Search to RefSeqBP
BLASTX 2.2.10 [Oct-19-2004]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= LVRM1_0151_G04
(2212 letters)
Database: RefSeqBP
33,508 sequences; 16,112,626 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_604169.2| PREDICTED: similar to malic enzyme 3, NADP(+)-d... 722 0.0
Alignment gi|XP_613987.2| PREDICTED: similar to NADP-dependent malic enzy... 610 e-174
Alignment gi|XP_584500.2| PREDICTED: similar to NAD-dependent malic enzym... 504 e-142
Alignment gi|XP_875137.1| PREDICTED: similar to NAD-dependent malic enzym... 163 6e-40
Alignment gi|XP_596455.2| PREDICTED: similar to NADP-dependent malic enzy... 162 1e-39
>ref|XP_604169.2| PREDICTED: similar to malic enzyme 3, NADP(+)-dependent,
mitochondrial [Bos taurus]
Length = 564
Score = 722 bits (1863), Expect = 0.0
Identities = 353/498 (70%), Positives = 425/498 (85%)
Frame = +3
Query: 219 LAFTLEERQQLNIHGLLPPCFISQDIQVLRVIKNFERLNSDFDRYLLLMDLQDRNEKLFY 398
+AFTLEER QL IHGL+PPCF+SQD+Q+LRV++ +ER SD D+Y++LM LQDRNEKLFY
Sbjct: 1 MAFTLEERLQLGIHGLIPPCFLSQDVQLLRVMRYYERQQSDLDKYIILMTLQDRNEKLFY 60
Query: 399 KVLMSDIEKFMPIVYTPTVGLACQQYSLAFRKPRGLFISIHDRGHVASVLNAWPEDVIKA 578
+VL SD+EKF+PIVYTPTVGLACQ Y L FR+PRGLFI++HD+GH+A++LN+WPED IKA
Sbjct: 61 RVLTSDVEKFLPIVYTPTVGLACQHYGLTFRRPRGLFITVHDKGHLATMLNSWPEDDIKA 120
Query: 579 VVVTDGERILGLGDLGCNGMGIPVGKLALYTACGGVNPQECLPVILDVGTENEELLKDPL 758
VVVTDGERILGLGDLGC GMGIPVGKLALYTACGGVNP++CLPV+LDVGT NEELL+DPL
Sbjct: 121 VVVTDGERILGLGDLGCYGMGIPVGKLALYTACGGVNPRQCLPVLLDVGTNNEELLRDPL 180
Query: 759 YIGLRQRRVRGPEYDDFLDEFMEAVSSKYGMNCLIQFEDFANINAFRLLKKYQNQYCTFN 938
YIGL+ RRVRG EYDD LDEFM+AV+ K+G+NCLIQFEDFAN NAFRLL KY+N+YC FN
Sbjct: 181 YIGLKHRRVRGQEYDDLLDEFMQAVTDKFGINCLIQFEDFANANAFRLLNKYRNKYCMFN 240
Query: 939 DDIQGTASVAVAGILAALRITKNKLSDQTILFQGAGEAALGIAHLIVMAMEKEGVPKEKA 1118
DDIQGTASVAVAGILAALRITKNKLS+ +FQGAGEAA+GIAHL+VMA+EKEG+ ++
Sbjct: 241 DDIQGTASVAVAGILAALRITKNKLSNHVFVFQGAGEAAMGIAHLLVMALEKEGISRQ-- 298
Query: 1119 IKKIWLVDSKGLIVKGRAALTNXXXXXXXXXXXMKNLEAIVQDIKPTALIGVAAIGGAFS 1298
+ W+ L ++GR+ L + + +LE +V+ +KPTA+IGVAAI GAF+
Sbjct: 299 --EYWMF---FLSLQGRSHLNHEKEMFAQDHPEVNSLEEVVRLVKPTAIIGVAAIAGAFT 353
Query: 1299 EQILKDMAAFNERPIIFALSNPTSKAECTAEQCYTLTQGRAIFASGSPFDPVTLPSGQTL 1478
EQIL+DMA+F+E PIIFALSNPTSKAECTAE+CY +T+GR IFASGSPF VTL G+T
Sbjct: 354 EQILRDMASFHEHPIIFALSNPTSKAECTAEKCYRVTEGRGIFASGSPFPSVTLEDGRTF 413
Query: 1479 YPGQGNNSYVFPGVALGVVACGLRHITDKILLTTAEVIAQQVSDKHLEEGRLYPPLNTIR 1658
+PGQGNN+YVFPGVALGV+A G+RHI D+I L TAE IAQ+VS+ HL +GRLYPPL+TIR
Sbjct: 414 FPGQGNNAYVFPGVALGVIAGGIRHIPDEIFLLTAEQIAQEVSEHHLSQGRLYPPLSTIR 473
Query: 1659 DVSLKIAEKIVRDAYQEK 1712
DVSL+IA K VRD+ K
Sbjct: 474 DVSLRIAIK-VRDSSPPK 490
>ref|XP_613987.2| PREDICTED: similar to NADP-dependent malic enzyme (NADP-ME) (Malic
enzyme 1) [Bos taurus]
Length = 472
Score = 610 bits (1573), Expect = e-174
Identities = 307/343 (89%), Positives = 322/343 (93%)
Frame = +3
Query: 822 MEAVSSKYGMNCLIQFEDFANINAFRLLKKYQNQYCTFNDDIQGTASVAVAGILAALRIT 1001
+ +S +YGMNCLIQFEDFANINAFRLL+KYQNQYCTFNDDIQGTASVAVAGILAALRIT
Sbjct: 130 VNVLSHRYGMNCLIQFEDFANINAFRLLRKYQNQYCTFNDDIQGTASVAVAGILAALRIT 189
Query: 1002 KNKLSDQTILFQGAGEAALGIAHLIVMAMEKEGVPKEKAIKKIWLVDSKGLIVKGRAALT 1181
KNKLSDQT+LFQGAGEAALGIAHLIVMAMEKEG+ KE+AI+KIWLVDSKGLIVKGRAALT
Sbjct: 190 KNKLSDQTVLFQGAGEAALGIAHLIVMAMEKEGLSKEQAIEKIWLVDSKGLIVKGRAALT 249
Query: 1182 NXXXXXXXXXXXMKNLEAIVQDIKPTALIGVAAIGGAFSEQILKDMAAFNERPIIFALSN 1361
MKNLEAIVQDIKPTALIGVAAIGGAFSEQI+KDMAAFNERPIIFALSN
Sbjct: 250 QEKEEFAHEHKEMKNLEAIVQDIKPTALIGVAAIGGAFSEQIIKDMAAFNERPIIFALSN 309
Query: 1362 PTSKAECTAEQCYTLTQGRAIFASGSPFDPVTLPSGQTLYPGQGNNSYVFPGVALGVVAC 1541
PTSKAECTAEQCY LT+GRAIFASGSPFDPVTLPSG+TLYPGQGNNSYVFPGVALGVVAC
Sbjct: 310 PTSKAECTAEQCYKLTKGRAIFASGSPFDPVTLPSGKTLYPGQGNNSYVFPGVALGVVAC 369
Query: 1542 GLRHITDKILLTTAEVIAQQVSDKHLEEGRLYPPLNTIRDVSLKIAEKIVRDAYQEKTAT 1721
GLRHITDKI LTTAEVIAQQVSDKHLEEGRLYPPL+TIRDVSLKIAEKIV+DAYQEKTAT
Sbjct: 370 GLRHITDKIFLTTAEVIAQQVSDKHLEEGRLYPPLDTIRDVSLKIAEKIVKDAYQEKTAT 429
Query: 1722 IYPEPSNKEAFVRSQMYSTDYDQILPDGYSWPEEAQKIQTKLD 1850
+YPEP NKEAFVRSQMYSTDYDQILPD Y WP+EAQKIQTKLD
Sbjct: 430 VYPEPPNKEAFVRSQMYSTDYDQILPDCYPWPKEAQKIQTKLD 472
Score = 189 bits (481), Expect = 6e-48
Identities = 95/109 (87%), Positives = 100/109 (91%), Gaps = 8/109 (7%)
Frame = +3
Query: 216 DLAFTLEERQQLNIHGLLPPCFISQDIQVLRVIKNFERLNSDFDRYLLLMDLQDRNEKLF 395
DLAFTLEERQQLNIHGLLPP FISQD+QVLRV+KNFERLNSDFDRYLLLMDLQDRNEKLF
Sbjct: 14 DLAFTLEERQQLNIHGLLPPSFISQDVQVLRVLKNFERLNSDFDRYLLLMDLQDRNEKLF 73
Query: 396 YKVLMSDIEKFMPIVYTPTVGLACQQYSLAFRKPR--------GLFISI 518
YKVLMSDIEKFMPIVYTPTVGLACQQYSLAFRKPR GLF+++
Sbjct: 74 YKVLMSDIEKFMPIVYTPTVGLACQQYSLAFRKPRFNVLVTSYGLFLNV 122
>ref|XP_584500.2| PREDICTED: similar to NAD-dependent malic enzyme, mitochondrial
precursor (NAD-ME) (Malic enzyme 2), partial [Bos taurus]
Length = 513
Score = 504 bits (1297), Expect = e-142
Identities = 249/424 (58%), Positives = 310/424 (73%), Gaps = 3/424 (0%)
Frame = +3
Query: 150 APRRRHTLQRGYAVTRIPHLNKDLAFTLEERQQLNIHGLLPPCFISQDIQVLRVIKNFER 329
A R HT ++G + P NK +AFTL+ERQ L + GLLPP +QDIQ LR +N ++
Sbjct: 90 ACRHLHTKEKGKPLMLNPRTNKGMAFTLQERQMLGLQGLLPPKIETQDIQALRFHRNLKK 149
Query: 330 LNSDFDRYLLLMDLQDRNEKLFYKVLMSDIEKFMPIVYTPTVGLACQQYSLAFRKPRGLF 509
LN ++Y+ +M +Q+RNEKLFY++L DIE MPIVYTPTVGLAC QY FR+P+GLF
Sbjct: 150 LNGPLEKYIYIMGIQERNEKLFYRILQDDIETLMPIVYTPTVGLACSQYGHIFRRPKGLF 209
Query: 510 ISIHDRGHVASVLNAWPEDVIKAVVVTDGERILGLGDLGCNGMGIPVGKLALYTACGGVN 689
ISI DRGHV S+++ WPE+ +KAVVVTDGERILGLGDLG GMGIPVGKL LYTAC G+
Sbjct: 210 ISISDRGHVRSIVDNWPENHVKAVVVTDGERILGLGDLGVYGMGIPVGKLCLYTACAGIR 269
Query: 690 PQECLPVILDVGTENEELLKDPLYIGLRQRRVRGPEYDDFLDEFMEAVSSKYGMNCLIQF 869
P CLPV +DVGT+N LLKDP Y+GL Q+R R YDD +DEFM+A++ +YG N LIQF
Sbjct: 270 PDRCLPVCIDVGTDNPALLKDPFYMGLYQKRDRSQRYDDLIDEFMKAITDRYGQNTLIQF 329
Query: 870 EDFANINAFRLLKKYQNQYCTFNDDIQGTASVAVAGILAALRITKNKLSDQTILFQGAGE 1049
EDF N NAFR L+KY+ +YCTFNDDIQGTA+VA+AG+LAA ++ +SD ILF GAGE
Sbjct: 330 EDFGNHNAFRFLRKYREKYCTFNDDIQGTAAVALAGLLAAQKVIGKPISDHRILFLGAGE 389
Query: 1050 AALGIAHLIVMAMEKEGVPKEKAIKKIWLVDSKGLIVKGRAALTNX---XXXXXXXXXXM 1220
AALGIA+LIVMAM + G+ +E+A KKIW+VD GL+ KGR A
Sbjct: 390 AALGIANLIVMAMVENGLSEEEARKKIWMVDKFGLLFKGRKAKIESHQEAFAHSAPESLP 449
Query: 1221 KNLEAIVQDIKPTALIGVAAIGGAFSEQILKDMAAFNERPIIFALSNPTSKAECTAEQCY 1400
E V +KP+A+IGVA G F+ ++K MA NERPIIFALSNPT++AECTAE+ Y
Sbjct: 450 DTFEEAVNILKPSAIIGVAGAGRLFTPGVIKAMAEINERPIIFALSNPTAQAECTAEEAY 509
Query: 1401 TLTQ 1412
TLT+
Sbjct: 510 TLTE 513
>ref|XP_875137.1| PREDICTED: similar to NAD-dependent malic enzyme, mitochondrial
precursor (NAD-ME) (Malic enzyme 2), partial [Bos taurus]
Length = 152
Score = 163 bits (412), Expect = 6e-40
Identities = 72/139 (51%), Positives = 97/139 (69%)
Frame = +3
Query: 1410 QGRAIFASGSPFDPVTLPSGQTLYPGQGNNSYVFPGVALGVVACGLRHITDKILLTTAEV 1589
QGR +FASGSPF+PV L GQ PGQGNN Y+FPGVAL V+ C RHI+D + L A+
Sbjct: 6 QGRCLFASGSPFEPVKLSDGQVFTPGQGNNVYIFPGVALAVILCNTRHISDHVFLEAAKA 65
Query: 1590 IAQQVSDKHLEEGRLYPPLNTIRDVSLKIAEKIVRDAYQEKTATIYPEPSNKEAFVRSQM 1769
+ Q++DK L +GRLYPPL+ I++VS+ IA K+ Y K A YPEP +K ++R ++
Sbjct: 66 LTSQLTDKELAQGRLYPPLSNIQEVSINIAIKVTEYLYANKMAFRYPEPEDKAKYIRERI 125
Query: 1770 YSTDYDQILPDGYSWPEEA 1826
+ ++YD +LPD Y WPE A
Sbjct: 126 WRSEYDSLLPDVYEWPEAA 144
>ref|XP_596455.2| PREDICTED: similar to NADP-dependent malic enzyme (NADP-ME) (Malic
enzyme 1) [Bos taurus]
Length = 157
Score = 162 bits (410), Expect = 1e-39
Identities = 74/80 (92%), Positives = 80/80 (100%)
Frame = +3
Query: 498 RGLFISIHDRGHVASVLNAWPEDVIKAVVVTDGERILGLGDLGCNGMGIPVGKLALYTAC 677
RGLFISIHDRGH++SVLNAWPEDVIKA+VVTDGERILGLGDLGCNGMGIPVGKLALYTAC
Sbjct: 72 RGLFISIHDRGHISSVLNAWPEDVIKAIVVTDGERILGLGDLGCNGMGIPVGKLALYTAC 131
Query: 678 GGVNPQECLPVILDVGTENE 737
GG+NPQ+CLPV+LDVGTENE
Sbjct: 132 GGMNPQQCLPVMLDVGTENE 151
Database: RefSeqBP
Posted date: Aug 1, 2006 7:14 PM
Number of letters in database: 16,112,626
Number of sequences in database: 33,508
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 67,461,018
Number of Sequences: 33508
Number of extensions: 1680811
Number of successful extensions: 4738
Number of sequences better than 1.0e-05: 5
Number of HSP's better than 0.0 without gapping: 4160
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4732
length of database: 16,112,626
effective HSP length: 109
effective length of database: 12,460,254
effective search space used: 7812579258
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
Search to RefSeqCP
BLASTX 2.2.10 [Oct-19-2004]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= LVRM1_0151_G04
(2212 letters)
Database: RefSeqCP
33,732 sequences; 19,266,565 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_532217.2| PREDICTED: similar to NADP-dependent malic enzy... 1014 0.0
Alignment gi|XP_848770.1| PREDICTED: similar to malic enzyme 3, NADP(+)-d... 840 0.0
Alignment gi|XP_542269.2| PREDICTED: similar to malic enzyme 3, NADP(+)-d... 804 0.0
Alignment gi|XP_857227.1| PREDICTED: similar to malic enzyme 3, NADP(+)-d... 801 0.0
Alignment gi|XP_857135.1| PREDICTED: similar to malic enzyme 3, NADP(+)-d... 798 0.0
Alignment gi|XP_857177.1| PREDICTED: similar to malic enzyme 3, NADP(+)-d... 746 0.0
Alignment gi|XP_849530.1| PREDICTED: similar to NAD-dependent malic enzym... 652 0.0
Alignment gi|XP_533402.2| PREDICTED: similar to NAD-dependent malic enzym... 594 e-169
Alignment gi|XP_857051.1| PREDICTED: similar to malic enzyme 3, NADP(+)-d... 551 e-157
Alignment gi|XP_857091.1| PREDICTED: similar to NADP-dependent malic enzy... 296 7e-80
>ref|XP_532217.2| PREDICTED: similar to NADP-dependent malic enzyme (NADP-ME) (Malic
enzyme 1) [Canis familiaris]
Length = 634
Score = 1014 bits (2622), Expect = 0.0
Identities = 505/546 (92%), Positives = 522/546 (95%)
Frame = +3
Query: 213 KDLAFTLEERQQLNIHGLLPPCFISQDIQVLRVIKNFERLNSDFDRYLLLMDLQDRNEKL 392
+DLAFTLEERQQLNIHGLLPPCFISQDIQVLR+IKNFERL SDFDRYLLLMDLQDRNEKL
Sbjct: 88 QDLAFTLEERQQLNIHGLLPPCFISQDIQVLRIIKNFERLTSDFDRYLLLMDLQDRNEKL 147
Query: 393 FYKVLMSDIEKFMPIVYTPTVGLACQQYSLAFRKPRGLFISIHDRGHVASVLNAWPEDVI 572
FY VLMSD+EKFMPIVYTPTVGLACQQYSLAFRKPRGLFISIHDRGH+ASVLNAWPEDVI
Sbjct: 148 FYSVLMSDLEKFMPIVYTPTVGLACQQYSLAFRKPRGLFISIHDRGHIASVLNAWPEDVI 207
Query: 573 KAVVVTDGERILGLGDLGCNGMGIPVGKLALYTACGGVNPQECLPVILDVGTENEELLKD 752
KA+VVTDGERILGLGDLGCNGMGIPVGKLALYTACGG+NPQECLPVILDVGTENE LLKD
Sbjct: 208 KAIVVTDGERILGLGDLGCNGMGIPVGKLALYTACGGMNPQECLPVILDVGTENEALLKD 267
Query: 753 PLYIGLRQRRVRGPEYDDFLDEFMEAVSSKYGMNCLIQFEDFANINAFRLLKKYQNQYCT 932
PLYIGLRQRRVRGPEYDDFLDEFMEAVSSKYGMNCLIQFEDFANINAFRLLKKYQN+YCT
Sbjct: 268 PLYIGLRQRRVRGPEYDDFLDEFMEAVSSKYGMNCLIQFEDFANINAFRLLKKYQNRYCT 327
Query: 933 FNDDIQGTASVAVAGILAALRITKNKLSDQTILFQGAGEAALGIAHLIVMAMEKEGVPKE 1112
FNDDIQGTASVAVAGILAALRITKNKLSDQ ILFQGAGEAALGIAHLIVMAMEKEG+PKE
Sbjct: 328 FNDDIQGTASVAVAGILAALRITKNKLSDQKILFQGAGEAALGIAHLIVMAMEKEGLPKE 387
Query: 1113 KAIKKIWLVDSKGLIVKGRAALTNXXXXXXXXXXXMKNLEAIVQDIKPTALIGVAAIGGA 1292
KA+K IWLVDSKGLIVKGRAALT MKNLEAIVQ+IKPTALIGVAAIGGA
Sbjct: 388 KAMKNIWLVDSKGLIVKGRAALTQEKEQFAHEHEEMKNLEAIVQEIKPTALIGVAAIGGA 447
Query: 1293 FSEQILKDMAAFNERPIIFALSNPTSKAECTAEQCYTLTQGRAIFASGSPFDPVTLPSGQ 1472
FSEQILKDMAAFNERPIIFALSNPTSKAECTAEQCY LT+GRAIFASGSPFDPVTLP+G+
Sbjct: 448 FSEQILKDMAAFNERPIIFALSNPTSKAECTAEQCYKLTKGRAIFASGSPFDPVTLPNGR 507
Query: 1473 TLYPGQGNNSYVFPGVALGVVACGLRHITDKILLTTAEVIAQQVSDKHLEEGRLYPPLNT 1652
TLYPGQGNNSYVFPGVALGVVACGLRHITD I LTTAE+IAQQVSDKHLEEGRLYPPL+T
Sbjct: 508 TLYPGQGNNSYVFPGVALGVVACGLRHITDNIFLTTAEIIAQQVSDKHLEEGRLYPPLDT 567
Query: 1653 IRDVSLKIAEKIVRDAYQEKTATIYPEPSNKEAFVRSQMYSTDYDQILPDGYSWPEEAQK 1832
IRDVSLKIA KIV+DAYQEKTAT+YPEP NKEAFVRSQMY TDYDQILPD YSWPEEAQK
Sbjct: 568 IRDVSLKIAAKIVKDAYQEKTATVYPEPPNKEAFVRSQMYDTDYDQILPDCYSWPEEAQK 627
Query: 1833 IQTKLD 1850
IQTKLD
Sbjct: 628 IQTKLD 633
>ref|XP_848770.1| PREDICTED: similar to malic enzyme 3, NADP(+)-dependent,
mitochondrial isoform 2 [Canis familiaris]
Length = 604
Score = 840 bits (2171), Expect = 0.0
Identities = 403/556 (72%), Positives = 481/556 (86%)
Frame = +3
Query: 174 QRGYAVTRIPHLNKDLAFTLEERQQLNIHGLLPPCFISQDIQVLRVIKNFERLNSDFDRY 353
+RGY VTR PHLNK +AFTLEER QL IHGL+PPCF+SQD+Q+LR+++ +ER SD D+Y
Sbjct: 48 KRGYDVTRNPHLNKGMAFTLEERLQLGIHGLIPPCFLSQDVQLLRIMRYYERQQSDLDKY 107
Query: 354 LLLMDLQDRNEKLFYKVLMSDIEKFMPIVYTPTVGLACQQYSLAFRKPRGLFISIHDRGH 533
++LM LQDRNEKLFY+VL SD+EKFMPIVYTPTVGLACQQY L FR+PRGLFI+IHD+GH
Sbjct: 108 IILMTLQDRNEKLFYRVLTSDVEKFMPIVYTPTVGLACQQYGLTFRRPRGLFITIHDKGH 167
Query: 534 VASVLNAWPEDVIKAVVVTDGERILGLGDLGCNGMGIPVGKLALYTACGGVNPQECLPVI 713
+A++LN+WPED IKAVVVTDGERILGLGDLGC GMGIPVGKLALYTACGGV+PQ+CLPV+
Sbjct: 168 LATMLNSWPEDDIKAVVVTDGERILGLGDLGCYGMGIPVGKLALYTACGGVSPQQCLPVL 227
Query: 714 LDVGTENEELLKDPLYIGLRQRRVRGPEYDDFLDEFMEAVSSKYGMNCLIQFEDFANINA 893
LDVGT NEELL+DPLYIGL+ +RVRG EYDD LDEFM+AV+ K+G+NCLIQFEDFAN NA
Sbjct: 228 LDVGTNNEELLRDPLYIGLKHQRVRGKEYDDLLDEFMQAVTDKFGINCLIQFEDFANANA 287
Query: 894 FRLLKKYQNQYCTFNDDIQGTASVAVAGILAALRITKNKLSDQTILFQGAGEAALGIAHL 1073
FRLL KY+N+YC FNDDIQGTASVAVAGILAALRITKNKLS+ +FQGAGEAA+GIAHL
Sbjct: 288 FRLLNKYRNKYCMFNDDIQGTASVAVAGILAALRITKNKLSNHVFVFQGAGEAAMGIAHL 347
Query: 1074 IVMAMEKEGVPKEKAIKKIWLVDSKGLIVKGRAALTNXXXXXXXXXXXMKNLEAIVQDIK 1253
+VMA+EKEGVPK +A +KIW+VDSKGLIVKGR+ L + +K+LE +V+ +K
Sbjct: 348 LVMALEKEGVPKAEATRKIWMVDSKGLIVKGRSHLNHEKEMFAQDHPEVKSLEEVVRLVK 407
Query: 1254 PTALIGVAAIGGAFSEQILKDMAAFNERPIIFALSNPTSKAECTAEQCYTLTQGRAIFAS 1433
PTA+IGVAAI GAF+EQIL+DMA+F+ERPIIFALSNPTSKAECTAE+CY +T+GR IFAS
Sbjct: 408 PTAIIGVAAIAGAFTEQILRDMASFHERPIIFALSNPTSKAECTAEKCYRVTEGRGIFAS 467
Query: 1434 GSPFDPVTLPSGQTLYPGQGNNSYVFPGVALGVVACGLRHITDKILLTTAEVIAQQVSDK 1613
GSPF VTL G+T PGQGNN+YVFPGVALGV+A G+RHI D+I L TAE IAQ+VS++
Sbjct: 468 GSPFKSVTLEDGRTFIPGQGNNAYVFPGVALGVIAGGIRHIPDEIFLLTAEQIAQEVSEQ 527
Query: 1614 HLEEGRLYPPLNTIRDVSLKIAEKIVRDAYQEKTATIYPEPSNKEAFVRSQMYSTDYDQI 1793
HL +GRLYPPL+TIRDVSL+IA K++ AY+ A+ YPEP +KEAFVRS +Y+ DYD
Sbjct: 528 HLSQGRLYPPLSTIRDVSLRIAIKVLDFAYKHNLASYYPEPKDKEAFVRSLVYTPDYDSF 587
Query: 1794 LPDGYSWPEEAQKIQT 1841
D Y+WP+EA +QT
Sbjct: 588 TLDSYTWPKEAMNVQT 603
>ref|XP_542269.2| PREDICTED: similar to malic enzyme 3, NADP(+)-dependent,
mitochondrial isoform 1 [Canis familiaris]
Length = 569
Score = 804 bits (2076), Expect = 0.0
Identities = 392/568 (69%), Positives = 469/568 (82%), Gaps = 27/568 (4%)
Frame = +3
Query: 219 LAFTLEERQQLNIHGLLPPCFISQDIQVLRVIKNFERLNSDFDRYLLLMDLQDRNEKLFY 398
+AFTLEER QL IHGL+PPCF+SQD+Q+LR+++ +ER SD D+Y++LM LQDRNEKLFY
Sbjct: 1 MAFTLEERLQLGIHGLIPPCFLSQDVQLLRIMRYYERQQSDLDKYIILMTLQDRNEKLFY 60
Query: 399 KVLMSDIEKFMPIVYTPTVGLACQQYSLAFRKPR-------------------------- 500
+VL SD+EKFMPIVYTPTVGLACQQY L FR+PR
Sbjct: 61 RVLTSDVEKFMPIVYTPTVGLACQQYGLTFRRPRSAKEGLRGESHYGVDSLSSEGLSCSA 120
Query: 501 -GLFISIHDRGHVASVLNAWPEDVIKAVVVTDGERILGLGDLGCNGMGIPVGKLALYTAC 677
GLFI+IHD+GH+A++LN+WPED IKAVVVTDGERILGLGDLGC GMGIPVGKLALYTAC
Sbjct: 121 RGLFITIHDKGHLATMLNSWPEDDIKAVVVTDGERILGLGDLGCYGMGIPVGKLALYTAC 180
Query: 678 GGVNPQECLPVILDVGTENEELLKDPLYIGLRQRRVRGPEYDDFLDEFMEAVSSKYGMNC 857
GGV+PQ+CLPV+LDVGT NEELL+DPLYIGL+ +RVRG EYDD LDEFM+AV+ K+G+NC
Sbjct: 181 GGVSPQQCLPVLLDVGTNNEELLRDPLYIGLKHQRVRGKEYDDLLDEFMQAVTDKFGINC 240
Query: 858 LIQFEDFANINAFRLLKKYQNQYCTFNDDIQGTASVAVAGILAALRITKNKLSDQTILFQ 1037
LIQFEDFAN NAFRLL KY+N+YC FNDDIQGTASVAVAGILAALRITKNKLS+ +FQ
Sbjct: 241 LIQFEDFANANAFRLLNKYRNKYCMFNDDIQGTASVAVAGILAALRITKNKLSNHVFVFQ 300
Query: 1038 GAGEAALGIAHLIVMAMEKEGVPKEKAIKKIWLVDSKGLIVKGRAALTNXXXXXXXXXXX 1217
GAGEAA+GIAHL+VMA+EKEGVPK +A +KIW+VDSKGLIVKGR+ L +
Sbjct: 301 GAGEAAMGIAHLLVMALEKEGVPKAEATRKIWMVDSKGLIVKGRSHLNHEKEMFAQDHPE 360
Query: 1218 MKNLEAIVQDIKPTALIGVAAIGGAFSEQILKDMAAFNERPIIFALSNPTSKAECTAEQC 1397
+K+LE +V+ +KPTA+IGVAAI GAF+EQIL+DMA+F+ERPIIFALSNPTSKAECTAE+C
Sbjct: 361 VKSLEEVVRLVKPTAIIGVAAIAGAFTEQILRDMASFHERPIIFALSNPTSKAECTAEKC 420
Query: 1398 YTLTQGRAIFASGSPFDPVTLPSGQTLYPGQGNNSYVFPGVALGVVACGLRHITDKILLT 1577
Y +T+GR IFASGSPF VTL G+T PGQGNN+YVFPGVALGV+A G+RHI D+I L
Sbjct: 421 YRVTEGRGIFASGSPFKSVTLEDGRTFIPGQGNNAYVFPGVALGVIAGGIRHIPDEIFLL 480
Query: 1578 TAEVIAQQVSDKHLEEGRLYPPLNTIRDVSLKIAEKIVRDAYQEKTATIYPEPSNKEAFV 1757
TAE IAQ+VS++HL +GRLYPPL+TIRDVSL+IA K++ AY+ A+ YPEP +KEAFV
Sbjct: 481 TAEQIAQEVSEQHLSQGRLYPPLSTIRDVSLRIAIKVLDFAYKHNLASYYPEPKDKEAFV 540
Query: 1758 RSQMYSTDYDQILPDGYSWPEEAQKIQT 1841
RS +Y+ DYD D Y+WP+EA +QT
Sbjct: 541 RSLVYTPDYDSFTLDSYTWPKEAMNVQT 568
>ref|XP_857227.1| PREDICTED: similar to malic enzyme 3, NADP(+)-dependent,
mitochondrial isoform 7 [Canis familiaris]
Length = 562
Score = 801 bits (2070), Expect = 0.0
Identities = 390/561 (69%), Positives = 468/561 (83%), Gaps = 20/561 (3%)
Frame = +3
Query: 219 LAFTLEERQQLNIHGLLPPCFISQDIQVLRVIKNFERLNSDFDRYLLLMDLQDRNEKLFY 398
+AFTLEER QL IHGL+PPCF+SQD+Q+LR+++ +ER SD D+Y++LM LQDRNEKLFY
Sbjct: 1 MAFTLEERLQLGIHGLIPPCFLSQDVQLLRIMRYYERQQSDLDKYIILMTLQDRNEKLFY 60
Query: 399 KVLMSDIEKFMPIVYTPTVGLACQQYSLAFRKPRGLFISIHDRGHVASVLNAWPEDVIKA 578
+VL SD+EKFMPIVYTPTVGLACQQY L FR+PRGLFI+IHD+GH+A++LN+WPED IKA
Sbjct: 61 RVLTSDVEKFMPIVYTPTVGLACQQYGLTFRRPRGLFITIHDKGHLATMLNSWPEDDIKA 120
Query: 579 VVVTDGERILGLGDLGCNGMGIPVGKLALYTACGGVNPQECLPVILDVGTENEELLKDPL 758
VVVTDGERILGLGDLGC GMGIPVGKLALYTACGGV+PQ+CLPV+LDVGT NEELL+DPL
Sbjct: 121 VVVTDGERILGLGDLGCYGMGIPVGKLALYTACGGVSPQQCLPVLLDVGTNNEELLRDPL 180
Query: 759 YIGLRQRRVRGPEYDDFLDEFMEAVSSKYGMNCLIQFEDFANINAFRLLKKYQNQYCTFN 938
YIGL+ +RVRG EYDD LDEFM+AV+ K+G+NCLIQFEDFAN NAFRLL KY+N+YC FN
Sbjct: 181 YIGLKHQRVRGKEYDDLLDEFMQAVTDKFGINCLIQFEDFANANAFRLLNKYRNKYCMFN 240
Query: 939 DDIQGTASVAVAGILAALRITKNKLSDQTILFQGAGEAALGIAHLIVMAMEKEGVPKEKA 1118
DDIQGTASVAVAGILAALRITKNKLS+ +FQGAGEAA+GIAHL+VMA+EKEGVPK +A
Sbjct: 241 DDIQGTASVAVAGILAALRITKNKLSNHVFVFQGAGEAAMGIAHLLVMALEKEGVPKAEA 300
Query: 1119 IKKIWLVDSKGLIVKGRAA--------------------LTNXXXXXXXXXXXMKNLEAI 1238
+KIW+VDSKGLIVK ++ L + +K+LE +
Sbjct: 301 TRKIWMVDSKGLIVKVLSSSYQCLACNECVIMPADPKDHLNHEKEMFAQDHPEVKSLEEV 360
Query: 1239 VQDIKPTALIGVAAIGGAFSEQILKDMAAFNERPIIFALSNPTSKAECTAEQCYTLTQGR 1418
V+ +KPTA+IGVAAI GAF+EQIL+DMA+F+ERPIIFALSNPTSKAECTAE+CY +T+GR
Sbjct: 361 VRLVKPTAIIGVAAIAGAFTEQILRDMASFHERPIIFALSNPTSKAECTAEKCYRVTEGR 420
Query: 1419 AIFASGSPFDPVTLPSGQTLYPGQGNNSYVFPGVALGVVACGLRHITDKILLTTAEVIAQ 1598
IFASGSPF VTL G+T PGQGNN+YVFPGVALGV+A G+RHI D+I L TAE IAQ
Sbjct: 421 GIFASGSPFKSVTLEDGRTFIPGQGNNAYVFPGVALGVIAGGIRHIPDEIFLLTAEQIAQ 480
Query: 1599 QVSDKHLEEGRLYPPLNTIRDVSLKIAEKIVRDAYQEKTATIYPEPSNKEAFVRSQMYST 1778
+VS++HL +GRLYPPL+TIRDVSL+IA K++ AY+ A+ YPEP +KEAFVRS +Y+
Sbjct: 481 EVSEQHLSQGRLYPPLSTIRDVSLRIAIKVLDFAYKHNLASYYPEPKDKEAFVRSLVYTP 540
Query: 1779 DYDQILPDGYSWPEEAQKIQT 1841
DYD D Y+WP+EA +QT
Sbjct: 541 DYDSFTLDSYTWPKEAMNVQT 561
>ref|XP_857135.1| PREDICTED: similar to malic enzyme 3, NADP(+)-dependent,
mitochondrial isoform 5 [Canis familiaris]
Length = 573
Score = 798 bits (2061), Expect = 0.0
Identities = 392/572 (68%), Positives = 469/572 (81%), Gaps = 31/572 (5%)
Frame = +3
Query: 219 LAFTLEERQQLNIHGLLPPCFISQDIQVLRVIKNFERLNSDFDRYLLLMDLQDRNEKLFY 398
+AFTLEER QL IHGL+PPCF+SQD+Q+LR+++ +ER SD D+Y++LM LQDRNEKLFY
Sbjct: 1 MAFTLEERLQLGIHGLIPPCFLSQDVQLLRIMRYYERQQSDLDKYIILMTLQDRNEKLFY 60
Query: 399 KVLMSDIEKFMPIVYTPTVGLACQQYSLAFRKPRGLFISIHDRGHVASVLNAWPEDVIKA 578
+VL SD+EKFMPIVYTPTVGLACQQY L FR+PRGLFI+IHD+GH+A++LN+WPED IKA
Sbjct: 61 RVLTSDVEKFMPIVYTPTVGLACQQYGLTFRRPRGLFITIHDKGHLATMLNSWPEDDIKA 120
Query: 579 VVVTDGERILGLGDLGCNGMGIPVGKLALYTACGGVNPQECLPVILDVGTENEELLKDPL 758
VVVTDGERILGLGDLGC GMGIPVGKLALYTACGGV+PQ+CLPV+LDVGT NEELL+DPL
Sbjct: 121 VVVTDGERILGLGDLGCYGMGIPVGKLALYTACGGVSPQQCLPVLLDVGTNNEELLRDPL 180
Query: 759 YIGLRQRRVRGPEYDDFLDEFMEAVSSKYGMNCLIQFEDFANINAFRLLKKYQNQYCTFN 938
YIGL+ +RVRG EYDD LDEFM+AV+ K+G+NCLIQFEDFAN NAFRLL KY+N+YC FN
Sbjct: 181 YIGLKHQRVRGKEYDDLLDEFMQAVTDKFGINCLIQFEDFANANAFRLLNKYRNKYCMFN 240
Query: 939 DDIQGTASVAVAGILAALRITKNKLSDQTILFQGAGEAALGIAHLIVMAMEKEGVPKEKA 1118
DDIQGTASVAVAGILAALRITKNKLS+ +FQGAGEAA+GIAHL+VMA+EKEGVPK +A
Sbjct: 241 DDIQGTASVAVAGILAALRITKNKLSNHVFVFQGAGEAAMGIAHLLVMALEKEGVPKAEA 300
Query: 1119 IKKIWLVDSKGLIVK---GRAALTNXXXXXXXXXXXMKNLEAIVQDIKPTALIGVAAIGG 1289
+KIW+VDSKGLIVK GR+ L + +K+LE +V+ +KPTA+IGVAAI G
Sbjct: 301 TRKIWMVDSKGLIVKVLSGRSHLNHEKEMFAQDHPEVKSLEEVVRLVKPTAIIGVAAIAG 360
Query: 1290 AFSEQILKDMAAFNERPIIFALSNPTSKAECTAEQCYTLTQ------------------- 1412
AF+EQIL+DMA+F+ERPIIFALSNPTSKAECTAE+CY +T+
Sbjct: 361 AFTEQILRDMASFHERPIIFALSNPTSKAECTAEKCYRVTEVSGESFLPQAERTYPSSYH 420
Query: 1413 ---------GRAIFASGSPFDPVTLPSGQTLYPGQGNNSYVFPGVALGVVACGLRHITDK 1565
GR IFASGSPF VTL G+T PGQGNN+YVFPGVALGV+A G+RHI D+
Sbjct: 421 HVILFRVPLGRGIFASGSPFKSVTLEDGRTFIPGQGNNAYVFPGVALGVIAGGIRHIPDE 480
Query: 1566 ILLTTAEVIAQQVSDKHLEEGRLYPPLNTIRDVSLKIAEKIVRDAYQEKTATIYPEPSNK 1745
I L TAE IAQ+VS++HL +GRLYPPL+TIRDVSL+IA K++ AY+ A+ YPEP +K
Sbjct: 481 IFLLTAEQIAQEVSEQHLSQGRLYPPLSTIRDVSLRIAIKVLDFAYKHNLASYYPEPKDK 540
Query: 1746 EAFVRSQMYSTDYDQILPDGYSWPEEAQKIQT 1841
EAFVRS +Y+ DYD D Y+WP+EA +QT
Sbjct: 541 EAFVRSLVYTPDYDSFTLDSYTWPKEAMNVQT 572
>ref|XP_857177.1| PREDICTED: similar to malic enzyme 3, NADP(+)-dependent,
mitochondrial isoform 6 [Canis familiaris]
Length = 513
Score = 746 bits (1926), Expect = 0.0
Identities = 363/541 (67%), Positives = 437/541 (80%)
Frame = +3
Query: 219 LAFTLEERQQLNIHGLLPPCFISQDIQVLRVIKNFERLNSDFDRYLLLMDLQDRNEKLFY 398
+AFTLEER QL IHGL+PPCF+SQD+Q+LR+++ +ER SD D+Y++LM LQDRNEKLFY
Sbjct: 1 MAFTLEERLQLGIHGLIPPCFLSQDVQLLRIMRYYERQQSDLDKYIILMTLQDRNEKLFY 60
Query: 399 KVLMSDIEKFMPIVYTPTVGLACQQYSLAFRKPRGLFISIHDRGHVASVLNAWPEDVIKA 578
+VL SD+EKFMPIVYTPTVGLACQQY L FR+PRGLFI+IHD+GH+A++LN+WPED IKA
Sbjct: 61 RVLTSDVEKFMPIVYTPTVGLACQQYGLTFRRPRGLFITIHDKGHLATMLNSWPEDDIKA 120
Query: 579 VVVTDGERILGLGDLGCNGMGIPVGKLALYTACGGVNPQECLPVILDVGTENEELLKDPL 758
VVVTDGERILGLGDLGC GMGIPVGKLALYTACGGV+PQ+CLPV+LDVGT NEELL+DPL
Sbjct: 121 VVVTDGERILGLGDLGCYGMGIPVGKLALYTACGGVSPQQCLPVLLDVGTNNEELLRDPL 180
Query: 759 YIGLRQRRVRGPEYDDFLDEFMEAVSSKYGMNCLIQFEDFANINAFRLLKKYQNQYCTFN 938
YIGL+ +RVRG EYDD LDEFM+AV+ K+G+NCLIQFEDFAN NAFRLL KY+N+YC FN
Sbjct: 181 YIGLKHQRVRGKEYDDLLDEFMQAVTDKFGINCLIQFEDFANANAFRLLNKYRNKYCMFN 240
Query: 939 DDIQGTASVAVAGILAALRITKNKLSDQTILFQGAGEAALGIAHLIVMAMEKEGVPKEKA 1118
DDIQGTASVAVAGILAALRITKNKLS+ +FQGAGEAA+GIAHL+VMA+EKEGVPK +A
Sbjct: 241 DDIQGTASVAVAGILAALRITKNKLSNHVFVFQGAGEAAMGIAHLLVMALEKEGVPKAEA 300
Query: 1119 IKKIWLVDSKGLIVKGRAALTNXXXXXXXXXXXMKNLEAIVQDIKPTALIGVAAIGGAFS 1298
+KIW+VDSKGLIVKGR+ L + +K+LE +V+ +KPTA+IG
Sbjct: 301 TRKIWMVDSKGLIVKGRSHLNHEKEMFAQDHPEVKSLEEVVRLVKPTAIIG--------- 351
Query: 1299 EQILKDMAAFNERPIIFALSNPTSKAECTAEQCYTLTQGRAIFASGSPFDPVTLPSGQTL 1478
+AECTAE+CY +T+GR IFASGSPF VTL G+T
Sbjct: 352 --------------------RRRQEAECTAEKCYRVTEGRGIFASGSPFKSVTLEDGRTF 391
Query: 1479 YPGQGNNSYVFPGVALGVVACGLRHITDKILLTTAEVIAQQVSDKHLEEGRLYPPLNTIR 1658
PGQGNN+YVFPGVALGV+A G+RHI D+I L TAE IAQ+VS++HL +GRLYPPL+TIR
Sbjct: 392 IPGQGNNAYVFPGVALGVIAGGIRHIPDEIFLLTAEQIAQEVSEQHLSQGRLYPPLSTIR 451
Query: 1659 DVSLKIAEKIVRDAYQEKTATIYPEPSNKEAFVRSQMYSTDYDQILPDGYSWPEEAQKIQ 1838
DVSL+IA K++ AY+ A+ YPEP +KEAFVRS +Y+ DYD D Y+WP+EA +Q
Sbjct: 452 DVSLRIAIKVLDFAYKHNLASYYPEPKDKEAFVRSLVYTPDYDSFTLDSYTWPKEAMNVQ 511
Query: 1839 T 1841
T
Sbjct: 512 T 512
>ref|XP_849530.1| PREDICTED: similar to NAD-dependent malic enzyme, mitochondrial
precursor (NAD-ME) (Malic enzyme 2) isoform 2 [Canis
familiaris]
Length = 584
Score = 652 bits (1683), Expect = 0.0
Identities = 318/562 (56%), Positives = 406/562 (72%), Gaps = 3/562 (0%)
Frame = +3
Query: 150 APRRRHTLQRGYAVTRIPHLNKDLAFTLEERQQLNIHGLLPPCFISQDIQVLRVIKNFER 329
A R H ++G + P NK +AFTL+ERQ L + GLLPP +QDIQ LR KN ++
Sbjct: 15 ACRHIHIKEKGKPLMLNPRTNKGMAFTLQERQMLGLQGLLPPKIETQDIQALRFHKNVKK 74
Query: 330 LNSDFDRYLLLMDLQDRNEKLFYKVLMSDIEKFMPIVYTPTVGLACQQYSLAFRKPRGLF 509
+N ++Y+ +M +Q+RNEKLFY++L DIE MPIVYTPTVGLAC QY FR+P+GLF
Sbjct: 75 MNGPLEKYIYIMGIQERNEKLFYRILQDDIESLMPIVYTPTVGLACSQYGHIFRRPKGLF 134
Query: 510 ISIHDRGHVASVLNAWPEDVIKAVVVTDGERILGLGDLGCNGMGIPVGKLALYTACGGVN 689
ISI DRGHV S+++ WPE+ +KAVVVTDGERILGLGDLG GMGIPVGKL LYTAC G+
Sbjct: 135 ISISDRGHVRSIVDNWPENHVKAVVVTDGERILGLGDLGVYGMGIPVGKLCLYTACAGIR 194
Query: 690 PQECLPVILDVGTENEELLKDPLYIGLRQRRVRGPEYDDFLDEFMEAVSSKYGMNCLIQF 869
P CLPV +DVGT+N LLKDP Y+GL Q+R R YDD +DEFM+A++ +YG N LIQF
Sbjct: 195 PDRCLPVCIDVGTDNPALLKDPFYMGLYQKRDRSQRYDDLIDEFMKAITDRYGQNTLIQF 254
Query: 870 EDFANINAFRLLKKYQNQYCTFNDDIQGTASVAVAGILAALRITKNKLSDQTILFQGAGE 1049
EDF N NAFR L+KY+ +YCTFNDDIQGTA+VA+AG+LAA ++ S+ ILF GAGE
Sbjct: 255 EDFGNHNAFRFLRKYREKYCTFNDDIQGTAAVALAGLLAAQKVIGKSFSEHKILFLGAGE 314
Query: 1050 AALGIAHLIVMAMEKEGVPKEKAIKKIWLVDSKGLIVKGR-AALTNXXXXXXXXXXXM-- 1220
AALGIA+LIVMAM + G+ +E+A KKIW+VD GL+ KGR A + N +
Sbjct: 315 AALGIANLIVMAMVENGLSEEEAQKKIWMVDKFGLLFKGRKAKIENHQEPFAHSAPGIIP 374
Query: 1221 KNLEAIVQDIKPTALIGVAAIGGAFSEQILKDMAAFNERPIIFALSNPTSKAECTAEQCY 1400
E V ++P+A+IGVA G F+ ++K MA NERP+IFALSNPT+ AECTAE+ Y
Sbjct: 375 DTFEDAVNILRPSAIIGVAGAGRLFTPGVIKAMADINERPVIFALSNPTAMAECTAEEAY 434
Query: 1401 TLTQGRAIFASGSPFDPVTLPSGQTLYPGQGNNSYVFPGVALGVVACGLRHITDKILLTT 1580
TLT+GR +FASGSPF+PV L GQ PGQGNN Y+FPGVAL V+ C RHI+D + L
Sbjct: 435 TLTEGRCLFASGSPFEPVKLSDGQLFTPGQGNNVYIFPGVALAVILCNTRHISDHVFLEA 494
Query: 1581 AEVIAQQVSDKHLEEGRLYPPLNTIRDVSLKIAEKIVRDAYQEKTATIYPEPSNKEAFVR 1760
A+ +A Q++DK L +GRLYPPL I++VS+ IA K+ Y K A YPEP +K ++R
Sbjct: 495 AKALANQLTDKELAQGRLYPPLADIQEVSINIAIKVTEYLYANKMAFRYPEPEDKAKYIR 554
Query: 1761 SQMYSTDYDQILPDGYSWPEEA 1826
+++ ++YD +LPD Y WPE A
Sbjct: 555 ERIWRSEYDSLLPDVYDWPESA 576
>ref|XP_533402.2| PREDICTED: similar to NAD-dependent malic enzyme, mitochondrial
precursor (NAD-ME) (Malic enzyme 2) isoform 1 [Canis
familiaris]
Length = 499
Score = 594 bits (1531), Expect = e-169
Identities = 288/491 (58%), Positives = 362/491 (73%), Gaps = 3/491 (0%)
Frame = +3
Query: 363 MDLQDRNEKLFYKVLMSDIEKFMPIVYTPTVGLACQQYSLAFRKPRGLFISIHDRGHVAS 542
M +Q+RNEKLFY++L DIE MPIVYTPTVGLAC QY FR+P+GLFISI DRGHV S
Sbjct: 1 MGIQERNEKLFYRILQDDIESLMPIVYTPTVGLACSQYGHIFRRPKGLFISISDRGHVRS 60
Query: 543 VLNAWPEDVIKAVVVTDGERILGLGDLGCNGMGIPVGKLALYTACGGVNPQECLPVILDV 722
+++ WPE+ +KAVVVTDGERILGLGDLG GMGIPVGKL LYTAC G+ P CLPV +DV
Sbjct: 61 IVDNWPENHVKAVVVTDGERILGLGDLGVYGMGIPVGKLCLYTACAGIRPDRCLPVCIDV 120
Query: 723 GTENEELLKDPLYIGLRQRRVRGPEYDDFLDEFMEAVSSKYGMNCLIQFEDFANINAFRL 902
GT+N LLKDP Y+GL Q+R R YDD +DEFM+A++ +YG N LIQFEDF N NAFR
Sbjct: 121 GTDNPALLKDPFYMGLYQKRDRSQRYDDLIDEFMKAITDRYGQNTLIQFEDFGNHNAFRF 180
Query: 903 LKKYQNQYCTFNDDIQGTASVAVAGILAALRITKNKLSDQTILFQGAGEAALGIAHLIVM 1082
L+KY+ +YCTFNDDIQGTA+VA+AG+LAA ++ S+ ILF GAGEAALGIA+LIVM
Sbjct: 181 LRKYREKYCTFNDDIQGTAAVALAGLLAAQKVIGKSFSEHKILFLGAGEAALGIANLIVM 240
Query: 1083 AMEKEGVPKEKAIKKIWLVDSKGLIVKGR-AALTNXXXXXXXXXXXM--KNLEAIVQDIK 1253
AM + G+ +E+A KKIW+VD GL+ KGR A + N + E V ++
Sbjct: 241 AMVENGLSEEEAQKKIWMVDKFGLLFKGRKAKIENHQEPFAHSAPGIIPDTFEDAVNILR 300
Query: 1254 PTALIGVAAIGGAFSEQILKDMAAFNERPIIFALSNPTSKAECTAEQCYTLTQGRAIFAS 1433
P+A+IGVA G F+ ++K MA NERP+IFALSNPT+ AECTAE+ YTLT+GR +FAS
Sbjct: 301 PSAIIGVAGAGRLFTPGVIKAMADINERPVIFALSNPTAMAECTAEEAYTLTEGRCLFAS 360
Query: 1434 GSPFDPVTLPSGQTLYPGQGNNSYVFPGVALGVVACGLRHITDKILLTTAEVIAQQVSDK 1613
GSPF+PV L GQ PGQGNN Y+FPGVAL V+ C RHI+D + L A+ +A Q++DK
Sbjct: 361 GSPFEPVKLSDGQLFTPGQGNNVYIFPGVALAVILCNTRHISDHVFLEAAKALANQLTDK 420
Query: 1614 HLEEGRLYPPLNTIRDVSLKIAEKIVRDAYQEKTATIYPEPSNKEAFVRSQMYSTDYDQI 1793
L +GRLYPPL I++VS+ IA K+ Y K A YPEP +K ++R +++ ++YD +
Sbjct: 421 ELAQGRLYPPLADIQEVSINIAIKVTEYLYANKMAFRYPEPEDKAKYIRERIWRSEYDSL 480
Query: 1794 LPDGYSWPEEA 1826
LPD Y WPE A
Sbjct: 481 LPDVYDWPESA 491
>ref|XP_857051.1| PREDICTED: similar to malic enzyme 3, NADP(+)-dependent,
mitochondrial isoform 3 [Canis familiaris]
Length = 361
Score = 551 bits (1421), Expect = e-157
Identities = 262/351 (74%), Positives = 311/351 (88%)
Frame = +3
Query: 219 LAFTLEERQQLNIHGLLPPCFISQDIQVLRVIKNFERLNSDFDRYLLLMDLQDRNEKLFY 398
+AFTLEER QL IHGL+PPCF+SQD+Q+LR+++ +ER SD D+Y++LM LQDRNEKLFY
Sbjct: 1 MAFTLEERLQLGIHGLIPPCFLSQDVQLLRIMRYYERQQSDLDKYIILMTLQDRNEKLFY 60
Query: 399 KVLMSDIEKFMPIVYTPTVGLACQQYSLAFRKPRGLFISIHDRGHVASVLNAWPEDVIKA 578
+VL SD+EKFMPIVYTPTVGLACQQY L FR+PRGLFI+IHD+GH+A++LN+WPED IKA
Sbjct: 61 RVLTSDVEKFMPIVYTPTVGLACQQYGLTFRRPRGLFITIHDKGHLATMLNSWPEDDIKA 120
Query: 579 VVVTDGERILGLGDLGCNGMGIPVGKLALYTACGGVNPQECLPVILDVGTENEELLKDPL 758
VVVTDGERILGLGDLGC GMGIPVGKLALYTACGGV+PQ+CLPV+LDVGT NEELL+DPL
Sbjct: 121 VVVTDGERILGLGDLGCYGMGIPVGKLALYTACGGVSPQQCLPVLLDVGTNNEELLRDPL 180
Query: 759 YIGLRQRRVRGPEYDDFLDEFMEAVSSKYGMNCLIQFEDFANINAFRLLKKYQNQYCTFN 938
YIGL+ +RVRG EYDD LDEFM+AV+ K+G+NCLIQFEDFAN NAFRLL KY+N+YC FN
Sbjct: 181 YIGLKHQRVRGKEYDDLLDEFMQAVTDKFGINCLIQFEDFANANAFRLLNKYRNKYCMFN 240
Query: 939 DDIQGTASVAVAGILAALRITKNKLSDQTILFQGAGEAALGIAHLIVMAMEKEGVPKEKA 1118
DDIQGTASVAVAGILAALRITKNKLS+ +FQGAGEAA+GIAHL+VMA+EKEGVPK +A
Sbjct: 241 DDIQGTASVAVAGILAALRITKNKLSNHVFVFQGAGEAAMGIAHLLVMALEKEGVPKAEA 300
Query: 1119 IKKIWLVDSKGLIVKGRAALTNXXXXXXXXXXXMKNLEAIVQDIKPTALIG 1271
+KIW+VDSKGLIVKGR+ L + +K+LE +V+ +KPTA+IG
Sbjct: 301 TRKIWMVDSKGLIVKGRSHLNHEKEMFAQDHPEVKSLEEVVRLVKPTAIIG 351
>ref|XP_857091.1| PREDICTED: similar to NADP-dependent malic enzyme, mitochondrial
precursor (NADP-ME) (Malic enzyme 3) isoform 4 [Canis
familiaris]
Length = 231
Score = 296 bits (757), Expect = 7e-80
Identities = 144/227 (63%), Positives = 180/227 (79%)
Frame = +3
Query: 1161 KGRAALTNXXXXXXXXXXXMKNLEAIVQDIKPTALIGVAAIGGAFSEQILKDMAAFNERP 1340
KGR+ L + +K+LE +V+ +KPTA+IGVAAI GAF+EQIL+DMA+F+ERP
Sbjct: 4 KGRSHLNHEKEMFAQDHPEVKSLEEVVRLVKPTAIIGVAAIAGAFTEQILRDMASFHERP 63
Query: 1341 IIFALSNPTSKAECTAEQCYTLTQGRAIFASGSPFDPVTLPSGQTLYPGQGNNSYVFPGV 1520
IIFALSNPTSKAECTAE+CY +T+GR IFASGSPF VTL G+T PGQGNN+YVFPGV
Sbjct: 64 IIFALSNPTSKAECTAEKCYRVTEGRGIFASGSPFKSVTLEDGRTFIPGQGNNAYVFPGV 123
Query: 1521 ALGVVACGLRHITDKILLTTAEVIAQQVSDKHLEEGRLYPPLNTIRDVSLKIAEKIVRDA 1700
ALGV+A G+RHI D+I L TAE IAQ+VS++HL +GRLYPPL+TIRDVSL+IA K++ A
Sbjct: 124 ALGVIAGGIRHIPDEIFLLTAEQIAQEVSEQHLSQGRLYPPLSTIRDVSLRIAIKVLDFA 183
Query: 1701 YQEKTATIYPEPSNKEAFVRSQMYSTDYDQILPDGYSWPEEAQKIQT 1841
Y+ A+ YPEP +KEAFVRS +Y+ DYD D Y+WP+EA +QT
Sbjct: 184 YKHNLASYYPEPKDKEAFVRSLVYTPDYDSFTLDSYTWPKEAMNVQT 230
Database: RefSeqCP
Posted date: Aug 1, 2006 9:25 PM
Number of letters in database: 19,266,565
Number of sequences in database: 33,732
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 79,277,383
Number of Sequences: 33732
Number of extensions: 1969684
Number of successful extensions: 5890
Number of sequences better than 1.0e-05: 10
Number of HSP's better than 0.0 without gapping: 5056
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5878
length of database: 19,266,565
effective HSP length: 110
effective length of database: 15,556,045
effective search space used: 9738084170
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
Search to RefSeqSP
BLASTX 2.2.10 [Oct-19-2004]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= LVRM1_0151_G04
(2212 letters)
Database: RefSeqSP
1040 sequences; 434,620 total letters
Searching...done
***** No hits found ******
Database: RefSeqSP
Posted date: Aug 1, 2006 7:14 PM
Number of letters in database: 434,620
Number of sequences in database: 1040
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,864,736
Number of Sequences: 1040
Number of extensions: 46536
Number of successful extensions: 107
Number of sequences better than 1.0e-05: 0
Number of HSP's better than 0.0 without gapping: 100
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 107
length of database: 434,620
effective HSP length: 84
effective length of database: 347,260
effective search space used: 226413520
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
Search to RefSeqHP
BLASTX 2.2.10 [Oct-19-2004]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= LVRM1_0151_G04
(2212 letters)
Database: RefSeqHP
39,411 sequences; 17,774,539 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_002386.1| cytosolic malic enzyme 1 [Homo sapiens] 1045 0.0
Alignment gi|NP_001014811.1| malic enzyme 3, NADP(+)-dependent, mitochond... 835 0.0
Alignment gi|NP_006671.2| malic enzyme 3, NADP(+)-dependent, mitochondria... 835 0.0
Alignment gi|NP_002387.1| malic enzyme 2, NAD(+)-dependent, mitochondrial... 645 0.0
Alignment gi|XP_934770.1| PREDICTED: similar to NAD-dependent malic enzym... 239 7e-63
Alignment gi|XP_944182.1| PREDICTED: similar to NAD-dependent malic enzym... 239 7e-63
>ref|NP_002386.1| cytosolic malic enzyme 1 [Homo sapiens]
Length = 572
Score = 1045 bits (2703), Expect = 0.0
Identities = 519/571 (90%), Positives = 541/571 (94%)
Frame = +3
Query: 138 MEPRAPRRRHTLQRGYAVTRIPHLNKDLAFTLEERQQLNIHGLLPPCFISQDIQVLRVIK 317
MEP APRRRHT QRGY +TR PHLNKDLAFTLEERQQLNIHGLLPP F SQ+IQVLRV+K
Sbjct: 1 MEPEAPRRRHTHQRGYLLTRNPHLNKDLAFTLEERQQLNIHGLLPPSFNSQEIQVLRVVK 60
Query: 318 NFERLNSDFDRYLLLMDLQDRNEKLFYKVLMSDIEKFMPIVYTPTVGLACQQYSLAFRKP 497
NFE LNSDFDRYLLLMDLQDRNEKLFY+VL SDIEKFMPIVYTPTVGLACQQYSL FRKP
Sbjct: 61 NFEHLNSDFDRYLLLMDLQDRNEKLFYRVLTSDIEKFMPIVYTPTVGLACQQYSLVFRKP 120
Query: 498 RGLFISIHDRGHVASVLNAWPEDVIKAVVVTDGERILGLGDLGCNGMGIPVGKLALYTAC 677
RGLFI+IHDRGH+ASVLNAWPEDVIKA+VVTDGERILGLGDLGCNGMGIPVGKLALYTAC
Sbjct: 121 RGLFITIHDRGHIASVLNAWPEDVIKAIVVTDGERILGLGDLGCNGMGIPVGKLALYTAC 180
Query: 678 GGVNPQECLPVILDVGTENEELLKDPLYIGLRQRRVRGPEYDDFLDEFMEAVSSKYGMNC 857
GG+NPQECLPVILDVGTENEELLKDPLYIGLRQRRVRG EYDDFLDEFMEAVSSKYGMNC
Sbjct: 181 GGMNPQECLPVILDVGTENEELLKDPLYIGLRQRRVRGSEYDDFLDEFMEAVSSKYGMNC 240
Query: 858 LIQFEDFANINAFRLLKKYQNQYCTFNDDIQGTASVAVAGILAALRITKNKLSDQTILFQ 1037
LIQFEDFAN+NAFRLL KY+NQYCTFNDDIQGTASVAVAG+LAALRITKNKLSDQTILFQ
Sbjct: 241 LIQFEDFANVNAFRLLNKYRNQYCTFNDDIQGTASVAVAGLLAALRITKNKLSDQTILFQ 300
Query: 1038 GAGEAALGIAHLIVMAMEKEGVPKEKAIKKIWLVDSKGLIVKGRAALTNXXXXXXXXXXX 1217
GAGEAALGIAHLIVMA+EKEG+PKEKAIKKIWLVDSKGLIVKGRA+LT
Sbjct: 301 GAGEAALGIAHLIVMALEKEGLPKEKAIKKIWLVDSKGLIVKGRASLTQEKEKFAHEHEE 360
Query: 1218 MKNLEAIVQDIKPTALIGVAAIGGAFSEQILKDMAAFNERPIIFALSNPTSKAECTAEQC 1397
MKNLEAIVQ+IKPTALIGVAAIGGAFSEQILKDMAAFNERPIIFALSNPTSKAEC+AEQC
Sbjct: 361 MKNLEAIVQEIKPTALIGVAAIGGAFSEQILKDMAAFNERPIIFALSNPTSKAECSAEQC 420
Query: 1398 YTLTQGRAIFASGSPFDPVTLPSGQTLYPGQGNNSYVFPGVALGVVACGLRHITDKILLT 1577
Y +T+GRAIFASGSPFDPVTLP+GQTLYPGQGNNSYVFPGVALGVVACGLR ITD I LT
Sbjct: 421 YKITKGRAIFASGSPFDPVTLPNGQTLYPGQGNNSYVFPGVALGVVACGLRQITDNIFLT 480
Query: 1578 TAEVIAQQVSDKHLEEGRLYPPLNTIRDVSLKIAEKIVRDAYQEKTATIYPEPSNKEAFV 1757
TAEVIAQQVSDKHLEEGRLYPPLNTIRDVSLKIAEKIV+DAYQEKTAT+YPEP NKEAFV
Sbjct: 481 TAEVIAQQVSDKHLEEGRLYPPLNTIRDVSLKIAEKIVKDAYQEKTATVYPEPQNKEAFV 540
Query: 1758 RSQMYSTDYDQILPDGYSWPEEAQKIQTKLD 1850
RSQMYSTDYDQILPD YSWPEE QKIQTK+D
Sbjct: 541 RSQMYSTDYDQILPDCYSWPEEVQKIQTKVD 571
>ref|NP_001014811.1| malic enzyme 3, NADP(+)-dependent, mitochondrial [Homo sapiens]
Length = 604
Score = 835 bits (2157), Expect = 0.0
Identities = 406/585 (69%), Positives = 488/585 (83%)
Frame = +3
Query: 87 GSIRPLSPVPPRQRQPAMEPRAPRRRHTLQRGYAVTRIPHLNKDLAFTLEERQQLNIHGL 266
G++ +P P Q + +P R +RGY VTR PHLNK +AFTLEER QL IHGL
Sbjct: 20 GALPRWTPTAPAQGCHS-KPGPARPVPLKKRGYDVTRNPHLNKGMAFTLEERLQLGIHGL 78
Query: 267 LPPCFISQDIQVLRVIKNFERLNSDFDRYLLLMDLQDRNEKLFYKVLMSDIEKFMPIVYT 446
+PPCF+SQD+Q+LR+++ +ER SD D+Y++LM LQDRNEKLFY+VL SD+EKFMPIVYT
Sbjct: 79 IPPCFLSQDVQLLRIMRYYERQQSDLDKYIILMTLQDRNEKLFYRVLTSDVEKFMPIVYT 138
Query: 447 PTVGLACQQYSLAFRKPRGLFISIHDRGHVASVLNAWPEDVIKAVVVTDGERILGLGDLG 626
PTVGLACQ Y L FR+PRGLFI+IHD+GH+A++LN+WPED IKAVVVTDGERILGLGDLG
Sbjct: 139 PTVGLACQHYGLTFRRPRGLFITIHDKGHLATMLNSWPEDNIKAVVVTDGERILGLGDLG 198
Query: 627 CNGMGIPVGKLALYTACGGVNPQECLPVILDVGTENEELLKDPLYIGLRQRRVRGPEYDD 806
C GMGIPVGKLALYTACGGVNPQ+CLPV+LDVGT NEELL+DPLYIGL+ +RV G YDD
Sbjct: 199 CYGMGIPVGKLALYTACGGVNPQQCLPVLLDVGTNNEELLRDPLYIGLKHQRVHGKAYDD 258
Query: 807 FLDEFMEAVSSKYGMNCLIQFEDFANINAFRLLKKYQNQYCTFNDDIQGTASVAVAGILA 986
LDEFM+AV+ K+G+NCLIQFEDFAN NAFRLL KY+N+YC FNDDIQGTASVAVAGILA
Sbjct: 259 LLDEFMQAVTDKFGINCLIQFEDFANANAFRLLNKYRNKYCMFNDDIQGTASVAVAGILA 318
Query: 987 ALRITKNKLSDQTILFQGAGEAALGIAHLIVMAMEKEGVPKEKAIKKIWLVDSKGLIVKG 1166
ALRITKNKLS+ +FQGAGEAA+GIAHL+VMA+EKEGVPK +A +KIW+VDSKGLIVKG
Sbjct: 319 ALRITKNKLSNHVFVFQGAGEAAMGIAHLLVMALEKEGVPKAEATRKIWMVDSKGLIVKG 378
Query: 1167 RAALTNXXXXXXXXXXXMKNLEAIVQDIKPTALIGVAAIGGAFSEQILKDMAAFNERPII 1346
R+ L + + +LE +V+ +KPTA+IGVAAI GAF+EQIL+DMA+F+ERPII
Sbjct: 379 RSHLNHEKEMFAQDHPEVNSLEEVVRLVKPTAIIGVAAIAGAFTEQILRDMASFHERPII 438
Query: 1347 FALSNPTSKAECTAEQCYTLTQGRAIFASGSPFDPVTLPSGQTLYPGQGNNSYVFPGVAL 1526
FALSNPTSKAECTAE+CY +T+GR IFASGSPF VTL G+T PGQGNN+YVFPGVAL
Sbjct: 439 FALSNPTSKAECTAEKCYRVTEGRGIFASGSPFKSVTLEDGKTFIPGQGNNAYVFPGVAL 498
Query: 1527 GVVACGLRHITDKILLTTAEVIAQQVSDKHLEEGRLYPPLNTIRDVSLKIAEKIVRDAYQ 1706
GV+A G+RHI D+I L TAE IAQ+VS++HL +GRLYPPL+TIRDVSL+IA K++ AY+
Sbjct: 499 GVIAGGIRHIPDEIFLLTAEQIAQEVSEQHLSQGRLYPPLSTIRDVSLRIAIKVLDYAYK 558
Query: 1707 EKTATIYPEPSNKEAFVRSQMYSTDYDQILPDGYSWPEEAQKIQT 1841
A+ YPEP +KEAFVRS +Y+ DYD D Y+WP+EA +QT
Sbjct: 559 HNLASYYPEPKDKEAFVRSLVYTPDYDSFTLDSYTWPKEAMNVQT 603
>ref|NP_006671.2| malic enzyme 3, NADP(+)-dependent, mitochondrial [Homo sapiens]
Length = 604
Score = 835 bits (2157), Expect = 0.0
Identities = 406/585 (69%), Positives = 488/585 (83%)
Frame = +3
Query: 87 GSIRPLSPVPPRQRQPAMEPRAPRRRHTLQRGYAVTRIPHLNKDLAFTLEERQQLNIHGL 266
G++ +P P Q + +P R +RGY VTR PHLNK +AFTLEER QL IHGL
Sbjct: 20 GALPRWTPTAPAQGCHS-KPGPARPVPLKKRGYDVTRNPHLNKGMAFTLEERLQLGIHGL 78
Query: 267 LPPCFISQDIQVLRVIKNFERLNSDFDRYLLLMDLQDRNEKLFYKVLMSDIEKFMPIVYT 446
+PPCF+SQD+Q+LR+++ +ER SD D+Y++LM LQDRNEKLFY+VL SD+EKFMPIVYT
Sbjct: 79 IPPCFLSQDVQLLRIMRYYERQQSDLDKYIILMTLQDRNEKLFYRVLTSDVEKFMPIVYT 138
Query: 447 PTVGLACQQYSLAFRKPRGLFISIHDRGHVASVLNAWPEDVIKAVVVTDGERILGLGDLG 626
PTVGLACQ Y L FR+PRGLFI+IHD+GH+A++LN+WPED IKAVVVTDGERILGLGDLG
Sbjct: 139 PTVGLACQHYGLTFRRPRGLFITIHDKGHLATMLNSWPEDNIKAVVVTDGERILGLGDLG 198
Query: 627 CNGMGIPVGKLALYTACGGVNPQECLPVILDVGTENEELLKDPLYIGLRQRRVRGPEYDD 806
C GMGIPVGKLALYTACGGVNPQ+CLPV+LDVGT NEELL+DPLYIGL+ +RV G YDD
Sbjct: 199 CYGMGIPVGKLALYTACGGVNPQQCLPVLLDVGTNNEELLRDPLYIGLKHQRVHGKAYDD 258
Query: 807 FLDEFMEAVSSKYGMNCLIQFEDFANINAFRLLKKYQNQYCTFNDDIQGTASVAVAGILA 986
LDEFM+AV+ K+G+NCLIQFEDFAN NAFRLL KY+N+YC FNDDIQGTASVAVAGILA
Sbjct: 259 LLDEFMQAVTDKFGINCLIQFEDFANANAFRLLNKYRNKYCMFNDDIQGTASVAVAGILA 318
Query: 987 ALRITKNKLSDQTILFQGAGEAALGIAHLIVMAMEKEGVPKEKAIKKIWLVDSKGLIVKG 1166
ALRITKNKLS+ +FQGAGEAA+GIAHL+VMA+EKEGVPK +A +KIW+VDSKGLIVKG
Sbjct: 319 ALRITKNKLSNHVFVFQGAGEAAMGIAHLLVMALEKEGVPKAEATRKIWMVDSKGLIVKG 378
Query: 1167 RAALTNXXXXXXXXXXXMKNLEAIVQDIKPTALIGVAAIGGAFSEQILKDMAAFNERPII 1346
R+ L + + +LE +V+ +KPTA+IGVAAI GAF+EQIL+DMA+F+ERPII
Sbjct: 379 RSHLNHEKEMFAQDHPEVNSLEEVVRLVKPTAIIGVAAIAGAFTEQILRDMASFHERPII 438
Query: 1347 FALSNPTSKAECTAEQCYTLTQGRAIFASGSPFDPVTLPSGQTLYPGQGNNSYVFPGVAL 1526
FALSNPTSKAECTAE+CY +T+GR IFASGSPF VTL G+T PGQGNN+YVFPGVAL
Sbjct: 439 FALSNPTSKAECTAEKCYRVTEGRGIFASGSPFKSVTLEDGKTFIPGQGNNAYVFPGVAL 498
Query: 1527 GVVACGLRHITDKILLTTAEVIAQQVSDKHLEEGRLYPPLNTIRDVSLKIAEKIVRDAYQ 1706
GV+A G+RHI D+I L TAE IAQ+VS++HL +GRLYPPL+TIRDVSL+IA K++ AY+
Sbjct: 499 GVIAGGIRHIPDEIFLLTAEQIAQEVSEQHLSQGRLYPPLSTIRDVSLRIAIKVLDYAYK 558
Query: 1707 EKTATIYPEPSNKEAFVRSQMYSTDYDQILPDGYSWPEEAQKIQT 1841
A+ YPEP +KEAFVRS +Y+ DYD D Y+WP+EA +QT
Sbjct: 559 HNLASYYPEPKDKEAFVRSLVYTPDYDSFTLDSYTWPKEAMNVQT 603
>ref|NP_002387.1| malic enzyme 2, NAD(+)-dependent, mitochondrial [Homo sapiens]
Length = 584
Score = 645 bits (1664), Expect = 0.0
Identities = 310/562 (55%), Positives = 404/562 (71%), Gaps = 3/562 (0%)
Frame = +3
Query: 150 APRRRHTLQRGYAVTRIPHLNKDLAFTLEERQQLNIHGLLPPCFISQDIQVLRVIKNFER 329
A R H ++G + P NK +AFTL+ERQ L + GLLPP +QDIQ LR +N ++
Sbjct: 15 ACRHLHIKEKGKPLMLNPRTNKGMAFTLQERQMLGLQGLLPPKIETQDIQALRFHRNLKK 74
Query: 330 LNSDFDRYLLLMDLQDRNEKLFYKVLMSDIEKFMPIVYTPTVGLACQQYSLAFRKPRGLF 509
+ S ++Y+ +M +Q+RNEKLFY++L DIE MPIVYTPTVGLAC QY FR+P+GLF
Sbjct: 75 MTSPLEKYIYIMGIQERNEKLFYRILQDDIESLMPIVYTPTVGLACSQYGHIFRRPKGLF 134
Query: 510 ISIHDRGHVASVLNAWPEDVIKAVVVTDGERILGLGDLGCNGMGIPVGKLALYTACGGVN 689
ISI DRGHV S+++ WPE+ +KAVVVTDGERILGLGDLG GMGIPVGKL LYTAC G+
Sbjct: 135 ISISDRGHVRSIVDNWPENHVKAVVVTDGERILGLGDLGVYGMGIPVGKLCLYTACAGIR 194
Query: 690 PQECLPVILDVGTENEELLKDPLYIGLRQRRVRGPEYDDFLDEFMEAVSSKYGMNCLIQF 869
P CLPV +DVGT+N LLKDP Y+GL Q+R R +YDD +DEFM+A++ +YG N LIQF
Sbjct: 195 PDRCLPVCIDVGTDNIALLKDPFYMGLYQKRDRTQQYDDLIDEFMKAITDRYGRNTLIQF 254
Query: 870 EDFANINAFRLLKKYQNQYCTFNDDIQGTASVAVAGILAALRITKNKLSDQTILFQGAGE 1049
EDF N NAFR L+KY+ +YCTFNDDIQGTA+VA+AG+LAA ++ +S+ ILF GAGE
Sbjct: 255 EDFGNHNAFRFLRKYREKYCTFNDDIQGTAAVALAGLLAAQKVISKPISEHKILFLGAGE 314
Query: 1050 AALGIAHLIVMAMEKEGVPKEKAIKKIWLVDSKGLIVKGRAALTNXX---XXXXXXXXXM 1220
AALGIA+LIVM+M + G+ +++A KKIW+ D GL+VKGR A +
Sbjct: 315 AALGIANLIVMSMVENGLSEQEAQKKIWMFDKYGLLVKGRKAKIDSYQEPFTHSAPESIP 374
Query: 1221 KNLEAIVQDIKPTALIGVAAIGGAFSEQILKDMAAFNERPIIFALSNPTSKAECTAEQCY 1400
E V +KP+ +IGVA G F+ +++ MA+ NERP+IFALSNPT++AECTAE+ Y
Sbjct: 375 DTFEDAVNILKPSTIIGVAGAGRLFTPDVIRAMASINERPVIFALSNPTAQAECTAEEAY 434
Query: 1401 TLTQGRAIFASGSPFDPVTLPSGQTLYPGQGNNSYVFPGVALGVVACGLRHITDKILLTT 1580
TLT+GR +FASGSPF PV L G+ PGQGNN Y+FPGVAL V+ C RHI+D + L
Sbjct: 435 TLTEGRCLFASGSPFGPVKLTDGRVFTPGQGNNVYIFPGVALAVILCNTRHISDSVFLEA 494
Query: 1581 AEVIAQQVSDKHLEEGRLYPPLNTIRDVSLKIAEKIVRDAYQEKTATIYPEPSNKEAFVR 1760
A+ + Q++D+ L +GRLYPPL I++VS+ IA K+ Y K A YPEP +K +V+
Sbjct: 495 AKALTSQLTDEELAQGRLYPPLANIQEVSINIAIKVTEYLYANKMAFRYPEPEDKAKYVK 554
Query: 1761 SQMYSTDYDQILPDGYSWPEEA 1826
+ + ++YD +LPD Y WPE A
Sbjct: 555 ERTWRSEYDSLLPDVYEWPESA 576
>ref|XP_934770.1| PREDICTED: similar to NAD-dependent malic enzyme, mitochondrial
precursor (NAD-ME) (Malic enzyme 2) [Homo sapiens]
Length = 196
Score = 239 bits (610), Expect = 7e-63
Identities = 112/196 (57%), Positives = 144/196 (73%)
Frame = +3
Query: 330 LNSDFDRYLLLMDLQDRNEKLFYKVLMSDIEKFMPIVYTPTVGLACQQYSLAFRKPRGLF 509
+ S + Y+ +M +Q+RN+KLFY++L D E MPI YTPTVGL C Q FR+P+GLF
Sbjct: 1 MTSPSENYIYIMGIQERNDKLFYRILQDDTESLMPIAYTPTVGLVCSQCGHLFRRPKGLF 60
Query: 510 ISIHDRGHVASVLNAWPEDVIKAVVVTDGERILGLGDLGCNGMGIPVGKLALYTACGGVN 689
ISI DRGHV S+++ WPE+ +KAV+VTDGERILG GDLG GMGIPVGK+ LYT C G+
Sbjct: 61 ISISDRGHVRSIVDKWPENHVKAVLVTDGERILGHGDLGVYGMGIPVGKICLYTVCPGIW 120
Query: 690 PQECLPVILDVGTENEELLKDPLYIGLRQRRVRGPEYDDFLDEFMEAVSSKYGMNCLIQF 869
P CL V +DVG +N LLK Y+GL Q+R R + DD +DEFM+A++ +YG N L+QF
Sbjct: 121 PDRCLLVCIDVGADNIALLKGTFYMGLYQKRDRTQQSDDPIDEFMKAITDRYGWNTLLQF 180
Query: 870 EDFANINAFRLLKKYQ 917
E F + NAFR L+KYQ
Sbjct: 181 EGFGHHNAFRFLRKYQ 196
>ref|XP_944182.1| PREDICTED: similar to NAD-dependent malic enzyme, mitochondrial
precursor (NAD-ME) (Malic enzyme 2) [Homo sapiens]
Length = 196
Score = 239 bits (610), Expect = 7e-63
Identities = 112/196 (57%), Positives = 144/196 (73%)
Frame = +3
Query: 330 LNSDFDRYLLLMDLQDRNEKLFYKVLMSDIEKFMPIVYTPTVGLACQQYSLAFRKPRGLF 509
+ S + Y+ +M +Q+RN+KLFY++L D E MPI YTPTVGL C Q FR+P+GLF
Sbjct: 1 MTSPSENYIYIMGIQERNDKLFYRILQDDTESLMPIAYTPTVGLVCSQCGHLFRRPKGLF 60
Query: 510 ISIHDRGHVASVLNAWPEDVIKAVVVTDGERILGLGDLGCNGMGIPVGKLALYTACGGVN 689
ISI DRGHV S+++ WPE+ +KAV+VTDGERILG GDLG GMGIPVGK+ LYT C G+
Sbjct: 61 ISISDRGHVRSIVDKWPENHVKAVLVTDGERILGHGDLGVYGMGIPVGKICLYTVCPGIW 120
Query: 690 PQECLPVILDVGTENEELLKDPLYIGLRQRRVRGPEYDDFLDEFMEAVSSKYGMNCLIQF 869
P CL V +DVG +N LLK Y+GL Q+R R + DD +DEFM+A++ +YG N L+QF
Sbjct: 121 PDRCLLVCIDVGADNIALLKGTFYMGLYQKRDRTQQSDDPIDEFMKAITDRYGWNTLLQF 180
Query: 870 EDFANINAFRLLKKYQ 917
E F + NAFR L+KYQ
Sbjct: 181 EGFGHHNAFRFLRKYQ 196
Database: RefSeqHP
Posted date: Aug 2, 2006 12:57 AM
Number of letters in database: 17,774,539
Number of sequences in database: 39,411
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 75,758,260
Number of Sequences: 39411
Number of extensions: 1915497
Number of successful extensions: 5801
Number of sequences better than 1.0e-05: 6
Number of HSP's better than 0.0 without gapping: 4948
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5790
length of database: 17,774,539
effective HSP length: 109
effective length of database: 13,478,740
effective search space used: 8451169980
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
Search to RefSeqMP
BLASTX 2.2.10 [Oct-19-2004]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= LVRM1_0151_G04
(2212 letters)
Database: RefSeqMP
45,328 sequences; 21,768,885 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_032641.1| malic enzyme, supernatant [Mus musculus] 1004 0.0
Alignment gi|XP_001004685.1| PREDICTED: similar to NADP-dependent malic e... 967 0.0
Alignment gi|XP_001004679.1| PREDICTED: similar to NADP-dependent malic e... 945 0.0
Alignment gi|NP_852072.1| malic enzyme 3, NADP(+)-dependent, mitochondria... 832 0.0
Alignment gi|XP_001004683.1| PREDICTED: similar to NADP-dependent malic e... 696 0.0
Alignment gi|NP_663469.1| malic enzyme 2, NAD(+)-dependent, mitochondrial... 640 0.0
Alignment gi|XP_001004682.1| PREDICTED: similar to NADP-dependent malic e... 422 e-118
Alignment gi|XP_001004303.1| PREDICTED: similar to NADP-dependent malic e... 114 3e-25
>ref|NP_032641.1| malic enzyme, supernatant [Mus musculus]
Length = 572
Score = 1004 bits (2595), Expect = 0.0
Identities = 493/571 (86%), Positives = 529/571 (92%)
Frame = +3
Query: 138 MEPRAPRRRHTLQRGYAVTRIPHLNKDLAFTLEERQQLNIHGLLPPCFISQDIQVLRVIK 317
MEPRAPRRRHT QRGY +TR PHLNKDLAFTLEERQQLNIHGLLPPC ISQ++QVLR+IK
Sbjct: 1 MEPRAPRRRHTHQRGYLLTRDPHLNKDLAFTLEERQQLNIHGLLPPCIISQELQVLRIIK 60
Query: 318 NFERLNSDFDRYLLLMDLQDRNEKLFYKVLMSDIEKFMPIVYTPTVGLACQQYSLAFRKP 497
NFERLNSDFDRYLLLMDLQDRNEKLFY VLMSD+EKFMPIVYTPTVGLACQQYSLAFRKP
Sbjct: 61 NFERLNSDFDRYLLLMDLQDRNEKLFYSVLMSDVEKFMPIVYTPTVGLACQQYSLAFRKP 120
Query: 498 RGLFISIHDRGHVASVLNAWPEDVIKAVVVTDGERILGLGDLGCNGMGIPVGKLALYTAC 677
RGLFISIHD+GH+ASVLNAWPEDV+KA+VVTDGERILGLGDLGCNGMGIPVGKLALYTAC
Sbjct: 121 RGLFISIHDKGHIASVLNAWPEDVVKAIVVTDGERILGLGDLGCNGMGIPVGKLALYTAC 180
Query: 678 GGVNPQECLPVILDVGTENEELLKDPLYIGLRQRRVRGPEYDDFLDEFMEAVSSKYGMNC 857
GGVNPQ+CLP+ LDVGTENEELLKDPLYIGLR RRVRGPEYD FLDEFMEA SSKYGMNC
Sbjct: 181 GGVNPQQCLPITLDVGTENEELLKDPLYIGLRHRRVRGPEYDAFLDEFMEAASSKYGMNC 240
Query: 858 LIQFEDFANINAFRLLKKYQNQYCTFNDDIQGTASVAVAGILAALRITKNKLSDQTILFQ 1037
LIQFEDFAN NAFRLL KY+N+YCTFNDDIQGTASVAVAG+LAALRITKNKLSDQT+LFQ
Sbjct: 241 LIQFEDFANRNAFRLLNKYRNKYCTFNDDIQGTASVAVAGLLAALRITKNKLSDQTVLFQ 300
Query: 1038 GAGEAALGIAHLIVMAMEKEGVPKEKAIKKIWLVDSKGLIVKGRAALTNXXXXXXXXXXX 1217
GAGEAALGIAHL+VMAMEKEG+ KE A KKIWLVDSKGLIVKGRA+LT
Sbjct: 301 GAGEAALGIAHLVVMAMEKEGLSKENARKKIWLVDSKGLIVKGRASLTEEKEVFAHEHEE 360
Query: 1218 MKNLEAIVQDIKPTALIGVAAIGGAFSEQILKDMAAFNERPIIFALSNPTSKAECTAEQC 1397
MKNLEAIVQ IKPTALIGVAAIGGAF+EQILKDMAAFNERPIIFALS+PTSKAEC+A++C
Sbjct: 361 MKNLEAIVQKIKPTALIGVAAIGGAFTEQILKDMAAFNERPIIFALSSPTSKAECSADEC 420
Query: 1398 YTLTQGRAIFASGSPFDPVTLPSGQTLYPGQGNNSYVFPGVALGVVACGLRHITDKILLT 1577
Y +T+GRAIFASGSPFDPVTLP G+TL+PGQGNNSYVFPGVALGVVACGLRHI DK+ LT
Sbjct: 421 YKVTKGRAIFASGSPFDPVTLPDGRTLFPGQGNNSYVFPGVALGVVACGLRHIDDKVFLT 480
Query: 1578 TAEVIAQQVSDKHLEEGRLYPPLNTIRDVSLKIAEKIVRDAYQEKTATIYPEPSNKEAFV 1757
T EVI+QQVSDKHL+EGRLYPPLNTIR VSLKIA KIV+DAY+EK AT+YPEP NKE FV
Sbjct: 481 TREVISQQVSDKHLQEGRLYPPLNTIRGVSLKIAVKIVQDAYKEKMATVYPEPQNKEEFV 540
Query: 1758 RSQMYSTDYDQILPDGYSWPEEAQKIQTKLD 1850
SQMYST+YDQILPD Y WP E QKIQTK++
Sbjct: 541 SSQMYSTNYDQILPDCYPWPAEVQKIQTKVN 571
>ref|XP_001004685.1| PREDICTED: similar to NADP-dependent malic enzyme (NADP-ME) (Malic
enzyme 1) isoform 4 [Mus musculus]
Length = 552
Score = 967 bits (2501), Expect = 0.0
Identities = 476/546 (87%), Positives = 509/546 (93%)
Frame = +3
Query: 213 KDLAFTLEERQQLNIHGLLPPCFISQDIQVLRVIKNFERLNSDFDRYLLLMDLQDRNEKL 392
+DLAFTLEERQQLNIHGLLPPC ISQ++QVLR+IKNFERLNSDFDRYLLLMDLQDRNEKL
Sbjct: 6 EDLAFTLEERQQLNIHGLLPPCIISQELQVLRIIKNFERLNSDFDRYLLLMDLQDRNEKL 65
Query: 393 FYKVLMSDIEKFMPIVYTPTVGLACQQYSLAFRKPRGLFISIHDRGHVASVLNAWPEDVI 572
FY VLMSD+EKFMPIVYTPTVGLACQQYSLAFRKPRGLFISIHD+GH+ASVLNAWPEDV+
Sbjct: 66 FYSVLMSDVEKFMPIVYTPTVGLACQQYSLAFRKPRGLFISIHDKGHIASVLNAWPEDVV 125
Query: 573 KAVVVTDGERILGLGDLGCNGMGIPVGKLALYTACGGVNPQECLPVILDVGTENEELLKD 752
KA+VVTDGERILGLGDLGCNGMGIPVGKLALYTACGGVNPQ+CLP+ LDVGTENEELLKD
Sbjct: 126 KAIVVTDGERILGLGDLGCNGMGIPVGKLALYTACGGVNPQQCLPITLDVGTENEELLKD 185
Query: 753 PLYIGLRQRRVRGPEYDDFLDEFMEAVSSKYGMNCLIQFEDFANINAFRLLKKYQNQYCT 932
PLYIGLR RRVRGPEYD FLDEFMEA SSKYGMNCLIQFEDFAN NAFRLL KY+N+YCT
Sbjct: 186 PLYIGLRHRRVRGPEYDAFLDEFMEAASSKYGMNCLIQFEDFANRNAFRLLNKYRNKYCT 245
Query: 933 FNDDIQGTASVAVAGILAALRITKNKLSDQTILFQGAGEAALGIAHLIVMAMEKEGVPKE 1112
FNDDIQGTASVAVAG+LAALRITKNKLSDQT+LFQGAGEAALGIAHL+VMAMEKEG+ KE
Sbjct: 246 FNDDIQGTASVAVAGLLAALRITKNKLSDQTVLFQGAGEAALGIAHLVVMAMEKEGLSKE 305
Query: 1113 KAIKKIWLVDSKGLIVKGRAALTNXXXXXXXXXXXMKNLEAIVQDIKPTALIGVAAIGGA 1292
A KKIWLVDSKGLIVKGRA+LT MKNLEAIVQ IKPTALIGVAAIGGA
Sbjct: 306 NARKKIWLVDSKGLIVKGRASLTEEKEVFAHEHEEMKNLEAIVQKIKPTALIGVAAIGGA 365
Query: 1293 FSEQILKDMAAFNERPIIFALSNPTSKAECTAEQCYTLTQGRAIFASGSPFDPVTLPSGQ 1472
F+EQILKDMAAFNERPIIFALSNPTSKAEC+AEQCY +T+GRAIFASGSPFDPVTLP G+
Sbjct: 366 FTEQILKDMAAFNERPIIFALSNPTSKAECSAEQCYKVTKGRAIFASGSPFDPVTLPDGR 425
Query: 1473 TLYPGQGNNSYVFPGVALGVVACGLRHITDKILLTTAEVIAQQVSDKHLEEGRLYPPLNT 1652
TL+PGQGNNSYVFPGVALGVVACGLRHI DK+ LTTAEVI+QQVSDKHL+EGRLYPPLNT
Sbjct: 426 TLFPGQGNNSYVFPGVALGVVACGLRHIDDKVFLTTAEVISQQVSDKHLQEGRLYPPLNT 485
Query: 1653 IRDVSLKIAEKIVRDAYQEKTATIYPEPSNKEAFVRSQMYSTDYDQILPDGYSWPEEAQK 1832
IRDVSLKIA KIV+DAY+EK AT+YPEP NKE FV SQMYST+YDQILPD Y WP E QK
Sbjct: 486 IRDVSLKIAVKIVQDAYKEKMATVYPEPQNKEEFVSSQMYSTNYDQILPDCYPWPAEVQK 545
Query: 1833 IQTKLD 1850
IQTK++
Sbjct: 546 IQTKVN 551
>ref|XP_001004679.1| PREDICTED: similar to NADP-dependent malic enzyme (NADP-ME) (Malic
enzyme 1) isoform 1 [Mus musculus]
Length = 554
Score = 945 bits (2442), Expect = 0.0
Identities = 468/548 (85%), Positives = 502/548 (91%), Gaps = 2/548 (0%)
Frame = +3
Query: 213 KDLAFTLEERQQLNIHGLLPPCFISQDIQVLRVIKNFERLNSDFDRYLLLMDLQDRNEKL 392
+DLAFTLEERQQLNIHGLLPPC ISQ++QVLR+IKNFERLNSDFDRYLLLMDLQDRNEKL
Sbjct: 6 EDLAFTLEERQQLNIHGLLPPCIISQELQVLRIIKNFERLNSDFDRYLLLMDLQDRNEKL 65
Query: 393 FYKVLMSDIEKFMPIVYTPTVGLACQQYSLAFRKPRGLFISIHDRGHVASVLNAWPEDVI 572
FY VLMSD+EKFMPIVYTPTVGLACQQYSLAFRKPRGLFISIHD+GH+ASVLNAWPEDV+
Sbjct: 66 FYSVLMSDVEKFMPIVYTPTVGLACQQYSLAFRKPRGLFISIHDKGHIASVLNAWPEDVV 125
Query: 573 KAVVVTDGERILGLGDLGCNGMGIPVGKLALYTACGGVNPQECLPVILDVGTENEELLKD 752
KA+VVTDGERILGLGDLGCNGMGIPVGKLALYTACGGVNPQ+CLP+ LDVGTENEELLKD
Sbjct: 126 KAIVVTDGERILGLGDLGCNGMGIPVGKLALYTACGGVNPQQCLPITLDVGTENEELLKD 185
Query: 753 PLYIGLRQRRVRGPEYDDFLDEFMEAVSSKYGMNCLIQFEDFANINAFRLLKKYQNQYCT 932
PLYIGLR RRVRGPEYD FLDEFMEA SSKYGMNCLIQFEDFAN NAFRLL KY+N+YCT
Sbjct: 186 PLYIGLRHRRVRGPEYDAFLDEFMEAASSKYGMNCLIQFEDFANRNAFRLLNKYRNKYCT 245
Query: 933 FNDDIQGTASVAVAGILAALRITKNKLSDQTILFQGAGEAALGIAHLIVMAMEKEGVPKE 1112
FNDDIQGTASVAVAG+LAALRITKNKLSDQT+LFQGAGEAALGIAHL+VMAMEKEG+ KE
Sbjct: 246 FNDDIQGTASVAVAGLLAALRITKNKLSDQTVLFQGAGEAALGIAHLVVMAMEKEGLSKE 305
Query: 1113 KAIKKIWLVDSKGLIVKGRAALTNXX--XXXXXXXXXMKNLEAIVQDIKPTALIGVAAIG 1286
A KKIWLVDSKGLIVK R +T NLEAIVQ IKPTALIGVAAIG
Sbjct: 306 NARKKIWLVDSKGLIVKVRKKVTTYLKPYTGAAPDSLHSNLEAIVQKIKPTALIGVAAIG 365
Query: 1287 GAFSEQILKDMAAFNERPIIFALSNPTSKAECTAEQCYTLTQGRAIFASGSPFDPVTLPS 1466
GAF+EQILKDMAAFNERPIIFALSNPTSKAEC+AEQCY +T+GRAIFASGSPFDPVTLP
Sbjct: 366 GAFTEQILKDMAAFNERPIIFALSNPTSKAECSAEQCYKVTKGRAIFASGSPFDPVTLPD 425
Query: 1467 GQTLYPGQGNNSYVFPGVALGVVACGLRHITDKILLTTAEVIAQQVSDKHLEEGRLYPPL 1646
G+TL+PGQGNNSYVFPGVALGVVACGLRHI DK+ LTTAEVI+QQVSDKHL+EGRLYPPL
Sbjct: 426 GRTLFPGQGNNSYVFPGVALGVVACGLRHIDDKVFLTTAEVISQQVSDKHLQEGRLYPPL 485
Query: 1647 NTIRDVSLKIAEKIVRDAYQEKTATIYPEPSNKEAFVRSQMYSTDYDQILPDGYSWPEEA 1826
NTIRDVSLKIA K+ + AY+EK AT+YPEP NKE FV SQMYST+YDQILPD Y WP E
Sbjct: 486 NTIRDVSLKIAVKVRQYAYKEKMATVYPEPQNKEEFVSSQMYSTNYDQILPDCYPWPAEV 545
Query: 1827 QKIQTKLD 1850
QKIQTK++
Sbjct: 546 QKIQTKVN 553
>ref|NP_852072.1| malic enzyme 3, NADP(+)-dependent, mitochondrial [Mus musculus]
Length = 604
Score = 832 bits (2148), Expect = 0.0
Identities = 404/583 (69%), Positives = 487/583 (83%)
Frame = +3
Query: 90 SIRPLSPVPPRQRQPAMEPRAPRRRHTLQRGYAVTRIPHLNKDLAFTLEERQQLNIHGLL 269
S+R +P P Q + + PR +RGY VTR PHLNK +AFTLEER QL IHGL+
Sbjct: 21 SLRRQAPSAPAQGCHS-KSGPPRPVPLKKRGYDVTRNPHLNKGMAFTLEERLQLGIHGLI 79
Query: 270 PPCFISQDIQVLRVIKNFERLNSDFDRYLLLMDLQDRNEKLFYKVLMSDIEKFMPIVYTP 449
PPCF+SQD+Q+LR+++ +E SD D+Y++LM QDRNEKLFY+VL SD+EKFMPIVYTP
Sbjct: 80 PPCFLSQDVQLLRIMRYYENQQSDLDKYIILMTHQDRNEKLFYRVLTSDVEKFMPIVYTP 139
Query: 450 TVGLACQQYSLAFRKPRGLFISIHDRGHVASVLNAWPEDVIKAVVVTDGERILGLGDLGC 629
TVGLACQ Y L FR+PRGLFI+IHD+GH+A++LN+WPED IKAVVVTDGERILGLGDLGC
Sbjct: 140 TVGLACQHYGLTFRRPRGLFITIHDKGHIATMLNSWPEDNIKAVVVTDGERILGLGDLGC 199
Query: 630 NGMGIPVGKLALYTACGGVNPQECLPVILDVGTENEELLKDPLYIGLRQRRVRGPEYDDF 809
GMGIPVGKLALYTACGGVNPQ+CLPV+LDVGT NEELL+DPLYIGL+ +RVRG EYDD
Sbjct: 200 YGMGIPVGKLALYTACGGVNPQQCLPVLLDVGTNNEELLRDPLYIGLKHQRVRGEEYDDL 259
Query: 810 LDEFMEAVSSKYGMNCLIQFEDFANINAFRLLKKYQNQYCTFNDDIQGTASVAVAGILAA 989
LDEFM+AV+ K+G+NCLIQFEDFAN NAFRLL KY+N+YC FNDDIQGTASVAVAGILAA
Sbjct: 260 LDEFMQAVTDKFGINCLIQFEDFANANAFRLLNKYRNKYCMFNDDIQGTASVAVAGILAA 319
Query: 990 LRITKNKLSDQTILFQGAGEAALGIAHLIVMAMEKEGVPKEKAIKKIWLVDSKGLIVKGR 1169
LRITKN+LS+ +FQGA EAA+GIAHL+VMA+EKEG+PK +AIKKIW+VDSKGLIVKGR
Sbjct: 320 LRITKNRLSNHVFVFQGADEAAMGIAHLLVMALEKEGIPKTEAIKKIWMVDSKGLIVKGR 379
Query: 1170 AALTNXXXXXXXXXXXMKNLEAIVQDIKPTALIGVAAIGGAFSEQILKDMAAFNERPIIF 1349
+ L + + +LE +V+ +KPTA+IGVAAI GAF+EQIL+DMA+F+ERPI+F
Sbjct: 380 SHLNHEKEMFAQDHPEVNSLEEVVRLVKPTAIIGVAAIAGAFTEQILRDMASFHERPIVF 439
Query: 1350 ALSNPTSKAECTAEQCYTLTQGRAIFASGSPFDPVTLPSGQTLYPGQGNNSYVFPGVALG 1529
ALSNPTSKAECTAE+CY +T+GR IFASGSPF VTL G+T PGQGNN+YVFPGVALG
Sbjct: 440 ALSNPTSKAECTAEKCYRVTEGRGIFASGSPFKSVTLEDGRTFTPGQGNNAYVFPGVALG 499
Query: 1530 VVACGLRHITDKILLTTAEVIAQQVSDKHLEEGRLYPPLNTIRDVSLKIAEKIVRDAYQE 1709
V+A G+RHI D+I L TAE IAQ+VS++HL +GRLYPPL+TIRDVSL+IA K++ AY+
Sbjct: 500 VIAGGIRHIPDEIFLLTAEQIAQEVSEQHLSQGRLYPPLSTIRDVSLRIAVKVLDYAYKH 559
Query: 1710 KTATIYPEPSNKEAFVRSQMYSTDYDQILPDGYSWPEEAQKIQ 1838
A+ YPEP +KEAFV+S +Y+ DYD D YSWP+EA +Q
Sbjct: 560 NLASYYPEPKDKEAFVKSLIYTPDYDSFSLDTYSWPKEAMSVQ 602
>ref|XP_001004683.1| PREDICTED: similar to NADP-dependent malic enzyme (NADP-ME) (Malic
enzyme 1) isoform 3 [Mus musculus]
Length = 406
Score = 696 bits (1797), Expect = 0.0
Identities = 346/405 (85%), Positives = 370/405 (91%)
Frame = +3
Query: 636 MGIPVGKLALYTACGGVNPQECLPVILDVGTENEELLKDPLYIGLRQRRVRGPEYDDFLD 815
MGIPVGKLALYTACGGVNPQ+CLP+ LDVGTENEELLKDPLYIGLR RRVRGPEYD FLD
Sbjct: 1 MGIPVGKLALYTACGGVNPQQCLPITLDVGTENEELLKDPLYIGLRHRRVRGPEYDAFLD 60
Query: 816 EFMEAVSSKYGMNCLIQFEDFANINAFRLLKKYQNQYCTFNDDIQGTASVAVAGILAALR 995
EFMEA SSKYGMNCLIQFEDFAN NAFRLL KY+N+YCTFNDDIQGTASVAVAG+LAALR
Sbjct: 61 EFMEAASSKYGMNCLIQFEDFANRNAFRLLNKYRNKYCTFNDDIQGTASVAVAGLLAALR 120
Query: 996 ITKNKLSDQTILFQGAGEAALGIAHLIVMAMEKEGVPKEKAIKKIWLVDSKGLIVKGRAA 1175
ITKNKLSDQT+LFQGAGEAALGIAHL+VMAMEKEG+ KE A KKIWLVDSKGLIVKGRA+
Sbjct: 121 ITKNKLSDQTVLFQGAGEAALGIAHLVVMAMEKEGLSKENARKKIWLVDSKGLIVKGRAS 180
Query: 1176 LTNXXXXXXXXXXXMKNLEAIVQDIKPTALIGVAAIGGAFSEQILKDMAAFNERPIIFAL 1355
LT MKNLEAIVQ IKPTALIGVAAIGGAF+EQILKDMAAFNERPIIFAL
Sbjct: 181 LTEEKEVFAHEHEEMKNLEAIVQKIKPTALIGVAAIGGAFTEQILKDMAAFNERPIIFAL 240
Query: 1356 SNPTSKAECTAEQCYTLTQGRAIFASGSPFDPVTLPSGQTLYPGQGNNSYVFPGVALGVV 1535
SNPTSKAEC+AEQCY +T+GRAIFASGSPFDPVTLP G+TL+PGQGNNSYVFPGVALGVV
Sbjct: 241 SNPTSKAECSAEQCYKVTKGRAIFASGSPFDPVTLPDGRTLFPGQGNNSYVFPGVALGVV 300
Query: 1536 ACGLRHITDKILLTTAEVIAQQVSDKHLEEGRLYPPLNTIRDVSLKIAEKIVRDAYQEKT 1715
ACGLRHI DK+ LTTAEVI+QQVSDKHL+EGRLYPPLNTIRDVSLKIA KIV+DAY+EK
Sbjct: 301 ACGLRHIDDKVFLTTAEVISQQVSDKHLQEGRLYPPLNTIRDVSLKIAVKIVQDAYKEKM 360
Query: 1716 ATIYPEPSNKEAFVRSQMYSTDYDQILPDGYSWPEEAQKIQTKLD 1850
AT+YPEP NKE FV SQMYST+YDQILPD Y WP E QKIQTK++
Sbjct: 361 ATVYPEPQNKEEFVSSQMYSTNYDQILPDCYPWPAEVQKIQTKVN 405
>ref|NP_663469.1| malic enzyme 2, NAD(+)-dependent, mitochondrial [Mus musculus]
Length = 589
Score = 640 bits (1651), Expect = 0.0
Identities = 310/560 (55%), Positives = 403/560 (71%), Gaps = 3/560 (0%)
Frame = +3
Query: 156 RRRHTLQRGYAVTRIPHLNKDLAFTLEERQQLNIHGLLPPCFISQDIQVLRVIKNFERLN 335
RR H ++G + P NK +AFTL+ERQ L + GLLPP +QDIQ LR +N +++
Sbjct: 17 RRVHLKEKGKPLMLNPRTNKGMAFTLQERQMLGLQGLLPPKIETQDIQALRFHRNLKKMT 76
Query: 336 SDFDRYLLLMDLQDRNEKLFYKVLMSDIEKFMPIVYTPTVGLACQQYSLAFRKPRGLFIS 515
S ++Y+ +M +Q+RNEKLFY++L DIE MPIVYTPTVGLAC QY FR+P+GLFIS
Sbjct: 77 SPLEKYIYIMGIQERNEKLFYRILQDDIESLMPIVYTPTVGLACCQYGHIFRRPKGLFIS 136
Query: 516 IHDRGHVASVLNAWPEDVIKAVVVTDGERILGLGDLGCNGMGIPVGKLALYTACGGVNPQ 695
I DRGHV S+++ WPE+ +KAVVVTDGERILGLGDLG GMGIPVGKL LYTAC G+ P+
Sbjct: 137 ISDRGHVRSIVDNWPENHVKAVVVTDGERILGLGDLGVYGMGIPVGKLCLYTACAGIQPE 196
Query: 696 ECLPVILDVGTENEELLKDPLYIGLRQRRVRGPEYDDFLDEFMEAVSSKYGMNCLIQFED 875
+CLPV +DVGT+N LLKDP Y+GL Q+R R YDD +DEFM+A++ +YG N LIQFED
Sbjct: 197 KCLPVCIDVGTDNMALLKDPFYMGLYQKRDRSQLYDDLMDEFMKAITDRYGRNTLIQFED 256
Query: 876 FANINAFRLLKKYQNQYCTFNDDIQGTASVAVAGILAALRITKNKLSDQTILFQGAGEAA 1055
F N NAFR L+KYQ +YCTFNDDIQGTA+VA++G+LAA R+ +S+ ILF GAGEAA
Sbjct: 257 FGNHNAFRFLRKYQQKYCTFNDDIQGTAAVALSGLLAAQRVINKPVSEHKILFLGAGEAA 316
Query: 1056 LGIAHLIVMAMEKEGVPKEKAIKKIWLVDSKGLIVKGRAALTNXX---XXXXXXXXXMKN 1226
LGIA+LIV++M + G+ +E+A +KIW+ D GL+VKGR A +
Sbjct: 317 LGIANLIVLSMVESGLSEEEAQRKIWMFDKSGLLVKGRTASIDSNQEPYAHAAPESIPAT 376
Query: 1227 LEAIVQDIKPTALIGVAAIGGAFSEQILKDMAAFNERPIIFALSNPTSKAECTAEQCYTL 1406
E V +KP+ +IGVA G F+ ++K MA+ NERPIIFALSNPT++AECTAE YTL
Sbjct: 377 FEDAVNKLKPSVIIGVAGAGPLFTHGVIKAMASINERPIIFALSNPTAQAECTAEDAYTL 436
Query: 1407 TQGRAIFASGSPFDPVTLPSGQTLYPGQGNNSYVFPGVALGVVACGLRHITDKILLTTAE 1586
T+GR +FASGSPF+PV L G+ PGQGNN+Y+FPGVAL V+ C RHI+D + L A+
Sbjct: 437 TEGRCLFASGSPFEPVKLQDGRVFTPGQGNNAYIFPGVALAVILCEARHISDTVFLEAAK 496
Query: 1587 VIAQQVSDKHLEEGRLYPPLNTIRDVSLKIAEKIVRDAYQEKTATIYPEPSNKEAFVRSQ 1766
+ Q++D L +GRLYP L I++VS IA K+ Y K A YPEP +K +VR +
Sbjct: 497 ALTTQLTDAELAQGRLYPSLANIQEVSANIAIKLAEYLYANKMAFRYPEPEDKARYVRER 556
Query: 1767 MYSTDYDQILPDGYSWPEEA 1826
++ ++Y +LPD Y WPE +
Sbjct: 557 IWRSNYVSLLPDVYDWPESS 576
>ref|XP_001004682.1| PREDICTED: similar to NADP-dependent malic enzyme (NADP-ME) (Malic
enzyme 1) isoform 2 [Mus musculus]
Length = 258
Score = 422 bits (1085), Expect = e-118
Identities = 211/257 (82%), Positives = 228/257 (88%)
Frame = +3
Query: 1080 MAMEKEGVPKEKAIKKIWLVDSKGLIVKGRAALTNXXXXXXXXXXXMKNLEAIVQDIKPT 1259
MAMEKEG+ KE A KKIWLVDSKGLIVKGRA+LT MKNLEAIVQ IKPT
Sbjct: 1 MAMEKEGLSKENARKKIWLVDSKGLIVKGRASLTEEKEVFAHEHEEMKNLEAIVQKIKPT 60
Query: 1260 ALIGVAAIGGAFSEQILKDMAAFNERPIIFALSNPTSKAECTAEQCYTLTQGRAIFASGS 1439
ALIGVAAIGGAF+EQILKDMAAFNERPIIFALSNPTSKAEC+AEQCY +T+GRAIFASGS
Sbjct: 61 ALIGVAAIGGAFTEQILKDMAAFNERPIIFALSNPTSKAECSAEQCYKVTKGRAIFASGS 120
Query: 1440 PFDPVTLPSGQTLYPGQGNNSYVFPGVALGVVACGLRHITDKILLTTAEVIAQQVSDKHL 1619
PFDPVTLP G+TL+PGQGNNSYVFPGVALGVVACGLRHI DK+ LTTAEVI+QQVSDKHL
Sbjct: 121 PFDPVTLPDGRTLFPGQGNNSYVFPGVALGVVACGLRHIDDKVFLTTAEVISQQVSDKHL 180
Query: 1620 EEGRLYPPLNTIRDVSLKIAEKIVRDAYQEKTATIYPEPSNKEAFVRSQMYSTDYDQILP 1799
+EGRLYPPLNTIRDVSLKIA KIV+DAY+EK AT+YPEP NKE FV SQMYST+YDQILP
Sbjct: 181 QEGRLYPPLNTIRDVSLKIAVKIVQDAYKEKMATVYPEPQNKEEFVSSQMYSTNYDQILP 240
Query: 1800 DGYSWPEEAQKIQTKLD 1850
D Y WP E QKIQTK++
Sbjct: 241 DCYPWPAEVQKIQTKVN 257
>ref|XP_001004303.1| PREDICTED: similar to NADP-dependent malic enzyme (NADP-ME) (Malic
enzyme 1) [Mus musculus]
Length = 66
Score = 114 bits (286), Expect = 3e-25
Identities = 53/60 (88%), Positives = 57/60 (95%)
Frame = +3
Query: 1413 GRAIFASGSPFDPVTLPSGQTLYPGQGNNSYVFPGVALGVVACGLRHITDKILLTTAEVI 1592
GRAIFASGSPFDPVTLP G+TL+PGQGNNSYVFPGVALGVVACGLRHI DK+ LTTAEV+
Sbjct: 7 GRAIFASGSPFDPVTLPDGRTLFPGQGNNSYVFPGVALGVVACGLRHIDDKVFLTTAEVL 66
Database: RefSeqMP
Posted date: Aug 2, 2006 12:58 AM
Number of letters in database: 21,768,885
Number of sequences in database: 45,328
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 91,437,922
Number of Sequences: 45328
Number of extensions: 2292341
Number of successful extensions: 6519
Number of sequences better than 1.0e-05: 8
Number of HSP's better than 0.0 without gapping: 5571
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6504
length of database: 21,768,885
effective HSP length: 111
effective length of database: 16,737,477
effective search space used: 10460923125
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)