactgggcctggttgccccaggcaaaagtcccattctctcaggagatcaaag 118538627
Query: 696 atctgattcttccaaagatatcggaccctaatttcgtcaaggacttggaggaggacctat 755
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118538628 atctgattcttccaaagatatcggaccctaatttcgtcaaggacttggaggaggacctat 118538687
Query: 756 atgaactcttcaag 769
||||||||||||||
Sbjct: 118538688 atgaactcttcaag 118538701
Score = 206 bits (104), Expect = 2e-50
Identities = 118/120 (98%), Gaps = 2/120 (1%)
Strand = Plus / Plus
Query: 826 gcagatcctaaatctgagccaggctctgaaagacaacaagagtcccctgcacctcgtcca 885
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118544781 gcagatcctaaatctgagccaggctctgaaagacaacaagagtcccctgcacctcgtcca 118544840
Query: 886 gatgccacctgtgattgtcgagacggcccgtttcccaccagc-gtctgctagcgagtcct 944
|||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||
Sbjct: 118544841 gatgccacctgtgattgtcgagacggcccg-ttcccaccagcggtctgctagcgagtcct 118544899
Score = 200 bits (101), Expect = 1e-48
Identities = 101/101 (100%)
Strand = Plus / Plus
Query: 535 ggacacagactgggtggtggtgaaggagcctgttatcaaggtggctgccatagacaatgg 594
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118537487 ggacacagactgggtggtggtgaaggagcctgttatcaaggtggctgccatagacaatgg 118537546
Query: 595 gctggctttccccctgaagcatcctgactcctggagggcat 635
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 118537547 gctggctttccccctgaagcatcctgactcctggagggcat 118537587
Score = 127 bits (64), Expect = 1e-26
Identities = 64/64 (100%)
Strand = Plus / Plus
Query: 473 gatcgaggcaatgacaactggctgattaaatatgactgtccaatggatagttctagctct 532
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118534793 gatcgaggcaatgacaactggctgattaaatatgactgtccaatggatagttctagctct 118534852
Query: 533 cggg 536
||||
Sbjct: 118534853 cggg 118534856
Score = 115 bits (58), Expect = 5e-23
Identities = 61/62 (98%)
Strand = Plus / Plus
Query: 768 agaaagatcccggtttcgataggggccagttccataagcagattgtcgtcatgcgggggc 827
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 118539185 agaaagatcccggtttcgataggggccagttccataagcagattgccgtcatgcgggggc 118539244
Query: 828 ag 829
||
Sbjct: 118539245 ag 118539246
Database: Sscrofa_10.2.fasta
Posted date: Nov 16, 2011 10:34 AM
Number of letters in database: 2,808,509,378
Number of sequences in database: 4582
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4582
Number of Hits to DB: 24,374,193
Number of extensions: 130
Number of successful extensions: 130
Number of sequences better than 1.0e-05: 1
Number of HSP's gapped: 130
Number of HSP's successfully gapped: 8
Length of query: 944
Length of database: 2,808,509,378
Length adjustment: 21
Effective length of query: 923
Effective length of database: 2,808,413,156
Effective search space: 2592165342988
Effective search space used: 2592165342988
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 18 (36.2 bits)
S2: 29 (58.0 bits)