Animal-Genome cDNA LVR01_0062_H12


Search to RefSeqBP

BLASTX 2.2.10 [Oct-19-2004]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= LVR01_0062_H12
         (1212 letters)

Database: RefSeqBP 
           33,508 sequences; 16,112,626 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_776376.1| plasminogen [Bos taurus]                             530   e-151
Alignment   gi|XP_592554.2| PREDICTED: similar to Hepatocyte growth factor-...   248   7e-66
Alignment   gi|NP_001026921.1| hepatocyte growth factor [Bos taurus]             209   5e-54
Alignment   gi|XP_874086.1| PREDICTED: hepatocyte growth factor [Bos taurus]     209   5e-54
Alignment   gi|XP_886646.1| PREDICTED: similar to Serine protease hepsin (T...   196   3e-50
Alignment   gi|XP_584887.2| PREDICTED: similar to Serine protease hepsin (T...   196   4e-50
Alignment   gi|XP_618102.2| PREDICTED: similar to Transmembrane protease, s...   187   2e-47
Alignment   gi|NP_001014868.1| hyaluronan binding protein 2 [Bos taurus]         186   3e-47
Alignment   gi|XP_607560.2| PREDICTED: similar to Transmembrane protease, s...   186   3e-47
Alignment   gi|XP_607216.2| PREDICTED: similar to protease, serine, 33 [Bos...   182   4e-46

>ref|NP_776376.1| plasminogen [Bos taurus]
          Length = 812

 Score =  530 bits (1365), Expect = e-151
 Identities = 249/314 (79%), Positives = 269/314 (85%)
 Frame = +3

Query: 3    VAGVPCQEWAAQEPHRHSIFTPGTNPRAGLEKNYCRNPDGDDNGPWCYTTNPQKLFDYCD 182
            VAGVPCQEWAAQEPH+HSIFTP TNP++GLE+NYCRNPDGD NGPWCYT NP+K FDYCD
Sbjct: 501  VAGVPCQEWAAQEPHQHSIFTPETNPQSGLERNYCRNPDGDVNGPWCYTMNPRKPFDYCD 560

Query: 183  VPQCVTSSFDCGKPKVEPKKCPARVVGGCVSIPHSWPWQISLRYRYRGHFCGGTLISPEW 362
            VPQC  SSFDCGKPKVEPKKC  R+VGGCVS PHSWPWQ+SLR   R HFCGGTLISP+W
Sbjct: 561  VPQC-ESSFDCGKPKVEPKKCSGRIVGGCVSKPHSWPWQVSLRRSSR-HFCGGTLISPKW 618

Query: 363  VLTAKHCLEKSSSPSSYKVILGAHEEHRLGEGVQEIDVSKLFKEPSGADIALLKLSSPAV 542
            VLTA HCL+   + S YKVILGAH E    + VQEI VS+LF+EPS ADIALLKLS PA+
Sbjct: 619  VLTAAHCLDNILALSFYKVILGAHNEKVREQSVQEIPVSRLFREPSQADIALLKLSRPAI 678

Query: 543  ITDKVIPACLPTPNYVVADRTACYITGWGETKGTYGAGLLKEARLPVIENKVCNRYEYLD 722
            IT +VIPACLP PNY+VA RT CYITGWGET+GT+G GLLKEA LPVIENKVCNR EYLD
Sbjct: 679  ITKEVIPACLPPPNYMVAARTECYITGWGETQGTFGEGLLKEAHLPVIENKVCNRNEYLD 738

Query: 723  GKVSSKELCAGHLAGGIDSCQGDSGGPLVCFEKDKYILQGVTSWGLGCALPNKPGVCVRV 902
            G+V   ELCAGHL GG DSCQGDSGGPLVCFEKDKYILQGVTSWGLGCA PNKPGV VRV
Sbjct: 739  GRVKPTELCAGHLIGGTDSCQGDSGGPLVCFEKDKYILQGVTSWGLGCARPNKPGVYVRV 798

Query: 903  SRFVTWIEEIMRRN 944
            S +V WIEE MRRN
Sbjct: 799  SPYVPWIEETMRRN 812



 Score =  101 bits (252), Expect = 1e-21
 Identities = 42/78 (53%), Positives = 52/78 (66%)
 Frame = +3

Query: 6   AGVPCQEWAAQEPHRHSIFTPGTNPRAGLEKNYCRNPDGDDNGPWCYTTNPQKLFDYCDV 185
           +GV CQ+W+A  PH    F+P   P AGLE+NYCRNPD D+NGPWCYTT+P K +DYCD+
Sbjct: 127 SGVTCQKWSATSPHVPK-FSPEKFPLAGLEENYCRNPDNDENGPWCYTTDPDKRYDYCDI 185

Query: 186 PQCVTSSFDCGKPKVEPK 239
           P+C      C     E K
Sbjct: 186 PECEDKCMHCSGENYEGK 203



 Score = 87.8 bits (216), Expect = 2e-17
 Identities = 40/95 (42%), Positives = 57/95 (60%)
 Frame = +3

Query: 3   VAGVPCQEWAAQEPHRHSIFTPGTNPRAGLEKNYCRNPDGDDNGPWCYTTNPQKLFDYCD 182
           ++G  CQ W +Q PH H  + P   P   L+ NYCRNPDG+   PWC+TT+PQK +++CD
Sbjct: 208 MSGRDCQAWDSQSPHAHG-YIPSKFPNKNLKMNYCRNPDGEPR-PWCFTTDPQKRWEFCD 265

Query: 183 VPQCVTSSFDCGKPKVEPKKCPARVVGGCVSIPHS 287
           +P+C T     G PK +  K   +  GG V++  S
Sbjct: 266 IPRCTTPPPSSG-PKYQCLKGTGKNYGGTVAVTES 299



 Score = 77.8 bits (190), Expect = 2e-14
 Identities = 40/108 (37%), Positives = 56/108 (51%)
 Frame = +3

Query: 3   VAGVPCQEWAAQEPHRHSIFTPGTNPRAGLEKNYCRNPDGDDNGPWCYTTNPQKLFDYCD 182
           + G  CQ W++  PHRH + TP   P AGL  NYCRNPD D + PWCYTT+P+  +++C+
Sbjct: 400 ITGRKCQSWSSMTPHRH-LKTPENYPNAGLTMNYCRNPDADKS-PWCYTTDPRVRWEFCN 457

Query: 183 VPQCVTSSFDCGKPKVEPKKCPARVVGGCVSIPHSWPWQISLRYRYRG 326
           + +C  +          P++ PA      V  P      I     YRG
Sbjct: 458 LKKCSET----------PEQVPAAPQAPGVENPPEADCMIGTGKSYRG 495



 Score = 76.6 bits (187), Expect = 4e-14
 Identities = 32/66 (48%), Positives = 44/66 (66%)
 Frame = +3

Query: 6   AGVPCQEWAAQEPHRHSIFTPGTNPRAGLEKNYCRNPDGDDNGPWCYTTNPQKLFDYCDV 185
           +G  CQ W+ Q PH+H+  TP   P   LE+NYCRNP+G+   PWCYTTN +  ++YC +
Sbjct: 299 SGHTCQRWSEQTPHKHNR-TPENFPCKNLEENYCRNPNGE-KAPWCYTTNSEVRWEYCTI 356

Query: 186 PQCVTS 203
           P C +S
Sbjct: 357 PSCESS 362


>ref|XP_592554.2| PREDICTED: similar to Hepatocyte growth factor-like protein precursor
            (Macrophage stimulatory protein) (MSP) (Macrophage
            stimulating protein) [Bos taurus]
          Length = 711

 Score =  248 bits (633), Expect = 7e-66
 Identities = 138/328 (42%), Positives = 184/328 (56%), Gaps = 18/328 (5%)
 Frame = +3

Query: 9    GVPCQEWAAQEPHRHSIFTPGTNPRAGLEKNYCRNPDGDDNGPWCYTTNPQKLFDYCDVP 188
            G+ CQ W+A+ PH+   F   + P   LE+N+CRNPDGD +GPWCYTT+P   FDYC + 
Sbjct: 388  GIRCQNWSAETPHKPQ-FKHTSAPHTPLEENFCRNPDGDSHGPWCYTTDPGTPFDYCALR 446

Query: 189  QCVTSS------------FD-CGK--PKVEPKKCPARVVGGCVSIPHSWPWQISLRYRYR 323
            +C                FD CGK   +V+P     RVVGG    P + PW +SLR R  
Sbjct: 447  RCDDDQQPSILETAHQVLFDKCGKRVTRVDPLHSKLRVVGGQ---PGNSPWTVSLRNRQG 503

Query: 324  GHFCGGTLISPEWVLTAKHCLEKSS-SPSSYKVILGA-HEEHRLGE-GVQEIDVSKLFKE 494
             HFCGG+L+  +WVLTA+ C      S   Y+V LG   ++ + GE  +Q I ++K+   
Sbjct: 504  QHFCGGSLVKEQWVLTARQCFSSCHMSLVGYEVWLGTLFQDPQPGEPDLQHIPMAKMVCG 563

Query: 495  PSGADIALLKLSSPAVITDKVIPACLPTPNYVVADRTACYITGWGETKGTYGAGLLKEAR 674
            PSG+ + LLKL  P ++  +V   CLP   YVV   T C I GWGETKGT    +L  A 
Sbjct: 564  PSGSQLVLLKLERPVILNQRVALICLPPERYVVPPGTRCEIAGWGETKGTGDDTVLNIAL 623

Query: 675  LPVIENKVCNRYEYLDGKVSSKELCAGHLAGGIDSCQGDSGGPLVCFEKDKYILQGVTSW 854
            L VI N+ CN      G+V   E+C   L   + +C+GD GGPL CF  D ++LQG+   
Sbjct: 624  LSVISNQECNVKH--RGRVRESEMCTAGLLAPVGACEGDYGGPLACFTHDCWVLQGIIIP 681

Query: 855  GLGCALPNKPGVCVRVSRFVTWIEEIMR 938
               CA P  P + +RVS FV WI ++MR
Sbjct: 682  NRVCARPRWPAIFMRVSVFVDWIHKVMR 709



 Score = 75.5 bits (184), Expect = 8e-14
 Identities = 33/64 (51%), Positives = 41/64 (64%)
 Frame = +3

Query: 3   VAGVPCQEWAAQEPHRHSIFTPGTNPRAGLEKNYCRNPDGDDNGPWCYTTNPQKLFDYCD 182
           V G+PCQ W+ + P+ H  FTP    R GLE+N+CRNPD D  GPWCYTT+P   F  C 
Sbjct: 126 VGGLPCQRWSHRFPNDHK-FTPTL--RNGLEENFCRNPDRDPGGPWCYTTDPAVRFQSCG 182

Query: 183 VPQC 194
           +  C
Sbjct: 183 IKSC 186



 Score = 74.3 bits (181), Expect = 2e-13
 Identities = 32/63 (50%), Positives = 40/63 (63%)
 Frame = +3

Query: 6   AGVPCQEWAAQEPHRHSIFTPGTNPRAGLEKNYCRNPDGDDNGPWCYTTNPQKLFDYCDV 185
           +G  CQ W  Q PH H  F PG      L+ NYCRNPDG +  PWCYTT+PQ   ++CD+
Sbjct: 208 SGRECQRWDLQHPHPHP-FEPGKFLDKNLDDNYCRNPDGSER-PWCYTTDPQMEREFCDL 265

Query: 186 PQC 194
           P+C
Sbjct: 266 PRC 268



 Score = 63.9 bits (154), Expect = 2e-10
 Identities = 28/58 (48%), Positives = 35/58 (60%)
 Frame = +3

Query: 6   AGVPCQEWAAQEPHRHSIFTPGTNPRAGLEKNYCRNPDGDDNGPWCYTTNPQKLFDYC 179
           AGVPCQ W AQ PH+H  F P       L +N+CRNPDG +  PWC+T+ P     +C
Sbjct: 300 AGVPCQRWDAQLPHQHR-FAPEKYACKDLRENFCRNPDGSE-APWCFTSRPGMRMAFC 355


>ref|NP_001026921.1| hepatocyte growth factor [Bos taurus]
          Length = 730

 Score =  209 bits (531), Expect = 5e-54
 Identities = 117/326 (35%), Positives = 173/326 (53%), Gaps = 16/326 (4%)
 Frame = +3

Query: 6    AGVPCQEWAA--QEPHRHSIFTPGTNPRAGLEKNYCRNPDGDDNGPWCYTTNPQKLFDYC 179
            +G+ C  W    ++ HRH  + P       L KNYCRNPD D +GPWCYT NP   +DYC
Sbjct: 408  SGLTCSMWDKNMEDLHRHIFWEPDATK---LNKNYCRNPDDDAHGPWCYTGNPLIPWDYC 464

Query: 180  DVPQCVTSS-----------FDCGKPKVEPKKCPARVVGGCVSIPHSWPWQISLRYRYRG 326
             + +C   +             C K K        RVV G +    +  W +SL+YR + 
Sbjct: 465  PISRCEGDTTPTIVNLDHPVISCAKTK------QLRVVNG-IPTRTNVGWMVSLKYRNK- 516

Query: 327  HFCGGTLISPEWVLTAKHCL-EKSSSPSSYKVILGAHEEHRLGEGV--QEIDVSKLFKEP 497
            H CGG+LI   W+LTA+ C   ++     Y+  LG H+ H  G+    Q ++V++L   P
Sbjct: 517  HICGGSLIKESWILTARQCFPSRNKDLKDYEAWLGIHDVHGRGDEKRKQVLNVTQLVYGP 576

Query: 498  SGADIALLKLSSPAVITDKVIPACLPTPNYVVADRTACYITGWGETKGTYGAGLLKEARL 677
             G+D+ LLKL+ PA++ D V    LP     + ++T C + GWG T      GLL+ A L
Sbjct: 577  EGSDLVLLKLARPAILDDFVSTIDLPNYGCTIPEKTTCSVYGWGYTGLINSDGLLRVAHL 636

Query: 678  PVIENKVCNRYEYLDGKVSSKELCAGHLAGGIDSCQGDSGGPLVCFEKDKYILQGVTSWG 857
             ++ N+ C++Y      ++  E+CAG        C+GD GGPLVC +    ++ GV   G
Sbjct: 637  YIMGNEKCSQYHQGKVTLNESEICAGAENIVSGPCEGDYGGPLVCEQHKMRMVLGVIVPG 696

Query: 858  LGCALPNKPGVCVRVSRFVTWIEEIM 935
             GCA+PN+PG+ VRV+ +  WI +I+
Sbjct: 697  RGCAIPNRPGIFVRVAYYAKWIHKII 722



 Score = 82.0 bits (201), Expect = 8e-16
 Identities = 32/70 (45%), Positives = 47/70 (67%)
 Frame = +3

Query: 6   AGVPCQEWAAQEPHRHSIFTPGTNPRAGLEKNYCRNPDGDDNGPWCYTTNPQKLFDYCDV 185
           +G+ CQ W +  PH HS F P +     L++NYCRNP G++ GPWC+T+NP+  ++ CD+
Sbjct: 145 SGIKCQPWNSMIPHEHS-FLPSSYRGKDLQENYCRNPRGEEGGPWCFTSNPEVRYEVCDI 203

Query: 186 PQCVTSSFDC 215
           PQC  S  +C
Sbjct: 204 PQC--SEVEC 211



 Score = 73.9 bits (180), Expect = 2e-13
 Identities = 35/71 (49%), Positives = 46/71 (64%), Gaps = 2/71 (2%)
 Frame = +3

Query: 9   GVPCQEWAAQEPHRHSIFTPGTNPRAGLEKNYCRNPDGDDNGPWCYTTNPQKLFDYC-DV 185
           G+PCQ W +Q PH+H I TP       L +NYCRNPDG ++ PWC+TT+P     YC  +
Sbjct: 323 GIPCQRWDSQYPHQHDI-TPENFKCKDLRENYCRNPDGAES-PWCFTTDPNIRVGYCSQI 380

Query: 186 PQC-VTSSFDC 215
           P+C V+S  DC
Sbjct: 381 PKCDVSSGQDC 391



 Score = 71.2 bits (173), Expect = 1e-12
 Identities = 32/79 (40%), Positives = 42/79 (53%)
 Frame = +3

Query: 9   GVPCQEWAAQEPHRHSIFTPGTNPRAGLEKNYCRNPDGDDNGPWCYTTNPQKLFDYCDVP 188
           G  CQ W  Q PHRH  F P   P  G + NYCRNPDG    PWCYT +P   ++YC + 
Sbjct: 229 GKICQRWDHQTPHRHK-FLPERYPDKGFDDNYCRNPDGKPR-PWCYTLDPDTPWEYCAIK 286

Query: 189 QCVTSSFDCGKPKVEPKKC 245
            C  S+ +     ++  +C
Sbjct: 287 MCAHSTMNDTDLPMQTTEC 305


>ref|XP_874086.1| PREDICTED: hepatocyte growth factor [Bos taurus]
          Length = 697

 Score =  209 bits (531), Expect = 5e-54
 Identities = 117/326 (35%), Positives = 173/326 (53%), Gaps = 16/326 (4%)
 Frame = +3

Query: 6    AGVPCQEWAA--QEPHRHSIFTPGTNPRAGLEKNYCRNPDGDDNGPWCYTTNPQKLFDYC 179
            +G+ C  W    ++ HRH  + P       L KNYCRNPD D +GPWCYT NP   +DYC
Sbjct: 375  SGLTCSMWDKNMEDLHRHIFWEPDATK---LNKNYCRNPDDDAHGPWCYTGNPLIPWDYC 431

Query: 180  DVPQCVTSS-----------FDCGKPKVEPKKCPARVVGGCVSIPHSWPWQISLRYRYRG 326
             + +C   +             C K K        RVV G +    +  W +SL+YR + 
Sbjct: 432  PISRCEGDTTPTIVNLDHPVISCAKTK------QLRVVNG-IPTRTNVGWMVSLKYRNK- 483

Query: 327  HFCGGTLISPEWVLTAKHCL-EKSSSPSSYKVILGAHEEHRLGEGV--QEIDVSKLFKEP 497
            H CGG+LI   W+LTA+ C   ++     Y+  LG H+ H  G+    Q ++V++L   P
Sbjct: 484  HICGGSLIKESWILTARQCFPSRNKDLKDYEAWLGIHDVHGRGDEKRKQVLNVTQLVYGP 543

Query: 498  SGADIALLKLSSPAVITDKVIPACLPTPNYVVADRTACYITGWGETKGTYGAGLLKEARL 677
             G+D+ LLKL+ PA++ D V    LP     + ++T C + GWG T      GLL+ A L
Sbjct: 544  EGSDLVLLKLARPAILDDFVSTIDLPNYGCTIPEKTTCSVYGWGYTGLINSDGLLRVAHL 603

Query: 678  PVIENKVCNRYEYLDGKVSSKELCAGHLAGGIDSCQGDSGGPLVCFEKDKYILQGVTSWG 857
             ++ N+ C++Y      ++  E+CAG        C+GD GGPLVC +    ++ GV   G
Sbjct: 604  YIMGNEKCSQYHQGKVTLNESEICAGAENIVSGPCEGDYGGPLVCEQHKMRMVLGVIVPG 663

Query: 858  LGCALPNKPGVCVRVSRFVTWIEEIM 935
             GCA+PN+PG+ VRV+ +  WI +I+
Sbjct: 664  RGCAIPNRPGIFVRVAYYAKWIHKII 689



 Score = 82.0 bits (201), Expect = 8e-16
 Identities = 32/70 (45%), Positives = 47/70 (67%)
 Frame = +3

Query: 6   AGVPCQEWAAQEPHRHSIFTPGTNPRAGLEKNYCRNPDGDDNGPWCYTTNPQKLFDYCDV 185
           +G+ CQ W +  PH HS F P +     L++NYCRNP G++ GPWC+T+NP+  ++ CD+
Sbjct: 112 SGIKCQPWNSMIPHEHS-FLPSSYRGKDLQENYCRNPRGEEGGPWCFTSNPEVRYEVCDI 170

Query: 186 PQCVTSSFDC 215
           PQC  S  +C
Sbjct: 171 PQC--SEVEC 178



 Score = 73.9 bits (180), Expect = 2e-13
 Identities = 35/71 (49%), Positives = 46/71 (64%), Gaps = 2/71 (2%)
 Frame = +3

Query: 9   GVPCQEWAAQEPHRHSIFTPGTNPRAGLEKNYCRNPDGDDNGPWCYTTNPQKLFDYC-DV 185
           G+PCQ W +Q PH+H I TP       L +NYCRNPDG ++ PWC+TT+P     YC  +
Sbjct: 290 GIPCQRWDSQYPHQHDI-TPENFKCKDLRENYCRNPDGAES-PWCFTTDPNIRVGYCSQI 347

Query: 186 PQC-VTSSFDC 215
           P+C V+S  DC
Sbjct: 348 PKCDVSSGQDC 358



 Score = 71.2 bits (173), Expect = 1e-12
 Identities = 32/79 (40%), Positives = 42/79 (53%)
 Frame = +3

Query: 9   GVPCQEWAAQEPHRHSIFTPGTNPRAGLEKNYCRNPDGDDNGPWCYTTNPQKLFDYCDVP 188
           G  CQ W  Q PHRH  F P   P  G + NYCRNPDG    PWCYT +P   ++YC + 
Sbjct: 196 GKICQRWDHQTPHRHK-FLPERYPDKGFDDNYCRNPDGKPR-PWCYTLDPDTPWEYCAIK 253

Query: 189 QCVTSSFDCGKPKVEPKKC 245
            C  S+ +     ++  +C
Sbjct: 254 MCAHSTMNDTDLPMQTTEC 272


>ref|XP_886646.1| PREDICTED: similar to Serine protease hepsin (Transmembrane protease,
            serine 1) isoform 3 [Bos taurus]
          Length = 434

 Score =  196 bits (498), Expect = 3e-50
 Identities = 131/359 (36%), Positives = 186/359 (51%), Gaps = 29/359 (8%)
 Frame = +3

Query: 3    VAGVPCQEWA---AQEPHRHSIFTPGTNPRAGLEKNYCRNPDGDDNGPWCYTTNPQKLFD 173
            VAG+ C+E     A +     + T G N  +G    +C      D G   +     ++  
Sbjct: 85   VAGLSCEEMGFLRALDFSELDVRTAGANGTSGF---FCV-----DEGRLPHARRLLEVLS 136

Query: 174  YCDVPQ---CVTSSFDCGKPKVEPKKCPARVVGGCVSIPHSWPWQISLRYRYRGHFCGGT 344
             CD P+     TS  DCG  K+       R+VGG  +    WPWQ+SLRY    H CGG+
Sbjct: 137  VCDCPRGRFLATSCQDCGHRKLPVD----RIVGGQDTSLGRWPWQVSLRYD-GAHLCGGS 191

Query: 345  LISPEWVLTAKHCL-EKSSSPSSYKVILGAHEE---HRLGEGVQEIDVSK---LFKEPSG 503
            ++S +WVLTA HC  E++   S ++V  GA  +   H +  GVQ +        F++P+ 
Sbjct: 192  VLSRDWVLTAAHCFPERNRVLSRWRVFAGAVAQTSPHGVQLGVQAVIYHGGYLPFRDPNS 251

Query: 504  A----DIALLKLSSPAVITDKVIPACLPTPNYVVADRTACYITGWGETKGTYG--AGLLK 665
                 DIAL+ LS    +T+ + P CLP     + D   C +TGWG T+  YG  AG+L+
Sbjct: 252  EENSNDIALVHLSGTLPLTEYIQPVCLPAAGQALVDGKICTVTGWGNTQ-YYGQQAGVLQ 310

Query: 666  EARLPVIENKVCNRYEYLDGKVSSKELCAGHLAGGIDSCQGDSGGPLVCFEK----DKYI 833
            EAR+P+I N VCN  ++   ++  K  CAG+  GGID+CQGDSGGP VC +      ++ 
Sbjct: 311  EARVPIISNDVCNGPDFYGNQIKPKMFCAGYPEGGIDACQGDSGGPFVCEDSISRTPRWR 370

Query: 834  LQGVTSWGLGCALPNKPGVCVRVSRFVTWIEEIM------RRN*SDGKQREVSRDLEAG 992
            L G+ SWG GCAL  KPGV  +VS F  WI + +      R     G+  +  R+ EAG
Sbjct: 371  LCGIVSWGTGCALAQKPGVYTKVSDFREWIFQAIKVKFEPRWEPEGGRVWDSEREREAG 429


>ref|XP_584887.2| PREDICTED: similar to Serine protease hepsin (Transmembrane protease,
            serine 1) isoform 2 [Bos taurus]
          Length = 417

 Score =  196 bits (497), Expect = 4e-50
 Identities = 125/335 (37%), Positives = 178/335 (53%), Gaps = 23/335 (6%)
 Frame = +3

Query: 3    VAGVPCQEWA---AQEPHRHSIFTPGTNPRAGLEKNYCRNPDGDDNGPWCYTTNPQKLFD 173
            VAG+ C+E     A +     + T G N  +G    +C      D G   +     ++  
Sbjct: 85   VAGLSCEEMGFLRALDFSELDVRTAGANGTSGF---FCV-----DEGRLPHARRLLEVLS 136

Query: 174  YCDVPQ---CVTSSFDCGKPKVEPKKCPARVVGGCVSIPHSWPWQISLRYRYRGHFCGGT 344
             CD P+     TS  DCG  K+       R+VGG  +    WPWQ+SLRY    H CGG+
Sbjct: 137  VCDCPRGRFLATSCQDCGHRKLPVD----RIVGGQDTSLGRWPWQVSLRYD-GAHLCGGS 191

Query: 345  LISPEWVLTAKHCL-EKSSSPSSYKVILGAHEE---HRLGEGVQEIDVSK---LFKEPSG 503
            ++S +WVLTA HC  E++   S ++V  GA  +   H +  GVQ +        F++P+ 
Sbjct: 192  VLSRDWVLTAAHCFPERNRVLSRWRVFAGAVAQTSPHGVQLGVQAVIYHGGYLPFRDPNS 251

Query: 504  A----DIALLKLSSPAVITDKVIPACLPTPNYVVADRTACYITGWGETKGTYG--AGLLK 665
                 DIAL+ LS    +T+ + P CLP     + D   C +TGWG T+  YG  AG+L+
Sbjct: 252  EENSNDIALVHLSGTLPLTEYIQPVCLPAAGQALVDGKICTVTGWGNTQ-YYGQQAGVLQ 310

Query: 666  EARLPVIENKVCNRYEYLDGKVSSKELCAGHLAGGIDSCQGDSGGPLVCFEK----DKYI 833
            EAR+P+I N VCN  ++   ++  K  CAG+  GGID+CQGDSGGP VC +      ++ 
Sbjct: 311  EARVPIISNDVCNGPDFYGNQIKPKMFCAGYPEGGIDACQGDSGGPFVCEDSISRTPRWR 370

Query: 834  LQGVTSWGLGCALPNKPGVCVRVSRFVTWIEEIMR 938
            L G+ SWG GCAL  KPGV  +VS F  WI + ++
Sbjct: 371  LCGIVSWGTGCALAQKPGVYTKVSDFREWIFQAIK 405


>ref|XP_618102.2| PREDICTED: similar to Transmembrane protease, serine 3 [Bos taurus]
          Length = 787

 Score =  187 bits (474), Expect = 2e-47
 Identities = 101/235 (42%), Positives = 137/235 (58%), Gaps = 7/235 (2%)
 Frame = +3

Query: 252 RVVGGCVSIPHSWPWQISLRYRYRGHFCGGTLISPEWVLTAKHCLEKSSSPSSYKV---- 419
           R+VGG  S    WPWQ SL+++   H CGG++I+P WV+TA HC+     P S+ +    
Sbjct: 250 RIVGGNTSSLAQWPWQASLQFQGY-HLCGGSVITPLWVVTAAHCVYDLYLPKSWTIQVGL 308

Query: 420 --ILGAHEEHRLGEGVQEIDVSKLFKEPSGADIALLKLSSPAVITDKVIPACLPTPNYVV 593
             +L +     L E +  I  SK   +  G DIAL+KL+ P    +   P CLP      
Sbjct: 309 VSLLDSPAPSHLVEKI--IYHSKYKPKRLGNDIALMKLAGPVTFNEMTQPVCLPNSEENF 366

Query: 594 ADRTACYITGWGETK-GTYGAGLLKEARLPVIENKVCNRYEYLDGKVSSKELCAGHLAGG 770
            D   C+ +GWG T+ G   + +L  A +P+I NKVCN  +   G +S   LCAG+L GG
Sbjct: 367 PDGKLCWTSGWGATEDGGDASPVLNHAAVPLISNKVCNHRDVYGGIISPSMLCAGYLKGG 426

Query: 771 IDSCQGDSGGPLVCFEKDKYILQGVTSWGLGCALPNKPGVCVRVSRFVTWIEEIM 935
           +DSCQGDSGGPLVC E+  + L G TS+G+GCA  NKPGV  R++ F+ WI E M
Sbjct: 427 VDSCQGDSGGPLVCQERRVWKLVGATSFGIGCAEVNKPGVYTRITSFLDWIHEQM 481


>ref|NP_001014868.1| hyaluronan binding protein 2 [Bos taurus]
          Length = 558

 Score =  186 bits (472), Expect = 3e-47
 Identities = 120/325 (36%), Positives = 164/325 (50%), Gaps = 42/325 (12%)
 Frame = +3

Query: 93   EKNYCRNPDGDDNGPWCY--TTNPQKLFDYCDVPQCVTSSFD------------------ 212
            E N+CRNPDGD   PWC+    N +  ++YCDVP C  S+ D                  
Sbjct: 240  EHNFCRNPDGDKK-PWCFIKVNNVKVKWEYCDVPAC--SALDVANPEGRPTEPLTKFPEF 296

Query: 213  --CGKPKVEPKKCPARVVGGCVSIPHSWPWQISLRYRYR-------GHFCGGTLISPEWV 365
              CG+ ++  KK   R+ GG  S     PWQ SL+   R       GH+CGG LI P WV
Sbjct: 297  GSCGRTEIAEKKVK-RIFGGFKSTAGKHPWQASLQTSLRLTVSTPQGHYCGGALIHPCWV 355

Query: 366  LTAKHCLEKSSSPSSYKVILGAHEEHRLGEGVQEIDVSKLFK--------EPSGADIALL 521
            LTA HC E  +     KV+LG  +  +     Q   V K+FK        +    DIALL
Sbjct: 356  LTAAHCTEIKTK--YLKVVLGDQDLTKTEFHEQSFGVQKIFKYSHYIEIDDIPYNDIALL 413

Query: 522  KLSSP----AVITDKVIPACLPTPNYVVADRTACYITGWGETKGTYGAGLLKEARLPVIE 689
            KL       A+ +  V   CLP   ++    T CYI+GWG T+   G+  L +A++ +I 
Sbjct: 414  KLKPVDGHCALESKYVKTVCLPDGPFLSG--TECYISGWGVTETGEGSRHLLDAKVKLIS 471

Query: 690  NKVCNRYEYLDGKVSSKELCAGHL-AGGIDSCQGDSGGPLVCFEKDKYILQGVTSWGLGC 866
            N +CN  +  D  +    +CAG+L   G DSCQGDSGGPL C +     + G+ SWGL C
Sbjct: 472  NTICNSRQLYDHSIDDNMICAGNLQKPGQDSCQGDSGGPLTCEKDGTSYIYGIVSWGLEC 531

Query: 867  ALPNKPGVCVRVSRFVTWIEEIMRR 941
                +PGV  +V++F+TWI+  M +
Sbjct: 532  G--KRPGVYTQVTKFLTWIKATMEK 554


>ref|XP_607560.2| PREDICTED: similar to Transmembrane protease, serine 13 (Mosaic
            serine protease) (Membrane-type mosaic serine protease)
            [Bos taurus]
          Length = 683

 Score =  186 bits (472), Expect = 3e-47
 Identities = 96/231 (41%), Positives = 134/231 (58%), Gaps = 7/231 (3%)
 Frame = +3

Query: 252  RVVGGCVSIPHSWPWQISLRYRYRGHFCGGTLISPEWVLTAKHC--LEKSSSPSSYKVIL 425
            R+VGG  +    WPWQ+SL++  R H CGGTLI  +W+LTA HC  + +      +KV +
Sbjct: 396  RIVGGARAPESKWPWQVSLQFS-RTHICGGTLIDAQWILTAAHCFFITREKILEGWKVYV 454

Query: 426  GAHEEHRLGEGVQEIDV---SKLFKEPSGADIALLKLSSPAVITDKVIPACLPTPNYVVA 596
            G ++ H L E      +   S    +    DIAL++LS P  ++  V PACLP       
Sbjct: 455  GTNDLHHLPESASVAQIIINSNYSDDQDDYDIALMRLSKPLTLSAHVHPACLPMHGQTFG 514

Query: 597  DRTACYITGWGETKGT--YGAGLLKEARLPVIENKVCNRYEYLDGKVSSKELCAGHLAGG 770
                C+ITG+G+TK T    +  L+E ++ +I+ K CN Y   D  ++ + +CAG L GG
Sbjct: 515  LNEICWITGFGKTKETDERTSPFLREVQVNLIDFKKCNDYLVYDSYLTPRMMCAGDLRGG 574

Query: 771  IDSCQGDSGGPLVCFEKDKYILQGVTSWGLGCALPNKPGVCVRVSRFVTWI 923
             DSCQGDSGGPLVC +  ++ L GVTSWG GC   NKPGV  +V+  + WI
Sbjct: 575  RDSCQGDSGGPLVCEQNGRWYLAGVTSWGTGCGQRNKPGVYTKVTEVLPWI 625


>ref|XP_607216.2| PREDICTED: similar to protease, serine, 33 [Bos taurus]
          Length = 369

 Score =  182 bits (463), Expect = 4e-46
 Identities = 107/277 (38%), Positives = 149/277 (53%), Gaps = 18/277 (6%)
 Frame = +3

Query: 150 TNPQKLFDYCDVPQCVTSSFDCGKPKVEPKKCPARVVGGCVSIPHSWPWQISLRYRYRGH 329
           T PQ     C  P   +S   CG+P+V      +R+VGG  +    WPWQ S+++R   H
Sbjct: 15  TAPQACLAGCYGPSS-SSGPTCGQPRVS-----SRIVGGRDARAGEWPWQASIQHR-GAH 67

Query: 330 FCGGTLISPEWVLTAKHCLEKSSSPSSYKVILGAHEEHRLGEGVQEIDVSKLFKEPS--- 500
            CGG+LI+P+WVLTA HC  + + P+ Y+V LGA              V ++   P    
Sbjct: 68  VCGGSLIAPQWVLTAAHCFPRKALPADYRVRLGAPHLGPSSPPALLAPVRRVLLPPDYSE 127

Query: 501 -GA--DIALLKLSSPAVITDKVIPACLPTPNYVVADRTACYITGWGETKGTYGAGL---- 659
            GA  D+ALL L  P  ++ +V P CLP P       T C++TGWG  +   G  L    
Sbjct: 128 DGAHGDLALLLLRRPTPLSTRVQPVCLPEPGARPPPGTPCWVTGWGSLRP--GVPLPEWR 185

Query: 660 -LKEARLPVIENKVCNRYEYLDGKVSSKE-------LCAGHLAGGIDSCQGDSGGPLVCF 815
            L+  R+P+++   C+   +L   V   E       LCAG++ G  D+CQGDSGGPLVC 
Sbjct: 186 PLQGVRVPLLDAHTCDHLYHLGTDVPRAEHIVLPGSLCAGYVGGQKDACQGDSGGPLVCM 245

Query: 816 EKDKYILQGVTSWGLGCALPNKPGVCVRVSRFVTWIE 926
           +  ++IL GV SWG GCALPN+PGV   V+ +  WI+
Sbjct: 246 KSGRWILVGVVSWGKGCALPNRPGVYTNVATYSPWIQ 282


  Database: RefSeqBP
    Posted date:  Aug 1, 2006  7:14 PM
  Number of letters in database: 16,112,626
  Number of sequences in database:  33,508
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 47,088,963
Number of Sequences: 33508
Number of extensions: 1326064
Number of successful extensions: 4588
Number of sequences better than 1.0e-05: 10
Number of HSP's better than  0.0 without gapping: 3534
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4109
length of database: 16,112,626
effective HSP length: 104
effective length of database: 12,627,794
effective search space used: 3775710406
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

Search to RefSeqCP

BLASTX 2.2.10 [Oct-19-2004]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= LVR01_0062_H12
         (1212 letters)

Database: RefSeqCP 
           33,732 sequences; 19,266,565 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|XP_533468.2| PREDICTED: similar to Plasminogen precursor [Ca...   575   e-164
Alignment   gi|XP_541884.2| PREDICTED: similar to macrophage stimulating 1 ...   248   8e-66
Alignment   gi|NP_001002964.1| hepatocyte growth factor [Canis familiaris]       209   3e-54
Alignment   gi|XP_541697.2| PREDICTED: similar to Serine protease hepsin (T...   202   7e-52
Alignment   gi|XP_539955.2| PREDICTED: similar to Tissue-type plasminogen a...   189   6e-48
Alignment   gi|XP_853682.1| PREDICTED: similar to Transmembrane protease, s...   188   8e-48
Alignment   gi|XP_861679.1| PREDICTED: similar to Chymotrypsinogen B precur...   183   3e-46
Alignment   gi|XP_852957.1| PREDICTED: similar to Chymotrypsinogen B precur...   182   4e-46
Alignment   gi|XP_536781.2| PREDICTED: similar to Chymotrypsinogen B precur...   181   2e-45
Alignment   gi|XP_535016.2| PREDICTED: similar to hyaluronan binding protei...   179   6e-45

>ref|XP_533468.2| PREDICTED: similar to Plasminogen precursor [Canis familiaris]
          Length = 812

 Score =  575 bits (1482), Expect = e-164
 Identities = 267/314 (85%), Positives = 284/314 (90%)
 Frame = +3

Query: 3    VAGVPCQEWAAQEPHRHSIFTPGTNPRAGLEKNYCRNPDGDDNGPWCYTTNPQKLFDYCD 182
            V G+PCQEWAAQEPHRHSIFTP TNP+AGLEKNYCRNPDGD NGPWCYT N +KLFDYCD
Sbjct: 499  VMGIPCQEWAAQEPHRHSIFTPETNPQAGLEKNYCRNPDGDVNGPWCYTMNQRKLFDYCD 558

Query: 183  VPQCVTSSFDCGKPKVEPKKCPARVVGGCVSIPHSWPWQISLRYRYRGHFCGGTLISPEW 362
            VPQCV++SFDCGKP+VEPKKCP RVVGGCV+ PHSWPWQISLR RY  HFCGGTLISPEW
Sbjct: 559  VPQCVSTSFDCGKPQVEPKKCPGRVVGGCVANPHSWPWQISLRTRYGKHFCGGTLISPEW 618

Query: 363  VLTAKHCLEKSSSPSSYKVILGAHEEHRLGEGVQEIDVSKLFKEPSGADIALLKLSSPAV 542
            VLTA HCLE+SS P+SYKVILGAH+E  L   VQEI+V KLF EP+ ADIALLKLSSPAV
Sbjct: 619  VLTAAHCLERSSRPASYKVILGAHKEVNLESDVQEIEVYKLFLEPTRADIALLKLSSPAV 678

Query: 543  ITDKVIPACLPTPNYVVADRTACYITGWGETKGTYGAGLLKEARLPVIENKVCNRYEYLD 722
            IT KVIPACLP PNYVVADRT CYITGWGET+GTYGAGLLKEA+LPVIENKVCNRYEYL+
Sbjct: 679  ITSKVIPACLPPPNYVVADRTLCYITGWGETQGTYGAGLLKEAQLPVIENKVCNRYEYLN 738

Query: 723  GKVSSKELCAGHLAGGIDSCQGDSGGPLVCFEKDKYILQGVTSWGLGCALPNKPGVCVRV 902
            G+V S ELCAG+LAGG DSCQGDSGGPLVCFEKDKYILQGVTSWGLGCA PNKPGV VRV
Sbjct: 739  GRVKSTELCAGNLAGGTDSCQGDSGGPLVCFEKDKYILQGVTSWGLGCARPNKPGVYVRV 798

Query: 903  SRFVTWIEEIMRRN 944
            SRFVTWIE IMR N
Sbjct: 799  SRFVTWIEGIMRNN 812



 Score = 97.8 bits (242), Expect = 2e-20
 Identities = 39/76 (51%), Positives = 50/76 (65%)
 Frame = +3

Query: 12  VPCQEWAAQEPHRHSIFTPGTNPRAGLEKNYCRNPDGDDNGPWCYTTNPQKLFDYCDVPQ 191
           V CQ+W+   PH+ + +TP  +P  GLE+NYCRNPD D+NGPWCYTTNP   FDYC++P+
Sbjct: 122 VACQKWSDNSPHKPN-YTPEKHPLEGLEENYCRNPDNDENGPWCYTTNPDVRFDYCNIPE 180

Query: 192 CVTSSFDCGKPKVEPK 239
           C      C     E K
Sbjct: 181 CEEECMHCSGENYEGK 196



 Score = 78.6 bits (192), Expect = 1e-14
 Identities = 35/86 (40%), Positives = 52/86 (60%), Gaps = 4/86 (4%)
 Frame = +3

Query: 3   VAGVPCQEWAAQEPHRHSIFTPGTNPRAGLEKNYCRNPDGDDNGPWCYTTNPQKLFDYCD 182
           V+G  CQ W+ Q PH+H+  TP   P   L++NYCRNPDG+   PWCYTTN +  +++C 
Sbjct: 291 VSGHTCQHWSEQTPHKHNR-TPENFPCKNLDENYCRNPDGE-TAPWCYTTNSEVRWEHCQ 348

Query: 183 VPQC----VTSSFDCGKPKVEPKKCP 248
           +P C    +T+ +      V P++ P
Sbjct: 349 IPSCESSPITTEYLDAPASVPPEQTP 374



 Score = 77.8 bits (190), Expect = 2e-14
 Identities = 30/65 (46%), Positives = 43/65 (66%)
 Frame = +3

Query: 6   AGVPCQEWAAQEPHRHSIFTPGTNPRAGLEKNYCRNPDGDDNGPWCYTTNPQKLFDYCDV 185
           +G+ CQ W +Q PH H  + P   P   L+ NYCRNPDG+   PWC+T +P K +++CD+
Sbjct: 202 SGLECQAWNSQTPHAHG-YIPSKFPSKNLKMNYCRNPDGEPR-PWCFTMDPNKRWEFCDI 259

Query: 186 PQCVT 200
           P+C T
Sbjct: 260 PRCTT 264



 Score = 74.7 bits (182), Expect = 2e-13
 Identities = 31/65 (47%), Positives = 43/65 (66%)
 Frame = +3

Query: 3   VAGVPCQEWAAQEPHRHSIFTPGTNPRAGLEKNYCRNPDGDDNGPWCYTTNPQKLFDYCD 182
           + G  CQ W++  PHRH   TP   P AGL  NYCRNPD D + PWCYTT+P   +++C+
Sbjct: 395 ITGRKCQSWSSMTPHRHEK-TPEHFPEAGLTMNYCRNPDADKS-PWCYTTDPSVRWEFCN 452

Query: 183 VPQCV 197
           + +C+
Sbjct: 453 LRKCL 457


>ref|XP_541884.2| PREDICTED: similar to macrophage stimulating 1 (hepatocyte growth
            factor-like) [Canis familiaris]
          Length = 712

 Score =  248 bits (633), Expect = 8e-66
 Identities = 137/328 (41%), Positives = 185/328 (56%), Gaps = 18/328 (5%)
 Frame = +3

Query: 9    GVPCQEWAAQEPHRHSIFTPGTNPRAGLEKNYCRNPDGDDNGPWCYTTNPQKLFDYC--- 179
            GVPCQ W+A+ PH+   FT  + P A LE+N+CRNPD D +GPWCYTT+P   FDYC   
Sbjct: 389  GVPCQHWSAEMPHKPQ-FTAISAPDAHLEENFCRNPDRDSHGPWCYTTDPGTPFDYCALR 447

Query: 180  ----DVPQCVTSSFD------CGK--PKVEPKKCPARVVGGCVSIPHSWPWQISLRYRYR 323
                D P  +    D      CGK   +++ ++   RVVGG    P + PW +SLR R  
Sbjct: 448  RCDDDQPPSILEPPDQVVFEKCGKRVTRLDQQRSKLRVVGGQ---PGNSPWTVSLRNRQG 504

Query: 324  GHFCGGTLISPEWVLTAKHCLEKSSSP-SSYKVILGA-HEEHRLGE-GVQEIDVSKLFKE 494
             HFCGG+L+  +WVLTA+ C      P   Y+V LG   +  + GE G+Q+I V+K+   
Sbjct: 505  QHFCGGSLVKEQWVLTARQCFSSCHVPLMGYEVWLGTLFQNPQPGEPGLQQIPVAKMVCG 564

Query: 495  PSGADIALLKLSSPAVITDKVIPACLPTPNYVVADRTACYITGWGETKGTYGAGLLKEAR 674
            PSG+ + LLKL  P  +  +V   CLP   YVV   T C I GWGETKGT    +L  A 
Sbjct: 565  PSGSQLVLLKLERPVTLNQRVALICLPPERYVVPPGTKCEIAGWGETKGTGNNKVLNVAS 624

Query: 675  LPVIENKVCNRYEYLDGKVSSKELCAGHLAGGIDSCQGDSGGPLVCFEKDKYILQGVTSW 854
            L VI N+ CN      G++   E+C   L   + +C+GD GGPL CF  D ++L+G+   
Sbjct: 625  LNVISNQECNIKH--RGRIRENEMCTEGLLAPVGACEGDYGGPLACFTHDCWVLEGIIIP 682

Query: 855  GLGCALPNKPGVCVRVSRFVTWIEEIMR 938
               CA P  P + +RVS F  WI ++M+
Sbjct: 683  NRVCARPRWPAIFMRVSVFTDWIHKVMQ 710



 Score = 72.8 bits (177), Expect = 6e-13
 Identities = 31/62 (50%), Positives = 40/62 (64%)
 Frame = +3

Query: 9   GVPCQEWAAQEPHRHSIFTPGTNPRAGLEKNYCRNPDGDDNGPWCYTTNPQKLFDYCDVP 188
           G+PCQ W+ + P+ H  +TP    R GLE+N+CRNPD D  GPWCYTT+P   F  C + 
Sbjct: 129 GLPCQHWSHRFPNDHK-YTPTL--RNGLEENFCRNPDRDPGGPWCYTTDPAVRFQSCGIK 185

Query: 189 QC 194
            C
Sbjct: 186 SC 187



 Score = 70.9 bits (172), Expect = 2e-12
 Identities = 31/63 (49%), Positives = 39/63 (61%)
 Frame = +3

Query: 6   AGVPCQEWAAQEPHRHSIFTPGTNPRAGLEKNYCRNPDGDDNGPWCYTTNPQKLFDYCDV 185
           +G  CQ W  Q PH H  F PG      L+ NYCRNPDG +  PWCYTT+PQ   ++CD+
Sbjct: 209 SGRECQRWDLQHPHAHP-FEPGKFLDKDLDDNYCRNPDGSER-PWCYTTDPQVEREFCDL 266

Query: 186 PQC 194
            +C
Sbjct: 267 TRC 269



 Score = 68.2 bits (165), Expect = 2e-11
 Identities = 30/64 (46%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
 Frame = +3

Query: 6   AGVPCQEWAAQEPHRHSIFTPGTNPRAGLEKNYCRNPDGDDNGPWCYTTNPQKLFDYC-D 182
           AGVPCQ W AQ+PH+H  F P       L +N+CRNPDG +  PWC+T+ P     +C  
Sbjct: 301 AGVPCQRWDAQKPHQHR-FAPEKYACKDLRENFCRNPDGSE-APWCFTSRPGMRVAFCYQ 358

Query: 183 VPQC 194
           +P+C
Sbjct: 359 IPRC 362


>ref|NP_001002964.1| hepatocyte growth factor [Canis familiaris]
          Length = 730

 Score =  209 bits (533), Expect = 3e-54
 Identities = 118/326 (36%), Positives = 174/326 (53%), Gaps = 16/326 (4%)
 Frame = +3

Query: 6    AGVPCQEWAA--QEPHRHSIFTPGTNPRAGLEKNYCRNPDGDDNGPWCYTTNPQKLFDYC 179
            +G+ C  W    ++ HRH  + P  +    L KNYCRNPD D +GPWCYT NP   +DYC
Sbjct: 408  SGLTCSMWEKNMEDLHRHIFWEPDASK---LNKNYCRNPDDDAHGPWCYTGNPLIPWDYC 464

Query: 180  DVPQCVTSS-----------FDCGKPKVEPKKCPARVVGGCVSIPHSWPWQISLRYRYRG 326
             + +C   +             C K K        RVV G +    +  W +SL+YR + 
Sbjct: 465  PIFRCEGDTTPTIVNLDHPVISCAKTK------QLRVVNG-IPTRTNVGWMVSLKYRNK- 516

Query: 327  HFCGGTLISPEWVLTAKHCL-EKSSSPSSYKVILGAHEEHRLGEGV--QEIDVSKLFKEP 497
            H CGG+LI   W+LTA+ C   ++     Y+  LG H+ H  G+    Q ++VS+L   P
Sbjct: 517  HICGGSLIKESWILTARQCFPSRNRDLKDYEAWLGIHDVHGKGDEKRKQVLNVSQLVYGP 576

Query: 498  SGADIALLKLSSPAVITDKVIPACLPTPNYVVADRTACYITGWGETKGTYGAGLLKEARL 677
             G+D+ LLKL+ PA++ D V    LP     + ++T C + GWG T      GLL+ A L
Sbjct: 577  EGSDLVLLKLARPAILDDFVSTIDLPNYGCTIPEKTTCSVYGWGYTGSINFDGLLRVAHL 636

Query: 678  PVIENKVCNRYEYLDGKVSSKELCAGHLAGGIDSCQGDSGGPLVCFEKDKYILQGVTSWG 857
             ++ N+ C++Y      ++  E+CAG        C+GD GGPLVC +    ++ GV   G
Sbjct: 637  YIMGNEKCSQYHQGKVTLNESEICAGAENIVSGPCEGDYGGPLVCEQHKMRMVLGVIVPG 696

Query: 858  LGCALPNKPGVCVRVSRFVTWIEEIM 935
             GCA+PN+PG+ VRV+ +  WI +I+
Sbjct: 697  RGCAIPNRPGIFVRVAYYAKWIHKII 722



 Score = 82.0 bits (201), Expect = 1e-15
 Identities = 32/70 (45%), Positives = 47/70 (67%)
 Frame = +3

Query: 6   AGVPCQEWAAQEPHRHSIFTPGTNPRAGLEKNYCRNPDGDDNGPWCYTTNPQKLFDYCDV 185
           +G+ CQ W +  PH HS F P +     L++NYCRNP G++ GPWC+T+NP+  ++ CD+
Sbjct: 145 SGIKCQPWNSMIPHEHS-FLPSSYRGKDLQENYCRNPRGEEGGPWCFTSNPEVRYEVCDI 203

Query: 186 PQCVTSSFDC 215
           PQC  S  +C
Sbjct: 204 PQC--SEVEC 211



 Score = 74.3 bits (181), Expect = 2e-13
 Identities = 36/71 (50%), Positives = 46/71 (64%), Gaps = 2/71 (2%)
 Frame = +3

Query: 9   GVPCQEWAAQEPHRHSIFTPGTNPRAGLEKNYCRNPDGDDNGPWCYTTNPQKLFDYC-DV 185
           GVPCQ W +Q PH+H I TP       L +NYCRNPDG ++ PWC+TT+P     YC  +
Sbjct: 323 GVPCQRWDSQYPHQHDI-TPENFKCKDLRENYCRNPDGAES-PWCFTTDPNIRVGYCSQI 380

Query: 186 PQC-VTSSFDC 215
           P+C V+S  DC
Sbjct: 381 PKCDVSSGQDC 391



 Score = 73.2 bits (178), Expect = 5e-13
 Identities = 33/80 (41%), Positives = 43/80 (53%)
 Frame = +3

Query: 6   AGVPCQEWAAQEPHRHSIFTPGTNPRAGLEKNYCRNPDGDDNGPWCYTTNPQKLFDYCDV 185
           +G  CQ W  Q PHRH  F P   P  G + NYCRNPDG    PWCYT +P   ++YC +
Sbjct: 228 SGKICQRWDHQTPHRHK-FLPERYPDKGFDDNYCRNPDGKPR-PWCYTLDPDTPWEYCAI 285

Query: 186 PQCVTSSFDCGKPKVEPKKC 245
             C  S+ +     +E  +C
Sbjct: 286 KMCAHSTMNDTDVPMETTEC 305


>ref|XP_541697.2| PREDICTED: similar to Serine protease hepsin (Transmembrane protease,
            serine 1) [Canis familiaris]
          Length = 417

 Score =  202 bits (513), Expect = 7e-52
 Identities = 128/335 (38%), Positives = 180/335 (53%), Gaps = 23/335 (6%)
 Frame = +3

Query: 3    VAGVPCQEWAAQEPHRHS---IFTPGTNPRAGLEKNYCRNPDGDDNGPWCYTTNPQKLFD 173
            VAG+ C+E        HS   + T G N  +G    +C      D G         ++  
Sbjct: 85   VAGLSCEEMGFLRALGHSELDVRTAGANGTSGF---FCV-----DEGRLPLARRLLEVIS 136

Query: 174  YCDVPQ---CVTSSFDCGKPKVEPKKCPARVVGGCVSIPHSWPWQISLRYRYRGHFCGGT 344
             CD P+     T   DCG+ K+       R+VGG  +    WPWQ+SLRY    H CGG+
Sbjct: 137  VCDCPRGRFLATVCQDCGRRKLPVD----RIVGGQDTSLGRWPWQVSLRYD-GAHLCGGS 191

Query: 345  LISPEWVLTAKHCL-EKSSSPSSYKVILGAHEE---HRLGEGVQEIDVSK---LFKEPSG 503
            L+S +WVLTA HC  E++   S ++V  GA  +   H L  GVQ +        F++P+ 
Sbjct: 192  LLSGDWVLTAAHCFPERNRVLSRWRVFAGAVAQASPHGLQLGVQAVVYHGGYLPFRDPNS 251

Query: 504  A----DIALLKLSSPAVITDKVIPACLPTPNYVVADRTACYITGWGETKGTYG--AGLLK 665
                 DIAL+ LSSP  +T+ + P CLP     + D   C +TGWG T+  YG  AG+L+
Sbjct: 252  EENSNDIALVHLSSPLPLTEYIQPVCLPAAGQALVDGKICTVTGWGNTQ-YYGQQAGVLQ 310

Query: 666  EARLPVIENKVCNRYEYLDGKVSSKELCAGHLAGGIDSCQGDSGGPLVCFEK----DKYI 833
            EAR+P+I N++CN  ++   ++  K  CAG+  GGID+CQGDSGGP VC +      ++ 
Sbjct: 311  EARVPIISNELCNGPDFYANQIKPKMFCAGYPEGGIDACQGDSGGPFVCEDSISRTPRWR 370

Query: 834  LQGVTSWGLGCALPNKPGVCVRVSRFVTWIEEIMR 938
            L G+ SWG GCAL  KPGV  +VS F  WI + ++
Sbjct: 371  LCGIVSWGTGCALAQKPGVYTKVSDFREWIFQAIK 405


>ref|XP_539955.2| PREDICTED: similar to Tissue-type plasminogen activator precursor
            (tPA) (t-PA) (t-plasminogen activator) [Canis familiaris]
          Length = 560

 Score =  189 bits (479), Expect = 6e-48
 Identities = 121/337 (35%), Positives = 173/337 (51%), Gaps = 26/337 (7%)
 Frame = +3

Query: 6    AGVPCQEWAAQEPHRHSIFTPGTNPRA-GL-EKNYCRNPDGDDNGPWCYTTNPQKL-FDY 176
            +G PC  W ++        T  TN +A GL   NYCRNPDGD   PWC+    +KL ++Y
Sbjct: 230  SGTPCLPWNSRVLAGKFYTTWKTNAQALGLGSHNYCRNPDGDAK-PWCHVLKDRKLTWEY 288

Query: 177  CDVPQCVTSSFDCGKPKVEPKKCPARVVGGCVSIPHSWPWQISLRYRYRGH-----FCGG 341
            CDVPQC T    CG      K+   R+ GG  +   S PWQ ++  + R       FCGG
Sbjct: 289  CDVPQCST----CGLRHY--KQPQFRIKGGLYADITSHPWQAAIFVKNRRSPGERFFCGG 342

Query: 342  TLISPEWVLTAKHCLEKSSSPSSYKVILGAHEEHRLGEGVQEIDVSKLFKEPS------G 503
             LIS  WVL+A HC ++   P   KV+LG       GE  Q+ +V K             
Sbjct: 343  ILISSCWVLSAAHCFQERYPPHQLKVVLGRTYREVPGEKEQKFEVEKYITHKEFDDDTYN 402

Query: 504  ADIALLKLSSPAVI----TDKVIPACLPTPNYVVADRTACYITGWG--ETKGTYGAGLLK 665
             DIALLKL S ++     +D V  ACLP  +  + D T C ++G+G  E    + +  LK
Sbjct: 403  NDIALLKLQSDSLHCAQESDAVRTACLPEADLQLPDWTECELSGYGKHEASSPFYSERLK 462

Query: 666  EARLPVIENKVCNRYEYLDGKVSSKELCAGHLAGG------IDSCQGDSGGPLVCFEKDK 827
            EA + +  +  C      +  +++  LCAG    G       D+CQGDSGGPLVC + ++
Sbjct: 463  EAHVRLYPSSRCTSRHLFNKTITNNMLCAGDTRSGGNQANLHDACQGDSGGPLVCMKDNR 522

Query: 828  YILQGVTSWGLGCALPNKPGVCVRVSRFVTWIEEIMR 938
              L G+ SWG+GC   + PG+  +V+ ++ WI++ M+
Sbjct: 523  MTLVGIISWGIGCGQKDVPGIYTKVTNYLDWIQDNMQ 559


>ref|XP_853682.1| PREDICTED: similar to Transmembrane protease, serine 3 (Serine
           protease TADG-12) (Tumor associated
           differentially-expressed gene-12 protein) [Canis
           familiaris]
          Length = 513

 Score =  188 bits (478), Expect = 8e-48
 Identities = 106/257 (41%), Positives = 144/257 (56%), Gaps = 16/257 (6%)
 Frame = +3

Query: 213 CGKPKVEPKKCPA---------RVVGGCVSIPHSWPWQISLRYRYRGHFCGGTLISPEWV 365
           C   +V   KC A         R+VGG  S    WPWQ SL+++   H CGG++I+P WV
Sbjct: 192 CASGRVVTLKCTACGLRMGYSSRIVGGNASSLTQWPWQASLQFQGY-HLCGGSVITPVWV 250

Query: 366 LTAKHCLEKSSSPSSYKV------ILGAHEEHRLGEGVQEIDVSKLFKEPSGADIALLKL 527
           +TA HC+     P S+ V      +L +     L E +  I  SK   +  G DIAL+KL
Sbjct: 251 VTAAHCVYDLYVPKSWTVQVGLVSLLDSPAPSHLVEKI--IYHSKYKPKRLGNDIALMKL 308

Query: 528 SSPAVITDKVIPACLPTPNYVVADRTACYITGWGETK-GTYGAGLLKEARLPVIENKVCN 704
           + P    +++ P CLP       D   C+ +GWG T+ G   +  L  A +P+I NK+CN
Sbjct: 309 AGPVPFNERIQPVCLPNSEENFPDGKMCWTSGWGATEDGGDASPDLNHAAVPLISNKICN 368

Query: 705 RYEYLDGKVSSKELCAGHLAGGIDSCQGDSGGPLVCFEKDKYILQGVTSWGLGCALPNKP 884
             +   G +S   LCAG+L GG+DSCQGDSGGPLVC E+  + L G TS+G+GCA  NKP
Sbjct: 369 HRDVYGGIISPSMLCAGYLKGGVDSCQGDSGGPLVCQERRVWKLVGATSFGIGCADVNKP 428

Query: 885 GVCVRVSRFVTWIEEIM 935
           GV  R++ F+ WI E M
Sbjct: 429 GVYTRITSFLDWIHEQM 445


>ref|XP_861679.1| PREDICTED: similar to Chymotrypsinogen B precursor isoform 5 [Canis
           familiaris]
          Length = 264

 Score =  183 bits (464), Expect = 3e-46
 Identities = 97/257 (37%), Positives = 147/257 (57%), Gaps = 9/257 (3%)
 Frame = +3

Query: 201 SSFDCGKPKVEPKKCP-ARVVGGCVSIPHSWPWQISLRYRYRGHFCGGTLISPEWVLTAK 377
           ++F CG P ++P     +R+V G  ++P SWPWQ+SL+     HFCGG+LIS +WV+TA 
Sbjct: 15  TAFGCGVPAIQPVLSGLSRIVNGEDAVPGSWPWQVSLQDSTGFHFCGGSLISEDWVVTAA 74

Query: 378 HCLEKSSSPSSYKVILGAHEEHRLGEGVQEIDVSKLFKEPS------GADIALLKLSSPA 539
           HC     S ++++V+ G  ++    E +Q + ++K+FK P         DI LLKL++PA
Sbjct: 75  HC---GVSTTTHQVVAGEFDQGSDAESIQVLKIAKVFKNPKFNMFTINNDITLLKLATPA 131

Query: 540 VITDKVIPACLPTPNYVVADRTACYITGWGETKGTYG--AGLLKEARLPVIENKVCNRYE 713
             +  V   CLP         T C  TGWG TK T       L++A LP++ N  C ++ 
Sbjct: 132 RFSKTVSAVCLPQATDDFPAGTLCVTTGWGLTKHTNANTPDKLQQAALPLLSNAECKKF- 190

Query: 714 YLDGKVSSKELCAGHLAGGIDSCQGDSGGPLVCFEKDKYILQGVTSWGLGCALPNKPGVC 893
               K++   +CAG  A G+ SC GDSGGPLVC +   + L G+ SWG G    + PGV 
Sbjct: 191 -WGSKITDLMVCAG--ASGVSSCMGDSGGPLVCQKDGAWTLVGIVSWGSGTCSTSTPGVY 247

Query: 894 VRVSRFVTWIEEIMRRN 944
            RV++ + W+++I++ N
Sbjct: 248 ARVTKLIPWVQQILQAN 264


>ref|XP_852957.1| PREDICTED: similar to Chymotrypsinogen B precursor [Canis
           familiaris]
          Length = 263

 Score =  182 bits (463), Expect = 4e-46
 Identities = 97/257 (37%), Positives = 145/257 (56%), Gaps = 9/257 (3%)
 Frame = +3

Query: 201 SSFDCGKPKVEPKKCP-ARVVGGCVSIPHSWPWQISLRYRYRGHFCGGTLISPEWVLTAK 377
           SS  CG P + P+    +R++ G  ++P+SWPWQ+SL+     HFCGG+LIS  WV+TA 
Sbjct: 15  SSSGCGVPAIHPQLSGLSRIINGEDAVPNSWPWQVSLQTSSGFHFCGGSLISQHWVVTAA 74

Query: 378 HCLEKSSSPSSYKVILGAHEEHRLGEGVQEIDVSKLFKEPSGA------DIALLKLSSPA 539
           HC  + S    + V+ G  +     E VQ + ++++F+ P         DIALLKL++PA
Sbjct: 75  HCGVRKS----HLVVAGVSDHSSTEEAVQVLPIAEVFEHPLWGQDLGPYDIALLKLAAPA 130

Query: 540 VITDKVIPACLPTPNYVVADRTACYITGWGETK--GTYGAGLLKEARLPVIENKVCNRYE 713
           +++    P CLP  N      + C  TGWG T+         L++A LP++ N  C ++ 
Sbjct: 131 LLSATASPVCLPGANASFPAGSLCATTGWGRTRYNSNKTPDKLQQAALPLLSNAECKKF- 189

Query: 714 YLDGKVSSKELCAGHLAGGIDSCQGDSGGPLVCFEKDKYILQGVTSWGLGCALPNKPGVC 893
               K++   +CAG  A G+ SC GDSGGPLVC +   + L G+ SWG G   P+ PGV 
Sbjct: 190 -WGSKITDVMICAG--ASGVSSCMGDSGGPLVCQKDGAWTLVGIVSWGSGWCNPSSPGVY 246

Query: 894 VRVSRFVTWIEEIMRRN 944
             V++F+ W+ EI+  N
Sbjct: 247 TLVTKFIPWVLEILEAN 263


>ref|XP_536781.2| PREDICTED: similar to Chymotrypsinogen B precursor isoform 3 [Canis
           familiaris]
          Length = 263

 Score =  181 bits (458), Expect = 2e-45
 Identities = 96/257 (37%), Positives = 147/257 (57%), Gaps = 9/257 (3%)
 Frame = +3

Query: 201 SSFDCGKPKVEPKKCP-ARVVGGCVSIPHSWPWQISLRYRYRGHFCGGTLISPEWVLTAK 377
           ++F CG P ++P     +R+V G  ++P SWPWQ+SL+     HFCGG+LIS +WV+TA 
Sbjct: 15  TAFGCGVPAIQPVLSGLSRIVNGEDAVPGSWPWQVSLQDSTGFHFCGGSLISEDWVVTAA 74

Query: 378 HCLEKSSSPSSYKVILGAHEEHRLGEGVQEIDVSKLFKEPS------GADIALLKLSSPA 539
           HC  +++    ++V+ G  ++    E +Q + ++K+FK P         DI LLKL++PA
Sbjct: 75  HCGVRTT----HQVVAGEFDQGSDAESIQVLKIAKVFKNPKFNMFTINNDITLLKLATPA 130

Query: 540 VITDKVIPACLPTPNYVVADRTACYITGWGETKGTYG--AGLLKEARLPVIENKVCNRYE 713
             +  V   CLP         T C  TGWG TK T       L++A LP++ N  C ++ 
Sbjct: 131 RFSKTVSAVCLPQATDDFPAGTLCVTTGWGLTKHTNANTPDKLQQAALPLLSNAECKKF- 189

Query: 714 YLDGKVSSKELCAGHLAGGIDSCQGDSGGPLVCFEKDKYILQGVTSWGLGCALPNKPGVC 893
               K++   +CAG  A G+ SC GDSGGPLVC +   + L G+ SWG G    + PGV 
Sbjct: 190 -WGSKITDLMVCAG--ASGVSSCMGDSGGPLVCQKDGAWTLVGIVSWGSGTCSTSTPGVY 246

Query: 894 VRVSRFVTWIEEIMRRN 944
            RV++ + W+++I++ N
Sbjct: 247 ARVTKLIPWVQQILQAN 263


>ref|XP_535016.2| PREDICTED: similar to hyaluronan binding protein 2 [Canis familiaris]
          Length = 565

 Score =  179 bits (453), Expect = 6e-45
 Identities = 119/337 (35%), Positives = 163/337 (48%), Gaps = 40/337 (11%)
 Frame = +3

Query: 51   HSIFTPGTNPRAGLEKNYCRNPDGDDNGPWCY--TTNPQKLFDYCDVPQCVTSSFDCGKP 224
            ++IF          E N+CRNPDGD   PWC+    N +  ++YCDV  C  S+ D   P
Sbjct: 234  YNIFMEDAEAHGIGEHNFCRNPDGDKK-PWCFIKANNAKLKWEYCDVSAC--SALDIADP 290

Query: 225  ------------------KVEPKKCPARVVGGCVSIPHSWPWQISLRYRY-------RGH 329
                              + E  K   R+ GG  S     PWQ SL+          +GH
Sbjct: 291  EGSLTEPLTKLPGFDSCGRTEMTKKVKRIYGGFKSTAGKHPWQASLQTSLPLTVSMPQGH 350

Query: 330  FCGGTLISPEWVLTAKHCLEKSSSPSSYKVILGAHEEHRLGEGVQEIDVSKLFK------ 491
            FCGG LI P WVLTA HC    +   +  V+LG  +  +     Q   V K+FK      
Sbjct: 351  FCGGALIHPCWVLTAAHCTNIKARHLT--VVLGDQDLKKTEFHEQRFGVEKIFKYSLYNE 408

Query: 492  --EPSGADIALLKLSSP----AVITDKVIPACLPTPNYVVADRTACYITGWGETKGTYGA 653
              E    DIALLKL       A+ +  V   CLP  N      T C+I+GWG T+   G+
Sbjct: 409  REEIPHNDIALLKLKPVDGHCALESKYVKTVCLP--NSAFPSGTECHISGWGVTETGEGS 466

Query: 654  GLLKEARLPVIENKVCNRYEYLDGKVSSKELCAGHLAG-GIDSCQGDSGGPLVCFEKDKY 830
              L +A++ +I N +CN  +  D  +    +CAG+L   G DSCQGDSGGPL C +   Y
Sbjct: 467  RQLLDAKVRLIANTLCNSRQLYDHMIGDSMICAGNLQKPGQDSCQGDSGGPLTCEKNGTY 526

Query: 831  ILQGVTSWGLGCALPNKPGVCVRVSRFVTWIEEIMRR 941
             + G+ SWGL C    KPGV  +V++F+ WI+  +++
Sbjct: 527  YVYGIVSWGLECG--KKPGVYTQVAKFLNWIKATIQK 561


  Database: RefSeqCP
    Posted date:  Aug 1, 2006  9:25 PM
  Number of letters in database: 19,266,565
  Number of sequences in database:  33,732
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 55,111,327
Number of Sequences: 33732
Number of extensions: 1546327
Number of successful extensions: 5367
Number of sequences better than 1.0e-05: 10
Number of HSP's better than  0.0 without gapping: 4073
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4913
length of database: 19,266,565
effective HSP length: 105
effective length of database: 15,724,705
effective search space used: 4685962090
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

Search to RefSeqSP

BLASTX 2.2.10 [Oct-19-2004]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= LVR01_0062_H12
         (1212 letters)

Database: RefSeqSP 
           1040 sequences; 434,620 total letters

Searching...done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_001001259.1| enteropeptidase, light chain (L chain) [Sus ...   177   3e-46
Alignment   gi|NP_999219.1| T-plasminogen activator [Sus scrofa]                 177   3e-46
Alignment   gi|NP_999274.1| pancreatic elastase II [Sus scrofa]                  175   2e-45
Alignment   gi|NP_999356.1| tryptase [Sus scrofa]                                174   3e-45
Alignment   gi|NP_999239.1| kallikrein [Sus scrofa]                              172   1e-44
Alignment   gi|NP_999198.1| preproacrosin [Sus scrofa]                           162   1e-41
Alignment   gi|NP_999110.1| plasminogen activator [Sus scrofa]                   162   1e-41
Alignment   gi|NP_998959.1| tryptase [Sus scrofa]                                160   7e-41
Alignment   gi|NP_998988.1| pancreatic elastase I [Sus scrofa]                   156   8e-40
Alignment   gi|NP_999407.1| factor XII [Sus scrofa]                              147   4e-37

>ref|NP_001001259.1| enteropeptidase, light chain (L chain) [Sus scrofa]
          Length = 1034

 Score =  177 bits (450), Expect = 3e-46
 Identities = 103/279 (36%), Positives = 158/279 (56%), Gaps = 10/279 (3%)
 Frame = +3

Query: 129  NGPWCYTTNPQKLFDYCDVPQCVTSSFDCGKPKVEPKKCPARVVGGCVSIPHSWPWQISL 308
            NG    T + Q   D   + QC   S  CGK +V  +  P ++VGG  S   +WPW ++L
Sbjct: 761  NGSLILTASEQCFEDSLILLQCNHKS--CGKKQVAQEVSP-KIVGGNDSREGAWPWVVAL 817

Query: 309  RYRYRGHFCGGTLISPEWVLTAKHCLE-KSSSPSSYKVILGAHEEHRLGEG------VQE 467
             Y  +   CG +L+S +W+++A HC+  ++  PS +K ILG H    L         + E
Sbjct: 818  YYNGQ-LLCGASLVSRDWLVSAAHCVYGRNLEPSKWKAILGLHMTSNLTSPQIVTRLIDE 876

Query: 468  IDVSKLF-KEPSGADIALLKLSSPAVITDKVIPACLPTPNYVVADRTACYITGWGET--K 638
            I ++  + +    +DIA++ L      TD + P CLP  N V      C I GWG+   +
Sbjct: 877  IVINPHYNRRRKDSDIAMMHLEFKVNYTDYIQPICLPEENQVFPPGRICSIAGWGKVIYQ 936

Query: 639  GTYGAGLLKEARLPVIENKVCNRYEYLDGKVSSKELCAGHLAGGIDSCQGDSGGPLVCFE 818
            G+  A +L+EA +P++ N+ C + +  +  ++   +CAG+  GGIDSCQGDSGGPL+C E
Sbjct: 937  GS-PADILQEADVPLLSNEKCQQ-QMPEYNITENMMCAGYEEGGIDSCQGDSGGPLMCLE 994

Query: 819  KDKYILQGVTSWGLGCALPNKPGVCVRVSRFVTWIEEIM 935
             ++++L GVTS+G  CALPN+PGV  RV +F  WI+  +
Sbjct: 995  NNRWLLAGVTSFGYQCALPNRPGVYARVPKFTEWIQSFL 1033


>ref|NP_999219.1| T-plasminogen activator [Sus scrofa]
          Length = 562

 Score =  177 bits (450), Expect = 3e-46
 Identities = 114/309 (36%), Positives = 158/309 (51%), Gaps = 25/309 (8%)
 Frame = +3

Query: 87   GLEK-NYCRNPDGDDNGPWCYTTNPQKL-FDYCDVPQCVTSSFDCGKPKVEPKKCPARVV 260
            GL K NYCRNPDGD   PWC+     KL ++YCD+PQCVT    CG  +   K+   R+ 
Sbjct: 260  GLGKHNYCRNPDGDTQ-PWCHVLKDHKLTWEYCDLPQCVT----CGLRQY--KEPQFRIK 312

Query: 261  GGCVSIPHSWPWQISLRYRYRGH-----FCGGTLISPEWVLTAKHCLEKSSSPSSYKVIL 425
            GG  +   S PWQ ++  + R        CGG LIS  WVL+A HC ++   P   +V+L
Sbjct: 313  GGLYADITSHPWQAAIFVKNRRSPGERFLCGGILISSCWVLSAAHCFQERFPPHHVRVVL 372

Query: 426  GAHEEHRLGEGVQEIDVSKLF------KEPSGADIALLKLSSPAVI----TDKVIPACLP 575
            G       GE  Q  +V K         +    DIALL+L S ++     +D V   CLP
Sbjct: 373  GRTYRLVPGEEEQAFEVEKYIVHKEFDDDTYDNDIALLQLKSDSLTCAQESDAVRTVCLP 432

Query: 576  TPNYVVADRTACYITGWG--ETKGTYGAGLLKEARLPVIENKVCNRYEYLDGKVSSKELC 749
              N  + D T C ++G+G  E    + +  LKEA + +  +  C      +  +++  LC
Sbjct: 433  EANLQLPDWTECELSGYGKHEASSPFYSERLKEAHVRLYPSSRCTSKHLFNKTITNNMLC 492

Query: 750  AGHLAGG------IDSCQGDSGGPLVCFEKDKYILQGVTSWGLGCALPNKPGVCVRVSRF 911
            AG    G       D+CQGDSGGPLVC + +   L GV SWGLGC   + PGV  +V+ +
Sbjct: 493  AGDTRSGGDNANLHDACQGDSGGPLVCMKGNHMTLVGVISWGLGCGQKDVPGVYTKVTNY 552

Query: 912  VTWIEEIMR 938
            + WI +  R
Sbjct: 553  LNWIRDNTR 561


>ref|NP_999274.1| pancreatic elastase II [Sus scrofa]
          Length = 269

 Score =  175 bits (444), Expect = 2e-45
 Identities = 105/266 (39%), Positives = 147/266 (55%), Gaps = 16/266 (6%)
 Frame = +3

Query: 195 VTSSFDCGKPKVEPKKCPARVVGGCVSIPHSWPWQISLRYRYRG---HFCGGTLISPEWV 365
           V  +  CG P   P+    RVVGG  + P+SWPWQ+SL+Y   G   H CGGTL+   WV
Sbjct: 11  VAGALSCGLPANLPQL--PRVVGGEDARPNSWPWQVSLQYDSSGQWRHTCGGTLVDQSWV 68

Query: 366 LTAKHCLEKSSSPSSYKVILGAHEEHRLGEGVQEIDVSKLFKEP--------SGADIALL 521
           LTA HC+   SS  +Y+V+LG H       G   + VSKL            +G DIALL
Sbjct: 69  LTAAHCI---SSSRTYRVVLGRHSLSTNEPGSLAVKVSKLVVHQDWNSNQLSNGNDIALL 125

Query: 522 KLSSPAVITDKVIPACLPTPNYVVADRTACYITGWGETKGTYGAG--LLKEARLPVIENK 695
           KL+SP  +TDK+   CLP    ++ +   CY+TGWG  + T GA   +L++ +L V++  
Sbjct: 126 KLASPVSLTDKIQLGCLPAAGTILPNNYVCYVTGWGRLQ-TNGASPDILQQGQLLVVDYA 184

Query: 696 VCNRYEYLDGKVSSKELCAGHLAGGIDSCQGDSGGPLVC-FEKDKYILQGVTSWG--LGC 866
            C++  +    V +  +CAG   G I SC GDSGGPL C     ++ + G+ S+G  LGC
Sbjct: 185 TCSKPGWWGSTVKTNMICAGG-DGIISSCNGDSGGPLNCQGANGQWQVHGIVSFGSSLGC 243

Query: 867 ALPNKPGVCVRVSRFVTWIEEIMRRN 944
              +KP V  RVS ++ WI  ++  N
Sbjct: 244 NYYHKPSVFTRVSNYIDWINSVIANN 269


>ref|NP_999356.1| tryptase [Sus scrofa]
          Length = 275

 Score =  174 bits (442), Expect = 3e-45
 Identities = 100/247 (40%), Positives = 137/247 (55%), Gaps = 16/247 (6%)
 Frame = +3

Query: 249 ARVVGGCVSIPHSWPWQISLRY--RYRGHFCGGTLISPEWVLTAKHCL-EKSSSPSSYKV 419
           A +VGG  +  H WPWQ+SLR   +Y  HFCGG+LI P+WVLTA HC   + + P   +V
Sbjct: 29  AGIVGGKEAPGHKWPWQVSLRCLDQYWKHFCGGSLIHPQWVLTAAHCFGPEKADPLYIRV 88

Query: 420 ILGAHE---EHRLGEGVQEIDVSKLFKEPSGADIALLKLSSPAVITDKVIPACLPTPNYV 590
            LG      + RL    + I     + E +GADIALL+L  P  ++  V P  LP  +  
Sbjct: 89  QLGEQHLYYQDRLLLVSRIIVHPNYYDEVNGADIALLELEDPVNLSSHVQPVTLPPASET 148

Query: 591 VADRTACYITGWGETKGTYGAGL---LKEARLPVIENKVCNRYEYLDGK-------VSSK 740
               T C++TGWG+    +       LK+ R+P++EN  C+   +L          V   
Sbjct: 149 FPKGTRCWVTGWGDVHSGWPLPPPYPLKQVRVPIVENSECDMQYHLGLSTGDNIPIVRDD 208

Query: 741 ELCAGHLAGGIDSCQGDSGGPLVCFEKDKYILQGVTSWGLGCALPNKPGVCVRVSRFVTW 920
            LCAG  + G DSCQGDSGGPLVC     ++  GV SWG GCALPN+PG+  RV+ ++ W
Sbjct: 209 MLCAG--SEGHDSCQGDSGGPLVCRVNGTWLQAGVVSWGEGCALPNRPGIYTRVTHYLDW 266

Query: 921 IEEIMRR 941
           I + + R
Sbjct: 267 IHQCIPR 273


>ref|NP_999239.1| kallikrein [Sus scrofa]
          Length = 643

 Score =  172 bits (437), Expect = 1e-44
 Identities = 96/240 (40%), Positives = 138/240 (57%), Gaps = 10/240 (4%)
 Frame = +3

Query: 240  KCPARVVGGCVSIPHSWPWQISLRYRYRG--HFCGGTLISPEWVLTAKHCLEKSSSPSSY 413
            K   R+VGG  S    WPWQ+SL+ + R   H CGG++I  +WVLTA HC +  S P  +
Sbjct: 394  KANTRIVGGTDSFLGEWPWQVSLQAKLRAQNHLCGGSIIGHQWVLTAAHCFDGLSLPDIW 453

Query: 414  KVILGAHEEHRLGEG-----VQEIDVSKLFKE-PSGADIALLKLSSPAVITDKVIPACLP 575
            ++  G      + +      V+EI + + +K   SG DIALLKL +P   TD   P CLP
Sbjct: 454  RIYGGILNISEITKETPFSQVKEIIIHQNYKILESGHDIALLKLETPLNYTDFQKPICLP 513

Query: 576  TPNYVVADRTACYITGWG--ETKGTYGAGLLKEARLPVIENKVCNRYEYLDGKVSSKELC 749
            + +      T C++TGWG  E KG     +L++  +P++ N+ C +  Y D K+S + +C
Sbjct: 514  SRDDTNVVYTNCWVTGWGFTEEKGEI-QNILQKVNIPLVSNEECQK-SYRDHKISKQMIC 571

Query: 750  AGHLAGGIDSCQGDSGGPLVCFEKDKYILQGVTSWGLGCALPNKPGVCVRVSRFVTWIEE 929
            AG+  GG D+C+G+SGGPLVC     + L G TSWG GCA   +PGV  +V  ++ WI E
Sbjct: 572  AGYKEGGKDACKGESGGPLVCKYNGIWHLVGTTSWGEGCARREQPGVYTKVIEYMDWILE 631


>ref|NP_999198.1| preproacrosin [Sus scrofa]
          Length = 400

 Score =  162 bits (410), Expect = 1e-41
 Identities = 95/259 (36%), Positives = 149/259 (57%), Gaps = 22/259 (8%)
 Frame = +3

Query: 213 CGKPKVEPKKCPARVVGGCVSIPHSWPWQISLR-YRY----RGHFCGGTLISPEWVLTAK 377
           CG    +  +   RVVGG  + P +WPW +SL+ + Y    R H CGG L++  WVLTA 
Sbjct: 25  CGLRFRQKLESGMRVVGGMSAEPGAWPWMVSLQIFMYHNNRRYHTCGGILLNSHWVLTAA 84

Query: 378 HCLEKSSSPSSYKVILGAHE-----EHRLGEGVQEIDVSKLF---KEPSGA---DIALLK 524
           HC +     + +++I GA+E        +   +QE  V ++    K  SG    DIAL+K
Sbjct: 85  HCFKNKKKVTDWRLIFGANEVVWGSNKPVKPPLQERFVEEIIIHEKYVSGLEINDIALIK 144

Query: 525 LSSPAVITDKVIPACLPT--PNYVVADRTACYITGWG--ETKGTYGAGLLKEARLPVIEN 692
           ++ P      + P CLP        A +T C++TGWG  + KG   +  L+EAR+ +I+ 
Sbjct: 145 ITPPVPCGPFIGPGCLPQFKAGPPRAPQT-CWVTGWGYLKEKGPRTSPTLQEARVALIDL 203

Query: 693 KVCNRYEYLDGKVSSKELCAGHLAGGIDSCQGDSGGPLVCFEK--DKYILQGVTSWGLGC 866
           ++CN  ++ +G+V+S  +CAG+  G ID+CQGDSGGPL+C ++  + +++ G+TSWG+GC
Sbjct: 204 ELCNSTQWYNGRVTSTNVCAGYPRGKIDTCQGDSGGPLMCRDRAENTFVVVGITSWGVGC 263

Query: 867 ALPNKPGVCVRVSRFVTWI 923
           A   +PGV      ++ WI
Sbjct: 264 ARAKRPGVYTSTWPYLNWI 282


>ref|NP_999110.1| plasminogen activator [Sus scrofa]
          Length = 442

 Score =  162 bits (410), Expect = 1e-41
 Identities = 110/318 (34%), Positives = 151/318 (47%), Gaps = 39/318 (12%)
 Frame = +3

Query: 87   GLEK-NYCRNPDGDDNGPWCYT-TNPQKLFDYCDVPQCVTSS------------------ 206
            GL K NYCRNPD +   PWCY     ++L   C VP C                      
Sbjct: 117  GLGKHNYCRNPD-NQRRPWCYVQVGLKQLVQECMVPNCSGGESHRPAYDGKNPFSTPEKV 175

Query: 207  -FDCGKPKVEPKKCPARVVGGCVSIPHSWPWQISLRYRYRG----HFCGGTLISPEWVLT 371
             F CG+  + P+    ++VGG  +   + PW  ++  R+RG    + CGG+LISP WV++
Sbjct: 176  EFQCGQKALRPR---FKIVGGKSTTIENQPWFAAIYRRHRGGSVTYVCGGSLISPCWVVS 232

Query: 372  AKHCLEKSSSPSSYKVILGAHEEHRLGEGVQEIDVSKLFKEPSGA--------DIALLKL 527
            A HC         Y V LG    H    G  + +V KL      +        DIALLK+
Sbjct: 233  ATHCFINYQHKEDYIVYLGRQTLHSSTHGEMKFEVEKLILHEDYSADSLAHHNDIALLKI 292

Query: 528  SSP----AVITDKVIPACLPTPNYVVADRTACYITGWG-ETKGTY-GAGLLKEARLPVIE 689
             +     A  +  +   CLP  N       +C I G+G E    Y     LK   + ++ 
Sbjct: 293  RTDKGQCAQPSRSIQTICLPPVNGDAHFGASCEIVGFGKEDPSDYLYPEQLKMTVVKLVS 352

Query: 690  NKVCNRYEYLDGKVSSKELCAGHLAGGIDSCQGDSGGPLVCFEKDKYILQGVTSWGLGCA 869
            ++ C +  Y   +V++K LCA       DSCQGDSGGPLVC  + +  L G+ SWG  CA
Sbjct: 353  HRECQQPHYYGSEVTTKMLCAADPQWKTDSCQGDSGGPLVCSTQGRLTLTGIVSWGRECA 412

Query: 870  LPNKPGVCVRVSRFVTWI 923
            + +KPGV  RVSRF+TWI
Sbjct: 413  MKDKPGVYTRVSRFLTWI 430


>ref|NP_998959.1| tryptase [Sus scrofa]
          Length = 277

 Score =  160 bits (404), Expect = 7e-41
 Identities = 98/267 (36%), Positives = 144/267 (53%), Gaps = 24/267 (8%)
 Frame = +3

Query: 216 GKPKVEPKKCPAR----VVGGCVSIPHSWPWQISLR-YRYR----GHFCGGTLISPEWVL 368
           G   V P + P      +VGG       +PWQ+SLR YR +     H CGG+L+ P+WVL
Sbjct: 14  GSVPVTPGRGPRHELVGIVGGHDVSTWKYPWQVSLRSYRVKLGRWMHHCGGSLVHPQWVL 73

Query: 369 TAKHCLEKSS-SPSSYKVILGAHEEHRLGEGVQEIDVSKLFKEPS-------GADIALLK 524
           TA HC++  +  P   +V +G   + +L +G Q   V ++ + P        GADIALL+
Sbjct: 74  TAAHCVDSHNLKPQDVRVQVG---QLKLYDGDQLTKVKQIIRHPKYLGFAKGGADIALLQ 130

Query: 525 LSSPAVITDKVIPACLPTPNYVVADRTACYITGWGETKGTYGAGL---LKEARLPVIENK 695
           L +P  ++ +V     P+    V     C +TGWG  K          L+E  +P++ NK
Sbjct: 131 LEAPLTLSARVNVVGTPSATLKVPKGKRCSVTGWGNIKHNLSLPPPYHLQEVEVPIVANK 190

Query: 696 VCNRYEYLDGK----VSSKELCAGHLAGGIDSCQGDSGGPLVCFEKDKYILQGVTSWGLG 863
           VCN++ Y  G     + +  LCAG  + G+DSCQGDSGGPL+C     ++  G+ SWG G
Sbjct: 191 VCNKH-YRTGPNSKPIKADMLCAG--SKGLDSCQGDSGGPLMCSWNGTWVQVGIVSWGRG 247

Query: 864 CALPNKPGVCVRVSRFVTWIEEIMRRN 944
           C L N PGV +RV  +V+WI + + R+
Sbjct: 248 CGLHNFPGVYIRVMSYVSWIYQYVPRS 274


>ref|NP_998988.1| pancreatic elastase I [Sus scrofa]
          Length = 266

 Score =  156 bits (395), Expect = 8e-40
 Identities = 95/248 (38%), Positives = 137/248 (55%), Gaps = 16/248 (6%)
 Frame = +3

Query: 249 ARVVGGCVSIPHSWPWQISLRYRYRG---HFCGGTLISPEWVLTAKHCLEKSSSPSSYKV 419
           ARVVGG  +  +SWP QISL+YR      H CGGTLI   WV+TA HC+++  +   ++V
Sbjct: 25  ARVVGGTEAQRNSWPSQISLQYRSGSSWAHTCGGTLIRQNWVMTAAHCVDRELT---FRV 81

Query: 420 ILGAHEEHRLGEGVQEIDVSKLFKEP--------SGADIALLKLSSPAVITDKVIPACLP 575
           ++G H  ++     Q + V K+   P        +G DIALL+L     +   V    LP
Sbjct: 82  VVGEHNLNQNDGTEQYVGVQKIVVHPYWNTDDVAAGYDIALLRLGQSVTLNSYVQLGVLP 141

Query: 576 TPNYVVADRTACYITGWGETKGTYG--AGLLKEARLPVIENKVCNRYEYLDGKVSSKELC 749
               ++A+ + CYITGWG T+ T G  A  L++A LP ++  + +   Y    V +  +C
Sbjct: 142 RAGTILANNSPCYITGWGLTR-TNGQLAQTLQQAYLPTVDYAILSSSSYWGSTVKNSMVC 200

Query: 750 AGHLAGGIDS-CQGDSGGPLVCFEKDKYILQGVTSW--GLGCALPNKPGVCVRVSRFVTW 920
           AG    G+ S CQGDSGGPL C    +Y + GVTS+   LGC +  KP V  RVS +++W
Sbjct: 201 AG--GDGVRSGCQGDSGGPLHCLVNGQYAVHGVTSFVSRLGCNVTRKPTVFTRVSAYISW 258

Query: 921 IEEIMRRN 944
           I  ++  N
Sbjct: 259 INNVIASN 266


>ref|NP_999407.1| factor XII [Sus scrofa]
          Length = 616

 Score =  147 bits (372), Expect = 4e-37
 Identities = 112/385 (29%), Positives = 172/385 (44%), Gaps = 76/385 (19%)
 Frame = +3

Query: 3    VAGVPCQEWAAQEPHRHSIFTPGTNPRAGLEKNYCRNPDGDDNGPWCYTTNPQKL-FDY- 176
            ++G PCQ WA++  + +       N   G +  +CRNPD D   PWC+     +L + Y 
Sbjct: 233  LSGAPCQPWASEATYWNMTAEQALNWGLG-DHAFCRNPDNDTR-PWCFVWRGDQLSWQYC 290

Query: 177  ----CDVP-----------------------------------QCVTSSF---------- 209
                C  P                                   Q +TS++          
Sbjct: 291  RLARCQAPIGEAPPILTPTQSPSEHQDSPLLSREPQPTTQTPSQNLTSAWCAPPEQRGPL 350

Query: 210  ------DCGKPKVEPKKCPARVVGGCVSIPHSWPWQISLRYRYRGHFCGGTLISPEWVLT 371
                   CG+   +      R+VGG V++P + P+  +L +    +FC G+LI+P WVLT
Sbjct: 351  PSAGLVGCGQRLRKRLSSLNRIVGGLVALPGAHPYIAALYWGQ--NFCAGSLIAPCWVLT 408

Query: 372  AKHCLEKSSSPSSYKVILGAHEEHRLGEGVQEIDVSKLFKEPSGA------DIALLKLSS 533
            A HCL+   +P    V+LG    ++  E  Q + V       S +      D+AL++L  
Sbjct: 409  AAHCLQNRPAPEELTVVLGQDRHNQSCEQCQTLAVRSYRLHESYSPKTYQHDLALVRLKE 468

Query: 534  PAV-----ITDKVIPACLP--TPNYVVADRTACYITGWG---ETKGTYGAGLLKEARLPV 683
             A       +  V P CLP    +    +   C + GWG   E    Y +  L+EA++P+
Sbjct: 469  TADGCCAHPSPFVQPVCLPRSVASSAEPEGALCEVAGWGHQFEGAEEYSS-FLQEAQVPL 527

Query: 684  IENKVCNRYEYLDGKVSSKELCAGHLAGGIDSCQGDSGGPLVCFEKD---KYILQGVTSW 854
            I  + C+  +      +   LCAG L GG D+CQGDSGGPLVC ++    + +L+G+ SW
Sbjct: 528  ISPERCSAADVHGAAFTPGMLCAGFLEGGTDACQGDSGGPLVCEDETAERQLVLRGIVSW 587

Query: 855  GLGCALPNKPGVCVRVSRFVTWIEE 929
            G GC    KPGV   V+ ++ WI+E
Sbjct: 588  GSGCGDRLKPGVYTDVANYLAWIQE 612


  Database: RefSeqSP
    Posted date:  Aug 1, 2006  7:14 PM
  Number of letters in database: 434,620
  Number of sequences in database:  1040
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,268,329
Number of Sequences: 1040
Number of extensions: 34877
Number of successful extensions: 175
Number of sequences better than 1.0e-05: 10
Number of HSP's better than  0.0 without gapping: 102
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 115
length of database: 434,620
effective HSP length: 79
effective length of database: 352,460
effective search space used: 114197040
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

Search to RefSeqHP

BLASTX 2.2.10 [Oct-19-2004]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= LVR01_0062_H12
         (1212 letters)

Database: RefSeqHP 
           39,411 sequences; 17,774,539 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_000292.1| plasminogen [Homo sapiens]                           572   e-163
Alignment   gi|NP_005568.1| lipoprotein, Lp(a) [Homo sapiens]                    521   e-148
Alignment   gi|XP_946885.1| PREDICTED: similar to Apolipoprotein(a) precurs...   503   e-142
Alignment   gi|XP_931416.1| PREDICTED: similar to Apolipoprotein(a) precurs...   503   e-142
Alignment   gi|NP_066278.2| macrophage stimulating 1 (hepatocyte growth fac...   240   2e-63
Alignment   gi|NP_001010932.1| hepatocyte growth factor isoform 3 precursor...   210   2e-54
Alignment   gi|NP_000592.3| hepatocyte growth factor isoform 1 preproprotei...   210   2e-54
Alignment   gi|NP_892028.1| hepsin (transmembrane protease, serine 1) [Homo...   204   9e-53
Alignment   gi|NP_002142.1| hepsin (transmembrane protease, serine 1) [Homo...   204   9e-53
Alignment   gi|NP_115780.1| transmembrane protease, serine 3 isoform 2 [Hom...   192   5e-49

>ref|NP_000292.1| plasminogen [Homo sapiens]
          Length = 810

 Score =  572 bits (1473), Expect = e-163
 Identities = 262/314 (83%), Positives = 282/314 (89%)
 Frame = +3

Query: 3    VAGVPCQEWAAQEPHRHSIFTPGTNPRAGLEKNYCRNPDGDDNGPWCYTTNPQKLFDYCD 182
            V G PCQ+WAAQEPHRHSIFTP TNPRAGLEKNYCRNPDGD  GPWCYTTNP+KL+DYCD
Sbjct: 497  VTGTPCQDWAAQEPHRHSIFTPETNPRAGLEKNYCRNPDGDVGGPWCYTTNPRKLYDYCD 556

Query: 183  VPQCVTSSFDCGKPKVEPKKCPARVVGGCVSIPHSWPWQISLRYRYRGHFCGGTLISPEW 362
            VPQC   SFDCGKP+VEPKKCP RVVGGCV+ PHSWPWQ+SLR R+  HFCGGTLISPEW
Sbjct: 557  VPQCAAPSFDCGKPQVEPKKCPGRVVGGCVAHPHSWPWQVSLRTRFGMHFCGGTLISPEW 616

Query: 363  VLTAKHCLEKSSSPSSYKVILGAHEEHRLGEGVQEIDVSKLFKEPSGADIALLKLSSPAV 542
            VLTA HCLEKS  PSSYKVILGAH+E  L   VQEI+VS+LF EP+  DIALLKLSSPAV
Sbjct: 617  VLTAAHCLEKSPRPSSYKVILGAHQEVNLEPHVQEIEVSRLFLEPTRKDIALLKLSSPAV 676

Query: 543  ITDKVIPACLPTPNYVVADRTACYITGWGETKGTYGAGLLKEARLPVIENKVCNRYEYLD 722
            ITDKVIPACLP+PNYVVADRT C+ITGWGET+GT+GAGLLKEA+LPVIENKVCNRYE+L+
Sbjct: 677  ITDKVIPACLPSPNYVVADRTECFITGWGETQGTFGAGLLKEAQLPVIENKVCNRYEFLN 736

Query: 723  GKVSSKELCAGHLAGGIDSCQGDSGGPLVCFEKDKYILQGVTSWGLGCALPNKPGVCVRV 902
            G+V S ELCAGHLAGG DSCQGDSGGPLVCFEKDKYILQGVTSWGLGCA PNKPGV VRV
Sbjct: 737  GRVQSTELCAGHLAGGTDSCQGDSGGPLVCFEKDKYILQGVTSWGLGCARPNKPGVYVRV 796

Query: 903  SRFVTWIEEIMRRN 944
            SRFVTWIE +MR N
Sbjct: 797  SRFVTWIEGVMRNN 810



 Score = 97.8 bits (242), Expect = 2e-20
 Identities = 38/77 (49%), Positives = 51/77 (66%)
 Frame = +3

Query: 9   GVPCQEWAAQEPHRHSIFTPGTNPRAGLEKNYCRNPDGDDNGPWCYTTNPQKLFDYCDVP 188
           G+ CQ+W++  PHR   F+P T+P  GLE+NYCRNPD D  GPWCYTT+P+K +DYCD+ 
Sbjct: 121 GITCQKWSSTSPHRPR-FSPATHPSEGLEENYCRNPDNDPQGPWCYTTDPEKRYDYCDIL 179

Query: 189 QCVTSSFDCGKPKVEPK 239
           +C      C     + K
Sbjct: 180 ECEEECMHCSGENYDGK 196



 Score = 77.8 bits (190), Expect = 2e-14
 Identities = 41/91 (45%), Positives = 53/91 (58%), Gaps = 2/91 (2%)
 Frame = +3

Query: 3   VAGVPCQEWAAQEPHRHSIFTPGTNPRAGLEKNYCRNPDGDDNGPWCYTTNPQKLFDYCD 182
           V+G  CQ W+AQ PH H+  TP   P   L++NYCRNPDG    PWC+TTN Q  ++YC 
Sbjct: 291 VSGHTCQHWSAQTPHTHNR-TPENFPCKNLDENYCRNPDGK-RAPWCHTTNSQVRWEYCK 348

Query: 183 VPQCVTS--SFDCGKPKVEPKKCPARVVGGC 269
           +P C +S  S +   P   P+  P  VV  C
Sbjct: 349 IPSCDSSPVSTEQLAPTAPPELTP--VVQDC 377



 Score = 77.8 bits (190), Expect = 2e-14
 Identities = 31/66 (46%), Positives = 44/66 (66%)
 Frame = +3

Query: 3   VAGVPCQEWAAQEPHRHSIFTPGTNPRAGLEKNYCRNPDGDDNGPWCYTTNPQKLFDYCD 182
           ++G+ CQ W +Q PH H  + P   P   L+KNYCRNPD +   PWC+TT+P K ++ CD
Sbjct: 201 MSGLECQAWDSQSPHAHG-YIPSKFPNKNLKKNYCRNPDRELR-PWCFTTDPNKRWELCD 258

Query: 183 VPQCVT 200
           +P+C T
Sbjct: 259 IPRCTT 264



 Score = 77.4 bits (189), Expect = 2e-14
 Identities = 32/62 (51%), Positives = 41/62 (66%)
 Frame = +3

Query: 9   GVPCQEWAAQEPHRHSIFTPGTNPRAGLEKNYCRNPDGDDNGPWCYTTNPQKLFDYCDVP 188
           G  CQ W++  PHRH   TP   P AGL  NYCRNPD D  GPWC+TT+P   ++YC++ 
Sbjct: 395 GKKCQSWSSMTPHRHQK-TPENYPNAGLTMNYCRNPDAD-KGPWCFTTDPSVRWEYCNLK 452

Query: 189 QC 194
           +C
Sbjct: 453 KC 454


>ref|NP_005568.1| lipoprotein, Lp(a) [Homo sapiens]
          Length = 4548

 Score =  521 bits (1343), Expect = e-148
 Identities = 241/314 (76%), Positives = 265/314 (84%)
 Frame = +3

Query: 3    VAGVPCQEWAAQEPHRHSIFTPGTNPRAGLEKNYCRNPDGDDNGPWCYTTNPQKLFDYCD 182
            V G PCQEWAAQEPHRHS F PGTN  AGLEKNYCRNPDGD NGPWCYT NP+KLFDYCD
Sbjct: 4244 VTGTPCQEWAAQEPHRHSTFIPGTNKWAGLEKNYCRNPDGDINGPWCYTMNPRKLFDYCD 4303

Query: 183  VPQCVTSSFDCGKPKVEPKKCPARVVGGCVSIPHSWPWQISLRYRYRGHFCGGTLISPEW 362
            +P C +SSFDCGKP+VEPKKCP  +VGGCV+ PHSWPWQ+SLR R+  HFCGGTLISPEW
Sbjct: 4304 IPLCASSSFDCGKPQVEPKKCPGSIVGGCVAHPHSWPWQVSLRTRFGKHFCGGTLISPEW 4363

Query: 363  VLTAKHCLEKSSSPSSYKVILGAHEEHRLGEGVQEIDVSKLFKEPSGADIALLKLSSPAV 542
            VLTA HCL+KSS PSSYKVILGAH+E  L   VQEI+VS+LF EP+ ADIALLKLS PAV
Sbjct: 4364 VLTAAHCLKKSSRPSSYKVILGAHQEVNLESHVQEIEVSRLFLEPTQADIALLKLSRPAV 4423

Query: 543  ITDKVIPACLPTPNYVVADRTACYITGWGETKGTYGAGLLKEARLPVIENKVCNRYEYLD 722
            ITDKV+PACLP+P+Y+V  RT CYITGWGET+GT+G GLLKEA+L VIEN+VCN Y+Y  
Sbjct: 4424 ITDKVMPACLPSPDYMVTARTECYITGWGETQGTFGTGLLKEAQLLVIENEVCNHYKY-- 4481

Query: 723  GKVSSKELCAGHLAGGIDSCQGDSGGPLVCFEKDKYILQGVTSWGLGCALPNKPGVCVRV 902
                   +CA HLA G DSCQGDSGGPLVCFEKDKYILQGVTSWGLGCA PNKPGV  RV
Sbjct: 4482 -------ICAEHLARGTDSCQGDSGGPLVCFEKDKYILQGVTSWGLGCARPNKPGVYARV 4534

Query: 903  SRFVTWIEEIMRRN 944
            SRFVTWIE +MR N
Sbjct: 4535 SRFVTWIEGMMRNN 4548



 Score = 75.9 bits (185), Expect = 7e-14
 Identities = 32/67 (47%), Positives = 44/67 (65%)
 Frame = +3

Query: 3    VAGVPCQEWAAQEPHRHSIFTPGTNPRAGLEKNYCRNPDGDDNGPWCYTTNPQKLFDYCD 182
            V G  CQ W++  PH+HS  TP   P AGL +NYCRNPD +   PWCYT +P   ++YC+
Sbjct: 3578 VTGRTCQAWSSMTPHQHSR-TPENYPNAGLTRNYCRNPDAEIR-PWCYTMDPSVRWEYCN 3635

Query: 183  VPQCVTS 203
            + QC+ +
Sbjct: 3636 LTQCLVT 3642



 Score = 73.6 bits (179), Expect = 3e-13
 Identities = 31/64 (48%), Positives = 40/64 (62%)
 Frame = +3

Query: 3    VAGVPCQEWAAQEPHRHSIFTPGTNPRAGLEKNYCRNPDGDDNGPWCYTTNPQKLFDYCD 182
            V G  CQ W++  PHRH   TP   P  GL  NYCRNPD D  GPWC+T +P   ++YC+
Sbjct: 4140 VTGRTCQSWSSMTPHRHQR-TPENYPNDGLTMNYCRNPDAD-TGPWCFTMDPSIRWEYCN 4197

Query: 183  VPQC 194
            + +C
Sbjct: 4198 LTRC 4201



 Score = 73.6 bits (179), Expect = 3e-13
 Identities = 33/64 (51%), Positives = 41/64 (64%)
 Frame = +3

Query: 3    VAGVPCQEWAAQEPHRHSIFTPGTNPRAGLEKNYCRNPDGDDNGPWCYTTNPQKLFDYCD 182
            V G  CQ W++  PH HS  TP   P AGL KNYCRNPD     PWCYTT+P   ++YC+
Sbjct: 3464 VTGRTCQAWSSMTPHSHSR-TPAYYPNAGLIKNYCRNPD-PVAAPWCYTTDPSVRWEYCN 3521

Query: 183  VPQC 194
            + +C
Sbjct: 3522 LTRC 3525



 Score = 72.0 bits (175), Expect = 1e-12
 Identities = 32/64 (50%), Positives = 40/64 (62%)
 Frame = +3

Query: 3    VAGVPCQEWAAQEPHRHSIFTPGTNPRAGLEKNYCRNPDGDDNGPWCYTTNPQKLFDYCD 182
            V G  CQ W++  PH H   TP   P AGL +NYCRNPD     PWCYTT+P   ++YC+
Sbjct: 4026 VTGRTCQSWSSMIPHWHQR-TPENYPNAGLTENYCRNPDSGKQ-PWCYTTDPCVRWEYCN 4083

Query: 183  VPQC 194
            + QC
Sbjct: 4084 LTQC 4087



 Score = 69.7 bits (169), Expect = 5e-12
 Identities = 34/79 (43%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
 Frame = +3

Query: 3    VAGVPCQEWAAQEPHRHSIFTPGTNPRAGLEKNYCRNPDGDDNGPWCYTTNPQKLFDYCD 182
            + G  CQ W++  PH H    P   P AGL +NYCRNPD +   PWCYT +P   ++YC+
Sbjct: 3912 ITGRTCQSWSSMTPHWHRRI-PLYYPNAGLTRNYCRNPDAEIR-PWCYTMDPSVRWEYCN 3969

Query: 183  VPQC-VTSSFDCGKPKVEP 236
            + +C VT S     P V P
Sbjct: 3970 LTRCPVTESSVLTTPTVAP 3988



 Score = 67.8 bits (164), Expect = 2e-11
 Identities = 32/69 (46%), Positives = 42/69 (60%), Gaps = 1/69 (1%)
 Frame = +3

Query: 3    VAGVPCQEWAAQEPHRHSIFTPGTNPRAGLEKNYCRNPDGDDNGPWCYTTNPQKLFDYCD 182
            V G  CQ W++  PH H   T    P  GL +NYCRNPD + + PWCYT +P   ++YC+
Sbjct: 3692 VTGRTCQSWSSMTPHWHQRTTE-YYPNGGLTRNYCRNPDAEIS-PWCYTMDPNVRWEYCN 3749

Query: 183  VPQC-VTSS 206
            + QC VT S
Sbjct: 3750 LTQCPVTES 3758



 Score = 67.0 bits (162), Expect = 3e-11
 Identities = 29/64 (45%), Positives = 38/64 (59%)
 Frame = +3

Query: 3    VAGVPCQEWAAQEPHRHSIFTPGTNPRAGLEKNYCRNPDGDDNGPWCYTTNPQKLFDYCD 182
            V G  CQ W++  PH H   T    P  GL +NYCRNPD +   PWCYT +P   ++YC+
Sbjct: 3798 VTGRTCQSWSSMTPHWHQRTTE-YYPNGGLTRNYCRNPDAEIR-PWCYTMDPSVRWEYCN 3855

Query: 183  VPQC 194
            + QC
Sbjct: 3856 LTQC 3859



 Score = 66.2 bits (160), Expect = 5e-11
 Identities = 31/64 (48%), Positives = 39/64 (60%)
 Frame = +3

Query: 3    VAGVPCQEWAAQEPHRHSIFTPGTNPRAGLEKNYCRNPDGDDNGPWCYTTNPQKLFDYCD 182
            V G  CQ W++  PH HS  TP   P AGL  NYCRNPD     P+CYT +P   ++YC+
Sbjct: 3350 VTGRTCQAWSSMTPHSHSR-TPEYYPNAGLIMNYCRNPD-PVAAPYCYTRDPSVRWEYCN 3407

Query: 183  VPQC 194
            + QC
Sbjct: 3408 LTQC 3411



 Score = 65.9 bits (159), Expect = 7e-11
 Identities = 31/64 (48%), Positives = 39/64 (60%)
 Frame = +3

Query: 3    VAGVPCQEWAAQEPHRHSIFTPGTNPRAGLEKNYCRNPDGDDNGPWCYTTNPQKLFDYCD 182
            V G  CQ W++  PH HS  TP   P AGL  NYCRNPD     P+CYT +P   ++YC+
Sbjct: 3236 VTGRTCQAWSSMTPHSHSR-TPEYYPNAGLIMNYCRNPDA-VAAPYCYTRDPGVRWEYCN 3293

Query: 183  VPQC 194
            + QC
Sbjct: 3294 LTQC 3297



 Score = 65.9 bits (159), Expect = 7e-11
 Identities = 31/64 (48%), Positives = 39/64 (60%)
 Frame = +3

Query: 3    VAGVPCQEWAAQEPHRHSIFTPGTNPRAGLEKNYCRNPDGDDNGPWCYTTNPQKLFDYCD 182
            V G  CQ W++  PH HS  TP   P AGL  NYCRNPD     P+CYT +P   ++YC+
Sbjct: 3122 VTGRTCQAWSSMTPHSHSR-TPEYYPNAGLIMNYCRNPDA-VAAPYCYTRDPGVRWEYCN 3179

Query: 183  VPQC 194
            + QC
Sbjct: 3180 LTQC 3183



 Score = 65.9 bits (159), Expect = 7e-11
 Identities = 31/64 (48%), Positives = 39/64 (60%)
 Frame = +3

Query: 3    VAGVPCQEWAAQEPHRHSIFTPGTNPRAGLEKNYCRNPDGDDNGPWCYTTNPQKLFDYCD 182
            V G  CQ W++  PH HS  TP   P AGL  NYCRNPD     P+CYT +P   ++YC+
Sbjct: 3008 VTGRTCQAWSSMTPHSHSR-TPEYYPNAGLIMNYCRNPDA-VAAPYCYTRDPGVRWEYCN 3065

Query: 183  VPQC 194
            + QC
Sbjct: 3066 LTQC 3069



 Score = 65.9 bits (159), Expect = 7e-11
 Identities = 31/64 (48%), Positives = 39/64 (60%)
 Frame = +3

Query: 3    VAGVPCQEWAAQEPHRHSIFTPGTNPRAGLEKNYCRNPDGDDNGPWCYTTNPQKLFDYCD 182
            V G  CQ W++  PH HS  TP   P AGL  NYCRNPD     P+CYT +P   ++YC+
Sbjct: 2894 VTGRTCQAWSSMTPHSHSR-TPEYYPNAGLIMNYCRNPDA-VAAPYCYTRDPGVRWEYCN 2951

Query: 183  VPQC 194
            + QC
Sbjct: 2952 LTQC 2955



 Score = 65.9 bits (159), Expect = 7e-11
 Identities = 31/64 (48%), Positives = 39/64 (60%)
 Frame = +3

Query: 3    VAGVPCQEWAAQEPHRHSIFTPGTNPRAGLEKNYCRNPDGDDNGPWCYTTNPQKLFDYCD 182
            V G  CQ W++  PH HS  TP   P AGL  NYCRNPD     P+CYT +P   ++YC+
Sbjct: 2780 VTGRTCQAWSSMTPHSHSR-TPEYYPNAGLIMNYCRNPDA-VAAPYCYTRDPGVRWEYCN 2837

Query: 183  VPQC 194
            + QC
Sbjct: 2838 LTQC 2841



 Score = 65.9 bits (159), Expect = 7e-11
 Identities = 31/64 (48%), Positives = 39/64 (60%)
 Frame = +3

Query: 3    VAGVPCQEWAAQEPHRHSIFTPGTNPRAGLEKNYCRNPDGDDNGPWCYTTNPQKLFDYCD 182
            V G  CQ W++  PH HS  TP   P AGL  NYCRNPD     P+CYT +P   ++YC+
Sbjct: 2666 VTGRTCQAWSSMTPHSHSR-TPEYYPNAGLIMNYCRNPDA-VAAPYCYTRDPGVRWEYCN 2723

Query: 183  VPQC 194
            + QC
Sbjct: 2724 LTQC 2727



 Score = 65.9 bits (159), Expect = 7e-11
 Identities = 31/64 (48%), Positives = 39/64 (60%)
 Frame = +3

Query: 3    VAGVPCQEWAAQEPHRHSIFTPGTNPRAGLEKNYCRNPDGDDNGPWCYTTNPQKLFDYCD 182
            V G  CQ W++  PH HS  TP   P AGL  NYCRNPD     P+CYT +P   ++YC+
Sbjct: 2552 VTGRTCQAWSSMTPHSHSR-TPEYYPNAGLIMNYCRNPDA-VAAPYCYTRDPGVRWEYCN 2609

Query: 183  VPQC 194
            + QC
Sbjct: 2610 LTQC 2613



 Score = 65.9 bits (159), Expect = 7e-11
 Identities = 31/64 (48%), Positives = 39/64 (60%)
 Frame = +3

Query: 3    VAGVPCQEWAAQEPHRHSIFTPGTNPRAGLEKNYCRNPDGDDNGPWCYTTNPQKLFDYCD 182
            V G  CQ W++  PH HS  TP   P AGL  NYCRNPD     P+CYT +P   ++YC+
Sbjct: 2438 VTGRTCQAWSSMTPHSHSR-TPEYYPNAGLIMNYCRNPDA-VAAPYCYTRDPGVRWEYCN 2495

Query: 183  VPQC 194
            + QC
Sbjct: 2496 LTQC 2499



 Score = 65.9 bits (159), Expect = 7e-11
 Identities = 31/64 (48%), Positives = 39/64 (60%)
 Frame = +3

Query: 3    VAGVPCQEWAAQEPHRHSIFTPGTNPRAGLEKNYCRNPDGDDNGPWCYTTNPQKLFDYCD 182
            V G  CQ W++  PH HS  TP   P AGL  NYCRNPD     P+CYT +P   ++YC+
Sbjct: 2324 VTGRTCQAWSSMTPHSHSR-TPEYYPNAGLIMNYCRNPDA-VAAPYCYTRDPGVRWEYCN 2381

Query: 183  VPQC 194
            + QC
Sbjct: 2382 LTQC 2385



 Score = 65.9 bits (159), Expect = 7e-11
 Identities = 31/64 (48%), Positives = 39/64 (60%)
 Frame = +3

Query: 3    VAGVPCQEWAAQEPHRHSIFTPGTNPRAGLEKNYCRNPDGDDNGPWCYTTNPQKLFDYCD 182
            V G  CQ W++  PH HS  TP   P AGL  NYCRNPD     P+CYT +P   ++YC+
Sbjct: 2210 VTGRTCQAWSSMTPHSHSR-TPEYYPNAGLIMNYCRNPDA-VAAPYCYTRDPGVRWEYCN 2267

Query: 183  VPQC 194
            + QC
Sbjct: 2268 LTQC 2271



 Score = 65.9 bits (159), Expect = 7e-11
 Identities = 31/64 (48%), Positives = 39/64 (60%)
 Frame = +3

Query: 3    VAGVPCQEWAAQEPHRHSIFTPGTNPRAGLEKNYCRNPDGDDNGPWCYTTNPQKLFDYCD 182
            V G  CQ W++  PH HS  TP   P AGL  NYCRNPD     P+CYT +P   ++YC+
Sbjct: 2096 VTGRTCQAWSSMTPHSHSR-TPEYYPNAGLIMNYCRNPDA-VAAPYCYTRDPGVRWEYCN 2153

Query: 183  VPQC 194
            + QC
Sbjct: 2154 LTQC 2157



 Score = 65.9 bits (159), Expect = 7e-11
 Identities = 31/64 (48%), Positives = 39/64 (60%)
 Frame = +3

Query: 3    VAGVPCQEWAAQEPHRHSIFTPGTNPRAGLEKNYCRNPDGDDNGPWCYTTNPQKLFDYCD 182
            V G  CQ W++  PH HS  TP   P AGL  NYCRNPD     P+CYT +P   ++YC+
Sbjct: 1982 VTGRTCQAWSSMTPHSHSR-TPEYYPNAGLIMNYCRNPDA-VAAPYCYTRDPGVRWEYCN 2039

Query: 183  VPQC 194
            + QC
Sbjct: 2040 LTQC 2043



 Score = 65.9 bits (159), Expect = 7e-11
 Identities = 31/64 (48%), Positives = 39/64 (60%)
 Frame = +3

Query: 3    VAGVPCQEWAAQEPHRHSIFTPGTNPRAGLEKNYCRNPDGDDNGPWCYTTNPQKLFDYCD 182
            V G  CQ W++  PH HS  TP   P AGL  NYCRNPD     P+CYT +P   ++YC+
Sbjct: 1868 VTGRTCQAWSSMTPHSHSR-TPEYYPNAGLIMNYCRNPDA-VAAPYCYTRDPGVRWEYCN 1925

Query: 183  VPQC 194
            + QC
Sbjct: 1926 LTQC 1929



 Score = 65.9 bits (159), Expect = 7e-11
 Identities = 31/64 (48%), Positives = 39/64 (60%)
 Frame = +3

Query: 3    VAGVPCQEWAAQEPHRHSIFTPGTNPRAGLEKNYCRNPDGDDNGPWCYTTNPQKLFDYCD 182
            V G  CQ W++  PH HS  TP   P AGL  NYCRNPD     P+CYT +P   ++YC+
Sbjct: 1754 VTGRTCQAWSSMTPHSHSR-TPEYYPNAGLIMNYCRNPDA-VAAPYCYTRDPGVRWEYCN 1811

Query: 183  VPQC 194
            + QC
Sbjct: 1812 LTQC 1815



 Score = 65.9 bits (159), Expect = 7e-11
 Identities = 31/64 (48%), Positives = 39/64 (60%)
 Frame = +3

Query: 3    VAGVPCQEWAAQEPHRHSIFTPGTNPRAGLEKNYCRNPDGDDNGPWCYTTNPQKLFDYCD 182
            V G  CQ W++  PH HS  TP   P AGL  NYCRNPD     P+CYT +P   ++YC+
Sbjct: 1640 VTGRTCQAWSSMTPHSHSR-TPEYYPNAGLIMNYCRNPDA-VAAPYCYTRDPGVRWEYCN 1697

Query: 183  VPQC 194
            + QC
Sbjct: 1698 LTQC 1701



 Score = 65.9 bits (159), Expect = 7e-11
 Identities = 31/64 (48%), Positives = 39/64 (60%)
 Frame = +3

Query: 3    VAGVPCQEWAAQEPHRHSIFTPGTNPRAGLEKNYCRNPDGDDNGPWCYTTNPQKLFDYCD 182
            V G  CQ W++  PH HS  TP   P AGL  NYCRNPD     P+CYT +P   ++YC+
Sbjct: 1526 VTGRTCQAWSSMTPHSHSR-TPEYYPNAGLIMNYCRNPDA-VAAPYCYTRDPGVRWEYCN 1583

Query: 183  VPQC 194
            + QC
Sbjct: 1584 LTQC 1587



 Score = 65.9 bits (159), Expect = 7e-11
 Identities = 31/64 (48%), Positives = 39/64 (60%)
 Frame = +3

Query: 3    VAGVPCQEWAAQEPHRHSIFTPGTNPRAGLEKNYCRNPDGDDNGPWCYTTNPQKLFDYCD 182
            V G  CQ W++  PH HS  TP   P AGL  NYCRNPD     P+CYT +P   ++YC+
Sbjct: 1412 VTGRTCQAWSSMTPHSHSR-TPEYYPNAGLIMNYCRNPDA-VAAPYCYTRDPGVRWEYCN 1469

Query: 183  VPQC 194
            + QC
Sbjct: 1470 LTQC 1473



 Score = 65.9 bits (159), Expect = 7e-11
 Identities = 31/64 (48%), Positives = 39/64 (60%)
 Frame = +3

Query: 3    VAGVPCQEWAAQEPHRHSIFTPGTNPRAGLEKNYCRNPDGDDNGPWCYTTNPQKLFDYCD 182
            V G  CQ W++  PH HS  TP   P AGL  NYCRNPD     P+CYT +P   ++YC+
Sbjct: 1298 VTGRTCQAWSSMTPHSHSR-TPEYYPNAGLIMNYCRNPDA-VAAPYCYTRDPGVRWEYCN 1355

Query: 183  VPQC 194
            + QC
Sbjct: 1356 LTQC 1359



 Score = 65.9 bits (159), Expect = 7e-11
 Identities = 31/64 (48%), Positives = 39/64 (60%)
 Frame = +3

Query: 3    VAGVPCQEWAAQEPHRHSIFTPGTNPRAGLEKNYCRNPDGDDNGPWCYTTNPQKLFDYCD 182
            V G  CQ W++  PH HS  TP   P AGL  NYCRNPD     P+CYT +P   ++YC+
Sbjct: 1184 VTGRTCQAWSSMTPHSHSR-TPEYYPNAGLIMNYCRNPDA-VAAPYCYTRDPGVRWEYCN 1241

Query: 183  VPQC 194
            + QC
Sbjct: 1242 LTQC 1245



 Score = 65.9 bits (159), Expect = 7e-11
 Identities = 31/64 (48%), Positives = 39/64 (60%)
 Frame = +3

Query: 3    VAGVPCQEWAAQEPHRHSIFTPGTNPRAGLEKNYCRNPDGDDNGPWCYTTNPQKLFDYCD 182
            V G  CQ W++  PH HS  TP   P AGL  NYCRNPD     P+CYT +P   ++YC+
Sbjct: 1070 VTGRTCQAWSSMTPHSHSR-TPEYYPNAGLIMNYCRNPDA-VAAPYCYTRDPGVRWEYCN 1127

Query: 183  VPQC 194
            + QC
Sbjct: 1128 LTQC 1131



 Score = 65.9 bits (159), Expect = 7e-11
 Identities = 31/64 (48%), Positives = 39/64 (60%)
 Frame = +3

Query: 3    VAGVPCQEWAAQEPHRHSIFTPGTNPRAGLEKNYCRNPDGDDNGPWCYTTNPQKLFDYCD 182
            V G  CQ W++  PH HS  TP   P AGL  NYCRNPD     P+CYT +P   ++YC+
Sbjct: 956  VTGRTCQAWSSMTPHSHSR-TPEYYPNAGLIMNYCRNPDA-VAAPYCYTRDPGVRWEYCN 1013

Query: 183  VPQC 194
            + QC
Sbjct: 1014 LTQC 1017



 Score = 65.9 bits (159), Expect = 7e-11
 Identities = 31/64 (48%), Positives = 39/64 (60%)
 Frame = +3

Query: 3    VAGVPCQEWAAQEPHRHSIFTPGTNPRAGLEKNYCRNPDGDDNGPWCYTTNPQKLFDYCD 182
            V G  CQ W++  PH HS  TP   P AGL  NYCRNPD     P+CYT +P   ++YC+
Sbjct: 842  VTGRTCQAWSSMTPHSHSR-TPEYYPNAGLIMNYCRNPDA-VAAPYCYTRDPGVRWEYCN 899

Query: 183  VPQC 194
            + QC
Sbjct: 900  LTQC 903



 Score = 65.9 bits (159), Expect = 7e-11
 Identities = 31/64 (48%), Positives = 39/64 (60%)
 Frame = +3

Query: 3   VAGVPCQEWAAQEPHRHSIFTPGTNPRAGLEKNYCRNPDGDDNGPWCYTTNPQKLFDYCD 182
           V G  CQ W++  PH HS  TP   P AGL  NYCRNPD     P+CYT +P   ++YC+
Sbjct: 728 VTGRTCQAWSSMTPHSHSR-TPEYYPNAGLIMNYCRNPDA-VAAPYCYTRDPGVRWEYCN 785

Query: 183 VPQC 194
           + QC
Sbjct: 786 LTQC 789



 Score = 65.9 bits (159), Expect = 7e-11
 Identities = 31/64 (48%), Positives = 39/64 (60%)
 Frame = +3

Query: 3   VAGVPCQEWAAQEPHRHSIFTPGTNPRAGLEKNYCRNPDGDDNGPWCYTTNPQKLFDYCD 182
           V G  CQ W++  PH HS  TP   P AGL  NYCRNPD     P+CYT +P   ++YC+
Sbjct: 614 VTGRTCQAWSSMTPHSHSR-TPEYYPNAGLIMNYCRNPDA-VAAPYCYTRDPGVRWEYCN 671

Query: 183 VPQC 194
           + QC
Sbjct: 672 LTQC 675



 Score = 65.9 bits (159), Expect = 7e-11
 Identities = 31/64 (48%), Positives = 39/64 (60%)
 Frame = +3

Query: 3   VAGVPCQEWAAQEPHRHSIFTPGTNPRAGLEKNYCRNPDGDDNGPWCYTTNPQKLFDYCD 182
           V G  CQ W++  PH HS  TP   P AGL  NYCRNPD     P+CYT +P   ++YC+
Sbjct: 500 VTGRTCQAWSSMTPHSHSR-TPEYYPNAGLIMNYCRNPDA-VAAPYCYTRDPGVRWEYCN 557

Query: 183 VPQC 194
           + QC
Sbjct: 558 LTQC 561



 Score = 65.9 bits (159), Expect = 7e-11
 Identities = 31/64 (48%), Positives = 39/64 (60%)
 Frame = +3

Query: 3   VAGVPCQEWAAQEPHRHSIFTPGTNPRAGLEKNYCRNPDGDDNGPWCYTTNPQKLFDYCD 182
           V G  CQ W++  PH HS  TP   P AGL  NYCRNPD     P+CYT +P   ++YC+
Sbjct: 386 VTGRTCQAWSSMTPHSHSR-TPEYYPNAGLIMNYCRNPDA-VAAPYCYTRDPGVRWEYCN 443

Query: 183 VPQC 194
           + QC
Sbjct: 444 LTQC 447



 Score = 65.9 bits (159), Expect = 7e-11
 Identities = 31/64 (48%), Positives = 39/64 (60%)
 Frame = +3

Query: 3   VAGVPCQEWAAQEPHRHSIFTPGTNPRAGLEKNYCRNPDGDDNGPWCYTTNPQKLFDYCD 182
           V G  CQ W++  PH HS  TP   P AGL  NYCRNPD     P+CYT +P   ++YC+
Sbjct: 272 VTGRTCQAWSSMTPHSHSR-TPEYYPNAGLIMNYCRNPDA-VAAPYCYTRDPGVRWEYCN 329

Query: 183 VPQC 194
           + QC
Sbjct: 330 LTQC 333



 Score = 65.9 bits (159), Expect = 7e-11
 Identities = 31/64 (48%), Positives = 39/64 (60%)
 Frame = +3

Query: 3   VAGVPCQEWAAQEPHRHSIFTPGTNPRAGLEKNYCRNPDGDDNGPWCYTTNPQKLFDYCD 182
           V G  CQ W++  PH HS  TP   P AGL  NYCRNPD     P+CYT +P   ++YC+
Sbjct: 158 VTGRTCQAWSSMTPHSHSR-TPEYYPNAGLIMNYCRNPDA-VAAPYCYTRDPGVRWEYCN 215

Query: 183 VPQC 194
           + QC
Sbjct: 216 LTQC 219



 Score = 63.2 bits (152), Expect = 4e-10
 Identities = 29/64 (45%), Positives = 39/64 (60%)
 Frame = +3

Query: 3   VAGVPCQEWAAQEPHRHSIFTPGTNPRAGLEKNYCRNPDGDDNGPWCYTTNPQKLFDYCD 182
           V G  CQ W++  PH+H+  T    P AGL  NYCRNPD     P+CYT +P   ++YC+
Sbjct: 44  VTGRTCQAWSSMTPHQHNRTTENY-PNAGLIMNYCRNPDAVA-APYCYTRDPGVRWEYCN 101

Query: 183 VPQC 194
           + QC
Sbjct: 102 LTQC 105


>ref|XP_946885.1| PREDICTED: similar to Apolipoprotein(a) precursor (Apo(a)) (Lp(a))
           [Homo sapiens]
          Length = 440

 Score =  503 bits (1296), Expect = e-142
 Identities = 232/304 (76%), Positives = 256/304 (84%)
 Frame = +3

Query: 3   VAGVPCQEWAAQEPHRHSIFTPGTNPRAGLEKNYCRNPDGDDNGPWCYTTNPQKLFDYCD 182
           V G PCQEWAAQEPHRHS F PGTN  AGLEKNYCRNPDGD NGPWCYT NP+KLFDYCD
Sbjct: 75  VTGTPCQEWAAQEPHRHSTFIPGTNKWAGLEKNYCRNPDGDINGPWCYTMNPRKLFDYCD 134

Query: 183 VPQCVTSSFDCGKPKVEPKKCPARVVGGCVSIPHSWPWQISLRYRYRGHFCGGTLISPEW 362
           +P C +SSFDCGKP+VEPKKCP  +VGGCV+ PHSWPWQ+SLR R+  HFCGGTLISPEW
Sbjct: 135 IPLCASSSFDCGKPQVEPKKCPGSIVGGCVAHPHSWPWQVSLRTRFGKHFCGGTLISPEW 194

Query: 363 VLTAKHCLEKSSSPSSYKVILGAHEEHRLGEGVQEIDVSKLFKEPSGADIALLKLSSPAV 542
           VLTA HCL+KSS PSSYKVILGAH+E  L   VQEI+VS+LF EP+ ADIALLKLS PAV
Sbjct: 195 VLTAAHCLKKSSRPSSYKVILGAHQEVNLESHVQEIEVSRLFLEPTQADIALLKLSRPAV 254

Query: 543 ITDKVIPACLPTPNYVVADRTACYITGWGETKGTYGAGLLKEARLPVIENKVCNRYEYLD 722
           ITDKV+PACLP+P+Y+V  RT CYITGWGET+GT+G GLLKEA+L VIEN+VCN Y+Y  
Sbjct: 255 ITDKVMPACLPSPDYMVTARTECYITGWGETQGTFGTGLLKEAQLLVIENEVCNHYKY-- 312

Query: 723 GKVSSKELCAGHLAGGIDSCQGDSGGPLVCFEKDKYILQGVTSWGLGCALPNKPGVCVRV 902
                  +CA HLA G DSCQGDSGGPLVCFEKDKYILQGVTSWGLGCA PNKPGV  RV
Sbjct: 313 -------ICAEHLARGTDSCQGDSGGPLVCFEKDKYILQGVTSWGLGCARPNKPGVYARV 365

Query: 903 SRFV 914
           SR +
Sbjct: 366 SRMI 369


>ref|XP_931416.1| PREDICTED: similar to Apolipoprotein(a) precursor (Apo(a)) (Lp(a))
           [Homo sapiens]
          Length = 440

 Score =  503 bits (1296), Expect = e-142
 Identities = 232/304 (76%), Positives = 256/304 (84%)
 Frame = +3

Query: 3   VAGVPCQEWAAQEPHRHSIFTPGTNPRAGLEKNYCRNPDGDDNGPWCYTTNPQKLFDYCD 182
           V G PCQEWAAQEPHRHS F PGTN  AGLEKNYCRNPDGD NGPWCYT NP+KLFDYCD
Sbjct: 75  VTGTPCQEWAAQEPHRHSTFIPGTNKWAGLEKNYCRNPDGDINGPWCYTMNPRKLFDYCD 134

Query: 183 VPQCVTSSFDCGKPKVEPKKCPARVVGGCVSIPHSWPWQISLRYRYRGHFCGGTLISPEW 362
           +P C +SSFDCGKP+VEPKKCP  +VGGCV+ PHSWPWQ+SLR R+  HFCGGTLISPEW
Sbjct: 135 IPLCASSSFDCGKPQVEPKKCPGSIVGGCVAHPHSWPWQVSLRTRFGKHFCGGTLISPEW 194

Query: 363 VLTAKHCLEKSSSPSSYKVILGAHEEHRLGEGVQEIDVSKLFKEPSGADIALLKLSSPAV 542
           VLTA HCL+KSS PSSYKVILGAH+E  L   VQEI+VS+LF EP+ ADIALLKLS PAV
Sbjct: 195 VLTAAHCLKKSSRPSSYKVILGAHQEVNLESHVQEIEVSRLFLEPTQADIALLKLSRPAV 254

Query: 543 ITDKVIPACLPTPNYVVADRTACYITGWGETKGTYGAGLLKEARLPVIENKVCNRYEYLD 722
           ITDKV+PACLP+P+Y+V  RT CYITGWGET+GT+G GLLKEA+L VIEN+VCN Y+Y  
Sbjct: 255 ITDKVMPACLPSPDYMVTARTECYITGWGETQGTFGTGLLKEAQLLVIENEVCNHYKY-- 312

Query: 723 GKVSSKELCAGHLAGGIDSCQGDSGGPLVCFEKDKYILQGVTSWGLGCALPNKPGVCVRV 902
                  +CA HLA G DSCQGDSGGPLVCFEKDKYILQGVTSWGLGCA PNKPGV  RV
Sbjct: 313 -------ICAEHLARGTDSCQGDSGGPLVCFEKDKYILQGVTSWGLGCARPNKPGVYARV 365

Query: 903 SRFV 914
           SR +
Sbjct: 366 SRMI 369


>ref|NP_066278.2| macrophage stimulating 1 (hepatocyte growth factor-like) [Homo
            sapiens]
          Length = 711

 Score =  240 bits (613), Expect = 2e-63
 Identities = 133/328 (40%), Positives = 183/328 (55%), Gaps = 18/328 (5%)
 Frame = +3

Query: 9    GVPCQEWAAQEPHRHSIFTPGTNPRAGLEKNYCRNPDGDDNGPWCYTTNPQKLFDYCDVP 188
            GV CQ W+A+ PH+   FT  + P A LE+N+CRNPDGD +GPWCYT +P+  FDYC + 
Sbjct: 388  GVQCQRWSAETPHKPQ-FTFTSEPHAQLEENFCRNPDGDSHGPWCYTMDPRTPFDYCALR 446

Query: 189  QCVTSS------------FD-CGK--PKVEPKKCPARVVGGCVSIPHSWPWQISLRYRYR 323
            +C                F+ CGK   +++ ++   RVVGG    P + PW +SLR R  
Sbjct: 447  RCADDQPPSILDPPDQVQFEKCGKRVDRLDQRRSKLRVVGGH---PGNSPWTVSLRNRQG 503

Query: 324  GHFCGGTLISPEWVLTAKHCLEKSSSP-SSYKVILGA-HEEHRLGE-GVQEIDVSKLFKE 494
             HFCGG+L+  +W+LTA+ C      P + Y+V LG   +  + GE  +Q + V+K+   
Sbjct: 504  QHFCGGSLVKEQWILTARQCFSSCHMPLTGYEVWLGTLFQNPQHGEPSLQRVPVAKMVCG 563

Query: 495  PSGADIALLKLSSPAVITDKVIPACLPTPNYVVADRTACYITGWGETKGTYGAGLLKEAR 674
            PSG+ + LLKL     +  +V   CLP   YVV   T C I GWGETKGT    +L  A 
Sbjct: 564  PSGSQLVLLKLERSVTLNQRVALICLPPEWYVVPPGTKCEIAGWGETKGTGNDTVLNVAL 623

Query: 675  LPVIENKVCNRYEYLDGKVSSKELCAGHLAGGIDSCQGDSGGPLVCFEKDKYILQGVTSW 854
            L VI N+ CN      G+V   E+C   L   + +C+GD GGPL CF  + ++L+G+   
Sbjct: 624  LNVISNQECNIKH--RGRVRESEMCTEGLLAPVGACEGDYGGPLACFTHNCWVLEGIIIP 681

Query: 855  GLGCALPNKPGVCVRVSRFVTWIEEIMR 938
               CA    P V  RVS FV WI ++MR
Sbjct: 682  NRVCARSRWPAVFTRVSVFVDWIHKVMR 709



 Score = 77.0 bits (188), Expect = 3e-14
 Identities = 33/63 (52%), Positives = 42/63 (66%)
 Frame = +3

Query: 6   AGVPCQEWAAQEPHRHSIFTPGTNPRAGLEKNYCRNPDGDDNGPWCYTTNPQKLFDYCDV 185
           +G  CQ W  Q PH+H  F PG     GL+ NYCRNPDG +  PWCYTT+PQ   ++CD+
Sbjct: 208 SGRECQRWDLQHPHQHP-FEPGKFLDQGLDDNYCRNPDGSER-PWCYTTDPQIEREFCDL 265

Query: 186 PQC 194
           P+C
Sbjct: 266 PRC 268



 Score = 77.0 bits (188), Expect = 3e-14
 Identities = 33/64 (51%), Positives = 42/64 (65%)
 Frame = +3

Query: 3   VAGVPCQEWAAQEPHRHSIFTPGTNPRAGLEKNYCRNPDGDDNGPWCYTTNPQKLFDYCD 182
           V G+PCQ W+ + P+ H  +TP    R GLE+N+CRNPDGD  GPWCYTT+P   F  C 
Sbjct: 126 VGGLPCQAWSHKFPNDHK-YTPTL--RNGLEENFCRNPDGDPGGPWCYTTDPAVRFQSCG 182

Query: 183 VPQC 194
           +  C
Sbjct: 183 IKSC 186



 Score = 64.3 bits (155), Expect = 2e-10
 Identities = 29/58 (50%), Positives = 35/58 (60%)
 Frame = +3

Query: 6   AGVPCQEWAAQEPHRHSIFTPGTNPRAGLEKNYCRNPDGDDNGPWCYTTNPQKLFDYC 179
           AGVPCQ W AQ PH+H  FTP       L +N+CRNPDG +  PWC+T  P     +C
Sbjct: 300 AGVPCQRWDAQIPHQHR-FTPEKYACKDLRENFCRNPDGSE-APWCFTLRPGMRAAFC 355


>ref|NP_001010932.1| hepatocyte growth factor isoform 3 precursor [Homo sapiens]
          Length = 723

 Score =  210 bits (535), Expect = 2e-54
 Identities = 120/325 (36%), Positives = 175/325 (53%), Gaps = 15/325 (4%)
 Frame = +3

Query: 6    AGVPCQEWAA--QEPHRHSIFTPGTNPRAGLEKNYCRNPDGDDNGPWCYTTNPQKLFDYC 179
            +G+ C  W    ++ HRH  + P  +    L +NYCRNPD D +GPWCYT NP   +DYC
Sbjct: 403  SGLTCSMWDKNMEDLHRHIFWEPDASK---LNENYCRNPDDDAHGPWCYTGNPLIPWDYC 459

Query: 180  DVPQCVTSS-----------FDCGKPKVEPKKCPARVVGGCVSIPHSWPWQISLRYRYRG 326
             + +C   +             C K K        RVV G +    +  W +SLRYR + 
Sbjct: 460  PISRCEGDTTPTIVNLDHPVISCAKTK------QLRVVNG-IPTRTNIGWMVSLRYRNK- 511

Query: 327  HFCGGTLISPEWVLTAKHCLEKSSSPSSYKVILGAHEEHRLGEGV--QEIDVSKLFKEPS 500
            H CGG+LI   WVLTA+ C   S     Y+  LG H+ H  G+    Q ++VS+L   P 
Sbjct: 512  HICGGSLIKESWVLTARQCFP-SRDLKDYEAWLGIHDVHGRGDEKCKQVLNVSQLVYGPE 570

Query: 501  GADIALLKLSSPAVITDKVIPACLPTPNYVVADRTACYITGWGETKGTYGAGLLKEARLP 680
            G+D+ L+KL+ PAV+ D V    LP     + ++T+C + GWG T      GLL+ A L 
Sbjct: 571  GSDLVLMKLARPAVLDDFVSTIDLPNYGCTIPEKTSCSVYGWGYTGLINYDGLLRVAHLY 630

Query: 681  VIENKVCNRYEYLDGKVSSKELCAGHLAGGIDSCQGDSGGPLVCFEKDKYILQGVTSWGL 860
            ++ N+ C+++      ++  E+CAG    G   C+GD GGPLVC +    ++ GV   G 
Sbjct: 631  IMGNEKCSQHHRGKVTLNESEICAGAEKIGSGPCEGDYGGPLVCEQHKMRMVLGVIVPGR 690

Query: 861  GCALPNKPGVCVRVSRFVTWIEEIM 935
            GCA+PN+PG+ VRV+ +  WI +I+
Sbjct: 691  GCAIPNRPGIFVRVAYYAKWIHKII 715



 Score = 76.6 bits (187), Expect = 4e-14
 Identities = 30/70 (42%), Positives = 45/70 (64%)
 Frame = +3

Query: 6   AGVPCQEWAAQEPHRHSIFTPGTNPRAGLEKNYCRNPDGDDNGPWCYTTNPQKLFDYCDV 185
           +G+ CQ W++  PH HS           L++NYCRNP G++ GPWC+T+NP+  ++ CD+
Sbjct: 145 SGIKCQPWSSMIPHEHSY------RGKDLQENYCRNPRGEEGGPWCFTSNPEVRYEVCDI 198

Query: 186 PQCVTSSFDC 215
           PQC  S  +C
Sbjct: 199 PQC--SEVEC 206



 Score = 72.8 bits (177), Expect = 6e-13
 Identities = 32/80 (40%), Positives = 43/80 (53%)
 Frame = +3

Query: 6   AGVPCQEWAAQEPHRHSIFTPGTNPRAGLEKNYCRNPDGDDNGPWCYTTNPQKLFDYCDV 185
           +G  CQ W  Q PHRH  F P   P  G + NYCRNPDG    PWCYT +P   ++YC +
Sbjct: 223 SGKICQRWDHQTPHRHK-FLPERYPDKGFDDNYCRNPDGQPR-PWCYTLDPHTRWEYCAI 280

Query: 186 PQCVTSSFDCGKPKVEPKKC 245
             C  ++ +     +E  +C
Sbjct: 281 KTCADNTMNDTDVPLETTEC 300



 Score = 69.7 bits (169), Expect = 5e-12
 Identities = 32/71 (45%), Positives = 43/71 (60%), Gaps = 2/71 (2%)
 Frame = +3

Query: 9   GVPCQEWAAQEPHRHSIFTPGTNPRAGLEKNYCRNPDGDDNGPWCYTTNPQKLFDYC-DV 185
           G+PCQ W +Q PH H + TP       L +NYCRNPDG ++ PWC+TT+P     YC  +
Sbjct: 318 GIPCQRWDSQYPHEHDM-TPENFKCKDLRENYCRNPDGSES-PWCFTTDPNIRVGYCSQI 375

Query: 186 PQC-VTSSFDC 215
           P C ++   DC
Sbjct: 376 PNCDMSHGQDC 386


>ref|NP_000592.3| hepatocyte growth factor isoform 1 preproprotein [Homo sapiens]
          Length = 728

 Score =  210 bits (535), Expect = 2e-54
 Identities = 120/325 (36%), Positives = 175/325 (53%), Gaps = 15/325 (4%)
 Frame = +3

Query: 6    AGVPCQEWAA--QEPHRHSIFTPGTNPRAGLEKNYCRNPDGDDNGPWCYTTNPQKLFDYC 179
            +G+ C  W    ++ HRH  + P  +    L +NYCRNPD D +GPWCYT NP   +DYC
Sbjct: 408  SGLTCSMWDKNMEDLHRHIFWEPDASK---LNENYCRNPDDDAHGPWCYTGNPLIPWDYC 464

Query: 180  DVPQCVTSS-----------FDCGKPKVEPKKCPARVVGGCVSIPHSWPWQISLRYRYRG 326
             + +C   +             C K K        RVV G +    +  W +SLRYR + 
Sbjct: 465  PISRCEGDTTPTIVNLDHPVISCAKTK------QLRVVNG-IPTRTNIGWMVSLRYRNK- 516

Query: 327  HFCGGTLISPEWVLTAKHCLEKSSSPSSYKVILGAHEEHRLGEGV--QEIDVSKLFKEPS 500
            H CGG+LI   WVLTA+ C   S     Y+  LG H+ H  G+    Q ++VS+L   P 
Sbjct: 517  HICGGSLIKESWVLTARQCFP-SRDLKDYEAWLGIHDVHGRGDEKCKQVLNVSQLVYGPE 575

Query: 501  GADIALLKLSSPAVITDKVIPACLPTPNYVVADRTACYITGWGETKGTYGAGLLKEARLP 680
            G+D+ L+KL+ PAV+ D V    LP     + ++T+C + GWG T      GLL+ A L 
Sbjct: 576  GSDLVLMKLARPAVLDDFVSTIDLPNYGCTIPEKTSCSVYGWGYTGLINYDGLLRVAHLY 635

Query: 681  VIENKVCNRYEYLDGKVSSKELCAGHLAGGIDSCQGDSGGPLVCFEKDKYILQGVTSWGL 860
            ++ N+ C+++      ++  E+CAG    G   C+GD GGPLVC +    ++ GV   G 
Sbjct: 636  IMGNEKCSQHHRGKVTLNESEICAGAEKIGSGPCEGDYGGPLVCEQHKMRMVLGVIVPGR 695

Query: 861  GCALPNKPGVCVRVSRFVTWIEEIM 935
            GCA+PN+PG+ VRV+ +  WI +I+
Sbjct: 696  GCAIPNRPGIFVRVAYYAKWIHKII 720



 Score = 83.2 bits (204), Expect = 4e-16
 Identities = 32/70 (45%), Positives = 48/70 (68%)
 Frame = +3

Query: 6   AGVPCQEWAAQEPHRHSIFTPGTNPRAGLEKNYCRNPDGDDNGPWCYTTNPQKLFDYCDV 185
           +G+ CQ W++  PH HS F P +     L++NYCRNP G++ GPWC+T+NP+  ++ CD+
Sbjct: 145 SGIKCQPWSSMIPHEHS-FLPSSYRGKDLQENYCRNPRGEEGGPWCFTSNPEVRYEVCDI 203

Query: 186 PQCVTSSFDC 215
           PQC  S  +C
Sbjct: 204 PQC--SEVEC 211



 Score = 72.8 bits (177), Expect = 6e-13
 Identities = 32/80 (40%), Positives = 43/80 (53%)
 Frame = +3

Query: 6   AGVPCQEWAAQEPHRHSIFTPGTNPRAGLEKNYCRNPDGDDNGPWCYTTNPQKLFDYCDV 185
           +G  CQ W  Q PHRH  F P   P  G + NYCRNPDG    PWCYT +P   ++YC +
Sbjct: 228 SGKICQRWDHQTPHRHK-FLPERYPDKGFDDNYCRNPDGQPR-PWCYTLDPHTRWEYCAI 285

Query: 186 PQCVTSSFDCGKPKVEPKKC 245
             C  ++ +     +E  +C
Sbjct: 286 KTCADNTMNDTDVPLETTEC 305



 Score = 69.7 bits (169), Expect = 5e-12
 Identities = 32/71 (45%), Positives = 43/71 (60%), Gaps = 2/71 (2%)
 Frame = +3

Query: 9   GVPCQEWAAQEPHRHSIFTPGTNPRAGLEKNYCRNPDGDDNGPWCYTTNPQKLFDYC-DV 185
           G+PCQ W +Q PH H + TP       L +NYCRNPDG ++ PWC+TT+P     YC  +
Sbjct: 323 GIPCQRWDSQYPHEHDM-TPENFKCKDLRENYCRNPDGSES-PWCFTTDPNIRVGYCSQI 380

Query: 186 PQC-VTSSFDC 215
           P C ++   DC
Sbjct: 381 PNCDMSHGQDC 391


>ref|NP_892028.1| hepsin (transmembrane protease, serine 1) [Homo sapiens]
          Length = 417

 Score =  204 bits (520), Expect = 9e-53
 Identities = 129/335 (38%), Positives = 180/335 (53%), Gaps = 23/335 (6%)
 Frame = +3

Query: 3    VAGVPCQEWAAQEPHRHS---IFTPGTNPRAGLEKNYCRNPDGDDNGPWCYTTNPQKLFD 173
            VAG+ C+E        HS   + T G N  +G    +C      D G   +T    ++  
Sbjct: 85   VAGLSCEEMGFLRALTHSELDVRTAGANGTSGF---FCV-----DEGRLPHTQRLLEVIS 136

Query: 174  YCDVPQ---CVTSSFDCGKPKVEPKKCPARVVGGCVSIPHSWPWQISLRYRYRGHFCGGT 344
             CD P+         DCG+ K+       R+VGG  +    WPWQ+SLRY    H CGG+
Sbjct: 137  VCDCPRGRFLAAICQDCGRRKLPVD----RIVGGRDTSLGRWPWQVSLRYD-GAHLCGGS 191

Query: 345  LISPEWVLTAKHCL-EKSSSPSSYKVILGAHEE---HRLGEGVQEIDVSK---LFKEPSG 503
            L+S +WVLTA HC  E++   S ++V  GA  +   H L  GVQ +        F++P+ 
Sbjct: 192  LLSGDWVLTAAHCFPERNRVLSRWRVFAGAVAQASPHGLQLGVQAVVYHGGYLPFRDPNS 251

Query: 504  A----DIALLKLSSPAVITDKVIPACLPTPNYVVADRTACYITGWGETKGTYG--AGLLK 665
                 DIAL+ LSSP  +T+ + P CLP     + D   C +TGWG T+  YG  AG+L+
Sbjct: 252  EENSNDIALVHLSSPLPLTEYIQPVCLPAAGQALVDGKICTVTGWGNTQ-YYGQQAGVLQ 310

Query: 666  EARLPVIENKVCNRYEYLDGKVSSKELCAGHLAGGIDSCQGDSGGPLVCFEK----DKYI 833
            EAR+P+I N VCN  ++   ++  K  CAG+  GGID+CQGDSGGP VC +      ++ 
Sbjct: 311  EARVPIISNDVCNGADFYGNQIKPKMFCAGYPEGGIDACQGDSGGPFVCEDSISRTPRWR 370

Query: 834  LQGVTSWGLGCALPNKPGVCVRVSRFVTWIEEIMR 938
            L G+ SWG GCAL  KPGV  +VS F  WI + ++
Sbjct: 371  LCGIVSWGTGCALAQKPGVYTKVSDFREWIFQAIK 405


>ref|NP_002142.1| hepsin (transmembrane protease, serine 1) [Homo sapiens]
          Length = 417

 Score =  204 bits (520), Expect = 9e-53
 Identities = 129/335 (38%), Positives = 180/335 (53%), Gaps = 23/335 (6%)
 Frame = +3

Query: 3    VAGVPCQEWAAQEPHRHS---IFTPGTNPRAGLEKNYCRNPDGDDNGPWCYTTNPQKLFD 173
            VAG+ C+E        HS   + T G N  +G    +C      D G   +T    ++  
Sbjct: 85   VAGLSCEEMGFLRALTHSELDVRTAGANGTSGF---FCV-----DEGRLPHTQRLLEVIS 136

Query: 174  YCDVPQ---CVTSSFDCGKPKVEPKKCPARVVGGCVSIPHSWPWQISLRYRYRGHFCGGT 344
             CD P+         DCG+ K+       R+VGG  +    WPWQ+SLRY    H CGG+
Sbjct: 137  VCDCPRGRFLAAICQDCGRRKLPVD----RIVGGRDTSLGRWPWQVSLRYD-GAHLCGGS 191

Query: 345  LISPEWVLTAKHCL-EKSSSPSSYKVILGAHEE---HRLGEGVQEIDVSK---LFKEPSG 503
            L+S +WVLTA HC  E++   S ++V  GA  +   H L  GVQ +        F++P+ 
Sbjct: 192  LLSGDWVLTAAHCFPERNRVLSRWRVFAGAVAQASPHGLQLGVQAVVYHGGYLPFRDPNS 251

Query: 504  A----DIALLKLSSPAVITDKVIPACLPTPNYVVADRTACYITGWGETKGTYG--AGLLK 665
                 DIAL+ LSSP  +T+ + P CLP     + D   C +TGWG T+  YG  AG+L+
Sbjct: 252  EENSNDIALVHLSSPLPLTEYIQPVCLPAAGQALVDGKICTVTGWGNTQ-YYGQQAGVLQ 310

Query: 666  EARLPVIENKVCNRYEYLDGKVSSKELCAGHLAGGIDSCQGDSGGPLVCFEK----DKYI 833
            EAR+P+I N VCN  ++   ++  K  CAG+  GGID+CQGDSGGP VC +      ++ 
Sbjct: 311  EARVPIISNDVCNGADFYGNQIKPKMFCAGYPEGGIDACQGDSGGPFVCEDSISRTPRWR 370

Query: 834  LQGVTSWGLGCALPNKPGVCVRVSRFVTWIEEIMR 938
            L G+ SWG GCAL  KPGV  +VS F  WI + ++
Sbjct: 371  LCGIVSWGTGCALAQKPGVYTKVSDFREWIFQAIK 405


>ref|NP_115780.1| transmembrane protease, serine 3 isoform 2 [Homo sapiens]
          Length = 327

 Score =  192 bits (488), Expect = 5e-49
 Identities = 99/238 (41%), Positives = 142/238 (59%), Gaps = 6/238 (2%)
 Frame = +3

Query: 249 ARVVGGCVSIPHSWPWQISLRYRYRGHFCGGTLISPEWVLTAKHCLEKSSSPSSYKVILG 428
           +R+VGG +S+   WPWQ SL+++   H CGG++I+P W++TA HC+     P S+ + +G
Sbjct: 88  SRIVGGNMSLLSQWPWQASLQFQGY-HLCGGSVITPLWIITAAHCVYDLYLPKSWTIQVG 146

Query: 429 AH---EEHRLGEGVQEIDVSKLFKEPS-GADIALLKLSSPAVITDKVIPACLPTPNYVVA 596
                +       V++I     +K    G DIAL+KL+ P    + + P CLP       
Sbjct: 147 LVSLLDNPAPSHLVEKIVYHSKYKPKRLGNDIALMKLAGPLTFNEMIQPVCLPNSEENFP 206

Query: 597 DRTACYITGWGETKGTYG--AGLLKEARLPVIENKVCNRYEYLDGKVSSKELCAGHLAGG 770
           D   C+ +GWG T+   G  + +L  A +P+I NK+CN  +   G +S   LCAG+L GG
Sbjct: 207 DGKVCWTSGWGATEDGAGDASPVLNHAAVPLISNKICNHRDVYGGIISPSMLCAGYLTGG 266

Query: 771 IDSCQGDSGGPLVCFEKDKYILQGVTSWGLGCALPNKPGVCVRVSRFVTWIEEIMRRN 944
           +DSCQGDSGGPLVC E+  + L G TS+G+GCA  NKPGV  RV+ F+ WI E M R+
Sbjct: 267 VDSCQGDSGGPLVCQERRLWKLVGATSFGIGCAEVNKPGVYTRVTSFLDWIHEQMERD 324


  Database: RefSeqHP
    Posted date:  Aug 2, 2006 12:57 AM
  Number of letters in database: 17,774,539
  Number of sequences in database:  39,411
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 53,508,559
Number of Sequences: 39411
Number of extensions: 1557109
Number of successful extensions: 5863
Number of sequences better than 1.0e-05: 10
Number of HSP's better than  0.0 without gapping: 4255
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5211
length of database: 17,774,539
effective HSP length: 104
effective length of database: 13,675,795
effective search space used: 4089062705
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

Search to RefSeqMP

BLASTX 2.2.10 [Oct-19-2004]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= LVR01_0062_H12
         (1212 letters)

Database: RefSeqMP 
           45,328 sequences; 21,768,885 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_032903.2| plasminogen [Mus musculus]                           548   e-156
Alignment   gi|NP_032269.2| macrophage stimulating 1 (hepatocyte growth fac...   240   2e-63
Alignment   gi|NP_034557.2| hepatocyte growth factor [Mus musculus]              208   8e-54
Alignment   gi|NP_032307.1| hepsin [Mus musculus]                                196   5e-50
Alignment   gi|NP_542765.1| transmembrane protease, serine 3 [Mus musculus]      191   2e-48
Alignment   gi|NP_038949.2| transmembrane protease, serine 8 (intestinal) [...   187   2e-47
Alignment   gi|XP_926294.1| PREDICTED: similar to protease, serine, 33 isof...   184   2e-46
Alignment   gi|XP_926285.1| PREDICTED: similar to protease, serine, 33 isof...   184   2e-46
Alignment   gi|XP_914273.1| PREDICTED: similar to protease, serine, 33 isof...   184   2e-46
Alignment   gi|XP_983154.1| PREDICTED: protease, serine, 33 isoform 3 [Mus ...   184   2e-46

>ref|NP_032903.2| plasminogen [Mus musculus]
          Length = 812

 Score =  548 bits (1413), Expect = e-156
 Identities = 255/315 (80%), Positives = 275/315 (87%), Gaps = 2/315 (0%)
 Frame = +3

Query: 6    AGVPCQEWAAQEPHRHSIFTPGTNPRAGLEKNYCRNPDGDDNGPWCYTTNPQKLFDYCDV 185
            AG PCQ WAAQEPHRHSIFTP TNPRAGLEKNYCRNPDGD NGPWCYTTNP+KL+DYCD+
Sbjct: 498  AGTPCQGWAAQEPHRHSIFTPQTNPRAGLEKNYCRNPDGDVNGPWCYTTNPRKLYDYCDI 557

Query: 186  PQCVT-SSFDCGKPKVEPKKCPARVVGGCVSIPHSWPWQISLRYRYRG-HFCGGTLISPE 359
            P C + SSF+CGKP+VEPKKCP RVVGGCV+ PHSWPWQISLR R+ G HFCGGTLI+PE
Sbjct: 558  PLCASASSFECGKPQVEPKKCPGRVVGGCVANPHSWPWQISLRTRFTGQHFCGGTLIAPE 617

Query: 360  WVLTAKHCLEKSSSPSSYKVILGAHEEHRLGEGVQEIDVSKLFKEPSGADIALLKLSSPA 539
            WVLTA HCLEKSS P  YKVILGAHEE+  G  VQEI V+KL  EP+  DIALLKLS PA
Sbjct: 618  WVLTAAHCLEKSSRPEFYKVILGAHEEYIRGSDVQEISVAKLILEPNNRDIALLKLSRPA 677

Query: 540  VITDKVIPACLPTPNYVVADRTACYITGWGETKGTYGAGLLKEARLPVIENKVCNRYEYL 719
             ITDKVIPACLP+PNY+VADRT CYITGWGET+GT+GAG LKEA+LPVIENKVCNR EYL
Sbjct: 678  TITDKVIPACLPSPNYMVADRTICYITGWGETQGTFGAGRLKEAQLPVIENKVCNRVEYL 737

Query: 720  DGKVSSKELCAGHLAGGIDSCQGDSGGPLVCFEKDKYILQGVTSWGLGCALPNKPGVCVR 899
            + +V S ELCAG LAGG+DSCQGDSGGPLVCFEKDKYILQGVTSWGLGCA PNKPGV VR
Sbjct: 738  NNRVKSTELCAGQLAGGVDSCQGDSGGPLVCFEKDKYILQGVTSWGLGCARPNKPGVYVR 797

Query: 900  VSRFVTWIEEIMRRN 944
            VSRFV WIE  MR N
Sbjct: 798  VSRFVDWIEREMRNN 812



 Score = 99.8 bits (247), Expect = 5e-21
 Identities = 40/78 (51%), Positives = 53/78 (67%)
 Frame = +3

Query: 6   AGVPCQEWAAQEPHRHSIFTPGTNPRAGLEKNYCRNPDGDDNGPWCYTTNPQKLFDYCDV 185
           +GV CQ+W A  PH  + ++P T+P  GLE+NYCRNPD D+ GPWCYTT+P K +DYC++
Sbjct: 120 SGVACQKWGATFPHVPN-YSPSTHPNEGLEENYCRNPDNDEQGPWCYTTDPDKRYDYCNI 178

Query: 186 PQCVTSSFDCGKPKVEPK 239
           P+C      C   K E K
Sbjct: 179 PECEEECMYCSGEKYEGK 196



 Score = 86.7 bits (213), Expect = 5e-17
 Identities = 38/64 (59%), Positives = 45/64 (70%)
 Frame = +3

Query: 3   VAGVPCQEWAAQEPHRHSIFTPGTNPRAGLEKNYCRNPDGDDNGPWCYTTNPQKLFDYCD 182
           + G  CQ WAA  PHRHS  TP   P AGLE NYCRNPDGD  GPWCYTT+P   ++YC+
Sbjct: 393 ITGKKCQSWAAMFPHRHSK-TPENFPDAGLEMNYCRNPDGD-KGPWCYTTDPSVRWEYCN 450

Query: 183 VPQC 194
           + +C
Sbjct: 451 LKRC 454



 Score = 82.4 bits (202), Expect = 9e-16
 Identities = 35/68 (51%), Positives = 47/68 (69%)
 Frame = +3

Query: 3   VAGVPCQEWAAQEPHRHSIFTPGTNPRAGLEKNYCRNPDGDDNGPWCYTTNPQKLFDYCD 182
           V+G  CQ W+ Q PHRH+  TP   P   LE+NYCRNPDG+   PWCYTT+ Q  ++YC+
Sbjct: 291 VSGKTCQRWSEQTPHRHNR-TPENFPCKNLEENYCRNPDGE-TAPWCYTTDSQLRWEYCE 348

Query: 183 VPQCVTSS 206
           +P C +S+
Sbjct: 349 IPSCESSA 356



 Score = 82.0 bits (201), Expect = 1e-15
 Identities = 32/66 (48%), Positives = 45/66 (68%)
 Frame = +3

Query: 3   VAGVPCQEWAAQEPHRHSIFTPGTNPRAGLEKNYCRNPDGDDNGPWCYTTNPQKLFDYCD 182
           ++G+ CQ W +Q PH H  + P   P   L+ NYCRNPDG+   PWC+TT+P K ++YCD
Sbjct: 201 MSGLDCQAWDSQSPHAHG-YIPAKFPSKNLKMNYCRNPDGEPR-PWCFTTDPTKRWEYCD 258

Query: 183 VPQCVT 200
           +P+C T
Sbjct: 259 IPRCTT 264


>ref|NP_032269.2| macrophage stimulating 1 (hepatocyte growth factor-like) [Mus
            musculus]
          Length = 716

 Score =  240 bits (612), Expect = 2e-63
 Identities = 134/327 (40%), Positives = 186/327 (56%), Gaps = 17/327 (5%)
 Frame = +3

Query: 9    GVPCQEWAAQEPHRHSIFTPGTNPRAGLEKNYCRNPDGDDNGPWCYTTNPQKLFDYCDVP 188
            GV CQ W+++ PH+   FTP + P+AGLE N+CRNPDGD +GPWCYT +P  LFDYC + 
Sbjct: 397  GVQCQHWSSETPHKPQ-FTPTSAPQAGLEANFCRNPDGDSHGPWCYTLDPDILFDYCALQ 455

Query: 189  QC----VTSSFD---------CGKPKVEPKKCPARVVGGCVSIPHSWPWQISLRYRYRGH 329
            +C      S  D         CGK +V+ K    RVVGG    P + PW +SLR R   H
Sbjct: 456  RCDDDQPPSILDPPDQVVFEKCGK-RVD-KSNKLRVVGG---HPGNSPWTVSLRNRQGQH 510

Query: 330  FCGGTLISPEWVLTAKHCLEKSSSP-SSYKVILGA-HEEHRLGE-GVQEIDVSKLFKEPS 500
            FCGG+L+  +WVLTA+ C+     P + Y+V LG  ++  + GE  +Q + V+K    P+
Sbjct: 511  FCGGSLVKEQWVLTARQCIWSCHEPLTGYEVWLGTINQNPQPGEANLQRVPVAKAVCGPA 570

Query: 501  GADIALLKLSSPAVITDKVIPACLPTPNYVVADRTACYITGWGETKGTYGAGLLKEARLP 680
            G+ + LLKL  P ++   V   CLP   YVV   T C I GWGE+ GT    +L  A + 
Sbjct: 571  GSQLVLLKLERPVILNHHVALICLPPEQYVVPPGTKCEIAGWGESIGTSNNTVLHVASMN 630

Query: 681  VIENKVCN-RYEYLDGKVSSKELCAGHLAGGIDSCQGDSGGPLVCFEKDKYILQGVTSWG 857
            VI N+ CN +Y    G +   E+C   +   + +C+GD GGPL C+  D ++LQG+    
Sbjct: 631  VISNQECNTKYR---GHIQESEICPQGMVVPVGACEGDYGGPLACYTHDCWVLQGLIIPN 687

Query: 858  LGCALPNKPGVCVRVSRFVTWIEEIMR 938
              CA P  P +  RV  FV WI ++M+
Sbjct: 688  RVCARPRWPAIFTRVFVFVDWINKVMQ 714



 Score = 77.0 bits (188), Expect = 4e-14
 Identities = 32/62 (51%), Positives = 41/62 (66%)
 Frame = +3

Query: 9   GVPCQEWAAQEPHRHSIFTPGTNPRAGLEKNYCRNPDGDDNGPWCYTTNPQKLFDYCDVP 188
           G+PCQ W+ + P+ H  +TP   P+ GLE+N+CRNPDGD  GPWCYTTN    F  C + 
Sbjct: 128 GLPCQAWSRRFPNDHK-YTP--TPKNGLEENFCRNPDGDPRGPWCYTTNRSVRFQSCGIK 184

Query: 189 QC 194
            C
Sbjct: 185 TC 186



 Score = 68.2 bits (165), Expect = 2e-11
 Identities = 30/63 (47%), Positives = 37/63 (58%)
 Frame = +3

Query: 6   AGVPCQEWAAQEPHRHSIFTPGTNPRAGLEKNYCRNPDGDDNGPWCYTTNPQKLFDYCDV 185
           +G  CQ W  Q PH H  F P       L+ NYCRNPDG +  PWCYTT+P    ++CD+
Sbjct: 208 SGRECQRWDLQHPHSHP-FQPEKFLDKDLKDNYCRNPDGSER-PWCYTTDPNVEREFCDL 265

Query: 186 PQC 194
           P C
Sbjct: 266 PSC 268



 Score = 67.8 bits (164), Expect = 2e-11
 Identities = 30/64 (46%), Positives = 39/64 (60%), Gaps = 1/64 (1%)
 Frame = +3

Query: 6   AGVPCQEWAAQEPHRHSIFTPGTNPRAGLEKNYCRNPDGDDNGPWCYTTNPQKLFDYC-D 182
           AGVPCQ W AQ PH+H  F P       L +N+CRNPDG +  PWC+T+ P     +C  
Sbjct: 309 AGVPCQRWDAQSPHQHR-FVPEKYACKDLRENFCRNPDGSE-APWCFTSRPGLRMAFCHQ 366

Query: 183 VPQC 194
           +P+C
Sbjct: 367 IPRC 370


>ref|NP_034557.2| hepatocyte growth factor [Mus musculus]
          Length = 728

 Score =  208 bits (530), Expect = 8e-54
 Identities = 115/326 (35%), Positives = 176/326 (53%), Gaps = 16/326 (4%)
 Frame = +3

Query: 6    AGVPCQEWAA--QEPHRHSIFTPGTNPRAGLEKNYCRNPDGDDNGPWCYTTNPQKLFDYC 179
            +G+ C  W    ++ HRH  + P  +    L KNYCRNPD D +GPWCYT NP   +DYC
Sbjct: 409  SGLTCSMWDKNMEDLHRHIFWEPDASK---LNKNYCRNPDDDAHGPWCYTGNPLIPWDYC 465

Query: 180  DVPQCVTSS-----------FDCGKPKVEPKKCPARVVGGCVSIPHSWPWQISLRYRYRG 326
             + +C   +             C K K        RVV G +    +  W +SL+YR + 
Sbjct: 466  PISRCEGDTTPTIVNLDHPVISCAKTK------QLRVVNG-IPTQTTVGWMVSLKYRNK- 517

Query: 327  HFCGGTLISPEWVLTAKHCLE-KSSSPSSYKVILGAHEEHRLGEGVQE--IDVSKLFKEP 497
            H CGG+LI   WV+TA+ C   ++     Y+  LG H+ H  GE  ++  +++S+L   P
Sbjct: 518  HICGGSLIKESWVITARQCFPARNKDLKDYEAWLGIHDVHERGEEKRKQILNISQLVYGP 577

Query: 498  SGADIALLKLSSPAVITDKVIPACLPTPNYVVADRTACYITGWGETKGTYGAGLLKEARL 677
             G+D+ LLKL+ PA++ + V    LP+    + ++T C I GWG T      GLL+ A L
Sbjct: 578  EGSDLVLLKLARPAILDNFVSTIDLPSYGCTIPEKTTCSIYGWGYTGLINADGLLRVAHL 637

Query: 678  PVIENKVCNRYEYLDGKVSSKELCAGHLAGGIDSCQGDSGGPLVCFEKDKYILQGVTSWG 857
             ++ N+ C+++      ++  ELCAG    G   C+GD GGPL+C +    ++ GV   G
Sbjct: 638  YIMGNEKCSQHHQGKVTLNESELCAGAEKIGSGPCEGDYGGPLICEQHKMRMVLGVIVPG 697

Query: 858  LGCALPNKPGVCVRVSRFVTWIEEIM 935
             GCA+PN+P + VRV+ +  WI +++
Sbjct: 698  RGCAIPNRPVIFVRVAYYAKWIHKVI 723



 Score = 82.0 bits (201), Expect = 1e-15
 Identities = 32/70 (45%), Positives = 47/70 (67%)
 Frame = +3

Query: 6   AGVPCQEWAAQEPHRHSIFTPGTNPRAGLEKNYCRNPDGDDNGPWCYTTNPQKLFDYCDV 185
           +G+ CQ W +  PH HS F P +     L++NYCRNP G++ GPWC+T+NP+  ++ CD+
Sbjct: 146 SGIKCQPWNSMIPHEHS-FLPSSYRGKDLQENYCRNPRGEEGGPWCFTSNPEVRYEVCDI 204

Query: 186 PQCVTSSFDC 215
           PQC  S  +C
Sbjct: 205 PQC--SEVEC 212



 Score = 74.3 bits (181), Expect = 2e-13
 Identities = 35/71 (49%), Positives = 46/71 (64%), Gaps = 2/71 (2%)
 Frame = +3

Query: 9   GVPCQEWAAQEPHRHSIFTPGTNPRAGLEKNYCRNPDGDDNGPWCYTTNPQKLFDYC-DV 185
           G+PCQ W +Q PH+H I TP       L +NYCRNPDG ++ PWC+TT+P     YC  +
Sbjct: 324 GIPCQRWDSQYPHKHDI-TPENFKCKDLRENYCRNPDGAES-PWCFTTDPNIRVGYCSQI 381

Query: 186 PQC-VTSSFDC 215
           P+C V+S  DC
Sbjct: 382 PKCDVSSGQDC 392



 Score = 73.9 bits (180), Expect = 3e-13
 Identities = 33/80 (41%), Positives = 43/80 (53%)
 Frame = +3

Query: 6   AGVPCQEWAAQEPHRHSIFTPGTNPRAGLEKNYCRNPDGDDNGPWCYTTNPQKLFDYCDV 185
           +G  CQ W  Q PHRH  F P   P  G + NYCRNPDG    PWCYT +P   ++YC +
Sbjct: 229 SGKTCQRWDQQTPHRHK-FLPERYPDKGFDDNYCRNPDGKPR-PWCYTLDPDTTWEYCAI 286

Query: 186 PQCVTSSFDCGKPKVEPKKC 245
             C  S+ +     +E  +C
Sbjct: 287 KTCAHSAVNETDVPMETTEC 306


>ref|NP_032307.1| hepsin [Mus musculus]
          Length = 416

 Score =  196 bits (497), Expect = 5e-50
 Identities = 127/333 (38%), Positives = 174/333 (52%), Gaps = 26/333 (7%)
 Frame = +3

Query: 3    VAGVPCQEWAAQEPHRHS---IFTPGTNPRAGLEKNYCRNPDGDDNGPWCYTTNPQKLFD 173
            VAG+ C+E        HS   + T G N  +G    +C +  G            Q+L D
Sbjct: 84   VAGLGCEEMGFLRALAHSELDVRTAGANGTSGF---FCVDEGG--------LPLAQRLLD 132

Query: 174  YCDVPQCVTSSF------DCGKPKVEPKKCPARVVGGCVSIPHSWPWQISLRYRYRGHFC 335
               V  C    F      DCG+ K+       R+VGG  S    WPWQ+SLRY    H C
Sbjct: 133  VISVCDCPRGRFLTATCQDCGRRKLPVD----RIVGGQDSSLGRWPWQVSLRYDGT-HLC 187

Query: 336  GGTLISPEWVLTAKHCL-EKSSSPSSYKVILGA---HEEHRLGEGVQEIDVSK---LFKE 494
            GG+L+S +WVLTA HC  E++   S ++V  GA      H +  GVQ +        F++
Sbjct: 188  GGSLLSGDWVLTAAHCFPERNRVLSRWRVFAGAVARTSPHAVQLGVQAVIYHGGYLPFRD 247

Query: 495  PS----GADIALLKLSSPAVITDKVIPACLPTPNYVVADRTACYITGWGETKGTYG--AG 656
            P+      DIAL+ LSS   +T+ + P CLP     + D   C +TGWG T+  YG  A 
Sbjct: 248  PTIDENSNDIALVHLSSSLPLTEYIQPVCLPAAGQALVDGKVCTVTGWGNTQ-FYGQQAM 306

Query: 657  LLKEARLPVIENKVCNRYEYLDGKVSSKELCAGHLAGGIDSCQGDSGGPLVCFEK----D 824
            +L+EAR+P+I N+VCN  ++   ++  K  CAG+  GGID+CQGDSGGP VC +      
Sbjct: 307  VLQEARVPIISNEVCNSPDFYGNQIKPKMFCAGYPEGGIDACQGDSGGPFVCEDSISGTS 366

Query: 825  KYILQGVTSWGLGCALPNKPGVCVRVSRFVTWI 923
            ++ L G+ SWG GCAL  KPGV  +V+ F  WI
Sbjct: 367  RWRLCGIVSWGTGCALARKPGVYTKVTDFREWI 399


>ref|NP_542765.1| transmembrane protease, serine 3 [Mus musculus]
          Length = 453

 Score =  191 bits (484), Expect = 2e-48
 Identities = 101/238 (42%), Positives = 142/238 (59%), Gaps = 7/238 (2%)
 Frame = +3

Query: 252 RVVGGCVSIPHSWPWQISLRYRYRGHFCGGTLISPEWVLTAKHCLEKSSSPSSYKVILG- 428
           R+VGG +S    WPWQ+SL+++   H CGG++I+P W++TA HC+     P S+ V +G 
Sbjct: 216 RIVGGNMSSLTQWPWQVSLQFQGY-HLCGGSIITPLWIVTAAHCVYDLYHPKSWTVQVGL 274

Query: 429 -----AHEEHRLGEGVQEIDVSKLFKEPSGADIALLKLSSPAVITDKVIPACLPTPNYVV 593
                +     L E +  I  SK   +  G DIAL+KLS P    + + P CLP      
Sbjct: 275 VSLMDSPVPSHLVEKI--IYHSKYKPKRLGNDIALMKLSEPLTFDETIQPICLPNSEENF 332

Query: 594 ADRTACYITGWGETK-GTYGAGLLKEARLPVIENKVCNRYEYLDGKVSSKELCAGHLAGG 770
            D   C+ +GWG T+ G   + +L  A +P+I NK+CN  +   G +S   LCAG+L GG
Sbjct: 333 PDGKLCWTSGWGATEDGGDASPVLNHAAVPLISNKICNHRDVYGGIISPSMLCAGYLKGG 392

Query: 771 IDSCQGDSGGPLVCFEKDKYILQGVTSWGLGCALPNKPGVCVRVSRFVTWIEEIMRRN 944
           +DSCQGDSGGPLVC E+  + L G TS+G+GCA  NKPGV  R++ F+ WI E + R+
Sbjct: 393 VDSCQGDSGGPLVCQERRLWKLVGATSFGIGCAEVNKPGVYTRITSFLDWIHEQLERD 450


>ref|NP_038949.2| transmembrane protease, serine 8 (intestinal) [Mus musculus]
          Length = 310

 Score =  187 bits (475), Expect = 2e-47
 Identities = 99/248 (39%), Positives = 141/248 (56%), Gaps = 14/248 (5%)
 Frame = +3

Query: 252 RVVGGCVSIPHSWPWQISLRYRYRGHFCGGTLISPEWVLTAKHCLEKSSSPSSYKVILGA 431
           ++VGG  ++   WPWQ+SL     GH CGG+LI   WVLTA HC  +S +PS Y V +G 
Sbjct: 36  KIVGGQDALEGQWPWQVSLWITEDGHICGGSLIHEVWVLTAAHCFRRSLNPSFYHVKVGG 95

Query: 432 H-----EEHRLGEGVQEIDV--SKLFKEPSGADIALLKLSSPAVITDKVIPACLPTPNYV 590
                 E H     V+ I V  + L+ + S  DIAL++L +P +   +  P CLP     
Sbjct: 96  LTLSLLEPHSTLVAVRNIFVHPTYLWADASSGDIALVQLDTP-LRPSQFTPVCLPAAQTP 154

Query: 591 VADRTACYITGWGETKGTYGAGLLKEARLPVIENKVCNRYEYLDGK-------VSSKELC 749
           +   T C++TGWG T+    A +L+E  +P+++++ C +  +  G        + S  LC
Sbjct: 155 LTPGTVCWVTGWGATQERDMASVLQELAVPLLDSEDCEKMYHTQGSSLSGERIIQSDMLC 214

Query: 750 AGHLAGGIDSCQGDSGGPLVCFEKDKYILQGVTSWGLGCALPNKPGVCVRVSRFVTWIEE 929
           AG++ G  DSCQGDSGGPLVC     +   G+TSWG+GCA P +PGV  RV  +V WI+ 
Sbjct: 215 AGYVEGQKDSCQGDSGGPLVCSINSSWTQVGITSWGIGCARPYRPGVYTRVPTYVDWIQR 274

Query: 930 IMRRN*SD 953
           I+  N SD
Sbjct: 275 ILAENHSD 282


>ref|XP_926294.1| PREDICTED: similar to protease, serine, 33 isoform 5 [Mus musculus]
          Length = 293

 Score =  184 bits (466), Expect = 2e-46
 Identities = 98/256 (38%), Positives = 143/256 (55%), Gaps = 18/256 (7%)
 Frame = +3

Query: 213 CGKPKVEPKKCPARVVGGCVSIPHSWPWQISLRYRYRGHFCGGTLISPEWVLTAKHCLEK 392
           CG+P++      +R+VGG  +    WPWQ S+++R   H CGG+LI+P+WVLTA HC  +
Sbjct: 41  CGQPRMS-----SRIVGGRDAQDGEWPWQTSIQHR-GAHVCGGSLIAPQWVLTAGHCFPR 94

Query: 393 SSSPSSYKVILGA-----HEEHRLGEGVQEIDVSKLFKEPSG-ADIALLKLSSPAVITDK 554
              PS Y V+LGA        H L   V  + +   + E     D+ALL+L  P  ++ +
Sbjct: 95  RVWPSEYSVLLGALSLDVRSSHELLVPVLRVLLPPDYSEDEARGDLALLQLRHPVSLSTR 154

Query: 555 VIPACLPTPNYVVADRTACYITGWGETKGTYGAGL-----LKEARLPVIENKVCNRYEYL 719
           + P CLP P       + C++TGWG      G  L     L+  R+P+++++ C+R  ++
Sbjct: 155 IQPVCLPAPGSHPPPGSPCWVTGWGSLSP--GVPLPKGRPLQGVRVPLLDSRACDRLYHV 212

Query: 720 DGKVSSKE-------LCAGHLAGGIDSCQGDSGGPLVCFEKDKYILQGVTSWGLGCALPN 878
              V   E       LCAG+  G  D+CQGDSGGPL C E   ++L GV SWG GCALPN
Sbjct: 213 GANVPQGERIVLPGNLCAGYRRGHKDACQGDSGGPLTCMESGHWVLVGVVSWGKGCALPN 272

Query: 879 KPGVCVRVSRFVTWIE 926
           +PGV   V+++  WI+
Sbjct: 273 RPGVYTNVAKYSPWIQ 288


>ref|XP_926285.1| PREDICTED: similar to protease, serine, 33 isoform 4 [Mus musculus]
          Length = 259

 Score =  184 bits (466), Expect = 2e-46
 Identities = 98/256 (38%), Positives = 143/256 (55%), Gaps = 18/256 (7%)
 Frame = +3

Query: 213 CGKPKVEPKKCPARVVGGCVSIPHSWPWQISLRYRYRGHFCGGTLISPEWVLTAKHCLEK 392
           CG+P++      +R+VGG  +    WPWQ S+++R   H CGG+LI+P+WVLTA HC  +
Sbjct: 7   CGQPRMS-----SRIVGGRDAQDGEWPWQTSIQHR-GAHVCGGSLIAPQWVLTAGHCFPR 60

Query: 393 SSSPSSYKVILGA-----HEEHRLGEGVQEIDVSKLFKEPSG-ADIALLKLSSPAVITDK 554
              PS Y V+LGA        H L   V  + +   + E     D+ALL+L  P  ++ +
Sbjct: 61  RVWPSEYSVLLGALSLDVRSSHELLVPVLRVLLPPDYSEDEARGDLALLQLRHPVSLSTR 120

Query: 555 VIPACLPTPNYVVADRTACYITGWGETKGTYGAGL-----LKEARLPVIENKVCNRYEYL 719
           + P CLP P       + C++TGWG      G  L     L+  R+P+++++ C+R  ++
Sbjct: 121 IQPVCLPAPGSHPPPGSPCWVTGWGSLSP--GVPLPKGRPLQGVRVPLLDSRACDRLYHV 178

Query: 720 DGKVSSKE-------LCAGHLAGGIDSCQGDSGGPLVCFEKDKYILQGVTSWGLGCALPN 878
              V   E       LCAG+  G  D+CQGDSGGPL C E   ++L GV SWG GCALPN
Sbjct: 179 GANVPQGERIVLPGNLCAGYRRGHKDACQGDSGGPLTCMESGHWVLVGVVSWGKGCALPN 238

Query: 879 KPGVCVRVSRFVTWIE 926
           +PGV   V+++  WI+
Sbjct: 239 RPGVYTNVAKYSPWIQ 254


>ref|XP_914273.1| PREDICTED: similar to protease, serine, 33 isoform 3 [Mus musculus]
          Length = 277

 Score =  184 bits (466), Expect = 2e-46
 Identities = 98/256 (38%), Positives = 143/256 (55%), Gaps = 18/256 (7%)
 Frame = +3

Query: 213 CGKPKVEPKKCPARVVGGCVSIPHSWPWQISLRYRYRGHFCGGTLISPEWVLTAKHCLEK 392
           CG+P++      +R+VGG  +    WPWQ S+++R   H CGG+LI+P+WVLTA HC  +
Sbjct: 25  CGQPRMS-----SRIVGGRDAQDGEWPWQTSIQHR-GAHVCGGSLIAPQWVLTAGHCFPR 78

Query: 393 SSSPSSYKVILGA-----HEEHRLGEGVQEIDVSKLFKEPSG-ADIALLKLSSPAVITDK 554
              PS Y V+LGA        H L   V  + +   + E     D+ALL+L  P  ++ +
Sbjct: 79  RVWPSEYSVLLGALSLDVRSSHELLVPVLRVLLPPDYSEDEARGDLALLQLRHPVSLSTR 138

Query: 555 VIPACLPTPNYVVADRTACYITGWGETKGTYGAGL-----LKEARLPVIENKVCNRYEYL 719
           + P CLP P       + C++TGWG      G  L     L+  R+P+++++ C+R  ++
Sbjct: 139 IQPVCLPAPGSHPPPGSPCWVTGWGSLSP--GVPLPKGRPLQGVRVPLLDSRACDRLYHV 196

Query: 720 DGKVSSKE-------LCAGHLAGGIDSCQGDSGGPLVCFEKDKYILQGVTSWGLGCALPN 878
              V   E       LCAG+  G  D+CQGDSGGPL C E   ++L GV SWG GCALPN
Sbjct: 197 GANVPQGERIVLPGNLCAGYRRGHKDACQGDSGGPLTCMESGHWVLVGVVSWGKGCALPN 256

Query: 879 KPGVCVRVSRFVTWIE 926
           +PGV   V+++  WI+
Sbjct: 257 RPGVYTNVAKYSPWIQ 272


>ref|XP_983154.1| PREDICTED: protease, serine, 33 isoform 3 [Mus musculus]
          Length = 310

 Score =  184 bits (466), Expect = 2e-46
 Identities = 98/256 (38%), Positives = 143/256 (55%), Gaps = 18/256 (7%)
 Frame = +3

Query: 213 CGKPKVEPKKCPARVVGGCVSIPHSWPWQISLRYRYRGHFCGGTLISPEWVLTAKHCLEK 392
           CG+P++      +R+VGG  +    WPWQ S+++R   H CGG+LI+P+WVLTA HC  +
Sbjct: 58  CGQPRMS-----SRIVGGRDAQDGEWPWQTSIQHR-GAHVCGGSLIAPQWVLTAGHCFPR 111

Query: 393 SSSPSSYKVILGA-----HEEHRLGEGVQEIDVSKLFKEPSG-ADIALLKLSSPAVITDK 554
              PS Y V+LGA        H L   V  + +   + E     D+ALL+L  P  ++ +
Sbjct: 112 RVWPSEYSVLLGALSLDVRSSHELLVPVLRVLLPPDYSEDEARGDLALLQLRHPVSLSTR 171

Query: 555 VIPACLPTPNYVVADRTACYITGWGETKGTYGAGL-----LKEARLPVIENKVCNRYEYL 719
           + P CLP P       + C++TGWG      G  L     L+  R+P+++++ C+R  ++
Sbjct: 172 IQPVCLPAPGSHPPPGSPCWVTGWGSLSP--GVPLPKGRPLQGVRVPLLDSRACDRLYHV 229

Query: 720 DGKVSSKE-------LCAGHLAGGIDSCQGDSGGPLVCFEKDKYILQGVTSWGLGCALPN 878
              V   E       LCAG+  G  D+CQGDSGGPL C E   ++L GV SWG GCALPN
Sbjct: 230 GANVPQGERIVLPGNLCAGYRRGHKDACQGDSGGPLTCMESGHWVLVGVVSWGKGCALPN 289

Query: 879 KPGVCVRVSRFVTWIE 926
           +PGV   V+++  WI+
Sbjct: 290 RPGVYTNVAKYSPWIQ 305


  Database: RefSeqMP
    Posted date:  Aug 2, 2006 12:58 AM
  Number of letters in database: 21,768,885
  Number of sequences in database:  45,328
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 63,410,024
Number of Sequences: 45328
Number of extensions: 1779243
Number of successful extensions: 6396
Number of sequences better than 1.0e-05: 10
Number of HSP's better than  0.0 without gapping: 4782
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5637
length of database: 21,768,885
effective HSP length: 106
effective length of database: 16,964,117
effective search space used: 5038342749
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)