Animal-Genome cDNA OVRM1_0112_F03


Search to RefSeqBP

BLASTX 2.2.10 [Oct-19-2004]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= OVRM1_0112_F03
         (1567 letters)

Database: RefSeqBP 
           33,508 sequences; 16,112,626 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|XP_614481.2| PREDICTED: similar to WD-repeat protein 57 isof...   644   0.0  
Alignment   gi|XP_887150.1| PREDICTED: similar to WD-repeat protein 57 isof...   234   1e-61
Alignment   gi|XP_608583.2| PREDICTED: similar to CG7568-PA [Bos taurus]         134   2e-31
Alignment   gi|NP_001033649.1| WD repeat domain 51A [Bos taurus]                 121   2e-27
Alignment   gi|XP_869200.1| PREDICTED: similar to Autophagy protein 16-like...   120   3e-27
Alignment   gi|XP_877191.1| PREDICTED: similar to Autophagy protein 16-like...   120   3e-27
Alignment   gi|XP_877095.1| PREDICTED: similar to Autophagy protein 16-like...   120   3e-27
Alignment   gi|XP_603483.2| PREDICTED: similar to WD repeat domain 51B [Bos...   111   2e-24
Alignment   gi|XP_588289.2| PREDICTED: similar to APG16L beta isoform [Bos ...   110   3e-24
Alignment   gi|NP_777088.1| platelet-activating factor acetylhydrolase, iso...   109   5e-24

>ref|XP_614481.2| PREDICTED: similar to WD-repeat protein 57 isoform 1 [Bos taurus]
          Length = 358

 Score =  644 bits (1660), Expect = 0.0
 Identities = 316/358 (88%), Positives = 316/358 (88%)
 Frame = +2

Query: 32   MIEQQKRKGPELPLVPVKRQRHEXXXXXXXXXXXXXXXXXXXXXXXXXXXXRCSSLQAPI 211
            MIEQQKRKGPELPLVPVKRQRHE                            RCSSLQAPI
Sbjct: 1    MIEQQKRKGPELPLVPVKRQRHELLLGAAGSGPGAGQQQAAPGALLQAGPPRCSSLQAPI 60

Query: 212  MLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNT 391
            MLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNT
Sbjct: 61   MLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNT 120

Query: 392  DGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLW 571
            DGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLW
Sbjct: 121  DGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLW 180

Query: 572  DIRKKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVT 751
            DIRKKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVT
Sbjct: 181  DIRKKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVT 240

Query: 752  XXXXXXXXXXXXXNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSK 931
                         NAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSK
Sbjct: 241  GLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSK 300

Query: 932  IAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEPIILSASSDKRLYTGEIQ 1105
            IAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEPIILSASSDKRLY GEIQ
Sbjct: 301  IAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEPIILSASSDKRLYMGEIQ 358


>ref|XP_887150.1| PREDICTED: similar to WD-repeat protein 57 isoform 2 [Bos taurus]
          Length = 127

 Score =  234 bits (597), Expect = 1e-61
 Identities = 113/127 (88%), Positives = 113/127 (88%)
 Frame = +2

Query: 725  MRGHADSVTXXXXXXXXXXXXXNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLR 904
            MRGHADSVT             NAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLR
Sbjct: 1    MRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLR 60

Query: 905  CSWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEPIILSASSDKR 1084
            CSWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEPIILSASSDKR
Sbjct: 61   CSWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEPIILSASSDKR 120

Query: 1085 LYTGEIQ 1105
            LY GEIQ
Sbjct: 121  LYMGEIQ 127


>ref|XP_608583.2| PREDICTED: similar to CG7568-PA [Bos taurus]
          Length = 441

 Score =  134 bits (338), Expect = 2e-31
 Identities = 80/275 (29%), Positives = 135/275 (49%), Gaps = 2/275 (0%)
 Frame = +2

Query: 263  NGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTD-GSMLFSASTDKTVAV 439
            +GS   +  +DR   LW+     +   TL+GH   V  + +N   G  + + S DKT  +
Sbjct: 129  SGSCFITGSYDRTCKLWDTASG-EELHTLEGHRNVVYAIAFNNPYGDKIATGSFDKTCKL 187

Query: 440  WDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQ-NTY 616
            W  ETG+     +GHT+ +  C        LV TGS D T KLWDI+    + T   ++ 
Sbjct: 188  WSVETGKCYHTFRGHTAEI-VCLSFNPQSTLVATGSMDTTAKLWDIQSGEEVFTLTGHSA 246

Query: 617  QVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTXXXXXXXXXXXXXNA 796
            ++++++FN + ++II+G  D+ + VW+    +  YT+ GH   ++              +
Sbjct: 247  EIISLSFNTSGNRIITGSFDHTVTVWEADTGRKVYTLIGHCAEISSAVFNWDCSLILTGS 306

Query: 797  MDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDT 976
            MD T ++WD    A   +CV    G+    +  +L   +   G  IA  SAD    ++  
Sbjct: 307  MDKTCKLWD----AVNGKCVATLTGH----DDEILDSCFDYTGKLIATASADGTARIFSA 358

Query: 977  TSRRILYKLPGHAGSINEVAFHPDEPIILSASSDK 1081
             +R  + KL GH G I++++F+P    +L+ SSDK
Sbjct: 359  ATRECVTKLEGHEGEISKISFNPQGNRLLTGSSDK 393



 Score =  134 bits (337), Expect = 2e-31
 Identities = 83/290 (28%), Positives = 139/290 (47%), Gaps = 3/290 (1%)
 Frame = +2

Query: 218  LSGHEGEVYCCKFH-PNGSTLASAGFDRLILLWNVY-GDCDNYATLKGHSGAVMELHYNT 391
            L GH   VY   F+ P G  +A+  FD+   LW+V  G C  Y T +GH+  ++ L +N 
Sbjct: 156  LEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSVETGKC--YHTFRGHTAEIVCLSFNP 213

Query: 392  DGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLW 571
              +++ + S D T  +WD ++GE V  L GH++ + S      G +++ TGS D TV +W
Sbjct: 214  QSTLVATGSMDTTAKLWDIQSGEEVFTLTGHSAEIISLSFNTSGNRII-TGSFDHTVTVW 272

Query: 572  DIRKKAAIQTF-QNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSV 748
            +      + T   +  ++ +  FN     I++G +D   K+WD    K   T+ GH D +
Sbjct: 273  EADTGRKVYTLIGHCAEISSAVFNWDCSLILTGSMDKTCKLWDAVNGKCVATLTGHDDEI 332

Query: 749  TXXXXXXXXXXXXXNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGS 928
                           + D T R++     A    CV   +G+    E  + + S++P G+
Sbjct: 333  LDSCFDYTGKLIATASADGTARIFS----AATRECVTKLEGH----EGEISKISFNPQGN 384

Query: 929  KIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEPIILSASSD 1078
            ++  GS+D+   +WD  + + L  L GH   I   AF+    II++ S D
Sbjct: 385  RLLTGSSDKTARIWDAQTGQCLQVLEGHTDEIFSCAFNYKGDIIITGSKD 434



 Score =  113 bits (283), Expect = 4e-25
 Identities = 65/250 (26%), Positives = 113/250 (45%), Gaps = 1/250 (0%)
 Frame = +2

Query: 224 GHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSM 403
           GH  E+ C  F+P  + +A+   D    LW++    +   TL GHS  ++ L +NT G+ 
Sbjct: 201 GHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQSG-EEVFTLTGHSAEIISLSFNTSGNR 259

Query: 404 LFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWD-IR 580
           + + S D TV VW+++TG +V  L GH + ++S         L+ TGS D T KLWD + 
Sbjct: 260 IITGSFDHTVTVWEADTGRKVYTLIGHCAEISSAV-FNWDCSLILTGSMDKTCKLWDAVN 318

Query: 581 KKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTXXX 760
            K       +  ++L   F+ T   I +   D   +++     +    + GH   ++   
Sbjct: 319 GKCVATLTGHDDEILDSCFDYTGKLIATASADGTARIFSAATRECVTKLEGHEGEISKIS 378

Query: 761 XXXXXXXXXXNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAA 940
                      + D T R+WD    A   +C+++ +G+       +  C+++  G  I  
Sbjct: 379 FNPQGNRLLTGSSDKTARIWD----AQTGQCLQVLEGHT----DEIFSCAFNYKGDIIIT 430

Query: 941 GSADRFVYVW 970
           GS D    +W
Sbjct: 431 GSKDNTCRIW 440



 Score = 99.4 bits (246), Expect = 7e-21
 Identities = 50/206 (24%), Positives = 97/206 (47%), Gaps = 2/206 (0%)
 Frame = +2

Query: 209 IMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYN 388
           +  L+GH  E+    F+ +G+ + +  FD  + +W        Y TL GH   +    +N
Sbjct: 238 VFTLTGHSAEIISLSFNTSGNRIITGSFDHTVTVWEADTGRKVY-TLIGHCAEISSAVFN 296

Query: 389 TDGSMLFSASTDKTVAVWDSETGERVKRLKGH-TSFVNSCYPARRGPQLVCTGSDDGTVK 565
            D S++ + S DKT  +WD+  G+ V  L GH    ++SC+      +L+ T S DGT +
Sbjct: 297 WDCSLILTGSMDKTCKLWDAVNGKCVATLTGHDDEILDSCFDYT--GKLIATASADGTAR 354

Query: 566 LWDIRKKAAIQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHAD 742
           ++    +  +   + +  ++  ++FN   +++++G  D   ++WD +  +    + GH D
Sbjct: 355 IFSAATRECVTKLEGHEGEISKISFNPQGNRLLTGSSDKTARIWDAQTGQCLQVLEGHTD 414

Query: 743 SVTXXXXXXXXXXXXXNAMDNTVRVW 820
            +               + DNT R+W
Sbjct: 415 EIFSCAFNYKGDIIITGSKDNTCRIW 440


>ref|NP_001033649.1| WD repeat domain 51A [Bos taurus]
          Length = 407

 Score =  121 bits (303), Expect = 2e-27
 Identities = 86/289 (29%), Positives = 126/289 (43%), Gaps = 1/289 (0%)
 Frame = +2

Query: 224  GHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSM 403
            GH   V    F  N   LAS   D  +++W++      Y    GH  AV  ++++  G +
Sbjct: 17   GHRDAVTSVDFSLNTKQLASGSMDSCLMVWHMKPQTRAYR-FAGHKDAVTCVNFSPSGHL 75

Query: 404  LFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDI-R 580
            L S S DKTV +W           + HT+ V S +    G   V T SDD TVK+W   R
Sbjct: 76   LASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSFV-TASDDKTVKVWSTHR 134

Query: 581  KKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTXXX 760
            +K      Q+   V    F+     I+S   D  +K+WD    +  ++   H   VT   
Sbjct: 135  QKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVD 194

Query: 761  XXXXXXXXXXNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAA 940
                        MDNTV+VWDVR      R ++ +Q  +H+   N L  S+ P G+ +  
Sbjct: 195  FHPSGTCIAAAGMDNTVKVWDVRT----HRLLQHYQ--LHSAAVNAL--SFHPSGNYLVT 246

Query: 941  GSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEPIILSASSDKRL 1087
             S+D  + + D    R+LY L GH G    VAF        S  SD+++
Sbjct: 247  ASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQV 295



 Score =  108 bits (271), Expect = 9e-24
 Identities = 70/253 (27%), Positives = 122/253 (48%), Gaps = 3/253 (1%)
 Frame = +2

Query: 221 SGHEGEVYCCKFHPNGSTLASAGFDRLILLW--NVYGDCDNYATLKGHSGAVMELHYNTD 394
           +GH+  V C  F P+G  LAS   D+ + +W  NV G+       + H+  V  +H+ +D
Sbjct: 58  AGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGES---TVFRAHTATVRSVHFCSD 114

Query: 395 GSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWD 574
           G    +AS DKTV VW +   + +  L  H ++V  C       +L+ + SDD TVKLWD
Sbjct: 115 GQSFVTASDDKTVKVWSTHRQKFLFSLSQHINWVR-CAKFSPDGRLIVSASDDKTVKLWD 173

Query: 575 IRKKAAIQTF-QNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVT 751
              +  + ++ ++   V  V F+ +   I + G+DN +KVWD+R ++L    + H+ +V 
Sbjct: 174 KTSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVN 233

Query: 752 XXXXXXXXXXXXXNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSK 931
                         + D+T+++ D+     + R +      +H  +      ++S  G  
Sbjct: 234 ALSFHPSGNYLVTASSDSTLKILDLM----EGRLLY----TLHGHQGPATTVAFSRTGEY 285

Query: 932 IAAGSADRFVYVW 970
            A+G +D  V VW
Sbjct: 286 FASGGSDEQVMVW 298



 Score =  100 bits (249), Expect = 3e-21
 Identities = 67/250 (26%), Positives = 110/250 (44%), Gaps = 4/250 (1%)
 Frame = +2

Query: 350  KGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQ 529
            KGH  AV  + ++ +   L S S D  + VW  +   R  R  GH   V +C        
Sbjct: 16   KGHRDAVTSVDFSLNTKQLASGSMDSCLMVWHMKPQTRAYRFAGHKDAV-TCVNFSPSGH 74

Query: 530  LVCTGSDDGTVKLWDIRKKAAIQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQ 706
            L+ +GS D TV++W    K     F+ +T  V +V F       ++   D  +KVW   +
Sbjct: 75   LLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTVKVWSTHR 134

Query: 707  NKLTYTMRGHADSVTXXXXXXXXXXXXXNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNF 886
             K  +++  H + V               + D TV++WD           K  +  VH++
Sbjct: 135  QKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWD-----------KTSRECVHSY 183

Query: 887  EKN---LLRCSWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEPI 1057
             ++   +    + P G+ IAA   D  V VWD  + R+L     H+ ++N ++FHP    
Sbjct: 184  CEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNY 243

Query: 1058 ILSASSDKRL 1087
            +++ASSD  L
Sbjct: 244  LVTASSDSTL 253



 Score = 75.9 bits (185), Expect = 8e-14
 Identities = 50/166 (30%), Positives = 78/166 (46%), Gaps = 7/166 (4%)
 Frame = +2

Query: 218 LSGHEGEVYCCKFHPNGSTLASAGFDRLILLWN------VYGDCDNYATLKGHSGAVMEL 379
           LS H   V C KF P+G  + SA  D+ + LW+      V+  C+       H G V  +
Sbjct: 141 LSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCE-------HGGFVTYV 193

Query: 380 HYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGT 559
            ++  G+ + +A  D TV VWD  T   ++  + H++ VN+      G  LV T S D T
Sbjct: 194 DFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLV-TASSDST 252

Query: 560 VKLWDIRKKAAIQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKVW 694
           +K+ D+ +   + T   +      V F+ T +   SGG D  + VW
Sbjct: 253 LKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVW 298



 Score = 74.3 bits (181), Expect = 2e-13
 Identities = 51/196 (26%), Positives = 83/196 (42%), Gaps = 34/196 (17%)
 Frame = +2

Query: 620  VLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTXXXXXXXXXXXXXNAM 799
            V +V F+  + Q+ SG +D+ + VW ++     Y   GH D+VT              + 
Sbjct: 22   VTSVDFSLNTKQLASGSMDSCLMVWHMKPQTRAYRFAGHKDAVTCVNFSPSGHLLASGSR 81

Query: 800  DNTVRVW-------------------------DVRPF--APKERCVKIFQGNVHNF---- 886
            D TVR+W                         D + F  A  ++ VK++  +   F    
Sbjct: 82   DKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTVKVWSTHRQKFLFSL 141

Query: 887  --EKNLLRCS-WSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEPI 1057
                N +RC+ +SPDG  I + S D+ V +WD TSR  ++    H G +  V FHP    
Sbjct: 142  SQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTC 201

Query: 1058 ILSASSDKRLYTGEIQ 1105
            I +A  D  +   +++
Sbjct: 202  IAAAGMDNTVKVWDVR 217


>ref|XP_869200.1| PREDICTED: similar to Autophagy protein 16-like (APG16-like) isoform
            3 [Bos taurus]
          Length = 607

 Score =  120 bits (301), Expect = 3e-27
 Identities = 82/282 (29%), Positives = 133/282 (47%), Gaps = 5/282 (1%)
 Frame = +2

Query: 215  LLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGD-CDNYATLKGHSGAVMELHYNT 391
            +   H+GEV   +F P    LA+ G DR + LW V+GD C+   +L G +  +  + +++
Sbjct: 317  VFDAHDGEVNAVQFSPGSRLLATGGMDRRVKLWEVFGDKCEFKGSLSGSNAGITSIEFDS 376

Query: 392  DGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLW 571
             GS L +AS D    +W  +       L GH+  V S        ++V +GS D T+KLW
Sbjct: 377  AGSYLLAASNDFASRIWTVDDYRLRHTLTGHSGKVLSAKFLLDNARIV-SGSHDRTLKLW 435

Query: 572  DIRKKAAIQTFQNTYQVLAVTFND---TSDQIISGGIDNDIKVWDLRQNKLTYTMRGHAD 742
            D+R K  I+T          + ND   T   ++SG  D  I+ WD+R   +   M     
Sbjct: 436  DLRSKVCIKTV-----FAGSSCNDIVCTEQCVMSGHFDKKIRFWDIRSESIVREME-LLG 489

Query: 743  SVTXXXXXXXXXXXXXNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPD 922
             +T              + D+ +++ D+R  A ++     F         +  R  +SPD
Sbjct: 490  KITALDLNPERTELLSCSRDDLLKIIDLRINAVRQ----TFSAPGFKCGSDWTRAVFSPD 545

Query: 923  GSKIAAGSADRFVYVWDTTSRRILYKL-PGHAGSINEVAFHP 1045
            GS +AAG+A+  +Y+W+  S ++   L   H+ SIN VA+ P
Sbjct: 546  GSYVAAGAAEGSLYIWNVLSGKVEKVLSKHHSSSINAVAWSP 587


>ref|XP_877191.1| PREDICTED: similar to Autophagy protein 16-like (APG16-like) isoform
            6 [Bos taurus]
          Length = 588

 Score =  120 bits (301), Expect = 3e-27
 Identities = 82/282 (29%), Positives = 133/282 (47%), Gaps = 5/282 (1%)
 Frame = +2

Query: 215  LLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGD-CDNYATLKGHSGAVMELHYNT 391
            +   H+GEV   +F P    LA+ G DR + LW V+GD C+   +L G +  +  + +++
Sbjct: 298  VFDAHDGEVNAVQFSPGSRLLATGGMDRRVKLWEVFGDKCEFKGSLSGSNAGITSIEFDS 357

Query: 392  DGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLW 571
             GS L +AS D    +W  +       L GH+  V S        ++V +GS D T+KLW
Sbjct: 358  AGSYLLAASNDFASRIWTVDDYRLRHTLTGHSGKVLSAKFLLDNARIV-SGSHDRTLKLW 416

Query: 572  DIRKKAAIQTFQNTYQVLAVTFND---TSDQIISGGIDNDIKVWDLRQNKLTYTMRGHAD 742
            D+R K  I+T          + ND   T   ++SG  D  I+ WD+R   +   M     
Sbjct: 417  DLRSKVCIKTV-----FAGSSCNDIVCTEQCVMSGHFDKKIRFWDIRSESIVREME-LLG 470

Query: 743  SVTXXXXXXXXXXXXXNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPD 922
             +T              + D+ +++ D+R  A ++     F         +  R  +SPD
Sbjct: 471  KITALDLNPERTELLSCSRDDLLKIIDLRINAVRQ----TFSAPGFKCGSDWTRAVFSPD 526

Query: 923  GSKIAAGSADRFVYVWDTTSRRILYKL-PGHAGSINEVAFHP 1045
            GS +AAG+A+  +Y+W+  S ++   L   H+ SIN VA+ P
Sbjct: 527  GSYVAAGAAEGSLYIWNVLSGKVEKVLSKHHSSSINAVAWSP 568


>ref|XP_877095.1| PREDICTED: similar to Autophagy protein 16-like (APG16-like) isoform
            5 [Bos taurus]
          Length = 623

 Score =  120 bits (301), Expect = 3e-27
 Identities = 82/282 (29%), Positives = 133/282 (47%), Gaps = 5/282 (1%)
 Frame = +2

Query: 215  LLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGD-CDNYATLKGHSGAVMELHYNT 391
            +   H+GEV   +F P    LA+ G DR + LW V+GD C+   +L G +  +  + +++
Sbjct: 333  VFDAHDGEVNAVQFSPGSRLLATGGMDRRVKLWEVFGDKCEFKGSLSGSNAGITSIEFDS 392

Query: 392  DGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLW 571
             GS L +AS D    +W  +       L GH+  V S        ++V +GS D T+KLW
Sbjct: 393  AGSYLLAASNDFASRIWTVDDYRLRHTLTGHSGKVLSAKFLLDNARIV-SGSHDRTLKLW 451

Query: 572  DIRKKAAIQTFQNTYQVLAVTFND---TSDQIISGGIDNDIKVWDLRQNKLTYTMRGHAD 742
            D+R K  I+T          + ND   T   ++SG  D  I+ WD+R   +   M     
Sbjct: 452  DLRSKVCIKTV-----FAGSSCNDIVCTEQCVMSGHFDKKIRFWDIRSESIVREME-LLG 505

Query: 743  SVTXXXXXXXXXXXXXNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPD 922
             +T              + D+ +++ D+R  A ++     F         +  R  +SPD
Sbjct: 506  KITALDLNPERTELLSCSRDDLLKIIDLRINAVRQ----TFSAPGFKCGSDWTRAVFSPD 561

Query: 923  GSKIAAGSADRFVYVWDTTSRRILYKL-PGHAGSINEVAFHP 1045
            GS +AAG+A+  +Y+W+  S ++   L   H+ SIN VA+ P
Sbjct: 562  GSYVAAGAAEGSLYIWNVLSGKVEKVLSKHHSSSINAVAWSP 603


>ref|XP_603483.2| PREDICTED: similar to WD repeat domain 51B [Bos taurus]
          Length = 495

 Score =  111 bits (277), Expect = 2e-24
 Identities = 69/289 (23%), Positives = 134/289 (46%), Gaps = 1/289 (0%)
 Frame = +2

Query: 224  GHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSM 403
            GH+  +    F PNG  LA+  +D  ++LW++      +  + GH   +  + ++  G++
Sbjct: 33   GHKAAITSVDFSPNGKQLATGSWDTFLMLWSLRPQARAFRYV-GHKDVITSVQFSPLGNL 91

Query: 404  LFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDI-R 580
            L SAS D+T+ +W  +   +    K HT+ V S   +  G Q + + S+D ++K+W++ R
Sbjct: 92   LASASRDRTIRLWIPDKRGKSSEFKAHTAPVRSVDFSADG-QFLASASEDKSIKVWNMYR 150

Query: 581  KKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTXXX 760
            ++     +++T+ V    F+     I+S   D  IK+WD    +                
Sbjct: 151  QRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDFVGFANFVA 210

Query: 761  XXXXXXXXXXNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAA 940
                         D+TV++WD+R      + ++ +Q  VH+   N +  S+ P G+ +  
Sbjct: 211  FNPNGTCIASAGSDHTVKIWDIRV----NKLLQHYQ--VHSGGVNCV--SFHPSGNYLIT 262

Query: 941  GSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEPIILSASSDKRL 1087
             S+D  + + D    R++Y L GH G +  V+F     +  S  +D ++
Sbjct: 263  ASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFTSGGADAQV 311



 Score =  108 bits (269), Expect = 2e-23
 Identities = 76/268 (28%), Positives = 118/268 (44%), Gaps = 1/268 (0%)
 Frame = +2

Query: 200  QAPIMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMEL 379
            QA      GH+  +   +F P G+ LASA  DR I LW +       +  K H+  V  +
Sbjct: 67   QARAFRYVGHKDVITSVQFSPLGNLLASASRDRTIRLW-IPDKRGKSSEFKAHTAPVRSV 125

Query: 380  HYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGT 559
             ++ DG  L SAS DK++ VW+      +  L  HT +V  C       +L+ + S+D T
Sbjct: 126  DFSADGQFLASASEDKSIKVWNMYRQRFLYSLYRHTHWVR-CAKFSPDGRLIVSCSEDKT 184

Query: 560  VKLWDIRKKAAIQTFQNTYQVLA-VTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGH 736
            +K+WD   K  +  F +       V FN     I S G D+ +K+WD+R NKL    + H
Sbjct: 185  IKIWDTTNKQCVNNFSDFVGFANFVAFNPNGTCIASAGSDHTVKIWDIRVNKLLQHYQVH 244

Query: 737  ADSVTXXXXXXXXXXXXXNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWS 916
            +  V               + D T+++ D+     + R +   QG+       +   S+S
Sbjct: 245  SGGVNCVSFHPSGNYLITASSDGTLKILDLL----EGRLIYTLQGHT----GPVFTVSFS 296

Query: 917  PDGSKIAAGSADRFVYVWDTTSRRILYK 1000
              G    +G AD  V +W T    + YK
Sbjct: 297  KGGELFTSGGADAQVLLWRTNFDELNYK 324



 Score =  103 bits (256), Expect = 5e-22
 Identities = 67/249 (26%), Positives = 115/249 (46%), Gaps = 3/249 (1%)
 Frame = +2

Query: 350  KGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQ 529
            KGH  A+  + ++ +G  L + S D  + +W      R  R  GH   + S   +  G  
Sbjct: 32   KGHKAAITSVDFSPNGKQLATGSWDTFLMLWSLRPQARAFRYVGHKDVITSVQFSPLG-N 90

Query: 530  LVCTGSDDGTVKLWDIRKKAAIQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQ 706
            L+ + S D T++LW   K+     F+ +T  V +V F+     + S   D  IKVW++ +
Sbjct: 91   LLASASRDRTIRLWIPDKRGKSSEFKAHTAPVRSVDFSADGQFLASASEDKSIKVWNMYR 150

Query: 707  NKLTYTMRGHADSVTXXXXXXXXXXXXXNAMDNTVRVWDVRPFAPKERCVKIFQGNVH-- 880
             +  Y++  H   V               + D T+++WD       ++CV  F   V   
Sbjct: 151  QRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTT----NKQCVNNFSDFVGFA 206

Query: 881  NFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEPII 1060
            NF       +++P+G+ IA+  +D  V +WD    ++L     H+G +N V+FHP    +
Sbjct: 207  NF------VAFNPNGTCIASAGSDHTVKIWDIRVNKLLQHYQVHSGGVNCVSFHPSGNYL 260

Query: 1061 LSASSDKRL 1087
            ++ASSD  L
Sbjct: 261  ITASSDGTL 269


>ref|XP_588289.2| PREDICTED: similar to APG16L beta isoform [Bos taurus]
          Length = 616

 Score =  110 bits (275), Expect = 3e-24
 Identities = 84/277 (30%), Positives = 128/277 (46%), Gaps = 2/277 (0%)
 Frame = +2

Query: 215  LLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVY-GDCDNYATLKGHSGAVMELHYNT 391
            +L  H  EV   +F PN S LA+ G DRLILLWNV  G      TL+G  G++  + ++ 
Sbjct: 328  VLDAHLSEVSAVRFGPNSSLLATGGADRLILLWNVVGGHLKANQTLEGAGGSITSVDFDP 387

Query: 392  DGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLW 571
             GS L +A+ +K   +W     +  + L GHT  V +        Q V TGS D TVK W
Sbjct: 388  SGSQLLAATYNKAAQLWKVGEAQSKETLSGHTDKVTAAKFKLTRHQAV-TGSRDRTVKEW 446

Query: 572  DIRKKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVT 751
            D+ +    +T         V   D    IISG  D  I+ WD R  + T  +      VT
Sbjct: 447  DLCRAYCSRTINVLSYCNDVVCGD--HIIISGHNDQKIRFWDSRGPRCTQVIPVQG-RVT 503

Query: 752  XXXXXXXXXXXXXNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSK 931
                          + D+T++V D+R         ++F+ +      +  +  +SPD S 
Sbjct: 504  SLSLSHDQLHLLSCSRDDTLKVIDLR----VSNIRQVFRADGFKCGSDWTKAVFSPDRSY 559

Query: 932  IAAGSADRFVYVWDTTSRRILYKLPG-HAGSINEVAF 1039
              AGS D  +Y+W+  + ++   L G H+ ++N VA+
Sbjct: 560  ALAGSWDGALYIWNVDTGKLESSLRGPHSAAVNAVAW 596


>ref|NP_777088.1| platelet-activating factor acetylhydrolase, isoform Ib, alpha subunit
            (45kD) [Bos taurus]
          Length = 410

 Score =  109 bits (273), Expect = 5e-24
 Identities = 81/274 (29%), Positives = 124/274 (45%), Gaps = 22/274 (8%)
 Frame = +2

Query: 332  DNYATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYP 511
            + YA L GH   V  + ++   S++ SAS D T+ VWD ETG+  + LKGHT  V     
Sbjct: 100  EKYA-LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVEDISF 158

Query: 512  ARRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIK 688
               G +L+ + S D T+KLWD +    I+T   + + V +V      D I+S   D  IK
Sbjct: 159  DHSG-KLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIK 217

Query: 689  VWDLRQNKLTYTMRGHADSVTXXXXXXXXXXXXXNAMDNTVRVWDVRPFAPKERCVKIFQ 868
            +W+++      T  GH + V               + D TVRVW V   A KE   ++ +
Sbjct: 218  MWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVV---ATKECKAELRE 274

Query: 869  GNVHNFEKNLLRC-SWSPDGSK--------------------IAAGSADRFVYVWDTTSR 985
                   ++++ C SW+P+ S                     + +GS D+ + +WD ++ 
Sbjct: 275  ------HEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTG 328

Query: 986  RILYKLPGHAGSINEVAFHPDEPIILSASSDKRL 1087
              L  L GH   +  V FH     ILS + DK L
Sbjct: 329  MCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTL 362



 Score =  102 bits (255), Expect = 6e-22
 Identities = 79/315 (25%), Positives = 136/315 (43%), Gaps = 21/315 (6%)
 Frame = +2

Query: 218  LSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDG 397
            LSGH   V    FHP  S + SA  D  I +W+ Y   D   TLKGH+ +V ++ ++  G
Sbjct: 104  LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWD-YETGDFERTLKGHTDSVEDISFDHSG 162

Query: 398  SMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDI 577
             +L S S D T+ +WD +  E ++ + GH   V+S      G  +V + S D T+K+W++
Sbjct: 163  KLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIV-SASRDKTIKMWEV 221

Query: 578  RKKAAIQTFQNTYQ-VLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTX 754
            +    ++TF    + V  V  N     I S   D  ++VW +   +    +R H   V  
Sbjct: 222  QTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVEC 281

Query: 755  XXXXXXXXXXXXN--------------------AMDNTVRVWDVRPFAPKERCVKIFQGN 874
                        +                    + D T+++WDV        C+    G+
Sbjct: 282  ISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVST----GMCLMTLVGH 337

Query: 875  VHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEP 1054
              N+ + +L   +   G  I + + D+ + VWD  ++R +  L  H   +  + FH   P
Sbjct: 338  -DNWVRGVL---FHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAP 393

Query: 1055 IILSASSDKRLYTGE 1099
             +++ S D+ +   E
Sbjct: 394  YVVTGSVDQTVKVWE 408



 Score = 88.6 bits (218), Expect = 1e-17
 Identities = 66/229 (28%), Positives = 97/229 (42%), Gaps = 22/229 (9%)
 Frame = +2

Query: 209 IMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVY-GDCDNYATLKGHSGAVMELHY 385
           I  + GH+  V      PNG  + SA  D+ I +W V  G C    T  GH   V  +  
Sbjct: 185 IRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYC--VKTFTGHREWVRMVRP 242

Query: 386 NTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFV-------NSCYPA---------- 514
           N DG+++ S S D+TV VW   T E    L+ H   V        S Y +          
Sbjct: 243 NQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETK 302

Query: 515 ---RRGPQLVCTGSDDGTVKLWDIRKKAAIQTF-QNTYQVLAVTFNDTSDQIISGGIDND 682
              + GP L+ +GS D T+K+WD+     + T   +   V  V F+     I+S   D  
Sbjct: 303 KSGKPGPFLL-SGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKT 361

Query: 683 IKVWDLRQNKLTYTMRGHADSVTXXXXXXXXXXXXXNAMDNTVRVWDVR 829
           ++VWD +  +   T+  H   VT              ++D TV+VW+ R
Sbjct: 362 LRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410



 Score = 57.0 bits (136), Expect = 4e-08
 Identities = 48/188 (25%), Positives = 78/188 (41%), Gaps = 3/188 (1%)
 Frame = +2

Query: 578  RKKAAIQTFQNTYQVLAVTFNDTSDQIISGGI---DNDIKVWDLRQNKLTYTMRGHADSV 748
            +K  ++   Q     L    N+  ++  SGG      D K W  R  +  Y + GH   V
Sbjct: 53   KKWTSVIRLQKKVMELESKLNEAKEEFTSGGPLGQKRDPKEWIPRPPE-KYALSGHRSPV 111

Query: 749  TXXXXXXXXXXXXXNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGS 928
            T              + D T++VWD       ER +K    +V +        S+   G 
Sbjct: 112  TRVIFHPVFSVMVSASEDATIKVWDYET-GDFERTLKGHTDSVEDI-------SFDHSGK 163

Query: 929  KIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEPIILSASSDKRLYTGEIQ* 1108
             +A+ SAD  + +WD      +  + GH  +++ VA  P+   I+SAS DK +   E+Q 
Sbjct: 164  LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQT 223

Query: 1109 RYGMEDST 1132
             Y ++  T
Sbjct: 224  GYCVKTFT 231


  Database: RefSeqBP
    Posted date:  Aug 1, 2006  7:14 PM
  Number of letters in database: 16,112,626
  Number of sequences in database:  33,508
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 51,289,914
Number of Sequences: 33508
Number of extensions: 1231585
Number of successful extensions: 6742
Number of sequences better than 1.0e-05: 10
Number of HSP's better than  0.0 without gapping: 2960
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4699
length of database: 16,112,626
effective HSP length: 106
effective length of database: 12,560,778
effective search space used: 5212722870
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

Search to RefSeqCP

BLASTX 2.2.10 [Oct-19-2004]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= OVRM1_0112_F03
         (1567 letters)

Database: RefSeqCP 
           33,732 sequences; 19,266,565 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|XP_854730.1| PREDICTED: similar to WD-repeat protein 57 [Can...   644   0.0  
Alignment   gi|XP_850117.1| PREDICTED: similar to WD repeat domain 5 [Canis...   147   3e-35
Alignment   gi|XP_534593.2| PREDICTED: similar to CG7568-PA [Canis familiaris]   135   8e-32
Alignment   gi|XP_541857.2| PREDICTED: similar to WD repeat domain 51A isof...   122   1e-27
Alignment   gi|XP_862068.1| PREDICTED: similar to Autophagy protein 16-like...   120   4e-27
Alignment   gi|XP_534608.2| PREDICTED: similar to Autophagy protein 16-like...   120   4e-27
Alignment   gi|XP_850664.1| PREDICTED: similar to Autophagy protein 16-like...   120   4e-27
Alignment   gi|XP_862542.1| PREDICTED: similar to Katanin p80 WD40-containi...   118   2e-26
Alignment   gi|XP_850865.1| PREDICTED: similar to Katanin p80 WD40-containi...   118   2e-26
Alignment   gi|XP_532646.2| PREDICTED: similar to WD repeat domain 51B [Can...   114   3e-25

>ref|XP_854730.1| PREDICTED: similar to WD-repeat protein 57 [Canis familiaris]
          Length = 358

 Score =  644 bits (1660), Expect = 0.0
 Identities = 316/358 (88%), Positives = 316/358 (88%)
 Frame = +2

Query: 32   MIEQQKRKGPELPLVPVKRQRHEXXXXXXXXXXXXXXXXXXXXXXXXXXXXRCSSLQAPI 211
            MIEQQKRKGPELPLVPVKRQRHE                            RCSSLQAPI
Sbjct: 1    MIEQQKRKGPELPLVPVKRQRHELLLGAAGSGPGAGQQQTAPGALLQAGPPRCSSLQAPI 60

Query: 212  MLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNT 391
            MLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNT
Sbjct: 61   MLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNT 120

Query: 392  DGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLW 571
            DGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLW
Sbjct: 121  DGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLW 180

Query: 572  DIRKKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVT 751
            DIRKKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVT
Sbjct: 181  DIRKKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVT 240

Query: 752  XXXXXXXXXXXXXNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSK 931
                         NAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSK
Sbjct: 241  GLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSK 300

Query: 932  IAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEPIILSASSDKRLYTGEIQ 1105
            IAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEPIILSASSDKRLY GEIQ
Sbjct: 301  IAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEPIILSASSDKRLYMGEIQ 358


>ref|XP_850117.1| PREDICTED: similar to WD repeat domain 5 [Canis familiaris]
          Length = 334

 Score =  147 bits (371), Expect = 3e-35
 Identities = 94/290 (32%), Positives = 149/290 (51%), Gaps = 5/290 (1%)
 Frame = +2

Query: 218  LSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDG 397
            L+GH   V   KF PNG  LAS+  D+LI +W  Y D     T+ GH   + ++ +++D 
Sbjct: 41   LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAY-DGKFEKTISGHKLGISDVAWSSDS 99

Query: 398  SMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQ--LVCTGSDDGTVKLW 571
            ++L SAS DKT+ +WD  +G+ +K LKGH+++V  C      PQ  L+ +GS D +V++W
Sbjct: 100  NLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCC---NFNPQSNLIVSGSFDESVRIW 156

Query: 572  DIRKKAAIQTF-QNTYQVLAVTFNDTSDQIISGGIDNDI-KVWDLRQNKLTYTMRGHADS 745
            D++    ++T   ++  V AV FN     I+S   D    K  +     +   +      
Sbjct: 157  DVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCGKTGNAASRCMKLILDDDNPP 216

Query: 746  VTXXXXXXXXXXXXXNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDG 925
            V+               +DNT+++WD      K +C+K + G  H  EK  +  ++S  G
Sbjct: 217  VSFVKFSPNGKYILAATLDNTLKLWDY----SKGKCLKTYTG--HKNEKYCIFANFSVTG 270

Query: 926  SK-IAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEPIILSAS 1072
             K I +GS D  VY+W+  ++ I+ KL GH   +   A HP E II SA+
Sbjct: 271  GKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAA 320



 Score = 93.2 bits (230), Expect = 6e-19
 Identities = 56/208 (26%), Positives = 97/208 (46%), Gaps = 7/208 (3%)
 Frame = +2

Query: 218 LSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVY-GDCDNYATLKGHSGAVMELHYNTD 394
           L GH   V+CC F+P  + + S  FD  + +W+V  G C    TL  HS  V  +H+N D
Sbjct: 125 LKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKC--LKTLPAHSDPVSAVHFNRD 182

Query: 395 GSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWD 574
           GS++ S+S D       +     +K +    +   S        + +   + D T+KLWD
Sbjct: 183 GSLIVSSSYDGLCGKTGNAASRCMKLILDDDNPPVSFVKFSPNGKYILAATLDNTLKLWD 242

Query: 575 IRKKAAIQTF---QNTYQVLAVTFNDTSDQ-IISGGIDNDIKVWDLRQNKLTYTMRGHAD 742
             K   ++T+   +N    +   F+ T  + I+SG  DN + +W+L+  ++   ++GH D
Sbjct: 243 YSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTD 302

Query: 743 SVTXXXXXXXXXXXXXNAMDN--TVRVW 820
            V               A++N  T+++W
Sbjct: 303 VVISTACHPTENIIASAALENDKTIKLW 330



 Score = 73.9 bits (180), Expect = 4e-13
 Identities = 41/157 (26%), Positives = 74/157 (47%)
 Frame = +2

Query: 608  NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTXXXXXXXXXXXX 787
            +T  V +V F+   + + S   D  IK+W     K   T+ GH   ++            
Sbjct: 44   HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLV 103

Query: 788  XNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYV 967
              + D T+++WDV       +C+K  +G+       +  C+++P  + I +GS D  V +
Sbjct: 104  SASDDKTLKIWDVS----SGKCLKTLKGH----SNYVFCCNFNPQSNLIVSGSFDESVRI 155

Query: 968  WDTTSRRILYKLPGHAGSINEVAFHPDEPIILSASSD 1078
            WD  + + L  LP H+  ++ V F+ D  +I+S+S D
Sbjct: 156  WDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYD 192



 Score = 57.0 bits (136), Expect = 5e-08
 Identities = 38/127 (29%), Positives = 60/127 (47%), Gaps = 7/127 (5%)
 Frame = +2

Query: 212 MLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYN- 388
           ++L      V   KF PNG  + +A  D  + LW+ Y       T  GH      +  N 
Sbjct: 208 LILDDDNPPVSFVKFSPNGKYILAATLDNTLKLWD-YSKGKCLKTYTGHKNEKYCIFANF 266

Query: 389 --TDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFV--NSCYPARRGPQLVCTGS--D 550
             T G  + S S D  V +W+ +T E V++L+GHT  V   +C+P      ++ + +  +
Sbjct: 267 SVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTE---NIIASAALEN 323

Query: 551 DGTVKLW 571
           D T+KLW
Sbjct: 324 DKTIKLW 330



 Score = 50.1 bits (118), Expect = 6e-06
 Identities = 26/131 (19%), Positives = 58/131 (44%)
 Frame = +2

Query: 713  LTYTMRGHADSVTXXXXXXXXXXXXXNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEK 892
            L +T+ GH  +V+             ++ D  +++W              F+  +   + 
Sbjct: 37   LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGK--------FEKTISGHKL 88

Query: 893  NLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEPIILSAS 1072
             +   +WS D + + + S D+ + +WD +S + L  L GH+  +    F+P   +I+S S
Sbjct: 89   GISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGS 148

Query: 1073 SDKRLYTGEIQ 1105
             D+ +   +++
Sbjct: 149  FDESVRIWDVK 159


>ref|XP_534593.2| PREDICTED: similar to CG7568-PA [Canis familiaris]
          Length = 415

 Score =  135 bits (341), Expect = 8e-32
 Identities = 80/275 (29%), Positives = 136/275 (49%), Gaps = 2/275 (0%)
 Frame = +2

Query: 263  NGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTD-GSMLFSASTDKTVAV 439
            +GS   +  +DR   LW+     +   TL+GH   V  + +N   G  + + S DKT  +
Sbjct: 103  SGSCFITGSYDRTCKLWDTASG-EELHTLEGHRNVVYAIAFNNPYGDKIATGSFDKTCKL 161

Query: 440  WDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQ-NTY 616
            W  ETG+     +GHT+ +  C        LV TGS D T KLWDI+    + T + ++ 
Sbjct: 162  WSVETGKCYHTFRGHTAEI-VCLSFNPQSTLVATGSMDTTAKLWDIQSGEEVFTLRGHSA 220

Query: 617  QVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTXXXXXXXXXXXXXNA 796
            ++++++FN + D+I++G  D+ + VW+    +  YT+ GH   ++              +
Sbjct: 221  EIISLSFNTSGDRIVTGSFDHTVAVWEADTGRKVYTLIGHCAEISSALFNWDCSLILTGS 280

Query: 797  MDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDT 976
            MD T  +WD    A   +CV    G+    +  +L   +   G  IA  SAD    V+  
Sbjct: 281  MDKTCMLWD----ASNGKCVATLTGH----DDEILDSCFDYTGKLIATASADGTARVFSA 332

Query: 977  TSRRILYKLPGHAGSINEVAFHPDEPIILSASSDK 1081
             +R+ L KL GH G I++++F+P    +L+ S+D+
Sbjct: 333  ATRKCLTKLEGHEGEISKISFNPQGNRLLTGSADE 367



 Score =  134 bits (338), Expect = 2e-31
 Identities = 84/290 (28%), Positives = 139/290 (47%), Gaps = 3/290 (1%)
 Frame = +2

Query: 218  LSGHEGEVYCCKFH-PNGSTLASAGFDRLILLWNVY-GDCDNYATLKGHSGAVMELHYNT 391
            L GH   VY   F+ P G  +A+  FD+   LW+V  G C  Y T +GH+  ++ L +N 
Sbjct: 130  LEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSVETGKC--YHTFRGHTAEIVCLSFNP 187

Query: 392  DGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLW 571
              +++ + S D T  +WD ++GE V  L+GH++ + S      G ++V TGS D TV +W
Sbjct: 188  QSTLVATGSMDTTAKLWDIQSGEEVFTLRGHSAEIISLSFNTSGDRIV-TGSFDHTVAVW 246

Query: 572  DIRKKAAIQT-FQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSV 748
            +      + T   +  ++ +  FN     I++G +D    +WD    K   T+ GH D +
Sbjct: 247  EADTGRKVYTLIGHCAEISSALFNWDCSLILTGSMDKTCMLWDASNGKCVATLTGHDDEI 306

Query: 749  TXXXXXXXXXXXXXNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGS 928
                           + D T RV+     A   +C+   +G+    E  + + S++P G+
Sbjct: 307  LDSCFDYTGKLIATASADGTARVFS----AATRKCLTKLEGH----EGEISKISFNPQGN 358

Query: 929  KIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEPIILSASSD 1078
            ++  GSAD    +WD  + + L  L GH   I   AF+    II++ S D
Sbjct: 359  RLLTGSADETARIWDAQTGQCLQVLEGHTDEIFSCAFNYKGDIIITGSKD 408



 Score =  115 bits (288), Expect = 1e-25
 Identities = 67/250 (26%), Positives = 113/250 (45%), Gaps = 1/250 (0%)
 Frame = +2

Query: 224 GHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSM 403
           GH  E+ C  F+P  + +A+   D    LW++    +   TL+GHS  ++ L +NT G  
Sbjct: 175 GHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQSG-EEVFTLRGHSAEIISLSFNTSGDR 233

Query: 404 LFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRK 583
           + + S D TVAVW+++TG +V  L GH + ++S         L+ TGS D T  LWD   
Sbjct: 234 IVTGSFDHTVAVWEADTGRKVYTLIGHCAEISSAL-FNWDCSLILTGSMDKTCMLWDASN 292

Query: 584 KAAIQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTXXX 760
              + T   +  ++L   F+ T   I +   D   +V+     K    + GH   ++   
Sbjct: 293 GKCVATLTGHDDEILDSCFDYTGKLIATASADGTARVFSAATRKCLTKLEGHEGEISKIS 352

Query: 761 XXXXXXXXXXNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAA 940
                      + D T R+WD    A   +C+++ +G+       +  C+++  G  I  
Sbjct: 353 FNPQGNRLLTGSADETARIWD----AQTGQCLQVLEGHT----DEIFSCAFNYKGDIIIT 404

Query: 941 GSADRFVYVW 970
           GS D    +W
Sbjct: 405 GSKDNTCRIW 414



 Score = 99.0 bits (245), Expect = 1e-20
 Identities = 50/206 (24%), Positives = 95/206 (46%), Gaps = 2/206 (0%)
 Frame = +2

Query: 209 IMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYN 388
           +  L GH  E+    F+ +G  + +  FD  + +W        Y TL GH   +    +N
Sbjct: 212 VFTLRGHSAEIISLSFNTSGDRIVTGSFDHTVAVWEADTGRKVY-TLIGHCAEISSALFN 270

Query: 389 TDGSMLFSASTDKTVAVWDSETGERVKRLKGH-TSFVNSCYPARRGPQLVCTGSDDGTVK 565
            D S++ + S DKT  +WD+  G+ V  L GH    ++SC+      +L+ T S DGT +
Sbjct: 271 WDCSLILTGSMDKTCMLWDASNGKCVATLTGHDDEILDSCFDYT--GKLIATASADGTAR 328

Query: 566 LWDIRKKAAIQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHAD 742
           ++    +  +   + +  ++  ++FN   +++++G  D   ++WD +  +    + GH D
Sbjct: 329 VFSAATRKCLTKLEGHEGEISKISFNPQGNRLLTGSADETARIWDAQTGQCLQVLEGHTD 388

Query: 743 SVTXXXXXXXXXXXXXNAMDNTVRVW 820
            +               + DNT R+W
Sbjct: 389 EIFSCAFNYKGDIIITGSKDNTCRIW 414



 Score = 92.4 bits (228), Expect = 1e-18
 Identities = 63/238 (26%), Positives = 104/238 (43%), Gaps = 12/238 (5%)
 Frame = +2

Query: 404  LFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGP----------QLVCTGSDD 553
            L +AS  + V +      +++++   HT ++     A   P              TGS D
Sbjct: 54   LITASRSEQVKLLIQRLQDKLRQHSNHTFYLFKVLRAHILPLTNVALNKSGSCFITGSYD 113

Query: 554  GTVKLWDIRKKAAIQTFQNTYQVL-AVTFNDT-SDQIISGGIDNDIKVWDLRQNKLTYTM 727
             T KLWD      + T +    V+ A+ FN+   D+I +G  D   K+W +   K  +T 
Sbjct: 114  RTCKLWDTASGEELHTLEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSVETGKCYHTF 173

Query: 728  RGHADSVTXXXXXXXXXXXXXNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRC 907
            RGH   +               +MD T ++WD++         ++F    H+ E  ++  
Sbjct: 174  RGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQSGE------EVFTLRGHSAE--IISL 225

Query: 908  SWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEPIILSASSDK 1081
            S++  G +I  GS D  V VW+  + R +Y L GH   I+   F+ D  +IL+ S DK
Sbjct: 226  SFNTSGDRIVTGSFDHTVAVWEADTGRKVYTLIGHCAEISSALFNWDCSLILTGSMDK 283


>ref|XP_541857.2| PREDICTED: similar to WD repeat domain 51A isoform 1 [Canis
            familiaris]
          Length = 406

 Score =  122 bits (306), Expect = 1e-27
 Identities = 86/289 (29%), Positives = 128/289 (44%), Gaps = 1/289 (0%)
 Frame = +2

Query: 224  GHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSM 403
            GH   +    F  N   LAS   D  +++W++      Y    GH  AV  ++++  G +
Sbjct: 17   GHRDAITSVDFSLNTKQLASGSMDSCLMVWHMKPQSRAYR-FAGHKDAVTCVNFSPSGHL 75

Query: 404  LFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDI-R 580
            L S S DKTV +W           + HT+ V S +    G  LV T SDD TVK+W   R
Sbjct: 76   LASGSRDKTVRIWIPNVKGESTVFRAHTATVRSVHFCSDGQSLV-TASDDKTVKVWSTHR 134

Query: 581  KKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTXXX 760
            +K      Q+   V    F+     I+S   D  +K+WD    +  ++   H   VT   
Sbjct: 135  QKFLFSLSQHINWVRCARFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVD 194

Query: 761  XXXXXXXXXXNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAA 940
                       +MDNTV+VWDVR      R ++ +Q  +H+   N L  S+ P G+ +  
Sbjct: 195  FHPSGTCIAAASMDNTVKVWDVRT----HRLLQHYQ--LHSAAVNAL--SFHPSGNYLLT 246

Query: 941  GSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEPIILSASSDKRL 1087
             S+D  + + D    R+LY L GH G    VAF        S  SD+++
Sbjct: 247  ASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQV 295



 Score =  108 bits (269), Expect = 2e-23
 Identities = 71/263 (26%), Positives = 126/263 (47%), Gaps = 3/263 (1%)
 Frame = +2

Query: 221  SGHEGEVYCCKFHPNGSTLASAGFDRLILLW--NVYGDCDNYATLKGHSGAVMELHYNTD 394
            +GH+  V C  F P+G  LAS   D+ + +W  NV G+       + H+  V  +H+ +D
Sbjct: 58   AGHKDAVTCVNFSPSGHLLASGSRDKTVRIWIPNVKGES---TVFRAHTATVRSVHFCSD 114

Query: 395  GSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWD 574
            G  L +AS DKTV VW +   + +  L  H ++V  C       +L+ + SDD TVKLWD
Sbjct: 115  GQSLVTASDDKTVKVWSTHRQKFLFSLSQHINWVR-CARFSPDGRLIVSASDDKTVKLWD 173

Query: 575  IRKKAAIQTF-QNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVT 751
               +  + ++ ++   V  V F+ +   I +  +DN +KVWD+R ++L    + H+ +V 
Sbjct: 174  KTSRECVHSYCEHGGFVTYVDFHPSGTCIAAASMDNTVKVWDVRTHRLLQHYQLHSAAVN 233

Query: 752  XXXXXXXXXXXXXNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSK 931
                          + D+T+++ D+     + R +      +H  +      ++S  G  
Sbjct: 234  ALSFHPSGNYLLTASSDSTLKILDLM----EGRLLY----TLHGHQGPATTVAFSRTGEY 285

Query: 932  IAAGSADRFVYVWDTTSRRILYK 1000
             A+G +D  V VW +    + Y+
Sbjct: 286  FASGGSDEQVMVWKSNFDVVDYR 308



 Score =  103 bits (258), Expect = 4e-22
 Identities = 68/250 (27%), Positives = 112/250 (44%), Gaps = 4/250 (1%)
 Frame = +2

Query: 350  KGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQ 529
            KGH  A+  + ++ +   L S S D  + VW  +   R  R  GH   V +C        
Sbjct: 16   KGHRDAITSVDFSLNTKQLASGSMDSCLMVWHMKPQSRAYRFAGHKDAV-TCVNFSPSGH 74

Query: 530  LVCTGSDDGTVKLWDIRKKAAIQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQ 706
            L+ +GS D TV++W    K     F+ +T  V +V F      +++   D  +KVW   +
Sbjct: 75   LLASGSRDKTVRIWIPNVKGESTVFRAHTATVRSVHFCSDGQSLVTASDDKTVKVWSTHR 134

Query: 707  NKLTYTMRGHADSVTXXXXXXXXXXXXXNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNF 886
             K  +++  H + V               + D TV++WD           K  +  VH++
Sbjct: 135  QKFLFSLSQHINWVRCARFSPDGRLIVSASDDKTVKLWD-----------KTSRECVHSY 183

Query: 887  EKN---LLRCSWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEPI 1057
             ++   +    + P G+ IAA S D  V VWD  + R+L     H+ ++N ++FHP    
Sbjct: 184  CEHGGFVTYVDFHPSGTCIAAASMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNY 243

Query: 1058 ILSASSDKRL 1087
            +L+ASSD  L
Sbjct: 244  LLTASSDSTL 253



 Score = 75.1 bits (183), Expect = 2e-13
 Identities = 49/166 (29%), Positives = 79/166 (47%), Gaps = 7/166 (4%)
 Frame = +2

Query: 218 LSGHEGEVYCCKFHPNGSTLASAGFDRLILLWN------VYGDCDNYATLKGHSGAVMEL 379
           LS H   V C +F P+G  + SA  D+ + LW+      V+  C+       H G V  +
Sbjct: 141 LSQHINWVRCARFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCE-------HGGFVTYV 193

Query: 380 HYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGT 559
            ++  G+ + +AS D TV VWD  T   ++  + H++ VN+      G  L+ T S D T
Sbjct: 194 DFHPSGTCIAAASMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLL-TASSDST 252

Query: 560 VKLWDIRKKAAIQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKVW 694
           +K+ D+ +   + T   +      V F+ T +   SGG D  + VW
Sbjct: 253 LKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVW 298



 Score = 74.7 bits (182), Expect = 2e-13
 Identities = 51/196 (26%), Positives = 83/196 (42%), Gaps = 34/196 (17%)
 Frame = +2

Query: 620  VLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTXXXXXXXXXXXXXNAM 799
            + +V F+  + Q+ SG +D+ + VW ++     Y   GH D+VT              + 
Sbjct: 22   ITSVDFSLNTKQLASGSMDSCLMVWHMKPQSRAYRFAGHKDAVTCVNFSPSGHLLASGSR 81

Query: 800  DNTVRVW----------------DVRPF-----------APKERCVKIFQGNVHNF---- 886
            D TVR+W                 VR             A  ++ VK++  +   F    
Sbjct: 82   DKTVRIWIPNVKGESTVFRAHTATVRSVHFCSDGQSLVTASDDKTVKVWSTHRQKFLFSL 141

Query: 887  --EKNLLRCS-WSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEPI 1057
                N +RC+ +SPDG  I + S D+ V +WD TSR  ++    H G +  V FHP    
Sbjct: 142  SQHINWVRCARFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTC 201

Query: 1058 ILSASSDKRLYTGEIQ 1105
            I +AS D  +   +++
Sbjct: 202  IAAASMDNTVKVWDVR 217


>ref|XP_862068.1| PREDICTED: similar to Autophagy protein 16-like (APG16-like) isoform
            3 [Canis familiaris]
          Length = 623

 Score =  120 bits (301), Expect = 4e-27
 Identities = 83/295 (28%), Positives = 134/295 (45%), Gaps = 5/295 (1%)
 Frame = +2

Query: 215  LLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGD-CDNYATLKGHSGAVMELHYNT 391
            +   H+GEV   +F P    LA+ G DR + LW V+GD C+   +L G +  +  + +++
Sbjct: 333  IFDAHDGEVNAVQFSPGSRLLATGGMDRRVKLWEVFGDKCEFKGSLSGSNAGITSIEFDS 392

Query: 392  DGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLW 571
             GS L +AS D    +W  +       L GH+  V S        ++V +GS D T+KLW
Sbjct: 393  AGSYLLAASNDFASRIWTVDDYRLRHTLTGHSGKVLSAKFLLDNARIV-SGSHDRTLKLW 451

Query: 572  DIRKKAAIQTFQNTYQVLAVTFND---TSDQIISGGIDNDIKVWDLRQNKLTYTMRGHAD 742
            D+R K  I+T          + ND   T   ++SG  D  I+ WD+R   +   M     
Sbjct: 452  DLRSKVCIKTV-----FAGSSCNDIVCTEQCVMSGHFDKKIRFWDIRSESIVREME-LLG 505

Query: 743  SVTXXXXXXXXXXXXXNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPD 922
             +T              + D+ +++ D+R  A ++     F         +  R  +SPD
Sbjct: 506  KITALDLNPERTELLSCSRDDLLKIIDLRINAVRQ----TFSAPGFKCGSDWTRVVFSPD 561

Query: 923  GSKIAAGSADRFVYVWDTTSRRILYKL-PGHAGSINEVAFHPDEPIILSASSDKR 1084
            G  +AAGSA+  +Y+W   S ++   L   H  SIN VA+ P    ++S     +
Sbjct: 562  GGYVAAGSAEGSLYIWSVLSGKVEKVLSKQHGSSINAVAWSPSGSHVVSVDKGSK 616


>ref|XP_534608.2| PREDICTED: similar to Autophagy protein 16-like (APG16-like) isoform
            1 [Canis familiaris]
          Length = 588

 Score =  120 bits (301), Expect = 4e-27
 Identities = 83/295 (28%), Positives = 134/295 (45%), Gaps = 5/295 (1%)
 Frame = +2

Query: 215  LLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGD-CDNYATLKGHSGAVMELHYNT 391
            +   H+GEV   +F P    LA+ G DR + LW V+GD C+   +L G +  +  + +++
Sbjct: 298  IFDAHDGEVNAVQFSPGSRLLATGGMDRRVKLWEVFGDKCEFKGSLSGSNAGITSIEFDS 357

Query: 392  DGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLW 571
             GS L +AS D    +W  +       L GH+  V S        ++V +GS D T+KLW
Sbjct: 358  AGSYLLAASNDFASRIWTVDDYRLRHTLTGHSGKVLSAKFLLDNARIV-SGSHDRTLKLW 416

Query: 572  DIRKKAAIQTFQNTYQVLAVTFND---TSDQIISGGIDNDIKVWDLRQNKLTYTMRGHAD 742
            D+R K  I+T          + ND   T   ++SG  D  I+ WD+R   +   M     
Sbjct: 417  DLRSKVCIKTV-----FAGSSCNDIVCTEQCVMSGHFDKKIRFWDIRSESIVREME-LLG 470

Query: 743  SVTXXXXXXXXXXXXXNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPD 922
             +T              + D+ +++ D+R  A ++     F         +  R  +SPD
Sbjct: 471  KITALDLNPERTELLSCSRDDLLKIIDLRINAVRQ----TFSAPGFKCGSDWTRVVFSPD 526

Query: 923  GSKIAAGSADRFVYVWDTTSRRILYKL-PGHAGSINEVAFHPDEPIILSASSDKR 1084
            G  +AAGSA+  +Y+W   S ++   L   H  SIN VA+ P    ++S     +
Sbjct: 527  GGYVAAGSAEGSLYIWSVLSGKVEKVLSKQHGSSINAVAWSPSGSHVVSVDKGSK 581


>ref|XP_850664.1| PREDICTED: similar to Autophagy protein 16-like (APG16-like) isoform
            2 [Canis familiaris]
          Length = 607

 Score =  120 bits (301), Expect = 4e-27
 Identities = 83/295 (28%), Positives = 134/295 (45%), Gaps = 5/295 (1%)
 Frame = +2

Query: 215  LLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGD-CDNYATLKGHSGAVMELHYNT 391
            +   H+GEV   +F P    LA+ G DR + LW V+GD C+   +L G +  +  + +++
Sbjct: 317  IFDAHDGEVNAVQFSPGSRLLATGGMDRRVKLWEVFGDKCEFKGSLSGSNAGITSIEFDS 376

Query: 392  DGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLW 571
             GS L +AS D    +W  +       L GH+  V S        ++V +GS D T+KLW
Sbjct: 377  AGSYLLAASNDFASRIWTVDDYRLRHTLTGHSGKVLSAKFLLDNARIV-SGSHDRTLKLW 435

Query: 572  DIRKKAAIQTFQNTYQVLAVTFND---TSDQIISGGIDNDIKVWDLRQNKLTYTMRGHAD 742
            D+R K  I+T          + ND   T   ++SG  D  I+ WD+R   +   M     
Sbjct: 436  DLRSKVCIKTV-----FAGSSCNDIVCTEQCVMSGHFDKKIRFWDIRSESIVREME-LLG 489

Query: 743  SVTXXXXXXXXXXXXXNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPD 922
             +T              + D+ +++ D+R  A ++     F         +  R  +SPD
Sbjct: 490  KITALDLNPERTELLSCSRDDLLKIIDLRINAVRQ----TFSAPGFKCGSDWTRVVFSPD 545

Query: 923  GSKIAAGSADRFVYVWDTTSRRILYKL-PGHAGSINEVAFHPDEPIILSASSDKR 1084
            G  +AAGSA+  +Y+W   S ++   L   H  SIN VA+ P    ++S     +
Sbjct: 546  GGYVAAGSAEGSLYIWSVLSGKVEKVLSKQHGSSINAVAWSPSGSHVVSVDKGSK 600


>ref|XP_862542.1| PREDICTED: similar to Katanin p80 WD40-containing subunit B1 (Katanin
            p80 subunit B1) (p80 katanin) isoform 2 [Canis
            familiaris]
          Length = 655

 Score =  118 bits (295), Expect = 2e-26
 Identities = 64/216 (29%), Positives = 112/216 (51%), Gaps = 2/216 (0%)
 Frame = +2

Query: 446  SETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQ-NTYQV 622
            ++T  +++ +  H S V+S    +   +L+ TG DD  V LW I K   I +   +T  V
Sbjct: 7    TKTAWKLQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPV 66

Query: 623  LAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTXXXXXXXXXXXXXNAMD 802
             +V  N   + I++G     I+VWDL   K+  T+ GH  ++               + D
Sbjct: 67   ESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQD 126

Query: 803  NTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRC-SWSPDGSKIAAGSADRFVYVWDTT 979
              +++WD+R    ++ CV  ++G+        +RC  +SPDG  +A+ + D  V +WD T
Sbjct: 127  TNIKLWDIR----RKGCVFRYRGH-----SQAVRCLRFSPDGKWLASAADDHTVKLWDLT 177

Query: 980  SRRILYKLPGHAGSINEVAFHPDEPIILSASSDKRL 1087
            + +++ + PGH G +N V FHP+E ++ S SSD+ +
Sbjct: 178  AGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTI 213



 Score = 93.6 bits (231), Expect = 5e-19
 Identities = 64/239 (26%), Positives = 108/239 (45%), Gaps = 2/239 (0%)
 Frame = +2

Query: 263 NGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVW 442
           +G  LA+ G D  + LW++    +   +L GH+  V  +  NT   ++ + S   ++ VW
Sbjct: 32  SGRLLATGGDDCRVNLWSI-NKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVW 90

Query: 443 DSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQNTYQ- 619
           D E  + ++ L GH + + S      G + V +GS D  +KLWDIR+K  +  ++   Q 
Sbjct: 91  DLEAAKILRTLMGHKANICSLDFHPYG-EFVASGSQDTNIKLWDIRRKGCVFRYRGHSQA 149

Query: 620 VLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTXXXXXXXXXXXXXNAM 799
           V  + F+     + S   D+ +K+WDL   K+     GH   V               + 
Sbjct: 150 VRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSS 209

Query: 800 DNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRF-VYVWD 973
           D T+R WD+  F     C++   G V +         ++PDG  + +G  D   VY W+
Sbjct: 210 DRTIRFWDLEKFQVVS-CIEGEPGPVRS-------VLFNPDGCCLYSGCQDSLRVYGWE 260



 Score = 92.8 bits (229), Expect = 8e-19
 Identities = 61/237 (25%), Positives = 110/237 (46%), Gaps = 2/237 (0%)
 Frame = +2

Query: 395  GSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWD 574
            G +L +   D  V +W       +  L GHTS V S        +L+  GS  G++++WD
Sbjct: 33   GRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVR-LNTPEELIVAGSQSGSIRVWD 91

Query: 575  IRKKAAIQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVT 751
            +     ++T   +   + ++ F+   + + SG  D +IK+WD+R+    +  RGH+ +V 
Sbjct: 92   LEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVR 151

Query: 752  XXXXXXXXXXXXXNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSK 931
                          A D+TV++WD+       + +  F G  H    N++   + P+   
Sbjct: 152  CLRFSPDGKWLASAADDHTVKLWDLTA----GKMMSEFPG--HTGPVNVVE--FHPNEYL 203

Query: 932  IAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEPIILSASSDK-RLYTGE 1099
            +A+GS+DR +  WD    +++  + G  G +  V F+PD   + S   D  R+Y  E
Sbjct: 204  LASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFNPDGCCLYSGCQDSLRVYGWE 260



 Score = 78.2 bits (191), Expect = 2e-14
 Identities = 52/157 (33%), Positives = 74/157 (47%), Gaps = 3/157 (1%)
 Frame = +2

Query: 218 LSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVY--GDCDNYATLKGHSGAVMELHYNT 391
           L GH+  +    FHP G  +AS   D  I LW++   G    Y   +GHS AV  L ++ 
Sbjct: 101 LMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRY---RGHSQAVRCLRFSP 157

Query: 392 DGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLW 571
           DG  L SA+ D TV +WD   G+ +    GHT  VN          L+ +GS D T++ W
Sbjct: 158 DGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVN-VVEFHPNEYLLASGSSDRTIRFW 216

Query: 572 DIRKKAAIQTFQ-NTYQVLAVTFNDTSDQIISGGIDN 679
           D+ K   +   +     V +V FN     + SG  D+
Sbjct: 217 DLEKFQVVSCIEGEPGPVRSVLFNPDGCCLYSGCQDS 253


>ref|XP_850865.1| PREDICTED: similar to Katanin p80 WD40-containing subunit B1 (Katanin
            p80 subunit B1) (p80 katanin) isoform 1 [Canis
            familiaris]
          Length = 655

 Score =  118 bits (295), Expect = 2e-26
 Identities = 64/216 (29%), Positives = 112/216 (51%), Gaps = 2/216 (0%)
 Frame = +2

Query: 446  SETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQ-NTYQV 622
            ++T  +++ +  H S V+S    +   +L+ TG DD  V LW I K   I +   +T  V
Sbjct: 7    TKTAWKLQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPV 66

Query: 623  LAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTXXXXXXXXXXXXXNAMD 802
             +V  N   + I++G     I+VWDL   K+  T+ GH  ++               + D
Sbjct: 67   ESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQD 126

Query: 803  NTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRC-SWSPDGSKIAAGSADRFVYVWDTT 979
              +++WD+R    ++ CV  ++G+        +RC  +SPDG  +A+ + D  V +WD T
Sbjct: 127  TNIKLWDIR----RKGCVFRYRGH-----SQAVRCLRFSPDGKWLASAADDHTVKLWDLT 177

Query: 980  SRRILYKLPGHAGSINEVAFHPDEPIILSASSDKRL 1087
            + +++ + PGH G +N V FHP+E ++ S SSD+ +
Sbjct: 178  AGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTI 213



 Score = 93.6 bits (231), Expect = 5e-19
 Identities = 64/239 (26%), Positives = 108/239 (45%), Gaps = 2/239 (0%)
 Frame = +2

Query: 263 NGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVW 442
           +G  LA+ G D  + LW++    +   +L GH+  V  +  NT   ++ + S   ++ VW
Sbjct: 32  SGRLLATGGDDCRVNLWSI-NKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVW 90

Query: 443 DSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQNTYQ- 619
           D E  + ++ L GH + + S      G + V +GS D  +KLWDIR+K  +  ++   Q 
Sbjct: 91  DLEAAKILRTLMGHKANICSLDFHPYG-EFVASGSQDTNIKLWDIRRKGCVFRYRGHSQA 149

Query: 620 VLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTXXXXXXXXXXXXXNAM 799
           V  + F+     + S   D+ +K+WDL   K+     GH   V               + 
Sbjct: 150 VRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSS 209

Query: 800 DNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRF-VYVWD 973
           D T+R WD+  F     C++   G V +         ++PDG  + +G  D   VY W+
Sbjct: 210 DRTIRFWDLEKFQVVS-CIEGEPGPVRS-------VLFNPDGCCLYSGCQDSLRVYGWE 260



 Score = 92.8 bits (229), Expect = 8e-19
 Identities = 61/237 (25%), Positives = 110/237 (46%), Gaps = 2/237 (0%)
 Frame = +2

Query: 395  GSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWD 574
            G +L +   D  V +W       +  L GHTS V S        +L+  GS  G++++WD
Sbjct: 33   GRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVR-LNTPEELIVAGSQSGSIRVWD 91

Query: 575  IRKKAAIQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVT 751
            +     ++T   +   + ++ F+   + + SG  D +IK+WD+R+    +  RGH+ +V 
Sbjct: 92   LEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVR 151

Query: 752  XXXXXXXXXXXXXNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSK 931
                          A D+TV++WD+       + +  F G  H    N++   + P+   
Sbjct: 152  CLRFSPDGKWLASAADDHTVKLWDLTA----GKMMSEFPG--HTGPVNVVE--FHPNEYL 203

Query: 932  IAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEPIILSASSDK-RLYTGE 1099
            +A+GS+DR +  WD    +++  + G  G +  V F+PD   + S   D  R+Y  E
Sbjct: 204  LASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFNPDGCCLYSGCQDSLRVYGWE 260



 Score = 78.2 bits (191), Expect = 2e-14
 Identities = 52/157 (33%), Positives = 74/157 (47%), Gaps = 3/157 (1%)
 Frame = +2

Query: 218 LSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVY--GDCDNYATLKGHSGAVMELHYNT 391
           L GH+  +    FHP G  +AS   D  I LW++   G    Y   +GHS AV  L ++ 
Sbjct: 101 LMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRY---RGHSQAVRCLRFSP 157

Query: 392 DGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLW 571
           DG  L SA+ D TV +WD   G+ +    GHT  VN          L+ +GS D T++ W
Sbjct: 158 DGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVN-VVEFHPNEYLLASGSSDRTIRFW 216

Query: 572 DIRKKAAIQTFQ-NTYQVLAVTFNDTSDQIISGGIDN 679
           D+ K   +   +     V +V FN     + SG  D+
Sbjct: 217 DLEKFQVVSCIEGEPGPVRSVLFNPDGCCLYSGCQDS 253


>ref|XP_532646.2| PREDICTED: similar to WD repeat domain 51B [Canis familiaris]
          Length = 833

 Score =  114 bits (285), Expect = 3e-25
 Identities = 74/289 (25%), Positives = 134/289 (46%), Gaps = 1/289 (0%)
 Frame = +2

Query: 224  GHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSM 403
            GH+  +    F P+G  LA+A +D  ++LWN       +  + GH   V  + ++  G++
Sbjct: 371  GHKAAITSVDFSPSGKQLATASWDTFLMLWNCKPQARAFRYV-GHKDVVTSVQFSPLGNL 429

Query: 404  LFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDI-R 580
            L SAS D+TV +W  +   +    K HT+ V S   +  G Q + T S+D ++K+W++ R
Sbjct: 430  LASASRDRTVRLWIPDKRGKSSEFKAHTAPVRSVDFSADG-QFLATASEDKSIKVWNMYR 488

Query: 581  KKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTXXX 760
            ++     +++T+ V    F+     I+S   D  IK+WD    +                
Sbjct: 489  QRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVD 548

Query: 761  XXXXXXXXXXNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAA 940
                         D+TV++WD+R      + ++ +Q  VH+   N +  S+ P G+ I  
Sbjct: 549  FNPNGTCIASAGSDHTVKIWDIRV----NKLLQHYQ--VHSGGVNCV--SFHPSGNYIIT 600

Query: 941  GSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEPIILSASSDKRL 1087
             S+D  + + D    R++Y L GH G +  V+F     +  S  +D ++
Sbjct: 601  ASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFSSGGADTQV 649



 Score =  107 bits (266), Expect = 4e-23
 Identities = 70/249 (28%), Positives = 117/249 (46%), Gaps = 3/249 (1%)
 Frame = +2

Query: 350  KGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQ 529
            KGH  A+  + ++  G  L +AS D  + +W+ +   R  R  GH   V S   +  G  
Sbjct: 370  KGHKAAITSVDFSPSGKQLATASWDTFLMLWNCKPQARAFRYVGHKDVVTSVQFSPLG-N 428

Query: 530  LVCTGSDDGTVKLWDIRKKAAIQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQ 706
            L+ + S D TV+LW   K+     F+ +T  V +V F+     + +   D  IKVW++ +
Sbjct: 429  LLASASRDRTVRLWIPDKRGKSSEFKAHTAPVRSVDFSADGQFLATASEDKSIKVWNMYR 488

Query: 707  NKLTYTMRGHADSVTXXXXXXXXXXXXXNAMDNTVRVWDVRPFAPKERCVKIFQGNVH-- 880
             +  Y++  H   V               + D T+++WD       ++CV  F  +V   
Sbjct: 489  QRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTT----NKQCVNNFSDSVGFA 544

Query: 881  NFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEPII 1060
            NF        ++P+G+ IA+  +D  V +WD    ++L     H+G +N V+FHP    I
Sbjct: 545  NF------VDFNPNGTCIASAGSDHTVKIWDIRVNKLLQHYQVHSGGVNCVSFHPSGNYI 598

Query: 1061 LSASSDKRL 1087
            ++ASSD  L
Sbjct: 599  ITASSDGTL 607



 Score =  105 bits (262), Expect = 1e-22
 Identities = 73/260 (28%), Positives = 117/260 (45%), Gaps = 1/260 (0%)
 Frame = +2

Query: 200  QAPIMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMEL 379
            QA      GH+  V   +F P G+ LASA  DR + LW +       +  K H+  V  +
Sbjct: 405  QARAFRYVGHKDVVTSVQFSPLGNLLASASRDRTVRLW-IPDKRGKSSEFKAHTAPVRSV 463

Query: 380  HYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGT 559
             ++ DG  L +AS DK++ VW+      +  L  HT +V  C       +L+ + S+D T
Sbjct: 464  DFSADGQFLATASEDKSIKVWNMYRQRFLYSLYRHTHWVR-CAKFSPDGRLIVSCSEDKT 522

Query: 560  VKLWDIRKKAAIQTFQNTYQVLA-VTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGH 736
            +K+WD   K  +  F ++      V FN     I S G D+ +K+WD+R NKL    + H
Sbjct: 523  IKIWDTTNKQCVNNFSDSVGFANFVDFNPNGTCIASAGSDHTVKIWDIRVNKLLQHYQVH 582

Query: 737  ADSVTXXXXXXXXXXXXXNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWS 916
            +  V               + D T+++ D+     + R +   QG+       +   S+S
Sbjct: 583  SGGVNCVSFHPSGNYIITASSDGTLKILDLL----EGRLIYTLQGHT----GPVFTVSFS 634

Query: 917  PDGSKIAAGSADRFVYVWDT 976
              G   ++G AD  V +W T
Sbjct: 635  KGGELFSSGGADTQVLLWRT 654


  Database: RefSeqCP
    Posted date:  Aug 1, 2006  9:25 PM
  Number of letters in database: 19,266,565
  Number of sequences in database:  33,732
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 60,201,894
Number of Sequences: 33732
Number of extensions: 1439661
Number of successful extensions: 7573
Number of sequences better than 1.0e-05: 10
Number of HSP's better than  0.0 without gapping: 3368
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5252
length of database: 19,266,565
effective HSP length: 108
effective length of database: 15,623,509
effective search space used: 6452509217
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

Search to RefSeqHP

BLASTX 2.2.10 [Oct-19-2004]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= OVRM1_0112_F03
         (1567 letters)

Database: RefSeqHP 
           39,411 sequences; 17,774,539 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_004805.1| WD repeat domain 57 (U5 snRNP specific) [Homo s...   634   0.0  
Alignment   gi|NP_061942.2| WD repeat domain 5B [Homo sapiens]                   160   3e-39
Alignment   gi|NP_438172.1| WD repeat domain 5 [Homo sapiens]                    157   3e-38
Alignment   gi|NP_060058.1| WD repeat domain 5 [Homo sapiens]                    157   3e-38
Alignment   gi|NP_849143.1| hypothetical protein LOC164781 [Homo sapiens]        135   1e-31
Alignment   gi|NP_056241.2| WD repeat domain 51A [Homo sapiens]                  124   3e-28
Alignment   gi|XP_947007.1| PREDICTED: similar to CG7704-PA isoform 1 [Homo...   122   8e-28
Alignment   gi|NP_060444.2| APG16 autophagy 16-like isoform 2 [Homo sapiens]     121   2e-27
Alignment   gi|NP_110430.4| APG16 autophagy 16-like isoform 1 [Homo sapiens]     121   2e-27
Alignment   gi|XP_934992.1| PREDICTED: similar to CG7704-PA isoform 1 [Homo...   120   4e-27

>ref|NP_004805.1| WD repeat domain 57 (U5 snRNP specific) [Homo sapiens]
          Length = 357

 Score =  634 bits (1634), Expect = 0.0
 Identities = 312/358 (87%), Positives = 315/358 (87%)
 Frame = +2

Query: 32   MIEQQKRKGPELPLVPVKRQRHEXXXXXXXXXXXXXXXXXXXXXXXXXXXXRCSSLQAPI 211
            MI+QQKRKGPELPLVPVKRQRHE                            RCSSLQAPI
Sbjct: 1    MIDQQKRKGPELPLVPVKRQRHELLLGAGSGPGAGQQQATPGALLQAGPP-RCSSLQAPI 59

Query: 212  MLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNT 391
            MLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNT
Sbjct: 60   MLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNT 119

Query: 392  DGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLW 571
            DGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPAR+ PQLVCTGSDDGTVKLW
Sbjct: 120  DGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARKSPQLVCTGSDDGTVKLW 179

Query: 572  DIRKKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVT 751
            DIRKKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVT
Sbjct: 180  DIRKKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVT 239

Query: 752  XXXXXXXXXXXXXNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSK 931
                         NAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSK
Sbjct: 240  GLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSK 299

Query: 932  IAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEPIILSASSDKRLYTGEIQ 1105
            IAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEPII+SASSDKRLY GEIQ
Sbjct: 300  IAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEPIIISASSDKRLYMGEIQ 357


>ref|NP_061942.2| WD repeat domain 5B [Homo sapiens]
          Length = 330

 Score =  160 bits (405), Expect = 3e-39
 Identities = 98/288 (34%), Positives = 153/288 (53%), Gaps = 3/288 (1%)
 Frame = +2

Query: 218  LSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDG 397
            L GH   V   KF PNG  LAS+  DRLI++W  Y D     TL GH+  + ++ +++D 
Sbjct: 37   LVGHTEAVSSVKFSPNGEWLASSSADRLIIIWGAY-DGKYEKTLYGHNLEISDVAWSSDS 95

Query: 398  SMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDI 577
            S L SAS DKT+ +WD  +G+ +K LKGH+++V  C        L+ +GS D TVK+W++
Sbjct: 96   SRLVSASDDKTLKLWDVRSGKCLKTLKGHSNYV-FCCNFNPPSNLIISGSFDETVKIWEV 154

Query: 578  RKKAAIQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHAD-SVT 751
            +    ++T   ++  V AV FN +   I+SG  D   ++WD    +   T+    +  V+
Sbjct: 155  KTGKCLKTLSAHSDPVSAVHFNCSGSLIVSGSYDGLCRIWDAASGQCLKTLVDDDNPPVS 214

Query: 752  XXXXXXXXXXXXXNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSK 931
                           +DNT+++WD      + RC+K + G  H  EK  +  ++S  G K
Sbjct: 215  FVKFSPNGKYILTATLDNTLKLWDY----SRGRCLKTYTG--HKNEKYCIFANFSVTGGK 268

Query: 932  -IAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEPIILSAS 1072
             I +GS D  VY+W+  ++ I+ KL GH   +   A HP E +I SA+
Sbjct: 269  WIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISAACHPTENLIASAA 316



 Score =  104 bits (259), Expect = 2e-22
 Identities = 59/208 (28%), Positives = 101/208 (48%), Gaps = 7/208 (3%)
 Frame = +2

Query: 218 LSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVY-GDCDNYATLKGHSGAVMELHYNTD 394
           L GH   V+CC F+P  + + S  FD  + +W V  G C    TL  HS  V  +H+N  
Sbjct: 121 LKGHSNYVFCCNFNPPSNLIISGSFDETVKIWEVKTGKC--LKTLSAHSDPVSAVHFNCS 178

Query: 395 GSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWD 574
           GS++ S S D    +WD+ +G+ +K L    +   S        + + T + D T+KLWD
Sbjct: 179 GSLIVSGSYDGLCRIWDAASGQCLKTLVDDDNPPVSFVKFSPNGKYILTATLDNTLKLWD 238

Query: 575 IRKKAAIQTF---QNTYQVLAVTFNDTSDQ-IISGGIDNDIKVWDLRQNKLTYTMRGHAD 742
             +   ++T+   +N    +   F+ T  + I+SG  DN + +W+L+  ++   ++GH D
Sbjct: 239 YSRGRCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTD 298

Query: 743 SVTXXXXXXXXXXXXXNAMDN--TVRVW 820
            V               A++N  T+++W
Sbjct: 299 VVISAACHPTENLIASAALENDKTIKLW 326



 Score = 50.4 bits (119), Expect = 4e-06
 Identities = 36/149 (24%), Positives = 68/149 (45%)
 Frame = +2

Query: 713  LTYTMRGHADSVTXXXXXXXXXXXXXNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEK 892
            L  T+ GH ++V+             ++ D  + +W     A   +  K   G  HN E 
Sbjct: 33   LKCTLVGHTEAVSSVKFSPNGEWLASSSADRLIIIWG----AYDGKYEKTLYG--HNLE- 85

Query: 893  NLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEPIILSAS 1072
             +   +WS D S++ + S D+ + +WD  S + L  L GH+  +    F+P   +I+S S
Sbjct: 86   -ISDVAWSSDSSRLVSASDDKTLKLWDVRSGKCLKTLKGHSNYVFCCNFNPPSNLIISGS 144

Query: 1073 SDKRLYTGEIQ*RYGMEDSTRLLDPETSV 1159
             D+ +   E++    ++  +   DP ++V
Sbjct: 145  FDETVKIWEVKTGKCLKTLSAHSDPVSAV 173


>ref|NP_438172.1| WD repeat domain 5 [Homo sapiens]
          Length = 334

 Score =  157 bits (396), Expect = 3e-38
 Identities = 96/290 (33%), Positives = 153/290 (52%), Gaps = 5/290 (1%)
 Frame = +2

Query: 218  LSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDG 397
            L+GH   V   KF PNG  LAS+  D+LI +W  Y D     T+ GH   + ++ +++D 
Sbjct: 41   LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAY-DGKFEKTISGHKLGISDVAWSSDS 99

Query: 398  SMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQ--LVCTGSDDGTVKLW 571
            ++L SAS DKT+ +WD  +G+ +K LKGH+++V  C      PQ  L+ +GS D +V++W
Sbjct: 100  NLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCC---NFNPQSNLIVSGSFDESVRIW 156

Query: 572  DIRKKAAIQTF-QNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHAD-S 745
            D++    ++T   ++  V AV FN     I+S   D   ++WD    +   T+    +  
Sbjct: 157  DVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPP 216

Query: 746  VTXXXXXXXXXXXXXNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDG 925
            V+               +DNT+++WD      K +C+K + G  H  EK  +  ++S  G
Sbjct: 217  VSFVKFSPNGKYILAATLDNTLKLWDY----SKGKCLKTYTG--HKNEKYCIFANFSVTG 270

Query: 926  SK-IAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEPIILSAS 1072
             K I +GS D  VY+W+  ++ I+ KL GH   +   A HP E II SA+
Sbjct: 271  GKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAA 320



 Score =  106 bits (265), Expect = 5e-23
 Identities = 60/208 (28%), Positives = 103/208 (49%), Gaps = 7/208 (3%)
 Frame = +2

Query: 218 LSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVY-GDCDNYATLKGHSGAVMELHYNTD 394
           L GH   V+CC F+P  + + S  FD  + +W+V  G C    TL  HS  V  +H+N D
Sbjct: 125 LKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKC--LKTLPAHSDPVSAVHFNRD 182

Query: 395 GSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWD 574
           GS++ S+S D    +WD+ +G+ +K L    +   S        + +   + D T+KLWD
Sbjct: 183 GSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWD 242

Query: 575 IRKKAAIQTF---QNTYQVLAVTFNDTSDQ-IISGGIDNDIKVWDLRQNKLTYTMRGHAD 742
             K   ++T+   +N    +   F+ T  + I+SG  DN + +W+L+  ++   ++GH D
Sbjct: 243 YSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTD 302

Query: 743 SVTXXXXXXXXXXXXXNAMDN--TVRVW 820
            V               A++N  T+++W
Sbjct: 303 VVISTACHPTENIIASAALENDKTIKLW 330



 Score = 73.9 bits (180), Expect = 3e-13
 Identities = 41/157 (26%), Positives = 74/157 (47%)
 Frame = +2

Query: 608  NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTXXXXXXXXXXXX 787
            +T  V +V F+   + + S   D  IK+W     K   T+ GH   ++            
Sbjct: 44   HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLV 103

Query: 788  XNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYV 967
              + D T+++WDV       +C+K  +G+       +  C+++P  + I +GS D  V +
Sbjct: 104  SASDDKTLKIWDVS----SGKCLKTLKGH----SNYVFCCNFNPQSNLIVSGSFDESVRI 155

Query: 968  WDTTSRRILYKLPGHAGSINEVAFHPDEPIILSASSD 1078
            WD  + + L  LP H+  ++ V F+ D  +I+S+S D
Sbjct: 156  WDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYD 192



 Score = 50.1 bits (118), Expect = 5e-06
 Identities = 26/131 (19%), Positives = 58/131 (44%)
 Frame = +2

Query: 713  LTYTMRGHADSVTXXXXXXXXXXXXXNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEK 892
            L +T+ GH  +V+             ++ D  +++W              F+  +   + 
Sbjct: 37   LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGK--------FEKTISGHKL 88

Query: 893  NLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEPIILSAS 1072
             +   +WS D + + + S D+ + +WD +S + L  L GH+  +    F+P   +I+S S
Sbjct: 89   GISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGS 148

Query: 1073 SDKRLYTGEIQ 1105
             D+ +   +++
Sbjct: 149  FDESVRIWDVK 159


>ref|NP_060058.1| WD repeat domain 5 [Homo sapiens]
          Length = 334

 Score =  157 bits (396), Expect = 3e-38
 Identities = 96/290 (33%), Positives = 153/290 (52%), Gaps = 5/290 (1%)
 Frame = +2

Query: 218  LSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDG 397
            L+GH   V   KF PNG  LAS+  D+LI +W  Y D     T+ GH   + ++ +++D 
Sbjct: 41   LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAY-DGKFEKTISGHKLGISDVAWSSDS 99

Query: 398  SMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQ--LVCTGSDDGTVKLW 571
            ++L SAS DKT+ +WD  +G+ +K LKGH+++V  C      PQ  L+ +GS D +V++W
Sbjct: 100  NLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCC---NFNPQSNLIVSGSFDESVRIW 156

Query: 572  DIRKKAAIQTF-QNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHAD-S 745
            D++    ++T   ++  V AV FN     I+S   D   ++WD    +   T+    +  
Sbjct: 157  DVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPP 216

Query: 746  VTXXXXXXXXXXXXXNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDG 925
            V+               +DNT+++WD      K +C+K + G  H  EK  +  ++S  G
Sbjct: 217  VSFVKFSPNGKYILAATLDNTLKLWDY----SKGKCLKTYTG--HKNEKYCIFANFSVTG 270

Query: 926  SK-IAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEPIILSAS 1072
             K I +GS D  VY+W+  ++ I+ KL GH   +   A HP E II SA+
Sbjct: 271  GKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAA 320



 Score =  106 bits (265), Expect = 5e-23
 Identities = 60/208 (28%), Positives = 103/208 (49%), Gaps = 7/208 (3%)
 Frame = +2

Query: 218 LSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVY-GDCDNYATLKGHSGAVMELHYNTD 394
           L GH   V+CC F+P  + + S  FD  + +W+V  G C    TL  HS  V  +H+N D
Sbjct: 125 LKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKC--LKTLPAHSDPVSAVHFNRD 182

Query: 395 GSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWD 574
           GS++ S+S D    +WD+ +G+ +K L    +   S        + +   + D T+KLWD
Sbjct: 183 GSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWD 242

Query: 575 IRKKAAIQTF---QNTYQVLAVTFNDTSDQ-IISGGIDNDIKVWDLRQNKLTYTMRGHAD 742
             K   ++T+   +N    +   F+ T  + I+SG  DN + +W+L+  ++   ++GH D
Sbjct: 243 YSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTD 302

Query: 743 SVTXXXXXXXXXXXXXNAMDN--TVRVW 820
            V               A++N  T+++W
Sbjct: 303 VVISTACHPTENIIASAALENDKTIKLW 330



 Score = 73.9 bits (180), Expect = 3e-13
 Identities = 41/157 (26%), Positives = 74/157 (47%)
 Frame = +2

Query: 608  NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTXXXXXXXXXXXX 787
            +T  V +V F+   + + S   D  IK+W     K   T+ GH   ++            
Sbjct: 44   HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLV 103

Query: 788  XNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYV 967
              + D T+++WDV       +C+K  +G+       +  C+++P  + I +GS D  V +
Sbjct: 104  SASDDKTLKIWDVS----SGKCLKTLKGH----SNYVFCCNFNPQSNLIVSGSFDESVRI 155

Query: 968  WDTTSRRILYKLPGHAGSINEVAFHPDEPIILSASSD 1078
            WD  + + L  LP H+  ++ V F+ D  +I+S+S D
Sbjct: 156  WDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYD 192



 Score = 50.1 bits (118), Expect = 5e-06
 Identities = 26/131 (19%), Positives = 58/131 (44%)
 Frame = +2

Query: 713  LTYTMRGHADSVTXXXXXXXXXXXXXNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEK 892
            L +T+ GH  +V+             ++ D  +++W              F+  +   + 
Sbjct: 37   LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGK--------FEKTISGHKL 88

Query: 893  NLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEPIILSAS 1072
             +   +WS D + + + S D+ + +WD +S + L  L GH+  +    F+P   +I+S S
Sbjct: 89   GISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGS 148

Query: 1073 SDKRLYTGEIQ 1105
             D+ +   +++
Sbjct: 149  FDESVRIWDVK 159


>ref|NP_849143.1| hypothetical protein LOC164781 [Homo sapiens]
          Length = 415

 Score =  135 bits (340), Expect = 1e-31
 Identities = 80/275 (29%), Positives = 135/275 (49%), Gaps = 2/275 (0%)
 Frame = +2

Query: 263  NGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTD-GSMLFSASTDKTVAV 439
            +GS   +  +DR   LW+     +   TL+GH   V  + +N   G  + + S DKT  +
Sbjct: 103  SGSCFITGSYDRTCKLWDTASG-EELNTLEGHRNVVYAIAFNNPYGDKIATGSFDKTCKL 161

Query: 440  WDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQ-NTY 616
            W  ETG+     +GHT+ +  C        LV TGS D T KLWDI+    + T + ++ 
Sbjct: 162  WSVETGKCYHTFRGHTAEI-VCLSFNPQSTLVATGSMDTTAKLWDIQNGEEVYTLRGHSA 220

Query: 617  QVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTXXXXXXXXXXXXXNA 796
            ++++++FN + D+II+G  D+ + VWD    +    + GH   ++              +
Sbjct: 221  EIISLSFNTSGDRIITGSFDHTVVVWDADTGRKVNILIGHCAEISSASFNWDCSLILTGS 280

Query: 797  MDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDT 976
            MD T ++WD    A   +CV    G+    +  +L   +   G  IA  SAD    ++  
Sbjct: 281  MDKTCKLWD----ATNGKCVATLTGH----DDEILDSCFDYTGKLIATASADGTARIFSA 332

Query: 977  TSRRILYKLPGHAGSINEVAFHPDEPIILSASSDK 1081
             +R+ + KL GH G I++++F+P    +L+ SSDK
Sbjct: 333  ATRKCIAKLEGHEGEISKISFNPQGNHLLTGSSDK 367



 Score =  134 bits (338), Expect = 2e-31
 Identities = 81/290 (27%), Positives = 139/290 (47%), Gaps = 3/290 (1%)
 Frame = +2

Query: 218  LSGHEGEVYCCKFH-PNGSTLASAGFDRLILLWNVY-GDCDNYATLKGHSGAVMELHYNT 391
            L GH   VY   F+ P G  +A+  FD+   LW+V  G C  Y T +GH+  ++ L +N 
Sbjct: 130  LEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSVETGKC--YHTFRGHTAEIVCLSFNP 187

Query: 392  DGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLW 571
              +++ + S D T  +WD + GE V  L+GH++ + S      G +++ TGS D TV +W
Sbjct: 188  QSTLVATGSMDTTAKLWDIQNGEEVYTLRGHSAEIISLSFNTSGDRII-TGSFDHTVVVW 246

Query: 572  DIRKKAAIQ-TFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSV 748
            D      +     +  ++ + +FN     I++G +D   K+WD    K   T+ GH D +
Sbjct: 247  DADTGRKVNILIGHCAEISSASFNWDCSLILTGSMDKTCKLWDATNGKCVATLTGHDDEI 306

Query: 749  TXXXXXXXXXXXXXNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGS 928
                           + D T R++     A   +C+   +G+    E  + + S++P G+
Sbjct: 307  LDSCFDYTGKLIATASADGTARIFS----AATRKCIAKLEGH----EGEISKISFNPQGN 358

Query: 929  KIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEPIILSASSD 1078
             +  GS+D+   +WD  + + L  L GH   I   AF+    I+++ S D
Sbjct: 359  HLLTGSSDKTARIWDAQTGQCLQVLEGHTDEIFSCAFNYKGNIVITGSKD 408



 Score =  119 bits (297), Expect = 9e-27
 Identities = 67/250 (26%), Positives = 115/250 (46%), Gaps = 1/250 (0%)
 Frame = +2

Query: 224 GHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSM 403
           GH  E+ C  F+P  + +A+   D    LW++    + Y TL+GHS  ++ L +NT G  
Sbjct: 175 GHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQNGEEVY-TLRGHSAEIISLSFNTSGDR 233

Query: 404 LFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRK 583
           + + S D TV VWD++TG +V  L GH + ++S         L+ TGS D T KLWD   
Sbjct: 234 IITGSFDHTVVVWDADTGRKVNILIGHCAEISSA-SFNWDCSLILTGSMDKTCKLWDATN 292

Query: 584 KAAIQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTXXX 760
              + T   +  ++L   F+ T   I +   D   +++     K    + GH   ++   
Sbjct: 293 GKCVATLTGHDDEILDSCFDYTGKLIATASADGTARIFSAATRKCIAKLEGHEGEISKIS 352

Query: 761 XXXXXXXXXXNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAA 940
                      + D T R+WD    A   +C+++ +G+       +  C+++  G+ +  
Sbjct: 353 FNPQGNHLLTGSSDKTARIWD----AQTGQCLQVLEGHT----DEIFSCAFNYKGNIVIT 404

Query: 941 GSADRFVYVW 970
           GS D    +W
Sbjct: 405 GSKDNTCRIW 414



 Score = 96.7 bits (239), Expect = 5e-20
 Identities = 51/209 (24%), Positives = 95/209 (45%), Gaps = 5/209 (2%)
 Frame = +2

Query: 209 IMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCD---NYATLKGHSGAVMEL 379
           +  L GH  E+    F+ +G  + +  FD  +++W    D D       L GH   +   
Sbjct: 212 VYTLRGHSAEIISLSFNTSGDRIITGSFDHTVVVW----DADTGRKVNILIGHCAEISSA 267

Query: 380 HYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGH-TSFVNSCYPARRGPQLVCTGSDDG 556
            +N D S++ + S DKT  +WD+  G+ V  L GH    ++SC+      +L+ T S DG
Sbjct: 268 SFNWDCSLILTGSMDKTCKLWDATNGKCVATLTGHDDEILDSCFDYT--GKLIATASADG 325

Query: 557 TVKLWDIRKKAAIQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRG 733
           T +++    +  I   + +  ++  ++FN   + +++G  D   ++WD +  +    + G
Sbjct: 326 TARIFSAATRKCIAKLEGHEGEISKISFNPQGNHLLTGSSDKTARIWDAQTGQCLQVLEG 385

Query: 734 HADSVTXXXXXXXXXXXXXNAMDNTVRVW 820
           H D +               + DNT R+W
Sbjct: 386 HTDEIFSCAFNYKGNIVITGSKDNTCRIW 414


>ref|NP_056241.2| WD repeat domain 51A [Homo sapiens]
          Length = 407

 Score =  124 bits (310), Expect = 3e-28
 Identities = 87/289 (30%), Positives = 128/289 (44%), Gaps = 1/289 (0%)
 Frame = +2

Query: 224  GHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSM 403
            GH   V C  F  N   LAS   D  +++W++      Y    GH  AV  ++++  G +
Sbjct: 17   GHRDAVTCVDFSINTKQLASGSMDSCLMVWHMKPQSRAYR-FTGHKDAVTCVNFSPSGHL 75

Query: 404  LFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDI-R 580
            L S S DKTV +W           + HT+ V S +    G   V T SDD TVK+W   R
Sbjct: 76   LASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSFV-TASDDKTVKVWATHR 134

Query: 581  KKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTXXX 760
            +K      Q+   V    F+     I+S   D  +K+WD    +  ++   H   VT   
Sbjct: 135  QKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKSSRECVHSYCEHGGFVTYVD 194

Query: 761  XXXXXXXXXXNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAA 940
                        MDNTV+VWDVR +    R ++ +Q  +H+   N L  S+ P G+ +  
Sbjct: 195  FHPSGTCIAAAGMDNTVKVWDVRTY----RLLQHYQ--LHSAAVNGL--SFHPSGNYLIT 246

Query: 941  GSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEPIILSASSDKRL 1087
             S+D  + + D    R+LY L GH G    VAF        S  SD+++
Sbjct: 247  ASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQV 295



 Score =  106 bits (265), Expect = 5e-23
 Identities = 70/253 (27%), Positives = 121/253 (47%), Gaps = 3/253 (1%)
 Frame = +2

Query: 221 SGHEGEVYCCKFHPNGSTLASAGFDRLILLW--NVYGDCDNYATLKGHSGAVMELHYNTD 394
           +GH+  V C  F P+G  LAS   D+ + +W  NV G+       + H+  V  +H+ +D
Sbjct: 58  TGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGES---TVFRAHTATVRSVHFCSD 114

Query: 395 GSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWD 574
           G    +AS DKTV VW +   + +  L  H ++V  C       +L+ + SDD TVKLWD
Sbjct: 115 GQSFVTASDDKTVKVWATHRQKFLFSLSQHINWVR-CAKFSPDGRLIVSASDDKTVKLWD 173

Query: 575 IRKKAAIQTF-QNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVT 751
              +  + ++ ++   V  V F+ +   I + G+DN +KVWD+R  +L    + H+ +V 
Sbjct: 174 KSSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTYRLLQHYQLHSAAVN 233

Query: 752 XXXXXXXXXXXXXNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSK 931
                         + D+T+++ D+     + R +      +H  +      ++S  G  
Sbjct: 234 GLSFHPSGNYLITASSDSTLKILDLM----EGRLLY----TLHGHQGPATTVAFSRTGEY 285

Query: 932 IAAGSADRFVYVW 970
            A+G +D  V VW
Sbjct: 286 FASGGSDEQVMVW 298



 Score = 97.4 bits (241), Expect = 3e-20
 Identities = 67/250 (26%), Positives = 110/250 (44%), Gaps = 4/250 (1%)
 Frame = +2

Query: 350  KGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQ 529
            KGH  AV  + ++ +   L S S D  + VW  +   R  R  GH   V +C        
Sbjct: 16   KGHRDAVTCVDFSINTKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAV-TCVNFSPSGH 74

Query: 530  LVCTGSDDGTVKLWDIRKKAAIQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQ 706
            L+ +GS D TV++W    K     F+ +T  V +V F       ++   D  +KVW   +
Sbjct: 75   LLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTVKVWATHR 134

Query: 707  NKLTYTMRGHADSVTXXXXXXXXXXXXXNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNF 886
             K  +++  H + V               + D TV++WD           K  +  VH++
Sbjct: 135  QKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWD-----------KSSRECVHSY 183

Query: 887  EKN---LLRCSWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEPI 1057
             ++   +    + P G+ IAA   D  V VWD  + R+L     H+ ++N ++FHP    
Sbjct: 184  CEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTYRLLQHYQLHSAAVNGLSFHPSGNY 243

Query: 1058 ILSASSDKRL 1087
            +++ASSD  L
Sbjct: 244  LITASSDSTL 253



 Score = 74.7 bits (182), Expect = 2e-13
 Identities = 49/166 (29%), Positives = 77/166 (46%), Gaps = 7/166 (4%)
 Frame = +2

Query: 218 LSGHEGEVYCCKFHPNGSTLASAGFDRLILLWN------VYGDCDNYATLKGHSGAVMEL 379
           LS H   V C KF P+G  + SA  D+ + LW+      V+  C+       H G V  +
Sbjct: 141 LSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKSSRECVHSYCE-------HGGFVTYV 193

Query: 380 HYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGT 559
            ++  G+ + +A  D TV VWD  T   ++  + H++ VN       G  L+ T S D T
Sbjct: 194 DFHPSGTCIAAAGMDNTVKVWDVRTYRLLQHYQLHSAAVNGLSFHPSGNYLI-TASSDST 252

Query: 560 VKLWDIRKKAAIQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKVW 694
           +K+ D+ +   + T   +      V F+ T +   SGG D  + VW
Sbjct: 253 LKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVW 298



 Score = 72.8 bits (177), Expect = 8e-13
 Identities = 50/196 (25%), Positives = 82/196 (41%), Gaps = 34/196 (17%)
 Frame = +2

Query: 620  VLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTXXXXXXXXXXXXXNAM 799
            V  V F+  + Q+ SG +D+ + VW ++     Y   GH D+VT              + 
Sbjct: 22   VTCVDFSINTKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLLASGSR 81

Query: 800  DNTVRVW-------------------------DVRPF--APKERCVKIFQGNVHNF---- 886
            D TVR+W                         D + F  A  ++ VK++  +   F    
Sbjct: 82   DKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTVKVWATHRQKFLFSL 141

Query: 887  --EKNLLRCS-WSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEPI 1057
                N +RC+ +SPDG  I + S D+ V +WD +SR  ++    H G +  V FHP    
Sbjct: 142  SQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKSSRECVHSYCEHGGFVTYVDFHPSGTC 201

Query: 1058 ILSASSDKRLYTGEIQ 1105
            I +A  D  +   +++
Sbjct: 202  IAAAGMDNTVKVWDVR 217


>ref|XP_947007.1| PREDICTED: similar to CG7704-PA isoform 1 [Homo sapiens]
          Length = 315

 Score =  122 bits (306), Expect = 8e-28
 Identities = 71/241 (29%), Positives = 119/241 (49%), Gaps = 3/241 (1%)
 Frame = +2

Query: 356  HSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLV 535
            H G V    ++ DG ML + S D  V  W++ +G+ + RL GHT  V  C  +  G  L 
Sbjct: 20   HGGEVNSSAFSPDGQMLLTGSEDGCVYGWETRSGQLLWRLGGHTGPVKFCRFSPDG-HLF 78

Query: 536  CTGSDDGTVKLWDIRKKAAIQTFQNTYQ-VLAVTFNDTSDQIISGGIDNDIKVWDLRQNK 712
             + S D TV+LWD+ +   ++  +   + V  V+F+  S Q+ SGG D  + +WD++  +
Sbjct: 79   ASASCDCTVRLWDVARAKCLRVLKGHQRSVETVSFSPDSRQLASGGWDKRVMLWDVQSGQ 138

Query: 713  LTYTMRGHADSVTXXXXXXXXXXXXXNAMDNTVRVWDVRPFAP--KERCVKIFQGNVHNF 886
            +   + GH DS+               + D+TVR+WD+R   P    + ++   GN+   
Sbjct: 139  MLRLLVGHRDSIQSSDFSPTVNCLATGSWDSTVRIWDLRMVTPAVSHQALEGHSGNI--- 195

Query: 887  EKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEPIILS 1066
                  C        +A+GS D+ +++W  T+  +L +L GH   +  +AF PDE  + S
Sbjct: 196  -----SCLCYSASGLLASGSWDKTIHIWKPTTSSLLIQLKGHVTWVKSIAFSPDELWLAS 250

Query: 1067 A 1069
            A
Sbjct: 251  A 251



 Score =  102 bits (254), Expect = 9e-22
 Identities = 69/251 (27%), Positives = 111/251 (44%), Gaps = 5/251 (1%)
 Frame = +2

Query: 218 LSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDG 397
           L GH G V  C+F P+G   ASA  D  + LW+V         LKGH  +V  + ++ D 
Sbjct: 59  LGGHTGPVKFCRFSPDGHLFASASCDCTVRLWDV-ARAKCLRVLKGHQRSVETVSFSPDS 117

Query: 398 SMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVC--TGSDDGTVKLW 571
             L S   DK V +WD ++G+ ++ L GH   + S   +   P + C  TGS D TV++W
Sbjct: 118 RQLASGGWDKRVMLWDVQSGQMLRLLVGHRDSIQS---SDFSPTVNCLATGSWDSTVRIW 174

Query: 572 DIR---KKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHAD 742
           D+R      + Q  +     ++      S  + SG  D  I +W    + L   ++GH  
Sbjct: 175 DLRMVTPAVSHQALEGHSGNISCLCYSASGLLASGSWDKTIHIWKPTTSSLLIQLKGHVT 234

Query: 743 SVTXXXXXXXXXXXXXNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPD 922
            V                    V+VWD        +C++  +  V +       C+++PD
Sbjct: 235 WVKSIAFSPDELWLASAGYSRMVKVWDCN----TGKCLETLKQGVLDVAHT---CAFTPD 287

Query: 923 GSKIAAGSADR 955
           G  + +G+AD+
Sbjct: 288 GKILVSGAADQ 298



 Score = 87.8 bits (216), Expect = 2e-17
 Identities = 75/291 (25%), Positives = 131/291 (45%), Gaps = 6/291 (2%)
 Frame = +2

Query: 227  HEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSML 406
            H GEV    F P+G  L +   D  +  W           L GH+G V    ++ DG + 
Sbjct: 20   HGGEVNSSAFSPDGQMLLTGSEDGCVYGWETRSG-QLLWRLGGHTGPVKFCRFSPDGHLF 78

Query: 407  FSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKK 586
             SAS D TV +WD    + ++ LKGH   V +   +    QL  +G  D  V LWD++  
Sbjct: 79   ASASCDCTVRLWDVARAKCLRVLKGHQRSVETVSFSPDSRQL-ASGGWDKRVMLWDVQSG 137

Query: 587  AAIQTF-QNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYT---MRGHADSVTX 754
              ++    +   + +  F+ T + + +G  D+ +++WDLR      +   + GH+ +++ 
Sbjct: 138  QMLRLLVGHRDSIQSSDFSPTVNCLATGSWDSTVRIWDLRMVTPAVSHQALEGHSGNIS- 196

Query: 755  XXXXXXXXXXXXNAMDNTVRVWDVRPFAPKERCVKI-FQGNVHNFEKNLLRCSWSPDGSK 931
                         + D T+ +W      P    + I  +G+V  + K++   ++SPD   
Sbjct: 197  CLCYSASGLLASGSWDKTIHIW-----KPTTSSLLIQLKGHV-TWVKSI---AFSPDELW 247

Query: 932  IAAGSADRFVYVWDTTSRRILYKL-PGHAGSINEVAFHPDEPIILSASSDK 1081
            +A+    R V VWD  + + L  L  G     +  AF PD  I++S ++D+
Sbjct: 248  LASAGYSRMVKVWDCNTGKCLETLKQGVLDVAHTCAFTPDGKILVSGAADQ 298



 Score = 70.1 bits (170), Expect = 5e-12
 Identities = 48/179 (26%), Positives = 81/179 (45%), Gaps = 5/179 (2%)
 Frame = +2

Query: 209 IMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYN 388
           + +L GH+  V    F P+   LAS G+D+ ++LW+V         L GH  ++    ++
Sbjct: 98  LRVLKGHQRSVETVSFSPDSRQLASGGWDKRVMLWDVQSG-QMLRLLVGHRDSIQSSDFS 156

Query: 389 TDGSMLFSASTDKTVAVWDSE---TGERVKRLKGHTSFVNS-CYPARRGPQLVCTGSDDG 556
              + L + S D TV +WD          + L+GH+  ++  CY A     L+ +GS D 
Sbjct: 157 PTVNCLATGSWDSTVRIWDLRMVTPAVSHQALEGHSGNISCLCYSA---SGLLASGSWDK 213

Query: 557 TVKLW-DIRKKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMR 730
           T+ +W        IQ   +   V ++ F+     + S G    +KVWD    K   T++
Sbjct: 214 TIHIWKPTTSSLLIQLKGHVTWVKSIAFSPDELWLASAGYSRMVKVWDCNTGKCLETLK 272



 Score = 69.7 bits (169), Expect = 6e-12
 Identities = 41/158 (25%), Positives = 76/158 (48%)
 Frame = +2

Query: 605  QNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTXXXXXXXXXXX 784
            Q+  +V +  F+     +++G  D  +  W+ R  +L + + GH   V            
Sbjct: 19   QHGGEVNSSAFSPDGQMLLTGSEDGCVYGWETRSGQLLWRLGGHTGPVKFCRFSPDGHLF 78

Query: 785  XXNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVY 964
               + D TVR+WDV     + +C+++ +G+    ++++   S+SPD  ++A+G  D+ V 
Sbjct: 79   ASASCDCTVRLWDV----ARAKCLRVLKGH----QRSVETVSFSPDSRQLASGGWDKRVM 130

Query: 965  VWDTTSRRILYKLPGHAGSINEVAFHPDEPIILSASSD 1078
            +WD  S ++L  L GH  SI    F P    + + S D
Sbjct: 131  LWDVQSGQMLRLLVGHRDSIQSSDFSPTVNCLATGSWD 168



 Score = 53.1 bits (126), Expect = 6e-07
 Identities = 31/77 (40%), Positives = 41/77 (53%)
 Frame = +2

Query: 848  RCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSIN 1027
            R VK F    H  E N    ++SPDG  +  GS D  VY W+T S ++L++L GH G + 
Sbjct: 12   RRVKFF--GQHGGEVN--SSAFSPDGQMLLTGSEDGCVYGWETRSGQLLWRLGGHTGPVK 67

Query: 1028 EVAFHPDEPIILSASSD 1078
               F PD  +  SAS D
Sbjct: 68   FCRFSPDGHLFASASCD 84



 Score = 51.2 bits (121), Expect = 2e-06
 Identities = 25/67 (37%), Positives = 35/67 (52%)
 Frame = +2

Query: 905  CSWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEPIILSASSDKR 1084
            C +SPDG   A+ S D  V +WD    + L  L GH  S+  V+F PD   + S   DKR
Sbjct: 69   CRFSPDGHLFASASCDCTVRLWDVARAKCLRVLKGHQRSVETVSFSPDSRQLASGGWDKR 128

Query: 1085 LYTGEIQ 1105
            +   ++Q
Sbjct: 129  VMLWDVQ 135


>ref|NP_060444.2| APG16 autophagy 16-like isoform 2 [Homo sapiens]
          Length = 504

 Score =  121 bits (303), Expect = 2e-27
 Identities = 84/291 (28%), Positives = 136/291 (46%), Gaps = 5/291 (1%)
 Frame = +2

Query: 209  IMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGD-CDNYATLKGHSGAVMELHY 385
            + +   H+GEV   +F P    LA+ G DR + LW V+G+ C+   +L G +  +  + +
Sbjct: 212  LCVFDAHDGEVNAVQFSPGSRLLATGGMDRRVKLWEVFGEKCEFKGSLSGSNAGITSIEF 271

Query: 386  NTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVK 565
            ++ GS L +AS D    +W  +       L GH+  V S        ++V +GS D T+K
Sbjct: 272  DSAGSYLLAASNDFASRIWTVDDYRLRHTLTGHSGKVLSAKFLLDNARIV-SGSHDRTLK 330

Query: 566  LWDIRKKAAIQTFQNTYQVLAVTFND---TSDQIISGGIDNDIKVWDLRQNKLTYTMRGH 736
            LWD+R K  I+T          + ND   T   ++SG  D  I+ WD+R   +   M   
Sbjct: 331  LWDLRSKVCIKTV-----FAGSSCNDIVCTEQCVMSGHFDKKIRFWDIRSESIVREME-L 384

Query: 737  ADSVTXXXXXXXXXXXXXNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWS 916
               +T              + D+ ++V D+R  A K+     F         +  R  +S
Sbjct: 385  LGKITALDLNPERTELLSCSRDDLLKVIDLRTNAIKQ----TFSAPGFKCGSDWTRVVFS 440

Query: 917  PDGSKIAAGSADRFVYVWDTTSRRILYKL-PGHAGSINEVAFHPDEPIILS 1066
            PDGS +AAGSA+  +Y+W   + ++   L   H+ SIN VA+ P    ++S
Sbjct: 441  PDGSYVAAGSAEGSLYIWSVLTGKVEKVLSKQHSSSINAVAWSPSGSHVVS 491


>ref|NP_110430.4| APG16 autophagy 16-like isoform 1 [Homo sapiens]
          Length = 523

 Score =  121 bits (303), Expect = 2e-27
 Identities = 84/291 (28%), Positives = 136/291 (46%), Gaps = 5/291 (1%)
 Frame = +2

Query: 209  IMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGD-CDNYATLKGHSGAVMELHY 385
            + +   H+GEV   +F P    LA+ G DR + LW V+G+ C+   +L G +  +  + +
Sbjct: 231  LCVFDAHDGEVNAVQFSPGSRLLATGGMDRRVKLWEVFGEKCEFKGSLSGSNAGITSIEF 290

Query: 386  NTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVK 565
            ++ GS L +AS D    +W  +       L GH+  V S        ++V +GS D T+K
Sbjct: 291  DSAGSYLLAASNDFASRIWTVDDYRLRHTLTGHSGKVLSAKFLLDNARIV-SGSHDRTLK 349

Query: 566  LWDIRKKAAIQTFQNTYQVLAVTFND---TSDQIISGGIDNDIKVWDLRQNKLTYTMRGH 736
            LWD+R K  I+T          + ND   T   ++SG  D  I+ WD+R   +   M   
Sbjct: 350  LWDLRSKVCIKTV-----FAGSSCNDIVCTEQCVMSGHFDKKIRFWDIRSESIVREME-L 403

Query: 737  ADSVTXXXXXXXXXXXXXNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWS 916
               +T              + D+ ++V D+R  A K+     F         +  R  +S
Sbjct: 404  LGKITALDLNPERTELLSCSRDDLLKVIDLRTNAIKQ----TFSAPGFKCGSDWTRVVFS 459

Query: 917  PDGSKIAAGSADRFVYVWDTTSRRILYKL-PGHAGSINEVAFHPDEPIILS 1066
            PDGS +AAGSA+  +Y+W   + ++   L   H+ SIN VA+ P    ++S
Sbjct: 460  PDGSYVAAGSAEGSLYIWSVLTGKVEKVLSKQHSSSINAVAWSPSGSHVVS 510


>ref|XP_934992.1| PREDICTED: similar to CG7704-PA isoform 1 [Homo sapiens]
          Length = 315

 Score =  120 bits (300), Expect = 4e-27
 Identities = 70/239 (29%), Positives = 118/239 (49%), Gaps = 1/239 (0%)
 Frame = +2

Query: 356  HSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLV 535
            H G V    ++ DG ML + S D  V  W++ +G+ + RL GHT  V  C  +  G  L 
Sbjct: 20   HGGEVNSSAFSPDGQMLLTGSEDGCVYGWETRSGQLLWRLGGHTGPVKFCRFSPDG-HLF 78

Query: 536  CTGSDDGTVKLWDIRKKAAIQTFQNTYQ-VLAVTFNDTSDQIISGGIDNDIKVWDLRQNK 712
             + S D TV+LWD+ +   ++  +   + V  V+F+  S Q+ SGG D  + +WD++  +
Sbjct: 79   ASASCDCTVRLWDVARAKCLRVLKGHQRSVETVSFSPDSRQLASGGWDKRVMLWDVQSGQ 138

Query: 713  LTYTMRGHADSVTXXXXXXXXXXXXXNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEK 892
            +   + GH DS+               + D+TV +WD+R   P      +    +     
Sbjct: 139  MLRLLVGHRDSIQSSDFSPTVNCLATGSWDSTVHIWDLRMVTP-----AVSHQALEGHSA 193

Query: 893  NLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEPIILSA 1069
            N+    +S  G  +A+GS D+ +++W  T+  +L +L GH   +  +AF PDE  + SA
Sbjct: 194  NISCLCYSASG-LLASGSWDKTIHIWKPTTSSLLIQLKGHVTWVKSIAFSPDELWLASA 251



 Score =  101 bits (252), Expect = 2e-21
 Identities = 69/251 (27%), Positives = 110/251 (43%), Gaps = 5/251 (1%)
 Frame = +2

Query: 218 LSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDG 397
           L GH G V  C+F P+G   ASA  D  + LW+V         LKGH  +V  + ++ D 
Sbjct: 59  LGGHTGPVKFCRFSPDGHLFASASCDCTVRLWDV-ARAKCLRVLKGHQRSVETVSFSPDS 117

Query: 398 SMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVC--TGSDDGTVKLW 571
             L S   DK V +WD ++G+ ++ L GH   + S   +   P + C  TGS D TV +W
Sbjct: 118 RQLASGGWDKRVMLWDVQSGQMLRLLVGHRDSIQS---SDFSPTVNCLATGSWDSTVHIW 174

Query: 572 DIR---KKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHAD 742
           D+R      + Q  +     ++      S  + SG  D  I +W    + L   ++GH  
Sbjct: 175 DLRMVTPAVSHQALEGHSANISCLCYSASGLLASGSWDKTIHIWKPTTSSLLIQLKGHVT 234

Query: 743 SVTXXXXXXXXXXXXXNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPD 922
            V                    V+VWD        +C++  +  V +       C+++PD
Sbjct: 235 WVKSIAFSPDELWLASAGYSRMVKVWDCN----TGKCLETLKQGVLDVAHT---CAFTPD 287

Query: 923 GSKIAAGSADR 955
           G  + +G+AD+
Sbjct: 288 GKILVSGAADQ 298



 Score = 86.3 bits (212), Expect = 7e-17
 Identities = 75/291 (25%), Positives = 130/291 (44%), Gaps = 6/291 (2%)
 Frame = +2

Query: 227  HEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSML 406
            H GEV    F P+G  L +   D  +  W           L GH+G V    ++ DG + 
Sbjct: 20   HGGEVNSSAFSPDGQMLLTGSEDGCVYGWETRSG-QLLWRLGGHTGPVKFCRFSPDGHLF 78

Query: 407  FSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKK 586
             SAS D TV +WD    + ++ LKGH   V +   +    QL  +G  D  V LWD++  
Sbjct: 79   ASASCDCTVRLWDVARAKCLRVLKGHQRSVETVSFSPDSRQL-ASGGWDKRVMLWDVQSG 137

Query: 587  AAIQTF-QNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYT---MRGHADSVTX 754
              ++    +   + +  F+ T + + +G  D+ + +WDLR      +   + GH+ +++ 
Sbjct: 138  QMLRLLVGHRDSIQSSDFSPTVNCLATGSWDSTVHIWDLRMVTPAVSHQALEGHSANIS- 196

Query: 755  XXXXXXXXXXXXNAMDNTVRVWDVRPFAPKERCVKI-FQGNVHNFEKNLLRCSWSPDGSK 931
                         + D T+ +W      P    + I  +G+V  + K++   ++SPD   
Sbjct: 197  CLCYSASGLLASGSWDKTIHIW-----KPTTSSLLIQLKGHV-TWVKSI---AFSPDELW 247

Query: 932  IAAGSADRFVYVWDTTSRRILYKL-PGHAGSINEVAFHPDEPIILSASSDK 1081
            +A+    R V VWD  + + L  L  G     +  AF PD  I++S ++D+
Sbjct: 248  LASAGYSRMVKVWDCNTGKCLETLKQGVLDVAHTCAFTPDGKILVSGAADQ 298



 Score = 71.2 bits (173), Expect = 2e-12
 Identities = 42/167 (25%), Positives = 79/167 (47%)
 Frame = +2

Query: 605  QNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTXXXXXXXXXXX 784
            Q+  +V +  F+     +++G  D  +  W+ R  +L + + GH   V            
Sbjct: 19   QHGGEVNSSAFSPDGQMLLTGSEDGCVYGWETRSGQLLWRLGGHTGPVKFCRFSPDGHLF 78

Query: 785  XXNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVY 964
               + D TVR+WDV     + +C+++ +G+  + E      S+SPD  ++A+G  D+ V 
Sbjct: 79   ASASCDCTVRLWDVA----RAKCLRVLKGHQRSVET----VSFSPDSRQLASGGWDKRVM 130

Query: 965  VWDTTSRRILYKLPGHAGSINEVAFHPDEPIILSASSDKRLYTGEIQ 1105
            +WD  S ++L  L GH  SI    F P    + + S D  ++  +++
Sbjct: 131  LWDVQSGQMLRLLVGHRDSIQSSDFSPTVNCLATGSWDSTVHIWDLR 177



 Score = 70.1 bits (170), Expect = 5e-12
 Identities = 48/179 (26%), Positives = 82/179 (45%), Gaps = 5/179 (2%)
 Frame = +2

Query: 209 IMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYN 388
           + +L GH+  V    F P+   LAS G+D+ ++LW+V         L GH  ++    ++
Sbjct: 98  LRVLKGHQRSVETVSFSPDSRQLASGGWDKRVMLWDVQSG-QMLRLLVGHRDSIQSSDFS 156

Query: 389 TDGSMLFSASTDKTVAVWDSE---TGERVKRLKGHTSFVNS-CYPARRGPQLVCTGSDDG 556
              + L + S D TV +WD          + L+GH++ ++  CY A     L+ +GS D 
Sbjct: 157 PTVNCLATGSWDSTVHIWDLRMVTPAVSHQALEGHSANISCLCYSA---SGLLASGSWDK 213

Query: 557 TVKLW-DIRKKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMR 730
           T+ +W        IQ   +   V ++ F+     + S G    +KVWD    K   T++
Sbjct: 214 TIHIWKPTTSSLLIQLKGHVTWVKSIAFSPDELWLASAGYSRMVKVWDCNTGKCLETLK 272



 Score = 53.1 bits (126), Expect = 6e-07
 Identities = 31/77 (40%), Positives = 41/77 (53%)
 Frame = +2

Query: 848  RCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSIN 1027
            R VK F    H  E N    ++SPDG  +  GS D  VY W+T S ++L++L GH G + 
Sbjct: 12   RRVKFF--GQHGGEVN--SSAFSPDGQMLLTGSEDGCVYGWETRSGQLLWRLGGHTGPVK 67

Query: 1028 EVAFHPDEPIILSASSD 1078
               F PD  +  SAS D
Sbjct: 68   FCRFSPDGHLFASASCD 84


  Database: RefSeqHP
    Posted date:  Aug 2, 2006 12:57 AM
  Number of letters in database: 17,774,539
  Number of sequences in database:  39,411
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 57,818,614
Number of Sequences: 39411
Number of extensions: 1410124
Number of successful extensions: 6384
Number of sequences better than 1.0e-05: 10
Number of HSP's better than  0.0 without gapping: 3228
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4686
length of database: 17,774,539
effective HSP length: 107
effective length of database: 13,557,562
effective search space used: 5612830668
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

Search to RefSeqSP

BLASTX 2.2.10 [Oct-19-2004]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= OVRM1_0112_F03
         (1567 letters)

Database: RefSeqSP 
           1040 sequences; 434,620 total letters

Searching...done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_999415.1| platelet-activating factor acetylhydrolase Ib-a...   109   2e-25
Alignment   gi|NP_999497.1| G-beta like protein [Sus scrofa]                      90   1e-19
Alignment   gi|NP_001012296.1| fizzy/cell division cycle 20 related 1 [Sus ...    59   3e-10

>ref|NP_999415.1| platelet-activating factor acetylhydrolase Ib-alpha subunit [Sus
            scrofa]
          Length = 410

 Score =  109 bits (273), Expect = 2e-25
 Identities = 81/274 (29%), Positives = 124/274 (45%), Gaps = 22/274 (8%)
 Frame = +2

Query: 332  DNYATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYP 511
            + YA L GH   V  + ++   S++ SAS D T+ VWD ETG+  + LKGHT  V     
Sbjct: 100  EKYA-LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISF 158

Query: 512  ARRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIK 688
               G +L+ + S D T+KLWD +    I+T   + + V +V      D I+S   D  IK
Sbjct: 159  DHSG-KLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSAARDKTIK 217

Query: 689  VWDLRQNKLTYTMRGHADSVTXXXXXXXXXXXXXNAMDNTVRVWDVRPFAPKERCVKIFQ 868
            +W+++      T  GH + V               + D TVRVW V   A KE   ++ +
Sbjct: 218  MWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVV---ATKECKAELRE 274

Query: 869  GNVHNFEKNLLRC-SWSPDGSK--------------------IAAGSADRFVYVWDTTSR 985
                   ++++ C SW+P+ S                     + +GS D+ + +WD ++ 
Sbjct: 275  ------HEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTG 328

Query: 986  RILYKLPGHAGSINEVAFHPDEPIILSASSDKRL 1087
              L  L GH   +  V FH     ILS + DK L
Sbjct: 329  MCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTL 362



 Score =  102 bits (254), Expect = 2e-23
 Identities = 78/315 (24%), Positives = 136/315 (43%), Gaps = 21/315 (6%)
 Frame = +2

Query: 218  LSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDG 397
            LSGH   V    FHP  S + SA  D  I +W+ Y   D   TLKGH+ +V ++ ++  G
Sbjct: 104  LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWD-YETGDFERTLKGHTDSVQDISFDHSG 162

Query: 398  SMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDI 577
             +L S S D T+ +WD +  E ++ + GH   V+S      G  +V + + D T+K+W++
Sbjct: 163  KLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIV-SAARDKTIKMWEV 221

Query: 578  RKKAAIQTFQNTYQ-VLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTX 754
            +    ++TF    + V  V  N     I S   D  ++VW +   +    +R H   V  
Sbjct: 222  QTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVEC 281

Query: 755  XXXXXXXXXXXXN--------------------AMDNTVRVWDVRPFAPKERCVKIFQGN 874
                        +                    + D T+++WDV        C+    G+
Sbjct: 282  ISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVST----GMCLMTLVGH 337

Query: 875  VHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEP 1054
              N+ + +L   +   G  I + + D+ + VWD  ++R +  L  H   +  + FH   P
Sbjct: 338  -DNWVRGVL---FHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAP 393

Query: 1055 IILSASSDKRLYTGE 1099
             +++ S D+ +   E
Sbjct: 394  YVVTGSVDQTVKVWE 408



 Score = 88.6 bits (218), Expect = 4e-19
 Identities = 66/229 (28%), Positives = 97/229 (42%), Gaps = 22/229 (9%)
 Frame = +2

Query: 209 IMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVY-GDCDNYATLKGHSGAVMELHY 385
           I  + GH+  V      PNG  + SA  D+ I +W V  G C    T  GH   V  +  
Sbjct: 185 IRTMHGHDHNVSSVAIMPNGDHIVSAARDKTIKMWEVQTGYC--VKTFTGHREWVRMVRP 242

Query: 386 NTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFV-------NSCYPA---------- 514
           N DG+++ S S D+TV VW   T E    L+ H   V        S Y +          
Sbjct: 243 NQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETK 302

Query: 515 ---RRGPQLVCTGSDDGTVKLWDIRKKAAIQTF-QNTYQVLAVTFNDTSDQIISGGIDND 682
              + GP L+ +GS D T+K+WD+     + T   +   V  V F+     I+S   D  
Sbjct: 303 KSGKPGPFLL-SGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKT 361

Query: 683 IKVWDLRQNKLTYTMRGHADSVTXXXXXXXXXXXXXNAMDNTVRVWDVR 829
           ++VWD +  +   T+  H   VT              ++D TV+VW+ R
Sbjct: 362 LRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410



 Score = 55.8 bits (133), Expect = 3e-09
 Identities = 47/188 (25%), Positives = 78/188 (41%), Gaps = 3/188 (1%)
 Frame = +2

Query: 578  RKKAAIQTFQNTYQVLAVTFNDTSDQIISGGI---DNDIKVWDLRQNKLTYTMRGHADSV 748
            +K  ++   Q     L    N+  ++  SGG      D K W  R  +  Y + GH   V
Sbjct: 53   KKWTSVIRLQKKVMELESKLNEAKEEFTSGGPLGQKRDPKEWIPRPPE-KYALSGHRSPV 111

Query: 749  TXXXXXXXXXXXXXNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGS 928
            T              + D T++VWD       ER +K    +V +        S+   G 
Sbjct: 112  TRVIFHPVFSVMVSASEDATIKVWDYET-GDFERTLKGHTDSVQDI-------SFDHSGK 163

Query: 929  KIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEPIILSASSDKRLYTGEIQ* 1108
             +A+ SAD  + +WD      +  + GH  +++ VA  P+   I+SA+ DK +   E+Q 
Sbjct: 164  LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSAARDKTIKMWEVQT 223

Query: 1109 RYGMEDST 1132
             Y ++  T
Sbjct: 224  GYCVKTFT 231


>ref|NP_999497.1| G-beta like protein [Sus scrofa]
          Length = 317

 Score = 90.1 bits (222), Expect = 1e-19
 Identities = 83/304 (27%), Positives = 120/304 (39%), Gaps = 50/304 (16%)
 Frame = +2

Query: 218 LSGHEGEVYCCKFHPN-GSTLASAGFDRLILLWNVYGDCDNYA----TLKGHSGAVMELH 382
           L GH G V      P     + SA  D+ I++W +  D  NY      L+GHS  V ++ 
Sbjct: 11  LKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVV 70

Query: 383 YNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTV 562
            ++DG    S S D T+ +WD  TG   +R  GHT  V S   +    Q+V +GS D T+
Sbjct: 71  ISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIV-SGSRDKTI 129

Query: 563 KLWDIRK--KAAIQTFQNTYQVLAVTFNDTSDQ--IISGGIDNDIKVWDLRQNKLTYTMR 730
           KLW+     K  +Q   ++  V  V F+  S    I+S G D  +KVW+L   KL     
Sbjct: 130 KLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHI 189

Query: 731 GHADSVTXXXXXXXXXXXXXNAMDNTVRVWDVRP-----------------FAPKER--- 850
           GH   +                 D    +WD+                   F+P      
Sbjct: 190 GHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDIINALCFSPNRYWLC 249

Query: 851 -----CVKIF--QGN--VHNFEKNLLRCS------------WSPDGSKIAAGSADRFVYV 967
                 +KI+  +G   V   ++ ++  S            WS DG  + AG  D  V V
Sbjct: 250 AATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRV 309

Query: 968 WDTT 979
           W  T
Sbjct: 310 WQVT 313


>ref|NP_001012296.1| fizzy/cell division cycle 20 related 1 [Sus scrofa]
          Length = 493

 Score = 58.9 bits (141), Expect = 3e-10
 Identities = 49/211 (23%), Positives = 86/211 (40%), Gaps = 5/211 (2%)
 Frame = +2

Query: 209 IMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGD-CDNYATLKGHSGAVMELHY 385
           + +L GH   V    +  N   L+S   DR+IL  ++      +   L+GH   V  L +
Sbjct: 264 LSMLEGHTARVGALAW--NADQLSSGSRDRMILQRDIRTPPLQSERRLQGHRQEVCGLKW 321

Query: 386 NTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSC--YPARRGPQLVCTGSDDGT 559
           +TD  +L S   D  + VW+  +   V++   H + V +    P + G      G+ D  
Sbjct: 322 STDHQLLASGGNDNKLLVWNHSSLSPVQQYTEHLAAVKAIAWSPHQHGLLASGGGTADRC 381

Query: 560 VKLWDIRKKAAIQTFQNTYQVLAVTFNDTSDQIIS--GGIDNDIKVWDLRQNKLTYTMRG 733
           ++ W+      +Q      QV  + ++  +++++S  G   N I VW          + G
Sbjct: 382 IRFWNTLTGQPLQCIDTGSQVCNLAWSKHANELVSTHGYSQNQILVWKYPSLTQVAKLTG 441

Query: 734 HADSVTXXXXXXXXXXXXXNAMDNTVRVWDV 826
           H+  V               A D T+R W+V
Sbjct: 442 HSYRVLYLAMSPDGEAIVTGAGDETLRFWNV 472



 Score = 55.1 bits (131), Expect = 5e-09
 Identities = 58/281 (20%), Positives = 112/281 (39%), Gaps = 12/281 (4%)
 Frame = +2

Query: 281  SAGFDRLILLWNVYGDCDNYAT----LKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDS 448
            S G    + LW+    C +  T    L     +V  + ++  G+++   +    V +WD+
Sbjct: 202  SVGLGTCVYLWSA---CTSQVTRLCDLSVEGDSVTSVGWSERGNLVAVGTHKGFVQIWDA 258

Query: 449  ETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRK---KAAIQTFQNTYQ 619
              G+++  L+GHT+ V +   A    QL  +GS D  +   DIR    ++  +   +  +
Sbjct: 259  AAGKKLSMLEGHTARVGAL--AWNADQL-SSGSRDRMILQRDIRTPPLQSERRLQGHRQE 315

Query: 620  VLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTXXX---XXXXXXXXXX 790
            V  + ++     + SGG DN + VW+            H  +V                 
Sbjct: 316  VCGLKWSTDHQLLASGGNDNKLLVWNHSSLSPVQQYTEHLAAVKAIAWSPHQHGLLASGG 375

Query: 791  NAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAA--GSADRFVY 964
               D  +R W+     P + C+        +    +   +WS   +++ +  G +   + 
Sbjct: 376  GTADRCIRFWNTLTGQPLQ-CI--------DTGSQVCNLAWSKHANELVSTHGYSQNQIL 426

Query: 965  VWDTTSRRILYKLPGHAGSINEVAFHPDEPIILSASSDKRL 1087
            VW   S   + KL GH+  +  +A  PD   I++ + D+ L
Sbjct: 427  VWKYPSLTQVAKLTGHSYRVLYLAMSPDGEAIVTGAGDETL 467


  Database: RefSeqSP
    Posted date:  Aug 1, 2006  7:14 PM
  Number of letters in database: 434,620
  Number of sequences in database:  1040
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,409,242
Number of Sequences: 1040
Number of extensions: 34178
Number of successful extensions: 129
Number of sequences better than 1.0e-05: 3
Number of HSP's better than  0.0 without gapping: 60
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 79
length of database: 434,620
effective HSP length: 81
effective length of database: 350,380
effective search space used: 154167200
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

Search to RefSeqMP

BLASTX 2.2.10 [Oct-19-2004]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= OVRM1_0112_F03
         (1567 letters)

Database: RefSeqMP 
           45,328 sequences; 21,768,885 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_079921.1| U5 snRNP-specific protein (Prp8-binding) [Mus m...   553   e-169
Alignment   gi|NP_081389.1| WD repeat domain 5B [Mus musculus]                   166   8e-41
Alignment   gi|NP_543124.1| WD repeat domain 5 [Mus musculus]                    157   4e-38
Alignment   gi|NP_081630.1| WD repeat domain 51A [Mus musculus]                  124   4e-28
Alignment   gi|NP_082016.1| WD repeat domain 51B [Mus musculus]                  121   2e-27
Alignment   gi|NP_084122.2| APG16L beta isoform [Mus musculus]                   120   4e-27
Alignment   gi|NP_083963.1| hypothetical protein LOC76646 [Mus musculus]         119   9e-27
Alignment   gi|NP_083081.2| katanin p80 (WD40-containing) subunit B 1 [Mus ...   118   2e-26
Alignment   gi|NP_038653.1| platelet-activating factor acetylhydrolase, iso...   109   7e-24
Alignment   gi|NP_598727.1| TAF5-like RNA polymerase II, p300/CBP-associate...   103   4e-22

>ref|NP_079921.1| U5 snRNP-specific protein (Prp8-binding) [Mus musculus]
          Length = 370

 Score =  553 bits (1424), Expect(2) = e-169
 Identities = 269/313 (85%), Positives = 271/313 (86%)
 Frame = +2

Query: 32  MIEQQKRKGPELPLVPVKRQRHEXXXXXXXXXXXXXXXXXXXXXXXXXXXXRCSSLQAPI 211
           MIEQQKRKGPELPLVPVKR RHE                            RCSSLQAPI
Sbjct: 1   MIEQQKRKGPELPLVPVKRPRHELLLGAAGAGPGAGPQQATPGALLQAGPPRCSSLQAPI 60

Query: 212 MLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNT 391
           MLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNT
Sbjct: 61  MLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNT 120

Query: 392 DGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLW 571
           DGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLW
Sbjct: 121 DGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLW 180

Query: 572 DIRKKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVT 751
           DIRK+AA+QTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVT
Sbjct: 181 DIRKRAAVQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVT 240

Query: 752 XXXXXXXXXXXXXNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSK 931
                        NAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSK
Sbjct: 241 DLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSK 300

Query: 932 IAAGSADRFVYVW 970
           IAAGSADRFVYVW
Sbjct: 301 IAAGSADRFVYVW 313



 Score = 63.5 bits (153), Expect(2) = e-169
 Identities = 32/50 (64%), Positives = 34/50 (68%)
 Frame = +3

Query: 975  PQAGGFCINYPAMLAPSMKWLSTLTNQSFSQHPVTRDCIRGRFSEDMEWK 1124
            PQA G C +    LAPSMKWLST T+ S SQHPVTR C   R SED EWK
Sbjct: 315  PQAEGSCTSCLVTLAPSMKWLSTPTSPSSSQHPVTRGCTWVRSSEDGEWK 364


>ref|NP_081389.1| WD repeat domain 5B [Mus musculus]
          Length = 328

 Score =  166 bits (419), Expect = 8e-41
 Identities = 98/291 (33%), Positives = 154/291 (52%), Gaps = 4/291 (1%)
 Frame = +2

Query: 212  MLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVY-GDCDNYATLKGHSGAVMELHYN 388
            + L+GH   +   KF PNG  LAS+  D LI++W  Y G+C    TL GHS  + ++ ++
Sbjct: 33   LTLAGHSAAISSVKFSPNGEWLASSAADALIIIWGAYDGNCKK--TLYGHSLEISDVAWS 90

Query: 389  TDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKL 568
            +D S L SAS DKT+ VWD  +G+ +K LKGH+ FV  C        L+ +GS D +VK+
Sbjct: 91   SDSSRLVSASDDKTLKVWDMRSGKCLKTLKGHSDFV-FCCDFNPPSNLIVSGSFDESVKI 149

Query: 569  WDIRKKAAIQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHAD- 742
            W+++    ++T   ++  + AV FN     I+SG  D   ++WD    +   T+    + 
Sbjct: 150  WEVKTGKCLKTLSAHSDPISAVNFNCNGSLIVSGSYDGLCRIWDAASGQCLRTLADEGNP 209

Query: 743  SVTXXXXXXXXXXXXXNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPD 922
             V+               +DNT+++WD      + RC+K + G  H  EK  L  S+S  
Sbjct: 210  PVSFVKFSPNGKYILTATLDNTLKLWDY----SRGRCLKTYTG--HKNEKYCLFASFSVT 263

Query: 923  GSK-IAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEPIILSAS 1072
            G K + +GS D  VY+W+  ++ I+ +L GH   +   A HP + II SA+
Sbjct: 264  GRKWVVSGSEDNMVYIWNLQTKEIVQRLQGHTDVVISAACHPTKNIIASAA 314



 Score =  101 bits (252), Expect = 2e-21
 Identities = 57/208 (27%), Positives = 103/208 (49%), Gaps = 7/208 (3%)
 Frame = +2

Query: 218 LSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVY-GDCDNYATLKGHSGAVMELHYNTD 394
           L GH   V+CC F+P  + + S  FD  + +W V  G C    TL  HS  +  +++N +
Sbjct: 119 LKGHSDFVFCCDFNPPSNLIVSGSFDESVKIWEVKTGKC--LKTLSAHSDPISAVNFNCN 176

Query: 395 GSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWD 574
           GS++ S S D    +WD+ +G+ ++ L    +   S        + + T + D T+KLWD
Sbjct: 177 GSLIVSGSYDGLCRIWDAASGQCLRTLADEGNPPVSFVKFSPNGKYILTATLDNTLKLWD 236

Query: 575 IRKKAAIQTF---QNTYQVLAVTFNDTSDQ-IISGGIDNDIKVWDLRQNKLTYTMRGHAD 742
             +   ++T+   +N    L  +F+ T  + ++SG  DN + +W+L+  ++   ++GH D
Sbjct: 237 YSRGRCLKTYTGHKNEKYCLFASFSVTGRKWVVSGSEDNMVYIWNLQTKEIVQRLQGHTD 296

Query: 743 SVTXXXXXXXXXXXXXNAMDN--TVRVW 820
            V               A++N  T++VW
Sbjct: 297 VVISAACHPTKNIIASAALENDKTIKVW 324



 Score = 51.6 bits (122), Expect = 2e-06
 Identities = 34/131 (25%), Positives = 60/131 (45%)
 Frame = +2

Query: 713  LTYTMRGHADSVTXXXXXXXXXXXXXNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEK 892
            L  T+ GH+ +++             +A D  + +W     A    C K   G  H+ E 
Sbjct: 31   LRLTLAGHSAAISSVKFSPNGEWLASSAADALIIIWG----AYDGNCKKTLYG--HSLE- 83

Query: 893  NLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEPIILSAS 1072
             +   +WS D S++ + S D+ + VWD  S + L  L GH+  +    F+P   +I+S S
Sbjct: 84   -ISDVAWSSDSSRLVSASDDKTLKVWDMRSGKCLKTLKGHSDFVFCCDFNPPSNLIVSGS 142

Query: 1073 SDKRLYTGEIQ 1105
             D+ +   E++
Sbjct: 143  FDESVKIWEVK 153


>ref|NP_543124.1| WD repeat domain 5 [Mus musculus]
          Length = 334

 Score =  157 bits (396), Expect = 4e-38
 Identities = 96/290 (33%), Positives = 153/290 (52%), Gaps = 5/290 (1%)
 Frame = +2

Query: 218  LSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDG 397
            L+GH   V   KF PNG  LAS+  D+LI +W  Y D     T+ GH   + ++ +++D 
Sbjct: 41   LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAY-DGKFEKTISGHKLGISDVAWSSDS 99

Query: 398  SMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQ--LVCTGSDDGTVKLW 571
            ++L SAS DKT+ +WD  +G+ +K LKGH+++V  C      PQ  L+ +GS D +V++W
Sbjct: 100  NLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCC---NFNPQSNLIVSGSFDESVRIW 156

Query: 572  DIRKKAAIQTF-QNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHAD-S 745
            D++    ++T   ++  V AV FN     I+S   D   ++WD    +   T+    +  
Sbjct: 157  DVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPP 216

Query: 746  VTXXXXXXXXXXXXXNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDG 925
            V+               +DNT+++WD      K +C+K + G  H  EK  +  ++S  G
Sbjct: 217  VSFVKFSPNGKYILAATLDNTLKLWDY----SKGKCLKTYTG--HKNEKYCIFANFSVTG 270

Query: 926  SK-IAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEPIILSAS 1072
             K I +GS D  VY+W+  ++ I+ KL GH   +   A HP E II SA+
Sbjct: 271  GKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAA 320



 Score =  106 bits (265), Expect = 6e-23
 Identities = 60/208 (28%), Positives = 103/208 (49%), Gaps = 7/208 (3%)
 Frame = +2

Query: 218 LSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVY-GDCDNYATLKGHSGAVMELHYNTD 394
           L GH   V+CC F+P  + + S  FD  + +W+V  G C    TL  HS  V  +H+N D
Sbjct: 125 LKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKC--LKTLPAHSDPVSAVHFNRD 182

Query: 395 GSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWD 574
           GS++ S+S D    +WD+ +G+ +K L    +   S        + +   + D T+KLWD
Sbjct: 183 GSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWD 242

Query: 575 IRKKAAIQTF---QNTYQVLAVTFNDTSDQ-IISGGIDNDIKVWDLRQNKLTYTMRGHAD 742
             K   ++T+   +N    +   F+ T  + I+SG  DN + +W+L+  ++   ++GH D
Sbjct: 243 YSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTD 302

Query: 743 SVTXXXXXXXXXXXXXNAMDN--TVRVW 820
            V               A++N  T+++W
Sbjct: 303 VVISTACHPTENIIASAALENDKTIKLW 330



 Score = 73.9 bits (180), Expect = 4e-13
 Identities = 41/157 (26%), Positives = 74/157 (47%)
 Frame = +2

Query: 608  NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTXXXXXXXXXXXX 787
            +T  V +V F+   + + S   D  IK+W     K   T+ GH   ++            
Sbjct: 44   HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLV 103

Query: 788  XNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYV 967
              + D T+++WDV       +C+K  +G+       +  C+++P  + I +GS D  V +
Sbjct: 104  SASDDKTLKIWDVS----SGKCLKTLKGH----SNYVFCCNFNPQSNLIVSGSFDESVRI 155

Query: 968  WDTTSRRILYKLPGHAGSINEVAFHPDEPIILSASSD 1078
            WD  + + L  LP H+  ++ V F+ D  +I+S+S D
Sbjct: 156  WDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYD 192



 Score = 50.1 bits (118), Expect = 7e-06
 Identities = 26/131 (19%), Positives = 58/131 (44%)
 Frame = +2

Query: 713  LTYTMRGHADSVTXXXXXXXXXXXXXNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEK 892
            L +T+ GH  +V+             ++ D  +++W              F+  +   + 
Sbjct: 37   LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGK--------FEKTISGHKL 88

Query: 893  NLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEPIILSAS 1072
             +   +WS D + + + S D+ + +WD +S + L  L GH+  +    F+P   +I+S S
Sbjct: 89   GISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGS 148

Query: 1073 SDKRLYTGEIQ 1105
             D+ +   +++
Sbjct: 149  FDESVRIWDVK 159


>ref|NP_081630.1| WD repeat domain 51A [Mus musculus]
          Length = 405

 Score =  124 bits (310), Expect = 4e-28
 Identities = 86/289 (29%), Positives = 127/289 (43%), Gaps = 1/289 (0%)
 Frame = +2

Query: 224  GHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSM 403
            GH   V C  F  N   LAS   D  +++W++      Y    GH  AV  ++++  G +
Sbjct: 17   GHRDAVTCVDFSLNTKHLASGSMDSTLMIWHMKSQSRAYR-FTGHKDAVTCVNFSPSGHL 75

Query: 404  LFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDI-R 580
            L S S DKTV +W           + HT+ V S +    G  LV T SDD TVK+W   R
Sbjct: 76   LASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSLV-TASDDKTVKVWSTHR 134

Query: 581  KKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTXXX 760
            ++      Q+   V    F+     I+S   D  +K+WD    +  ++   H   VT   
Sbjct: 135  QRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECIHSYCEHGGFVTYVD 194

Query: 761  XXXXXXXXXXNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAA 940
                        MDNTV+VWD R      R ++ +Q  +H+   N L  S+ P G+ +  
Sbjct: 195  FHPSGTCIAAAGMDNTVKVWDART----HRLLQHYQ--LHSAAVNAL--SFHPSGNYLIT 246

Query: 941  GSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEPIILSASSDKRL 1087
             S+D  + + D    R+LY L GH G    VAF        S  SD+++
Sbjct: 247  ASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQV 295



 Score =  109 bits (272), Expect = 9e-24
 Identities = 72/253 (28%), Positives = 121/253 (47%), Gaps = 3/253 (1%)
 Frame = +2

Query: 221 SGHEGEVYCCKFHPNGSTLASAGFDRLILLW--NVYGDCDNYATLKGHSGAVMELHYNTD 394
           +GH+  V C  F P+G  LAS   D+ + +W  NV G+       + H+  V  +H+ +D
Sbjct: 58  TGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGES---TVFRAHTATVRSVHFCSD 114

Query: 395 GSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWD 574
           G  L +AS DKTV VW +     +  L  H ++V  C       +L+ + SDD TVKLWD
Sbjct: 115 GQSLVTASDDKTVKVWSTHRQRFLFSLTQHINWVR-CAKFSPDGRLIVSASDDKTVKLWD 173

Query: 575 IRKKAAIQTF-QNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVT 751
              +  I ++ ++   V  V F+ +   I + G+DN +KVWD R ++L    + H+ +V 
Sbjct: 174 KTSRECIHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDARTHRLLQHYQLHSAAVN 233

Query: 752 XXXXXXXXXXXXXNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSK 931
                         + D+T+++ D+     + R +      +H  +      ++S  G  
Sbjct: 234 ALSFHPSGNYLITASSDSTLKILDLM----EGRLLY----TLHGHQGPATTVAFSRTGEY 285

Query: 932 IAAGSADRFVYVW 970
            A+G +D  V VW
Sbjct: 286 FASGGSDEQVMVW 298



 Score =  100 bits (250), Expect = 3e-21
 Identities = 65/250 (26%), Positives = 113/250 (45%), Gaps = 4/250 (1%)
 Frame = +2

Query: 350  KGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQ 529
            KGH  AV  + ++ +   L S S D T+ +W  ++  R  R  GH   V +C        
Sbjct: 16   KGHRDAVTCVDFSLNTKHLASGSMDSTLMIWHMKSQSRAYRFTGHKDAV-TCVNFSPSGH 74

Query: 530  LVCTGSDDGTVKLWDIRKKAAIQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQ 706
            L+ +GS D TV++W    K     F+ +T  V +V F      +++   D  +KVW   +
Sbjct: 75   LLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSLVTASDDKTVKVWSTHR 134

Query: 707  NKLTYTMRGHADSVTXXXXXXXXXXXXXNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNF 886
             +  +++  H + V               + D TV++WD           K  +  +H++
Sbjct: 135  QRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWD-----------KTSRECIHSY 183

Query: 887  EKN---LLRCSWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEPI 1057
             ++   +    + P G+ IAA   D  V VWD  + R+L     H+ ++N ++FHP    
Sbjct: 184  CEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDARTHRLLQHYQLHSAAVNALSFHPSGNY 243

Query: 1058 ILSASSDKRL 1087
            +++ASSD  L
Sbjct: 244  LITASSDSTL 253



 Score = 75.1 bits (183), Expect = 2e-13
 Identities = 47/166 (28%), Positives = 79/166 (47%), Gaps = 7/166 (4%)
 Frame = +2

Query: 218 LSGHEGEVYCCKFHPNGSTLASAGFDRLILLWN------VYGDCDNYATLKGHSGAVMEL 379
           L+ H   V C KF P+G  + SA  D+ + LW+      ++  C+       H G V  +
Sbjct: 141 LTQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECIHSYCE-------HGGFVTYV 193

Query: 380 HYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGT 559
            ++  G+ + +A  D TV VWD+ T   ++  + H++ VN+      G  L+ T S D T
Sbjct: 194 DFHPSGTCIAAAGMDNTVKVWDARTHRLLQHYQLHSAAVNALSFHPSGNYLI-TASSDST 252

Query: 560 VKLWDIRKKAAIQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKVW 694
           +K+ D+ +   + T   +      V F+ T +   SGG D  + VW
Sbjct: 253 LKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVW 298


>ref|NP_082016.1| WD repeat domain 51B [Mus musculus]
          Length = 476

 Score =  121 bits (303), Expect = 2e-27
 Identities = 81/302 (26%), Positives = 142/302 (47%), Gaps = 3/302 (0%)
 Frame = +2

Query: 191  SSLQAPIMLLS--GHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSG 364
            S L+ PI+  S  GH+  +    F PN   +A+A +D  ++LW++      Y  + GH  
Sbjct: 3    SGLEDPILERSFKGHKAAITSADFSPNCKQIATASWDTFLMLWSLKPHARAYRYV-GHKD 61

Query: 365  AVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTG 544
             V  L ++  G++L SAS D+TV +W  +   +    K HT+ V S   +  G QL+ T 
Sbjct: 62   VVTSLQFSPQGNLLASASRDRTVRLWVLDRKGKSSEFKAHTAPVRSVDFSADG-QLLVTA 120

Query: 545  SDDGTVKLWDI-RKKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTY 721
            S+D ++K+W + R++     +++T+ V    F+     I+S   D  IK+WD    +   
Sbjct: 121  SEDKSIKVWSMFRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVN 180

Query: 722  TMRGHADSVTXXXXXXXXXXXXXNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLL 901
                                      D+ V++WD+R      + ++ +Q  VH+   N L
Sbjct: 181  NFSDSVGFANFVDFNPNGTCIASAGSDHAVKIWDIR----MNKLLQHYQ--VHSCGVNCL 234

Query: 902  RCSWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEPIILSASSDK 1081
              S+ P G+ +   S+D  V + D    R++Y L GH G +  V+F  D  ++ S  +D 
Sbjct: 235  --SFHPLGNSLVTASSDGTVKMLDLIEGRLIYTLQGHTGPVFTVSFSKDGELLTSGGADA 292

Query: 1082 RL 1087
            ++
Sbjct: 293  QV 294



 Score =  110 bits (276), Expect = 3e-24
 Identities = 74/252 (29%), Positives = 116/252 (46%), Gaps = 1/252 (0%)
 Frame = +2

Query: 224 GHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSM 403
           GH+  V   +F P G+ LASA  DR + LW V       +  K H+  V  + ++ DG +
Sbjct: 58  GHKDVVTSLQFSPQGNLLASASRDRTVRLW-VLDRKGKSSEFKAHTAPVRSVDFSADGQL 116

Query: 404 LFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRK 583
           L +AS DK++ VW       +  L  HT +V  C       +L+ + S+D T+K+WD   
Sbjct: 117 LVTASEDKSIKVWSMFRQRFLYSLYRHTHWVR-CAKFSPDGRLIVSCSEDKTIKIWDTTN 175

Query: 584 KAAIQTFQNTYQVLA-VTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTXXX 760
           K  +  F ++      V FN     I S G D+ +K+WD+R NKL    + H+  V    
Sbjct: 176 KQCVNNFSDSVGFANFVDFNPNGTCIASAGSDHAVKIWDIRMNKLLQHYQVHSCGVNCLS 235

Query: 761 XXXXXXXXXXNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAA 940
                      + D TV++ D+     + R +   QG+       +   S+S DG  + +
Sbjct: 236 FHPLGNSLVTASSDGTVKMLDLI----EGRLIYTLQGHTGP----VFTVSFSKDGELLTS 287

Query: 941 GSADRFVYVWDT 976
           G AD  V +W T
Sbjct: 288 GGADAQVLIWRT 299



 Score = 80.5 bits (197), Expect = 5e-15
 Identities = 61/255 (23%), Positives = 104/255 (40%), Gaps = 1/255 (0%)
 Frame = +2

Query: 344  TLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRG 523
            + KGH  A+    ++ +   + +AS D  + +W  +   R  R  GH   V S   + +G
Sbjct: 13   SFKGHKAAITSADFSPNCKQIATASWDTFLMLWSLKPHARAYRYVGHKDVVTSLQFSPQG 72

Query: 524  PQLVCTGSDDGTVKLWDIRKKAAIQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKVWDL 700
              L+ + S D TV+LW + +K     F+ +T  V +V F+     +++   D  IKVW +
Sbjct: 73   -NLLASASRDRTVRLWVLDRKGKSSEFKAHTAPVRSVDFSADGQLLVTASEDKSIKVWSM 131

Query: 701  RQNKLTYTMRGHADSVTXXXXXXXXXXXXXNAMDNTVRVWDVRPFAPKERCVKIFQGNVH 880
             + +  Y++  H   V                                 RC K       
Sbjct: 132  FRQRFLYSLYRHTHWV---------------------------------RCAK------- 151

Query: 881  NFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEPII 1060
                      +SPDG  I + S D+ + +WDTT+++ +       G  N V F+P+   I
Sbjct: 152  ----------FSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPNGTCI 201

Query: 1061 LSASSDKRLYTGEIQ 1105
             SA SD  +   +I+
Sbjct: 202  ASAGSDHAVKIWDIR 216


>ref|NP_084122.2| APG16L beta isoform [Mus musculus]
          Length = 607

 Score =  120 bits (301), Expect = 4e-27
 Identities = 85/295 (28%), Positives = 135/295 (45%), Gaps = 5/295 (1%)
 Frame = +2

Query: 215  LLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGD-CDNYATLKGHSGAVMELHYNT 391
            +   H+GEV   +F P    LA+ G DR + LW  +GD C+   +L G +  +  + +++
Sbjct: 317  VFDAHDGEVNAVQFSPGSRLLATGGMDRRVKLWEAFGDKCEFKGSLSGSNAGITSIEFDS 376

Query: 392  DGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLW 571
             G+ L +AS D    +W  +       L GH+  V S        ++V +GS D T+KLW
Sbjct: 377  AGAYLLAASNDFASRIWTVDDYRLRHTLTGHSGKVLSAKFLLDNARIV-SGSHDRTLKLW 435

Query: 572  DIRKKAAIQTFQNTYQVLAVTFND---TSDQIISGGIDNDIKVWDLRQNKLTYTMRGHAD 742
            D+R K  I+T          + ND   T   ++SG  D  I+ WD+R   +   M     
Sbjct: 436  DLRSKVCIKTV-----FAGSSCNDIVCTEQCVMSGHFDKKIRFWDIRSESVVREME-LLG 489

Query: 743  SVTXXXXXXXXXXXXXNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPD 922
             +T              + D+ ++V D+R  A K+     F         +  R  +SPD
Sbjct: 490  KITALDLNPERTELLSCSRDDLLKVIDLRTNAVKQ----TFSAPGFKCGSDWTRVVFSPD 545

Query: 923  GSKIAAGSADRFVYVWDTTSRRILYKL-PGHAGSINEVAFHPDEPIILSASSDKR 1084
            GS +AAGSA+  +YVW   + ++   L   H+ SIN VA+ P    ++S     R
Sbjct: 546  GSYVAAGSAEGSLYVWSVLTGKVEKVLSKQHSSSINAVAWAPSGLHVVSVDKGSR 600


>ref|NP_083963.1| hypothetical protein LOC76646 [Mus musculus]
          Length = 303

 Score =  119 bits (298), Expect = 9e-27
 Identities = 71/239 (29%), Positives = 118/239 (49%), Gaps = 1/239 (0%)
 Frame = +2

Query: 356  HSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLV 535
            H G V    ++ DG  L +AS D  V VW +++G  + RL GH   V SC  +  G +L+
Sbjct: 25   HHGEVNCSAFSPDGRTLLTASDDGCVYVWGTKSGRLLWRLAGHRGPVKSCCFSPDG-RLI 83

Query: 536  CTGSDDGTVKLWDIRKKAAIQTFQNTYQ-VLAVTFNDTSDQIISGGIDNDIKVWDLRQNK 712
             + S D +++LWD+ +   +   +   + V  V+F+  S Q+ SGG D    VW+++  +
Sbjct: 84   ASSSSDHSIRLWDVARSKCLHVLKGHQRSVETVSFSPDSKQLASGGWDKRAIVWEVQSGR 143

Query: 713  LTYTMRGHADSVTXXXXXXXXXXXXXNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEK 892
              + + GH DS+               + D+TV +WD+R   P      +   N+     
Sbjct: 144  RVHLLVGHCDSIQSSDFSPTSDSLATGSWDSTVHIWDLRASTP-----VVSYHNLEGHTG 198

Query: 893  NLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEPIILSA 1069
            N+    +S  G  +A+GS D+ + VW  T+  +  +L GH   +N +AF PDE  + SA
Sbjct: 199  NISCLCYSASG-LLASGSWDKTICVWKPTTNNLPLQLKGHTIWVNSLAFSPDELKLASA 256



 Score =  104 bits (259), Expect = 3e-22
 Identities = 73/249 (29%), Positives = 111/249 (44%), Gaps = 5/249 (2%)
 Frame = +2

Query: 218 LSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVY-GDCDNYATLKGHSGAVMELHYNTD 394
           L+GH G V  C F P+G  +AS+  D  I LW+V    C +   LKGH  +V  + ++ D
Sbjct: 64  LAGHRGPVKSCCFSPDGRLIASSSSDHSIRLWDVARSKCLH--VLKGHQRSVETVSFSPD 121

Query: 395 GSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWD 574
              L S   DK   VW+ ++G RV  L GH   + S   +     L  TGS D TV +WD
Sbjct: 122 SKQLASGGWDKRAIVWEVQSGRRVHLLVGHCDSIQSSDFSPTSDSL-ATGSWDSTVHIWD 180

Query: 575 IRKKAAIQTFQN----TYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHAD 742
           +R    + ++ N    T  +  + ++  S  + SG  D  I VW    N L   ++GH  
Sbjct: 181 LRASTPVVSYHNLEGHTGNISCLCYS-ASGLLASGSWDKTICVWKPTTNNLPLQLKGHTI 239

Query: 743 SVTXXXXXXXXXXXXXNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPD 922
            V                   TV+VWD        +C++  +G +         C ++PD
Sbjct: 240 WVNSLAFSPDELKLASAGYSRTVKVWD----CLTGKCLETLKGMLDVAH----ACIFTPD 291

Query: 923 GSKIAAGSA 949
           G  + +G+A
Sbjct: 292 GKLLVSGAA 300



 Score = 68.2 bits (165), Expect = 2e-11
 Identities = 38/167 (22%), Positives = 77/167 (46%)
 Frame = +2

Query: 605  QNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTXXXXXXXXXXX 784
            Q+  +V    F+     +++   D  + VW  +  +L + + GH   V            
Sbjct: 24   QHHGEVNCSAFSPDGRTLLTASDDGCVYVWGTKSGRLLWRLAGHRGPVKSCCFSPDGRLI 83

Query: 785  XXNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVY 964
              ++ D+++R+WDV     + +C+ + +G+  + E      S+SPD  ++A+G  D+   
Sbjct: 84   ASSSSDHSIRLWDVA----RSKCLHVLKGHQRSVET----VSFSPDSKQLASGGWDKRAI 135

Query: 965  VWDTTSRRILYKLPGHAGSINEVAFHPDEPIILSASSDKRLYTGEIQ 1105
            VW+  S R ++ L GH  SI    F P    + + S D  ++  +++
Sbjct: 136  VWEVQSGRRVHLLVGHCDSIQSSDFSPTSDSLATGSWDSTVHIWDLR 182


>ref|NP_083081.2| katanin p80 (WD40-containing) subunit B 1 [Mus musculus]
          Length = 658

 Score =  118 bits (295), Expect = 2e-26
 Identities = 64/216 (29%), Positives = 112/216 (51%), Gaps = 2/216 (0%)
 Frame = +2

Query: 446  SETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQ-NTYQV 622
            ++T  +++ +  H S V+S    +   +L+ TG DD  V LW I K   I +   +T  V
Sbjct: 7    TKTAWKLQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPV 66

Query: 623  LAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTXXXXXXXXXXXXXNAMD 802
             +V  N   + I++G     I+VWDL   K+  T+ GH  ++               + D
Sbjct: 67   ESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQD 126

Query: 803  NTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRC-SWSPDGSKIAAGSADRFVYVWDTT 979
              +++WD+R    ++ CV  ++G+        +RC  +SPDG  +A+ + D  V +WD T
Sbjct: 127  TNIKLWDIR----RKGCVFRYRGH-----SQAVRCLRFSPDGKWLASAADDHTVKLWDLT 177

Query: 980  SRRILYKLPGHAGSINEVAFHPDEPIILSASSDKRL 1087
            + +++ + PGH G +N V FHP+E ++ S SSD+ +
Sbjct: 178  AGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTI 213



 Score = 93.6 bits (231), Expect = 5e-19
 Identities = 64/239 (26%), Positives = 108/239 (45%), Gaps = 2/239 (0%)
 Frame = +2

Query: 263 NGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVW 442
           +G  LA+ G D  + LW++    +   +L GH+  V  +  NT   ++ + S   ++ VW
Sbjct: 32  SGRLLATGGDDCRVNLWSI-NKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVW 90

Query: 443 DSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQNTYQ- 619
           D E  + ++ L GH + + S      G + V +GS D  +KLWDIR+K  +  ++   Q 
Sbjct: 91  DLEAAKILRTLMGHKANICSLDFHPYG-EFVASGSQDTNIKLWDIRRKGCVFRYRGHSQA 149

Query: 620 VLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTXXXXXXXXXXXXXNAM 799
           V  + F+     + S   D+ +K+WDL   K+     GH   V               + 
Sbjct: 150 VRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSS 209

Query: 800 DNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRF-VYVWD 973
           D T+R WD+  F     C++   G V +         ++PDG  + +G  D   VY W+
Sbjct: 210 DRTIRFWDLEKFQVVS-CIEGEPGPVRS-------VLFNPDGCCLYSGCQDSLRVYGWE 260



 Score = 92.8 bits (229), Expect = 9e-19
 Identities = 61/237 (25%), Positives = 110/237 (46%), Gaps = 2/237 (0%)
 Frame = +2

Query: 395  GSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWD 574
            G +L +   D  V +W       +  L GHTS V S        +L+  GS  G++++WD
Sbjct: 33   GRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVR-LNTPEELIVAGSQSGSIRVWD 91

Query: 575  IRKKAAIQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVT 751
            +     ++T   +   + ++ F+   + + SG  D +IK+WD+R+    +  RGH+ +V 
Sbjct: 92   LEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVR 151

Query: 752  XXXXXXXXXXXXXNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSK 931
                          A D+TV++WD+       + +  F G  H    N++   + P+   
Sbjct: 152  CLRFSPDGKWLASAADDHTVKLWDLTA----GKMMSEFPG--HTGPVNVVE--FHPNEYL 203

Query: 932  IAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEPIILSASSDK-RLYTGE 1099
            +A+GS+DR +  WD    +++  + G  G +  V F+PD   + S   D  R+Y  E
Sbjct: 204  LASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFNPDGCCLYSGCQDSLRVYGWE 260



 Score = 78.2 bits (191), Expect = 2e-14
 Identities = 52/157 (33%), Positives = 74/157 (47%), Gaps = 3/157 (1%)
 Frame = +2

Query: 218 LSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVY--GDCDNYATLKGHSGAVMELHYNT 391
           L GH+  +    FHP G  +AS   D  I LW++   G    Y   +GHS AV  L ++ 
Sbjct: 101 LMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRY---RGHSQAVRCLRFSP 157

Query: 392 DGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLW 571
           DG  L SA+ D TV +WD   G+ +    GHT  VN          L+ +GS D T++ W
Sbjct: 158 DGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVN-VVEFHPNEYLLASGSSDRTIRFW 216

Query: 572 DIRKKAAIQTFQ-NTYQVLAVTFNDTSDQIISGGIDN 679
           D+ K   +   +     V +V FN     + SG  D+
Sbjct: 217 DLEKFQVVSCIEGEPGPVRSVLFNPDGCCLYSGCQDS 253


>ref|NP_038653.1| platelet-activating factor acetylhydrolase, isoform 1b, beta1 subunit
            [Mus musculus]
          Length = 410

 Score =  109 bits (273), Expect = 7e-24
 Identities = 81/274 (29%), Positives = 124/274 (45%), Gaps = 22/274 (8%)
 Frame = +2

Query: 332  DNYATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYP 511
            + YA L GH   V  + ++   S++ SAS D T+ VWD ETG+  + LKGHT  V     
Sbjct: 100  EKYA-LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISF 158

Query: 512  ARRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIK 688
               G +L+ + S D T+KLWD +    I+T   + + V +V      D I+S   D  IK
Sbjct: 159  DHSG-KLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIK 217

Query: 689  VWDLRQNKLTYTMRGHADSVTXXXXXXXXXXXXXNAMDNTVRVWDVRPFAPKERCVKIFQ 868
            +W+++      T  GH + V               + D TVRVW V   A KE   ++ +
Sbjct: 218  MWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVV---ATKECKAELRE 274

Query: 869  GNVHNFEKNLLRC-SWSPDGSK--------------------IAAGSADRFVYVWDTTSR 985
                   ++++ C SW+P+ S                     + +GS D+ + +WD ++ 
Sbjct: 275  ------HEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTG 328

Query: 986  RILYKLPGHAGSINEVAFHPDEPIILSASSDKRL 1087
              L  L GH   +  V FH     ILS + DK L
Sbjct: 329  MCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTL 362



 Score =  103 bits (257), Expect = 5e-22
 Identities = 79/315 (25%), Positives = 136/315 (43%), Gaps = 21/315 (6%)
 Frame = +2

Query: 218  LSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDG 397
            LSGH   V    FHP  S + SA  D  I +W+ Y   D   TLKGH+ +V ++ ++  G
Sbjct: 104  LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWD-YETGDFERTLKGHTDSVQDISFDHSG 162

Query: 398  SMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDI 577
             +L S S D T+ +WD +  E ++ + GH   V+S      G  +V + S D T+K+W++
Sbjct: 163  KLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIV-SASRDKTIKMWEV 221

Query: 578  RKKAAIQTFQNTYQ-VLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTX 754
            +    ++TF    + V  V  N     I S   D  ++VW +   +    +R H   V  
Sbjct: 222  QTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVEC 281

Query: 755  XXXXXXXXXXXXN--------------------AMDNTVRVWDVRPFAPKERCVKIFQGN 874
                        +                    + D T+++WDV        C+    G+
Sbjct: 282  ISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVST----GMCLMTLVGH 337

Query: 875  VHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEP 1054
              N+ + +L   +   G  I + + D+ + VWD  ++R +  L  H   +  + FH   P
Sbjct: 338  -DNWVRGVL---FHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAP 393

Query: 1055 IILSASSDKRLYTGE 1099
             +++ S D+ +   E
Sbjct: 394  YVVTGSVDQTVKVWE 408



 Score = 88.6 bits (218), Expect = 2e-17
 Identities = 66/229 (28%), Positives = 97/229 (42%), Gaps = 22/229 (9%)
 Frame = +2

Query: 209 IMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVY-GDCDNYATLKGHSGAVMELHY 385
           I  + GH+  V      PNG  + SA  D+ I +W V  G C    T  GH   V  +  
Sbjct: 185 IRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYC--VKTFTGHREWVRMVRP 242

Query: 386 NTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFV-------NSCYPA---------- 514
           N DG+++ S S D+TV VW   T E    L+ H   V        S Y +          
Sbjct: 243 NQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETK 302

Query: 515 ---RRGPQLVCTGSDDGTVKLWDIRKKAAIQTF-QNTYQVLAVTFNDTSDQIISGGIDND 682
              + GP L+ +GS D T+K+WD+     + T   +   V  V F+     I+S   D  
Sbjct: 303 KSGKPGPFLL-SGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKT 361

Query: 683 IKVWDLRQNKLTYTMRGHADSVTXXXXXXXXXXXXXNAMDNTVRVWDVR 829
           ++VWD +  +   T+  H   VT              ++D TV+VW+ R
Sbjct: 362 LRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410



 Score = 57.0 bits (136), Expect = 5e-08
 Identities = 48/188 (25%), Positives = 78/188 (41%), Gaps = 3/188 (1%)
 Frame = +2

Query: 578  RKKAAIQTFQNTYQVLAVTFNDTSDQIISGGI---DNDIKVWDLRQNKLTYTMRGHADSV 748
            +K  ++   Q     L    N+  ++  SGG      D K W  R  +  Y + GH   V
Sbjct: 53   KKWTSVIRLQKKVMELESKLNEAKEEFTSGGPLGQKRDPKEWIPRPPE-KYALSGHRSPV 111

Query: 749  TXXXXXXXXXXXXXNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGS 928
            T              + D T++VWD       ER +K    +V +        S+   G 
Sbjct: 112  TRVIFHPVFSVMVSASEDATIKVWDYET-GDFERTLKGHTDSVQDI-------SFDHSGK 163

Query: 929  KIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEPIILSASSDKRLYTGEIQ* 1108
             +A+ SAD  + +WD      +  + GH  +++ VA  P+   I+SAS DK +   E+Q 
Sbjct: 164  LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQT 223

Query: 1109 RYGMEDST 1132
             Y ++  T
Sbjct: 224  GYCVKTFT 231


>ref|NP_598727.1| TAF5-like RNA polymerase II, p300/CBP-associated factor
           (PCAF)-associated factor [Mus musculus]
          Length = 589

 Score =  103 bits (258), Expect = 4e-22
 Identities = 62/206 (30%), Positives = 99/206 (48%), Gaps = 1/206 (0%)
 Frame = +2

Query: 215 LLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTD 394
           +L GH G VY  +F  + S L S   D  I  W++ G   N    +GH+  V ++  +  
Sbjct: 337 ILRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDL-GSFTNTVLYQGHAYPVWDVDISPF 395

Query: 395 GSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWD 574
                S S D+T  +W  +    ++   GH + V+ C         + TGS D TV+LW 
Sbjct: 396 SLYFASGSHDRTARLWSFDRTYPLRIYAGHLADVD-CVKFHPNSNYLATGSTDKTVRLWS 454

Query: 575 IRKKAAIQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVT 751
            ++  +++ F  +   VL+++F+     + S G D  +K+WDL    L   +RGH DS+T
Sbjct: 455 AQQGNSVRLFTGHRGPVLSLSFSPNGKYLASAGEDQRLKLWDLASGTLFKELRGHTDSIT 514

Query: 752 XXXXXXXXXXXXXNAMDNTVRVWDVR 829
                         +MDN+VRVWD+R
Sbjct: 515 SLAFSPDSGLIASASMDNSVRVWDIR 540



 Score = 84.7 bits (208), Expect = 2e-16
 Identities = 43/126 (34%), Positives = 70/126 (55%), Gaps = 1/126 (0%)
 Frame = +2

Query: 206 PIMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHY 385
           P+ + +GH  +V C KFHPN + LA+   D+ + LW+     ++     GH G V+ L +
Sbjct: 418 PLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQ-QGNSVRLFTGHRGPVLSLSF 476

Query: 386 NTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNS-CYPARRGPQLVCTGSDDGTV 562
           + +G  L SA  D+ + +WD  +G   K L+GHT  + S  +    G  L+ + S D +V
Sbjct: 477 SPNGKYLASAGEDQRLKLWDLASGTLFKELRGHTDSITSLAFSPDSG--LIASASMDNSV 534

Query: 563 KLWDIR 580
           ++WDIR
Sbjct: 535 RVWDIR 540



 Score = 82.8 bits (203), Expect = 9e-16
 Identities = 78/285 (27%), Positives = 122/285 (42%), Gaps = 6/285 (2%)
 Frame = +2

Query: 269  STLASAGFDR-LILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWD 445
            S L +AGFD   I LW++         LK       E H+     +  +  T +     +
Sbjct: 280  SKLLAAGFDNSCIKLWSLRSK-----KLKS------EPHHVDTSRIRLACDTLEEEENEE 328

Query: 446  SETGERVKRLKGHTSFVNSC-YPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQ-NTYQ 619
              TG  +K L+GH   V S  + A     L C  S+D +++ WD+        +Q + Y 
Sbjct: 329  DNTGTEMKILRGHCGPVYSTRFLADSSGLLSC--SEDMSIRYWDLGSFTNTVLYQGHAYP 386

Query: 620  VLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMR---GHADSVTXXXXXXXXXXXXX 790
            V  V  +  S    SG  D   ++W   +   TY +R   GH   V              
Sbjct: 387  VWDVDISPFSLYFASGSHDRTARLWSFDR---TYPLRIYAGHLADVDCVKFHPNSNYLAT 443

Query: 791  NAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVW 970
             + D TVR+W     A +   V++F G+       +L  S+SP+G  +A+   D+ + +W
Sbjct: 444  GSTDKTVRLWS----AQQGNSVRLFTGH----RGPVLSLSFSPNGKYLASAGEDQRLKLW 495

Query: 971  DTTSRRILYKLPGHAGSINEVAFHPDEPIILSASSDKRLYTGEIQ 1105
            D  S  +  +L GH  SI  +AF PD  +I SAS D  +   +I+
Sbjct: 496  DLASGTLFKELRGHTDSITSLAFSPDSGLIASASMDNSVRVWDIR 540



 Score = 72.4 bits (176), Expect = 1e-12
 Identities = 47/165 (28%), Positives = 76/165 (46%), Gaps = 1/165 (0%)
 Frame = +2

Query: 212 MLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNT 391
           +L  GH   V+     P     AS   DR   LW+ +          GH   V  + ++ 
Sbjct: 378 VLYQGHAYPVWDVDISPFSLYFASGSHDRTARLWS-FDRTYPLRIYAGHLADVDCVKFHP 436

Query: 392 DGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLW 571
           + + L + STDKTV +W ++ G  V+   GH   V S   +  G  L   G +D  +KLW
Sbjct: 437 NSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLSFSPNGKYLASAG-EDQRLKLW 495

Query: 572 DIRKKAAIQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLR 703
           D+      +  + +T  + ++ F+  S  I S  +DN ++VWD+R
Sbjct: 496 DLASGTLFKELRGHTDSITSLAFSPDSGLIASASMDNSVRVWDIR 540


  Database: RefSeqMP
    Posted date:  Aug 2, 2006 12:58 AM
  Number of letters in database: 21,768,885
  Number of sequences in database:  45,328
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 69,567,362
Number of Sequences: 45328
Number of extensions: 1680182
Number of successful extensions: 7845
Number of sequences better than 1.0e-05: 10
Number of HSP's better than  0.0 without gapping: 4194
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6133
length of database: 21,768,885
effective HSP length: 108
effective length of database: 16,873,461
effective search space used: 6968739393
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)