Search to RefSeqBP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-015191
(898 letters)
Database: RefSeq49_BP.fasta
33,088 sequences; 17,681,374 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001068954.1| nicotinamide mononucleotide adenylyltransfer... 497 e-141
Alignment gi|NP_001069302.1| nicotinamide mononucleotide adenylyltransfer... 158 5e-39
Alignment gi|XP_002705487.1| PREDICTED: nicotinamide mononucleotide adeny... 145 6e-35
Alignment gi|XP_002689422.1| PREDICTED: nicotinamide mononucleotide adeny... 142 3e-34
Alignment gi|XP_002685113.1| PREDICTED: nicotinamide mononucleotide adeny... 89 5e-18
Alignment gi|XP_596322.3| PREDICTED: nicotinamide mononucleotide adenylyl... 88 1e-17
>ref|NP_001068954.1| nicotinamide mononucleotide adenylyltransferase 2 [Bos taurus].
Length = 307
Score = 497 bits (1279), Expect = e-141
Identities = 239/253 (94%), Positives = 242/253 (95%)
Frame = +3
Query: 138 MTETTKTHVILLACGSFNPITKGHIQMFERARDYLHKTGRFIVIGGIVSPVHDSYGKQGL 317
MTETTKTHVILLACGSFNPITKGHIQMFERARDYLHKTGRFIVIGGIVSPVHDSYGKQGL
Sbjct: 1 MTETTKTHVILLACGSFNPITKGHIQMFERARDYLHKTGRFIVIGGIVSPVHDSYGKQGL 60
Query: 318 VSSRHRLIMCQLAVQNSDWIRVDPWECYQDTWQTTCSVLEHHRDLMKRVTGCILSNVNTP 497
VSSRHRLIMCQLAVQNSDWIRVDPWECYQDTWQTTCSVLEHHRDLMKRVTGCILSNVNTP
Sbjct: 61 VSSRHRLIMCQLAVQNSDWIRVDPWECYQDTWQTTCSVLEHHRDLMKRVTGCILSNVNTP 120
Query: 498 SMTPVIGQPQNETSQPIYQNSNVPTKPTAAKILGKVGESLSRICCVRPPVERFTFVDENA 677
SMTPVIGQP+NETSQPIYQN+N P+KPTAAKILGKVGESLSRICCVRPPVERFTFVDENA
Sbjct: 121 SMTPVIGQPRNETSQPIYQNNNAPSKPTAAKILGKVGESLSRICCVRPPVERFTFVDENA 180
Query: 678 NLGTVMRYXXXXXXXXXXCGSDLLESFCIPGLWNEADMEVIVGDFGIVVVPRDAADTDRI 857
NLGTVMRY CGSDLLESFCIPGLWNEADMEVIVGDFGIVVVPRDAADTDRI
Sbjct: 181 NLGTVMRYEEIELRILLLCGSDLLESFCIPGLWNEADMEVIVGDFGIVVVPRDAADTDRI 240
Query: 858 MNHSSILRKYKNN 896
MNHSSILRKYKNN
Sbjct: 241 MNHSSILRKYKNN 253
>ref|NP_001069302.1| nicotinamide mononucleotide adenylyltransferase 1 [Bos taurus].
Length = 281
Score = 158 bits (400), Expect = 5e-39
Identities = 89/253 (35%), Positives = 131/253 (51%)
Frame = +3
Query: 138 MTETTKTHVILLACGSFNPITKGHIQMFERARDYLHKTGRFIVIGGIVSPVHDSYGKQGL 317
M + KT V+LLACGSFNPIT H+++FE A+DY++ TG++ VI GI+SPV D+Y K+GL
Sbjct: 1 MENSEKTEVVLLACGSFNPITNMHLRLFELAKDYMNGTGKYKVIKGIISPVGDAYKKKGL 60
Query: 318 VSSRHRLIMCQLAVQNSDWIRVDPWECYQDTWQTTCSVLEHHRDLMKRVTGCILSNVNTP 497
+S+ HR+IM +LA +NS W+ VD WE Q W T VL HH++
Sbjct: 61 ISAYHRVIMAELATKNSKWVEVDTWESLQKEWTETAKVLRHHQE---------------- 104
Query: 498 SMTPVIGQPQNETSQPIYQNSNVPTKPTAAKILGKVGESLSRICCVRPPVERFTFVDENA 677
+ I PQ QNS V KP + + + +S +++
Sbjct: 105 KLEASICDPQ--------QNSPVLEKPGRKRKWAEQKQDIS----------EKKSLEQTK 146
Query: 678 NLGTVMRYXXXXXXXXXXCGSDLLESFCIPGLWNEADMEVIVGDFGIVVVPRDAADTDRI 857
G CG+D LESF +P LW D+ I+GD+G++ + R D +
Sbjct: 147 TKGV--------PKVKLLCGADFLESFGVPNLWKSEDITKILGDYGLICITRAGNDAQKF 198
Query: 858 MNHSSILRKYKNN 896
+ S +L K++NN
Sbjct: 199 IYESDVLWKHQNN 211
>ref|XP_002705487.1| PREDICTED: nicotinamide mononucleotide adenylyltransferase 2-like,
partial [Bos taurus].
Length = 137
Score = 145 bits (365), Expect = 6e-35
Identities = 69/82 (84%), Positives = 76/82 (92%)
Frame = +3
Query: 456 KRVTGCILSNVNTPSMTPVIGQPQNETSQPIYQNSNVPTKPTAAKILGKVGESLSRICCV 635
+RVTGCILSNV TPSMT +IGQPQ ETSQPIYQN+N+P+KPTAAKILGKVGESLS ICCV
Sbjct: 27 QRVTGCILSNVTTPSMTTLIGQPQYETSQPIYQNNNMPSKPTAAKILGKVGESLSWICCV 86
Query: 636 RPPVERFTFVDENANLGTVMRY 701
PPVERF+FVD+NANLG VMRY
Sbjct: 87 HPPVERFSFVDDNANLGMVMRY 108
>ref|XP_002689422.1| PREDICTED: nicotinamide mononucleotide adenylyltransferase 2-like
[Bos taurus].
Length = 159
Score = 142 bits (359), Expect = 3e-34
Identities = 68/80 (85%), Positives = 74/80 (92%)
Frame = +3
Query: 462 VTGCILSNVNTPSMTPVIGQPQNETSQPIYQNSNVPTKPTAAKILGKVGESLSRICCVRP 641
VTGCILSNV TPSMT +IGQPQ ETSQPIYQN+N+P+KPTAAKILGKVGESLS ICCV P
Sbjct: 29 VTGCILSNVTTPSMTTLIGQPQYETSQPIYQNNNMPSKPTAAKILGKVGESLSWICCVHP 88
Query: 642 PVERFTFVDENANLGTVMRY 701
PVERF+FVD+NANLG VMRY
Sbjct: 89 PVERFSFVDDNANLGMVMRY 108
>ref|XP_002685113.1| PREDICTED: nicotinamide mononucleotide adenylyltransferase 3-like
[Bos taurus].
Length = 279
Score = 89.0 bits (219), Expect = 5e-18
Identities = 40/77 (51%), Positives = 53/77 (68%)
Frame = +3
Query: 231 RDYLHKTGRFIVIGGIVSPVHDSYGKQGLVSSRHRLIMCQLAVQNSDWIRVDPWECYQDT 410
R + K R+ VIGGI+SPV+D+Y K+GLV+++HR+ M +LA+Q SDWIRVD WE Q
Sbjct: 62 RQIIDKDSRYQVIGGIISPVNDNYRKKGLVAAQHRVAMARLALQTSDWIRVDSWESEQAQ 121
Query: 411 WQTTCSVLEHHRDLMKR 461
W T VL HH + R
Sbjct: 122 WMETIKVLRHHHSELLR 138
>ref|XP_596322.3| PREDICTED: nicotinamide mononucleotide adenylyltransferase 3-like
[Bos taurus].
Length = 220
Score = 87.8 bits (216), Expect = 1e-17
Identities = 39/70 (55%), Positives = 51/70 (72%)
Frame = +3
Query: 252 GRFIVIGGIVSPVHDSYGKQGLVSSRHRLIMCQLAVQNSDWIRVDPWECYQDTWQTTCSV 431
GR+ VIGGI+SPV+D+Y K+GLV+++HR+ M +LA+Q SDWIRVD WE Q W T V
Sbjct: 10 GRYQVIGGIISPVNDNYRKKGLVAAQHRVAMARLALQTSDWIRVDSWESEQAQWMETIKV 69
Query: 432 LEHHRDLMKR 461
L HH + R
Sbjct: 70 LRHHHSELLR 79
Database: RefSeq49_BP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 17,681,374
Number of sequences in database: 33,088
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33088
Number of Hits to DB: 36,726,924
Number of extensions: 1068980
Number of successful extensions: 4468
Number of sequences better than 1.0e-05: 6
Number of HSP's gapped: 4443
Number of HSP's successfully gapped: 7
Length of query: 299
Length of database: 17,681,374
Length adjustment: 102
Effective length of query: 197
Effective length of database: 14,306,398
Effective search space: 2818360406
Effective search space used: 2818360406
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)
Animal-Genome cDNA 20110601C-015191
Search to RefSeqCP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-015191
(898 letters)
Database: RefSeq49_CP.fasta
33,336 sequences; 18,874,504 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_853203.1| PREDICTED: similar to nicotinamide mononucleoti... 439 e-123
Alignment gi|XP_536739.1| PREDICTED: similar to nicotinamide nucleotide a... 155 4e-38
Alignment gi|XP_534286.2| PREDICTED: similar to Nicotinamide mononucleoti... 131 1e-30
>ref|XP_853203.1| PREDICTED: similar to nicotinamide mononucleotide
adenylyltransferase 2 isoform 2 [Canis familiaris].
Length = 356
Score = 439 bits (1128), Expect = e-123
Identities = 212/225 (94%), Positives = 213/225 (94%)
Frame = +3
Query: 222 ERARDYLHKTGRFIVIGGIVSPVHDSYGKQGLVSSRHRLIMCQLAVQNSDWIRVDPWECY 401
+RARDYLHKTGRFIVIGGIVSPVHDSYGKQGLVSSRHRLIMCQLAVQNSDWIRVDPWECY
Sbjct: 78 KRARDYLHKTGRFIVIGGIVSPVHDSYGKQGLVSSRHRLIMCQLAVQNSDWIRVDPWECY 137
Query: 402 QDTWQTTCSVLEHHRDLMKRVTGCILSNVNTPSMTPVIGQPQNETSQPIYQNSNVPTKPT 581
QDTWQTTCSVLEHHRDLMKRVTGCILSNVNTPSMTPVIGQPQNET QPIYQNSNV TKPT
Sbjct: 138 QDTWQTTCSVLEHHRDLMKRVTGCILSNVNTPSMTPVIGQPQNETPQPIYQNSNVSTKPT 197
Query: 582 AAKILGKVGESLSRICCVRPPVERFTFVDENANLGTVMRYXXXXXXXXXXCGSDLLESFC 761
AAKILGKVGESLSRICCVRPPVERFTFVDENANLGTVMRY CGSDLLESFC
Sbjct: 198 AAKILGKVGESLSRICCVRPPVERFTFVDENANLGTVMRYEEIELRILLLCGSDLLESFC 257
Query: 762 IPGLWNEADMEVIVGDFGIVVVPRDAADTDRIMNHSSILRKYKNN 896
IPGLWNEADMEVIVGDFGIVVVPRDAADTDRIMNHSSILRKYKNN
Sbjct: 258 IPGLWNEADMEVIVGDFGIVVVPRDAADTDRIMNHSSILRKYKNN 302
>ref|XP_536739.1| PREDICTED: similar to nicotinamide nucleotide adenylyltransferase 1
[Canis familiaris].
Length = 279
Score = 155 bits (393), Expect = 4e-38
Identities = 89/256 (34%), Positives = 132/256 (51%), Gaps = 5/256 (1%)
Frame = +3
Query: 144 ETTKTHVILLACGSFNPITKGHIQMFERARDYLHKTGRFIVIGGIVSPVHDSYGKQGLVS 323
E +K V+LLACGSFNPIT H+++FE A+DY++ TG++ VI GI+SPV D+Y K+GL+S
Sbjct: 2 ENSKMEVVLLACGSFNPITNMHLRLFELAKDYMNGTGKYKVIKGIISPVGDAYKKKGLIS 61
Query: 324 SRHRLIMCQLAVQNSDWIRVDPWECYQDTWQTTCSVLEHHRDLMKRVTGCILSNVNTPSM 503
+ HR+IM +LA ++S+W+ VD WE Q W T VL HH++ ++ + +
Sbjct: 62 AHHRVIMAELATKSSEWVEVDTWESLQKEWVETAKVLRHHQEKLE------AGSCDHQQD 115
Query: 504 TPVIGQPQN-----ETSQPIYQNSNVPTKPTAAKILGKVGESLSRICCVRPPVERFTFVD 668
+PV G+P E Q Q ++ K K + KV
Sbjct: 116 SPVRGRPGQKRKWAEQRQDFSQKKSLEPK---TKDVPKV--------------------- 151
Query: 669 ENANLGTVMRYXXXXXXXXXXCGSDLLESFCIPGLWNEADMEVIVGDFGIVVVPRDAADT 848
CG+DLLESF +P LW D+ IVGD+G+V + R D
Sbjct: 152 ------------------KLLCGADLLESFGVPNLWKSEDITQIVGDYGLVCITRAGNDA 193
Query: 849 DRIMNHSSILRKYKNN 896
+ + S L +++NN
Sbjct: 194 QKFIYESDALWQHRNN 209
>ref|XP_534286.2| PREDICTED: similar to Nicotinamide mononucleotide
adenylyltransferase 3 (NMN adenylyltransferase 3) [Canis
familiaris].
Length = 297
Score = 131 bits (329), Expect = 1e-30
Identities = 59/100 (59%), Positives = 76/100 (76%)
Frame = +3
Query: 162 VILLACGSFNPITKGHIQMFERARDYLHKTGRFIVIGGIVSPVHDSYGKQGLVSSRHRLI 341
V+LLACGSFNPIT H+++FE ARD+LH+TG + VIGGI+SPV+D+Y K+ LVS+ HR+
Sbjct: 40 VVLLACGSFNPITNMHLRLFEVARDHLHQTGLYQVIGGIISPVNDNYRKKDLVSAHHRVA 99
Query: 342 MCQLAVQNSDWIRVDPWECYQDTWQTTCSVLEHHRDLMKR 461
M +LA+Q SDW+RVDPWE Q W T VL HH + R
Sbjct: 100 MARLALQTSDWVRVDPWESEQVQWMETVKVLRHHHSELLR 139
Score = 48.9 bits (115), Expect = 6e-06
Identities = 22/55 (40%), Positives = 35/55 (63%)
Frame = +3
Query: 732 CGSDLLESFCIPGLWNEADMEVIVGDFGIVVVPRDAADTDRIMNHSSILRKYKNN 896
CG+D+L++F P LW +A ++ IV FGIV V R + ++ S IL +Y++N
Sbjct: 167 CGADVLKTFQTPNLWKDAHIQEIVEKFGIVCVSRTGHNPKEYISGSPILHRYRHN 221
Database: RefSeq49_CP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,874,504
Number of sequences in database: 33,336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33336
Number of Hits to DB: 38,286,874
Number of extensions: 1109434
Number of successful extensions: 4574
Number of sequences better than 1.0e-05: 3
Number of HSP's gapped: 4558
Number of HSP's successfully gapped: 5
Length of query: 299
Length of database: 18,874,504
Length adjustment: 102
Effective length of query: 197
Effective length of database: 15,474,232
Effective search space: 3048423704
Effective search space used: 3048423704
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)
Search to RefSeqSP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-015191
(898 letters)
Database: RefSeq49_SP.fasta
24,897 sequences; 11,343,932 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_003130415.1| PREDICTED: nicotinamide mononucleotide adeny... 503 e-143
Alignment gi|XP_003358633.1| PREDICTED: nicotinamide mononucleotide adeny... 92 4e-19
>ref|XP_003130415.1| PREDICTED: nicotinamide mononucleotide adenylyltransferase 2-like
[Sus scrofa].
Length = 307
Score = 503 bits (1294), Expect = e-143
Identities = 243/253 (96%), Positives = 243/253 (96%)
Frame = +3
Query: 138 MTETTKTHVILLACGSFNPITKGHIQMFERARDYLHKTGRFIVIGGIVSPVHDSYGKQGL 317
MTETTKTHVILLACGSFNPITKGHIQMFERARDYLHKTGRFIVIGGIVSPVHDSYGKQGL
Sbjct: 1 MTETTKTHVILLACGSFNPITKGHIQMFERARDYLHKTGRFIVIGGIVSPVHDSYGKQGL 60
Query: 318 VSSRHRLIMCQLAVQNSDWIRVDPWECYQDTWQTTCSVLEHHRDLMKRVTGCILSNVNTP 497
VSSRHRLIMCQLAVQNSDWIRVDPWECYQDTWQTTCSVLEHHRDLMKRVTGCILSNVNTP
Sbjct: 61 VSSRHRLIMCQLAVQNSDWIRVDPWECYQDTWQTTCSVLEHHRDLMKRVTGCILSNVNTP 120
Query: 498 SMTPVIGQPQNETSQPIYQNSNVPTKPTAAKILGKVGESLSRICCVRPPVERFTFVDENA 677
SMTPVIGQPQNETSQPIYQNSNVPTKPTAAKILGKVGESLSRICCVRPPVERFTFVDENA
Sbjct: 121 SMTPVIGQPQNETSQPIYQNSNVPTKPTAAKILGKVGESLSRICCVRPPVERFTFVDENA 180
Query: 678 NLGTVMRYXXXXXXXXXXCGSDLLESFCIPGLWNEADMEVIVGDFGIVVVPRDAADTDRI 857
NLGTVMRY CGSDLLESFCIPGLWNEADMEVIVGDFGIVVVPRDAADTDRI
Sbjct: 181 NLGTVMRYEEIELRILLLCGSDLLESFCIPGLWNEADMEVIVGDFGIVVVPRDAADTDRI 240
Query: 858 MNHSSILRKYKNN 896
MNHSSILRKYKNN
Sbjct: 241 MNHSSILRKYKNN 253
>ref|XP_003358633.1| PREDICTED: nicotinamide mononucleotide adenylyltransferase 3-like
[Sus scrofa].
Length = 246
Score = 92.0 bits (227), Expect = 4e-19
Identities = 40/70 (57%), Positives = 52/70 (74%)
Frame = +3
Query: 252 GRFIVIGGIVSPVHDSYGKQGLVSSRHRLIMCQLAVQNSDWIRVDPWECYQDTWQTTCSV 431
GR+ V+GGI+SPV+D+YGK+ LV++RHR+ M +LA+Q SDWIRVDPWE Q W T V
Sbjct: 23 GRYQVVGGIISPVNDNYGKKDLVAARHRVAMARLALQTSDWIRVDPWESEQAQWMETVKV 82
Query: 432 LEHHRDLMKR 461
L HH + R
Sbjct: 83 LRHHHGELLR 92
Database: RefSeq49_SP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 11,343,932
Number of sequences in database: 24,897
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 24897
Number of Hits to DB: 23,684,413
Number of extensions: 689017
Number of successful extensions: 2812
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 2797
Number of HSP's successfully gapped: 2
Length of query: 299
Length of database: 11,343,932
Length adjustment: 98
Effective length of query: 201
Effective length of database: 8,904,026
Effective search space: 1789709226
Effective search space used: 1789709226
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 33 (17.3 bits)
Search to RefSeqMP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-015191
(898 letters)
Database: RefSeq49_MP.fasta
30,036 sequences; 15,617,559 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_780669.1| nicotinamide mononucleotide adenylyltransferase... 498 e-141
Alignment gi|NP_597679.1| nicotinamide mononucleotide adenylyltransferase... 165 5e-41
Alignment gi|NP_653116.1| nicotinamide mononucleotide adenylyltransferase... 136 2e-32
>ref|NP_780669.1| nicotinamide mononucleotide adenylyltransferase 2 [Mus musculus].
Length = 307
Score = 498 bits (1281), Expect = e-141
Identities = 240/253 (94%), Positives = 242/253 (95%)
Frame = +3
Query: 138 MTETTKTHVILLACGSFNPITKGHIQMFERARDYLHKTGRFIVIGGIVSPVHDSYGKQGL 317
MTETTKTHVILLACGSFNPITKGHIQMFERARDYLHKTGRFIVIGGIVSPVHDSYGKQGL
Sbjct: 1 MTETTKTHVILLACGSFNPITKGHIQMFERARDYLHKTGRFIVIGGIVSPVHDSYGKQGL 60
Query: 318 VSSRHRLIMCQLAVQNSDWIRVDPWECYQDTWQTTCSVLEHHRDLMKRVTGCILSNVNTP 497
VSSRHRLIMCQLAVQNSDWIRVDPWECYQDTWQTTCSVLEHHRDLMKRVTGCILSNVNTP
Sbjct: 61 VSSRHRLIMCQLAVQNSDWIRVDPWECYQDTWQTTCSVLEHHRDLMKRVTGCILSNVNTP 120
Query: 498 SMTPVIGQPQNETSQPIYQNSNVPTKPTAAKILGKVGESLSRICCVRPPVERFTFVDENA 677
SMTPVIGQPQ+E +QPIYQNSNVPTKPTAAKILGKVGESLSRICCVRPPVERFTFVDENA
Sbjct: 121 SMTPVIGQPQHENTQPIYQNSNVPTKPTAAKILGKVGESLSRICCVRPPVERFTFVDENA 180
Query: 678 NLGTVMRYXXXXXXXXXXCGSDLLESFCIPGLWNEADMEVIVGDFGIVVVPRDAADTDRI 857
NLGTVMRY CGSDLLESFCIPGLWNEADMEVIVGDFGIVVVPRDAADTDRI
Sbjct: 181 NLGTVMRYEEIELRILLLCGSDLLESFCIPGLWNEADMEVIVGDFGIVVVPRDAADTDRI 240
Query: 858 MNHSSILRKYKNN 896
MNHSSILRKYKNN
Sbjct: 241 MNHSSILRKYKNN 253
>ref|NP_597679.1| nicotinamide mononucleotide adenylyltransferase 1 [Mus musculus].
Length = 285
Score = 165 bits (417), Expect = 5e-41
Identities = 89/253 (35%), Positives = 134/253 (52%)
Frame = +3
Query: 138 MTETTKTHVILLACGSFNPITKGHIQMFERARDYLHKTGRFIVIGGIVSPVHDSYGKQGL 317
M + KT V+LLACGSFNPIT H+++FE A+DY+H TG++ VI GI+SPV D+Y K+GL
Sbjct: 1 MDSSKKTEVVLLACGSFNPITNMHLRLFELAKDYMHATGKYSVIKGIISPVGDAYKKKGL 60
Query: 318 VSSRHRLIMCQLAVQNSDWIRVDPWECYQDTWQTTCSVLEHHRDLMKRVTGCILSNVNTP 497
+ + HR+IM +LA +NS W+ VD WE Q W T VL +H++ K TG + + P
Sbjct: 61 IPAHHRIIMAELATKNSHWVEVDTWESLQKEWVETVKVLRYHQE--KLATG----SCSYP 114
Query: 498 SMTPVIGQPQNETSQPIYQNSNVPTKPTAAKILGKVGESLSRICCVRPPVERFTFVDENA 677
+P + +P + + + P KP K G P V+
Sbjct: 115 QSSPALEKPGRKRKWADQKQDSSPQKPQEPKPTGV------------PKVK--------- 153
Query: 678 NLGTVMRYXXXXXXXXXXCGSDLLESFCIPGLWNEADMEVIVGDFGIVVVPRDAADTDRI 857
CG+DLLESF +P LW D+ IV +FG++ + R +D +
Sbjct: 154 ----------------LLCGADLLESFSVPNLWKMEDITQIVANFGLICITRAGSDAQKF 197
Query: 858 MNHSSILRKYKNN 896
+ S +L ++++N
Sbjct: 198 IYESDVLWRHQSN 210
>ref|NP_653116.1| nicotinamide mononucleotide adenylyltransferase 3 [Mus musculus].
Length = 245
Score = 136 bits (342), Expect = 2e-32
Identities = 63/100 (63%), Positives = 80/100 (80%), Gaps = 1/100 (1%)
Frame = +3
Query: 162 VILLACGSFNPITKGHIQMFERARDYLHKTGRFIVIGGIVSPVHDSYGKQGLVSSRHRLI 341
V+LLACGSFNPIT H+++FE ARD+LH+TGR+ VI GI+SPV+DSYGK+ LV+S HR+
Sbjct: 7 VVLLACGSFNPITNMHLRLFEVARDHLHQTGRYQVIEGIISPVNDSYGKKDLVASHHRVA 66
Query: 342 MCQLAVQNSDWIRVDPWECYQDTWQTTCSVL-EHHRDLMK 458
M +LA+Q SDWIRVDPWE Q W T VL HHR+L++
Sbjct: 67 MARLALQTSDWIRVDPWESEQAQWMETVKVLRHHHRELLR 106
Score = 50.4 bits (119), Expect = 2e-06
Identities = 21/55 (38%), Positives = 37/55 (67%)
Frame = +3
Query: 732 CGSDLLESFCIPGLWNEADMEVIVGDFGIVVVPRDAADTDRIMNHSSILRKYKNN 896
CG+D+L++F P LW + ++ IV FG+V V R D +R ++ S IL+++++N
Sbjct: 133 CGADVLKTFQTPNLWKDTHIQEIVEKFGLVCVSRSGHDPERYISDSPILQQFQHN 187
Database: RefSeq49_MP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 15,617,559
Number of sequences in database: 30,036
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 30036
Number of Hits to DB: 31,763,456
Number of extensions: 902381
Number of successful extensions: 3491
Number of sequences better than 1.0e-05: 3
Number of HSP's gapped: 3467
Number of HSP's successfully gapped: 5
Length of query: 299
Length of database: 15,617,559
Length adjustment: 101
Effective length of query: 198
Effective length of database: 12,583,923
Effective search space: 2491616754
Effective search space used: 2491616754
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)
Search to RefSeqHP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-015191
(898 letters)
Database: RefSeq49_HP.fasta
32,964 sequences; 18,297,164 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_055854.1| nicotinamide mononucleotide adenylyltransferase... 498 e-141
Alignment gi|NP_733820.1| nicotinamide mononucleotide adenylyltransferase... 441 e-124
Alignment gi|NP_073624.2| nicotinamide mononucleotide adenylyltransferase... 156 2e-38
Alignment gi|NP_835471.1| nicotinamide mononucleotide adenylyltransferase... 84 2e-16
Alignment gi|NP_001186976.1| nicotinamide mononucleotide adenylyltransfer... 52 1e-06
>ref|NP_055854.1| nicotinamide mononucleotide adenylyltransferase 2 isoform 1 [Homo
sapiens].
Length = 307
Score = 498 bits (1281), Expect = e-141
Identities = 241/253 (95%), Positives = 241/253 (95%)
Frame = +3
Query: 138 MTETTKTHVILLACGSFNPITKGHIQMFERARDYLHKTGRFIVIGGIVSPVHDSYGKQGL 317
MTETTKTHVILLACGSFNPITKGHIQMFERARDYLHKTGRFIVIGGIVSPVHDSYGKQGL
Sbjct: 1 MTETTKTHVILLACGSFNPITKGHIQMFERARDYLHKTGRFIVIGGIVSPVHDSYGKQGL 60
Query: 318 VSSRHRLIMCQLAVQNSDWIRVDPWECYQDTWQTTCSVLEHHRDLMKRVTGCILSNVNTP 497
VSSRHRLIMCQLAVQNSDWIRVDPWECYQDTWQTTCSVLEHHRDLMKRVTGCILSNVNTP
Sbjct: 61 VSSRHRLIMCQLAVQNSDWIRVDPWECYQDTWQTTCSVLEHHRDLMKRVTGCILSNVNTP 120
Query: 498 SMTPVIGQPQNETSQPIYQNSNVPTKPTAAKILGKVGESLSRICCVRPPVERFTFVDENA 677
SMTPVIGQPQNET QPIYQNSNV TKPTAAKILGKVGESLSRICCVRPPVERFTFVDENA
Sbjct: 121 SMTPVIGQPQNETPQPIYQNSNVATKPTAAKILGKVGESLSRICCVRPPVERFTFVDENA 180
Query: 678 NLGTVMRYXXXXXXXXXXCGSDLLESFCIPGLWNEADMEVIVGDFGIVVVPRDAADTDRI 857
NLGTVMRY CGSDLLESFCIPGLWNEADMEVIVGDFGIVVVPRDAADTDRI
Sbjct: 181 NLGTVMRYEEIELRILLLCGSDLLESFCIPGLWNEADMEVIVGDFGIVVVPRDAADTDRI 240
Query: 858 MNHSSILRKYKNN 896
MNHSSILRKYKNN
Sbjct: 241 MNHSSILRKYKNN 253
>ref|NP_733820.1| nicotinamide mononucleotide adenylyltransferase 2 isoform 2 [Homo
sapiens].
Length = 302
Score = 441 bits (1134), Expect = e-124
Identities = 213/229 (93%), Positives = 215/229 (93%)
Frame = +3
Query: 210 IQMFERARDYLHKTGRFIVIGGIVSPVHDSYGKQGLVSSRHRLIMCQLAVQNSDWIRVDP 389
+ + ERARDYLHKTGRFIVIGGIVSPVHDSYGKQGLVSSRHRLIMCQLAVQNSDWIRVDP
Sbjct: 20 VTLSERARDYLHKTGRFIVIGGIVSPVHDSYGKQGLVSSRHRLIMCQLAVQNSDWIRVDP 79
Query: 390 WECYQDTWQTTCSVLEHHRDLMKRVTGCILSNVNTPSMTPVIGQPQNETSQPIYQNSNVP 569
WECYQDTWQTTCSVLEHHRDLMKRVTGCILSNVNTPSMTPVIGQPQNET QPIYQNSNV
Sbjct: 80 WECYQDTWQTTCSVLEHHRDLMKRVTGCILSNVNTPSMTPVIGQPQNETPQPIYQNSNVA 139
Query: 570 TKPTAAKILGKVGESLSRICCVRPPVERFTFVDENANLGTVMRYXXXXXXXXXXCGSDLL 749
TKPTAAKILGKVGESLSRICCVRPPVERFTFVDENANLGTVMRY CGSDLL
Sbjct: 140 TKPTAAKILGKVGESLSRICCVRPPVERFTFVDENANLGTVMRYEEIELRILLLCGSDLL 199
Query: 750 ESFCIPGLWNEADMEVIVGDFGIVVVPRDAADTDRIMNHSSILRKYKNN 896
ESFCIPGLWNEADMEVIVGDFGIVVVPRDAADTDRIMNHSSILRKYKNN
Sbjct: 200 ESFCIPGLWNEADMEVIVGDFGIVVVPRDAADTDRIMNHSSILRKYKNN 248
>ref|NP_073624.2| nicotinamide mononucleotide adenylyltransferase 1 [Homo sapiens].
Length = 279
Score = 156 bits (395), Expect = 2e-38
Identities = 86/253 (33%), Positives = 133/253 (52%)
Frame = +3
Query: 138 MTETTKTHVILLACGSFNPITKGHIQMFERARDYLHKTGRFIVIGGIVSPVHDSYGKQGL 317
M + KT V+LLACGSFNPIT H+++FE A+DY++ TGR+ V+ GI+SPV D+Y K+GL
Sbjct: 1 MENSEKTEVVLLACGSFNPITNMHLRLFELAKDYMNGTGRYTVVKGIISPVGDAYKKKGL 60
Query: 318 VSSRHRLIMCQLAVQNSDWIRVDPWECYQDTWQTTCSVLEHHRDLMKRVTGCILSNVNTP 497
+ + HR+IM +LA +NS W+ VD WE Q W+ T VL HH++ ++ S+ +
Sbjct: 61 IPAYHRVIMAELATKNSKWVEVDTWESLQKEWKETLKVLRHHQEKLE------ASDCDHQ 114
Query: 498 SMTPVIGQPQNETSQPIYQNSNVPTKPTAAKILGKVGESLSRICCVRPPVERFTFVDENA 677
+P + +P + Q+S+ +SL P V+
Sbjct: 115 QNSPTLERPGRKRKWTETQDSSQK-------------KSLEPKTKAVPKVK--------- 152
Query: 678 NLGTVMRYXXXXXXXXXXCGSDLLESFCIPGLWNEADMEVIVGDFGIVVVPRDAADTDRI 857
CG+DLLESF +P LW D+ IV ++G++ V R D +
Sbjct: 153 ----------------LLCGADLLESFAVPNLWKSEDITQIVANYGLICVTRAGNDAQKF 196
Query: 858 MNHSSILRKYKNN 896
+ S +L K+++N
Sbjct: 197 IYESDVLWKHRSN 209
>ref|NP_835471.1| nicotinamide mononucleotide adenylyltransferase 3 isoform 1 [Homo
sapiens].
Length = 215
Score = 83.6 bits (205), Expect = 2e-16
Identities = 37/66 (56%), Positives = 46/66 (69%)
Frame = +3
Query: 264 VIGGIVSPVHDSYGKQGLVSSRHRLIMCQLAVQNSDWIRVDPWECYQDTWQTTCSVLEHH 443
VI GI+SPV+D+YGK+ L +S HR+ M +LA+Q SDWIRVDPWE Q W T VL HH
Sbjct: 4 VIQGIISPVNDTYGKKDLAASHHRVAMARLALQTSDWIRVDPWESEQAQWMETVKVLRHH 63
Query: 444 RDLMKR 461
+ R
Sbjct: 64 HSKLLR 69
>ref|NP_001186976.1| nicotinamide mononucleotide adenylyltransferase 3 isoform 2 [Homo
sapiens].
Length = 163
Score = 51.6 bits (122), Expect = 1e-06
Identities = 22/30 (73%), Positives = 27/30 (90%)
Frame = +3
Query: 162 VILLACGSFNPITKGHIQMFERARDYLHKT 251
V+LLACGSFNPIT H++MFE ARD+LH+T
Sbjct: 7 VVLLACGSFNPITNMHLRMFEVARDHLHQT 36
Database: RefSeq49_HP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,297,164
Number of sequences in database: 32,964
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 32964
Number of Hits to DB: 37,544,994
Number of extensions: 1081178
Number of successful extensions: 4254
Number of sequences better than 1.0e-05: 5
Number of HSP's gapped: 4237
Number of HSP's successfully gapped: 6
Length of query: 299
Length of database: 18,297,164
Length adjustment: 102
Effective length of query: 197
Effective length of database: 14,934,836
Effective search space: 2942162692
Effective search space used: 2942162692
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)
Search to Sscrofa10_2
BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-015191
(898 letters)
Database: Sscrofa_10.2.fasta
4582 sequences; 2,808,509,378 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Sscrofa_Chr09 438 e-120
gb|GL894033.2| Sus scrofa unplaced genomic scaffold ChrUScaf1917 155 5e-35
>Sscrofa_Chr09
|| Length = 153670197
Score = 438 bits (221), Expect = e-120
Identities = 221/221 (100%)
Strand = Plus / Minus
Query: 2 gcggtttgcgtctggagcggctccttggagtccacagcatccaccgccggagcctcgcct 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 136958505 gcggtttgcgtctggagcggctccttggagtccacagcatccaccgccggagcctcgcct 136958446
Query: 62 tcctttctccctctgcagacatatcgagacacaaaaagagaggcgacccctggacagcgc 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 136958445 tcctttctccctctgcagacatatcgagacacaaaaagagaggcgacccctggacagcgc 136958386
Query: 122 gagggacctactcgcaatgaccgagaccaccaagacccacgttatcttgctcgcctgcgg 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 136958385 gagggacctactcgcaatgaccgagaccaccaagacccacgttatcttgctcgcctgcgg 136958326
Query: 182 cagcttcaatcccatcaccaaagggcacattcagatgttcg 222
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 136958325 cagcttcaatcccatcaccaaagggcacattcagatgttcg 136958285
Score = 256 bits (129), Expect = 2e-65
Identities = 129/129 (100%)
Strand = Plus / Minus
Query: 457 agcgggtgactggctgcatcctctccaatgttaacacaccctccatgacacctgtcatcg 516
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 136837382 agcgggtgactggctgcatcctctccaatgttaacacaccctccatgacacctgtcatcg 136837323
Query: 517 gacagccccagaatgagacctcccagcccatttaccagaacagcaatgtgcccaccaagc 576
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 136837322 gacagccccagaatgagacctcccagcccatttaccagaacagcaatgtgcccaccaagc 136837263
Query: 577 ccacggcag 585
|||||||||
Sbjct: 136837262 ccacggcag 136837254
Score = 202 bits (102), Expect = 2e-49
Identities = 102/102 (100%)
Strand = Plus / Minus
Query: 789 atggaggtgattgtgggggactttgggatcgtggtggtgccccgggatgcagctgacaca 848
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 136816277 atggaggtgattgtgggggactttgggatcgtggtggtgccccgggatgcagctgacaca 136816218
Query: 849 gaccgaattatgaatcactcctcaatactccgcaaatataaa 890
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 136816217 gaccgaattatgaatcactcctcaatactccgcaaatataaa 136816176
Score = 180 bits (91), Expect = 9e-43
Identities = 91/91 (100%)
Strand = Plus / Minus
Query: 222 gaaagagccagggattatctgcacaaaaccggaaggtttattgtcattggcgggattgtc 281
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 136844047 gaaagagccagggattatctgcacaaaaccggaaggtttattgtcattggcgggattgtc 136843988
Query: 282 tctcctgtccacgactcctatggaaaacagg 312
|||||||||||||||||||||||||||||||
Sbjct: 136843987 tctcctgtccacgactcctatggaaaacagg 136843957
Score = 165 bits (83), Expect = 5e-38
Identities = 83/83 (100%)
Strand = Plus / Minus
Query: 584 agccaagatcctgggaaaggtgggtgagagcctaagccggatctgctgtgtccgcccgcc 643
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 136835700 agccaagatcctgggaaaggtgggtgagagcctaagccggatctgctgtgtccgcccgcc 136835641
Query: 644 ggtggagcgcttcacctttgtgg 666
|||||||||||||||||||||||
Sbjct: 136835640 ggtggagcgcttcacctttgtgg 136835618
Score = 165 bits (83), Expect = 5e-38
Identities = 83/83 (100%)
Strand = Plus / Minus
Query: 376 tcagggtggacccgtgggagtgctaccaggacacctggcagacgacctgcagcgttctcg 435
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 136840945 tcagggtggacccgtgggagtgctaccaggacacctggcagacgacctgcagcgttctcg 136840886
Query: 436 aacaccatcgggacctcatgaag 458
|||||||||||||||||||||||
Sbjct: 136840885 aacaccatcgggacctcatgaag 136840863
Score = 155 bits (78), Expect = 5e-35
Identities = 78/78 (100%)
Strand = Plus / Minus
Query: 711 gagctgcggatcttgctgctgtgtggcagtgaccttctggagtccttctgcatcccaggg 770
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 136830319 gagctgcggatcttgctgctgtgtggcagtgaccttctggagtccttctgcatcccaggg 136830260
Query: 771 ctctggaacgaggcagat 788
||||||||||||||||||
Sbjct: 136830259 ctctggaacgaggcagat 136830242
Score = 135 bits (68), Expect = 5e-29
Identities = 71/72 (98%)
Strand = Plus / Minus
Query: 309 cagggccttgtgtcgagcaggcaccgtctcatcatgtgtcagctggccgtccagaactcc 368
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 136843162 cagggccttgtgtcgagccggcaccgtctcatcatgtgtcagctggccgtccagaactcc 136843103
Query: 369 gattggatcagg 380
||||||||||||
Sbjct: 136843102 gattggatcagg 136843091
Score = 91.7 bits (46), Expect = 6e-16
Identities = 46/46 (100%)
Strand = Plus / Minus
Query: 666 gacgagaacgccaatctgggcacggtgatgcggtacgaggagatcg 711
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 136834538 gacgagaacgccaatctgggcacggtgatgcggtacgaggagatcg 136834493
>gb|GL894033.2| Sus scrofa unplaced genomic scaffold ChrUScaf1917
Length = 67829
Score = 155 bits (78), Expect = 5e-35
Identities = 78/78 (100%)
Strand = Plus / Plus
Query: 711 gagctgcggatcttgctgctgtgtggcagtgaccttctggagtccttctgcatcccaggg 770
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6770 gagctgcggatcttgctgctgtgtggcagtgaccttctggagtccttctgcatcccaggg 6829
Query: 771 ctctggaacgaggcagat 788
||||||||||||||||||
Sbjct: 6830 ctctggaacgaggcagat 6847
Score = 95.6 bits (48), Expect = 4e-17
Identities = 48/48 (100%)
Strand = Plus / Plus
Query: 584 agccaagatcctgggaaaggtgggtgagagcctaagccggatctgctg 631
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1465 agccaagatcctgggaaaggtgggtgagagcctaagccggatctgctg 1512
Score = 91.7 bits (46), Expect = 6e-16
Identities = 46/46 (100%)
Strand = Plus / Plus
Query: 666 gacgagaacgccaatctgggcacggtgatgcggtacgaggagatcg 711
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2781 gacgagaacgccaatctgggcacggtgatgcggtacgaggagatcg 2826
Database: Sscrofa_10.2.fasta
Posted date: Nov 16, 2011 10:34 AM
Number of letters in database: 2,808,509,378
Number of sequences in database: 4582
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4582
Number of Hits to DB: 22,581,324
Number of extensions: 122
Number of successful extensions: 122
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 122
Number of HSP's successfully gapped: 12
Length of query: 898
Length of database: 2,808,509,378
Length adjustment: 21
Effective length of query: 877
Effective length of database: 2,808,413,156
Effective search space: 2462978337812
Effective search space used: 2462978337812
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 18 (36.2 bits)
S2: 29 (58.0 bits)