Search to RefSeqBP
BLASTX 2.2.10 [Oct-19-2004]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= LVR01_0062_H12
(1212 letters)
Database: RefSeqBP
33,508 sequences; 16,112,626 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_776376.1| plasminogen [Bos taurus] 530 e-151
Alignment gi|XP_592554.2| PREDICTED: similar to Hepatocyte growth factor-... 248 7e-66
Alignment gi|NP_001026921.1| hepatocyte growth factor [Bos taurus] 209 5e-54
Alignment gi|XP_874086.1| PREDICTED: hepatocyte growth factor [Bos taurus] 209 5e-54
Alignment gi|XP_886646.1| PREDICTED: similar to Serine protease hepsin (T... 196 3e-50
Alignment gi|XP_584887.2| PREDICTED: similar to Serine protease hepsin (T... 196 4e-50
Alignment gi|XP_618102.2| PREDICTED: similar to Transmembrane protease, s... 187 2e-47
Alignment gi|NP_001014868.1| hyaluronan binding protein 2 [Bos taurus] 186 3e-47
Alignment gi|XP_607560.2| PREDICTED: similar to Transmembrane protease, s... 186 3e-47
Alignment gi|XP_607216.2| PREDICTED: similar to protease, serine, 33 [Bos... 182 4e-46
>ref|NP_776376.1| plasminogen [Bos taurus]
Length = 812
Score = 530 bits (1365), Expect = e-151
Identities = 249/314 (79%), Positives = 269/314 (85%)
Frame = +3
Query: 3 VAGVPCQEWAAQEPHRHSIFTPGTNPRAGLEKNYCRNPDGDDNGPWCYTTNPQKLFDYCD 182
VAGVPCQEWAAQEPH+HSIFTP TNP++GLE+NYCRNPDGD NGPWCYT NP+K FDYCD
Sbjct: 501 VAGVPCQEWAAQEPHQHSIFTPETNPQSGLERNYCRNPDGDVNGPWCYTMNPRKPFDYCD 560
Query: 183 VPQCVTSSFDCGKPKVEPKKCPARVVGGCVSIPHSWPWQISLRYRYRGHFCGGTLISPEW 362
VPQC SSFDCGKPKVEPKKC R+VGGCVS PHSWPWQ+SLR R HFCGGTLISP+W
Sbjct: 561 VPQC-ESSFDCGKPKVEPKKCSGRIVGGCVSKPHSWPWQVSLRRSSR-HFCGGTLISPKW 618
Query: 363 VLTAKHCLEKSSSPSSYKVILGAHEEHRLGEGVQEIDVSKLFKEPSGADIALLKLSSPAV 542
VLTA HCL+ + S YKVILGAH E + VQEI VS+LF+EPS ADIALLKLS PA+
Sbjct: 619 VLTAAHCLDNILALSFYKVILGAHNEKVREQSVQEIPVSRLFREPSQADIALLKLSRPAI 678
Query: 543 ITDKVIPACLPTPNYVVADRTACYITGWGETKGTYGAGLLKEARLPVIENKVCNRYEYLD 722
IT +VIPACLP PNY+VA RT CYITGWGET+GT+G GLLKEA LPVIENKVCNR EYLD
Sbjct: 679 ITKEVIPACLPPPNYMVAARTECYITGWGETQGTFGEGLLKEAHLPVIENKVCNRNEYLD 738
Query: 723 GKVSSKELCAGHLAGGIDSCQGDSGGPLVCFEKDKYILQGVTSWGLGCALPNKPGVCVRV 902
G+V ELCAGHL GG DSCQGDSGGPLVCFEKDKYILQGVTSWGLGCA PNKPGV VRV
Sbjct: 739 GRVKPTELCAGHLIGGTDSCQGDSGGPLVCFEKDKYILQGVTSWGLGCARPNKPGVYVRV 798
Query: 903 SRFVTWIEEIMRRN 944
S +V WIEE MRRN
Sbjct: 799 SPYVPWIEETMRRN 812
Score = 101 bits (252), Expect = 1e-21
Identities = 42/78 (53%), Positives = 52/78 (66%)
Frame = +3
Query: 6 AGVPCQEWAAQEPHRHSIFTPGTNPRAGLEKNYCRNPDGDDNGPWCYTTNPQKLFDYCDV 185
+GV CQ+W+A PH F+P P AGLE+NYCRNPD D+NGPWCYTT+P K +DYCD+
Sbjct: 127 SGVTCQKWSATSPHVPK-FSPEKFPLAGLEENYCRNPDNDENGPWCYTTDPDKRYDYCDI 185
Query: 186 PQCVTSSFDCGKPKVEPK 239
P+C C E K
Sbjct: 186 PECEDKCMHCSGENYEGK 203
Score = 87.8 bits (216), Expect = 2e-17
Identities = 40/95 (42%), Positives = 57/95 (60%)
Frame = +3
Query: 3 VAGVPCQEWAAQEPHRHSIFTPGTNPRAGLEKNYCRNPDGDDNGPWCYTTNPQKLFDYCD 182
++G CQ W +Q PH H + P P L+ NYCRNPDG+ PWC+TT+PQK +++CD
Sbjct: 208 MSGRDCQAWDSQSPHAHG-YIPSKFPNKNLKMNYCRNPDGEPR-PWCFTTDPQKRWEFCD 265
Query: 183 VPQCVTSSFDCGKPKVEPKKCPARVVGGCVSIPHS 287
+P+C T G PK + K + GG V++ S
Sbjct: 266 IPRCTTPPPSSG-PKYQCLKGTGKNYGGTVAVTES 299
Score = 77.8 bits (190), Expect = 2e-14
Identities = 40/108 (37%), Positives = 56/108 (51%)
Frame = +3
Query: 3 VAGVPCQEWAAQEPHRHSIFTPGTNPRAGLEKNYCRNPDGDDNGPWCYTTNPQKLFDYCD 182
+ G CQ W++ PHRH + TP P AGL NYCRNPD D + PWCYTT+P+ +++C+
Sbjct: 400 ITGRKCQSWSSMTPHRH-LKTPENYPNAGLTMNYCRNPDADKS-PWCYTTDPRVRWEFCN 457
Query: 183 VPQCVTSSFDCGKPKVEPKKCPARVVGGCVSIPHSWPWQISLRYRYRG 326
+ +C + P++ PA V P I YRG
Sbjct: 458 LKKCSET----------PEQVPAAPQAPGVENPPEADCMIGTGKSYRG 495
Score = 76.6 bits (187), Expect = 4e-14
Identities = 32/66 (48%), Positives = 44/66 (66%)
Frame = +3
Query: 6 AGVPCQEWAAQEPHRHSIFTPGTNPRAGLEKNYCRNPDGDDNGPWCYTTNPQKLFDYCDV 185
+G CQ W+ Q PH+H+ TP P LE+NYCRNP+G+ PWCYTTN + ++YC +
Sbjct: 299 SGHTCQRWSEQTPHKHNR-TPENFPCKNLEENYCRNPNGE-KAPWCYTTNSEVRWEYCTI 356
Query: 186 PQCVTS 203
P C +S
Sbjct: 357 PSCESS 362
>ref|XP_592554.2| PREDICTED: similar to Hepatocyte growth factor-like protein precursor
(Macrophage stimulatory protein) (MSP) (Macrophage
stimulating protein) [Bos taurus]
Length = 711
Score = 248 bits (633), Expect = 7e-66
Identities = 138/328 (42%), Positives = 184/328 (56%), Gaps = 18/328 (5%)
Frame = +3
Query: 9 GVPCQEWAAQEPHRHSIFTPGTNPRAGLEKNYCRNPDGDDNGPWCYTTNPQKLFDYCDVP 188
G+ CQ W+A+ PH+ F + P LE+N+CRNPDGD +GPWCYTT+P FDYC +
Sbjct: 388 GIRCQNWSAETPHKPQ-FKHTSAPHTPLEENFCRNPDGDSHGPWCYTTDPGTPFDYCALR 446
Query: 189 QCVTSS------------FD-CGK--PKVEPKKCPARVVGGCVSIPHSWPWQISLRYRYR 323
+C FD CGK +V+P RVVGG P + PW +SLR R
Sbjct: 447 RCDDDQQPSILETAHQVLFDKCGKRVTRVDPLHSKLRVVGGQ---PGNSPWTVSLRNRQG 503
Query: 324 GHFCGGTLISPEWVLTAKHCLEKSS-SPSSYKVILGA-HEEHRLGE-GVQEIDVSKLFKE 494
HFCGG+L+ +WVLTA+ C S Y+V LG ++ + GE +Q I ++K+
Sbjct: 504 QHFCGGSLVKEQWVLTARQCFSSCHMSLVGYEVWLGTLFQDPQPGEPDLQHIPMAKMVCG 563
Query: 495 PSGADIALLKLSSPAVITDKVIPACLPTPNYVVADRTACYITGWGETKGTYGAGLLKEAR 674
PSG+ + LLKL P ++ +V CLP YVV T C I GWGETKGT +L A
Sbjct: 564 PSGSQLVLLKLERPVILNQRVALICLPPERYVVPPGTRCEIAGWGETKGTGDDTVLNIAL 623
Query: 675 LPVIENKVCNRYEYLDGKVSSKELCAGHLAGGIDSCQGDSGGPLVCFEKDKYILQGVTSW 854
L VI N+ CN G+V E+C L + +C+GD GGPL CF D ++LQG+
Sbjct: 624 LSVISNQECNVKH--RGRVRESEMCTAGLLAPVGACEGDYGGPLACFTHDCWVLQGIIIP 681
Query: 855 GLGCALPNKPGVCVRVSRFVTWIEEIMR 938
CA P P + +RVS FV WI ++MR
Sbjct: 682 NRVCARPRWPAIFMRVSVFVDWIHKVMR 709
Score = 75.5 bits (184), Expect = 8e-14
Identities = 33/64 (51%), Positives = 41/64 (64%)
Frame = +3
Query: 3 VAGVPCQEWAAQEPHRHSIFTPGTNPRAGLEKNYCRNPDGDDNGPWCYTTNPQKLFDYCD 182
V G+PCQ W+ + P+ H FTP R GLE+N+CRNPD D GPWCYTT+P F C
Sbjct: 126 VGGLPCQRWSHRFPNDHK-FTPTL--RNGLEENFCRNPDRDPGGPWCYTTDPAVRFQSCG 182
Query: 183 VPQC 194
+ C
Sbjct: 183 IKSC 186
Score = 74.3 bits (181), Expect = 2e-13
Identities = 32/63 (50%), Positives = 40/63 (63%)
Frame = +3
Query: 6 AGVPCQEWAAQEPHRHSIFTPGTNPRAGLEKNYCRNPDGDDNGPWCYTTNPQKLFDYCDV 185
+G CQ W Q PH H F PG L+ NYCRNPDG + PWCYTT+PQ ++CD+
Sbjct: 208 SGRECQRWDLQHPHPHP-FEPGKFLDKNLDDNYCRNPDGSER-PWCYTTDPQMEREFCDL 265
Query: 186 PQC 194
P+C
Sbjct: 266 PRC 268
Score = 63.9 bits (154), Expect = 2e-10
Identities = 28/58 (48%), Positives = 35/58 (60%)
Frame = +3
Query: 6 AGVPCQEWAAQEPHRHSIFTPGTNPRAGLEKNYCRNPDGDDNGPWCYTTNPQKLFDYC 179
AGVPCQ W AQ PH+H F P L +N+CRNPDG + PWC+T+ P +C
Sbjct: 300 AGVPCQRWDAQLPHQHR-FAPEKYACKDLRENFCRNPDGSE-APWCFTSRPGMRMAFC 355
>ref|NP_001026921.1| hepatocyte growth factor [Bos taurus]
Length = 730
Score = 209 bits (531), Expect = 5e-54
Identities = 117/326 (35%), Positives = 173/326 (53%), Gaps = 16/326 (4%)
Frame = +3
Query: 6 AGVPCQEWAA--QEPHRHSIFTPGTNPRAGLEKNYCRNPDGDDNGPWCYTTNPQKLFDYC 179
+G+ C W ++ HRH + P L KNYCRNPD D +GPWCYT NP +DYC
Sbjct: 408 SGLTCSMWDKNMEDLHRHIFWEPDATK---LNKNYCRNPDDDAHGPWCYTGNPLIPWDYC 464
Query: 180 DVPQCVTSS-----------FDCGKPKVEPKKCPARVVGGCVSIPHSWPWQISLRYRYRG 326
+ +C + C K K RVV G + + W +SL+YR +
Sbjct: 465 PISRCEGDTTPTIVNLDHPVISCAKTK------QLRVVNG-IPTRTNVGWMVSLKYRNK- 516
Query: 327 HFCGGTLISPEWVLTAKHCL-EKSSSPSSYKVILGAHEEHRLGEGV--QEIDVSKLFKEP 497
H CGG+LI W+LTA+ C ++ Y+ LG H+ H G+ Q ++V++L P
Sbjct: 517 HICGGSLIKESWILTARQCFPSRNKDLKDYEAWLGIHDVHGRGDEKRKQVLNVTQLVYGP 576
Query: 498 SGADIALLKLSSPAVITDKVIPACLPTPNYVVADRTACYITGWGETKGTYGAGLLKEARL 677
G+D+ LLKL+ PA++ D V LP + ++T C + GWG T GLL+ A L
Sbjct: 577 EGSDLVLLKLARPAILDDFVSTIDLPNYGCTIPEKTTCSVYGWGYTGLINSDGLLRVAHL 636
Query: 678 PVIENKVCNRYEYLDGKVSSKELCAGHLAGGIDSCQGDSGGPLVCFEKDKYILQGVTSWG 857
++ N+ C++Y ++ E+CAG C+GD GGPLVC + ++ GV G
Sbjct: 637 YIMGNEKCSQYHQGKVTLNESEICAGAENIVSGPCEGDYGGPLVCEQHKMRMVLGVIVPG 696
Query: 858 LGCALPNKPGVCVRVSRFVTWIEEIM 935
GCA+PN+PG+ VRV+ + WI +I+
Sbjct: 697 RGCAIPNRPGIFVRVAYYAKWIHKII 722
Score = 82.0 bits (201), Expect = 8e-16
Identities = 32/70 (45%), Positives = 47/70 (67%)
Frame = +3
Query: 6 AGVPCQEWAAQEPHRHSIFTPGTNPRAGLEKNYCRNPDGDDNGPWCYTTNPQKLFDYCDV 185
+G+ CQ W + PH HS F P + L++NYCRNP G++ GPWC+T+NP+ ++ CD+
Sbjct: 145 SGIKCQPWNSMIPHEHS-FLPSSYRGKDLQENYCRNPRGEEGGPWCFTSNPEVRYEVCDI 203
Query: 186 PQCVTSSFDC 215
PQC S +C
Sbjct: 204 PQC--SEVEC 211
Score = 73.9 bits (180), Expect = 2e-13
Identities = 35/71 (49%), Positives = 46/71 (64%), Gaps = 2/71 (2%)
Frame = +3
Query: 9 GVPCQEWAAQEPHRHSIFTPGTNPRAGLEKNYCRNPDGDDNGPWCYTTNPQKLFDYC-DV 185
G+PCQ W +Q PH+H I TP L +NYCRNPDG ++ PWC+TT+P YC +
Sbjct: 323 GIPCQRWDSQYPHQHDI-TPENFKCKDLRENYCRNPDGAES-PWCFTTDPNIRVGYCSQI 380
Query: 186 PQC-VTSSFDC 215
P+C V+S DC
Sbjct: 381 PKCDVSSGQDC 391
Score = 71.2 bits (173), Expect = 1e-12
Identities = 32/79 (40%), Positives = 42/79 (53%)
Frame = +3
Query: 9 GVPCQEWAAQEPHRHSIFTPGTNPRAGLEKNYCRNPDGDDNGPWCYTTNPQKLFDYCDVP 188
G CQ W Q PHRH F P P G + NYCRNPDG PWCYT +P ++YC +
Sbjct: 229 GKICQRWDHQTPHRHK-FLPERYPDKGFDDNYCRNPDGKPR-PWCYTLDPDTPWEYCAIK 286
Query: 189 QCVTSSFDCGKPKVEPKKC 245
C S+ + ++ +C
Sbjct: 287 MCAHSTMNDTDLPMQTTEC 305
>ref|XP_874086.1| PREDICTED: hepatocyte growth factor [Bos taurus]
Length = 697
Score = 209 bits (531), Expect = 5e-54
Identities = 117/326 (35%), Positives = 173/326 (53%), Gaps = 16/326 (4%)
Frame = +3
Query: 6 AGVPCQEWAA--QEPHRHSIFTPGTNPRAGLEKNYCRNPDGDDNGPWCYTTNPQKLFDYC 179
+G+ C W ++ HRH + P L KNYCRNPD D +GPWCYT NP +DYC
Sbjct: 375 SGLTCSMWDKNMEDLHRHIFWEPDATK---LNKNYCRNPDDDAHGPWCYTGNPLIPWDYC 431
Query: 180 DVPQCVTSS-----------FDCGKPKVEPKKCPARVVGGCVSIPHSWPWQISLRYRYRG 326
+ +C + C K K RVV G + + W +SL+YR +
Sbjct: 432 PISRCEGDTTPTIVNLDHPVISCAKTK------QLRVVNG-IPTRTNVGWMVSLKYRNK- 483
Query: 327 HFCGGTLISPEWVLTAKHCL-EKSSSPSSYKVILGAHEEHRLGEGV--QEIDVSKLFKEP 497
H CGG+LI W+LTA+ C ++ Y+ LG H+ H G+ Q ++V++L P
Sbjct: 484 HICGGSLIKESWILTARQCFPSRNKDLKDYEAWLGIHDVHGRGDEKRKQVLNVTQLVYGP 543
Query: 498 SGADIALLKLSSPAVITDKVIPACLPTPNYVVADRTACYITGWGETKGTYGAGLLKEARL 677
G+D+ LLKL+ PA++ D V LP + ++T C + GWG T GLL+ A L
Sbjct: 544 EGSDLVLLKLARPAILDDFVSTIDLPNYGCTIPEKTTCSVYGWGYTGLINSDGLLRVAHL 603
Query: 678 PVIENKVCNRYEYLDGKVSSKELCAGHLAGGIDSCQGDSGGPLVCFEKDKYILQGVTSWG 857
++ N+ C++Y ++ E+CAG C+GD GGPLVC + ++ GV G
Sbjct: 604 YIMGNEKCSQYHQGKVTLNESEICAGAENIVSGPCEGDYGGPLVCEQHKMRMVLGVIVPG 663
Query: 858 LGCALPNKPGVCVRVSRFVTWIEEIM 935
GCA+PN+PG+ VRV+ + WI +I+
Sbjct: 664 RGCAIPNRPGIFVRVAYYAKWIHKII 689
Score = 82.0 bits (201), Expect = 8e-16
Identities = 32/70 (45%), Positives = 47/70 (67%)
Frame = +3
Query: 6 AGVPCQEWAAQEPHRHSIFTPGTNPRAGLEKNYCRNPDGDDNGPWCYTTNPQKLFDYCDV 185
+G+ CQ W + PH HS F P + L++NYCRNP G++ GPWC+T+NP+ ++ CD+
Sbjct: 112 SGIKCQPWNSMIPHEHS-FLPSSYRGKDLQENYCRNPRGEEGGPWCFTSNPEVRYEVCDI 170
Query: 186 PQCVTSSFDC 215
PQC S +C
Sbjct: 171 PQC--SEVEC 178
Score = 73.9 bits (180), Expect = 2e-13
Identities = 35/71 (49%), Positives = 46/71 (64%), Gaps = 2/71 (2%)
Frame = +3
Query: 9 GVPCQEWAAQEPHRHSIFTPGTNPRAGLEKNYCRNPDGDDNGPWCYTTNPQKLFDYC-DV 185
G+PCQ W +Q PH+H I TP L +NYCRNPDG ++ PWC+TT+P YC +
Sbjct: 290 GIPCQRWDSQYPHQHDI-TPENFKCKDLRENYCRNPDGAES-PWCFTTDPNIRVGYCSQI 347
Query: 186 PQC-VTSSFDC 215
P+C V+S DC
Sbjct: 348 PKCDVSSGQDC 358
Score = 71.2 bits (173), Expect = 1e-12
Identities = 32/79 (40%), Positives = 42/79 (53%)
Frame = +3
Query: 9 GVPCQEWAAQEPHRHSIFTPGTNPRAGLEKNYCRNPDGDDNGPWCYTTNPQKLFDYCDVP 188
G CQ W Q PHRH F P P G + NYCRNPDG PWCYT +P ++YC +
Sbjct: 196 GKICQRWDHQTPHRHK-FLPERYPDKGFDDNYCRNPDGKPR-PWCYTLDPDTPWEYCAIK 253
Query: 189 QCVTSSFDCGKPKVEPKKC 245
C S+ + ++ +C
Sbjct: 254 MCAHSTMNDTDLPMQTTEC 272
>ref|XP_886646.1| PREDICTED: similar to Serine protease hepsin (Transmembrane protease,
serine 1) isoform 3 [Bos taurus]
Length = 434
Score = 196 bits (498), Expect = 3e-50
Identities = 131/359 (36%), Positives = 186/359 (51%), Gaps = 29/359 (8%)
Frame = +3
Query: 3 VAGVPCQEWA---AQEPHRHSIFTPGTNPRAGLEKNYCRNPDGDDNGPWCYTTNPQKLFD 173
VAG+ C+E A + + T G N +G +C D G + ++
Sbjct: 85 VAGLSCEEMGFLRALDFSELDVRTAGANGTSGF---FCV-----DEGRLPHARRLLEVLS 136
Query: 174 YCDVPQ---CVTSSFDCGKPKVEPKKCPARVVGGCVSIPHSWPWQISLRYRYRGHFCGGT 344
CD P+ TS DCG K+ R+VGG + WPWQ+SLRY H CGG+
Sbjct: 137 VCDCPRGRFLATSCQDCGHRKLPVD----RIVGGQDTSLGRWPWQVSLRYD-GAHLCGGS 191
Query: 345 LISPEWVLTAKHCL-EKSSSPSSYKVILGAHEE---HRLGEGVQEIDVSK---LFKEPSG 503
++S +WVLTA HC E++ S ++V GA + H + GVQ + F++P+
Sbjct: 192 VLSRDWVLTAAHCFPERNRVLSRWRVFAGAVAQTSPHGVQLGVQAVIYHGGYLPFRDPNS 251
Query: 504 A----DIALLKLSSPAVITDKVIPACLPTPNYVVADRTACYITGWGETKGTYG--AGLLK 665
DIAL+ LS +T+ + P CLP + D C +TGWG T+ YG AG+L+
Sbjct: 252 EENSNDIALVHLSGTLPLTEYIQPVCLPAAGQALVDGKICTVTGWGNTQ-YYGQQAGVLQ 310
Query: 666 EARLPVIENKVCNRYEYLDGKVSSKELCAGHLAGGIDSCQGDSGGPLVCFEK----DKYI 833
EAR+P+I N VCN ++ ++ K CAG+ GGID+CQGDSGGP VC + ++
Sbjct: 311 EARVPIISNDVCNGPDFYGNQIKPKMFCAGYPEGGIDACQGDSGGPFVCEDSISRTPRWR 370
Query: 834 LQGVTSWGLGCALPNKPGVCVRVSRFVTWIEEIM------RRN*SDGKQREVSRDLEAG 992
L G+ SWG GCAL KPGV +VS F WI + + R G+ + R+ EAG
Sbjct: 371 LCGIVSWGTGCALAQKPGVYTKVSDFREWIFQAIKVKFEPRWEPEGGRVWDSEREREAG 429
>ref|XP_584887.2| PREDICTED: similar to Serine protease hepsin (Transmembrane protease,
serine 1) isoform 2 [Bos taurus]
Length = 417
Score = 196 bits (497), Expect = 4e-50
Identities = 125/335 (37%), Positives = 178/335 (53%), Gaps = 23/335 (6%)
Frame = +3
Query: 3 VAGVPCQEWA---AQEPHRHSIFTPGTNPRAGLEKNYCRNPDGDDNGPWCYTTNPQKLFD 173
VAG+ C+E A + + T G N +G +C D G + ++
Sbjct: 85 VAGLSCEEMGFLRALDFSELDVRTAGANGTSGF---FCV-----DEGRLPHARRLLEVLS 136
Query: 174 YCDVPQ---CVTSSFDCGKPKVEPKKCPARVVGGCVSIPHSWPWQISLRYRYRGHFCGGT 344
CD P+ TS DCG K+ R+VGG + WPWQ+SLRY H CGG+
Sbjct: 137 VCDCPRGRFLATSCQDCGHRKLPVD----RIVGGQDTSLGRWPWQVSLRYD-GAHLCGGS 191
Query: 345 LISPEWVLTAKHCL-EKSSSPSSYKVILGAHEE---HRLGEGVQEIDVSK---LFKEPSG 503
++S +WVLTA HC E++ S ++V GA + H + GVQ + F++P+
Sbjct: 192 VLSRDWVLTAAHCFPERNRVLSRWRVFAGAVAQTSPHGVQLGVQAVIYHGGYLPFRDPNS 251
Query: 504 A----DIALLKLSSPAVITDKVIPACLPTPNYVVADRTACYITGWGETKGTYG--AGLLK 665
DIAL+ LS +T+ + P CLP + D C +TGWG T+ YG AG+L+
Sbjct: 252 EENSNDIALVHLSGTLPLTEYIQPVCLPAAGQALVDGKICTVTGWGNTQ-YYGQQAGVLQ 310
Query: 666 EARLPVIENKVCNRYEYLDGKVSSKELCAGHLAGGIDSCQGDSGGPLVCFEK----DKYI 833
EAR+P+I N VCN ++ ++ K CAG+ GGID+CQGDSGGP VC + ++
Sbjct: 311 EARVPIISNDVCNGPDFYGNQIKPKMFCAGYPEGGIDACQGDSGGPFVCEDSISRTPRWR 370
Query: 834 LQGVTSWGLGCALPNKPGVCVRVSRFVTWIEEIMR 938
L G+ SWG GCAL KPGV +VS F WI + ++
Sbjct: 371 LCGIVSWGTGCALAQKPGVYTKVSDFREWIFQAIK 405
>ref|XP_618102.2| PREDICTED: similar to Transmembrane protease, serine 3 [Bos taurus]
Length = 787
Score = 187 bits (474), Expect = 2e-47
Identities = 101/235 (42%), Positives = 137/235 (58%), Gaps = 7/235 (2%)
Frame = +3
Query: 252 RVVGGCVSIPHSWPWQISLRYRYRGHFCGGTLISPEWVLTAKHCLEKSSSPSSYKV---- 419
R+VGG S WPWQ SL+++ H CGG++I+P WV+TA HC+ P S+ +
Sbjct: 250 RIVGGNTSSLAQWPWQASLQFQGY-HLCGGSVITPLWVVTAAHCVYDLYLPKSWTIQVGL 308
Query: 420 --ILGAHEEHRLGEGVQEIDVSKLFKEPSGADIALLKLSSPAVITDKVIPACLPTPNYVV 593
+L + L E + I SK + G DIAL+KL+ P + P CLP
Sbjct: 309 VSLLDSPAPSHLVEKI--IYHSKYKPKRLGNDIALMKLAGPVTFNEMTQPVCLPNSEENF 366
Query: 594 ADRTACYITGWGETK-GTYGAGLLKEARLPVIENKVCNRYEYLDGKVSSKELCAGHLAGG 770
D C+ +GWG T+ G + +L A +P+I NKVCN + G +S LCAG+L GG
Sbjct: 367 PDGKLCWTSGWGATEDGGDASPVLNHAAVPLISNKVCNHRDVYGGIISPSMLCAGYLKGG 426
Query: 771 IDSCQGDSGGPLVCFEKDKYILQGVTSWGLGCALPNKPGVCVRVSRFVTWIEEIM 935
+DSCQGDSGGPLVC E+ + L G TS+G+GCA NKPGV R++ F+ WI E M
Sbjct: 427 VDSCQGDSGGPLVCQERRVWKLVGATSFGIGCAEVNKPGVYTRITSFLDWIHEQM 481
>ref|NP_001014868.1| hyaluronan binding protein 2 [Bos taurus]
Length = 558
Score = 186 bits (472), Expect = 3e-47
Identities = 120/325 (36%), Positives = 164/325 (50%), Gaps = 42/325 (12%)
Frame = +3
Query: 93 EKNYCRNPDGDDNGPWCY--TTNPQKLFDYCDVPQCVTSSFD------------------ 212
E N+CRNPDGD PWC+ N + ++YCDVP C S+ D
Sbjct: 240 EHNFCRNPDGDKK-PWCFIKVNNVKVKWEYCDVPAC--SALDVANPEGRPTEPLTKFPEF 296
Query: 213 --CGKPKVEPKKCPARVVGGCVSIPHSWPWQISLRYRYR-------GHFCGGTLISPEWV 365
CG+ ++ KK R+ GG S PWQ SL+ R GH+CGG LI P WV
Sbjct: 297 GSCGRTEIAEKKVK-RIFGGFKSTAGKHPWQASLQTSLRLTVSTPQGHYCGGALIHPCWV 355
Query: 366 LTAKHCLEKSSSPSSYKVILGAHEEHRLGEGVQEIDVSKLFK--------EPSGADIALL 521
LTA HC E + KV+LG + + Q V K+FK + DIALL
Sbjct: 356 LTAAHCTEIKTK--YLKVVLGDQDLTKTEFHEQSFGVQKIFKYSHYIEIDDIPYNDIALL 413
Query: 522 KLSSP----AVITDKVIPACLPTPNYVVADRTACYITGWGETKGTYGAGLLKEARLPVIE 689
KL A+ + V CLP ++ T CYI+GWG T+ G+ L +A++ +I
Sbjct: 414 KLKPVDGHCALESKYVKTVCLPDGPFLSG--TECYISGWGVTETGEGSRHLLDAKVKLIS 471
Query: 690 NKVCNRYEYLDGKVSSKELCAGHL-AGGIDSCQGDSGGPLVCFEKDKYILQGVTSWGLGC 866
N +CN + D + +CAG+L G DSCQGDSGGPL C + + G+ SWGL C
Sbjct: 472 NTICNSRQLYDHSIDDNMICAGNLQKPGQDSCQGDSGGPLTCEKDGTSYIYGIVSWGLEC 531
Query: 867 ALPNKPGVCVRVSRFVTWIEEIMRR 941
+PGV +V++F+TWI+ M +
Sbjct: 532 G--KRPGVYTQVTKFLTWIKATMEK 554
>ref|XP_607560.2| PREDICTED: similar to Transmembrane protease, serine 13 (Mosaic
serine protease) (Membrane-type mosaic serine protease)
[Bos taurus]
Length = 683
Score = 186 bits (472), Expect = 3e-47
Identities = 96/231 (41%), Positives = 134/231 (58%), Gaps = 7/231 (3%)
Frame = +3
Query: 252 RVVGGCVSIPHSWPWQISLRYRYRGHFCGGTLISPEWVLTAKHC--LEKSSSPSSYKVIL 425
R+VGG + WPWQ+SL++ R H CGGTLI +W+LTA HC + + +KV +
Sbjct: 396 RIVGGARAPESKWPWQVSLQFS-RTHICGGTLIDAQWILTAAHCFFITREKILEGWKVYV 454
Query: 426 GAHEEHRLGEGVQEIDV---SKLFKEPSGADIALLKLSSPAVITDKVIPACLPTPNYVVA 596
G ++ H L E + S + DIAL++LS P ++ V PACLP
Sbjct: 455 GTNDLHHLPESASVAQIIINSNYSDDQDDYDIALMRLSKPLTLSAHVHPACLPMHGQTFG 514
Query: 597 DRTACYITGWGETKGT--YGAGLLKEARLPVIENKVCNRYEYLDGKVSSKELCAGHLAGG 770
C+ITG+G+TK T + L+E ++ +I+ K CN Y D ++ + +CAG L GG
Sbjct: 515 LNEICWITGFGKTKETDERTSPFLREVQVNLIDFKKCNDYLVYDSYLTPRMMCAGDLRGG 574
Query: 771 IDSCQGDSGGPLVCFEKDKYILQGVTSWGLGCALPNKPGVCVRVSRFVTWI 923
DSCQGDSGGPLVC + ++ L GVTSWG GC NKPGV +V+ + WI
Sbjct: 575 RDSCQGDSGGPLVCEQNGRWYLAGVTSWGTGCGQRNKPGVYTKVTEVLPWI 625
>ref|XP_607216.2| PREDICTED: similar to protease, serine, 33 [Bos taurus]
Length = 369
Score = 182 bits (463), Expect = 4e-46
Identities = 107/277 (38%), Positives = 149/277 (53%), Gaps = 18/277 (6%)
Frame = +3
Query: 150 TNPQKLFDYCDVPQCVTSSFDCGKPKVEPKKCPARVVGGCVSIPHSWPWQISLRYRYRGH 329
T PQ C P +S CG+P+V +R+VGG + WPWQ S+++R H
Sbjct: 15 TAPQACLAGCYGPSS-SSGPTCGQPRVS-----SRIVGGRDARAGEWPWQASIQHR-GAH 67
Query: 330 FCGGTLISPEWVLTAKHCLEKSSSPSSYKVILGAHEEHRLGEGVQEIDVSKLFKEPS--- 500
CGG+LI+P+WVLTA HC + + P+ Y+V LGA V ++ P
Sbjct: 68 VCGGSLIAPQWVLTAAHCFPRKALPADYRVRLGAPHLGPSSPPALLAPVRRVLLPPDYSE 127
Query: 501 -GA--DIALLKLSSPAVITDKVIPACLPTPNYVVADRTACYITGWGETKGTYGAGL---- 659
GA D+ALL L P ++ +V P CLP P T C++TGWG + G L
Sbjct: 128 DGAHGDLALLLLRRPTPLSTRVQPVCLPEPGARPPPGTPCWVTGWGSLRP--GVPLPEWR 185
Query: 660 -LKEARLPVIENKVCNRYEYLDGKVSSKE-------LCAGHLAGGIDSCQGDSGGPLVCF 815
L+ R+P+++ C+ +L V E LCAG++ G D+CQGDSGGPLVC
Sbjct: 186 PLQGVRVPLLDAHTCDHLYHLGTDVPRAEHIVLPGSLCAGYVGGQKDACQGDSGGPLVCM 245
Query: 816 EKDKYILQGVTSWGLGCALPNKPGVCVRVSRFVTWIE 926
+ ++IL GV SWG GCALPN+PGV V+ + WI+
Sbjct: 246 KSGRWILVGVVSWGKGCALPNRPGVYTNVATYSPWIQ 282
Database: RefSeqBP
Posted date: Aug 1, 2006 7:14 PM
Number of letters in database: 16,112,626
Number of sequences in database: 33,508
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 47,088,963
Number of Sequences: 33508
Number of extensions: 1326064
Number of successful extensions: 4588
Number of sequences better than 1.0e-05: 10
Number of HSP's better than 0.0 without gapping: 3534
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4109
length of database: 16,112,626
effective HSP length: 104
effective length of database: 12,627,794
effective search space used: 3775710406
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
Search to RefSeqCP
BLASTX 2.2.10 [Oct-19-2004]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= LVR01_0062_H12
(1212 letters)
Database: RefSeqCP
33,732 sequences; 19,266,565 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_533468.2| PREDICTED: similar to Plasminogen precursor [Ca... 575 e-164
Alignment gi|XP_541884.2| PREDICTED: similar to macrophage stimulating 1 ... 248 8e-66
Alignment gi|NP_001002964.1| hepatocyte growth factor [Canis familiaris] 209 3e-54
Alignment gi|XP_541697.2| PREDICTED: similar to Serine protease hepsin (T... 202 7e-52
Alignment gi|XP_539955.2| PREDICTED: similar to Tissue-type plasminogen a... 189 6e-48
Alignment gi|XP_853682.1| PREDICTED: similar to Transmembrane protease, s... 188 8e-48
Alignment gi|XP_861679.1| PREDICTED: similar to Chymotrypsinogen B precur... 183 3e-46
Alignment gi|XP_852957.1| PREDICTED: similar to Chymotrypsinogen B precur... 182 4e-46
Alignment gi|XP_536781.2| PREDICTED: similar to Chymotrypsinogen B precur... 181 2e-45
Alignment gi|XP_535016.2| PREDICTED: similar to hyaluronan binding protei... 179 6e-45
>ref|XP_533468.2| PREDICTED: similar to Plasminogen precursor [Canis familiaris]
Length = 812
Score = 575 bits (1482), Expect = e-164
Identities = 267/314 (85%), Positives = 284/314 (90%)
Frame = +3
Query: 3 VAGVPCQEWAAQEPHRHSIFTPGTNPRAGLEKNYCRNPDGDDNGPWCYTTNPQKLFDYCD 182
V G+PCQEWAAQEPHRHSIFTP TNP+AGLEKNYCRNPDGD NGPWCYT N +KLFDYCD
Sbjct: 499 VMGIPCQEWAAQEPHRHSIFTPETNPQAGLEKNYCRNPDGDVNGPWCYTMNQRKLFDYCD 558
Query: 183 VPQCVTSSFDCGKPKVEPKKCPARVVGGCVSIPHSWPWQISLRYRYRGHFCGGTLISPEW 362
VPQCV++SFDCGKP+VEPKKCP RVVGGCV+ PHSWPWQISLR RY HFCGGTLISPEW
Sbjct: 559 VPQCVSTSFDCGKPQVEPKKCPGRVVGGCVANPHSWPWQISLRTRYGKHFCGGTLISPEW 618
Query: 363 VLTAKHCLEKSSSPSSYKVILGAHEEHRLGEGVQEIDVSKLFKEPSGADIALLKLSSPAV 542
VLTA HCLE+SS P+SYKVILGAH+E L VQEI+V KLF EP+ ADIALLKLSSPAV
Sbjct: 619 VLTAAHCLERSSRPASYKVILGAHKEVNLESDVQEIEVYKLFLEPTRADIALLKLSSPAV 678
Query: 543 ITDKVIPACLPTPNYVVADRTACYITGWGETKGTYGAGLLKEARLPVIENKVCNRYEYLD 722
IT KVIPACLP PNYVVADRT CYITGWGET+GTYGAGLLKEA+LPVIENKVCNRYEYL+
Sbjct: 679 ITSKVIPACLPPPNYVVADRTLCYITGWGETQGTYGAGLLKEAQLPVIENKVCNRYEYLN 738
Query: 723 GKVSSKELCAGHLAGGIDSCQGDSGGPLVCFEKDKYILQGVTSWGLGCALPNKPGVCVRV 902
G+V S ELCAG+LAGG DSCQGDSGGPLVCFEKDKYILQGVTSWGLGCA PNKPGV VRV
Sbjct: 739 GRVKSTELCAGNLAGGTDSCQGDSGGPLVCFEKDKYILQGVTSWGLGCARPNKPGVYVRV 798
Query: 903 SRFVTWIEEIMRRN 944
SRFVTWIE IMR N
Sbjct: 799 SRFVTWIEGIMRNN 812
Score = 97.8 bits (242), Expect = 2e-20
Identities = 39/76 (51%), Positives = 50/76 (65%)
Frame = +3
Query: 12 VPCQEWAAQEPHRHSIFTPGTNPRAGLEKNYCRNPDGDDNGPWCYTTNPQKLFDYCDVPQ 191
V CQ+W+ PH+ + +TP +P GLE+NYCRNPD D+NGPWCYTTNP FDYC++P+
Sbjct: 122 VACQKWSDNSPHKPN-YTPEKHPLEGLEENYCRNPDNDENGPWCYTTNPDVRFDYCNIPE 180
Query: 192 CVTSSFDCGKPKVEPK 239
C C E K
Sbjct: 181 CEEECMHCSGENYEGK 196
Score = 78.6 bits (192), Expect = 1e-14
Identities = 35/86 (40%), Positives = 52/86 (60%), Gaps = 4/86 (4%)
Frame = +3
Query: 3 VAGVPCQEWAAQEPHRHSIFTPGTNPRAGLEKNYCRNPDGDDNGPWCYTTNPQKLFDYCD 182
V+G CQ W+ Q PH+H+ TP P L++NYCRNPDG+ PWCYTTN + +++C
Sbjct: 291 VSGHTCQHWSEQTPHKHNR-TPENFPCKNLDENYCRNPDGE-TAPWCYTTNSEVRWEHCQ 348
Query: 183 VPQC----VTSSFDCGKPKVEPKKCP 248
+P C +T+ + V P++ P
Sbjct: 349 IPSCESSPITTEYLDAPASVPPEQTP 374
Score = 77.8 bits (190), Expect = 2e-14
Identities = 30/65 (46%), Positives = 43/65 (66%)
Frame = +3
Query: 6 AGVPCQEWAAQEPHRHSIFTPGTNPRAGLEKNYCRNPDGDDNGPWCYTTNPQKLFDYCDV 185
+G+ CQ W +Q PH H + P P L+ NYCRNPDG+ PWC+T +P K +++CD+
Sbjct: 202 SGLECQAWNSQTPHAHG-YIPSKFPSKNLKMNYCRNPDGEPR-PWCFTMDPNKRWEFCDI 259
Query: 186 PQCVT 200
P+C T
Sbjct: 260 PRCTT 264
Score = 74.7 bits (182), Expect = 2e-13
Identities = 31/65 (47%), Positives = 43/65 (66%)
Frame = +3
Query: 3 VAGVPCQEWAAQEPHRHSIFTPGTNPRAGLEKNYCRNPDGDDNGPWCYTTNPQKLFDYCD 182
+ G CQ W++ PHRH TP P AGL NYCRNPD D + PWCYTT+P +++C+
Sbjct: 395 ITGRKCQSWSSMTPHRHEK-TPEHFPEAGLTMNYCRNPDADKS-PWCYTTDPSVRWEFCN 452
Query: 183 VPQCV 197
+ +C+
Sbjct: 453 LRKCL 457
>ref|XP_541884.2| PREDICTED: similar to macrophage stimulating 1 (hepatocyte growth
factor-like) [Canis familiaris]
Length = 712
Score = 248 bits (633), Expect = 8e-66
Identities = 137/328 (41%), Positives = 185/328 (56%), Gaps = 18/328 (5%)
Frame = +3
Query: 9 GVPCQEWAAQEPHRHSIFTPGTNPRAGLEKNYCRNPDGDDNGPWCYTTNPQKLFDYC--- 179
GVPCQ W+A+ PH+ FT + P A LE+N+CRNPD D +GPWCYTT+P FDYC
Sbjct: 389 GVPCQHWSAEMPHKPQ-FTAISAPDAHLEENFCRNPDRDSHGPWCYTTDPGTPFDYCALR 447
Query: 180 ----DVPQCVTSSFD------CGK--PKVEPKKCPARVVGGCVSIPHSWPWQISLRYRYR 323
D P + D CGK +++ ++ RVVGG P + PW +SLR R
Sbjct: 448 RCDDDQPPSILEPPDQVVFEKCGKRVTRLDQQRSKLRVVGGQ---PGNSPWTVSLRNRQG 504
Query: 324 GHFCGGTLISPEWVLTAKHCLEKSSSP-SSYKVILGA-HEEHRLGE-GVQEIDVSKLFKE 494
HFCGG+L+ +WVLTA+ C P Y+V LG + + GE G+Q+I V+K+
Sbjct: 505 QHFCGGSLVKEQWVLTARQCFSSCHVPLMGYEVWLGTLFQNPQPGEPGLQQIPVAKMVCG 564
Query: 495 PSGADIALLKLSSPAVITDKVIPACLPTPNYVVADRTACYITGWGETKGTYGAGLLKEAR 674
PSG+ + LLKL P + +V CLP YVV T C I GWGETKGT +L A
Sbjct: 565 PSGSQLVLLKLERPVTLNQRVALICLPPERYVVPPGTKCEIAGWGETKGTGNNKVLNVAS 624
Query: 675 LPVIENKVCNRYEYLDGKVSSKELCAGHLAGGIDSCQGDSGGPLVCFEKDKYILQGVTSW 854
L VI N+ CN G++ E+C L + +C+GD GGPL CF D ++L+G+
Sbjct: 625 LNVISNQECNIKH--RGRIRENEMCTEGLLAPVGACEGDYGGPLACFTHDCWVLEGIIIP 682
Query: 855 GLGCALPNKPGVCVRVSRFVTWIEEIMR 938
CA P P + +RVS F WI ++M+
Sbjct: 683 NRVCARPRWPAIFMRVSVFTDWIHKVMQ 710
Score = 72.8 bits (177), Expect = 6e-13
Identities = 31/62 (50%), Positives = 40/62 (64%)
Frame = +3
Query: 9 GVPCQEWAAQEPHRHSIFTPGTNPRAGLEKNYCRNPDGDDNGPWCYTTNPQKLFDYCDVP 188
G+PCQ W+ + P+ H +TP R GLE+N+CRNPD D GPWCYTT+P F C +
Sbjct: 129 GLPCQHWSHRFPNDHK-YTPTL--RNGLEENFCRNPDRDPGGPWCYTTDPAVRFQSCGIK 185
Query: 189 QC 194
C
Sbjct: 186 SC 187
Score = 70.9 bits (172), Expect = 2e-12
Identities = 31/63 (49%), Positives = 39/63 (61%)
Frame = +3
Query: 6 AGVPCQEWAAQEPHRHSIFTPGTNPRAGLEKNYCRNPDGDDNGPWCYTTNPQKLFDYCDV 185
+G CQ W Q PH H F PG L+ NYCRNPDG + PWCYTT+PQ ++CD+
Sbjct: 209 SGRECQRWDLQHPHAHP-FEPGKFLDKDLDDNYCRNPDGSER-PWCYTTDPQVEREFCDL 266
Query: 186 PQC 194
+C
Sbjct: 267 TRC 269
Score = 68.2 bits (165), Expect = 2e-11
Identities = 30/64 (46%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
Frame = +3
Query: 6 AGVPCQEWAAQEPHRHSIFTPGTNPRAGLEKNYCRNPDGDDNGPWCYTTNPQKLFDYC-D 182
AGVPCQ W AQ+PH+H F P L +N+CRNPDG + PWC+T+ P +C
Sbjct: 301 AGVPCQRWDAQKPHQHR-FAPEKYACKDLRENFCRNPDGSE-APWCFTSRPGMRVAFCYQ 358
Query: 183 VPQC 194
+P+C
Sbjct: 359 IPRC 362
>ref|NP_001002964.1| hepatocyte growth factor [Canis familiaris]
Length = 730
Score = 209 bits (533), Expect = 3e-54
Identities = 118/326 (36%), Positives = 174/326 (53%), Gaps = 16/326 (4%)
Frame = +3
Query: 6 AGVPCQEWAA--QEPHRHSIFTPGTNPRAGLEKNYCRNPDGDDNGPWCYTTNPQKLFDYC 179
+G+ C W ++ HRH + P + L KNYCRNPD D +GPWCYT NP +DYC
Sbjct: 408 SGLTCSMWEKNMEDLHRHIFWEPDASK---LNKNYCRNPDDDAHGPWCYTGNPLIPWDYC 464
Query: 180 DVPQCVTSS-----------FDCGKPKVEPKKCPARVVGGCVSIPHSWPWQISLRYRYRG 326
+ +C + C K K RVV G + + W +SL+YR +
Sbjct: 465 PIFRCEGDTTPTIVNLDHPVISCAKTK------QLRVVNG-IPTRTNVGWMVSLKYRNK- 516
Query: 327 HFCGGTLISPEWVLTAKHCL-EKSSSPSSYKVILGAHEEHRLGEGV--QEIDVSKLFKEP 497
H CGG+LI W+LTA+ C ++ Y+ LG H+ H G+ Q ++VS+L P
Sbjct: 517 HICGGSLIKESWILTARQCFPSRNRDLKDYEAWLGIHDVHGKGDEKRKQVLNVSQLVYGP 576
Query: 498 SGADIALLKLSSPAVITDKVIPACLPTPNYVVADRTACYITGWGETKGTYGAGLLKEARL 677
G+D+ LLKL+ PA++ D V LP + ++T C + GWG T GLL+ A L
Sbjct: 577 EGSDLVLLKLARPAILDDFVSTIDLPNYGCTIPEKTTCSVYGWGYTGSINFDGLLRVAHL 636
Query: 678 PVIENKVCNRYEYLDGKVSSKELCAGHLAGGIDSCQGDSGGPLVCFEKDKYILQGVTSWG 857
++ N+ C++Y ++ E+CAG C+GD GGPLVC + ++ GV G
Sbjct: 637 YIMGNEKCSQYHQGKVTLNESEICAGAENIVSGPCEGDYGGPLVCEQHKMRMVLGVIVPG 696
Query: 858 LGCALPNKPGVCVRVSRFVTWIEEIM 935
GCA+PN+PG+ VRV+ + WI +I+
Sbjct: 697 RGCAIPNRPGIFVRVAYYAKWIHKII 722
Score = 82.0 bits (201), Expect = 1e-15
Identities = 32/70 (45%), Positives = 47/70 (67%)
Frame = +3
Query: 6 AGVPCQEWAAQEPHRHSIFTPGTNPRAGLEKNYCRNPDGDDNGPWCYTTNPQKLFDYCDV 185
+G+ CQ W + PH HS F P + L++NYCRNP G++ GPWC+T+NP+ ++ CD+
Sbjct: 145 SGIKCQPWNSMIPHEHS-FLPSSYRGKDLQENYCRNPRGEEGGPWCFTSNPEVRYEVCDI 203
Query: 186 PQCVTSSFDC 215
PQC S +C
Sbjct: 204 PQC--SEVEC 211
Score = 74.3 bits (181), Expect = 2e-13
Identities = 36/71 (50%), Positives = 46/71 (64%), Gaps = 2/71 (2%)
Frame = +3
Query: 9 GVPCQEWAAQEPHRHSIFTPGTNPRAGLEKNYCRNPDGDDNGPWCYTTNPQKLFDYC-DV 185
GVPCQ W +Q PH+H I TP L +NYCRNPDG ++ PWC+TT+P YC +
Sbjct: 323 GVPCQRWDSQYPHQHDI-TPENFKCKDLRENYCRNPDGAES-PWCFTTDPNIRVGYCSQI 380
Query: 186 PQC-VTSSFDC 215
P+C V+S DC
Sbjct: 381 PKCDVSSGQDC 391
Score = 73.2 bits (178), Expect = 5e-13
Identities = 33/80 (41%), Positives = 43/80 (53%)
Frame = +3
Query: 6 AGVPCQEWAAQEPHRHSIFTPGTNPRAGLEKNYCRNPDGDDNGPWCYTTNPQKLFDYCDV 185
+G CQ W Q PHRH F P P G + NYCRNPDG PWCYT +P ++YC +
Sbjct: 228 SGKICQRWDHQTPHRHK-FLPERYPDKGFDDNYCRNPDGKPR-PWCYTLDPDTPWEYCAI 285
Query: 186 PQCVTSSFDCGKPKVEPKKC 245
C S+ + +E +C
Sbjct: 286 KMCAHSTMNDTDVPMETTEC 305
>ref|XP_541697.2| PREDICTED: similar to Serine protease hepsin (Transmembrane protease,
serine 1) [Canis familiaris]
Length = 417
Score = 202 bits (513), Expect = 7e-52
Identities = 128/335 (38%), Positives = 180/335 (53%), Gaps = 23/335 (6%)
Frame = +3
Query: 3 VAGVPCQEWAAQEPHRHS---IFTPGTNPRAGLEKNYCRNPDGDDNGPWCYTTNPQKLFD 173
VAG+ C+E HS + T G N +G +C D G ++
Sbjct: 85 VAGLSCEEMGFLRALGHSELDVRTAGANGTSGF---FCV-----DEGRLPLARRLLEVIS 136
Query: 174 YCDVPQ---CVTSSFDCGKPKVEPKKCPARVVGGCVSIPHSWPWQISLRYRYRGHFCGGT 344
CD P+ T DCG+ K+ R+VGG + WPWQ+SLRY H CGG+
Sbjct: 137 VCDCPRGRFLATVCQDCGRRKLPVD----RIVGGQDTSLGRWPWQVSLRYD-GAHLCGGS 191
Query: 345 LISPEWVLTAKHCL-EKSSSPSSYKVILGAHEE---HRLGEGVQEIDVSK---LFKEPSG 503
L+S +WVLTA HC E++ S ++V GA + H L GVQ + F++P+
Sbjct: 192 LLSGDWVLTAAHCFPERNRVLSRWRVFAGAVAQASPHGLQLGVQAVVYHGGYLPFRDPNS 251
Query: 504 A----DIALLKLSSPAVITDKVIPACLPTPNYVVADRTACYITGWGETKGTYG--AGLLK 665
DIAL+ LSSP +T+ + P CLP + D C +TGWG T+ YG AG+L+
Sbjct: 252 EENSNDIALVHLSSPLPLTEYIQPVCLPAAGQALVDGKICTVTGWGNTQ-YYGQQAGVLQ 310
Query: 666 EARLPVIENKVCNRYEYLDGKVSSKELCAGHLAGGIDSCQGDSGGPLVCFEK----DKYI 833
EAR+P+I N++CN ++ ++ K CAG+ GGID+CQGDSGGP VC + ++
Sbjct: 311 EARVPIISNELCNGPDFYANQIKPKMFCAGYPEGGIDACQGDSGGPFVCEDSISRTPRWR 370
Query: 834 LQGVTSWGLGCALPNKPGVCVRVSRFVTWIEEIMR 938
L G+ SWG GCAL KPGV +VS F WI + ++
Sbjct: 371 LCGIVSWGTGCALAQKPGVYTKVSDFREWIFQAIK 405
>ref|XP_539955.2| PREDICTED: similar to Tissue-type plasminogen activator precursor
(tPA) (t-PA) (t-plasminogen activator) [Canis familiaris]
Length = 560
Score = 189 bits (479), Expect = 6e-48
Identities = 121/337 (35%), Positives = 173/337 (51%), Gaps = 26/337 (7%)
Frame = +3
Query: 6 AGVPCQEWAAQEPHRHSIFTPGTNPRA-GL-EKNYCRNPDGDDNGPWCYTTNPQKL-FDY 176
+G PC W ++ T TN +A GL NYCRNPDGD PWC+ +KL ++Y
Sbjct: 230 SGTPCLPWNSRVLAGKFYTTWKTNAQALGLGSHNYCRNPDGDAK-PWCHVLKDRKLTWEY 288
Query: 177 CDVPQCVTSSFDCGKPKVEPKKCPARVVGGCVSIPHSWPWQISLRYRYRGH-----FCGG 341
CDVPQC T CG K+ R+ GG + S PWQ ++ + R FCGG
Sbjct: 289 CDVPQCST----CGLRHY--KQPQFRIKGGLYADITSHPWQAAIFVKNRRSPGERFFCGG 342
Query: 342 TLISPEWVLTAKHCLEKSSSPSSYKVILGAHEEHRLGEGVQEIDVSKLFKEPS------G 503
LIS WVL+A HC ++ P KV+LG GE Q+ +V K
Sbjct: 343 ILISSCWVLSAAHCFQERYPPHQLKVVLGRTYREVPGEKEQKFEVEKYITHKEFDDDTYN 402
Query: 504 ADIALLKLSSPAVI----TDKVIPACLPTPNYVVADRTACYITGWG--ETKGTYGAGLLK 665
DIALLKL S ++ +D V ACLP + + D T C ++G+G E + + LK
Sbjct: 403 NDIALLKLQSDSLHCAQESDAVRTACLPEADLQLPDWTECELSGYGKHEASSPFYSERLK 462
Query: 666 EARLPVIENKVCNRYEYLDGKVSSKELCAGHLAGG------IDSCQGDSGGPLVCFEKDK 827
EA + + + C + +++ LCAG G D+CQGDSGGPLVC + ++
Sbjct: 463 EAHVRLYPSSRCTSRHLFNKTITNNMLCAGDTRSGGNQANLHDACQGDSGGPLVCMKDNR 522
Query: 828 YILQGVTSWGLGCALPNKPGVCVRVSRFVTWIEEIMR 938
L G+ SWG+GC + PG+ +V+ ++ WI++ M+
Sbjct: 523 MTLVGIISWGIGCGQKDVPGIYTKVTNYLDWIQDNMQ 559
>ref|XP_853682.1| PREDICTED: similar to Transmembrane protease, serine 3 (Serine
protease TADG-12) (Tumor associated
differentially-expressed gene-12 protein) [Canis
familiaris]
Length = 513
Score = 188 bits (478), Expect = 8e-48
Identities = 106/257 (41%), Positives = 144/257 (56%), Gaps = 16/257 (6%)
Frame = +3
Query: 213 CGKPKVEPKKCPA---------RVVGGCVSIPHSWPWQISLRYRYRGHFCGGTLISPEWV 365
C +V KC A R+VGG S WPWQ SL+++ H CGG++I+P WV
Sbjct: 192 CASGRVVTLKCTACGLRMGYSSRIVGGNASSLTQWPWQASLQFQGY-HLCGGSVITPVWV 250
Query: 366 LTAKHCLEKSSSPSSYKV------ILGAHEEHRLGEGVQEIDVSKLFKEPSGADIALLKL 527
+TA HC+ P S+ V +L + L E + I SK + G DIAL+KL
Sbjct: 251 VTAAHCVYDLYVPKSWTVQVGLVSLLDSPAPSHLVEKI--IYHSKYKPKRLGNDIALMKL 308
Query: 528 SSPAVITDKVIPACLPTPNYVVADRTACYITGWGETK-GTYGAGLLKEARLPVIENKVCN 704
+ P +++ P CLP D C+ +GWG T+ G + L A +P+I NK+CN
Sbjct: 309 AGPVPFNERIQPVCLPNSEENFPDGKMCWTSGWGATEDGGDASPDLNHAAVPLISNKICN 368
Query: 705 RYEYLDGKVSSKELCAGHLAGGIDSCQGDSGGPLVCFEKDKYILQGVTSWGLGCALPNKP 884
+ G +S LCAG+L GG+DSCQGDSGGPLVC E+ + L G TS+G+GCA NKP
Sbjct: 369 HRDVYGGIISPSMLCAGYLKGGVDSCQGDSGGPLVCQERRVWKLVGATSFGIGCADVNKP 428
Query: 885 GVCVRVSRFVTWIEEIM 935
GV R++ F+ WI E M
Sbjct: 429 GVYTRITSFLDWIHEQM 445
>ref|XP_861679.1| PREDICTED: similar to Chymotrypsinogen B precursor isoform 5 [Canis
familiaris]
Length = 264
Score = 183 bits (464), Expect = 3e-46
Identities = 97/257 (37%), Positives = 147/257 (57%), Gaps = 9/257 (3%)
Frame = +3
Query: 201 SSFDCGKPKVEPKKCP-ARVVGGCVSIPHSWPWQISLRYRYRGHFCGGTLISPEWVLTAK 377
++F CG P ++P +R+V G ++P SWPWQ+SL+ HFCGG+LIS +WV+TA
Sbjct: 15 TAFGCGVPAIQPVLSGLSRIVNGEDAVPGSWPWQVSLQDSTGFHFCGGSLISEDWVVTAA 74
Query: 378 HCLEKSSSPSSYKVILGAHEEHRLGEGVQEIDVSKLFKEPS------GADIALLKLSSPA 539
HC S ++++V+ G ++ E +Q + ++K+FK P DI LLKL++PA
Sbjct: 75 HC---GVSTTTHQVVAGEFDQGSDAESIQVLKIAKVFKNPKFNMFTINNDITLLKLATPA 131
Query: 540 VITDKVIPACLPTPNYVVADRTACYITGWGETKGTYG--AGLLKEARLPVIENKVCNRYE 713
+ V CLP T C TGWG TK T L++A LP++ N C ++
Sbjct: 132 RFSKTVSAVCLPQATDDFPAGTLCVTTGWGLTKHTNANTPDKLQQAALPLLSNAECKKF- 190
Query: 714 YLDGKVSSKELCAGHLAGGIDSCQGDSGGPLVCFEKDKYILQGVTSWGLGCALPNKPGVC 893
K++ +CAG A G+ SC GDSGGPLVC + + L G+ SWG G + PGV
Sbjct: 191 -WGSKITDLMVCAG--ASGVSSCMGDSGGPLVCQKDGAWTLVGIVSWGSGTCSTSTPGVY 247
Query: 894 VRVSRFVTWIEEIMRRN 944
RV++ + W+++I++ N
Sbjct: 248 ARVTKLIPWVQQILQAN 264
>ref|XP_852957.1| PREDICTED: similar to Chymotrypsinogen B precursor [Canis
familiaris]
Length = 263
Score = 182 bits (463), Expect = 4e-46
Identities = 97/257 (37%), Positives = 145/257 (56%), Gaps = 9/257 (3%)
Frame = +3
Query: 201 SSFDCGKPKVEPKKCP-ARVVGGCVSIPHSWPWQISLRYRYRGHFCGGTLISPEWVLTAK 377
SS CG P + P+ +R++ G ++P+SWPWQ+SL+ HFCGG+LIS WV+TA
Sbjct: 15 SSSGCGVPAIHPQLSGLSRIINGEDAVPNSWPWQVSLQTSSGFHFCGGSLISQHWVVTAA 74
Query: 378 HCLEKSSSPSSYKVILGAHEEHRLGEGVQEIDVSKLFKEPSGA------DIALLKLSSPA 539
HC + S + V+ G + E VQ + ++++F+ P DIALLKL++PA
Sbjct: 75 HCGVRKS----HLVVAGVSDHSSTEEAVQVLPIAEVFEHPLWGQDLGPYDIALLKLAAPA 130
Query: 540 VITDKVIPACLPTPNYVVADRTACYITGWGETK--GTYGAGLLKEARLPVIENKVCNRYE 713
+++ P CLP N + C TGWG T+ L++A LP++ N C ++
Sbjct: 131 LLSATASPVCLPGANASFPAGSLCATTGWGRTRYNSNKTPDKLQQAALPLLSNAECKKF- 189
Query: 714 YLDGKVSSKELCAGHLAGGIDSCQGDSGGPLVCFEKDKYILQGVTSWGLGCALPNKPGVC 893
K++ +CAG A G+ SC GDSGGPLVC + + L G+ SWG G P+ PGV
Sbjct: 190 -WGSKITDVMICAG--ASGVSSCMGDSGGPLVCQKDGAWTLVGIVSWGSGWCNPSSPGVY 246
Query: 894 VRVSRFVTWIEEIMRRN 944
V++F+ W+ EI+ N
Sbjct: 247 TLVTKFIPWVLEILEAN 263
>ref|XP_536781.2| PREDICTED: similar to Chymotrypsinogen B precursor isoform 3 [Canis
familiaris]
Length = 263
Score = 181 bits (458), Expect = 2e-45
Identities = 96/257 (37%), Positives = 147/257 (57%), Gaps = 9/257 (3%)
Frame = +3
Query: 201 SSFDCGKPKVEPKKCP-ARVVGGCVSIPHSWPWQISLRYRYRGHFCGGTLISPEWVLTAK 377
++F CG P ++P +R+V G ++P SWPWQ+SL+ HFCGG+LIS +WV+TA
Sbjct: 15 TAFGCGVPAIQPVLSGLSRIVNGEDAVPGSWPWQVSLQDSTGFHFCGGSLISEDWVVTAA 74
Query: 378 HCLEKSSSPSSYKVILGAHEEHRLGEGVQEIDVSKLFKEPS------GADIALLKLSSPA 539
HC +++ ++V+ G ++ E +Q + ++K+FK P DI LLKL++PA
Sbjct: 75 HCGVRTT----HQVVAGEFDQGSDAESIQVLKIAKVFKNPKFNMFTINNDITLLKLATPA 130
Query: 540 VITDKVIPACLPTPNYVVADRTACYITGWGETKGTYG--AGLLKEARLPVIENKVCNRYE 713
+ V CLP T C TGWG TK T L++A LP++ N C ++
Sbjct: 131 RFSKTVSAVCLPQATDDFPAGTLCVTTGWGLTKHTNANTPDKLQQAALPLLSNAECKKF- 189
Query: 714 YLDGKVSSKELCAGHLAGGIDSCQGDSGGPLVCFEKDKYILQGVTSWGLGCALPNKPGVC 893
K++ +CAG A G+ SC GDSGGPLVC + + L G+ SWG G + PGV
Sbjct: 190 -WGSKITDLMVCAG--ASGVSSCMGDSGGPLVCQKDGAWTLVGIVSWGSGTCSTSTPGVY 246
Query: 894 VRVSRFVTWIEEIMRRN 944
RV++ + W+++I++ N
Sbjct: 247 ARVTKLIPWVQQILQAN 263
>ref|XP_535016.2| PREDICTED: similar to hyaluronan binding protein 2 [Canis familiaris]
Length = 565
Score = 179 bits (453), Expect = 6e-45
Identities = 119/337 (35%), Positives = 163/337 (48%), Gaps = 40/337 (11%)
Frame = +3
Query: 51 HSIFTPGTNPRAGLEKNYCRNPDGDDNGPWCY--TTNPQKLFDYCDVPQCVTSSFDCGKP 224
++IF E N+CRNPDGD PWC+ N + ++YCDV C S+ D P
Sbjct: 234 YNIFMEDAEAHGIGEHNFCRNPDGDKK-PWCFIKANNAKLKWEYCDVSAC--SALDIADP 290
Query: 225 ------------------KVEPKKCPARVVGGCVSIPHSWPWQISLRYRY-------RGH 329
+ E K R+ GG S PWQ SL+ +GH
Sbjct: 291 EGSLTEPLTKLPGFDSCGRTEMTKKVKRIYGGFKSTAGKHPWQASLQTSLPLTVSMPQGH 350
Query: 330 FCGGTLISPEWVLTAKHCLEKSSSPSSYKVILGAHEEHRLGEGVQEIDVSKLFK------ 491
FCGG LI P WVLTA HC + + V+LG + + Q V K+FK
Sbjct: 351 FCGGALIHPCWVLTAAHCTNIKARHLT--VVLGDQDLKKTEFHEQRFGVEKIFKYSLYNE 408
Query: 492 --EPSGADIALLKLSSP----AVITDKVIPACLPTPNYVVADRTACYITGWGETKGTYGA 653
E DIALLKL A+ + V CLP N T C+I+GWG T+ G+
Sbjct: 409 REEIPHNDIALLKLKPVDGHCALESKYVKTVCLP--NSAFPSGTECHISGWGVTETGEGS 466
Query: 654 GLLKEARLPVIENKVCNRYEYLDGKVSSKELCAGHLAG-GIDSCQGDSGGPLVCFEKDKY 830
L +A++ +I N +CN + D + +CAG+L G DSCQGDSGGPL C + Y
Sbjct: 467 RQLLDAKVRLIANTLCNSRQLYDHMIGDSMICAGNLQKPGQDSCQGDSGGPLTCEKNGTY 526
Query: 831 ILQGVTSWGLGCALPNKPGVCVRVSRFVTWIEEIMRR 941
+ G+ SWGL C KPGV +V++F+ WI+ +++
Sbjct: 527 YVYGIVSWGLECG--KKPGVYTQVAKFLNWIKATIQK 561
Database: RefSeqCP
Posted date: Aug 1, 2006 9:25 PM
Number of letters in database: 19,266,565
Number of sequences in database: 33,732
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 55,111,327
Number of Sequences: 33732
Number of extensions: 1546327
Number of successful extensions: 5367
Number of sequences better than 1.0e-05: 10
Number of HSP's better than 0.0 without gapping: 4073
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4913
length of database: 19,266,565
effective HSP length: 105
effective length of database: 15,724,705
effective search space used: 4685962090
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
Search to RefSeqSP
BLASTX 2.2.10 [Oct-19-2004]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= LVR01_0062_H12
(1212 letters)
Database: RefSeqSP
1040 sequences; 434,620 total letters
Searching...done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001001259.1| enteropeptidase, light chain (L chain) [Sus ... 177 3e-46
Alignment gi|NP_999219.1| T-plasminogen activator [Sus scrofa] 177 3e-46
Alignment gi|NP_999274.1| pancreatic elastase II [Sus scrofa] 175 2e-45
Alignment gi|NP_999356.1| tryptase [Sus scrofa] 174 3e-45
Alignment gi|NP_999239.1| kallikrein [Sus scrofa] 172 1e-44
Alignment gi|NP_999198.1| preproacrosin [Sus scrofa] 162 1e-41
Alignment gi|NP_999110.1| plasminogen activator [Sus scrofa] 162 1e-41
Alignment gi|NP_998959.1| tryptase [Sus scrofa] 160 7e-41
Alignment gi|NP_998988.1| pancreatic elastase I [Sus scrofa] 156 8e-40
Alignment gi|NP_999407.1| factor XII [Sus scrofa] 147 4e-37
>ref|NP_001001259.1| enteropeptidase, light chain (L chain) [Sus scrofa]
Length = 1034
Score = 177 bits (450), Expect = 3e-46
Identities = 103/279 (36%), Positives = 158/279 (56%), Gaps = 10/279 (3%)
Frame = +3
Query: 129 NGPWCYTTNPQKLFDYCDVPQCVTSSFDCGKPKVEPKKCPARVVGGCVSIPHSWPWQISL 308
NG T + Q D + QC S CGK +V + P ++VGG S +WPW ++L
Sbjct: 761 NGSLILTASEQCFEDSLILLQCNHKS--CGKKQVAQEVSP-KIVGGNDSREGAWPWVVAL 817
Query: 309 RYRYRGHFCGGTLISPEWVLTAKHCLE-KSSSPSSYKVILGAHEEHRLGEG------VQE 467
Y + CG +L+S +W+++A HC+ ++ PS +K ILG H L + E
Sbjct: 818 YYNGQ-LLCGASLVSRDWLVSAAHCVYGRNLEPSKWKAILGLHMTSNLTSPQIVTRLIDE 876
Query: 468 IDVSKLF-KEPSGADIALLKLSSPAVITDKVIPACLPTPNYVVADRTACYITGWGET--K 638
I ++ + + +DIA++ L TD + P CLP N V C I GWG+ +
Sbjct: 877 IVINPHYNRRRKDSDIAMMHLEFKVNYTDYIQPICLPEENQVFPPGRICSIAGWGKVIYQ 936
Query: 639 GTYGAGLLKEARLPVIENKVCNRYEYLDGKVSSKELCAGHLAGGIDSCQGDSGGPLVCFE 818
G+ A +L+EA +P++ N+ C + + + ++ +CAG+ GGIDSCQGDSGGPL+C E
Sbjct: 937 GS-PADILQEADVPLLSNEKCQQ-QMPEYNITENMMCAGYEEGGIDSCQGDSGGPLMCLE 994
Query: 819 KDKYILQGVTSWGLGCALPNKPGVCVRVSRFVTWIEEIM 935
++++L GVTS+G CALPN+PGV RV +F WI+ +
Sbjct: 995 NNRWLLAGVTSFGYQCALPNRPGVYARVPKFTEWIQSFL 1033
>ref|NP_999219.1| T-plasminogen activator [Sus scrofa]
Length = 562
Score = 177 bits (450), Expect = 3e-46
Identities = 114/309 (36%), Positives = 158/309 (51%), Gaps = 25/309 (8%)
Frame = +3
Query: 87 GLEK-NYCRNPDGDDNGPWCYTTNPQKL-FDYCDVPQCVTSSFDCGKPKVEPKKCPARVV 260
GL K NYCRNPDGD PWC+ KL ++YCD+PQCVT CG + K+ R+
Sbjct: 260 GLGKHNYCRNPDGDTQ-PWCHVLKDHKLTWEYCDLPQCVT----CGLRQY--KEPQFRIK 312
Query: 261 GGCVSIPHSWPWQISLRYRYRGH-----FCGGTLISPEWVLTAKHCLEKSSSPSSYKVIL 425
GG + S PWQ ++ + R CGG LIS WVL+A HC ++ P +V+L
Sbjct: 313 GGLYADITSHPWQAAIFVKNRRSPGERFLCGGILISSCWVLSAAHCFQERFPPHHVRVVL 372
Query: 426 GAHEEHRLGEGVQEIDVSKLF------KEPSGADIALLKLSSPAVI----TDKVIPACLP 575
G GE Q +V K + DIALL+L S ++ +D V CLP
Sbjct: 373 GRTYRLVPGEEEQAFEVEKYIVHKEFDDDTYDNDIALLQLKSDSLTCAQESDAVRTVCLP 432
Query: 576 TPNYVVADRTACYITGWG--ETKGTYGAGLLKEARLPVIENKVCNRYEYLDGKVSSKELC 749
N + D T C ++G+G E + + LKEA + + + C + +++ LC
Sbjct: 433 EANLQLPDWTECELSGYGKHEASSPFYSERLKEAHVRLYPSSRCTSKHLFNKTITNNMLC 492
Query: 750 AGHLAGG------IDSCQGDSGGPLVCFEKDKYILQGVTSWGLGCALPNKPGVCVRVSRF 911
AG G D+CQGDSGGPLVC + + L GV SWGLGC + PGV +V+ +
Sbjct: 493 AGDTRSGGDNANLHDACQGDSGGPLVCMKGNHMTLVGVISWGLGCGQKDVPGVYTKVTNY 552
Query: 912 VTWIEEIMR 938
+ WI + R
Sbjct: 553 LNWIRDNTR 561
>ref|NP_999274.1| pancreatic elastase II [Sus scrofa]
Length = 269
Score = 175 bits (444), Expect = 2e-45
Identities = 105/266 (39%), Positives = 147/266 (55%), Gaps = 16/266 (6%)
Frame = +3
Query: 195 VTSSFDCGKPKVEPKKCPARVVGGCVSIPHSWPWQISLRYRYRG---HFCGGTLISPEWV 365
V + CG P P+ RVVGG + P+SWPWQ+SL+Y G H CGGTL+ WV
Sbjct: 11 VAGALSCGLPANLPQL--PRVVGGEDARPNSWPWQVSLQYDSSGQWRHTCGGTLVDQSWV 68
Query: 366 LTAKHCLEKSSSPSSYKVILGAHEEHRLGEGVQEIDVSKLFKEP--------SGADIALL 521
LTA HC+ SS +Y+V+LG H G + VSKL +G DIALL
Sbjct: 69 LTAAHCI---SSSRTYRVVLGRHSLSTNEPGSLAVKVSKLVVHQDWNSNQLSNGNDIALL 125
Query: 522 KLSSPAVITDKVIPACLPTPNYVVADRTACYITGWGETKGTYGAG--LLKEARLPVIENK 695
KL+SP +TDK+ CLP ++ + CY+TGWG + T GA +L++ +L V++
Sbjct: 126 KLASPVSLTDKIQLGCLPAAGTILPNNYVCYVTGWGRLQ-TNGASPDILQQGQLLVVDYA 184
Query: 696 VCNRYEYLDGKVSSKELCAGHLAGGIDSCQGDSGGPLVC-FEKDKYILQGVTSWG--LGC 866
C++ + V + +CAG G I SC GDSGGPL C ++ + G+ S+G LGC
Sbjct: 185 TCSKPGWWGSTVKTNMICAGG-DGIISSCNGDSGGPLNCQGANGQWQVHGIVSFGSSLGC 243
Query: 867 ALPNKPGVCVRVSRFVTWIEEIMRRN 944
+KP V RVS ++ WI ++ N
Sbjct: 244 NYYHKPSVFTRVSNYIDWINSVIANN 269
>ref|NP_999356.1| tryptase [Sus scrofa]
Length = 275
Score = 174 bits (442), Expect = 3e-45
Identities = 100/247 (40%), Positives = 137/247 (55%), Gaps = 16/247 (6%)
Frame = +3
Query: 249 ARVVGGCVSIPHSWPWQISLRY--RYRGHFCGGTLISPEWVLTAKHCL-EKSSSPSSYKV 419
A +VGG + H WPWQ+SLR +Y HFCGG+LI P+WVLTA HC + + P +V
Sbjct: 29 AGIVGGKEAPGHKWPWQVSLRCLDQYWKHFCGGSLIHPQWVLTAAHCFGPEKADPLYIRV 88
Query: 420 ILGAHE---EHRLGEGVQEIDVSKLFKEPSGADIALLKLSSPAVITDKVIPACLPTPNYV 590
LG + RL + I + E +GADIALL+L P ++ V P LP +
Sbjct: 89 QLGEQHLYYQDRLLLVSRIIVHPNYYDEVNGADIALLELEDPVNLSSHVQPVTLPPASET 148
Query: 591 VADRTACYITGWGETKGTYGAGL---LKEARLPVIENKVCNRYEYLDGK-------VSSK 740
T C++TGWG+ + LK+ R+P++EN C+ +L V
Sbjct: 149 FPKGTRCWVTGWGDVHSGWPLPPPYPLKQVRVPIVENSECDMQYHLGLSTGDNIPIVRDD 208
Query: 741 ELCAGHLAGGIDSCQGDSGGPLVCFEKDKYILQGVTSWGLGCALPNKPGVCVRVSRFVTW 920
LCAG + G DSCQGDSGGPLVC ++ GV SWG GCALPN+PG+ RV+ ++ W
Sbjct: 209 MLCAG--SEGHDSCQGDSGGPLVCRVNGTWLQAGVVSWGEGCALPNRPGIYTRVTHYLDW 266
Query: 921 IEEIMRR 941
I + + R
Sbjct: 267 IHQCIPR 273
>ref|NP_999239.1| kallikrein [Sus scrofa]
Length = 643
Score = 172 bits (437), Expect = 1e-44
Identities = 96/240 (40%), Positives = 138/240 (57%), Gaps = 10/240 (4%)
Frame = +3
Query: 240 KCPARVVGGCVSIPHSWPWQISLRYRYRG--HFCGGTLISPEWVLTAKHCLEKSSSPSSY 413
K R+VGG S WPWQ+SL+ + R H CGG++I +WVLTA HC + S P +
Sbjct: 394 KANTRIVGGTDSFLGEWPWQVSLQAKLRAQNHLCGGSIIGHQWVLTAAHCFDGLSLPDIW 453
Query: 414 KVILGAHEEHRLGEG-----VQEIDVSKLFKE-PSGADIALLKLSSPAVITDKVIPACLP 575
++ G + + V+EI + + +K SG DIALLKL +P TD P CLP
Sbjct: 454 RIYGGILNISEITKETPFSQVKEIIIHQNYKILESGHDIALLKLETPLNYTDFQKPICLP 513
Query: 576 TPNYVVADRTACYITGWG--ETKGTYGAGLLKEARLPVIENKVCNRYEYLDGKVSSKELC 749
+ + T C++TGWG E KG +L++ +P++ N+ C + Y D K+S + +C
Sbjct: 514 SRDDTNVVYTNCWVTGWGFTEEKGEI-QNILQKVNIPLVSNEECQK-SYRDHKISKQMIC 571
Query: 750 AGHLAGGIDSCQGDSGGPLVCFEKDKYILQGVTSWGLGCALPNKPGVCVRVSRFVTWIEE 929
AG+ GG D+C+G+SGGPLVC + L G TSWG GCA +PGV +V ++ WI E
Sbjct: 572 AGYKEGGKDACKGESGGPLVCKYNGIWHLVGTTSWGEGCARREQPGVYTKVIEYMDWILE 631
>ref|NP_999198.1| preproacrosin [Sus scrofa]
Length = 400
Score = 162 bits (410), Expect = 1e-41
Identities = 95/259 (36%), Positives = 149/259 (57%), Gaps = 22/259 (8%)
Frame = +3
Query: 213 CGKPKVEPKKCPARVVGGCVSIPHSWPWQISLR-YRY----RGHFCGGTLISPEWVLTAK 377
CG + + RVVGG + P +WPW +SL+ + Y R H CGG L++ WVLTA
Sbjct: 25 CGLRFRQKLESGMRVVGGMSAEPGAWPWMVSLQIFMYHNNRRYHTCGGILLNSHWVLTAA 84
Query: 378 HCLEKSSSPSSYKVILGAHE-----EHRLGEGVQEIDVSKLF---KEPSGA---DIALLK 524
HC + + +++I GA+E + +QE V ++ K SG DIAL+K
Sbjct: 85 HCFKNKKKVTDWRLIFGANEVVWGSNKPVKPPLQERFVEEIIIHEKYVSGLEINDIALIK 144
Query: 525 LSSPAVITDKVIPACLPT--PNYVVADRTACYITGWG--ETKGTYGAGLLKEARLPVIEN 692
++ P + P CLP A +T C++TGWG + KG + L+EAR+ +I+
Sbjct: 145 ITPPVPCGPFIGPGCLPQFKAGPPRAPQT-CWVTGWGYLKEKGPRTSPTLQEARVALIDL 203
Query: 693 KVCNRYEYLDGKVSSKELCAGHLAGGIDSCQGDSGGPLVCFEK--DKYILQGVTSWGLGC 866
++CN ++ +G+V+S +CAG+ G ID+CQGDSGGPL+C ++ + +++ G+TSWG+GC
Sbjct: 204 ELCNSTQWYNGRVTSTNVCAGYPRGKIDTCQGDSGGPLMCRDRAENTFVVVGITSWGVGC 263
Query: 867 ALPNKPGVCVRVSRFVTWI 923
A +PGV ++ WI
Sbjct: 264 ARAKRPGVYTSTWPYLNWI 282
>ref|NP_999110.1| plasminogen activator [Sus scrofa]
Length = 442
Score = 162 bits (410), Expect = 1e-41
Identities = 110/318 (34%), Positives = 151/318 (47%), Gaps = 39/318 (12%)
Frame = +3
Query: 87 GLEK-NYCRNPDGDDNGPWCYT-TNPQKLFDYCDVPQCVTSS------------------ 206
GL K NYCRNPD + PWCY ++L C VP C
Sbjct: 117 GLGKHNYCRNPD-NQRRPWCYVQVGLKQLVQECMVPNCSGGESHRPAYDGKNPFSTPEKV 175
Query: 207 -FDCGKPKVEPKKCPARVVGGCVSIPHSWPWQISLRYRYRG----HFCGGTLISPEWVLT 371
F CG+ + P+ ++VGG + + PW ++ R+RG + CGG+LISP WV++
Sbjct: 176 EFQCGQKALRPR---FKIVGGKSTTIENQPWFAAIYRRHRGGSVTYVCGGSLISPCWVVS 232
Query: 372 AKHCLEKSSSPSSYKVILGAHEEHRLGEGVQEIDVSKLFKEPSGA--------DIALLKL 527
A HC Y V LG H G + +V KL + DIALLK+
Sbjct: 233 ATHCFINYQHKEDYIVYLGRQTLHSSTHGEMKFEVEKLILHEDYSADSLAHHNDIALLKI 292
Query: 528 SSP----AVITDKVIPACLPTPNYVVADRTACYITGWG-ETKGTY-GAGLLKEARLPVIE 689
+ A + + CLP N +C I G+G E Y LK + ++
Sbjct: 293 RTDKGQCAQPSRSIQTICLPPVNGDAHFGASCEIVGFGKEDPSDYLYPEQLKMTVVKLVS 352
Query: 690 NKVCNRYEYLDGKVSSKELCAGHLAGGIDSCQGDSGGPLVCFEKDKYILQGVTSWGLGCA 869
++ C + Y +V++K LCA DSCQGDSGGPLVC + + L G+ SWG CA
Sbjct: 353 HRECQQPHYYGSEVTTKMLCAADPQWKTDSCQGDSGGPLVCSTQGRLTLTGIVSWGRECA 412
Query: 870 LPNKPGVCVRVSRFVTWI 923
+ +KPGV RVSRF+TWI
Sbjct: 413 MKDKPGVYTRVSRFLTWI 430
>ref|NP_998959.1| tryptase [Sus scrofa]
Length = 277
Score = 160 bits (404), Expect = 7e-41
Identities = 98/267 (36%), Positives = 144/267 (53%), Gaps = 24/267 (8%)
Frame = +3
Query: 216 GKPKVEPKKCPAR----VVGGCVSIPHSWPWQISLR-YRYR----GHFCGGTLISPEWVL 368
G V P + P +VGG +PWQ+SLR YR + H CGG+L+ P+WVL
Sbjct: 14 GSVPVTPGRGPRHELVGIVGGHDVSTWKYPWQVSLRSYRVKLGRWMHHCGGSLVHPQWVL 73
Query: 369 TAKHCLEKSS-SPSSYKVILGAHEEHRLGEGVQEIDVSKLFKEPS-------GADIALLK 524
TA HC++ + P +V +G + +L +G Q V ++ + P GADIALL+
Sbjct: 74 TAAHCVDSHNLKPQDVRVQVG---QLKLYDGDQLTKVKQIIRHPKYLGFAKGGADIALLQ 130
Query: 525 LSSPAVITDKVIPACLPTPNYVVADRTACYITGWGETKGTYGAGL---LKEARLPVIENK 695
L +P ++ +V P+ V C +TGWG K L+E +P++ NK
Sbjct: 131 LEAPLTLSARVNVVGTPSATLKVPKGKRCSVTGWGNIKHNLSLPPPYHLQEVEVPIVANK 190
Query: 696 VCNRYEYLDGK----VSSKELCAGHLAGGIDSCQGDSGGPLVCFEKDKYILQGVTSWGLG 863
VCN++ Y G + + LCAG + G+DSCQGDSGGPL+C ++ G+ SWG G
Sbjct: 191 VCNKH-YRTGPNSKPIKADMLCAG--SKGLDSCQGDSGGPLMCSWNGTWVQVGIVSWGRG 247
Query: 864 CALPNKPGVCVRVSRFVTWIEEIMRRN 944
C L N PGV +RV +V+WI + + R+
Sbjct: 248 CGLHNFPGVYIRVMSYVSWIYQYVPRS 274
>ref|NP_998988.1| pancreatic elastase I [Sus scrofa]
Length = 266
Score = 156 bits (395), Expect = 8e-40
Identities = 95/248 (38%), Positives = 137/248 (55%), Gaps = 16/248 (6%)
Frame = +3
Query: 249 ARVVGGCVSIPHSWPWQISLRYRYRG---HFCGGTLISPEWVLTAKHCLEKSSSPSSYKV 419
ARVVGG + +SWP QISL+YR H CGGTLI WV+TA HC+++ + ++V
Sbjct: 25 ARVVGGTEAQRNSWPSQISLQYRSGSSWAHTCGGTLIRQNWVMTAAHCVDRELT---FRV 81
Query: 420 ILGAHEEHRLGEGVQEIDVSKLFKEP--------SGADIALLKLSSPAVITDKVIPACLP 575
++G H ++ Q + V K+ P +G DIALL+L + V LP
Sbjct: 82 VVGEHNLNQNDGTEQYVGVQKIVVHPYWNTDDVAAGYDIALLRLGQSVTLNSYVQLGVLP 141
Query: 576 TPNYVVADRTACYITGWGETKGTYG--AGLLKEARLPVIENKVCNRYEYLDGKVSSKELC 749
++A+ + CYITGWG T+ T G A L++A LP ++ + + Y V + +C
Sbjct: 142 RAGTILANNSPCYITGWGLTR-TNGQLAQTLQQAYLPTVDYAILSSSSYWGSTVKNSMVC 200
Query: 750 AGHLAGGIDS-CQGDSGGPLVCFEKDKYILQGVTSW--GLGCALPNKPGVCVRVSRFVTW 920
AG G+ S CQGDSGGPL C +Y + GVTS+ LGC + KP V RVS +++W
Sbjct: 201 AG--GDGVRSGCQGDSGGPLHCLVNGQYAVHGVTSFVSRLGCNVTRKPTVFTRVSAYISW 258
Query: 921 IEEIMRRN 944
I ++ N
Sbjct: 259 INNVIASN 266
>ref|NP_999407.1| factor XII [Sus scrofa]
Length = 616
Score = 147 bits (372), Expect = 4e-37
Identities = 112/385 (29%), Positives = 172/385 (44%), Gaps = 76/385 (19%)
Frame = +3
Query: 3 VAGVPCQEWAAQEPHRHSIFTPGTNPRAGLEKNYCRNPDGDDNGPWCYTTNPQKL-FDY- 176
++G PCQ WA++ + + N G + +CRNPD D PWC+ +L + Y
Sbjct: 233 LSGAPCQPWASEATYWNMTAEQALNWGLG-DHAFCRNPDNDTR-PWCFVWRGDQLSWQYC 290
Query: 177 ----CDVP-----------------------------------QCVTSSF---------- 209
C P Q +TS++
Sbjct: 291 RLARCQAPIGEAPPILTPTQSPSEHQDSPLLSREPQPTTQTPSQNLTSAWCAPPEQRGPL 350
Query: 210 ------DCGKPKVEPKKCPARVVGGCVSIPHSWPWQISLRYRYRGHFCGGTLISPEWVLT 371
CG+ + R+VGG V++P + P+ +L + +FC G+LI+P WVLT
Sbjct: 351 PSAGLVGCGQRLRKRLSSLNRIVGGLVALPGAHPYIAALYWGQ--NFCAGSLIAPCWVLT 408
Query: 372 AKHCLEKSSSPSSYKVILGAHEEHRLGEGVQEIDVSKLFKEPSGA------DIALLKLSS 533
A HCL+ +P V+LG ++ E Q + V S + D+AL++L
Sbjct: 409 AAHCLQNRPAPEELTVVLGQDRHNQSCEQCQTLAVRSYRLHESYSPKTYQHDLALVRLKE 468
Query: 534 PAV-----ITDKVIPACLP--TPNYVVADRTACYITGWG---ETKGTYGAGLLKEARLPV 683
A + V P CLP + + C + GWG E Y + L+EA++P+
Sbjct: 469 TADGCCAHPSPFVQPVCLPRSVASSAEPEGALCEVAGWGHQFEGAEEYSS-FLQEAQVPL 527
Query: 684 IENKVCNRYEYLDGKVSSKELCAGHLAGGIDSCQGDSGGPLVCFEKD---KYILQGVTSW 854
I + C+ + + LCAG L GG D+CQGDSGGPLVC ++ + +L+G+ SW
Sbjct: 528 ISPERCSAADVHGAAFTPGMLCAGFLEGGTDACQGDSGGPLVCEDETAERQLVLRGIVSW 587
Query: 855 GLGCALPNKPGVCVRVSRFVTWIEE 929
G GC KPGV V+ ++ WI+E
Sbjct: 588 GSGCGDRLKPGVYTDVANYLAWIQE 612
Database: RefSeqSP
Posted date: Aug 1, 2006 7:14 PM
Number of letters in database: 434,620
Number of sequences in database: 1040
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,268,329
Number of Sequences: 1040
Number of extensions: 34877
Number of successful extensions: 175
Number of sequences better than 1.0e-05: 10
Number of HSP's better than 0.0 without gapping: 102
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 115
length of database: 434,620
effective HSP length: 79
effective length of database: 352,460
effective search space used: 114197040
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
Search to RefSeqHP
BLASTX 2.2.10 [Oct-19-2004]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= LVR01_0062_H12
(1212 letters)
Database: RefSeqHP
39,411 sequences; 17,774,539 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_000292.1| plasminogen [Homo sapiens] 572 e-163
Alignment gi|NP_005568.1| lipoprotein, Lp(a) [Homo sapiens] 521 e-148
Alignment gi|XP_946885.1| PREDICTED: similar to Apolipoprotein(a) precurs... 503 e-142
Alignment gi|XP_931416.1| PREDICTED: similar to Apolipoprotein(a) precurs... 503 e-142
Alignment gi|NP_066278.2| macrophage stimulating 1 (hepatocyte growth fac... 240 2e-63
Alignment gi|NP_001010932.1| hepatocyte growth factor isoform 3 precursor... 210 2e-54
Alignment gi|NP_000592.3| hepatocyte growth factor isoform 1 preproprotei... 210 2e-54
Alignment gi|NP_892028.1| hepsin (transmembrane protease, serine 1) [Homo... 204 9e-53
Alignment gi|NP_002142.1| hepsin (transmembrane protease, serine 1) [Homo... 204 9e-53
Alignment gi|NP_115780.1| transmembrane protease, serine 3 isoform 2 [Hom... 192 5e-49
>ref|NP_000292.1| plasminogen [Homo sapiens]
Length = 810
Score = 572 bits (1473), Expect = e-163
Identities = 262/314 (83%), Positives = 282/314 (89%)
Frame = +3
Query: 3 VAGVPCQEWAAQEPHRHSIFTPGTNPRAGLEKNYCRNPDGDDNGPWCYTTNPQKLFDYCD 182
V G PCQ+WAAQEPHRHSIFTP TNPRAGLEKNYCRNPDGD GPWCYTTNP+KL+DYCD
Sbjct: 497 VTGTPCQDWAAQEPHRHSIFTPETNPRAGLEKNYCRNPDGDVGGPWCYTTNPRKLYDYCD 556
Query: 183 VPQCVTSSFDCGKPKVEPKKCPARVVGGCVSIPHSWPWQISLRYRYRGHFCGGTLISPEW 362
VPQC SFDCGKP+VEPKKCP RVVGGCV+ PHSWPWQ+SLR R+ HFCGGTLISPEW
Sbjct: 557 VPQCAAPSFDCGKPQVEPKKCPGRVVGGCVAHPHSWPWQVSLRTRFGMHFCGGTLISPEW 616
Query: 363 VLTAKHCLEKSSSPSSYKVILGAHEEHRLGEGVQEIDVSKLFKEPSGADIALLKLSSPAV 542
VLTA HCLEKS PSSYKVILGAH+E L VQEI+VS+LF EP+ DIALLKLSSPAV
Sbjct: 617 VLTAAHCLEKSPRPSSYKVILGAHQEVNLEPHVQEIEVSRLFLEPTRKDIALLKLSSPAV 676
Query: 543 ITDKVIPACLPTPNYVVADRTACYITGWGETKGTYGAGLLKEARLPVIENKVCNRYEYLD 722
ITDKVIPACLP+PNYVVADRT C+ITGWGET+GT+GAGLLKEA+LPVIENKVCNRYE+L+
Sbjct: 677 ITDKVIPACLPSPNYVVADRTECFITGWGETQGTFGAGLLKEAQLPVIENKVCNRYEFLN 736
Query: 723 GKVSSKELCAGHLAGGIDSCQGDSGGPLVCFEKDKYILQGVTSWGLGCALPNKPGVCVRV 902
G+V S ELCAGHLAGG DSCQGDSGGPLVCFEKDKYILQGVTSWGLGCA PNKPGV VRV
Sbjct: 737 GRVQSTELCAGHLAGGTDSCQGDSGGPLVCFEKDKYILQGVTSWGLGCARPNKPGVYVRV 796
Query: 903 SRFVTWIEEIMRRN 944
SRFVTWIE +MR N
Sbjct: 797 SRFVTWIEGVMRNN 810
Score = 97.8 bits (242), Expect = 2e-20
Identities = 38/77 (49%), Positives = 51/77 (66%)
Frame = +3
Query: 9 GVPCQEWAAQEPHRHSIFTPGTNPRAGLEKNYCRNPDGDDNGPWCYTTNPQKLFDYCDVP 188
G+ CQ+W++ PHR F+P T+P GLE+NYCRNPD D GPWCYTT+P+K +DYCD+
Sbjct: 121 GITCQKWSSTSPHRPR-FSPATHPSEGLEENYCRNPDNDPQGPWCYTTDPEKRYDYCDIL 179
Query: 189 QCVTSSFDCGKPKVEPK 239
+C C + K
Sbjct: 180 ECEEECMHCSGENYDGK 196
Score = 77.8 bits (190), Expect = 2e-14
Identities = 41/91 (45%), Positives = 53/91 (58%), Gaps = 2/91 (2%)
Frame = +3
Query: 3 VAGVPCQEWAAQEPHRHSIFTPGTNPRAGLEKNYCRNPDGDDNGPWCYTTNPQKLFDYCD 182
V+G CQ W+AQ PH H+ TP P L++NYCRNPDG PWC+TTN Q ++YC
Sbjct: 291 VSGHTCQHWSAQTPHTHNR-TPENFPCKNLDENYCRNPDGK-RAPWCHTTNSQVRWEYCK 348
Query: 183 VPQCVTS--SFDCGKPKVEPKKCPARVVGGC 269
+P C +S S + P P+ P VV C
Sbjct: 349 IPSCDSSPVSTEQLAPTAPPELTP--VVQDC 377
Score = 77.8 bits (190), Expect = 2e-14
Identities = 31/66 (46%), Positives = 44/66 (66%)
Frame = +3
Query: 3 VAGVPCQEWAAQEPHRHSIFTPGTNPRAGLEKNYCRNPDGDDNGPWCYTTNPQKLFDYCD 182
++G+ CQ W +Q PH H + P P L+KNYCRNPD + PWC+TT+P K ++ CD
Sbjct: 201 MSGLECQAWDSQSPHAHG-YIPSKFPNKNLKKNYCRNPDRELR-PWCFTTDPNKRWELCD 258
Query: 183 VPQCVT 200
+P+C T
Sbjct: 259 IPRCTT 264
Score = 77.4 bits (189), Expect = 2e-14
Identities = 32/62 (51%), Positives = 41/62 (66%)
Frame = +3
Query: 9 GVPCQEWAAQEPHRHSIFTPGTNPRAGLEKNYCRNPDGDDNGPWCYTTNPQKLFDYCDVP 188
G CQ W++ PHRH TP P AGL NYCRNPD D GPWC+TT+P ++YC++
Sbjct: 395 GKKCQSWSSMTPHRHQK-TPENYPNAGLTMNYCRNPDAD-KGPWCFTTDPSVRWEYCNLK 452
Query: 189 QC 194
+C
Sbjct: 453 KC 454
>ref|NP_005568.1| lipoprotein, Lp(a) [Homo sapiens]
Length = 4548
Score = 521 bits (1343), Expect = e-148
Identities = 241/314 (76%), Positives = 265/314 (84%)
Frame = +3
Query: 3 VAGVPCQEWAAQEPHRHSIFTPGTNPRAGLEKNYCRNPDGDDNGPWCYTTNPQKLFDYCD 182
V G PCQEWAAQEPHRHS F PGTN AGLEKNYCRNPDGD NGPWCYT NP+KLFDYCD
Sbjct: 4244 VTGTPCQEWAAQEPHRHSTFIPGTNKWAGLEKNYCRNPDGDINGPWCYTMNPRKLFDYCD 4303
Query: 183 VPQCVTSSFDCGKPKVEPKKCPARVVGGCVSIPHSWPWQISLRYRYRGHFCGGTLISPEW 362
+P C +SSFDCGKP+VEPKKCP +VGGCV+ PHSWPWQ+SLR R+ HFCGGTLISPEW
Sbjct: 4304 IPLCASSSFDCGKPQVEPKKCPGSIVGGCVAHPHSWPWQVSLRTRFGKHFCGGTLISPEW 4363
Query: 363 VLTAKHCLEKSSSPSSYKVILGAHEEHRLGEGVQEIDVSKLFKEPSGADIALLKLSSPAV 542
VLTA HCL+KSS PSSYKVILGAH+E L VQEI+VS+LF EP+ ADIALLKLS PAV
Sbjct: 4364 VLTAAHCLKKSSRPSSYKVILGAHQEVNLESHVQEIEVSRLFLEPTQADIALLKLSRPAV 4423
Query: 543 ITDKVIPACLPTPNYVVADRTACYITGWGETKGTYGAGLLKEARLPVIENKVCNRYEYLD 722
ITDKV+PACLP+P+Y+V RT CYITGWGET+GT+G GLLKEA+L VIEN+VCN Y+Y
Sbjct: 4424 ITDKVMPACLPSPDYMVTARTECYITGWGETQGTFGTGLLKEAQLLVIENEVCNHYKY-- 4481
Query: 723 GKVSSKELCAGHLAGGIDSCQGDSGGPLVCFEKDKYILQGVTSWGLGCALPNKPGVCVRV 902
+CA HLA G DSCQGDSGGPLVCFEKDKYILQGVTSWGLGCA PNKPGV RV
Sbjct: 4482 -------ICAEHLARGTDSCQGDSGGPLVCFEKDKYILQGVTSWGLGCARPNKPGVYARV 4534
Query: 903 SRFVTWIEEIMRRN 944
SRFVTWIE +MR N
Sbjct: 4535 SRFVTWIEGMMRNN 4548
Score = 75.9 bits (185), Expect = 7e-14
Identities = 32/67 (47%), Positives = 44/67 (65%)
Frame = +3
Query: 3 VAGVPCQEWAAQEPHRHSIFTPGTNPRAGLEKNYCRNPDGDDNGPWCYTTNPQKLFDYCD 182
V G CQ W++ PH+HS TP P AGL +NYCRNPD + PWCYT +P ++YC+
Sbjct: 3578 VTGRTCQAWSSMTPHQHSR-TPENYPNAGLTRNYCRNPDAEIR-PWCYTMDPSVRWEYCN 3635
Query: 183 VPQCVTS 203
+ QC+ +
Sbjct: 3636 LTQCLVT 3642
Score = 73.6 bits (179), Expect = 3e-13
Identities = 31/64 (48%), Positives = 40/64 (62%)
Frame = +3
Query: 3 VAGVPCQEWAAQEPHRHSIFTPGTNPRAGLEKNYCRNPDGDDNGPWCYTTNPQKLFDYCD 182
V G CQ W++ PHRH TP P GL NYCRNPD D GPWC+T +P ++YC+
Sbjct: 4140 VTGRTCQSWSSMTPHRHQR-TPENYPNDGLTMNYCRNPDAD-TGPWCFTMDPSIRWEYCN 4197
Query: 183 VPQC 194
+ +C
Sbjct: 4198 LTRC 4201
Score = 73.6 bits (179), Expect = 3e-13
Identities = 33/64 (51%), Positives = 41/64 (64%)
Frame = +3
Query: 3 VAGVPCQEWAAQEPHRHSIFTPGTNPRAGLEKNYCRNPDGDDNGPWCYTTNPQKLFDYCD 182
V G CQ W++ PH HS TP P AGL KNYCRNPD PWCYTT+P ++YC+
Sbjct: 3464 VTGRTCQAWSSMTPHSHSR-TPAYYPNAGLIKNYCRNPD-PVAAPWCYTTDPSVRWEYCN 3521
Query: 183 VPQC 194
+ +C
Sbjct: 3522 LTRC 3525
Score = 72.0 bits (175), Expect = 1e-12
Identities = 32/64 (50%), Positives = 40/64 (62%)
Frame = +3
Query: 3 VAGVPCQEWAAQEPHRHSIFTPGTNPRAGLEKNYCRNPDGDDNGPWCYTTNPQKLFDYCD 182
V G CQ W++ PH H TP P AGL +NYCRNPD PWCYTT+P ++YC+
Sbjct: 4026 VTGRTCQSWSSMIPHWHQR-TPENYPNAGLTENYCRNPDSGKQ-PWCYTTDPCVRWEYCN 4083
Query: 183 VPQC 194
+ QC
Sbjct: 4084 LTQC 4087
Score = 69.7 bits (169), Expect = 5e-12
Identities = 34/79 (43%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
Frame = +3
Query: 3 VAGVPCQEWAAQEPHRHSIFTPGTNPRAGLEKNYCRNPDGDDNGPWCYTTNPQKLFDYCD 182
+ G CQ W++ PH H P P AGL +NYCRNPD + PWCYT +P ++YC+
Sbjct: 3912 ITGRTCQSWSSMTPHWHRRI-PLYYPNAGLTRNYCRNPDAEIR-PWCYTMDPSVRWEYCN 3969
Query: 183 VPQC-VTSSFDCGKPKVEP 236
+ +C VT S P V P
Sbjct: 3970 LTRCPVTESSVLTTPTVAP 3988
Score = 67.8 bits (164), Expect = 2e-11
Identities = 32/69 (46%), Positives = 42/69 (60%), Gaps = 1/69 (1%)
Frame = +3
Query: 3 VAGVPCQEWAAQEPHRHSIFTPGTNPRAGLEKNYCRNPDGDDNGPWCYTTNPQKLFDYCD 182
V G CQ W++ PH H T P GL +NYCRNPD + + PWCYT +P ++YC+
Sbjct: 3692 VTGRTCQSWSSMTPHWHQRTTE-YYPNGGLTRNYCRNPDAEIS-PWCYTMDPNVRWEYCN 3749
Query: 183 VPQC-VTSS 206
+ QC VT S
Sbjct: 3750 LTQCPVTES 3758
Score = 67.0 bits (162), Expect = 3e-11
Identities = 29/64 (45%), Positives = 38/64 (59%)
Frame = +3
Query: 3 VAGVPCQEWAAQEPHRHSIFTPGTNPRAGLEKNYCRNPDGDDNGPWCYTTNPQKLFDYCD 182
V G CQ W++ PH H T P GL +NYCRNPD + PWCYT +P ++YC+
Sbjct: 3798 VTGRTCQSWSSMTPHWHQRTTE-YYPNGGLTRNYCRNPDAEIR-PWCYTMDPSVRWEYCN 3855
Query: 183 VPQC 194
+ QC
Sbjct: 3856 LTQC 3859
Score = 66.2 bits (160), Expect = 5e-11
Identities = 31/64 (48%), Positives = 39/64 (60%)
Frame = +3
Query: 3 VAGVPCQEWAAQEPHRHSIFTPGTNPRAGLEKNYCRNPDGDDNGPWCYTTNPQKLFDYCD 182
V G CQ W++ PH HS TP P AGL NYCRNPD P+CYT +P ++YC+
Sbjct: 3350 VTGRTCQAWSSMTPHSHSR-TPEYYPNAGLIMNYCRNPD-PVAAPYCYTRDPSVRWEYCN 3407
Query: 183 VPQC 194
+ QC
Sbjct: 3408 LTQC 3411
Score = 65.9 bits (159), Expect = 7e-11
Identities = 31/64 (48%), Positives = 39/64 (60%)
Frame = +3
Query: 3 VAGVPCQEWAAQEPHRHSIFTPGTNPRAGLEKNYCRNPDGDDNGPWCYTTNPQKLFDYCD 182
V G CQ W++ PH HS TP P AGL NYCRNPD P+CYT +P ++YC+
Sbjct: 3236 VTGRTCQAWSSMTPHSHSR-TPEYYPNAGLIMNYCRNPDA-VAAPYCYTRDPGVRWEYCN 3293
Query: 183 VPQC 194
+ QC
Sbjct: 3294 LTQC 3297
Score = 65.9 bits (159), Expect = 7e-11
Identities = 31/64 (48%), Positives = 39/64 (60%)
Frame = +3
Query: 3 VAGVPCQEWAAQEPHRHSIFTPGTNPRAGLEKNYCRNPDGDDNGPWCYTTNPQKLFDYCD 182
V G CQ W++ PH HS TP P AGL NYCRNPD P+CYT +P ++YC+
Sbjct: 3122 VTGRTCQAWSSMTPHSHSR-TPEYYPNAGLIMNYCRNPDA-VAAPYCYTRDPGVRWEYCN 3179
Query: 183 VPQC 194
+ QC
Sbjct: 3180 LTQC 3183
Score = 65.9 bits (159), Expect = 7e-11
Identities = 31/64 (48%), Positives = 39/64 (60%)
Frame = +3
Query: 3 VAGVPCQEWAAQEPHRHSIFTPGTNPRAGLEKNYCRNPDGDDNGPWCYTTNPQKLFDYCD 182
V G CQ W++ PH HS TP P AGL NYCRNPD P+CYT +P ++YC+
Sbjct: 3008 VTGRTCQAWSSMTPHSHSR-TPEYYPNAGLIMNYCRNPDA-VAAPYCYTRDPGVRWEYCN 3065
Query: 183 VPQC 194
+ QC
Sbjct: 3066 LTQC 3069
Score = 65.9 bits (159), Expect = 7e-11
Identities = 31/64 (48%), Positives = 39/64 (60%)
Frame = +3
Query: 3 VAGVPCQEWAAQEPHRHSIFTPGTNPRAGLEKNYCRNPDGDDNGPWCYTTNPQKLFDYCD 182
V G CQ W++ PH HS TP P AGL NYCRNPD P+CYT +P ++YC+
Sbjct: 2894 VTGRTCQAWSSMTPHSHSR-TPEYYPNAGLIMNYCRNPDA-VAAPYCYTRDPGVRWEYCN 2951
Query: 183 VPQC 194
+ QC
Sbjct: 2952 LTQC 2955
Score = 65.9 bits (159), Expect = 7e-11
Identities = 31/64 (48%), Positives = 39/64 (60%)
Frame = +3
Query: 3 VAGVPCQEWAAQEPHRHSIFTPGTNPRAGLEKNYCRNPDGDDNGPWCYTTNPQKLFDYCD 182
V G CQ W++ PH HS TP P AGL NYCRNPD P+CYT +P ++YC+
Sbjct: 2780 VTGRTCQAWSSMTPHSHSR-TPEYYPNAGLIMNYCRNPDA-VAAPYCYTRDPGVRWEYCN 2837
Query: 183 VPQC 194
+ QC
Sbjct: 2838 LTQC 2841
Score = 65.9 bits (159), Expect = 7e-11
Identities = 31/64 (48%), Positives = 39/64 (60%)
Frame = +3
Query: 3 VAGVPCQEWAAQEPHRHSIFTPGTNPRAGLEKNYCRNPDGDDNGPWCYTTNPQKLFDYCD 182
V G CQ W++ PH HS TP P AGL NYCRNPD P+CYT +P ++YC+
Sbjct: 2666 VTGRTCQAWSSMTPHSHSR-TPEYYPNAGLIMNYCRNPDA-VAAPYCYTRDPGVRWEYCN 2723
Query: 183 VPQC 194
+ QC
Sbjct: 2724 LTQC 2727
Score = 65.9 bits (159), Expect = 7e-11
Identities = 31/64 (48%), Positives = 39/64 (60%)
Frame = +3
Query: 3 VAGVPCQEWAAQEPHRHSIFTPGTNPRAGLEKNYCRNPDGDDNGPWCYTTNPQKLFDYCD 182
V G CQ W++ PH HS TP P AGL NYCRNPD P+CYT +P ++YC+
Sbjct: 2552 VTGRTCQAWSSMTPHSHSR-TPEYYPNAGLIMNYCRNPDA-VAAPYCYTRDPGVRWEYCN 2609
Query: 183 VPQC 194
+ QC
Sbjct: 2610 LTQC 2613
Score = 65.9 bits (159), Expect = 7e-11
Identities = 31/64 (48%), Positives = 39/64 (60%)
Frame = +3
Query: 3 VAGVPCQEWAAQEPHRHSIFTPGTNPRAGLEKNYCRNPDGDDNGPWCYTTNPQKLFDYCD 182
V G CQ W++ PH HS TP P AGL NYCRNPD P+CYT +P ++YC+
Sbjct: 2438 VTGRTCQAWSSMTPHSHSR-TPEYYPNAGLIMNYCRNPDA-VAAPYCYTRDPGVRWEYCN 2495
Query: 183 VPQC 194
+ QC
Sbjct: 2496 LTQC 2499
Score = 65.9 bits (159), Expect = 7e-11
Identities = 31/64 (48%), Positives = 39/64 (60%)
Frame = +3
Query: 3 VAGVPCQEWAAQEPHRHSIFTPGTNPRAGLEKNYCRNPDGDDNGPWCYTTNPQKLFDYCD 182
V G CQ W++ PH HS TP P AGL NYCRNPD P+CYT +P ++YC+
Sbjct: 2324 VTGRTCQAWSSMTPHSHSR-TPEYYPNAGLIMNYCRNPDA-VAAPYCYTRDPGVRWEYCN 2381
Query: 183 VPQC 194
+ QC
Sbjct: 2382 LTQC 2385
Score = 65.9 bits (159), Expect = 7e-11
Identities = 31/64 (48%), Positives = 39/64 (60%)
Frame = +3
Query: 3 VAGVPCQEWAAQEPHRHSIFTPGTNPRAGLEKNYCRNPDGDDNGPWCYTTNPQKLFDYCD 182
V G CQ W++ PH HS TP P AGL NYCRNPD P+CYT +P ++YC+
Sbjct: 2210 VTGRTCQAWSSMTPHSHSR-TPEYYPNAGLIMNYCRNPDA-VAAPYCYTRDPGVRWEYCN 2267
Query: 183 VPQC 194
+ QC
Sbjct: 2268 LTQC 2271
Score = 65.9 bits (159), Expect = 7e-11
Identities = 31/64 (48%), Positives = 39/64 (60%)
Frame = +3
Query: 3 VAGVPCQEWAAQEPHRHSIFTPGTNPRAGLEKNYCRNPDGDDNGPWCYTTNPQKLFDYCD 182
V G CQ W++ PH HS TP P AGL NYCRNPD P+CYT +P ++YC+
Sbjct: 2096 VTGRTCQAWSSMTPHSHSR-TPEYYPNAGLIMNYCRNPDA-VAAPYCYTRDPGVRWEYCN 2153
Query: 183 VPQC 194
+ QC
Sbjct: 2154 LTQC 2157
Score = 65.9 bits (159), Expect = 7e-11
Identities = 31/64 (48%), Positives = 39/64 (60%)
Frame = +3
Query: 3 VAGVPCQEWAAQEPHRHSIFTPGTNPRAGLEKNYCRNPDGDDNGPWCYTTNPQKLFDYCD 182
V G CQ W++ PH HS TP P AGL NYCRNPD P+CYT +P ++YC+
Sbjct: 1982 VTGRTCQAWSSMTPHSHSR-TPEYYPNAGLIMNYCRNPDA-VAAPYCYTRDPGVRWEYCN 2039
Query: 183 VPQC 194
+ QC
Sbjct: 2040 LTQC 2043
Score = 65.9 bits (159), Expect = 7e-11
Identities = 31/64 (48%), Positives = 39/64 (60%)
Frame = +3
Query: 3 VAGVPCQEWAAQEPHRHSIFTPGTNPRAGLEKNYCRNPDGDDNGPWCYTTNPQKLFDYCD 182
V G CQ W++ PH HS TP P AGL NYCRNPD P+CYT +P ++YC+
Sbjct: 1868 VTGRTCQAWSSMTPHSHSR-TPEYYPNAGLIMNYCRNPDA-VAAPYCYTRDPGVRWEYCN 1925
Query: 183 VPQC 194
+ QC
Sbjct: 1926 LTQC 1929
Score = 65.9 bits (159), Expect = 7e-11
Identities = 31/64 (48%), Positives = 39/64 (60%)
Frame = +3
Query: 3 VAGVPCQEWAAQEPHRHSIFTPGTNPRAGLEKNYCRNPDGDDNGPWCYTTNPQKLFDYCD 182
V G CQ W++ PH HS TP P AGL NYCRNPD P+CYT +P ++YC+
Sbjct: 1754 VTGRTCQAWSSMTPHSHSR-TPEYYPNAGLIMNYCRNPDA-VAAPYCYTRDPGVRWEYCN 1811
Query: 183 VPQC 194
+ QC
Sbjct: 1812 LTQC 1815
Score = 65.9 bits (159), Expect = 7e-11
Identities = 31/64 (48%), Positives = 39/64 (60%)
Frame = +3
Query: 3 VAGVPCQEWAAQEPHRHSIFTPGTNPRAGLEKNYCRNPDGDDNGPWCYTTNPQKLFDYCD 182
V G CQ W++ PH HS TP P AGL NYCRNPD P+CYT +P ++YC+
Sbjct: 1640 VTGRTCQAWSSMTPHSHSR-TPEYYPNAGLIMNYCRNPDA-VAAPYCYTRDPGVRWEYCN 1697
Query: 183 VPQC 194
+ QC
Sbjct: 1698 LTQC 1701
Score = 65.9 bits (159), Expect = 7e-11
Identities = 31/64 (48%), Positives = 39/64 (60%)
Frame = +3
Query: 3 VAGVPCQEWAAQEPHRHSIFTPGTNPRAGLEKNYCRNPDGDDNGPWCYTTNPQKLFDYCD 182
V G CQ W++ PH HS TP P AGL NYCRNPD P+CYT +P ++YC+
Sbjct: 1526 VTGRTCQAWSSMTPHSHSR-TPEYYPNAGLIMNYCRNPDA-VAAPYCYTRDPGVRWEYCN 1583
Query: 183 VPQC 194
+ QC
Sbjct: 1584 LTQC 1587
Score = 65.9 bits (159), Expect = 7e-11
Identities = 31/64 (48%), Positives = 39/64 (60%)
Frame = +3
Query: 3 VAGVPCQEWAAQEPHRHSIFTPGTNPRAGLEKNYCRNPDGDDNGPWCYTTNPQKLFDYCD 182
V G CQ W++ PH HS TP P AGL NYCRNPD P+CYT +P ++YC+
Sbjct: 1412 VTGRTCQAWSSMTPHSHSR-TPEYYPNAGLIMNYCRNPDA-VAAPYCYTRDPGVRWEYCN 1469
Query: 183 VPQC 194
+ QC
Sbjct: 1470 LTQC 1473
Score = 65.9 bits (159), Expect = 7e-11
Identities = 31/64 (48%), Positives = 39/64 (60%)
Frame = +3
Query: 3 VAGVPCQEWAAQEPHRHSIFTPGTNPRAGLEKNYCRNPDGDDNGPWCYTTNPQKLFDYCD 182
V G CQ W++ PH HS TP P AGL NYCRNPD P+CYT +P ++YC+
Sbjct: 1298 VTGRTCQAWSSMTPHSHSR-TPEYYPNAGLIMNYCRNPDA-VAAPYCYTRDPGVRWEYCN 1355
Query: 183 VPQC 194
+ QC
Sbjct: 1356 LTQC 1359
Score = 65.9 bits (159), Expect = 7e-11
Identities = 31/64 (48%), Positives = 39/64 (60%)
Frame = +3
Query: 3 VAGVPCQEWAAQEPHRHSIFTPGTNPRAGLEKNYCRNPDGDDNGPWCYTTNPQKLFDYCD 182
V G CQ W++ PH HS TP P AGL NYCRNPD P+CYT +P ++YC+
Sbjct: 1184 VTGRTCQAWSSMTPHSHSR-TPEYYPNAGLIMNYCRNPDA-VAAPYCYTRDPGVRWEYCN 1241
Query: 183 VPQC 194
+ QC
Sbjct: 1242 LTQC 1245
Score = 65.9 bits (159), Expect = 7e-11
Identities = 31/64 (48%), Positives = 39/64 (60%)
Frame = +3
Query: 3 VAGVPCQEWAAQEPHRHSIFTPGTNPRAGLEKNYCRNPDGDDNGPWCYTTNPQKLFDYCD 182
V G CQ W++ PH HS TP P AGL NYCRNPD P+CYT +P ++YC+
Sbjct: 1070 VTGRTCQAWSSMTPHSHSR-TPEYYPNAGLIMNYCRNPDA-VAAPYCYTRDPGVRWEYCN 1127
Query: 183 VPQC 194
+ QC
Sbjct: 1128 LTQC 1131
Score = 65.9 bits (159), Expect = 7e-11
Identities = 31/64 (48%), Positives = 39/64 (60%)
Frame = +3
Query: 3 VAGVPCQEWAAQEPHRHSIFTPGTNPRAGLEKNYCRNPDGDDNGPWCYTTNPQKLFDYCD 182
V G CQ W++ PH HS TP P AGL NYCRNPD P+CYT +P ++YC+
Sbjct: 956 VTGRTCQAWSSMTPHSHSR-TPEYYPNAGLIMNYCRNPDA-VAAPYCYTRDPGVRWEYCN 1013
Query: 183 VPQC 194
+ QC
Sbjct: 1014 LTQC 1017
Score = 65.9 bits (159), Expect = 7e-11
Identities = 31/64 (48%), Positives = 39/64 (60%)
Frame = +3
Query: 3 VAGVPCQEWAAQEPHRHSIFTPGTNPRAGLEKNYCRNPDGDDNGPWCYTTNPQKLFDYCD 182
V G CQ W++ PH HS TP P AGL NYCRNPD P+CYT +P ++YC+
Sbjct: 842 VTGRTCQAWSSMTPHSHSR-TPEYYPNAGLIMNYCRNPDA-VAAPYCYTRDPGVRWEYCN 899
Query: 183 VPQC 194
+ QC
Sbjct: 900 LTQC 903
Score = 65.9 bits (159), Expect = 7e-11
Identities = 31/64 (48%), Positives = 39/64 (60%)
Frame = +3
Query: 3 VAGVPCQEWAAQEPHRHSIFTPGTNPRAGLEKNYCRNPDGDDNGPWCYTTNPQKLFDYCD 182
V G CQ W++ PH HS TP P AGL NYCRNPD P+CYT +P ++YC+
Sbjct: 728 VTGRTCQAWSSMTPHSHSR-TPEYYPNAGLIMNYCRNPDA-VAAPYCYTRDPGVRWEYCN 785
Query: 183 VPQC 194
+ QC
Sbjct: 786 LTQC 789
Score = 65.9 bits (159), Expect = 7e-11
Identities = 31/64 (48%), Positives = 39/64 (60%)
Frame = +3
Query: 3 VAGVPCQEWAAQEPHRHSIFTPGTNPRAGLEKNYCRNPDGDDNGPWCYTTNPQKLFDYCD 182
V G CQ W++ PH HS TP P AGL NYCRNPD P+CYT +P ++YC+
Sbjct: 614 VTGRTCQAWSSMTPHSHSR-TPEYYPNAGLIMNYCRNPDA-VAAPYCYTRDPGVRWEYCN 671
Query: 183 VPQC 194
+ QC
Sbjct: 672 LTQC 675
Score = 65.9 bits (159), Expect = 7e-11
Identities = 31/64 (48%), Positives = 39/64 (60%)
Frame = +3
Query: 3 VAGVPCQEWAAQEPHRHSIFTPGTNPRAGLEKNYCRNPDGDDNGPWCYTTNPQKLFDYCD 182
V G CQ W++ PH HS TP P AGL NYCRNPD P+CYT +P ++YC+
Sbjct: 500 VTGRTCQAWSSMTPHSHSR-TPEYYPNAGLIMNYCRNPDA-VAAPYCYTRDPGVRWEYCN 557
Query: 183 VPQC 194
+ QC
Sbjct: 558 LTQC 561
Score = 65.9 bits (159), Expect = 7e-11
Identities = 31/64 (48%), Positives = 39/64 (60%)
Frame = +3
Query: 3 VAGVPCQEWAAQEPHRHSIFTPGTNPRAGLEKNYCRNPDGDDNGPWCYTTNPQKLFDYCD 182
V G CQ W++ PH HS TP P AGL NYCRNPD P+CYT +P ++YC+
Sbjct: 386 VTGRTCQAWSSMTPHSHSR-TPEYYPNAGLIMNYCRNPDA-VAAPYCYTRDPGVRWEYCN 443
Query: 183 VPQC 194
+ QC
Sbjct: 444 LTQC 447
Score = 65.9 bits (159), Expect = 7e-11
Identities = 31/64 (48%), Positives = 39/64 (60%)
Frame = +3
Query: 3 VAGVPCQEWAAQEPHRHSIFTPGTNPRAGLEKNYCRNPDGDDNGPWCYTTNPQKLFDYCD 182
V G CQ W++ PH HS TP P AGL NYCRNPD P+CYT +P ++YC+
Sbjct: 272 VTGRTCQAWSSMTPHSHSR-TPEYYPNAGLIMNYCRNPDA-VAAPYCYTRDPGVRWEYCN 329
Query: 183 VPQC 194
+ QC
Sbjct: 330 LTQC 333
Score = 65.9 bits (159), Expect = 7e-11
Identities = 31/64 (48%), Positives = 39/64 (60%)
Frame = +3
Query: 3 VAGVPCQEWAAQEPHRHSIFTPGTNPRAGLEKNYCRNPDGDDNGPWCYTTNPQKLFDYCD 182
V G CQ W++ PH HS TP P AGL NYCRNPD P+CYT +P ++YC+
Sbjct: 158 VTGRTCQAWSSMTPHSHSR-TPEYYPNAGLIMNYCRNPDA-VAAPYCYTRDPGVRWEYCN 215
Query: 183 VPQC 194
+ QC
Sbjct: 216 LTQC 219
Score = 63.2 bits (152), Expect = 4e-10
Identities = 29/64 (45%), Positives = 39/64 (60%)
Frame = +3
Query: 3 VAGVPCQEWAAQEPHRHSIFTPGTNPRAGLEKNYCRNPDGDDNGPWCYTTNPQKLFDYCD 182
V G CQ W++ PH+H+ T P AGL NYCRNPD P+CYT +P ++YC+
Sbjct: 44 VTGRTCQAWSSMTPHQHNRTTENY-PNAGLIMNYCRNPDAVA-APYCYTRDPGVRWEYCN 101
Query: 183 VPQC 194
+ QC
Sbjct: 102 LTQC 105
>ref|XP_946885.1| PREDICTED: similar to Apolipoprotein(a) precursor (Apo(a)) (Lp(a))
[Homo sapiens]
Length = 440
Score = 503 bits (1296), Expect = e-142
Identities = 232/304 (76%), Positives = 256/304 (84%)
Frame = +3
Query: 3 VAGVPCQEWAAQEPHRHSIFTPGTNPRAGLEKNYCRNPDGDDNGPWCYTTNPQKLFDYCD 182
V G PCQEWAAQEPHRHS F PGTN AGLEKNYCRNPDGD NGPWCYT NP+KLFDYCD
Sbjct: 75 VTGTPCQEWAAQEPHRHSTFIPGTNKWAGLEKNYCRNPDGDINGPWCYTMNPRKLFDYCD 134
Query: 183 VPQCVTSSFDCGKPKVEPKKCPARVVGGCVSIPHSWPWQISLRYRYRGHFCGGTLISPEW 362
+P C +SSFDCGKP+VEPKKCP +VGGCV+ PHSWPWQ+SLR R+ HFCGGTLISPEW
Sbjct: 135 IPLCASSSFDCGKPQVEPKKCPGSIVGGCVAHPHSWPWQVSLRTRFGKHFCGGTLISPEW 194
Query: 363 VLTAKHCLEKSSSPSSYKVILGAHEEHRLGEGVQEIDVSKLFKEPSGADIALLKLSSPAV 542
VLTA HCL+KSS PSSYKVILGAH+E L VQEI+VS+LF EP+ ADIALLKLS PAV
Sbjct: 195 VLTAAHCLKKSSRPSSYKVILGAHQEVNLESHVQEIEVSRLFLEPTQADIALLKLSRPAV 254
Query: 543 ITDKVIPACLPTPNYVVADRTACYITGWGETKGTYGAGLLKEARLPVIENKVCNRYEYLD 722
ITDKV+PACLP+P+Y+V RT CYITGWGET+GT+G GLLKEA+L VIEN+VCN Y+Y
Sbjct: 255 ITDKVMPACLPSPDYMVTARTECYITGWGETQGTFGTGLLKEAQLLVIENEVCNHYKY-- 312
Query: 723 GKVSSKELCAGHLAGGIDSCQGDSGGPLVCFEKDKYILQGVTSWGLGCALPNKPGVCVRV 902
+CA HLA G DSCQGDSGGPLVCFEKDKYILQGVTSWGLGCA PNKPGV RV
Sbjct: 313 -------ICAEHLARGTDSCQGDSGGPLVCFEKDKYILQGVTSWGLGCARPNKPGVYARV 365
Query: 903 SRFV 914
SR +
Sbjct: 366 SRMI 369
>ref|XP_931416.1| PREDICTED: similar to Apolipoprotein(a) precursor (Apo(a)) (Lp(a))
[Homo sapiens]
Length = 440
Score = 503 bits (1296), Expect = e-142
Identities = 232/304 (76%), Positives = 256/304 (84%)
Frame = +3
Query: 3 VAGVPCQEWAAQEPHRHSIFTPGTNPRAGLEKNYCRNPDGDDNGPWCYTTNPQKLFDYCD 182
V G PCQEWAAQEPHRHS F PGTN AGLEKNYCRNPDGD NGPWCYT NP+KLFDYCD
Sbjct: 75 VTGTPCQEWAAQEPHRHSTFIPGTNKWAGLEKNYCRNPDGDINGPWCYTMNPRKLFDYCD 134
Query: 183 VPQCVTSSFDCGKPKVEPKKCPARVVGGCVSIPHSWPWQISLRYRYRGHFCGGTLISPEW 362
+P C +SSFDCGKP+VEPKKCP +VGGCV+ PHSWPWQ+SLR R+ HFCGGTLISPEW
Sbjct: 135 IPLCASSSFDCGKPQVEPKKCPGSIVGGCVAHPHSWPWQVSLRTRFGKHFCGGTLISPEW 194
Query: 363 VLTAKHCLEKSSSPSSYKVILGAHEEHRLGEGVQEIDVSKLFKEPSGADIALLKLSSPAV 542
VLTA HCL+KSS PSSYKVILGAH+E L VQEI+VS+LF EP+ ADIALLKLS PAV
Sbjct: 195 VLTAAHCLKKSSRPSSYKVILGAHQEVNLESHVQEIEVSRLFLEPTQADIALLKLSRPAV 254
Query: 543 ITDKVIPACLPTPNYVVADRTACYITGWGETKGTYGAGLLKEARLPVIENKVCNRYEYLD 722
ITDKV+PACLP+P+Y+V RT CYITGWGET+GT+G GLLKEA+L VIEN+VCN Y+Y
Sbjct: 255 ITDKVMPACLPSPDYMVTARTECYITGWGETQGTFGTGLLKEAQLLVIENEVCNHYKY-- 312
Query: 723 GKVSSKELCAGHLAGGIDSCQGDSGGPLVCFEKDKYILQGVTSWGLGCALPNKPGVCVRV 902
+CA HLA G DSCQGDSGGPLVCFEKDKYILQGVTSWGLGCA PNKPGV RV
Sbjct: 313 -------ICAEHLARGTDSCQGDSGGPLVCFEKDKYILQGVTSWGLGCARPNKPGVYARV 365
Query: 903 SRFV 914
SR +
Sbjct: 366 SRMI 369
>ref|NP_066278.2| macrophage stimulating 1 (hepatocyte growth factor-like) [Homo
sapiens]
Length = 711
Score = 240 bits (613), Expect = 2e-63
Identities = 133/328 (40%), Positives = 183/328 (55%), Gaps = 18/328 (5%)
Frame = +3
Query: 9 GVPCQEWAAQEPHRHSIFTPGTNPRAGLEKNYCRNPDGDDNGPWCYTTNPQKLFDYCDVP 188
GV CQ W+A+ PH+ FT + P A LE+N+CRNPDGD +GPWCYT +P+ FDYC +
Sbjct: 388 GVQCQRWSAETPHKPQ-FTFTSEPHAQLEENFCRNPDGDSHGPWCYTMDPRTPFDYCALR 446
Query: 189 QCVTSS------------FD-CGK--PKVEPKKCPARVVGGCVSIPHSWPWQISLRYRYR 323
+C F+ CGK +++ ++ RVVGG P + PW +SLR R
Sbjct: 447 RCADDQPPSILDPPDQVQFEKCGKRVDRLDQRRSKLRVVGGH---PGNSPWTVSLRNRQG 503
Query: 324 GHFCGGTLISPEWVLTAKHCLEKSSSP-SSYKVILGA-HEEHRLGE-GVQEIDVSKLFKE 494
HFCGG+L+ +W+LTA+ C P + Y+V LG + + GE +Q + V+K+
Sbjct: 504 QHFCGGSLVKEQWILTARQCFSSCHMPLTGYEVWLGTLFQNPQHGEPSLQRVPVAKMVCG 563
Query: 495 PSGADIALLKLSSPAVITDKVIPACLPTPNYVVADRTACYITGWGETKGTYGAGLLKEAR 674
PSG+ + LLKL + +V CLP YVV T C I GWGETKGT +L A
Sbjct: 564 PSGSQLVLLKLERSVTLNQRVALICLPPEWYVVPPGTKCEIAGWGETKGTGNDTVLNVAL 623
Query: 675 LPVIENKVCNRYEYLDGKVSSKELCAGHLAGGIDSCQGDSGGPLVCFEKDKYILQGVTSW 854
L VI N+ CN G+V E+C L + +C+GD GGPL CF + ++L+G+
Sbjct: 624 LNVISNQECNIKH--RGRVRESEMCTEGLLAPVGACEGDYGGPLACFTHNCWVLEGIIIP 681
Query: 855 GLGCALPNKPGVCVRVSRFVTWIEEIMR 938
CA P V RVS FV WI ++MR
Sbjct: 682 NRVCARSRWPAVFTRVSVFVDWIHKVMR 709
Score = 77.0 bits (188), Expect = 3e-14
Identities = 33/63 (52%), Positives = 42/63 (66%)
Frame = +3
Query: 6 AGVPCQEWAAQEPHRHSIFTPGTNPRAGLEKNYCRNPDGDDNGPWCYTTNPQKLFDYCDV 185
+G CQ W Q PH+H F PG GL+ NYCRNPDG + PWCYTT+PQ ++CD+
Sbjct: 208 SGRECQRWDLQHPHQHP-FEPGKFLDQGLDDNYCRNPDGSER-PWCYTTDPQIEREFCDL 265
Query: 186 PQC 194
P+C
Sbjct: 266 PRC 268
Score = 77.0 bits (188), Expect = 3e-14
Identities = 33/64 (51%), Positives = 42/64 (65%)
Frame = +3
Query: 3 VAGVPCQEWAAQEPHRHSIFTPGTNPRAGLEKNYCRNPDGDDNGPWCYTTNPQKLFDYCD 182
V G+PCQ W+ + P+ H +TP R GLE+N+CRNPDGD GPWCYTT+P F C
Sbjct: 126 VGGLPCQAWSHKFPNDHK-YTPTL--RNGLEENFCRNPDGDPGGPWCYTTDPAVRFQSCG 182
Query: 183 VPQC 194
+ C
Sbjct: 183 IKSC 186
Score = 64.3 bits (155), Expect = 2e-10
Identities = 29/58 (50%), Positives = 35/58 (60%)
Frame = +3
Query: 6 AGVPCQEWAAQEPHRHSIFTPGTNPRAGLEKNYCRNPDGDDNGPWCYTTNPQKLFDYC 179
AGVPCQ W AQ PH+H FTP L +N+CRNPDG + PWC+T P +C
Sbjct: 300 AGVPCQRWDAQIPHQHR-FTPEKYACKDLRENFCRNPDGSE-APWCFTLRPGMRAAFC 355
>ref|NP_001010932.1| hepatocyte growth factor isoform 3 precursor [Homo sapiens]
Length = 723
Score = 210 bits (535), Expect = 2e-54
Identities = 120/325 (36%), Positives = 175/325 (53%), Gaps = 15/325 (4%)
Frame = +3
Query: 6 AGVPCQEWAA--QEPHRHSIFTPGTNPRAGLEKNYCRNPDGDDNGPWCYTTNPQKLFDYC 179
+G+ C W ++ HRH + P + L +NYCRNPD D +GPWCYT NP +DYC
Sbjct: 403 SGLTCSMWDKNMEDLHRHIFWEPDASK---LNENYCRNPDDDAHGPWCYTGNPLIPWDYC 459
Query: 180 DVPQCVTSS-----------FDCGKPKVEPKKCPARVVGGCVSIPHSWPWQISLRYRYRG 326
+ +C + C K K RVV G + + W +SLRYR +
Sbjct: 460 PISRCEGDTTPTIVNLDHPVISCAKTK------QLRVVNG-IPTRTNIGWMVSLRYRNK- 511
Query: 327 HFCGGTLISPEWVLTAKHCLEKSSSPSSYKVILGAHEEHRLGEGV--QEIDVSKLFKEPS 500
H CGG+LI WVLTA+ C S Y+ LG H+ H G+ Q ++VS+L P
Sbjct: 512 HICGGSLIKESWVLTARQCFP-SRDLKDYEAWLGIHDVHGRGDEKCKQVLNVSQLVYGPE 570
Query: 501 GADIALLKLSSPAVITDKVIPACLPTPNYVVADRTACYITGWGETKGTYGAGLLKEARLP 680
G+D+ L+KL+ PAV+ D V LP + ++T+C + GWG T GLL+ A L
Sbjct: 571 GSDLVLMKLARPAVLDDFVSTIDLPNYGCTIPEKTSCSVYGWGYTGLINYDGLLRVAHLY 630
Query: 681 VIENKVCNRYEYLDGKVSSKELCAGHLAGGIDSCQGDSGGPLVCFEKDKYILQGVTSWGL 860
++ N+ C+++ ++ E+CAG G C+GD GGPLVC + ++ GV G
Sbjct: 631 IMGNEKCSQHHRGKVTLNESEICAGAEKIGSGPCEGDYGGPLVCEQHKMRMVLGVIVPGR 690
Query: 861 GCALPNKPGVCVRVSRFVTWIEEIM 935
GCA+PN+PG+ VRV+ + WI +I+
Sbjct: 691 GCAIPNRPGIFVRVAYYAKWIHKII 715
Score = 76.6 bits (187), Expect = 4e-14
Identities = 30/70 (42%), Positives = 45/70 (64%)
Frame = +3
Query: 6 AGVPCQEWAAQEPHRHSIFTPGTNPRAGLEKNYCRNPDGDDNGPWCYTTNPQKLFDYCDV 185
+G+ CQ W++ PH HS L++NYCRNP G++ GPWC+T+NP+ ++ CD+
Sbjct: 145 SGIKCQPWSSMIPHEHSY------RGKDLQENYCRNPRGEEGGPWCFTSNPEVRYEVCDI 198
Query: 186 PQCVTSSFDC 215
PQC S +C
Sbjct: 199 PQC--SEVEC 206
Score = 72.8 bits (177), Expect = 6e-13
Identities = 32/80 (40%), Positives = 43/80 (53%)
Frame = +3
Query: 6 AGVPCQEWAAQEPHRHSIFTPGTNPRAGLEKNYCRNPDGDDNGPWCYTTNPQKLFDYCDV 185
+G CQ W Q PHRH F P P G + NYCRNPDG PWCYT +P ++YC +
Sbjct: 223 SGKICQRWDHQTPHRHK-FLPERYPDKGFDDNYCRNPDGQPR-PWCYTLDPHTRWEYCAI 280
Query: 186 PQCVTSSFDCGKPKVEPKKC 245
C ++ + +E +C
Sbjct: 281 KTCADNTMNDTDVPLETTEC 300
Score = 69.7 bits (169), Expect = 5e-12
Identities = 32/71 (45%), Positives = 43/71 (60%), Gaps = 2/71 (2%)
Frame = +3
Query: 9 GVPCQEWAAQEPHRHSIFTPGTNPRAGLEKNYCRNPDGDDNGPWCYTTNPQKLFDYC-DV 185
G+PCQ W +Q PH H + TP L +NYCRNPDG ++ PWC+TT+P YC +
Sbjct: 318 GIPCQRWDSQYPHEHDM-TPENFKCKDLRENYCRNPDGSES-PWCFTTDPNIRVGYCSQI 375
Query: 186 PQC-VTSSFDC 215
P C ++ DC
Sbjct: 376 PNCDMSHGQDC 386
>ref|NP_000592.3| hepatocyte growth factor isoform 1 preproprotein [Homo sapiens]
Length = 728
Score = 210 bits (535), Expect = 2e-54
Identities = 120/325 (36%), Positives = 175/325 (53%), Gaps = 15/325 (4%)
Frame = +3
Query: 6 AGVPCQEWAA--QEPHRHSIFTPGTNPRAGLEKNYCRNPDGDDNGPWCYTTNPQKLFDYC 179
+G+ C W ++ HRH + P + L +NYCRNPD D +GPWCYT NP +DYC
Sbjct: 408 SGLTCSMWDKNMEDLHRHIFWEPDASK---LNENYCRNPDDDAHGPWCYTGNPLIPWDYC 464
Query: 180 DVPQCVTSS-----------FDCGKPKVEPKKCPARVVGGCVSIPHSWPWQISLRYRYRG 326
+ +C + C K K RVV G + + W +SLRYR +
Sbjct: 465 PISRCEGDTTPTIVNLDHPVISCAKTK------QLRVVNG-IPTRTNIGWMVSLRYRNK- 516
Query: 327 HFCGGTLISPEWVLTAKHCLEKSSSPSSYKVILGAHEEHRLGEGV--QEIDVSKLFKEPS 500
H CGG+LI WVLTA+ C S Y+ LG H+ H G+ Q ++VS+L P
Sbjct: 517 HICGGSLIKESWVLTARQCFP-SRDLKDYEAWLGIHDVHGRGDEKCKQVLNVSQLVYGPE 575
Query: 501 GADIALLKLSSPAVITDKVIPACLPTPNYVVADRTACYITGWGETKGTYGAGLLKEARLP 680
G+D+ L+KL+ PAV+ D V LP + ++T+C + GWG T GLL+ A L
Sbjct: 576 GSDLVLMKLARPAVLDDFVSTIDLPNYGCTIPEKTSCSVYGWGYTGLINYDGLLRVAHLY 635
Query: 681 VIENKVCNRYEYLDGKVSSKELCAGHLAGGIDSCQGDSGGPLVCFEKDKYILQGVTSWGL 860
++ N+ C+++ ++ E+CAG G C+GD GGPLVC + ++ GV G
Sbjct: 636 IMGNEKCSQHHRGKVTLNESEICAGAEKIGSGPCEGDYGGPLVCEQHKMRMVLGVIVPGR 695
Query: 861 GCALPNKPGVCVRVSRFVTWIEEIM 935
GCA+PN+PG+ VRV+ + WI +I+
Sbjct: 696 GCAIPNRPGIFVRVAYYAKWIHKII 720
Score = 83.2 bits (204), Expect = 4e-16
Identities = 32/70 (45%), Positives = 48/70 (68%)
Frame = +3
Query: 6 AGVPCQEWAAQEPHRHSIFTPGTNPRAGLEKNYCRNPDGDDNGPWCYTTNPQKLFDYCDV 185
+G+ CQ W++ PH HS F P + L++NYCRNP G++ GPWC+T+NP+ ++ CD+
Sbjct: 145 SGIKCQPWSSMIPHEHS-FLPSSYRGKDLQENYCRNPRGEEGGPWCFTSNPEVRYEVCDI 203
Query: 186 PQCVTSSFDC 215
PQC S +C
Sbjct: 204 PQC--SEVEC 211
Score = 72.8 bits (177), Expect = 6e-13
Identities = 32/80 (40%), Positives = 43/80 (53%)
Frame = +3
Query: 6 AGVPCQEWAAQEPHRHSIFTPGTNPRAGLEKNYCRNPDGDDNGPWCYTTNPQKLFDYCDV 185
+G CQ W Q PHRH F P P G + NYCRNPDG PWCYT +P ++YC +
Sbjct: 228 SGKICQRWDHQTPHRHK-FLPERYPDKGFDDNYCRNPDGQPR-PWCYTLDPHTRWEYCAI 285
Query: 186 PQCVTSSFDCGKPKVEPKKC 245
C ++ + +E +C
Sbjct: 286 KTCADNTMNDTDVPLETTEC 305
Score = 69.7 bits (169), Expect = 5e-12
Identities = 32/71 (45%), Positives = 43/71 (60%), Gaps = 2/71 (2%)
Frame = +3
Query: 9 GVPCQEWAAQEPHRHSIFTPGTNPRAGLEKNYCRNPDGDDNGPWCYTTNPQKLFDYC-DV 185
G+PCQ W +Q PH H + TP L +NYCRNPDG ++ PWC+TT+P YC +
Sbjct: 323 GIPCQRWDSQYPHEHDM-TPENFKCKDLRENYCRNPDGSES-PWCFTTDPNIRVGYCSQI 380
Query: 186 PQC-VTSSFDC 215
P C ++ DC
Sbjct: 381 PNCDMSHGQDC 391
>ref|NP_892028.1| hepsin (transmembrane protease, serine 1) [Homo sapiens]
Length = 417
Score = 204 bits (520), Expect = 9e-53
Identities = 129/335 (38%), Positives = 180/335 (53%), Gaps = 23/335 (6%)
Frame = +3
Query: 3 VAGVPCQEWAAQEPHRHS---IFTPGTNPRAGLEKNYCRNPDGDDNGPWCYTTNPQKLFD 173
VAG+ C+E HS + T G N +G +C D G +T ++
Sbjct: 85 VAGLSCEEMGFLRALTHSELDVRTAGANGTSGF---FCV-----DEGRLPHTQRLLEVIS 136
Query: 174 YCDVPQ---CVTSSFDCGKPKVEPKKCPARVVGGCVSIPHSWPWQISLRYRYRGHFCGGT 344
CD P+ DCG+ K+ R+VGG + WPWQ+SLRY H CGG+
Sbjct: 137 VCDCPRGRFLAAICQDCGRRKLPVD----RIVGGRDTSLGRWPWQVSLRYD-GAHLCGGS 191
Query: 345 LISPEWVLTAKHCL-EKSSSPSSYKVILGAHEE---HRLGEGVQEIDVSK---LFKEPSG 503
L+S +WVLTA HC E++ S ++V GA + H L GVQ + F++P+
Sbjct: 192 LLSGDWVLTAAHCFPERNRVLSRWRVFAGAVAQASPHGLQLGVQAVVYHGGYLPFRDPNS 251
Query: 504 A----DIALLKLSSPAVITDKVIPACLPTPNYVVADRTACYITGWGETKGTYG--AGLLK 665
DIAL+ LSSP +T+ + P CLP + D C +TGWG T+ YG AG+L+
Sbjct: 252 EENSNDIALVHLSSPLPLTEYIQPVCLPAAGQALVDGKICTVTGWGNTQ-YYGQQAGVLQ 310
Query: 666 EARLPVIENKVCNRYEYLDGKVSSKELCAGHLAGGIDSCQGDSGGPLVCFEK----DKYI 833
EAR+P+I N VCN ++ ++ K CAG+ GGID+CQGDSGGP VC + ++
Sbjct: 311 EARVPIISNDVCNGADFYGNQIKPKMFCAGYPEGGIDACQGDSGGPFVCEDSISRTPRWR 370
Query: 834 LQGVTSWGLGCALPNKPGVCVRVSRFVTWIEEIMR 938
L G+ SWG GCAL KPGV +VS F WI + ++
Sbjct: 371 LCGIVSWGTGCALAQKPGVYTKVSDFREWIFQAIK 405
>ref|NP_002142.1| hepsin (transmembrane protease, serine 1) [Homo sapiens]
Length = 417
Score = 204 bits (520), Expect = 9e-53
Identities = 129/335 (38%), Positives = 180/335 (53%), Gaps = 23/335 (6%)
Frame = +3
Query: 3 VAGVPCQEWAAQEPHRHS---IFTPGTNPRAGLEKNYCRNPDGDDNGPWCYTTNPQKLFD 173
VAG+ C+E HS + T G N +G +C D G +T ++
Sbjct: 85 VAGLSCEEMGFLRALTHSELDVRTAGANGTSGF---FCV-----DEGRLPHTQRLLEVIS 136
Query: 174 YCDVPQ---CVTSSFDCGKPKVEPKKCPARVVGGCVSIPHSWPWQISLRYRYRGHFCGGT 344
CD P+ DCG+ K+ R+VGG + WPWQ+SLRY H CGG+
Sbjct: 137 VCDCPRGRFLAAICQDCGRRKLPVD----RIVGGRDTSLGRWPWQVSLRYD-GAHLCGGS 191
Query: 345 LISPEWVLTAKHCL-EKSSSPSSYKVILGAHEE---HRLGEGVQEIDVSK---LFKEPSG 503
L+S +WVLTA HC E++ S ++V GA + H L GVQ + F++P+
Sbjct: 192 LLSGDWVLTAAHCFPERNRVLSRWRVFAGAVAQASPHGLQLGVQAVVYHGGYLPFRDPNS 251
Query: 504 A----DIALLKLSSPAVITDKVIPACLPTPNYVVADRTACYITGWGETKGTYG--AGLLK 665
DIAL+ LSSP +T+ + P CLP + D C +TGWG T+ YG AG+L+
Sbjct: 252 EENSNDIALVHLSSPLPLTEYIQPVCLPAAGQALVDGKICTVTGWGNTQ-YYGQQAGVLQ 310
Query: 666 EARLPVIENKVCNRYEYLDGKVSSKELCAGHLAGGIDSCQGDSGGPLVCFEK----DKYI 833
EAR+P+I N VCN ++ ++ K CAG+ GGID+CQGDSGGP VC + ++
Sbjct: 311 EARVPIISNDVCNGADFYGNQIKPKMFCAGYPEGGIDACQGDSGGPFVCEDSISRTPRWR 370
Query: 834 LQGVTSWGLGCALPNKPGVCVRVSRFVTWIEEIMR 938
L G+ SWG GCAL KPGV +VS F WI + ++
Sbjct: 371 LCGIVSWGTGCALAQKPGVYTKVSDFREWIFQAIK 405
>ref|NP_115780.1| transmembrane protease, serine 3 isoform 2 [Homo sapiens]
Length = 327
Score = 192 bits (488), Expect = 5e-49
Identities = 99/238 (41%), Positives = 142/238 (59%), Gaps = 6/238 (2%)
Frame = +3
Query: 249 ARVVGGCVSIPHSWPWQISLRYRYRGHFCGGTLISPEWVLTAKHCLEKSSSPSSYKVILG 428
+R+VGG +S+ WPWQ SL+++ H CGG++I+P W++TA HC+ P S+ + +G
Sbjct: 88 SRIVGGNMSLLSQWPWQASLQFQGY-HLCGGSVITPLWIITAAHCVYDLYLPKSWTIQVG 146
Query: 429 AH---EEHRLGEGVQEIDVSKLFKEPS-GADIALLKLSSPAVITDKVIPACLPTPNYVVA 596
+ V++I +K G DIAL+KL+ P + + P CLP
Sbjct: 147 LVSLLDNPAPSHLVEKIVYHSKYKPKRLGNDIALMKLAGPLTFNEMIQPVCLPNSEENFP 206
Query: 597 DRTACYITGWGETKGTYG--AGLLKEARLPVIENKVCNRYEYLDGKVSSKELCAGHLAGG 770
D C+ +GWG T+ G + +L A +P+I NK+CN + G +S LCAG+L GG
Sbjct: 207 DGKVCWTSGWGATEDGAGDASPVLNHAAVPLISNKICNHRDVYGGIISPSMLCAGYLTGG 266
Query: 771 IDSCQGDSGGPLVCFEKDKYILQGVTSWGLGCALPNKPGVCVRVSRFVTWIEEIMRRN 944
+DSCQGDSGGPLVC E+ + L G TS+G+GCA NKPGV RV+ F+ WI E M R+
Sbjct: 267 VDSCQGDSGGPLVCQERRLWKLVGATSFGIGCAEVNKPGVYTRVTSFLDWIHEQMERD 324
Database: RefSeqHP
Posted date: Aug 2, 2006 12:57 AM
Number of letters in database: 17,774,539
Number of sequences in database: 39,411
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 53,508,559
Number of Sequences: 39411
Number of extensions: 1557109
Number of successful extensions: 5863
Number of sequences better than 1.0e-05: 10
Number of HSP's better than 0.0 without gapping: 4255
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5211
length of database: 17,774,539
effective HSP length: 104
effective length of database: 13,675,795
effective search space used: 4089062705
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
Search to RefSeqMP
BLASTX 2.2.10 [Oct-19-2004]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= LVR01_0062_H12
(1212 letters)
Database: RefSeqMP
45,328 sequences; 21,768,885 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_032903.2| plasminogen [Mus musculus] 548 e-156
Alignment gi|NP_032269.2| macrophage stimulating 1 (hepatocyte growth fac... 240 2e-63
Alignment gi|NP_034557.2| hepatocyte growth factor [Mus musculus] 208 8e-54
Alignment gi|NP_032307.1| hepsin [Mus musculus] 196 5e-50
Alignment gi|NP_542765.1| transmembrane protease, serine 3 [Mus musculus] 191 2e-48
Alignment gi|NP_038949.2| transmembrane protease, serine 8 (intestinal) [... 187 2e-47
Alignment gi|XP_926294.1| PREDICTED: similar to protease, serine, 33 isof... 184 2e-46
Alignment gi|XP_926285.1| PREDICTED: similar to protease, serine, 33 isof... 184 2e-46
Alignment gi|XP_914273.1| PREDICTED: similar to protease, serine, 33 isof... 184 2e-46
Alignment gi|XP_983154.1| PREDICTED: protease, serine, 33 isoform 3 [Mus ... 184 2e-46
>ref|NP_032903.2| plasminogen [Mus musculus]
Length = 812
Score = 548 bits (1413), Expect = e-156
Identities = 255/315 (80%), Positives = 275/315 (87%), Gaps = 2/315 (0%)
Frame = +3
Query: 6 AGVPCQEWAAQEPHRHSIFTPGTNPRAGLEKNYCRNPDGDDNGPWCYTTNPQKLFDYCDV 185
AG PCQ WAAQEPHRHSIFTP TNPRAGLEKNYCRNPDGD NGPWCYTTNP+KL+DYCD+
Sbjct: 498 AGTPCQGWAAQEPHRHSIFTPQTNPRAGLEKNYCRNPDGDVNGPWCYTTNPRKLYDYCDI 557
Query: 186 PQCVT-SSFDCGKPKVEPKKCPARVVGGCVSIPHSWPWQISLRYRYRG-HFCGGTLISPE 359
P C + SSF+CGKP+VEPKKCP RVVGGCV+ PHSWPWQISLR R+ G HFCGGTLI+PE
Sbjct: 558 PLCASASSFECGKPQVEPKKCPGRVVGGCVANPHSWPWQISLRTRFTGQHFCGGTLIAPE 617
Query: 360 WVLTAKHCLEKSSSPSSYKVILGAHEEHRLGEGVQEIDVSKLFKEPSGADIALLKLSSPA 539
WVLTA HCLEKSS P YKVILGAHEE+ G VQEI V+KL EP+ DIALLKLS PA
Sbjct: 618 WVLTAAHCLEKSSRPEFYKVILGAHEEYIRGSDVQEISVAKLILEPNNRDIALLKLSRPA 677
Query: 540 VITDKVIPACLPTPNYVVADRTACYITGWGETKGTYGAGLLKEARLPVIENKVCNRYEYL 719
ITDKVIPACLP+PNY+VADRT CYITGWGET+GT+GAG LKEA+LPVIENKVCNR EYL
Sbjct: 678 TITDKVIPACLPSPNYMVADRTICYITGWGETQGTFGAGRLKEAQLPVIENKVCNRVEYL 737
Query: 720 DGKVSSKELCAGHLAGGIDSCQGDSGGPLVCFEKDKYILQGVTSWGLGCALPNKPGVCVR 899
+ +V S ELCAG LAGG+DSCQGDSGGPLVCFEKDKYILQGVTSWGLGCA PNKPGV VR
Sbjct: 738 NNRVKSTELCAGQLAGGVDSCQGDSGGPLVCFEKDKYILQGVTSWGLGCARPNKPGVYVR 797
Query: 900 VSRFVTWIEEIMRRN 944
VSRFV WIE MR N
Sbjct: 798 VSRFVDWIEREMRNN 812
Score = 99.8 bits (247), Expect = 5e-21
Identities = 40/78 (51%), Positives = 53/78 (67%)
Frame = +3
Query: 6 AGVPCQEWAAQEPHRHSIFTPGTNPRAGLEKNYCRNPDGDDNGPWCYTTNPQKLFDYCDV 185
+GV CQ+W A PH + ++P T+P GLE+NYCRNPD D+ GPWCYTT+P K +DYC++
Sbjct: 120 SGVACQKWGATFPHVPN-YSPSTHPNEGLEENYCRNPDNDEQGPWCYTTDPDKRYDYCNI 178
Query: 186 PQCVTSSFDCGKPKVEPK 239
P+C C K E K
Sbjct: 179 PECEEECMYCSGEKYEGK 196
Score = 86.7 bits (213), Expect = 5e-17
Identities = 38/64 (59%), Positives = 45/64 (70%)
Frame = +3
Query: 3 VAGVPCQEWAAQEPHRHSIFTPGTNPRAGLEKNYCRNPDGDDNGPWCYTTNPQKLFDYCD 182
+ G CQ WAA PHRHS TP P AGLE NYCRNPDGD GPWCYTT+P ++YC+
Sbjct: 393 ITGKKCQSWAAMFPHRHSK-TPENFPDAGLEMNYCRNPDGD-KGPWCYTTDPSVRWEYCN 450
Query: 183 VPQC 194
+ +C
Sbjct: 451 LKRC 454
Score = 82.4 bits (202), Expect = 9e-16
Identities = 35/68 (51%), Positives = 47/68 (69%)
Frame = +3
Query: 3 VAGVPCQEWAAQEPHRHSIFTPGTNPRAGLEKNYCRNPDGDDNGPWCYTTNPQKLFDYCD 182
V+G CQ W+ Q PHRH+ TP P LE+NYCRNPDG+ PWCYTT+ Q ++YC+
Sbjct: 291 VSGKTCQRWSEQTPHRHNR-TPENFPCKNLEENYCRNPDGE-TAPWCYTTDSQLRWEYCE 348
Query: 183 VPQCVTSS 206
+P C +S+
Sbjct: 349 IPSCESSA 356
Score = 82.0 bits (201), Expect = 1e-15
Identities = 32/66 (48%), Positives = 45/66 (68%)
Frame = +3
Query: 3 VAGVPCQEWAAQEPHRHSIFTPGTNPRAGLEKNYCRNPDGDDNGPWCYTTNPQKLFDYCD 182
++G+ CQ W +Q PH H + P P L+ NYCRNPDG+ PWC+TT+P K ++YCD
Sbjct: 201 MSGLDCQAWDSQSPHAHG-YIPAKFPSKNLKMNYCRNPDGEPR-PWCFTTDPTKRWEYCD 258
Query: 183 VPQCVT 200
+P+C T
Sbjct: 259 IPRCTT 264
>ref|NP_032269.2| macrophage stimulating 1 (hepatocyte growth factor-like) [Mus
musculus]
Length = 716
Score = 240 bits (612), Expect = 2e-63
Identities = 134/327 (40%), Positives = 186/327 (56%), Gaps = 17/327 (5%)
Frame = +3
Query: 9 GVPCQEWAAQEPHRHSIFTPGTNPRAGLEKNYCRNPDGDDNGPWCYTTNPQKLFDYCDVP 188
GV CQ W+++ PH+ FTP + P+AGLE N+CRNPDGD +GPWCYT +P LFDYC +
Sbjct: 397 GVQCQHWSSETPHKPQ-FTPTSAPQAGLEANFCRNPDGDSHGPWCYTLDPDILFDYCALQ 455
Query: 189 QC----VTSSFD---------CGKPKVEPKKCPARVVGGCVSIPHSWPWQISLRYRYRGH 329
+C S D CGK +V+ K RVVGG P + PW +SLR R H
Sbjct: 456 RCDDDQPPSILDPPDQVVFEKCGK-RVD-KSNKLRVVGG---HPGNSPWTVSLRNRQGQH 510
Query: 330 FCGGTLISPEWVLTAKHCLEKSSSP-SSYKVILGA-HEEHRLGE-GVQEIDVSKLFKEPS 500
FCGG+L+ +WVLTA+ C+ P + Y+V LG ++ + GE +Q + V+K P+
Sbjct: 511 FCGGSLVKEQWVLTARQCIWSCHEPLTGYEVWLGTINQNPQPGEANLQRVPVAKAVCGPA 570
Query: 501 GADIALLKLSSPAVITDKVIPACLPTPNYVVADRTACYITGWGETKGTYGAGLLKEARLP 680
G+ + LLKL P ++ V CLP YVV T C I GWGE+ GT +L A +
Sbjct: 571 GSQLVLLKLERPVILNHHVALICLPPEQYVVPPGTKCEIAGWGESIGTSNNTVLHVASMN 630
Query: 681 VIENKVCN-RYEYLDGKVSSKELCAGHLAGGIDSCQGDSGGPLVCFEKDKYILQGVTSWG 857
VI N+ CN +Y G + E+C + + +C+GD GGPL C+ D ++LQG+
Sbjct: 631 VISNQECNTKYR---GHIQESEICPQGMVVPVGACEGDYGGPLACYTHDCWVLQGLIIPN 687
Query: 858 LGCALPNKPGVCVRVSRFVTWIEEIMR 938
CA P P + RV FV WI ++M+
Sbjct: 688 RVCARPRWPAIFTRVFVFVDWINKVMQ 714
Score = 77.0 bits (188), Expect = 4e-14
Identities = 32/62 (51%), Positives = 41/62 (66%)
Frame = +3
Query: 9 GVPCQEWAAQEPHRHSIFTPGTNPRAGLEKNYCRNPDGDDNGPWCYTTNPQKLFDYCDVP 188
G+PCQ W+ + P+ H +TP P+ GLE+N+CRNPDGD GPWCYTTN F C +
Sbjct: 128 GLPCQAWSRRFPNDHK-YTP--TPKNGLEENFCRNPDGDPRGPWCYTTNRSVRFQSCGIK 184
Query: 189 QC 194
C
Sbjct: 185 TC 186
Score = 68.2 bits (165), Expect = 2e-11
Identities = 30/63 (47%), Positives = 37/63 (58%)
Frame = +3
Query: 6 AGVPCQEWAAQEPHRHSIFTPGTNPRAGLEKNYCRNPDGDDNGPWCYTTNPQKLFDYCDV 185
+G CQ W Q PH H F P L+ NYCRNPDG + PWCYTT+P ++CD+
Sbjct: 208 SGRECQRWDLQHPHSHP-FQPEKFLDKDLKDNYCRNPDGSER-PWCYTTDPNVEREFCDL 265
Query: 186 PQC 194
P C
Sbjct: 266 PSC 268
Score = 67.8 bits (164), Expect = 2e-11
Identities = 30/64 (46%), Positives = 39/64 (60%), Gaps = 1/64 (1%)
Frame = +3
Query: 6 AGVPCQEWAAQEPHRHSIFTPGTNPRAGLEKNYCRNPDGDDNGPWCYTTNPQKLFDYC-D 182
AGVPCQ W AQ PH+H F P L +N+CRNPDG + PWC+T+ P +C
Sbjct: 309 AGVPCQRWDAQSPHQHR-FVPEKYACKDLRENFCRNPDGSE-APWCFTSRPGLRMAFCHQ 366
Query: 183 VPQC 194
+P+C
Sbjct: 367 IPRC 370
>ref|NP_034557.2| hepatocyte growth factor [Mus musculus]
Length = 728
Score = 208 bits (530), Expect = 8e-54
Identities = 115/326 (35%), Positives = 176/326 (53%), Gaps = 16/326 (4%)
Frame = +3
Query: 6 AGVPCQEWAA--QEPHRHSIFTPGTNPRAGLEKNYCRNPDGDDNGPWCYTTNPQKLFDYC 179
+G+ C W ++ HRH + P + L KNYCRNPD D +GPWCYT NP +DYC
Sbjct: 409 SGLTCSMWDKNMEDLHRHIFWEPDASK---LNKNYCRNPDDDAHGPWCYTGNPLIPWDYC 465
Query: 180 DVPQCVTSS-----------FDCGKPKVEPKKCPARVVGGCVSIPHSWPWQISLRYRYRG 326
+ +C + C K K RVV G + + W +SL+YR +
Sbjct: 466 PISRCEGDTTPTIVNLDHPVISCAKTK------QLRVVNG-IPTQTTVGWMVSLKYRNK- 517
Query: 327 HFCGGTLISPEWVLTAKHCLE-KSSSPSSYKVILGAHEEHRLGEGVQE--IDVSKLFKEP 497
H CGG+LI WV+TA+ C ++ Y+ LG H+ H GE ++ +++S+L P
Sbjct: 518 HICGGSLIKESWVITARQCFPARNKDLKDYEAWLGIHDVHERGEEKRKQILNISQLVYGP 577
Query: 498 SGADIALLKLSSPAVITDKVIPACLPTPNYVVADRTACYITGWGETKGTYGAGLLKEARL 677
G+D+ LLKL+ PA++ + V LP+ + ++T C I GWG T GLL+ A L
Sbjct: 578 EGSDLVLLKLARPAILDNFVSTIDLPSYGCTIPEKTTCSIYGWGYTGLINADGLLRVAHL 637
Query: 678 PVIENKVCNRYEYLDGKVSSKELCAGHLAGGIDSCQGDSGGPLVCFEKDKYILQGVTSWG 857
++ N+ C+++ ++ ELCAG G C+GD GGPL+C + ++ GV G
Sbjct: 638 YIMGNEKCSQHHQGKVTLNESELCAGAEKIGSGPCEGDYGGPLICEQHKMRMVLGVIVPG 697
Query: 858 LGCALPNKPGVCVRVSRFVTWIEEIM 935
GCA+PN+P + VRV+ + WI +++
Sbjct: 698 RGCAIPNRPVIFVRVAYYAKWIHKVI 723
Score = 82.0 bits (201), Expect = 1e-15
Identities = 32/70 (45%), Positives = 47/70 (67%)
Frame = +3
Query: 6 AGVPCQEWAAQEPHRHSIFTPGTNPRAGLEKNYCRNPDGDDNGPWCYTTNPQKLFDYCDV 185
+G+ CQ W + PH HS F P + L++NYCRNP G++ GPWC+T+NP+ ++ CD+
Sbjct: 146 SGIKCQPWNSMIPHEHS-FLPSSYRGKDLQENYCRNPRGEEGGPWCFTSNPEVRYEVCDI 204
Query: 186 PQCVTSSFDC 215
PQC S +C
Sbjct: 205 PQC--SEVEC 212
Score = 74.3 bits (181), Expect = 2e-13
Identities = 35/71 (49%), Positives = 46/71 (64%), Gaps = 2/71 (2%)
Frame = +3
Query: 9 GVPCQEWAAQEPHRHSIFTPGTNPRAGLEKNYCRNPDGDDNGPWCYTTNPQKLFDYC-DV 185
G+PCQ W +Q PH+H I TP L +NYCRNPDG ++ PWC+TT+P YC +
Sbjct: 324 GIPCQRWDSQYPHKHDI-TPENFKCKDLRENYCRNPDGAES-PWCFTTDPNIRVGYCSQI 381
Query: 186 PQC-VTSSFDC 215
P+C V+S DC
Sbjct: 382 PKCDVSSGQDC 392
Score = 73.9 bits (180), Expect = 3e-13
Identities = 33/80 (41%), Positives = 43/80 (53%)
Frame = +3
Query: 6 AGVPCQEWAAQEPHRHSIFTPGTNPRAGLEKNYCRNPDGDDNGPWCYTTNPQKLFDYCDV 185
+G CQ W Q PHRH F P P G + NYCRNPDG PWCYT +P ++YC +
Sbjct: 229 SGKTCQRWDQQTPHRHK-FLPERYPDKGFDDNYCRNPDGKPR-PWCYTLDPDTTWEYCAI 286
Query: 186 PQCVTSSFDCGKPKVEPKKC 245
C S+ + +E +C
Sbjct: 287 KTCAHSAVNETDVPMETTEC 306
>ref|NP_032307.1| hepsin [Mus musculus]
Length = 416
Score = 196 bits (497), Expect = 5e-50
Identities = 127/333 (38%), Positives = 174/333 (52%), Gaps = 26/333 (7%)
Frame = +3
Query: 3 VAGVPCQEWAAQEPHRHS---IFTPGTNPRAGLEKNYCRNPDGDDNGPWCYTTNPQKLFD 173
VAG+ C+E HS + T G N +G +C + G Q+L D
Sbjct: 84 VAGLGCEEMGFLRALAHSELDVRTAGANGTSGF---FCVDEGG--------LPLAQRLLD 132
Query: 174 YCDVPQCVTSSF------DCGKPKVEPKKCPARVVGGCVSIPHSWPWQISLRYRYRGHFC 335
V C F DCG+ K+ R+VGG S WPWQ+SLRY H C
Sbjct: 133 VISVCDCPRGRFLTATCQDCGRRKLPVD----RIVGGQDSSLGRWPWQVSLRYDGT-HLC 187
Query: 336 GGTLISPEWVLTAKHCL-EKSSSPSSYKVILGA---HEEHRLGEGVQEIDVSK---LFKE 494
GG+L+S +WVLTA HC E++ S ++V GA H + GVQ + F++
Sbjct: 188 GGSLLSGDWVLTAAHCFPERNRVLSRWRVFAGAVARTSPHAVQLGVQAVIYHGGYLPFRD 247
Query: 495 PS----GADIALLKLSSPAVITDKVIPACLPTPNYVVADRTACYITGWGETKGTYG--AG 656
P+ DIAL+ LSS +T+ + P CLP + D C +TGWG T+ YG A
Sbjct: 248 PTIDENSNDIALVHLSSSLPLTEYIQPVCLPAAGQALVDGKVCTVTGWGNTQ-FYGQQAM 306
Query: 657 LLKEARLPVIENKVCNRYEYLDGKVSSKELCAGHLAGGIDSCQGDSGGPLVCFEK----D 824
+L+EAR+P+I N+VCN ++ ++ K CAG+ GGID+CQGDSGGP VC +
Sbjct: 307 VLQEARVPIISNEVCNSPDFYGNQIKPKMFCAGYPEGGIDACQGDSGGPFVCEDSISGTS 366
Query: 825 KYILQGVTSWGLGCALPNKPGVCVRVSRFVTWI 923
++ L G+ SWG GCAL KPGV +V+ F WI
Sbjct: 367 RWRLCGIVSWGTGCALARKPGVYTKVTDFREWI 399
>ref|NP_542765.1| transmembrane protease, serine 3 [Mus musculus]
Length = 453
Score = 191 bits (484), Expect = 2e-48
Identities = 101/238 (42%), Positives = 142/238 (59%), Gaps = 7/238 (2%)
Frame = +3
Query: 252 RVVGGCVSIPHSWPWQISLRYRYRGHFCGGTLISPEWVLTAKHCLEKSSSPSSYKVILG- 428
R+VGG +S WPWQ+SL+++ H CGG++I+P W++TA HC+ P S+ V +G
Sbjct: 216 RIVGGNMSSLTQWPWQVSLQFQGY-HLCGGSIITPLWIVTAAHCVYDLYHPKSWTVQVGL 274
Query: 429 -----AHEEHRLGEGVQEIDVSKLFKEPSGADIALLKLSSPAVITDKVIPACLPTPNYVV 593
+ L E + I SK + G DIAL+KLS P + + P CLP
Sbjct: 275 VSLMDSPVPSHLVEKI--IYHSKYKPKRLGNDIALMKLSEPLTFDETIQPICLPNSEENF 332
Query: 594 ADRTACYITGWGETK-GTYGAGLLKEARLPVIENKVCNRYEYLDGKVSSKELCAGHLAGG 770
D C+ +GWG T+ G + +L A +P+I NK+CN + G +S LCAG+L GG
Sbjct: 333 PDGKLCWTSGWGATEDGGDASPVLNHAAVPLISNKICNHRDVYGGIISPSMLCAGYLKGG 392
Query: 771 IDSCQGDSGGPLVCFEKDKYILQGVTSWGLGCALPNKPGVCVRVSRFVTWIEEIMRRN 944
+DSCQGDSGGPLVC E+ + L G TS+G+GCA NKPGV R++ F+ WI E + R+
Sbjct: 393 VDSCQGDSGGPLVCQERRLWKLVGATSFGIGCAEVNKPGVYTRITSFLDWIHEQLERD 450
>ref|NP_038949.2| transmembrane protease, serine 8 (intestinal) [Mus musculus]
Length = 310
Score = 187 bits (475), Expect = 2e-47
Identities = 99/248 (39%), Positives = 141/248 (56%), Gaps = 14/248 (5%)
Frame = +3
Query: 252 RVVGGCVSIPHSWPWQISLRYRYRGHFCGGTLISPEWVLTAKHCLEKSSSPSSYKVILGA 431
++VGG ++ WPWQ+SL GH CGG+LI WVLTA HC +S +PS Y V +G
Sbjct: 36 KIVGGQDALEGQWPWQVSLWITEDGHICGGSLIHEVWVLTAAHCFRRSLNPSFYHVKVGG 95
Query: 432 H-----EEHRLGEGVQEIDV--SKLFKEPSGADIALLKLSSPAVITDKVIPACLPTPNYV 590
E H V+ I V + L+ + S DIAL++L +P + + P CLP
Sbjct: 96 LTLSLLEPHSTLVAVRNIFVHPTYLWADASSGDIALVQLDTP-LRPSQFTPVCLPAAQTP 154
Query: 591 VADRTACYITGWGETKGTYGAGLLKEARLPVIENKVCNRYEYLDGK-------VSSKELC 749
+ T C++TGWG T+ A +L+E +P+++++ C + + G + S LC
Sbjct: 155 LTPGTVCWVTGWGATQERDMASVLQELAVPLLDSEDCEKMYHTQGSSLSGERIIQSDMLC 214
Query: 750 AGHLAGGIDSCQGDSGGPLVCFEKDKYILQGVTSWGLGCALPNKPGVCVRVSRFVTWIEE 929
AG++ G DSCQGDSGGPLVC + G+TSWG+GCA P +PGV RV +V WI+
Sbjct: 215 AGYVEGQKDSCQGDSGGPLVCSINSSWTQVGITSWGIGCARPYRPGVYTRVPTYVDWIQR 274
Query: 930 IMRRN*SD 953
I+ N SD
Sbjct: 275 ILAENHSD 282
>ref|XP_926294.1| PREDICTED: similar to protease, serine, 33 isoform 5 [Mus musculus]
Length = 293
Score = 184 bits (466), Expect = 2e-46
Identities = 98/256 (38%), Positives = 143/256 (55%), Gaps = 18/256 (7%)
Frame = +3
Query: 213 CGKPKVEPKKCPARVVGGCVSIPHSWPWQISLRYRYRGHFCGGTLISPEWVLTAKHCLEK 392
CG+P++ +R+VGG + WPWQ S+++R H CGG+LI+P+WVLTA HC +
Sbjct: 41 CGQPRMS-----SRIVGGRDAQDGEWPWQTSIQHR-GAHVCGGSLIAPQWVLTAGHCFPR 94
Query: 393 SSSPSSYKVILGA-----HEEHRLGEGVQEIDVSKLFKEPSG-ADIALLKLSSPAVITDK 554
PS Y V+LGA H L V + + + E D+ALL+L P ++ +
Sbjct: 95 RVWPSEYSVLLGALSLDVRSSHELLVPVLRVLLPPDYSEDEARGDLALLQLRHPVSLSTR 154
Query: 555 VIPACLPTPNYVVADRTACYITGWGETKGTYGAGL-----LKEARLPVIENKVCNRYEYL 719
+ P CLP P + C++TGWG G L L+ R+P+++++ C+R ++
Sbjct: 155 IQPVCLPAPGSHPPPGSPCWVTGWGSLSP--GVPLPKGRPLQGVRVPLLDSRACDRLYHV 212
Query: 720 DGKVSSKE-------LCAGHLAGGIDSCQGDSGGPLVCFEKDKYILQGVTSWGLGCALPN 878
V E LCAG+ G D+CQGDSGGPL C E ++L GV SWG GCALPN
Sbjct: 213 GANVPQGERIVLPGNLCAGYRRGHKDACQGDSGGPLTCMESGHWVLVGVVSWGKGCALPN 272
Query: 879 KPGVCVRVSRFVTWIE 926
+PGV V+++ WI+
Sbjct: 273 RPGVYTNVAKYSPWIQ 288
>ref|XP_926285.1| PREDICTED: similar to protease, serine, 33 isoform 4 [Mus musculus]
Length = 259
Score = 184 bits (466), Expect = 2e-46
Identities = 98/256 (38%), Positives = 143/256 (55%), Gaps = 18/256 (7%)
Frame = +3
Query: 213 CGKPKVEPKKCPARVVGGCVSIPHSWPWQISLRYRYRGHFCGGTLISPEWVLTAKHCLEK 392
CG+P++ +R+VGG + WPWQ S+++R H CGG+LI+P+WVLTA HC +
Sbjct: 7 CGQPRMS-----SRIVGGRDAQDGEWPWQTSIQHR-GAHVCGGSLIAPQWVLTAGHCFPR 60
Query: 393 SSSPSSYKVILGA-----HEEHRLGEGVQEIDVSKLFKEPSG-ADIALLKLSSPAVITDK 554
PS Y V+LGA H L V + + + E D+ALL+L P ++ +
Sbjct: 61 RVWPSEYSVLLGALSLDVRSSHELLVPVLRVLLPPDYSEDEARGDLALLQLRHPVSLSTR 120
Query: 555 VIPACLPTPNYVVADRTACYITGWGETKGTYGAGL-----LKEARLPVIENKVCNRYEYL 719
+ P CLP P + C++TGWG G L L+ R+P+++++ C+R ++
Sbjct: 121 IQPVCLPAPGSHPPPGSPCWVTGWGSLSP--GVPLPKGRPLQGVRVPLLDSRACDRLYHV 178
Query: 720 DGKVSSKE-------LCAGHLAGGIDSCQGDSGGPLVCFEKDKYILQGVTSWGLGCALPN 878
V E LCAG+ G D+CQGDSGGPL C E ++L GV SWG GCALPN
Sbjct: 179 GANVPQGERIVLPGNLCAGYRRGHKDACQGDSGGPLTCMESGHWVLVGVVSWGKGCALPN 238
Query: 879 KPGVCVRVSRFVTWIE 926
+PGV V+++ WI+
Sbjct: 239 RPGVYTNVAKYSPWIQ 254
>ref|XP_914273.1| PREDICTED: similar to protease, serine, 33 isoform 3 [Mus musculus]
Length = 277
Score = 184 bits (466), Expect = 2e-46
Identities = 98/256 (38%), Positives = 143/256 (55%), Gaps = 18/256 (7%)
Frame = +3
Query: 213 CGKPKVEPKKCPARVVGGCVSIPHSWPWQISLRYRYRGHFCGGTLISPEWVLTAKHCLEK 392
CG+P++ +R+VGG + WPWQ S+++R H CGG+LI+P+WVLTA HC +
Sbjct: 25 CGQPRMS-----SRIVGGRDAQDGEWPWQTSIQHR-GAHVCGGSLIAPQWVLTAGHCFPR 78
Query: 393 SSSPSSYKVILGA-----HEEHRLGEGVQEIDVSKLFKEPSG-ADIALLKLSSPAVITDK 554
PS Y V+LGA H L V + + + E D+ALL+L P ++ +
Sbjct: 79 RVWPSEYSVLLGALSLDVRSSHELLVPVLRVLLPPDYSEDEARGDLALLQLRHPVSLSTR 138
Query: 555 VIPACLPTPNYVVADRTACYITGWGETKGTYGAGL-----LKEARLPVIENKVCNRYEYL 719
+ P CLP P + C++TGWG G L L+ R+P+++++ C+R ++
Sbjct: 139 IQPVCLPAPGSHPPPGSPCWVTGWGSLSP--GVPLPKGRPLQGVRVPLLDSRACDRLYHV 196
Query: 720 DGKVSSKE-------LCAGHLAGGIDSCQGDSGGPLVCFEKDKYILQGVTSWGLGCALPN 878
V E LCAG+ G D+CQGDSGGPL C E ++L GV SWG GCALPN
Sbjct: 197 GANVPQGERIVLPGNLCAGYRRGHKDACQGDSGGPLTCMESGHWVLVGVVSWGKGCALPN 256
Query: 879 KPGVCVRVSRFVTWIE 926
+PGV V+++ WI+
Sbjct: 257 RPGVYTNVAKYSPWIQ 272
>ref|XP_983154.1| PREDICTED: protease, serine, 33 isoform 3 [Mus musculus]
Length = 310
Score = 184 bits (466), Expect = 2e-46
Identities = 98/256 (38%), Positives = 143/256 (55%), Gaps = 18/256 (7%)
Frame = +3
Query: 213 CGKPKVEPKKCPARVVGGCVSIPHSWPWQISLRYRYRGHFCGGTLISPEWVLTAKHCLEK 392
CG+P++ +R+VGG + WPWQ S+++R H CGG+LI+P+WVLTA HC +
Sbjct: 58 CGQPRMS-----SRIVGGRDAQDGEWPWQTSIQHR-GAHVCGGSLIAPQWVLTAGHCFPR 111
Query: 393 SSSPSSYKVILGA-----HEEHRLGEGVQEIDVSKLFKEPSG-ADIALLKLSSPAVITDK 554
PS Y V+LGA H L V + + + E D+ALL+L P ++ +
Sbjct: 112 RVWPSEYSVLLGALSLDVRSSHELLVPVLRVLLPPDYSEDEARGDLALLQLRHPVSLSTR 171
Query: 555 VIPACLPTPNYVVADRTACYITGWGETKGTYGAGL-----LKEARLPVIENKVCNRYEYL 719
+ P CLP P + C++TGWG G L L+ R+P+++++ C+R ++
Sbjct: 172 IQPVCLPAPGSHPPPGSPCWVTGWGSLSP--GVPLPKGRPLQGVRVPLLDSRACDRLYHV 229
Query: 720 DGKVSSKE-------LCAGHLAGGIDSCQGDSGGPLVCFEKDKYILQGVTSWGLGCALPN 878
V E LCAG+ G D+CQGDSGGPL C E ++L GV SWG GCALPN
Sbjct: 230 GANVPQGERIVLPGNLCAGYRRGHKDACQGDSGGPLTCMESGHWVLVGVVSWGKGCALPN 289
Query: 879 KPGVCVRVSRFVTWIE 926
+PGV V+++ WI+
Sbjct: 290 RPGVYTNVAKYSPWIQ 305
Database: RefSeqMP
Posted date: Aug 2, 2006 12:58 AM
Number of letters in database: 21,768,885
Number of sequences in database: 45,328
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 63,410,024
Number of Sequences: 45328
Number of extensions: 1779243
Number of successful extensions: 6396
Number of sequences better than 1.0e-05: 10
Number of HSP's better than 0.0 without gapping: 4782
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5637
length of database: 21,768,885
effective HSP length: 106
effective length of database: 16,964,117
effective search space used: 5038342749
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)