Animal-Genome cDNA PBL01_0074_B12


Search to RefSeqBP

BLASTX 2.2.10 [Oct-19-2004]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= PBL01_0074_B12
         (2620 letters)

Database: RefSeqBP 
           33,508 sequences; 16,112,626 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|XP_883815.1| PREDICTED: similar to F-box protein FBW7 isofor...  1211   0.0  
Alignment   gi|XP_613742.2| PREDICTED: similar to F-box protein FBW7 isofor...  1211   0.0  
Alignment   gi|XP_883690.1| PREDICTED: similar to F-box protein FBW7 isofor...  1093   0.0  
Alignment   gi|XP_883785.1| PREDICTED: similar to F-box protein FBW7 isofor...  1092   0.0  
Alignment   gi|XP_883749.1| PREDICTED: similar to F-box protein FBW7 isofor...  1069   0.0  
Alignment   gi|XP_883656.1| PREDICTED: similar to F-box protein FBW7 isofor...   244   2e-64
Alignment   gi|XP_612428.2| PREDICTED: similar to F-box and WD-40 domain pr...   242   1e-63
Alignment   gi|XP_877080.1| PREDICTED: similar to F-box and WD-40 domain pr...   242   1e-63
Alignment   gi|XP_613703.2| PREDICTED: similar to F-box/WD-repeat protein 1...   236   5e-62
Alignment   gi|XP_608583.2| PREDICTED: similar to CG7568-PA [Bos taurus]         181   3e-45

>ref|XP_883815.1| PREDICTED: similar to F-box protein FBW7 isoform 1 isoform 6 [Bos
            taurus]
          Length = 706

 Score = 1211 bits (3132), Expect = 0.0
 Identities = 606/706 (85%), Positives = 607/706 (85%), Gaps = 1/706 (0%)
 Frame = +2

Query: 407  MNQELLSVGSKRRRTGGSLRGNPSSSQADXXXXXXXXXXXXXX-XXXXXXHTARNGEVVG 583
            MNQELLSVGSKRRRTGGSLRGNPSSSQAD                     H ARNGEVVG
Sbjct: 1    MNQELLSVGSKRRRTGGSLRGNPSSSQADEEQMNRVLEEEQQQPRHQEEEHAARNGEVVG 60

Query: 584  AEPRPGAQNASQQGQLEENNNRFISVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 763
            AEPRPG QN  QQGQLEENNNRFISV                                  
Sbjct: 61   AEPRPGDQNDPQQGQLEENNNRFISVDEDSSGNQEEQEEDEEHAGEQDEEDEEEEEMDQE 120

Query: 764  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLPIHQLSSPFYTKTTKMKRKLDHGSEVRSF 943
                                         DLPIHQ SSPFYTKTTKMKRKLDHGSEVRSF
Sbjct: 121  SDDFDQSDDSSREDEHTHRNSVTNSNSIVDLPIHQRSSPFYTKTTKMKRKLDHGSEVRSF 180

Query: 944  SLGKKPCKVSEYTSTTGLVPCSATPTTFGDLRAANXXXXXXXXITSVQPPTGLQEWLKMF 1123
            SLGKKPCKVSEYTSTTGLVPCSATPTTFGDLRAAN        ITSVQPPTGLQEWLKMF
Sbjct: 181  SLGKKPCKVSEYTSTTGLVPCSATPTTFGDLRAANGQGQQRRRITSVQPPTGLQEWLKMF 240

Query: 1124 QSWSGPEKLLALDELIDSCEPTQVKHMMQVIAPQFQRDFISLLPKELALYVLSFLEPKDL 1303
            QSWSGPEKLLALDELIDSCEPTQVKHMMQVI PQFQRDFISLLPKELALYVLSFLEPKDL
Sbjct: 241  QSWSGPEKLLALDELIDSCEPTQVKHMMQVIEPQFQRDFISLLPKELALYVLSFLEPKDL 300

Query: 1304 LQAAQTCRYWRILAEDNLLWREKCKEEGIDEPLHIKRRKVIKPGFIHSPWKSAYIRQHRI 1483
            LQAAQTCRYWRILAEDNLLWREKCKEEGIDEPLHIKRRKVIKPGFIHSPWKSAYIRQHRI
Sbjct: 301  LQAAQTCRYWRILAEDNLLWREKCKEEGIDEPLHIKRRKVIKPGFIHSPWKSAYIRQHRI 360

Query: 1484 DTNWRRGELKSPKVLKGHDDHVITCLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHT 1663
            DTNWRRGELKSPKVLKGHDDHVITCLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHT
Sbjct: 361  DTNWRRGELKSPKVLKGHDDHVITCLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHT 420

Query: 1664 GGVWSSQMRDNIIISGSTDRTLRVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDA 1843
            GGVWSSQMRDNIIISGSTDRTL+VWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDA
Sbjct: 421  GGVWSSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDA 480

Query: 1844 TLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHT 2023
            TLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHT
Sbjct: 481  TLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHT 540

Query: 2024 NRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNILVSGNADS 2203
            NRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNILVSGNADS
Sbjct: 541  NRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNILVSGNADS 600

Query: 2204 TVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLWDLKTGEFIRNLV 2383
            TVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLWDLKTGEFIRNLV
Sbjct: 601  TVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLWDLKTGEFIRNLV 660

Query: 2384 TLESGGSGGVVWRIRASNTKLVCAVGSRNGTEEAKLLVLDFDVDMK 2521
            TLESGGSGGVVWRIRASNTKLVCAVGSRNGTEE KLLVLDFDVDMK
Sbjct: 661  TLESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLDFDVDMK 706


>ref|XP_613742.2| PREDICTED: similar to F-box protein FBW7 isoform 1 isoform 1 [Bos
            taurus]
          Length = 706

 Score = 1211 bits (3132), Expect = 0.0
 Identities = 606/706 (85%), Positives = 607/706 (85%), Gaps = 1/706 (0%)
 Frame = +2

Query: 407  MNQELLSVGSKRRRTGGSLRGNPSSSQADXXXXXXXXXXXXXX-XXXXXXHTARNGEVVG 583
            MNQELLSVGSKRRRTGGSLRGNPSSSQAD                     H ARNGEVVG
Sbjct: 1    MNQELLSVGSKRRRTGGSLRGNPSSSQADEEQMNRVLEEEQQQPRHQEEEHAARNGEVVG 60

Query: 584  AEPRPGAQNASQQGQLEENNNRFISVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 763
            AEPRPG QN  QQGQLEENNNRFISV                                  
Sbjct: 61   AEPRPGDQNDPQQGQLEENNNRFISVDEDSSGNQEEQEEDEEHAGEQDEEDEEEEEMDQE 120

Query: 764  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLPIHQLSSPFYTKTTKMKRKLDHGSEVRSF 943
                                         DLPIHQ SSPFYTKTTKMKRKLDHGSEVRSF
Sbjct: 121  SDDFDQSDDSSREDEHTHRNSVTNSNSIVDLPIHQRSSPFYTKTTKMKRKLDHGSEVRSF 180

Query: 944  SLGKKPCKVSEYTSTTGLVPCSATPTTFGDLRAANXXXXXXXXITSVQPPTGLQEWLKMF 1123
            SLGKKPCKVSEYTSTTGLVPCSATPTTFGDLRAAN        ITSVQPPTGLQEWLKMF
Sbjct: 181  SLGKKPCKVSEYTSTTGLVPCSATPTTFGDLRAANGQGQQRRRITSVQPPTGLQEWLKMF 240

Query: 1124 QSWSGPEKLLALDELIDSCEPTQVKHMMQVIAPQFQRDFISLLPKELALYVLSFLEPKDL 1303
            QSWSGPEKLLALDELIDSCEPTQVKHMMQVI PQFQRDFISLLPKELALYVLSFLEPKDL
Sbjct: 241  QSWSGPEKLLALDELIDSCEPTQVKHMMQVIEPQFQRDFISLLPKELALYVLSFLEPKDL 300

Query: 1304 LQAAQTCRYWRILAEDNLLWREKCKEEGIDEPLHIKRRKVIKPGFIHSPWKSAYIRQHRI 1483
            LQAAQTCRYWRILAEDNLLWREKCKEEGIDEPLHIKRRKVIKPGFIHSPWKSAYIRQHRI
Sbjct: 301  LQAAQTCRYWRILAEDNLLWREKCKEEGIDEPLHIKRRKVIKPGFIHSPWKSAYIRQHRI 360

Query: 1484 DTNWRRGELKSPKVLKGHDDHVITCLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHT 1663
            DTNWRRGELKSPKVLKGHDDHVITCLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHT
Sbjct: 361  DTNWRRGELKSPKVLKGHDDHVITCLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHT 420

Query: 1664 GGVWSSQMRDNIIISGSTDRTLRVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDA 1843
            GGVWSSQMRDNIIISGSTDRTL+VWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDA
Sbjct: 421  GGVWSSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDA 480

Query: 1844 TLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHT 2023
            TLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHT
Sbjct: 481  TLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHT 540

Query: 2024 NRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNILVSGNADS 2203
            NRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNILVSGNADS
Sbjct: 541  NRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNILVSGNADS 600

Query: 2204 TVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLWDLKTGEFIRNLV 2383
            TVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLWDLKTGEFIRNLV
Sbjct: 601  TVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLWDLKTGEFIRNLV 660

Query: 2384 TLESGGSGGVVWRIRASNTKLVCAVGSRNGTEEAKLLVLDFDVDMK 2521
            TLESGGSGGVVWRIRASNTKLVCAVGSRNGTEE KLLVLDFDVDMK
Sbjct: 661  TLESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLDFDVDMK 706


>ref|XP_883690.1| PREDICTED: similar to F-box protein FBW7 isoform 2 isoform 3 [Bos
            taurus]
          Length = 627

 Score = 1093 bits (2828), Expect = 0.0
 Identities = 530/541 (97%), Positives = 531/541 (98%)
 Frame = +2

Query: 899  KMKRKLDHGSEVRSFSLGKKPCKVSEYTSTTGLVPCSATPTTFGDLRAANXXXXXXXXIT 1078
            KMKRKLDHGSEVRSFSLGKKPCKVSEYTSTTGLVPCSATPTTFGDLRAAN        IT
Sbjct: 87   KMKRKLDHGSEVRSFSLGKKPCKVSEYTSTTGLVPCSATPTTFGDLRAANGQGQQRRRIT 146

Query: 1079 SVQPPTGLQEWLKMFQSWSGPEKLLALDELIDSCEPTQVKHMMQVIAPQFQRDFISLLPK 1258
            SVQPPTGLQEWLKMFQSWSGPEKLLALDELIDSCEPTQVKHMMQVI PQFQRDFISLLPK
Sbjct: 147  SVQPPTGLQEWLKMFQSWSGPEKLLALDELIDSCEPTQVKHMMQVIEPQFQRDFISLLPK 206

Query: 1259 ELALYVLSFLEPKDLLQAAQTCRYWRILAEDNLLWREKCKEEGIDEPLHIKRRKVIKPGF 1438
            ELALYVLSFLEPKDLLQAAQTCRYWRILAEDNLLWREKCKEEGIDEPLHIKRRKVIKPGF
Sbjct: 207  ELALYVLSFLEPKDLLQAAQTCRYWRILAEDNLLWREKCKEEGIDEPLHIKRRKVIKPGF 266

Query: 1439 IHSPWKSAYIRQHRIDTNWRRGELKSPKVLKGHDDHVITCLQFCGNRIVSGSDDNTLKVW 1618
            IHSPWKSAYIRQHRIDTNWRRGELKSPKVLKGHDDHVITCLQFCGNRIVSGSDDNTLKVW
Sbjct: 267  IHSPWKSAYIRQHRIDTNWRRGELKSPKVLKGHDDHVITCLQFCGNRIVSGSDDNTLKVW 326

Query: 1619 SAVTGKCLRTLVGHTGGVWSSQMRDNIIISGSTDRTLRVWNAETGECIHTLYGHTSTVRC 1798
            SAVTGKCLRTLVGHTGGVWSSQMRDNIIISGSTDRTL+VWNAETGECIHTLYGHTSTVRC
Sbjct: 327  SAVTGKCLRTLVGHTGGVWSSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRC 386

Query: 1799 MHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVW 1978
            MHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVW
Sbjct: 387  MHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVW 446

Query: 1979 DPETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSG 2158
            DPETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSG
Sbjct: 447  DPETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSG 506

Query: 2159 MELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTV 2338
            MELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTV
Sbjct: 507  MELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTV 566

Query: 2339 KLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEEAKLLVLDFDVDM 2518
            KLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEE KLLVLDFDVDM
Sbjct: 567  KLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLDFDVDM 626

Query: 2519 K 2521
            K
Sbjct: 627  K 627


>ref|XP_883785.1| PREDICTED: similar to F-box protein FBW7 isoform 3 isoform 5 [Bos
            taurus]
          Length = 589

 Score = 1092 bits (2825), Expect = 0.0
 Identities = 529/541 (97%), Positives = 531/541 (98%)
 Frame = +2

Query: 899  KMKRKLDHGSEVRSFSLGKKPCKVSEYTSTTGLVPCSATPTTFGDLRAANXXXXXXXXIT 1078
            +MKRKLDHGSEVRSFSLGKKPCKVSEYTSTTGLVPCSATPTTFGDLRAAN        IT
Sbjct: 49   RMKRKLDHGSEVRSFSLGKKPCKVSEYTSTTGLVPCSATPTTFGDLRAANGQGQQRRRIT 108

Query: 1079 SVQPPTGLQEWLKMFQSWSGPEKLLALDELIDSCEPTQVKHMMQVIAPQFQRDFISLLPK 1258
            SVQPPTGLQEWLKMFQSWSGPEKLLALDELIDSCEPTQVKHMMQVI PQFQRDFISLLPK
Sbjct: 109  SVQPPTGLQEWLKMFQSWSGPEKLLALDELIDSCEPTQVKHMMQVIEPQFQRDFISLLPK 168

Query: 1259 ELALYVLSFLEPKDLLQAAQTCRYWRILAEDNLLWREKCKEEGIDEPLHIKRRKVIKPGF 1438
            ELALYVLSFLEPKDLLQAAQTCRYWRILAEDNLLWREKCKEEGIDEPLHIKRRKVIKPGF
Sbjct: 169  ELALYVLSFLEPKDLLQAAQTCRYWRILAEDNLLWREKCKEEGIDEPLHIKRRKVIKPGF 228

Query: 1439 IHSPWKSAYIRQHRIDTNWRRGELKSPKVLKGHDDHVITCLQFCGNRIVSGSDDNTLKVW 1618
            IHSPWKSAYIRQHRIDTNWRRGELKSPKVLKGHDDHVITCLQFCGNRIVSGSDDNTLKVW
Sbjct: 229  IHSPWKSAYIRQHRIDTNWRRGELKSPKVLKGHDDHVITCLQFCGNRIVSGSDDNTLKVW 288

Query: 1619 SAVTGKCLRTLVGHTGGVWSSQMRDNIIISGSTDRTLRVWNAETGECIHTLYGHTSTVRC 1798
            SAVTGKCLRTLVGHTGGVWSSQMRDNIIISGSTDRTL+VWNAETGECIHTLYGHTSTVRC
Sbjct: 289  SAVTGKCLRTLVGHTGGVWSSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRC 348

Query: 1799 MHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVW 1978
            MHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVW
Sbjct: 349  MHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVW 408

Query: 1979 DPETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSG 2158
            DPETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSG
Sbjct: 409  DPETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSG 468

Query: 2159 MELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTV 2338
            MELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTV
Sbjct: 469  MELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTV 528

Query: 2339 KLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEEAKLLVLDFDVDM 2518
            KLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEE KLLVLDFDVDM
Sbjct: 529  KLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLDFDVDM 588

Query: 2519 K 2521
            K
Sbjct: 589  K 589


>ref|XP_883749.1| PREDICTED: similar to F-box protein FBW7 isoform 2 isoform 4 [Bos
            taurus]
          Length = 629

 Score = 1069 bits (2765), Expect = 0.0
 Identities = 523/543 (96%), Positives = 525/543 (96%), Gaps = 2/543 (0%)
 Frame = +2

Query: 899  KMKRKLDHGSEVRSFSLGKKPCKVSEYTSTTGLVPCSATPTTFGDLRAANXXXXXXXXIT 1078
            KMKRKLDHGSEVRSFSLGKKPCKVSEYTSTTGLVPCSATPTTFGDLRAAN        IT
Sbjct: 87   KMKRKLDHGSEVRSFSLGKKPCKVSEYTSTTGLVPCSATPTTFGDLRAANGQGQQRRRIT 146

Query: 1079 SVQPPTGLQEWLKMFQSWSGPEKLLALDELIDSCEPTQVKHMMQVIAPQFQRDFISLLPK 1258
            SVQPPTGLQEWLKMFQSWSGPEKLLALDELIDSCEPTQVKHMMQVI PQFQRDFISLLPK
Sbjct: 147  SVQPPTGLQEWLKMFQSWSGPEKLLALDELIDSCEPTQVKHMMQVIEPQFQRDFISLLPK 206

Query: 1259 ELALYVLSFLEPKDLLQAAQTCRYWRILAEDNLLWREKCKEEGIDEPLHIK--RRKVIKP 1432
            ELALYVLSFLEPKDLLQAAQTCRYWRILAEDNLLWREKCKEEG  +    K  RRKVIKP
Sbjct: 207  ELALYVLSFLEPKDLLQAAQTCRYWRILAEDNLLWREKCKEEGKVQNHREKMFRRKVIKP 266

Query: 1433 GFIHSPWKSAYIRQHRIDTNWRRGELKSPKVLKGHDDHVITCLQFCGNRIVSGSDDNTLK 1612
            GFIHSPWKSAYIRQHRIDTNWRRGELKSPKVLKGHDDHVITCLQFCGNRIVSGSDDNTLK
Sbjct: 267  GFIHSPWKSAYIRQHRIDTNWRRGELKSPKVLKGHDDHVITCLQFCGNRIVSGSDDNTLK 326

Query: 1613 VWSAVTGKCLRTLVGHTGGVWSSQMRDNIIISGSTDRTLRVWNAETGECIHTLYGHTSTV 1792
            VWSAVTGKCLRTLVGHTGGVWSSQMRDNIIISGSTDRTL+VWNAETGECIHTLYGHTSTV
Sbjct: 327  VWSAVTGKCLRTLVGHTGGVWSSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTV 386

Query: 1793 RCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVK 1972
            RCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVK
Sbjct: 387  RCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVK 446

Query: 1973 VWDPETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLT 2152
            VWDPETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLT
Sbjct: 447  VWDPETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLT 506

Query: 2153 SGMELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDG 2332
            SGMELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDG
Sbjct: 507  SGMELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDG 566

Query: 2333 TVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEEAKLLVLDFDV 2512
            TVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEE KLLVLDFDV
Sbjct: 567  TVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLDFDV 626

Query: 2513 DMK 2521
            DMK
Sbjct: 627  DMK 629


>ref|XP_883656.1| PREDICTED: similar to F-box protein FBW7 isoform 2 isoform 2 [Bos
            taurus]
          Length = 121

 Score =  244 bits (623), Expect = 2e-64
 Identities = 120/121 (99%), Positives = 120/121 (99%)
 Frame = +2

Query: 2159 MELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTV 2338
            MELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTV
Sbjct: 1    MELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTV 60

Query: 2339 KLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEEAKLLVLDFDVDM 2518
            KLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEE KLLVLDFDVDM
Sbjct: 61   KLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLDFDVDM 120

Query: 2519 K 2521
            K
Sbjct: 121  K 121



 Score = 71.6 bits (174), Expect = 3e-12
 Identities = 27/74 (36%), Positives = 53/74 (71%), Gaps = 3/74 (4%)
 Frame = +2

Query: 1682 QMRDNIIISGSTDRTLRVWNAETGECIHTLYG---HTSTVRCMHLHEKRVVSGSRDATLR 1852
            +++DNI++SG+ D T+++W+ +TG+C+ TL G   H S V C+  ++  V++ S D T++
Sbjct: 2    ELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVK 61

Query: 1853 VWDIETGQCLHVLM 1894
            +WD++TG+ +  L+
Sbjct: 62   LWDLKTGEFIRNLV 75



 Score = 63.9 bits (154), Expect = 6e-10
 Identities = 30/74 (40%), Positives = 48/74 (64%), Gaps = 3/74 (4%)
 Frame = +2

Query: 1799 MHLHEKRVVSGSRDATLRVWDIETGQCLHVLMG---HVAAVRCVQYDGRRVVSGAYDFMV 1969
            M L +  +VSG+ D+T+++WDI+TGQCL  L G   H +AV C+Q++   V++ + D  V
Sbjct: 1    MELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTV 60

Query: 1970 KVWDPETETCLHTL 2011
            K+WD +T   +  L
Sbjct: 61   KLWDLKTGEFIRNL 74



 Score = 60.8 bits (146), Expect = 5e-09
 Identities = 29/69 (42%), Positives = 43/69 (62%), Gaps = 3/69 (4%)
 Frame = +2

Query: 1574 NRIVSGSDDNTLKVWSAVTGKCLRTLVG---HTGGVWSSQMRDNIIISGSTDRTLRVWNA 1744
            N +VSG+ D+T+K+W   TG+CL+TL G   H   V   Q   N +I+ S D T+++W+ 
Sbjct: 6    NILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLWDL 65

Query: 1745 ETGECIHTL 1771
            +TGE I  L
Sbjct: 66   KTGEFIRNL 74



 Score = 58.5 bits (140), Expect = 3e-08
 Identities = 32/76 (42%), Positives = 46/76 (60%), Gaps = 3/76 (3%)
 Frame = +2

Query: 1940 VVSGAYDFMVKVWDPETETCLHTLQG---HTNRVYSLQFDGIHVVSGSLDTSIRVWDVET 2110
            +VSG  D  VK+WD +T  CL TLQG   H + V  LQF+   V++ S D ++++WD++T
Sbjct: 8    LVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLWDLKT 67

Query: 2111 GNCIHTLTGHQSLTSG 2158
            G  I  L   +S  SG
Sbjct: 68   GEFIRNLVTLESGGSG 83


>ref|XP_612428.2| PREDICTED: similar to F-box and WD-40 domain protein 11 isoform 1
            [Bos taurus]
          Length = 563

 Score =  242 bits (617), Expect = 1e-63
 Identities = 140/445 (31%), Positives = 229/445 (51%), Gaps = 32/445 (7%)
 Frame = +2

Query: 1112 LKMFQSWSGPEKLLALDELIDSCEPTQVKHMMQVIAPQFQRDFISLLPKE----LALYVL 1279
            +K F  WS  +++  ++ LI      Q  H+   + P  QRDFI+ LP++    +A  +L
Sbjct: 98   IKYFDQWSESDQVEFVEHLISRMCHYQHGHINSYLKPMLQRDFITALPEQGLDHIAENIL 157

Query: 1280 SFLEPKDLLQAAQTCRYWRILAEDNLLWREKCKEEGIDEPLH-------------IKRRK 1420
            S+L+ + L  A   C+ W+ +  + +LW++  +     +PL               K R 
Sbjct: 158  SYLDARSLCAAELVCKEWQRVISEGMLWKKLIERMVRTDPLWKGLSERRGWDQYLFKNRP 217

Query: 1421 VIKP--GFIHSPWKSAYIRQHRIDTNWRRGELKSPKV-LKGHDDHVITCLQFCGNRIVSG 1591
               P   F  S +         I++NWR G     ++  +  +   + CLQ+   +I+SG
Sbjct: 218  TDGPPNSFYRSLYPKIIQDIETIESNWRCGRHNLQRIQCRSENSKGVYCLQYDDEKIISG 277

Query: 1592 SDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDNIIISGSTDRTLRVWNAETGECIHTL 1771
              DN++K+W   + +CL+ L GHTG V   Q  + +I++GS+D T+RVW+  TGE ++TL
Sbjct: 278  LRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYDERVIVTGSSDSTVRVWDVNTGEVLNTL 337

Query: 1772 YGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCL---HVLMGHVAAVRCVQYDGRRV 1942
              H   V  +      +V+ S+D ++ VWD+ +   +    VL+GH AAV  V +D + +
Sbjct: 338  IHHNEAVLHLRFSNGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDFDDKYI 397

Query: 1943 VSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCI 2122
            VS + D  +KVW   T   + TL GH   +  LQ+    VVSGS D +IR+WD+E G C+
Sbjct: 398  VSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACL 457

Query: 2123 HTLTGHQSLTSGMELKDNILVSGNADSTVKIWDIKTG---------QCLQTLQGPNKHQS 2275
              L GH+ L   +   +  +VSG  D  +K+WD++            CL+TL    +H  
Sbjct: 458  RVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLV---EHSG 514

Query: 2276 AVTCLQFNKNFVITSSDDGTVKLWD 2350
             V  LQF++  +I+SS D T+ +WD
Sbjct: 515  RVFRLQFDEFQIISSSHDDTILIWD 539



 Score = 68.2 bits (165), Expect = 3e-11
 Identities = 28/75 (37%), Positives = 49/75 (65%)
 Frame = +2

Query: 2159 MELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTV 2338
            ++  D  ++SG  D+++KIWD  + +CL+ L G   H  +V CLQ+++  ++T S D TV
Sbjct: 267  LQYDDEKIISGLRDNSIKIWDKTSLECLKVLTG---HTGSVLCLQYDERVIVTGSSDSTV 323

Query: 2339 KLWDLKTGEFIRNLV 2383
            ++WD+ TGE +  L+
Sbjct: 324  RVWDVNTGEVLNTLI 338


>ref|XP_877080.1| PREDICTED: similar to F-box and WD-40 domain protein 11 isoform 2
            [Bos taurus]
          Length = 522

 Score =  242 bits (617), Expect = 1e-63
 Identities = 140/445 (31%), Positives = 229/445 (51%), Gaps = 32/445 (7%)
 Frame = +2

Query: 1112 LKMFQSWSGPEKLLALDELIDSCEPTQVKHMMQVIAPQFQRDFISLLPKE----LALYVL 1279
            +K F  WS  +++  ++ LI      Q  H+   + P  QRDFI+ LP++    +A  +L
Sbjct: 57   IKYFDQWSESDQVEFVEHLISRMCHYQHGHINSYLKPMLQRDFITALPEQGLDHIAENIL 116

Query: 1280 SFLEPKDLLQAAQTCRYWRILAEDNLLWREKCKEEGIDEPLH-------------IKRRK 1420
            S+L+ + L  A   C+ W+ +  + +LW++  +     +PL               K R 
Sbjct: 117  SYLDARSLCAAELVCKEWQRVISEGMLWKKLIERMVRTDPLWKGLSERRGWDQYLFKNRP 176

Query: 1421 VIKP--GFIHSPWKSAYIRQHRIDTNWRRGELKSPKV-LKGHDDHVITCLQFCGNRIVSG 1591
               P   F  S +         I++NWR G     ++  +  +   + CLQ+   +I+SG
Sbjct: 177  TDGPPNSFYRSLYPKIIQDIETIESNWRCGRHNLQRIQCRSENSKGVYCLQYDDEKIISG 236

Query: 1592 SDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDNIIISGSTDRTLRVWNAETGECIHTL 1771
              DN++K+W   + +CL+ L GHTG V   Q  + +I++GS+D T+RVW+  TGE ++TL
Sbjct: 237  LRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYDERVIVTGSSDSTVRVWDVNTGEVLNTL 296

Query: 1772 YGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCL---HVLMGHVAAVRCVQYDGRRV 1942
              H   V  +      +V+ S+D ++ VWD+ +   +    VL+GH AAV  V +D + +
Sbjct: 297  IHHNEAVLHLRFSNGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDFDDKYI 356

Query: 1943 VSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCI 2122
            VS + D  +KVW   T   + TL GH   +  LQ+    VVSGS D +IR+WD+E G C+
Sbjct: 357  VSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACL 416

Query: 2123 HTLTGHQSLTSGMELKDNILVSGNADSTVKIWDIKTG---------QCLQTLQGPNKHQS 2275
              L GH+ L   +   +  +VSG  D  +K+WD++            CL+TL    +H  
Sbjct: 417  RVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLV---EHSG 473

Query: 2276 AVTCLQFNKNFVITSSDDGTVKLWD 2350
             V  LQF++  +I+SS D T+ +WD
Sbjct: 474  RVFRLQFDEFQIISSSHDDTILIWD 498



 Score = 68.2 bits (165), Expect = 3e-11
 Identities = 28/75 (37%), Positives = 49/75 (65%)
 Frame = +2

Query: 2159 MELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTV 2338
            ++  D  ++SG  D+++KIWD  + +CL+ L G   H  +V CLQ+++  ++T S D TV
Sbjct: 226  LQYDDEKIISGLRDNSIKIWDKTSLECLKVLTG---HTGSVLCLQYDERVIVTGSSDSTV 282

Query: 2339 KLWDLKTGEFIRNLV 2383
            ++WD+ TGE +  L+
Sbjct: 283  RVWDVNTGEVLNTLI 297


>ref|XP_613703.2| PREDICTED: similar to F-box/WD-repeat protein 1A (F-box and
            WD-repeats protein beta-TrCP) (E3RSIkappaB)
            (pIkappaBalpha-E3 receptor subunit) isoform 2 [Bos
            taurus]
          Length = 579

 Score =  236 bits (603), Expect = 5e-62
 Identities = 145/447 (32%), Positives = 230/447 (51%), Gaps = 34/447 (7%)
 Frame = +2

Query: 1112 LKMFQSWSGPEKLLALDELIDSCEPTQVKHMMQVIAPQFQRDFISLLPKE----LALYVL 1279
            +K F+ WS  +++  ++ LI      Q  H+   + P  QRDFI+ LP      +A  +L
Sbjct: 112  VKYFEQWSESDQVEFVEHLISQMCHYQHGHINSYLKPMLQRDFITALPARGLDHIAENIL 171

Query: 1280 SFLEPKDLLQAAQTCRYWRILAEDNLLWREKCKEEGIDEPLH---IKRRK------VIKP 1432
            S+L+ + L  A   C+ W  +  D +LW++  +     + L     +RR         KP
Sbjct: 172  SYLDARSLCAAELVCKEWYRVTSDGMLWKKLIERMVRTDSLWRGLAERRGWGQYLFKNKP 231

Query: 1433 GFIHSPWKSAYIRQH--------RIDTNWRRGELKSPKV-LKGHDDHVITCLQFCGNRIV 1585
               ++P  S Y   +         I++NWR G     ++  +      + CLQ+   +IV
Sbjct: 232  PDGNAPPNSFYRALYPKIIQDIETIESNWRCGRHSLQRIHCRSETSKGVYCLQYDDQKIV 291

Query: 1586 SGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDNIIISGSTDRTLRVWNAETGECIH 1765
            SG  DNT+K+W   T +C R L GHTG V   Q  + +II+GS+D T+RVW+  TGE ++
Sbjct: 292  SGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQYDERVIITGSSDSTVRVWDVNTGEMLN 351

Query: 1766 TLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCL---HVLMGHVAAVRCVQYDGR 1936
            TL  H   V  +  +   +V+ S+D ++ VWD+ +   +    VL+GH AAV  V +D +
Sbjct: 352  TLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDK 411

Query: 1937 RVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGN 2116
             +VS + D  +KVW+  T   + TL GH   +  LQ+    VVSGS D +IR+WD+E G 
Sbjct: 412  YIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGA 471

Query: 2117 CIHTLTGHQSLTSGMELKDNILVSGNADSTVKIWDIKTG---------QCLQTLQGPNKH 2269
            C+  L GH+ L   +   +  +VSG  D  +K+WD+             CL+TL    +H
Sbjct: 472  CLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLV---EH 528

Query: 2270 QSAVTCLQFNKNFVITSSDDGTVKLWD 2350
               V  LQF++  +++SS D T+ +WD
Sbjct: 529  SGRVFRLQFDEFQIVSSSHDDTILIWD 555



 Score =  154 bits (388), Expect = 4e-37
 Identities = 86/260 (33%), Positives = 141/260 (54%), Gaps = 3/260 (1%)
 Frame = +2

Query: 1760 IHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRR 1939
            IH     +  V C+   ++++VSG RD T+++WD  T +C  +L GH  +V C+QYD R 
Sbjct: 270  IHCRSETSKGVYCLQYDDQKIVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQYDERV 329

Query: 1940 VVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNC 2119
            +++G+ D  V+VWD  T   L+TL  H   V  L+F+   +V+ S D SI VWD+ +   
Sbjct: 330  IITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTD 389

Query: 2120 I---HTLTGHQSLTSGMELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCL 2290
            I     L GH++  + ++  D  +VS + D T+K+W+  T + ++TL G   H+  + CL
Sbjct: 390  ITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLNG---HKRGIACL 446

Query: 2291 QFNKNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRN 2470
            Q+    V++ S D T++LWD++ G  +R L      G   +V  IR  N ++V      +
Sbjct: 447  QYRDRLVVSGSSDNTIRLWDIECGACLRVL-----EGHEELVRCIRFDNKRIV------S 495

Query: 2471 GTEEAKLLVLDFDVDMK*RA 2530
            G  + K+ V D    +  RA
Sbjct: 496  GAYDGKIKVWDLVAALDPRA 515


>ref|XP_608583.2| PREDICTED: similar to CG7568-PA [Bos taurus]
          Length = 441

 Score =  181 bits (459), Expect = 3e-45
 Identities = 98/301 (32%), Positives = 173/301 (57%), Gaps = 14/301 (4%)
 Frame = +2

Query: 1520 KVLKGHDDHVIT-CLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRD- 1693
            KVL+ H   +    L   G+  ++GS D T K+W   +G+ L TL GH   V++    + 
Sbjct: 112  KVLRAHILPLTNVALNKSGSCFITGSYDRTCKLWDTASGEELHTLEGHRNVVYAIAFNNP 171

Query: 1694 --NIIISGSTDRTLRVWNAETGECIHTLYGHTSTVRCMHLHEKR--VVSGSRDATLRVWD 1861
              + I +GS D+T ++W+ ETG+C HT  GHT+ + C+  + +   V +GS D T ++WD
Sbjct: 172  YGDKIATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWD 231

Query: 1862 IETGQCLHVLMGHVAAVRCVQYD--GRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVY 2035
            I++G+ +  L GH A +  + ++  G R+++G++D  V VW+ +T   ++TL GH   + 
Sbjct: 232  IQSGEEVFTLTGHSAEIISLSFNTSGNRIITGSFDHTVTVWEADTGRKVYTLIGHCAEIS 291

Query: 2036 SLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGH--QSLTSGMELKDNILVSGNADS 2203
            S  F  D   +++GS+D + ++WD   G C+ TLTGH  + L S  +    ++ + +AD 
Sbjct: 292  SAVFNWDCSLILTGSMDKTCKLWDAVNGKCVATLTGHDDEILDSCFDYTGKLIATASADG 351

Query: 2204 TVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNK--NFVITSSDDGTVKLWDLKTGEFIRN 2377
            T +I+   T +C+  L+G   H+  ++ + FN   N ++T S D T ++WD +TG+ ++ 
Sbjct: 352  TARIFSAATRECVTKLEG---HEGEISKISFNPQGNRLLTGSSDKTARIWDAQTGQCLQV 408

Query: 2378 L 2380
            L
Sbjct: 409  L 409



 Score =  169 bits (428), Expect = 1e-41
 Identities = 96/300 (32%), Positives = 162/300 (54%), Gaps = 15/300 (5%)
 Frame = +2

Query: 1493 WRRGELKSPKVLKGHDDHVITCLQF---CGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHT 1663
            W     +    L+GH + V+  + F    G++I +GS D T K+WS  TGKC  T  GHT
Sbjct: 145  WDTASGEELHTLEGHRN-VVYAIAFNNPYGDKIATGSFDKTCKLWSVETGKCYHTFRGHT 203

Query: 1664 GGV--WSSQMRDNIIISGSTDRTLRVWNAETGECIHTLYGHTSTVRCMHLHEK--RVVSG 1831
              +   S   +  ++ +GS D T ++W+ ++GE + TL GH++ +  +  +    R+++G
Sbjct: 204  AEIVCLSFNPQSTLVATGSMDTTAKLWDIQSGEEVFTLTGHSAEIISLSFNTSGNRIITG 263

Query: 1832 SRDATLRVWDIETGQCLHVLMGHVAAVRCV--QYDGRRVVSGAYDFMVKVWDPETETCLH 2005
            S D T+ VW+ +TG+ ++ L+GH A +      +D   +++G+ D   K+WD     C+ 
Sbjct: 264  SFDHTVTVWEADTGRKVYTLIGHCAEISSAVFNWDCSLILTGSMDKTCKLWDAVNGKCVA 323

Query: 2006 TLQGHTNRVYSLQFD--GIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMEL--KD 2173
            TL GH + +    FD  G  + + S D + R++   T  C+  L GH+   S +    + 
Sbjct: 324  TLTGHDDEILDSCFDYTGKLIATASADGTARIFSAATRECVTKLEGHEGEISKISFNPQG 383

Query: 2174 NILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFN--KNFVITSSDDGTVKLW 2347
            N L++G++D T +IWD +TGQCLQ L+G   H   +    FN   + +IT S D T ++W
Sbjct: 384  NRLLTGSSDKTARIWDAQTGQCLQVLEG---HTDEIFSCAFNYKGDIIITGSKDNTCRIW 440



 Score =  134 bits (336), Expect = 5e-31
 Identities = 71/227 (31%), Positives = 128/227 (56%), Gaps = 12/227 (5%)
 Frame = +2

Query: 1454 KSAYIRQHRIDTNWRRGELKSPK---VLKGHDDHVITC-LQFCGNRIVSGSDDNTLKVWS 1621
            +S  +    +DT  +  +++S +    L GH   +I+      GNRI++GS D+T+ VW 
Sbjct: 214  QSTLVATGSMDTTAKLWDIQSGEEVFTLTGHSAEIISLSFNTSGNRIITGSFDHTVTVWE 273

Query: 1622 AVTGKCLRTLVGHTGGVWSSQMR--DNIIISGSTDRTLRVWNAETGECIHTLYGHTSTV- 1792
            A TG+ + TL+GH   + S+      ++I++GS D+T ++W+A  G+C+ TL GH   + 
Sbjct: 274  ADTGRKVYTLIGHCAEISSAVFNWDCSLILTGSMDKTCKLWDAVNGKCVATLTGHDDEIL 333

Query: 1793 -RCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYD--GRRVVSGAYDF 1963
              C     K + + S D T R++   T +C+  L GH   +  + ++  G R+++G+ D 
Sbjct: 334  DSCFDYTGKLIATASADGTARIFSAATRECVTKLEGHEGEISKISFNPQGNRLLTGSSDK 393

Query: 1964 MVKVWDPETETCLHTLQGHTNRVYSLQFD--GIHVVSGSLDTSIRVW 2098
              ++WD +T  CL  L+GHT+ ++S  F+  G  +++GS D + R+W
Sbjct: 394  TARIWDAQTGQCLQVLEGHTDEIFSCAFNYKGDIIITGSKDNTCRIW 440



 Score =  110 bits (276), Expect = 4e-24
 Identities = 61/175 (34%), Positives = 98/175 (56%), Gaps = 9/175 (5%)
 Frame = +2

Query: 1886 VLMGHVAAVRCVQYD--GRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFD--- 2050
            VL  H+  +  V  +  G   ++G+YD   K+WD  +   LHTL+GH N VY++ F+   
Sbjct: 113  VLRAHILPLTNVALNKSGSCFITGSYDRTCKLWDTASGEELHTLEGHRNVVYAIAFNNPY 172

Query: 2051 GIHVVSGSLDTSIRVWDVETGNCIHTLTGHQS--LTSGMELKDNILVSGNADSTVKIWDI 2224
            G  + +GS D + ++W VETG C HT  GH +  +      +  ++ +G+ D+T K+WDI
Sbjct: 173  GDKIATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDI 232

Query: 2225 KTGQCLQTLQGPNKHQSAVTCLQFNK--NFVITSSDDGTVKLWDLKTGEFIRNLV 2383
            ++G+ + TL G   H + +  L FN   N +IT S D TV +W+  TG  +  L+
Sbjct: 233  QSGEEVFTLTG---HSAEIISLSFNTSGNRIITGSFDHTVTVWEADTGRKVYTLI 284


  Database: RefSeqBP
    Posted date:  Aug 1, 2006  7:14 PM
  Number of letters in database: 16,112,626
  Number of sequences in database:  33,508
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 86,751,683
Number of Sequences: 33508
Number of extensions: 2246956
Number of successful extensions: 11813
Number of sequences better than 1.0e-05: 10
Number of HSP's better than  0.0 without gapping: 6450
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9248
length of database: 16,112,626
effective HSP length: 110
effective length of database: 12,426,746
effective search space used: 9469180452
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

Search to RefSeqCP

BLASTX 2.2.10 [Oct-19-2004]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= PBL01_0074_B12
         (2620 letters)

Database: RefSeqCP 
           33,732 sequences; 19,266,565 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|XP_853624.1| PREDICTED: similar to F-box protein FBW7 isofor...  1093   0.0  
Alignment   gi|XP_532689.2| PREDICTED: similar to F-box protein FBW7 isofor...  1092   0.0  
Alignment   gi|XP_867720.1| PREDICTED: similar to F-box protein FBW7 isofor...  1063   0.0  
Alignment   gi|XP_867701.1| PREDICTED: similar to F-box protein FBW7 isofor...   573   e-163
Alignment   gi|XP_867711.1| PREDICTED: similar to F-box protein FBW7 isofor...   326   6e-89
Alignment   gi|XP_866627.1| PREDICTED: similar to F-box/WD-repeat protein 1...   242   2e-63
Alignment   gi|XP_852961.1| PREDICTED: similar to F-box and WD-40 domain pr...   242   2e-63
Alignment   gi|XP_866601.1| PREDICTED: similar to F-box and WD-40 domain pr...   242   2e-63
Alignment   gi|XP_536431.2| PREDICTED: similar to F-box and WD-40 domain pr...   242   2e-63
Alignment   gi|XP_866580.1| PREDICTED: similar to F-box and WD-40 domain pr...   242   2e-63

>ref|XP_853624.1| PREDICTED: similar to F-box protein FBW7 isoform 2 isoform 2 [Canis
            familiaris]
          Length = 627

 Score = 1093 bits (2828), Expect = 0.0
 Identities = 530/541 (97%), Positives = 531/541 (98%)
 Frame = +2

Query: 899  KMKRKLDHGSEVRSFSLGKKPCKVSEYTSTTGLVPCSATPTTFGDLRAANXXXXXXXXIT 1078
            KMKRKLDHGSEVRSFSLGKKPCKVSEYTSTTGLVPCSATPTTFGDLRAAN        IT
Sbjct: 87   KMKRKLDHGSEVRSFSLGKKPCKVSEYTSTTGLVPCSATPTTFGDLRAANGQGQQRRRIT 146

Query: 1079 SVQPPTGLQEWLKMFQSWSGPEKLLALDELIDSCEPTQVKHMMQVIAPQFQRDFISLLPK 1258
            SVQPPTGLQEWLKMFQSWSGPEKLLALDELIDSCEPTQVKHMMQVI PQFQRDFISLLPK
Sbjct: 147  SVQPPTGLQEWLKMFQSWSGPEKLLALDELIDSCEPTQVKHMMQVIEPQFQRDFISLLPK 206

Query: 1259 ELALYVLSFLEPKDLLQAAQTCRYWRILAEDNLLWREKCKEEGIDEPLHIKRRKVIKPGF 1438
            ELALYVLSFLEPKDLLQAAQTCRYWRILAEDNLLWREKCKEEGIDEPLHIKRRKVIKPGF
Sbjct: 207  ELALYVLSFLEPKDLLQAAQTCRYWRILAEDNLLWREKCKEEGIDEPLHIKRRKVIKPGF 266

Query: 1439 IHSPWKSAYIRQHRIDTNWRRGELKSPKVLKGHDDHVITCLQFCGNRIVSGSDDNTLKVW 1618
            IHSPWKSAYIRQHRIDTNWRRGELKSPKVLKGHDDHVITCLQFCGNRIVSGSDDNTLKVW
Sbjct: 267  IHSPWKSAYIRQHRIDTNWRRGELKSPKVLKGHDDHVITCLQFCGNRIVSGSDDNTLKVW 326

Query: 1619 SAVTGKCLRTLVGHTGGVWSSQMRDNIIISGSTDRTLRVWNAETGECIHTLYGHTSTVRC 1798
            SAVTGKCLRTLVGHTGGVWSSQMRDNIIISGSTDRTL+VWNAETGECIHTLYGHTSTVRC
Sbjct: 327  SAVTGKCLRTLVGHTGGVWSSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRC 386

Query: 1799 MHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVW 1978
            MHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVW
Sbjct: 387  MHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVW 446

Query: 1979 DPETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSG 2158
            DPETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSG
Sbjct: 447  DPETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSG 506

Query: 2159 MELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTV 2338
            MELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTV
Sbjct: 507  MELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTV 566

Query: 2339 KLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEEAKLLVLDFDVDM 2518
            KLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEE KLLVLDFDVDM
Sbjct: 567  KLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLDFDVDM 626

Query: 2519 K 2521
            K
Sbjct: 627  K 627


>ref|XP_532689.2| PREDICTED: similar to F-box protein FBW7 isoform 3 isoform 1 [Canis
            familiaris]
          Length = 589

 Score = 1092 bits (2825), Expect = 0.0
 Identities = 529/541 (97%), Positives = 531/541 (98%)
 Frame = +2

Query: 899  KMKRKLDHGSEVRSFSLGKKPCKVSEYTSTTGLVPCSATPTTFGDLRAANXXXXXXXXIT 1078
            +MKRKLDHGSEVRSFSLGKKPCKVSEYTSTTGLVPCSATPTTFGDLRAAN        IT
Sbjct: 49   RMKRKLDHGSEVRSFSLGKKPCKVSEYTSTTGLVPCSATPTTFGDLRAANGQGQQRRRIT 108

Query: 1079 SVQPPTGLQEWLKMFQSWSGPEKLLALDELIDSCEPTQVKHMMQVIAPQFQRDFISLLPK 1258
            SVQPPTGLQEWLKMFQSWSGPEKLLALDELIDSCEPTQVKHMMQVI PQFQRDFISLLPK
Sbjct: 109  SVQPPTGLQEWLKMFQSWSGPEKLLALDELIDSCEPTQVKHMMQVIEPQFQRDFISLLPK 168

Query: 1259 ELALYVLSFLEPKDLLQAAQTCRYWRILAEDNLLWREKCKEEGIDEPLHIKRRKVIKPGF 1438
            ELALYVLSFLEPKDLLQAAQTCRYWRILAEDNLLWREKCKEEGIDEPLHIKRRKVIKPGF
Sbjct: 169  ELALYVLSFLEPKDLLQAAQTCRYWRILAEDNLLWREKCKEEGIDEPLHIKRRKVIKPGF 228

Query: 1439 IHSPWKSAYIRQHRIDTNWRRGELKSPKVLKGHDDHVITCLQFCGNRIVSGSDDNTLKVW 1618
            IHSPWKSAYIRQHRIDTNWRRGELKSPKVLKGHDDHVITCLQFCGNRIVSGSDDNTLKVW
Sbjct: 229  IHSPWKSAYIRQHRIDTNWRRGELKSPKVLKGHDDHVITCLQFCGNRIVSGSDDNTLKVW 288

Query: 1619 SAVTGKCLRTLVGHTGGVWSSQMRDNIIISGSTDRTLRVWNAETGECIHTLYGHTSTVRC 1798
            SAVTGKCLRTLVGHTGGVWSSQMRDNIIISGSTDRTL+VWNAETGECIHTLYGHTSTVRC
Sbjct: 289  SAVTGKCLRTLVGHTGGVWSSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRC 348

Query: 1799 MHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVW 1978
            MHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVW
Sbjct: 349  MHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVW 408

Query: 1979 DPETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSG 2158
            DPETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSG
Sbjct: 409  DPETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSG 468

Query: 2159 MELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTV 2338
            MELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTV
Sbjct: 469  MELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTV 528

Query: 2339 KLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEEAKLLVLDFDVDM 2518
            KLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEE KLLVLDFDVDM
Sbjct: 529  KLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLDFDVDM 588

Query: 2519 K 2521
            K
Sbjct: 589  K 589


>ref|XP_867720.1| PREDICTED: similar to F-box protein FBW7 isoform 2 isoform 5 [Canis
            familiaris]
          Length = 637

 Score = 1063 bits (2750), Expect = 0.0
 Identities = 523/551 (94%), Positives = 525/551 (95%), Gaps = 10/551 (1%)
 Frame = +2

Query: 899  KMKRKLDHGSEVRSFSLGKKPCKVSEYTSTTGLVPCSATPTTFGDLRAANXXXXXXXXIT 1078
            KMKRKLDHGSEVRSFSLGKKPCKVSEYTSTTGLVPCSATPTTFGDLRAAN        IT
Sbjct: 87   KMKRKLDHGSEVRSFSLGKKPCKVSEYTSTTGLVPCSATPTTFGDLRAANGQGQQRRRIT 146

Query: 1079 SVQPPTGLQEWLKMFQSWSGPEKLLALDELIDSCEPTQVKHMMQVIAPQFQRDFISLLPK 1258
            SVQPPTGLQEWLKMFQSWSGPEKLLALDELIDSCEPTQVKHMMQVI PQFQRDFISLLPK
Sbjct: 147  SVQPPTGLQEWLKMFQSWSGPEKLLALDELIDSCEPTQVKHMMQVIEPQFQRDFISLLPK 206

Query: 1259 ELALYVLSFLEPKDLLQAAQTCRYWRILAEDNLLWREKCKEEG--IDEPLHIK------- 1411
            ELALYVLSFLEPKDLLQAAQTCRYWRILAEDNLLWREKCKEE   I+    I        
Sbjct: 207  ELALYVLSFLEPKDLLQAAQTCRYWRILAEDNLLWREKCKEEETIIEHETDILYVILPFK 266

Query: 1412 -RRKVIKPGFIHSPWKSAYIRQHRIDTNWRRGELKSPKVLKGHDDHVITCLQFCGNRIVS 1588
             RRKVIKPGFIHSPWKSAYIRQHRIDTNWRRGELKSPKVLKGHDDHVITCLQFCGNRIVS
Sbjct: 267  GRRKVIKPGFIHSPWKSAYIRQHRIDTNWRRGELKSPKVLKGHDDHVITCLQFCGNRIVS 326

Query: 1589 GSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDNIIISGSTDRTLRVWNAETGECIHT 1768
            GSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDNIIISGSTDRTL+VWNAETGECIHT
Sbjct: 327  GSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDNIIISGSTDRTLKVWNAETGECIHT 386

Query: 1769 LYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVS 1948
            LYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVS
Sbjct: 387  LYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVS 446

Query: 1949 GAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHT 2128
            GAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHT
Sbjct: 447  GAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHT 506

Query: 2129 LTGHQSLTSGMELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNF 2308
            LTGHQSLTSGMELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNF
Sbjct: 507  LTGHQSLTSGMELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNF 566

Query: 2309 VITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEEAK 2488
            VITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEE K
Sbjct: 567  VITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEETK 626

Query: 2489 LLVLDFDVDMK 2521
            LLVLDFDVDMK
Sbjct: 627  LLVLDFDVDMK 637


>ref|XP_867701.1| PREDICTED: similar to F-box protein FBW7 isoform 2 isoform 3 [Canis
            familiaris]
          Length = 279

 Score =  573 bits (1476), Expect = e-163
 Identities = 277/279 (99%), Positives = 278/279 (99%)
 Frame = +2

Query: 1685 MRDNIIISGSTDRTLRVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDI 1864
            MRDNIIISGSTDRTL+VWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDI
Sbjct: 1    MRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDI 60

Query: 1865 ETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQ 2044
            ETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQ
Sbjct: 61   ETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQ 120

Query: 2045 FDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNILVSGNADSTVKIWDI 2224
            FDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNILVSGNADSTVKIWDI
Sbjct: 121  FDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNILVSGNADSTVKIWDI 180

Query: 2225 KTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGS 2404
            KTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGS
Sbjct: 181  KTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGS 240

Query: 2405 GGVVWRIRASNTKLVCAVGSRNGTEEAKLLVLDFDVDMK 2521
            GGVVWRIRASNTKLVCAVGSRNGTEE KLLVLDFDVDMK
Sbjct: 241  GGVVWRIRASNTKLVCAVGSRNGTEETKLLVLDFDVDMK 279



 Score =  169 bits (429), Expect = 1e-41
 Identities = 92/238 (38%), Positives = 127/238 (53%), Gaps = 43/238 (18%)
 Frame = +2

Query: 1574 NRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDNIIISGSTDRTLRVWNAETG 1753
            N I+SGS D TLKVW+A TG+C+ TL GHT  V    + +  ++SGS D TLRVW+ ETG
Sbjct: 4    NIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETG 63

Query: 1754 ECIHTLYGHTSTVRCMHLHEKRVVSG---------------------------------- 1831
            +C+H L GH + VRC+    +RVVSG                                  
Sbjct: 64   QCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDG 123

Query: 1832 ------SRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETE 1993
                  S D ++RVWD+ETG C+H L GH +    ++     +VSG  D  VK+WD +T 
Sbjct: 124  IHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNILVSGNADSTVKIWDIKTG 183

Query: 1994 TCLHTLQG---HTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSG 2158
             CL TLQG   H + V  LQF+   V++ S D ++++WD++TG  I  L   +S  SG
Sbjct: 184  QCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSG 241


>ref|XP_867711.1| PREDICTED: similar to F-box protein FBW7 isoform 2 isoform 4 [Canis
            familiaris]
          Length = 165

 Score =  326 bits (836), Expect = 6e-89
 Identities = 160/161 (99%), Positives = 160/161 (99%)
 Frame = +2

Query: 2039 LQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNILVSGNADSTVKIW 2218
            LQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNILVSGNADSTVKIW
Sbjct: 5    LQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNILVSGNADSTVKIW 64

Query: 2219 DIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLWDLKTGEFIRNLVTLESG 2398
            DIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLWDLKTGEFIRNLVTLESG
Sbjct: 65   DIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLWDLKTGEFIRNLVTLESG 124

Query: 2399 GSGGVVWRIRASNTKLVCAVGSRNGTEEAKLLVLDFDVDMK 2521
            GSGGVVWRIRASNTKLVCAVGSRNGTEE KLLVLDFDVDMK
Sbjct: 125  GSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLDFDVDMK 165



 Score =  107 bits (267), Expect = 6e-23
 Identities = 45/119 (37%), Positives = 78/119 (65%), Gaps = 3/119 (2%)
 Frame = +2

Query: 1547 VITCLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDNIIISGSTDRT 1726
            ++  LQF G  +VSGS D +++VW   TG C+ TL GH       +++DNI++SG+ D T
Sbjct: 1    MLCLLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNILVSGNADST 60

Query: 1727 LRVWNAETGECIHTLYG---HTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLM 1894
            +++W+ +TG+C+ TL G   H S V C+  ++  V++ S D T+++WD++TG+ +  L+
Sbjct: 61   VKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLWDLKTGEFIRNLV 119



 Score =  103 bits (258), Expect = 6e-22
 Identities = 48/107 (44%), Positives = 71/107 (66%), Gaps = 3/107 (2%)
 Frame = +2

Query: 1700 IISGSTDRTLRVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQC 1879
            ++SGS D ++RVW+ ETG CIHTL GH S    M L +  +VSG+ D+T+++WDI+TGQC
Sbjct: 12   VVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNILVSGNADSTVKIWDIKTGQC 71

Query: 1880 LHVLMG---HVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTL 2011
            L  L G   H +AV C+Q++   V++ + D  VK+WD +T   +  L
Sbjct: 72   LQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLWDLKTGEFIRNL 118



 Score = 97.4 bits (241), Expect = 6e-20
 Identities = 50/116 (43%), Positives = 71/116 (61%), Gaps = 3/116 (2%)
 Frame = +2

Query: 1820 VVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETC 1999
            VVSGS D ++RVWD+ETG C+H L GH +    ++     +VSG  D  VK+WD +T  C
Sbjct: 12   VVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNILVSGNADSTVKIWDIKTGQC 71

Query: 2000 LHTLQG---HTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSG 2158
            L TLQG   H + V  LQF+   V++ S D ++++WD++TG  I  L   +S  SG
Sbjct: 72   LQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSG 127


>ref|XP_866627.1| PREDICTED: similar to F-box/WD-repeat protein 11 (F-box/WD-repeat
            protein 1B) (F-box and WD-repeats protein beta-TrCP2)
            isoform 8 [Canis familiaris]
          Length = 542

 Score =  242 bits (617), Expect = 2e-63
 Identities = 140/445 (31%), Positives = 229/445 (51%), Gaps = 32/445 (7%)
 Frame = +2

Query: 1112 LKMFQSWSGPEKLLALDELIDSCEPTQVKHMMQVIAPQFQRDFISLLPKE----LALYVL 1279
            +K F  WS  +++  ++ LI      Q  H+   + P  QRDFI+ LP++    +A  +L
Sbjct: 77   IKYFDQWSESDQVEFVEHLISRMCHYQHGHINSYLKPMLQRDFITALPEQGLDHIAENIL 136

Query: 1280 SFLEPKDLLQAAQTCRYWRILAEDNLLWREKCKEEGIDEPLH-------------IKRRK 1420
            S+L+ + L  A   C+ W+ +  + +LW++  +     +PL               K R 
Sbjct: 137  SYLDARSLCAAELVCKEWQRVISEGMLWKKLIERMVRTDPLWKGLSERRGWDQYLFKNRP 196

Query: 1421 VIKP--GFIHSPWKSAYIRQHRIDTNWRRGELKSPKV-LKGHDDHVITCLQFCGNRIVSG 1591
               P   F  S +         I++NWR G     ++  +  +   + CLQ+   +I+SG
Sbjct: 197  TDGPPNSFYRSLYPKIIQDIETIESNWRCGRHNLQRIQCRSENSKGVYCLQYDDEKIISG 256

Query: 1592 SDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDNIIISGSTDRTLRVWNAETGECIHTL 1771
              DN++K+W   + +CL+ L GHTG V   Q  + +I++GS+D T+RVW+  TGE ++TL
Sbjct: 257  LRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYDERVIVTGSSDSTVRVWDVNTGEVLNTL 316

Query: 1772 YGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCL---HVLMGHVAAVRCVQYDGRRV 1942
              H   V  +      +V+ S+D ++ VWD+ +   +    VL+GH AAV  V +D + +
Sbjct: 317  IHHNEAVLHLRFSNGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDFDDKYI 376

Query: 1943 VSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCI 2122
            VS + D  +KVW   T   + TL GH   +  LQ+    VVSGS D +IR+WD+E G C+
Sbjct: 377  VSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACL 436

Query: 2123 HTLTGHQSLTSGMELKDNILVSGNADSTVKIWDIKTG---------QCLQTLQGPNKHQS 2275
              L GH+ L   +   +  +VSG  D  +K+WD++            CL+TL    +H  
Sbjct: 437  RVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLV---EHSG 493

Query: 2276 AVTCLQFNKNFVITSSDDGTVKLWD 2350
             V  LQF++  +I+SS D T+ +WD
Sbjct: 494  RVFRLQFDEFQIISSSHDDTILIWD 518



 Score = 68.2 bits (165), Expect = 4e-11
 Identities = 28/75 (37%), Positives = 49/75 (65%)
 Frame = +2

Query: 2159 MELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTV 2338
            ++  D  ++SG  D+++KIWD  + +CL+ L G   H  +V CLQ+++  ++T S D TV
Sbjct: 246  LQYDDEKIISGLRDNSIKIWDKTSLECLKVLTG---HTGSVLCLQYDERVIVTGSSDSTV 302

Query: 2339 KLWDLKTGEFIRNLV 2383
            ++WD+ TGE +  L+
Sbjct: 303  RVWDVNTGEVLNTLI 317


>ref|XP_852961.1| PREDICTED: similar to F-box and WD-40 domain protein 11 isoform 2
            [Canis familiaris]
          Length = 563

 Score =  242 bits (617), Expect = 2e-63
 Identities = 140/445 (31%), Positives = 229/445 (51%), Gaps = 32/445 (7%)
 Frame = +2

Query: 1112 LKMFQSWSGPEKLLALDELIDSCEPTQVKHMMQVIAPQFQRDFISLLPKE----LALYVL 1279
            +K F  WS  +++  ++ LI      Q  H+   + P  QRDFI+ LP++    +A  +L
Sbjct: 98   IKYFDQWSESDQVEFVEHLISRMCHYQHGHINSYLKPMLQRDFITALPEQGLDHIAENIL 157

Query: 1280 SFLEPKDLLQAAQTCRYWRILAEDNLLWREKCKEEGIDEPLH-------------IKRRK 1420
            S+L+ + L  A   C+ W+ +  + +LW++  +     +PL               K R 
Sbjct: 158  SYLDARSLCAAELVCKEWQRVISEGMLWKKLIERMVRTDPLWKGLSERRGWDQYLFKNRP 217

Query: 1421 VIKP--GFIHSPWKSAYIRQHRIDTNWRRGELKSPKV-LKGHDDHVITCLQFCGNRIVSG 1591
               P   F  S +         I++NWR G     ++  +  +   + CLQ+   +I+SG
Sbjct: 218  TDGPPNSFYRSLYPKIIQDIETIESNWRCGRHNLQRIQCRSENSKGVYCLQYDDEKIISG 277

Query: 1592 SDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDNIIISGSTDRTLRVWNAETGECIHTL 1771
              DN++K+W   + +CL+ L GHTG V   Q  + +I++GS+D T+RVW+  TGE ++TL
Sbjct: 278  LRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYDERVIVTGSSDSTVRVWDVNTGEVLNTL 337

Query: 1772 YGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCL---HVLMGHVAAVRCVQYDGRRV 1942
              H   V  +      +V+ S+D ++ VWD+ +   +    VL+GH AAV  V +D + +
Sbjct: 338  IHHNEAVLHLRFSNGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDFDDKYI 397

Query: 1943 VSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCI 2122
            VS + D  +KVW   T   + TL GH   +  LQ+    VVSGS D +IR+WD+E G C+
Sbjct: 398  VSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACL 457

Query: 2123 HTLTGHQSLTSGMELKDNILVSGNADSTVKIWDIKTG---------QCLQTLQGPNKHQS 2275
              L GH+ L   +   +  +VSG  D  +K+WD++            CL+TL    +H  
Sbjct: 458  RVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLV---EHSG 514

Query: 2276 AVTCLQFNKNFVITSSDDGTVKLWD 2350
             V  LQF++  +I+SS D T+ +WD
Sbjct: 515  RVFRLQFDEFQIISSSHDDTILIWD 539



 Score = 68.2 bits (165), Expect = 4e-11
 Identities = 28/75 (37%), Positives = 49/75 (65%)
 Frame = +2

Query: 2159 MELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTV 2338
            ++  D  ++SG  D+++KIWD  + +CL+ L G   H  +V CLQ+++  ++T S D TV
Sbjct: 267  LQYDDEKIISGLRDNSIKIWDKTSLECLKVLTG---HTGSVLCLQYDERVIVTGSSDSTV 323

Query: 2339 KLWDLKTGEFIRNLV 2383
            ++WD+ TGE +  L+
Sbjct: 324  RVWDVNTGEVLNTLI 338


>ref|XP_866601.1| PREDICTED: similar to F-box and WD-40 domain protein 11 isoform 7
            [Canis familiaris]
          Length = 531

 Score =  242 bits (617), Expect = 2e-63
 Identities = 140/445 (31%), Positives = 229/445 (51%), Gaps = 32/445 (7%)
 Frame = +2

Query: 1112 LKMFQSWSGPEKLLALDELIDSCEPTQVKHMMQVIAPQFQRDFISLLPKE----LALYVL 1279
            +K F  WS  +++  ++ LI      Q  H+   + P  QRDFI+ LP++    +A  +L
Sbjct: 66   IKYFDQWSESDQVEFVEHLISRMCHYQHGHINSYLKPMLQRDFITALPEQGLDHIAENIL 125

Query: 1280 SFLEPKDLLQAAQTCRYWRILAEDNLLWREKCKEEGIDEPLH-------------IKRRK 1420
            S+L+ + L  A   C+ W+ +  + +LW++  +     +PL               K R 
Sbjct: 126  SYLDARSLCAAELVCKEWQRVISEGMLWKKLIERMVRTDPLWKGLSERRGWDQYLFKNRP 185

Query: 1421 VIKP--GFIHSPWKSAYIRQHRIDTNWRRGELKSPKV-LKGHDDHVITCLQFCGNRIVSG 1591
               P   F  S +         I++NWR G     ++  +  +   + CLQ+   +I+SG
Sbjct: 186  TDGPPNSFYRSLYPKIIQDIETIESNWRCGRHNLQRIQCRSENSKGVYCLQYDDEKIISG 245

Query: 1592 SDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDNIIISGSTDRTLRVWNAETGECIHTL 1771
              DN++K+W   + +CL+ L GHTG V   Q  + +I++GS+D T+RVW+  TGE ++TL
Sbjct: 246  LRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYDERVIVTGSSDSTVRVWDVNTGEVLNTL 305

Query: 1772 YGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCL---HVLMGHVAAVRCVQYDGRRV 1942
              H   V  +      +V+ S+D ++ VWD+ +   +    VL+GH AAV  V +D + +
Sbjct: 306  IHHNEAVLHLRFSNGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDFDDKYI 365

Query: 1943 VSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCI 2122
            VS + D  +KVW   T   + TL GH   +  LQ+    VVSGS D +IR+WD+E G C+
Sbjct: 366  VSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACL 425

Query: 2123 HTLTGHQSLTSGMELKDNILVSGNADSTVKIWDIKTG---------QCLQTLQGPNKHQS 2275
              L GH+ L   +   +  +VSG  D  +K+WD++            CL+TL    +H  
Sbjct: 426  RVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLV---EHSG 482

Query: 2276 AVTCLQFNKNFVITSSDDGTVKLWD 2350
             V  LQF++  +I+SS D T+ +WD
Sbjct: 483  RVFRLQFDEFQIISSSHDDTILIWD 507



 Score = 68.2 bits (165), Expect = 4e-11
 Identities = 28/75 (37%), Positives = 49/75 (65%)
 Frame = +2

Query: 2159 MELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTV 2338
            ++  D  ++SG  D+++KIWD  + +CL+ L G   H  +V CLQ+++  ++T S D TV
Sbjct: 235  LQYDDEKIISGLRDNSIKIWDKTSLECLKVLTG---HTGSVLCLQYDERVIVTGSSDSTV 291

Query: 2339 KLWDLKTGEFIRNLV 2383
            ++WD+ TGE +  L+
Sbjct: 292  RVWDVNTGEVLNTLI 306


>ref|XP_536431.2| PREDICTED: similar to F-box and WD-40 domain protein 1B isoform B
            isoform 1 [Canis familiaris]
          Length = 529

 Score =  242 bits (617), Expect = 2e-63
 Identities = 140/445 (31%), Positives = 229/445 (51%), Gaps = 32/445 (7%)
 Frame = +2

Query: 1112 LKMFQSWSGPEKLLALDELIDSCEPTQVKHMMQVIAPQFQRDFISLLPKE----LALYVL 1279
            +K F  WS  +++  ++ LI      Q  H+   + P  QRDFI+ LP++    +A  +L
Sbjct: 64   IKYFDQWSESDQVEFVEHLISRMCHYQHGHINSYLKPMLQRDFITALPEQGLDHIAENIL 123

Query: 1280 SFLEPKDLLQAAQTCRYWRILAEDNLLWREKCKEEGIDEPLH-------------IKRRK 1420
            S+L+ + L  A   C+ W+ +  + +LW++  +     +PL               K R 
Sbjct: 124  SYLDARSLCAAELVCKEWQRVISEGMLWKKLIERMVRTDPLWKGLSERRGWDQYLFKNRP 183

Query: 1421 VIKP--GFIHSPWKSAYIRQHRIDTNWRRGELKSPKV-LKGHDDHVITCLQFCGNRIVSG 1591
               P   F  S +         I++NWR G     ++  +  +   + CLQ+   +I+SG
Sbjct: 184  TDGPPNSFYRSLYPKIIQDIETIESNWRCGRHNLQRIQCRSENSKGVYCLQYDDEKIISG 243

Query: 1592 SDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDNIIISGSTDRTLRVWNAETGECIHTL 1771
              DN++K+W   + +CL+ L GHTG V   Q  + +I++GS+D T+RVW+  TGE ++TL
Sbjct: 244  LRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYDERVIVTGSSDSTVRVWDVNTGEVLNTL 303

Query: 1772 YGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCL---HVLMGHVAAVRCVQYDGRRV 1942
              H   V  +      +V+ S+D ++ VWD+ +   +    VL+GH AAV  V +D + +
Sbjct: 304  IHHNEAVLHLRFSNGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDFDDKYI 363

Query: 1943 VSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCI 2122
            VS + D  +KVW   T   + TL GH   +  LQ+    VVSGS D +IR+WD+E G C+
Sbjct: 364  VSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACL 423

Query: 2123 HTLTGHQSLTSGMELKDNILVSGNADSTVKIWDIKTG---------QCLQTLQGPNKHQS 2275
              L GH+ L   +   +  +VSG  D  +K+WD++            CL+TL    +H  
Sbjct: 424  RVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLV---EHSG 480

Query: 2276 AVTCLQFNKNFVITSSDDGTVKLWD 2350
             V  LQF++  +I+SS D T+ +WD
Sbjct: 481  RVFRLQFDEFQIISSSHDDTILIWD 505



 Score = 68.2 bits (165), Expect = 4e-11
 Identities = 28/75 (37%), Positives = 49/75 (65%)
 Frame = +2

Query: 2159 MELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTV 2338
            ++  D  ++SG  D+++KIWD  + +CL+ L G   H  +V CLQ+++  ++T S D TV
Sbjct: 233  LQYDDEKIISGLRDNSIKIWDKTSLECLKVLTG---HTGSVLCLQYDERVIVTGSSDSTV 289

Query: 2339 KLWDLKTGEFIRNLV 2383
            ++WD+ TGE +  L+
Sbjct: 290  RVWDVNTGEVLNTLI 304


>ref|XP_866580.1| PREDICTED: similar to F-box and WD-40 domain protein 1B isoform B
            isoform 6 [Canis familiaris]
          Length = 510

 Score =  242 bits (617), Expect = 2e-63
 Identities = 140/445 (31%), Positives = 229/445 (51%), Gaps = 32/445 (7%)
 Frame = +2

Query: 1112 LKMFQSWSGPEKLLALDELIDSCEPTQVKHMMQVIAPQFQRDFISLLPKE----LALYVL 1279
            +K F  WS  +++  ++ LI      Q  H+   + P  QRDFI+ LP++    +A  +L
Sbjct: 45   IKYFDQWSESDQVEFVEHLISRMCHYQHGHINSYLKPMLQRDFITALPEQGLDHIAENIL 104

Query: 1280 SFLEPKDLLQAAQTCRYWRILAEDNLLWREKCKEEGIDEPLH-------------IKRRK 1420
            S+L+ + L  A   C+ W+ +  + +LW++  +     +PL               K R 
Sbjct: 105  SYLDARSLCAAELVCKEWQRVISEGMLWKKLIERMVRTDPLWKGLSERRGWDQYLFKNRP 164

Query: 1421 VIKP--GFIHSPWKSAYIRQHRIDTNWRRGELKSPKV-LKGHDDHVITCLQFCGNRIVSG 1591
               P   F  S +         I++NWR G     ++  +  +   + CLQ+   +I+SG
Sbjct: 165  TDGPPNSFYRSLYPKIIQDIETIESNWRCGRHNLQRIQCRSENSKGVYCLQYDDEKIISG 224

Query: 1592 SDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDNIIISGSTDRTLRVWNAETGECIHTL 1771
              DN++K+W   + +CL+ L GHTG V   Q  + +I++GS+D T+RVW+  TGE ++TL
Sbjct: 225  LRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYDERVIVTGSSDSTVRVWDVNTGEVLNTL 284

Query: 1772 YGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCL---HVLMGHVAAVRCVQYDGRRV 1942
              H   V  +      +V+ S+D ++ VWD+ +   +    VL+GH AAV  V +D + +
Sbjct: 285  IHHNEAVLHLRFSNGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDFDDKYI 344

Query: 1943 VSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCI 2122
            VS + D  +KVW   T   + TL GH   +  LQ+    VVSGS D +IR+WD+E G C+
Sbjct: 345  VSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACL 404

Query: 2123 HTLTGHQSLTSGMELKDNILVSGNADSTVKIWDIKTG---------QCLQTLQGPNKHQS 2275
              L GH+ L   +   +  +VSG  D  +K+WD++            CL+TL    +H  
Sbjct: 405  RVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLV---EHSG 461

Query: 2276 AVTCLQFNKNFVITSSDDGTVKLWD 2350
             V  LQF++  +I+SS D T+ +WD
Sbjct: 462  RVFRLQFDEFQIISSSHDDTILIWD 486



 Score = 68.2 bits (165), Expect = 4e-11
 Identities = 28/75 (37%), Positives = 49/75 (65%)
 Frame = +2

Query: 2159 MELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTV 2338
            ++  D  ++SG  D+++KIWD  + +CL+ L G   H  +V CLQ+++  ++T S D TV
Sbjct: 214  LQYDDEKIISGLRDNSIKIWDKTSLECLKVLTG---HTGSVLCLQYDERVIVTGSSDSTV 270

Query: 2339 KLWDLKTGEFIRNLV 2383
            ++WD+ TGE +  L+
Sbjct: 271  RVWDVNTGEVLNTLI 285


  Database: RefSeqCP
    Posted date:  Aug 1, 2006  9:25 PM
  Number of letters in database: 19,266,565
  Number of sequences in database:  33,732
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 101,729,778
Number of Sequences: 33732
Number of extensions: 2624527
Number of successful extensions: 13537
Number of sequences better than 1.0e-05: 10
Number of HSP's better than  0.0 without gapping: 7229
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10500
length of database: 19,266,565
effective HSP length: 112
effective length of database: 15,488,581
effective search space used: 11771321560
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

Search to RefSeqHP

BLASTX 2.2.10 [Oct-19-2004]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= PBL01_0074_B12
         (2620 letters)

Database: RefSeqHP 
           39,411 sequences; 17,774,539 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_361014.1| F-box protein FBW7 isoform 1 [Homo sapiens]         1214   0.0  
Alignment   gi|NP_060785.2| F-box protein FBW7 isoform 2 [Homo sapiens]         1093   0.0  
Alignment   gi|NP_001013433.1| F-box protein FBW7 isoform 3 [Homo sapiens]      1092   0.0  
Alignment   gi|NP_036432.2| F-box and WD-40 domain protein 1B isoform C [Ho...   242   1e-63
Alignment   gi|NP_387449.2| F-box and WD-40 domain protein 1B isoform A [Ho...   242   1e-63
Alignment   gi|NP_387448.2| F-box and WD-40 domain protein 1B isoform B [Ho...   242   1e-63
Alignment   gi|NP_378663.1| beta-transducin repeat containing protein isofo...   237   3e-62
Alignment   gi|NP_003930.1| beta-transducin repeat containing protein isofo...   237   3e-62
Alignment   gi|NP_849143.1| hypothetical protein LOC164781 [Homo sapiens]        182   1e-45
Alignment   gi|NP_438172.1| WD repeat domain 5 [Homo sapiens]                    168   2e-41

>ref|NP_361014.1| F-box protein FBW7 isoform 1 [Homo sapiens]
          Length = 707

 Score = 1214 bits (3142), Expect = 0.0
 Identities = 606/707 (85%), Positives = 608/707 (85%), Gaps = 2/707 (0%)
 Frame = +2

Query: 407  MNQELLSVGSKRRRTGGSLRGNPSSSQADXXXXXXXXXXXXXXXXXXXX--HTARNGEVV 580
            MNQELLSVGSKRRRTGGSLRGNPSSSQ D                      HTARNGEVV
Sbjct: 1    MNQELLSVGSKRRRTGGSLRGNPSSSQVDEEQMNRVVEEEQQQQLRQQEEEHTARNGEVV 60

Query: 581  GAEPRPGAQNASQQGQLEENNNRFISVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 760
            G EPRPG QN SQQGQLEENNNRFISV                                 
Sbjct: 61   GVEPRPGGQNDSQQGQLEENNNRFISVDEDSSGNQEEQEEDEEHAGEQDEEDEEEEEMDQ 120

Query: 761  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLPIHQLSSPFYTKTTKMKRKLDHGSEVRS 940
                                          DLP+HQLSSPFYTKTTKMKRKLDHGSEVRS
Sbjct: 121  ESDDFDQSDDSSREDEHTHTNSVTNSSSIVDLPVHQLSSPFYTKTTKMKRKLDHGSEVRS 180

Query: 941  FSLGKKPCKVSEYTSTTGLVPCSATPTTFGDLRAANXXXXXXXXITSVQPPTGLQEWLKM 1120
            FSLGKKPCKVSEYTSTTGLVPCSATPTTFGDLRAAN        ITSVQPPTGLQEWLKM
Sbjct: 181  FSLGKKPCKVSEYTSTTGLVPCSATPTTFGDLRAANGQGQQRRRITSVQPPTGLQEWLKM 240

Query: 1121 FQSWSGPEKLLALDELIDSCEPTQVKHMMQVIAPQFQRDFISLLPKELALYVLSFLEPKD 1300
            FQSWSGPEKLLALDELIDSCEPTQVKHMMQVI PQFQRDFISLLPKELALYVLSFLEPKD
Sbjct: 241  FQSWSGPEKLLALDELIDSCEPTQVKHMMQVIEPQFQRDFISLLPKELALYVLSFLEPKD 300

Query: 1301 LLQAAQTCRYWRILAEDNLLWREKCKEEGIDEPLHIKRRKVIKPGFIHSPWKSAYIRQHR 1480
            LLQAAQTCRYWRILAEDNLLWREKCKEEGIDEPLHIKRRKVIKPGFIHSPWKSAYIRQHR
Sbjct: 301  LLQAAQTCRYWRILAEDNLLWREKCKEEGIDEPLHIKRRKVIKPGFIHSPWKSAYIRQHR 360

Query: 1481 IDTNWRRGELKSPKVLKGHDDHVITCLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGH 1660
            IDTNWRRGELKSPKVLKGHDDHVITCLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGH
Sbjct: 361  IDTNWRRGELKSPKVLKGHDDHVITCLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGH 420

Query: 1661 TGGVWSSQMRDNIIISGSTDRTLRVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRD 1840
            TGGVWSSQMRDNIIISGSTDRTL+VWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRD
Sbjct: 421  TGGVWSSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRD 480

Query: 1841 ATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGH 2020
            ATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGH
Sbjct: 481  ATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGH 540

Query: 2021 TNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNILVSGNAD 2200
            TNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNILVSGNAD
Sbjct: 541  TNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNILVSGNAD 600

Query: 2201 STVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLWDLKTGEFIRNL 2380
            STVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLWDLKTGEFIRNL
Sbjct: 601  STVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLWDLKTGEFIRNL 660

Query: 2381 VTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEEAKLLVLDFDVDMK 2521
            VTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEE KLLVLDFDVDMK
Sbjct: 661  VTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLDFDVDMK 707


>ref|NP_060785.2| F-box protein FBW7 isoform 2 [Homo sapiens]
          Length = 627

 Score = 1093 bits (2828), Expect = 0.0
 Identities = 530/541 (97%), Positives = 531/541 (98%)
 Frame = +2

Query: 899  KMKRKLDHGSEVRSFSLGKKPCKVSEYTSTTGLVPCSATPTTFGDLRAANXXXXXXXXIT 1078
            KMKRKLDHGSEVRSFSLGKKPCKVSEYTSTTGLVPCSATPTTFGDLRAAN        IT
Sbjct: 87   KMKRKLDHGSEVRSFSLGKKPCKVSEYTSTTGLVPCSATPTTFGDLRAANGQGQQRRRIT 146

Query: 1079 SVQPPTGLQEWLKMFQSWSGPEKLLALDELIDSCEPTQVKHMMQVIAPQFQRDFISLLPK 1258
            SVQPPTGLQEWLKMFQSWSGPEKLLALDELIDSCEPTQVKHMMQVI PQFQRDFISLLPK
Sbjct: 147  SVQPPTGLQEWLKMFQSWSGPEKLLALDELIDSCEPTQVKHMMQVIEPQFQRDFISLLPK 206

Query: 1259 ELALYVLSFLEPKDLLQAAQTCRYWRILAEDNLLWREKCKEEGIDEPLHIKRRKVIKPGF 1438
            ELALYVLSFLEPKDLLQAAQTCRYWRILAEDNLLWREKCKEEGIDEPLHIKRRKVIKPGF
Sbjct: 207  ELALYVLSFLEPKDLLQAAQTCRYWRILAEDNLLWREKCKEEGIDEPLHIKRRKVIKPGF 266

Query: 1439 IHSPWKSAYIRQHRIDTNWRRGELKSPKVLKGHDDHVITCLQFCGNRIVSGSDDNTLKVW 1618
            IHSPWKSAYIRQHRIDTNWRRGELKSPKVLKGHDDHVITCLQFCGNRIVSGSDDNTLKVW
Sbjct: 267  IHSPWKSAYIRQHRIDTNWRRGELKSPKVLKGHDDHVITCLQFCGNRIVSGSDDNTLKVW 326

Query: 1619 SAVTGKCLRTLVGHTGGVWSSQMRDNIIISGSTDRTLRVWNAETGECIHTLYGHTSTVRC 1798
            SAVTGKCLRTLVGHTGGVWSSQMRDNIIISGSTDRTL+VWNAETGECIHTLYGHTSTVRC
Sbjct: 327  SAVTGKCLRTLVGHTGGVWSSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRC 386

Query: 1799 MHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVW 1978
            MHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVW
Sbjct: 387  MHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVW 446

Query: 1979 DPETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSG 2158
            DPETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSG
Sbjct: 447  DPETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSG 506

Query: 2159 MELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTV 2338
            MELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTV
Sbjct: 507  MELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTV 566

Query: 2339 KLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEEAKLLVLDFDVDM 2518
            KLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEE KLLVLDFDVDM
Sbjct: 567  KLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLDFDVDM 626

Query: 2519 K 2521
            K
Sbjct: 627  K 627


>ref|NP_001013433.1| F-box protein FBW7 isoform 3 [Homo sapiens]
          Length = 589

 Score = 1092 bits (2825), Expect = 0.0
 Identities = 529/541 (97%), Positives = 531/541 (98%)
 Frame = +2

Query: 899  KMKRKLDHGSEVRSFSLGKKPCKVSEYTSTTGLVPCSATPTTFGDLRAANXXXXXXXXIT 1078
            +MKRKLDHGSEVRSFSLGKKPCKVSEYTSTTGLVPCSATPTTFGDLRAAN        IT
Sbjct: 49   RMKRKLDHGSEVRSFSLGKKPCKVSEYTSTTGLVPCSATPTTFGDLRAANGQGQQRRRIT 108

Query: 1079 SVQPPTGLQEWLKMFQSWSGPEKLLALDELIDSCEPTQVKHMMQVIAPQFQRDFISLLPK 1258
            SVQPPTGLQEWLKMFQSWSGPEKLLALDELIDSCEPTQVKHMMQVI PQFQRDFISLLPK
Sbjct: 109  SVQPPTGLQEWLKMFQSWSGPEKLLALDELIDSCEPTQVKHMMQVIEPQFQRDFISLLPK 168

Query: 1259 ELALYVLSFLEPKDLLQAAQTCRYWRILAEDNLLWREKCKEEGIDEPLHIKRRKVIKPGF 1438
            ELALYVLSFLEPKDLLQAAQTCRYWRILAEDNLLWREKCKEEGIDEPLHIKRRKVIKPGF
Sbjct: 169  ELALYVLSFLEPKDLLQAAQTCRYWRILAEDNLLWREKCKEEGIDEPLHIKRRKVIKPGF 228

Query: 1439 IHSPWKSAYIRQHRIDTNWRRGELKSPKVLKGHDDHVITCLQFCGNRIVSGSDDNTLKVW 1618
            IHSPWKSAYIRQHRIDTNWRRGELKSPKVLKGHDDHVITCLQFCGNRIVSGSDDNTLKVW
Sbjct: 229  IHSPWKSAYIRQHRIDTNWRRGELKSPKVLKGHDDHVITCLQFCGNRIVSGSDDNTLKVW 288

Query: 1619 SAVTGKCLRTLVGHTGGVWSSQMRDNIIISGSTDRTLRVWNAETGECIHTLYGHTSTVRC 1798
            SAVTGKCLRTLVGHTGGVWSSQMRDNIIISGSTDRTL+VWNAETGECIHTLYGHTSTVRC
Sbjct: 289  SAVTGKCLRTLVGHTGGVWSSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRC 348

Query: 1799 MHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVW 1978
            MHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVW
Sbjct: 349  MHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVW 408

Query: 1979 DPETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSG 2158
            DPETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSG
Sbjct: 409  DPETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSG 468

Query: 2159 MELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTV 2338
            MELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTV
Sbjct: 469  MELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTV 528

Query: 2339 KLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEEAKLLVLDFDVDM 2518
            KLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEE KLLVLDFDVDM
Sbjct: 529  KLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLDFDVDM 588

Query: 2519 K 2521
            K
Sbjct: 589  K 589


>ref|NP_036432.2| F-box and WD-40 domain protein 1B isoform C [Homo sapiens]
          Length = 542

 Score =  242 bits (617), Expect = 1e-63
 Identities = 140/445 (31%), Positives = 229/445 (51%), Gaps = 32/445 (7%)
 Frame = +2

Query: 1112 LKMFQSWSGPEKLLALDELIDSCEPTQVKHMMQVIAPQFQRDFISLLPKE----LALYVL 1279
            +K F  WS  +++  ++ LI      Q  H+   + P  QRDFI+ LP++    +A  +L
Sbjct: 77   IKYFDQWSESDQVEFVEHLISRMCHYQHGHINSYLKPMLQRDFITALPEQGLDHIAENIL 136

Query: 1280 SFLEPKDLLQAAQTCRYWRILAEDNLLWREKCKEEGIDEPLH-------------IKRRK 1420
            S+L+ + L  A   C+ W+ +  + +LW++  +     +PL               K R 
Sbjct: 137  SYLDARSLCAAELVCKEWQRVISEGMLWKKLIERMVRTDPLWKGLSERRGWDQYLFKNRP 196

Query: 1421 VIKP--GFIHSPWKSAYIRQHRIDTNWRRGELKSPKV-LKGHDDHVITCLQFCGNRIVSG 1591
               P   F  S +         I++NWR G     ++  +  +   + CLQ+   +I+SG
Sbjct: 197  TDGPPNSFYRSLYPKIIQDIETIESNWRCGRHNLQRIQCRSENSKGVYCLQYDDEKIISG 256

Query: 1592 SDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDNIIISGSTDRTLRVWNAETGECIHTL 1771
              DN++K+W   + +CL+ L GHTG V   Q  + +I++GS+D T+RVW+  TGE ++TL
Sbjct: 257  LRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYDERVIVTGSSDSTVRVWDVNTGEVLNTL 316

Query: 1772 YGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCL---HVLMGHVAAVRCVQYDGRRV 1942
              H   V  +      +V+ S+D ++ VWD+ +   +    VL+GH AAV  V +D + +
Sbjct: 317  IHHNEAVLHLRFSNGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDFDDKYI 376

Query: 1943 VSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCI 2122
            VS + D  +KVW   T   + TL GH   +  LQ+    VVSGS D +IR+WD+E G C+
Sbjct: 377  VSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACL 436

Query: 2123 HTLTGHQSLTSGMELKDNILVSGNADSTVKIWDIKTG---------QCLQTLQGPNKHQS 2275
              L GH+ L   +   +  +VSG  D  +K+WD++            CL+TL    +H  
Sbjct: 437  RVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLV---EHSG 493

Query: 2276 AVTCLQFNKNFVITSSDDGTVKLWD 2350
             V  LQF++  +I+SS D T+ +WD
Sbjct: 494  RVFRLQFDEFQIISSSHDDTILIWD 518



 Score = 68.2 bits (165), Expect = 3e-11
 Identities = 28/75 (37%), Positives = 49/75 (65%)
 Frame = +2

Query: 2159 MELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTV 2338
            ++  D  ++SG  D+++KIWD  + +CL+ L G   H  +V CLQ+++  ++T S D TV
Sbjct: 246  LQYDDEKIISGLRDNSIKIWDKTSLECLKVLTG---HTGSVLCLQYDERVIVTGSSDSTV 302

Query: 2339 KLWDLKTGEFIRNLV 2383
            ++WD+ TGE +  L+
Sbjct: 303  RVWDVNTGEVLNTLI 317


>ref|NP_387449.2| F-box and WD-40 domain protein 1B isoform A [Homo sapiens]
          Length = 508

 Score =  242 bits (617), Expect = 1e-63
 Identities = 140/445 (31%), Positives = 229/445 (51%), Gaps = 32/445 (7%)
 Frame = +2

Query: 1112 LKMFQSWSGPEKLLALDELIDSCEPTQVKHMMQVIAPQFQRDFISLLPKE----LALYVL 1279
            +K F  WS  +++  ++ LI      Q  H+   + P  QRDFI+ LP++    +A  +L
Sbjct: 43   IKYFDQWSESDQVEFVEHLISRMCHYQHGHINSYLKPMLQRDFITALPEQGLDHIAENIL 102

Query: 1280 SFLEPKDLLQAAQTCRYWRILAEDNLLWREKCKEEGIDEPLH-------------IKRRK 1420
            S+L+ + L  A   C+ W+ +  + +LW++  +     +PL               K R 
Sbjct: 103  SYLDARSLCAAELVCKEWQRVISEGMLWKKLIERMVRTDPLWKGLSERRGWDQYLFKNRP 162

Query: 1421 VIKP--GFIHSPWKSAYIRQHRIDTNWRRGELKSPKV-LKGHDDHVITCLQFCGNRIVSG 1591
               P   F  S +         I++NWR G     ++  +  +   + CLQ+   +I+SG
Sbjct: 163  TDGPPNSFYRSLYPKIIQDIETIESNWRCGRHNLQRIQCRSENSKGVYCLQYDDEKIISG 222

Query: 1592 SDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDNIIISGSTDRTLRVWNAETGECIHTL 1771
              DN++K+W   + +CL+ L GHTG V   Q  + +I++GS+D T+RVW+  TGE ++TL
Sbjct: 223  LRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYDERVIVTGSSDSTVRVWDVNTGEVLNTL 282

Query: 1772 YGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCL---HVLMGHVAAVRCVQYDGRRV 1942
              H   V  +      +V+ S+D ++ VWD+ +   +    VL+GH AAV  V +D + +
Sbjct: 283  IHHNEAVLHLRFSNGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDFDDKYI 342

Query: 1943 VSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCI 2122
            VS + D  +KVW   T   + TL GH   +  LQ+    VVSGS D +IR+WD+E G C+
Sbjct: 343  VSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACL 402

Query: 2123 HTLTGHQSLTSGMELKDNILVSGNADSTVKIWDIKTG---------QCLQTLQGPNKHQS 2275
              L GH+ L   +   +  +VSG  D  +K+WD++            CL+TL    +H  
Sbjct: 403  RVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLV---EHSG 459

Query: 2276 AVTCLQFNKNFVITSSDDGTVKLWD 2350
             V  LQF++  +I+SS D T+ +WD
Sbjct: 460  RVFRLQFDEFQIISSSHDDTILIWD 484



 Score = 68.2 bits (165), Expect = 3e-11
 Identities = 28/75 (37%), Positives = 49/75 (65%)
 Frame = +2

Query: 2159 MELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTV 2338
            ++  D  ++SG  D+++KIWD  + +CL+ L G   H  +V CLQ+++  ++T S D TV
Sbjct: 212  LQYDDEKIISGLRDNSIKIWDKTSLECLKVLTG---HTGSVLCLQYDERVIVTGSSDSTV 268

Query: 2339 KLWDLKTGEFIRNLV 2383
            ++WD+ TGE +  L+
Sbjct: 269  RVWDVNTGEVLNTLI 283


>ref|NP_387448.2| F-box and WD-40 domain protein 1B isoform B [Homo sapiens]
          Length = 529

 Score =  242 bits (617), Expect = 1e-63
 Identities = 140/445 (31%), Positives = 229/445 (51%), Gaps = 32/445 (7%)
 Frame = +2

Query: 1112 LKMFQSWSGPEKLLALDELIDSCEPTQVKHMMQVIAPQFQRDFISLLPKE----LALYVL 1279
            +K F  WS  +++  ++ LI      Q  H+   + P  QRDFI+ LP++    +A  +L
Sbjct: 64   IKYFDQWSESDQVEFVEHLISRMCHYQHGHINSYLKPMLQRDFITALPEQGLDHIAENIL 123

Query: 1280 SFLEPKDLLQAAQTCRYWRILAEDNLLWREKCKEEGIDEPLH-------------IKRRK 1420
            S+L+ + L  A   C+ W+ +  + +LW++  +     +PL               K R 
Sbjct: 124  SYLDARSLCAAELVCKEWQRVISEGMLWKKLIERMVRTDPLWKGLSERRGWDQYLFKNRP 183

Query: 1421 VIKP--GFIHSPWKSAYIRQHRIDTNWRRGELKSPKV-LKGHDDHVITCLQFCGNRIVSG 1591
               P   F  S +         I++NWR G     ++  +  +   + CLQ+   +I+SG
Sbjct: 184  TDGPPNSFYRSLYPKIIQDIETIESNWRCGRHNLQRIQCRSENSKGVYCLQYDDEKIISG 243

Query: 1592 SDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDNIIISGSTDRTLRVWNAETGECIHTL 1771
              DN++K+W   + +CL+ L GHTG V   Q  + +I++GS+D T+RVW+  TGE ++TL
Sbjct: 244  LRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYDERVIVTGSSDSTVRVWDVNTGEVLNTL 303

Query: 1772 YGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCL---HVLMGHVAAVRCVQYDGRRV 1942
              H   V  +      +V+ S+D ++ VWD+ +   +    VL+GH AAV  V +D + +
Sbjct: 304  IHHNEAVLHLRFSNGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDFDDKYI 363

Query: 1943 VSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCI 2122
            VS + D  +KVW   T   + TL GH   +  LQ+    VVSGS D +IR+WD+E G C+
Sbjct: 364  VSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACL 423

Query: 2123 HTLTGHQSLTSGMELKDNILVSGNADSTVKIWDIKTG---------QCLQTLQGPNKHQS 2275
              L GH+ L   +   +  +VSG  D  +K+WD++            CL+TL    +H  
Sbjct: 424  RVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLV---EHSG 480

Query: 2276 AVTCLQFNKNFVITSSDDGTVKLWD 2350
             V  LQF++  +I+SS D T+ +WD
Sbjct: 481  RVFRLQFDEFQIISSSHDDTILIWD 505



 Score = 68.2 bits (165), Expect = 3e-11
 Identities = 28/75 (37%), Positives = 49/75 (65%)
 Frame = +2

Query: 2159 MELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTV 2338
            ++  D  ++SG  D+++KIWD  + +CL+ L G   H  +V CLQ+++  ++T S D TV
Sbjct: 233  LQYDDEKIISGLRDNSIKIWDKTSLECLKVLTG---HTGSVLCLQYDERVIVTGSSDSTV 289

Query: 2339 KLWDLKTGEFIRNLV 2383
            ++WD+ TGE +  L+
Sbjct: 290  RVWDVNTGEVLNTLI 304


>ref|NP_378663.1| beta-transducin repeat containing protein isoform 1 [Homo sapiens]
          Length = 605

 Score =  237 bits (605), Expect = 3e-62
 Identities = 146/447 (32%), Positives = 230/447 (51%), Gaps = 34/447 (7%)
 Frame = +2

Query: 1112 LKMFQSWSGPEKLLALDELIDSCEPTQVKHMMQVIAPQFQRDFISLLPKE----LALYVL 1279
            +K F+ WS  +++  ++ LI      Q  H+   + P  QRDFI+ LP      +A  +L
Sbjct: 138  VKYFEQWSESDQVEFVEHLISQMCHYQHGHINSYLKPMLQRDFITALPARGLDHIAENIL 197

Query: 1280 SFLEPKDLLQAAQTCRYWRILAEDNLLWREKCKEEGIDEPLH---IKRRK------VIKP 1432
            S+L+ K L  A   C+ W  +  D +LW++  +     + L     +RR         KP
Sbjct: 198  SYLDAKSLCAAELVCKEWYRVTSDGMLWKKLIERMVRTDSLWRGLAERRGWGQYLFKNKP 257

Query: 1433 GFIHSPWKSAYIRQH--------RIDTNWRRGELKSPKV-LKGHDDHVITCLQFCGNRIV 1585
               ++P  S Y   +         I++NWR G     ++  +      + CLQ+   +IV
Sbjct: 258  PDGNAPPNSFYRALYPKIIQDIETIESNWRCGRHSLQRIHCRSETSKGVYCLQYDDQKIV 317

Query: 1586 SGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDNIIISGSTDRTLRVWNAETGECIH 1765
            SG  DNT+K+W   T +C R L GHTG V   Q  + +II+GS+D T+RVW+  TGE ++
Sbjct: 318  SGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQYDERVIITGSSDSTVRVWDVNTGEMLN 377

Query: 1766 TLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCL---HVLMGHVAAVRCVQYDGR 1936
            TL  H   V  +  +   +V+ S+D ++ VWD+ +   +    VL+GH AAV  V +D +
Sbjct: 378  TLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDK 437

Query: 1937 RVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGN 2116
             +VS + D  +KVW+  T   + TL GH   +  LQ+    VVSGS D +IR+WD+E G 
Sbjct: 438  YIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGA 497

Query: 2117 CIHTLTGHQSLTSGMELKDNILVSGNADSTVKIWDIKTG---------QCLQTLQGPNKH 2269
            C+  L GH+ L   +   +  +VSG  D  +K+WD+             CL+TL    +H
Sbjct: 498  CLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLV---EH 554

Query: 2270 QSAVTCLQFNKNFVITSSDDGTVKLWD 2350
               V  LQF++  +++SS D T+ +WD
Sbjct: 555  SGRVFRLQFDEFQIVSSSHDDTILIWD 581



 Score =  154 bits (388), Expect = 5e-37
 Identities = 86/260 (33%), Positives = 141/260 (54%), Gaps = 3/260 (1%)
 Frame = +2

Query: 1760 IHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRR 1939
            IH     +  V C+   ++++VSG RD T+++WD  T +C  +L GH  +V C+QYD R 
Sbjct: 296  IHCRSETSKGVYCLQYDDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQYDERV 355

Query: 1940 VVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNC 2119
            +++G+ D  V+VWD  T   L+TL  H   V  L+F+   +V+ S D SI VWD+ +   
Sbjct: 356  IITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTD 415

Query: 2120 I---HTLTGHQSLTSGMELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCL 2290
            I     L GH++  + ++  D  +VS + D T+K+W+  T + ++TL G   H+  + CL
Sbjct: 416  ITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLNG---HKRGIACL 472

Query: 2291 QFNKNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRN 2470
            Q+    V++ S D T++LWD++ G  +R L      G   +V  IR  N ++V      +
Sbjct: 473  QYRDRLVVSGSSDNTIRLWDIECGACLRVL-----EGHEELVRCIRFDNKRIV------S 521

Query: 2471 GTEEAKLLVLDFDVDMK*RA 2530
            G  + K+ V D    +  RA
Sbjct: 522  GAYDGKIKVWDLVAALDPRA 541


>ref|NP_003930.1| beta-transducin repeat containing protein isoform 2 [Homo sapiens]
          Length = 569

 Score =  237 bits (605), Expect = 3e-62
 Identities = 146/447 (32%), Positives = 230/447 (51%), Gaps = 34/447 (7%)
 Frame = +2

Query: 1112 LKMFQSWSGPEKLLALDELIDSCEPTQVKHMMQVIAPQFQRDFISLLPKE----LALYVL 1279
            +K F+ WS  +++  ++ LI      Q  H+   + P  QRDFI+ LP      +A  +L
Sbjct: 102  VKYFEQWSESDQVEFVEHLISQMCHYQHGHINSYLKPMLQRDFITALPARGLDHIAENIL 161

Query: 1280 SFLEPKDLLQAAQTCRYWRILAEDNLLWREKCKEEGIDEPLH---IKRRK------VIKP 1432
            S+L+ K L  A   C+ W  +  D +LW++  +     + L     +RR         KP
Sbjct: 162  SYLDAKSLCAAELVCKEWYRVTSDGMLWKKLIERMVRTDSLWRGLAERRGWGQYLFKNKP 221

Query: 1433 GFIHSPWKSAYIRQH--------RIDTNWRRGELKSPKV-LKGHDDHVITCLQFCGNRIV 1585
               ++P  S Y   +         I++NWR G     ++  +      + CLQ+   +IV
Sbjct: 222  PDGNAPPNSFYRALYPKIIQDIETIESNWRCGRHSLQRIHCRSETSKGVYCLQYDDQKIV 281

Query: 1586 SGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDNIIISGSTDRTLRVWNAETGECIH 1765
            SG  DNT+K+W   T +C R L GHTG V   Q  + +II+GS+D T+RVW+  TGE ++
Sbjct: 282  SGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQYDERVIITGSSDSTVRVWDVNTGEMLN 341

Query: 1766 TLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCL---HVLMGHVAAVRCVQYDGR 1936
            TL  H   V  +  +   +V+ S+D ++ VWD+ +   +    VL+GH AAV  V +D +
Sbjct: 342  TLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDK 401

Query: 1937 RVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGN 2116
             +VS + D  +KVW+  T   + TL GH   +  LQ+    VVSGS D +IR+WD+E G 
Sbjct: 402  YIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGA 461

Query: 2117 CIHTLTGHQSLTSGMELKDNILVSGNADSTVKIWDIKTG---------QCLQTLQGPNKH 2269
            C+  L GH+ L   +   +  +VSG  D  +K+WD+             CL+TL    +H
Sbjct: 462  CLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLV---EH 518

Query: 2270 QSAVTCLQFNKNFVITSSDDGTVKLWD 2350
               V  LQF++  +++SS D T+ +WD
Sbjct: 519  SGRVFRLQFDEFQIVSSSHDDTILIWD 545



 Score =  154 bits (388), Expect = 5e-37
 Identities = 86/260 (33%), Positives = 141/260 (54%), Gaps = 3/260 (1%)
 Frame = +2

Query: 1760 IHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRR 1939
            IH     +  V C+   ++++VSG RD T+++WD  T +C  +L GH  +V C+QYD R 
Sbjct: 260  IHCRSETSKGVYCLQYDDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQYDERV 319

Query: 1940 VVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNC 2119
            +++G+ D  V+VWD  T   L+TL  H   V  L+F+   +V+ S D SI VWD+ +   
Sbjct: 320  IITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTD 379

Query: 2120 I---HTLTGHQSLTSGMELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCL 2290
            I     L GH++  + ++  D  +VS + D T+K+W+  T + ++TL G   H+  + CL
Sbjct: 380  ITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLNG---HKRGIACL 436

Query: 2291 QFNKNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRN 2470
            Q+    V++ S D T++LWD++ G  +R L      G   +V  IR  N ++V      +
Sbjct: 437  QYRDRLVVSGSSDNTIRLWDIECGACLRVL-----EGHEELVRCIRFDNKRIV------S 485

Query: 2471 GTEEAKLLVLDFDVDMK*RA 2530
            G  + K+ V D    +  RA
Sbjct: 486  GAYDGKIKVWDLVAALDPRA 505


>ref|NP_849143.1| hypothetical protein LOC164781 [Homo sapiens]
          Length = 415

 Score =  182 bits (463), Expect = 1e-45
 Identities = 99/301 (32%), Positives = 172/301 (57%), Gaps = 14/301 (4%)
 Frame = +2

Query: 1520 KVLKGHDDHVIT-CLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRD- 1693
            KVLK H   +    L   G+  ++GS D T K+W   +G+ L TL GH   V++    + 
Sbjct: 86   KVLKAHILPLTNVALNKSGSCFITGSYDRTCKLWDTASGEELNTLEGHRNVVYAIAFNNP 145

Query: 1694 --NIIISGSTDRTLRVWNAETGECIHTLYGHTSTVRCMHLHEKR--VVSGSRDATLRVWD 1861
              + I +GS D+T ++W+ ETG+C HT  GHT+ + C+  + +   V +GS D T ++WD
Sbjct: 146  YGDKIATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWD 205

Query: 1862 IETGQCLHVLMGHVAAVRCVQYD--GRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVY 2035
            I+ G+ ++ L GH A +  + ++  G R+++G++D  V VWD +T   ++ L GH   + 
Sbjct: 206  IQNGEEVYTLRGHSAEIISLSFNTSGDRIITGSFDHTVVVWDADTGRKVNILIGHCAEIS 265

Query: 2036 SLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGH--QSLTSGMELKDNILVSGNADS 2203
            S  F  D   +++GS+D + ++WD   G C+ TLTGH  + L S  +    ++ + +AD 
Sbjct: 266  SASFNWDCSLILTGSMDKTCKLWDATNGKCVATLTGHDDEILDSCFDYTGKLIATASADG 325

Query: 2204 TVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNK--NFVITSSDDGTVKLWDLKTGEFIRN 2377
            T +I+   T +C+  L+G   H+  ++ + FN   N ++T S D T ++WD +TG+ ++ 
Sbjct: 326  TARIFSAATRKCIAKLEG---HEGEISKISFNPQGNHLLTGSSDKTARIWDAQTGQCLQV 382

Query: 2378 L 2380
            L
Sbjct: 383  L 383



 Score =  175 bits (444), Expect = 2e-43
 Identities = 100/300 (33%), Positives = 163/300 (54%), Gaps = 15/300 (5%)
 Frame = +2

Query: 1493 WRRGELKSPKVLKGHDDHVITCLQF---CGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHT 1663
            W     +    L+GH + V+  + F    G++I +GS D T K+WS  TGKC  T  GHT
Sbjct: 119  WDTASGEELNTLEGHRN-VVYAIAFNNPYGDKIATGSFDKTCKLWSVETGKCYHTFRGHT 177

Query: 1664 GGV--WSSQMRDNIIISGSTDRTLRVWNAETGECIHTLYGHTSTVRCMHLHEK--RVVSG 1831
              +   S   +  ++ +GS D T ++W+ + GE ++TL GH++ +  +  +    R+++G
Sbjct: 178  AEIVCLSFNPQSTLVATGSMDTTAKLWDIQNGEEVYTLRGHSAEIISLSFNTSGDRIITG 237

Query: 1832 SRDATLRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLH 2005
            S D T+ VWD +TG+ +++L+GH A +    +  D   +++G+ D   K+WD     C+ 
Sbjct: 238  SFDHTVVVWDADTGRKVNILIGHCAEISSASFNWDCSLILTGSMDKTCKLWDATNGKCVA 297

Query: 2006 TLQGHTNRVYSLQFD--GIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMEL--KD 2173
            TL GH + +    FD  G  + + S D + R++   T  CI  L GH+   S +    + 
Sbjct: 298  TLTGHDDEILDSCFDYTGKLIATASADGTARIFSAATRKCIAKLEGHEGEISKISFNPQG 357

Query: 2174 NILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFN--KNFVITSSDDGTVKLW 2347
            N L++G++D T +IWD +TGQCLQ L+G   H   +    FN   N VIT S D T ++W
Sbjct: 358  NHLLTGSSDKTARIWDAQTGQCLQVLEG---HTDEIFSCAFNYKGNIVITGSKDNTCRIW 414



 Score =  108 bits (269), Expect = 3e-23
 Identities = 60/175 (34%), Positives = 98/175 (56%), Gaps = 9/175 (5%)
 Frame = +2

Query: 1886 VLMGHVAAVRCVQYD--GRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFD--- 2050
            VL  H+  +  V  +  G   ++G+YD   K+WD  +   L+TL+GH N VY++ F+   
Sbjct: 87   VLKAHILPLTNVALNKSGSCFITGSYDRTCKLWDTASGEELNTLEGHRNVVYAIAFNNPY 146

Query: 2051 GIHVVSGSLDTSIRVWDVETGNCIHTLTGHQS--LTSGMELKDNILVSGNADSTVKIWDI 2224
            G  + +GS D + ++W VETG C HT  GH +  +      +  ++ +G+ D+T K+WDI
Sbjct: 147  GDKIATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDI 206

Query: 2225 KTGQCLQTLQGPNKHQSAVTCLQFNKNF--VITSSDDGTVKLWDLKTGEFIRNLV 2383
            + G+ + TL+G   H + +  L FN +   +IT S D TV +WD  TG  +  L+
Sbjct: 207  QNGEEVYTLRG---HSAEIISLSFNTSGDRIITGSFDHTVVVWDADTGRKVNILI 258


>ref|NP_438172.1| WD repeat domain 5 [Homo sapiens]
          Length = 334

 Score =  168 bits (426), Expect = 2e-41
 Identities = 97/284 (34%), Positives = 162/284 (57%), Gaps = 25/284 (8%)
 Frame = +2

Query: 1571 GNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGV----WSSQMRDNIIISGSTDRTLRVW 1738
            G  + S S D  +K+W A  GK  +T+ GH  G+    WSS    N+++S S D+TL++W
Sbjct: 57   GEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSD--SNLLVSASDDKTLKIW 114

Query: 1739 NAETGECIHTLYGHTSTVRCMHLHEKR--VVSGSRDATLRVWDIETGQCLHVLMGHVAAV 1912
            +  +G+C+ TL GH++ V C + + +   +VSGS D ++R+WD++TG+CL  L  H   V
Sbjct: 115  DVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPV 174

Query: 1913 RCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYS-LQF--DGIHVVSGSL 2077
              V +  DG  +VS +YD + ++WD  +  CL TL    N   S ++F  +G ++++ +L
Sbjct: 175  SAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATL 234

Query: 2078 DTSIRVWDVETGNCIHTLTGHQ----------SLTSGMELKDNILVSGNADSTVKIWDIK 2227
            D ++++WD   G C+ T TGH+          S+T G       +VSG+ D+ V IW+++
Sbjct: 235  DNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGG-----KWIVSGSEDNLVYIWNLQ 289

Query: 2228 TGQCLQTLQGPNKHQSAV--TCLQFNKNFVITSS--DDGTVKLW 2347
            T + +Q LQG   H   V  T     +N + +++  +D T+KLW
Sbjct: 290  TKEIVQKLQG---HTDVVISTACHPTENIIASAALENDKTIKLW 330



 Score =  144 bits (363), Expect = 4e-34
 Identities = 84/259 (32%), Positives = 135/259 (52%), Gaps = 17/259 (6%)
 Frame = +2

Query: 1493 WRRGELKSPKVLKGHDDHVI-TCLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGG 1669
            W   + K  K + GH   +         N +VS SDD TLK+W   +GKCL+TL GH+  
Sbjct: 72   WGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNY 131

Query: 1670 VWSSQM--RDNIIISGSTDRTLRVWNAETGECIHTLYGHTSTVRCMHLHE--KRVVSGSR 1837
            V+      + N+I+SGS D ++R+W+ +TG+C+ TL  H+  V  +H +     +VS S 
Sbjct: 132  VFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSY 191

Query: 1838 DATLRVWDIETGQCLHVLM-GHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHT 2008
            D   R+WD  +GQCL  L+      V  V++  +G+ +++   D  +K+WD     CL T
Sbjct: 192  DGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKT 251

Query: 2009 LQGHTNRVYSLQFD-----GIHVVSGSLDTSIRVWDVETGNCIHTLTGHQS--LTSGMEL 2167
              GH N  Y +  +     G  +VSGS D  + +W+++T   +  L GH    +++    
Sbjct: 252  YTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHP 311

Query: 2168 KDNILVSG--NADSTVKIW 2218
             +NI+ S     D T+K+W
Sbjct: 312  TENIIASAALENDKTIKLW 330



 Score =  144 bits (362), Expect = 5e-34
 Identities = 84/261 (32%), Positives = 141/261 (54%), Gaps = 16/261 (6%)
 Frame = +2

Query: 1646 TLVGHTGGVWSSQMRDN--IIISGSTDRTLRVWNAETGECIHTLYGHTSTVR--CMHLHE 1813
            TL GHT  V S +   N   + S S D+ +++W A  G+   T+ GH   +         
Sbjct: 40   TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 99

Query: 1814 KRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRR--VVSGAYDFMVKVWDPE 1987
              +VS S D TL++WD+ +G+CL  L GH   V C  ++ +   +VSG++D  V++WD +
Sbjct: 100  NLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVK 159

Query: 1988 TETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSL-TSG 2158
            T  CL TL  H++ V ++ F  DG  +VS S D   R+WD  +G C+ TL    +   S 
Sbjct: 160  TGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSF 219

Query: 2159 MELKDN--ILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKN-----FVIT 2317
            ++   N   +++   D+T+K+WD   G+CL+T  G   H++   C+  N +     ++++
Sbjct: 220  VKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTG---HKNEKYCIFANFSVTGGKWIVS 276

Query: 2318 SSDDGTVKLWDLKTGEFIRNL 2380
             S+D  V +W+L+T E ++ L
Sbjct: 277  GSEDNLVYIWNLQTKEIVQKL 297



 Score =  107 bits (267), Expect = 5e-23
 Identities = 56/173 (32%), Positives = 99/173 (57%), Gaps = 8/173 (4%)
 Frame = +2

Query: 1889 LMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF--DGI 2056
            L GH  AV  V++  +G  + S + D ++K+W         T+ GH   +  + +  D  
Sbjct: 41   LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSN 100

Query: 2057 HVVSGSLDTSIRVWDVETGNCIHTLTGHQSLT--SGMELKDNILVSGNADSTVKIWDIKT 2230
             +VS S D ++++WDV +G C+ TL GH +         + N++VSG+ D +V+IWD+KT
Sbjct: 101  LLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKT 160

Query: 2231 GQCLQTLQGPNKHQSAVTCLQFNK--NFVITSSDDGTVKLWDLKTGEFIRNLV 2383
            G+CL+TL     H   V+ + FN+  + +++SS DG  ++WD  +G+ ++ L+
Sbjct: 161  GKCLKTLPA---HSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLI 210


  Database: RefSeqHP
    Posted date:  Aug 2, 2006 12:57 AM
  Number of letters in database: 17,774,539
  Number of sequences in database:  39,411
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 98,269,051
Number of Sequences: 39411
Number of extensions: 2597800
Number of successful extensions: 12800
Number of sequences better than 1.0e-05: 10
Number of HSP's better than  0.0 without gapping: 7106
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10327
length of database: 17,774,539
effective HSP length: 111
effective length of database: 13,399,918
effective search space used: 10197337598
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

Search to RefSeqSP

BLASTX 2.2.10 [Oct-19-2004]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= PBL01_0074_B12
         (2620 letters)

Database: RefSeqSP 
           1040 sequences; 434,620 total letters

Searching...done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_999415.1| platelet-activating factor acetylhydrolase Ib-a...   160   1e-40
Alignment   gi|NP_999497.1| G-beta like protein [Sus scrofa]                      82   5e-17
Alignment   gi|NP_001012296.1| fizzy/cell division cycle 20 related 1 [Sus ...    67   2e-12

>ref|NP_999415.1| platelet-activating factor acetylhydrolase Ib-alpha subunit [Sus
            scrofa]
          Length = 410

 Score =  160 bits (406), Expect = 1e-40
 Identities = 97/291 (33%), Positives = 153/291 (52%), Gaps = 32/291 (10%)
 Frame = +2

Query: 1580 IVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVW--SSQMRDNIIISGSTDRTLRVWNAETG 1753
            +VS S+D T+KVW   TG   RTL GHT  V   S      ++ S S D T+++W+ +  
Sbjct: 123  MVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGF 182

Query: 1754 ECIHTLYGHTSTVRCMHL--HEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQ- 1924
            ECI T++GH   V  + +  +   +VS +RD T+++W+++TG C+    GH   VR V+ 
Sbjct: 183  ECIRTMHGHDHNVSSVAIMPNGDHIVSAARDKTIKMWEVQTGYCVKTFTGHREWVRMVRP 242

Query: 1925 -YDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF------------------ 2047
              DG  + S + D  V+VW   T+ C   L+ H + V  + +                  
Sbjct: 243  NQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETK 302

Query: 2048 ----DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKD--NILVSGNADSTV 2209
                 G  ++SGS D +I++WDV TG C+ TL GH +   G+        ++S   D T+
Sbjct: 303  KSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTL 362

Query: 2210 KIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKN--FVITSSDDGTVKLWDLK 2356
            ++WD K  +C++TL   N H+  VT L F+K   +V+T S D TVK+W+ +
Sbjct: 363  RVWDYKNKRCMKTL---NAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410



 Score =  134 bits (338), Expect = 8e-33
 Identities = 82/267 (30%), Positives = 130/267 (48%), Gaps = 31/267 (11%)
 Frame = +2

Query: 1520 KVLKGHDDHVITC-LQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDN 1696
            + LKGH D V        G  + S S D T+K+W     +C+RT+ GH   V S  +  N
Sbjct: 144  RTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPN 203

Query: 1697 --IIISGSTDRTLRVWNAETGECIHTLYGHTSTVRCMHLHE--KRVVSGSRDATLRVWDI 1864
               I+S + D+T+++W  +TG C+ T  GH   VR +  ++    + S S D T+RVW +
Sbjct: 204  GDHIVSAARDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVV 263

Query: 1865 ETGQCLHVLMGHVAAVRCVQY----------------------DGRRVVSGAYDFMVKVW 1978
             T +C   L  H   V C+ +                       G  ++SG+ D  +K+W
Sbjct: 264  ATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMW 323

Query: 1979 DPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLT 2152
            D  T  CL TL GH N V  + F   G  ++S + D ++RVWD +   C+ TL  H+   
Sbjct: 324  DVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFV 383

Query: 2153 SGMELKDN--ILVSGNADSTVKIWDIK 2227
            + ++       +V+G+ D TVK+W+ +
Sbjct: 384  TSLDFHKTAPYVVTGSVDQTVKVWECR 410



 Score =  134 bits (336), Expect = 1e-32
 Identities = 83/260 (31%), Positives = 136/260 (52%), Gaps = 31/260 (11%)
 Frame = +2

Query: 1694 NIIISGSTDRTLRVWNAETGECIHTLYGHTSTVRCMHLHE--KRVVSGSRDATLRVWDIE 1867
            ++++S S D T++VW+ ETG+   TL GHT +V+ +      K + S S D T+++WD +
Sbjct: 121  SVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQ 180

Query: 1868 TGQCLHVLMGH---VAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTN--RV 2032
              +C+  + GH   V++V  +  +G  +VS A D  +K+W+ +T  C+ T  GH    R+
Sbjct: 181  GFECIRTMHGHDHNVSSV-AIMPNGDHIVSAARDKTIKMWEVQTGYCVKTFTGHREWVRM 239

Query: 2033 YSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQ-----------------SLTSGM 2161
                 DG  + S S D ++RVW V T  C   L  H+                 S  +G 
Sbjct: 240  VRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGS 299

Query: 2162 ELKDN-----ILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNK--NFVITS 2320
            E K +      L+SG+ D T+K+WD+ TG CL TL G   H + V  + F+    F+++ 
Sbjct: 300  ETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVG---HDNWVRGVLFHSGGKFILSC 356

Query: 2321 SDDGTVKLWDLKTGEFIRNL 2380
            +DD T+++WD K    ++ L
Sbjct: 357  ADDKTLRVWDYKNKRCMKTL 376



 Score =  124 bits (312), Expect = 8e-30
 Identities = 72/237 (30%), Positives = 122/237 (51%), Gaps = 30/237 (12%)
 Frame = +2

Query: 1763 HTLYGHTSTVRCMHLHE--KRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYD-- 1930
            + L GH S V  +  H     +VS S DAT++VWD ETG     L GH  +V+ + +D  
Sbjct: 102  YALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHS 161

Query: 1931 GRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDV 2104
            G+ + S + D  +K+WD +   C+ T+ GH + V S+    +G H+VS + D +I++W+V
Sbjct: 162  GKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSAARDKTIKMWEV 221

Query: 2105 ETGNCIHTLTGHQSLTSGMELKDN--ILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSA 2278
            +TG C+ T TGH+     +    +  ++ S + D TV++W + T +C   L+   +H+  
Sbjct: 222  QTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELR---EHEHV 278

Query: 2279 VTCLQFNKN----------------------FVITSSDDGTVKLWDLKTGEFIRNLV 2383
            V C+ +                         F+++ S D T+K+WD+ TG  +  LV
Sbjct: 279  VECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLV 335


>ref|NP_999497.1| G-beta like protein [Sus scrofa]
          Length = 317

 Score = 82.4 bits (202), Expect = 5e-17
 Identities = 72/263 (27%), Positives = 113/263 (42%), Gaps = 25/263 (9%)
 Frame = +2

Query: 1520 KVLKGHDDHVI-TCLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGV----WSSQ 1684
            + L+GH   V    +   G   +SGS D TL++W   TG   R  VGHT  V    +SS 
Sbjct: 57   RALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSD 116

Query: 1685 MRDNIIISGSTDRTLRVWNAETGECIHTLY--GHTSTVRCMHLHEKR----VVSGSRDAT 1846
             R   I+SGS D+T+++WN   G C +T+    H+  V C+          +VS   D  
Sbjct: 117  NRQ--IVSGSRDKTIKLWNT-LGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKL 173

Query: 1847 LRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQGH 2020
            ++VW++   +     +GH   +  V    DG    SG  D    +WD      L+TL G 
Sbjct: 174  VKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDG- 232

Query: 2021 TNRVYSLQFD-GIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTS-----------GME 2164
             + + +L F    + +  +   SI++WD+E    +  L      TS              
Sbjct: 233  GDIINALCFSPNRYWLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWS 292

Query: 2165 LKDNILVSGNADSTVKIWDIKTG 2233
                 L +G  D+ V++W +  G
Sbjct: 293  ADGQTLFAGYTDNLVRVWQVTIG 315



 Score = 49.7 bits (117), Expect = 3e-07
 Identities = 39/133 (29%), Positives = 64/133 (48%), Gaps = 11/133 (8%)
 Frame = +2

Query: 1985 ETETCLHTLQGHTNRVYSL----QFDGIHVVSGSLDTSIRVWDV---ETGNCI--HTLTG 2137
            E  T   TL+GH   V  +    QF  + ++S S D +I +W +   ET   I    L G
Sbjct: 3    EQMTLRGTLKGHNGWVTQIATTPQFPDM-ILSASRDKTIIMWKLTRDETNYGIPQRALRG 61

Query: 2138 HQSLTSGMELKDN--ILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFV 2311
            H    S + +  +    +SG+ D T+++WD+ TG   +   G  K   +V     N+  +
Sbjct: 62   HSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQ-I 120

Query: 2312 ITSSDDGTVKLWD 2350
            ++ S D T+KLW+
Sbjct: 121  VSGSRDKTIKLWN 133


>ref|NP_001012296.1| fizzy/cell division cycle 20 related 1 [Sus scrofa]
          Length = 493

 Score = 67.4 bits (163), Expect = 2e-12
 Identities = 74/315 (23%), Positives = 136/315 (43%), Gaps = 18/315 (5%)
 Frame = +2

Query: 1538 DDHVITCLQFCGNRIVSGSDDNTLKVWSAVTGKCLR----TLVGH--TGGVWSSQMRDNI 1699
            DD  +  + +    ++S      + +WSA T +  R    ++ G   T   WS   R N+
Sbjct: 186  DDFYLNLVDWSSLNVLSVGLGTCVYLWSACTSQVTRLCDLSVEGDSVTSVGWSE--RGNL 243

Query: 1700 IISGSTDRTLRVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETG-- 1873
            +  G+    +++W+A  G+ +  L GHT+ V  +  +  ++ SGSRD  +   DI T   
Sbjct: 244  VAVGTHKGFVQIWDAAAGKKLSMLEGHTARVGALAWNADQLSSGSRDRMILQRDIRTPPL 303

Query: 1874 QCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSL-- 2041
            Q    L GH   V  +++  D + + SG  D  + VW+  + + +     H   V ++  
Sbjct: 304  QSERRLQGHRQEVCGLKWSTDHQLLASGGNDNKLLVWNHSSLSPVQQYTEHLAAVKAIAW 363

Query: 2042 ---QFDGIHVVSGSLDTSIRVWDVETGNCIHTL-TGHQSLTSGMELKDNILVS--GNADS 2203
               Q   +    G+ D  IR W+  TG  +  + TG Q          N LVS  G + +
Sbjct: 364  SPHQHGLLASGGGTADRCIRFWNTLTGQPLQCIDTGSQVCNLAWSKHANELVSTHGYSQN 423

Query: 2204 TVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLWDLKTGEFIRNLV 2383
             + +W   +   +  L G + ++     +  +   ++T + D T++ W++    F +   
Sbjct: 424  QILVWKYPSLTQVAKLTG-HSYRVLYLAMSPDGEAIVTGAGDETLRFWNV----FSKTRS 478

Query: 2384 TLESGGSGGVVWRIR 2428
            T ES     +  RIR
Sbjct: 479  TKESVSVLNLFTRIR 493


  Database: RefSeqSP
    Posted date:  Aug 1, 2006  7:14 PM
  Number of letters in database: 434,620
  Number of sequences in database:  1040
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,334,823
Number of Sequences: 1040
Number of extensions: 59282
Number of successful extensions: 256
Number of sequences better than 1.0e-05: 3
Number of HSP's better than  0.0 without gapping: 160
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 192
length of database: 434,620
effective HSP length: 85
effective length of database: 346,220
effective search space used: 272475140
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

Search to RefSeqMP

BLASTX 2.2.10 [Oct-19-2004]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= PBL01_0074_B12
         (2620 letters)

Database: RefSeqMP 
           45,328 sequences; 21,768,885 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_536353.2| F-box and WD-40 domain protein 7, archipelago h...  1090   0.0  
Alignment   gi|NP_598776.1| F-box and WD-40 domain protein 11 [Mus musculus]     241   2e-63
Alignment   gi|NP_033901.1| beta-transducin repeat containing protein isofo...   236   7e-62
Alignment   gi|NP_001032847.1| beta-transducin repeat containing protein is...   236   7e-62
Alignment   gi|NP_543124.1| WD repeat domain 5 [Mus musculus]                    168   2e-41
Alignment   gi|NP_038653.1| platelet-activating factor acetylhydrolase, iso...   162   2e-39
Alignment   gi|NP_081389.1| WD repeat domain 5B [Mus musculus]                   158   2e-38
Alignment   gi|XP_987745.1| PREDICTED: similar to platelet-activating facto...   150   9e-36
Alignment   gi|NP_722487.1| Tnf receptor-associated factor 7 [Mus musculus]      135   2e-31
Alignment   gi|NP_081630.1| WD repeat domain 51A [Mus musculus]                  132   2e-30

>ref|NP_536353.2| F-box and WD-40 domain protein 7, archipelago homolog [Mus musculus]
          Length = 629

 Score = 1090 bits (2819), Expect = 0.0
 Identities = 527/541 (97%), Positives = 531/541 (98%)
 Frame = +2

Query: 899  KMKRKLDHGSEVRSFSLGKKPCKVSEYTSTTGLVPCSATPTTFGDLRAANXXXXXXXXIT 1078
            KMKRKLDHGSEVRSFSLGKKPCKVS+YTSTTGLVPCSATPTTFGDLRAAN        IT
Sbjct: 89   KMKRKLDHGSEVRSFSLGKKPCKVSDYTSTTGLVPCSATPTTFGDLRAANGQGQQRRRIT 148

Query: 1079 SVQPPTGLQEWLKMFQSWSGPEKLLALDELIDSCEPTQVKHMMQVIAPQFQRDFISLLPK 1258
            SVQPPTGLQEWLKMFQSWSGPEKLLALDELIDSCEPTQVKHMMQVI PQFQRDFISLLPK
Sbjct: 149  SVQPPTGLQEWLKMFQSWSGPEKLLALDELIDSCEPTQVKHMMQVIEPQFQRDFISLLPK 208

Query: 1259 ELALYVLSFLEPKDLLQAAQTCRYWRILAEDNLLWREKCKEEGIDEPLHIKRRKVIKPGF 1438
            ELALYVLSFLEPKDLLQAAQTCRYWRILAEDNLLWREKCKEEGIDEPLHIKRRK+IKPGF
Sbjct: 209  ELALYVLSFLEPKDLLQAAQTCRYWRILAEDNLLWREKCKEEGIDEPLHIKRRKIIKPGF 268

Query: 1439 IHSPWKSAYIRQHRIDTNWRRGELKSPKVLKGHDDHVITCLQFCGNRIVSGSDDNTLKVW 1618
            IHSPWKSAYIRQHRIDTNWRRGELKSPKVLKGHDDHVITCLQFCGNRIVSGSDDNTLKVW
Sbjct: 269  IHSPWKSAYIRQHRIDTNWRRGELKSPKVLKGHDDHVITCLQFCGNRIVSGSDDNTLKVW 328

Query: 1619 SAVTGKCLRTLVGHTGGVWSSQMRDNIIISGSTDRTLRVWNAETGECIHTLYGHTSTVRC 1798
            SAVTGKCLRTLVGHTGGVWSSQMRDNIIISGSTDRTL+VWNAETGECIHTLYGHTSTVRC
Sbjct: 329  SAVTGKCLRTLVGHTGGVWSSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRC 388

Query: 1799 MHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVW 1978
            MHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVW
Sbjct: 389  MHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVW 448

Query: 1979 DPETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSG 2158
            DPETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSG
Sbjct: 449  DPETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSG 508

Query: 2159 MELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTV 2338
            MELKDNILVSGNADSTVKIWDIKTGQCLQTLQGP+KHQSAVTCLQFNKNFVITSSDDGTV
Sbjct: 509  MELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPSKHQSAVTCLQFNKNFVITSSDDGTV 568

Query: 2339 KLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEEAKLLVLDFDVDM 2518
            KLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEE KLLVLDFDVDM
Sbjct: 569  KLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLDFDVDM 628

Query: 2519 K 2521
            K
Sbjct: 629  K 629


>ref|NP_598776.1| F-box and WD-40 domain protein 11 [Mus musculus]
          Length = 563

 Score =  241 bits (616), Expect = 2e-63
 Identities = 140/445 (31%), Positives = 230/445 (51%), Gaps = 32/445 (7%)
 Frame = +2

Query: 1112 LKMFQSWSGPEKLLALDELIDSCEPTQVKHMMQVIAPQFQRDFISLLPKE----LALYVL 1279
            +K F  WS  +++  ++ LI      Q  H+   + P  QRDFI+ LP++    +A  +L
Sbjct: 98   IKYFDQWSESDQVEFVEHLISRMCHYQHGHINSYLKPMLQRDFITALPEQGLDHIAENIL 157

Query: 1280 SFLEPKDLLQAAQTCRYWRILAEDNLLWREKCKEEGIDEPLH-------------IKRRK 1420
            S+L+ + L  A   C+ W+ +  + +LW++  +     +PL               K R 
Sbjct: 158  SYLDARSLCAAELVCKEWQRVISEGMLWKKLIERMVRTDPLWKGLSERRGWDQYLFKNRP 217

Query: 1421 VIKP--GFIHSPWKSAYIRQHRIDTNWRRGELKSPKV-LKGHDDHVITCLQFCGNRIVSG 1591
               P   F  S +         I++NWR G     ++  +  +   + CLQ+  ++I+SG
Sbjct: 218  TDGPPNSFYRSLYPKIIQDIETIESNWRCGRHNLQRIQCRSENSKGVYCLQYDDDKIISG 277

Query: 1592 SDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDNIIISGSTDRTLRVWNAETGECIHTL 1771
              DN++K+W   + +CL+ L GHTG V   Q  + +I++GS+D T+RVW+  TGE ++TL
Sbjct: 278  LRDNSIKIWDKSSLECLKVLTGHTGSVLCLQYDERVIVTGSSDSTVRVWDVNTGEVLNTL 337

Query: 1772 YGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCL---HVLMGHVAAVRCVQYDGRRV 1942
              H   V  +      +V+ S+D ++ VWD+ +   +    VL+GH AAV  V +D + +
Sbjct: 338  IHHNEAVLHLRFSNGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDFDDKYI 397

Query: 1943 VSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCI 2122
            VS + D  +KVW   T   + TL GH   +  LQ+    VVSGS D +IR+WD+E G C+
Sbjct: 398  VSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACL 457

Query: 2123 HTLTGHQSLTSGMELKDNILVSGNADSTVKIWDIKTG---------QCLQTLQGPNKHQS 2275
              L GH+ L   +   +  +VSG  D  +K+WD++            CL+TL    +H  
Sbjct: 458  RVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLV---EHSG 514

Query: 2276 AVTCLQFNKNFVITSSDDGTVKLWD 2350
             V  LQF++  +I+SS D T+ +WD
Sbjct: 515  RVFRLQFDEFQIISSSHDDTILIWD 539



 Score = 68.9 bits (167), Expect = 2e-11
 Identities = 28/75 (37%), Positives = 50/75 (66%)
 Frame = +2

Query: 2159 MELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTV 2338
            ++  D+ ++SG  D+++KIWD  + +CL+ L G   H  +V CLQ+++  ++T S D TV
Sbjct: 267  LQYDDDKIISGLRDNSIKIWDKSSLECLKVLTG---HTGSVLCLQYDERVIVTGSSDSTV 323

Query: 2339 KLWDLKTGEFIRNLV 2383
            ++WD+ TGE +  L+
Sbjct: 324  RVWDVNTGEVLNTLI 338


>ref|NP_033901.1| beta-transducin repeat containing protein isoform b [Mus musculus]
          Length = 569

 Score =  236 bits (603), Expect = 7e-62
 Identities = 145/447 (32%), Positives = 229/447 (51%), Gaps = 34/447 (7%)
 Frame = +2

Query: 1112 LKMFQSWSGPEKLLALDELIDSCEPTQVKHMMQVIAPQFQRDFISLLPKE----LALYVL 1279
            +K F+ WS  +++  ++ LI      Q  H+   + P  QRDFI+ LP      +A  +L
Sbjct: 102  VKYFEQWSESDQVEFVEHLISQMCHYQHGHINSYLKPMLQRDFITALPARGLDHIAENIL 161

Query: 1280 SFLEPKDLLQAAQTCRYWRILAEDNLLWREKCKEEGIDEPLH---IKRRK------VIKP 1432
            S+L+ K L  A   C+ W  +  D +LW++  +     + L     +RR         KP
Sbjct: 162  SYLDAKSLCAAELVCKEWYRVTSDGMLWKKLIERMVRTDSLWRGLAERRGWGQYLFKNKP 221

Query: 1433 GFIHSPWKSAYIRQH--------RIDTNWRRGELKSPKV-LKGHDDHVITCLQFCGNRIV 1585
               ++P  S Y   +         I++NWR G     ++  +      + CLQ+   +IV
Sbjct: 222  PDENAPPNSFYRALYPKIIQDIETIESNWRCGRHSLQRIHCRSETSKGVYCLQYDDQKIV 281

Query: 1586 SGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDNIIISGSTDRTLRVWNAETGECIH 1765
            SG  DNT+K+W   T +C R L GHTG V   Q  + +II+GS+D T+RVW+   GE ++
Sbjct: 282  SGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQYDERVIITGSSDSTVRVWDVNAGEMLN 341

Query: 1766 TLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCL---HVLMGHVAAVRCVQYDGR 1936
            TL  H   V  +  +   +V+ S+D ++ VWD+ +   +    VL+GH AAV  V +D +
Sbjct: 342  TLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDK 401

Query: 1937 RVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGN 2116
             +VS + D  +KVW+  T   + TL GH   +  LQ+    VVSGS D +IR+WD+E G 
Sbjct: 402  YIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGA 461

Query: 2117 CIHTLTGHQSLTSGMELKDNILVSGNADSTVKIWDIKTG---------QCLQTLQGPNKH 2269
            C+  L GH+ L   +   +  +VSG  D  +K+WD+             CL+TL    +H
Sbjct: 462  CLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLMAALDPRAPAGTLCLRTLV---EH 518

Query: 2270 QSAVTCLQFNKNFVITSSDDGTVKLWD 2350
               V  LQF++  +++SS D T+ +WD
Sbjct: 519  SGRVFRLQFDEFQIVSSSHDDTILIWD 545



 Score =  152 bits (383), Expect = 2e-36
 Identities = 85/260 (32%), Positives = 140/260 (53%), Gaps = 3/260 (1%)
 Frame = +2

Query: 1760 IHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRR 1939
            IH     +  V C+   ++++VSG RD T+++WD  T +C  +L GH  +V C+QYD R 
Sbjct: 260  IHCRSETSKGVYCLQYDDQKIVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQYDERV 319

Query: 1940 VVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNC 2119
            +++G+ D  V+VWD      L+TL  H   V  L+F+   +V+ S D SI VWD+ +   
Sbjct: 320  IITGSSDSTVRVWDVNAGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTD 379

Query: 2120 I---HTLTGHQSLTSGMELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCL 2290
            I     L GH++  + ++  D  +VS + D T+K+W+  T + ++TL G   H+  + CL
Sbjct: 380  ITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLNG---HKRGIACL 436

Query: 2291 QFNKNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRN 2470
            Q+    V++ S D T++LWD++ G  +R L      G   +V  IR  N ++V      +
Sbjct: 437  QYRDRLVVSGSSDNTIRLWDIECGACLRVL-----EGHEELVRCIRFDNKRIV------S 485

Query: 2471 GTEEAKLLVLDFDVDMK*RA 2530
            G  + K+ V D    +  RA
Sbjct: 486  GAYDGKIKVWDLMAALDPRA 505



 Score =  122 bits (305), Expect = 2e-27
 Identities = 62/171 (36%), Positives = 94/171 (54%), Gaps = 9/171 (5%)
 Frame = +2

Query: 1520 KVLKGHDDHVITCLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDNI 1699
            +VL GH    +  + F    IVS S D T+KVW+  T + +RTL GH  G+   Q RD +
Sbjct: 384  RVLVGHRA-AVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYRDRL 442

Query: 1700 IISGSTDRTLRVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQ- 1876
            ++SGS+D T+R+W+ E G C+  L GH   VRC+    KR+VSG+ D  ++VWD+     
Sbjct: 443  VVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLMAALD 502

Query: 1877 --------CLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLH 2005
                    CL  L+ H   V  +Q+D  ++VS ++D  + +WD   +   H
Sbjct: 503  PRAPAGTLCLRTLVEHSGRVFRLQFDEFQIVSSSHDDTILIWDFLNDPAAH 553


>ref|NP_001032847.1| beta-transducin repeat containing protein isoform a [Mus musculus]
          Length = 605

 Score =  236 bits (603), Expect = 7e-62
 Identities = 145/447 (32%), Positives = 229/447 (51%), Gaps = 34/447 (7%)
 Frame = +2

Query: 1112 LKMFQSWSGPEKLLALDELIDSCEPTQVKHMMQVIAPQFQRDFISLLPKE----LALYVL 1279
            +K F+ WS  +++  ++ LI      Q  H+   + P  QRDFI+ LP      +A  +L
Sbjct: 138  VKYFEQWSESDQVEFVEHLISQMCHYQHGHINSYLKPMLQRDFITALPARGLDHIAENIL 197

Query: 1280 SFLEPKDLLQAAQTCRYWRILAEDNLLWREKCKEEGIDEPLH---IKRRK------VIKP 1432
            S+L+ K L  A   C+ W  +  D +LW++  +     + L     +RR         KP
Sbjct: 198  SYLDAKSLCAAELVCKEWYRVTSDGMLWKKLIERMVRTDSLWRGLAERRGWGQYLFKNKP 257

Query: 1433 GFIHSPWKSAYIRQH--------RIDTNWRRGELKSPKV-LKGHDDHVITCLQFCGNRIV 1585
               ++P  S Y   +         I++NWR G     ++  +      + CLQ+   +IV
Sbjct: 258  PDENAPPNSFYRALYPKIIQDIETIESNWRCGRHSLQRIRCRSETSKGVYCLQYDDQKIV 317

Query: 1586 SGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDNIIISGSTDRTLRVWNAETGECIH 1765
            SG  DNT+K+W   T +C R L GHTG V   Q  + +II+GS+D T+RVW+   GE ++
Sbjct: 318  SGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQYDERVIITGSSDSTVRVWDVNAGEMLN 377

Query: 1766 TLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCL---HVLMGHVAAVRCVQYDGR 1936
            TL  H   V  +  +   +V+ S+D ++ VWD+ +   +    VL+GH AAV  V +D +
Sbjct: 378  TLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDK 437

Query: 1937 RVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGN 2116
             +VS + D  +KVW+  T   + TL GH   +  LQ+    VVSGS D +IR+WD+E G 
Sbjct: 438  YIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGA 497

Query: 2117 CIHTLTGHQSLTSGMELKDNILVSGNADSTVKIWDIKTG---------QCLQTLQGPNKH 2269
            C+  L GH+ L   +   +  +VSG  D  +K+WD+             CL+TL    +H
Sbjct: 498  CLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLMAALDPRAPAGTLCLRTLV---EH 554

Query: 2270 QSAVTCLQFNKNFVITSSDDGTVKLWD 2350
               V  LQF++  +++SS D T+ +WD
Sbjct: 555  SGRVFRLQFDEFQIVSSSHDDTILIWD 581



 Score =  151 bits (381), Expect = 4e-36
 Identities = 83/250 (33%), Positives = 137/250 (54%), Gaps = 3/250 (1%)
 Frame = +2

Query: 1790 VRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMV 1969
            V C+   ++++VSG RD T+++WD  T +C  +L GH  +V C+QYD R +++G+ D  V
Sbjct: 306  VYCLQYDDQKIVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQYDERVIITGSSDSTV 365

Query: 1970 KVWDPETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCI---HTLTGH 2140
            +VWD      L+TL  H   V  L+F+   +V+ S D SI VWD+ +   I     L GH
Sbjct: 366  RVWDVNAGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGH 425

Query: 2141 QSLTSGMELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITS 2320
            ++  + ++  D  +VS + D T+K+W+  T + ++TL G   H+  + CLQ+    V++ 
Sbjct: 426  RAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLNG---HKRGIACLQYRDRLVVSG 482

Query: 2321 SDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEEAKLLVL 2500
            S D T++LWD++ G  +R L      G   +V  IR  N ++V      +G  + K+ V 
Sbjct: 483  SSDNTIRLWDIECGACLRVL-----EGHEELVRCIRFDNKRIV------SGAYDGKIKVW 531

Query: 2501 DFDVDMK*RA 2530
            D    +  RA
Sbjct: 532  DLMAALDPRA 541



 Score =  122 bits (305), Expect = 2e-27
 Identities = 62/171 (36%), Positives = 94/171 (54%), Gaps = 9/171 (5%)
 Frame = +2

Query: 1520 KVLKGHDDHVITCLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDNI 1699
            +VL GH    +  + F    IVS S D T+KVW+  T + +RTL GH  G+   Q RD +
Sbjct: 420  RVLVGHRA-AVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYRDRL 478

Query: 1700 IISGSTDRTLRVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQ- 1876
            ++SGS+D T+R+W+ E G C+  L GH   VRC+    KR+VSG+ D  ++VWD+     
Sbjct: 479  VVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLMAALD 538

Query: 1877 --------CLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLH 2005
                    CL  L+ H   V  +Q+D  ++VS ++D  + +WD   +   H
Sbjct: 539  PRAPAGTLCLRTLVEHSGRVFRLQFDEFQIVSSSHDDTILIWDFLNDPAAH 589


>ref|NP_543124.1| WD repeat domain 5 [Mus musculus]
          Length = 334

 Score =  168 bits (426), Expect = 2e-41
 Identities = 97/284 (34%), Positives = 162/284 (57%), Gaps = 25/284 (8%)
 Frame = +2

Query: 1571 GNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGV----WSSQMRDNIIISGSTDRTLRVW 1738
            G  + S S D  +K+W A  GK  +T+ GH  G+    WSS    N+++S S D+TL++W
Sbjct: 57   GEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSD--SNLLVSASDDKTLKIW 114

Query: 1739 NAETGECIHTLYGHTSTVRCMHLHEKR--VVSGSRDATLRVWDIETGQCLHVLMGHVAAV 1912
            +  +G+C+ TL GH++ V C + + +   +VSGS D ++R+WD++TG+CL  L  H   V
Sbjct: 115  DVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPV 174

Query: 1913 RCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYS-LQF--DGIHVVSGSL 2077
              V +  DG  +VS +YD + ++WD  +  CL TL    N   S ++F  +G ++++ +L
Sbjct: 175  SAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATL 234

Query: 2078 DTSIRVWDVETGNCIHTLTGHQ----------SLTSGMELKDNILVSGNADSTVKIWDIK 2227
            D ++++WD   G C+ T TGH+          S+T G       +VSG+ D+ V IW+++
Sbjct: 235  DNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGG-----KWIVSGSEDNLVYIWNLQ 289

Query: 2228 TGQCLQTLQGPNKHQSAV--TCLQFNKNFVITSS--DDGTVKLW 2347
            T + +Q LQG   H   V  T     +N + +++  +D T+KLW
Sbjct: 290  TKEIVQKLQG---HTDVVISTACHPTENIIASAALENDKTIKLW 330



 Score =  144 bits (363), Expect = 5e-34
 Identities = 84/259 (32%), Positives = 135/259 (52%), Gaps = 17/259 (6%)
 Frame = +2

Query: 1493 WRRGELKSPKVLKGHDDHVI-TCLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGG 1669
            W   + K  K + GH   +         N +VS SDD TLK+W   +GKCL+TL GH+  
Sbjct: 72   WGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNY 131

Query: 1670 VWSSQM--RDNIIISGSTDRTLRVWNAETGECIHTLYGHTSTVRCMHLHE--KRVVSGSR 1837
            V+      + N+I+SGS D ++R+W+ +TG+C+ TL  H+  V  +H +     +VS S 
Sbjct: 132  VFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSY 191

Query: 1838 DATLRVWDIETGQCLHVLM-GHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHT 2008
            D   R+WD  +GQCL  L+      V  V++  +G+ +++   D  +K+WD     CL T
Sbjct: 192  DGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKT 251

Query: 2009 LQGHTNRVYSLQFD-----GIHVVSGSLDTSIRVWDVETGNCIHTLTGHQS--LTSGMEL 2167
              GH N  Y +  +     G  +VSGS D  + +W+++T   +  L GH    +++    
Sbjct: 252  YTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHP 311

Query: 2168 KDNILVSG--NADSTVKIW 2218
             +NI+ S     D T+K+W
Sbjct: 312  TENIIASAALENDKTIKLW 330



 Score =  144 bits (362), Expect = 6e-34
 Identities = 84/261 (32%), Positives = 141/261 (54%), Gaps = 16/261 (6%)
 Frame = +2

Query: 1646 TLVGHTGGVWSSQMRDN--IIISGSTDRTLRVWNAETGECIHTLYGHTSTVR--CMHLHE 1813
            TL GHT  V S +   N   + S S D+ +++W A  G+   T+ GH   +         
Sbjct: 40   TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 99

Query: 1814 KRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRR--VVSGAYDFMVKVWDPE 1987
              +VS S D TL++WD+ +G+CL  L GH   V C  ++ +   +VSG++D  V++WD +
Sbjct: 100  NLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVK 159

Query: 1988 TETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSL-TSG 2158
            T  CL TL  H++ V ++ F  DG  +VS S D   R+WD  +G C+ TL    +   S 
Sbjct: 160  TGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSF 219

Query: 2159 MELKDN--ILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKN-----FVIT 2317
            ++   N   +++   D+T+K+WD   G+CL+T  G   H++   C+  N +     ++++
Sbjct: 220  VKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTG---HKNEKYCIFANFSVTGGKWIVS 276

Query: 2318 SSDDGTVKLWDLKTGEFIRNL 2380
             S+D  V +W+L+T E ++ L
Sbjct: 277  GSEDNLVYIWNLQTKEIVQKL 297



 Score =  107 bits (267), Expect = 6e-23
 Identities = 56/173 (32%), Positives = 99/173 (57%), Gaps = 8/173 (4%)
 Frame = +2

Query: 1889 LMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF--DGI 2056
            L GH  AV  V++  +G  + S + D ++K+W         T+ GH   +  + +  D  
Sbjct: 41   LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSN 100

Query: 2057 HVVSGSLDTSIRVWDVETGNCIHTLTGHQSLT--SGMELKDNILVSGNADSTVKIWDIKT 2230
             +VS S D ++++WDV +G C+ TL GH +         + N++VSG+ D +V+IWD+KT
Sbjct: 101  LLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKT 160

Query: 2231 GQCLQTLQGPNKHQSAVTCLQFNK--NFVITSSDDGTVKLWDLKTGEFIRNLV 2383
            G+CL+TL     H   V+ + FN+  + +++SS DG  ++WD  +G+ ++ L+
Sbjct: 161  GKCLKTLPA---HSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLI 210


>ref|NP_038653.1| platelet-activating factor acetylhydrolase, isoform 1b, beta1 subunit
            [Mus musculus]
          Length = 410

 Score =  162 bits (409), Expect = 2e-39
 Identities = 98/291 (33%), Positives = 153/291 (52%), Gaps = 32/291 (10%)
 Frame = +2

Query: 1580 IVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVW--SSQMRDNIIISGSTDRTLRVWNAETG 1753
            +VS S+D T+KVW   TG   RTL GHT  V   S      ++ S S D T+++W+ +  
Sbjct: 123  MVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGF 182

Query: 1754 ECIHTLYGHTSTVRCMHL--HEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQ- 1924
            ECI T++GH   V  + +  +   +VS SRD T+++W+++TG C+    GH   VR V+ 
Sbjct: 183  ECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRP 242

Query: 1925 -YDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF------------------ 2047
              DG  + S + D  V+VW   T+ C   L+ H + V  + +                  
Sbjct: 243  NQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETK 302

Query: 2048 ----DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKD--NILVSGNADSTV 2209
                 G  ++SGS D +I++WDV TG C+ TL GH +   G+        ++S   D T+
Sbjct: 303  KSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTL 362

Query: 2210 KIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKN--FVITSSDDGTVKLWDLK 2356
            ++WD K  +C++TL   N H+  VT L F+K   +V+T S D TVK+W+ +
Sbjct: 363  RVWDYKNKRCMKTL---NAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410



 Score =  135 bits (341), Expect = 2e-31
 Identities = 83/267 (31%), Positives = 130/267 (48%), Gaps = 31/267 (11%)
 Frame = +2

Query: 1520 KVLKGHDDHVITC-LQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDN 1696
            + LKGH D V        G  + S S D T+K+W     +C+RT+ GH   V S  +  N
Sbjct: 144  RTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPN 203

Query: 1697 --IIISGSTDRTLRVWNAETGECIHTLYGHTSTVRCMHLHE--KRVVSGSRDATLRVWDI 1864
               I+S S D+T+++W  +TG C+ T  GH   VR +  ++    + S S D T+RVW +
Sbjct: 204  GDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVV 263

Query: 1865 ETGQCLHVLMGHVAAVRCVQY----------------------DGRRVVSGAYDFMVKVW 1978
             T +C   L  H   V C+ +                       G  ++SG+ D  +K+W
Sbjct: 264  ATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMW 323

Query: 1979 DPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLT 2152
            D  T  CL TL GH N V  + F   G  ++S + D ++RVWD +   C+ TL  H+   
Sbjct: 324  DVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFV 383

Query: 2153 SGMELKDN--ILVSGNADSTVKIWDIK 2227
            + ++       +V+G+ D TVK+W+ +
Sbjct: 384  TSLDFHKTAPYVVTGSVDQTVKVWECR 410



 Score =  132 bits (333), Expect = 1e-30
 Identities = 82/260 (31%), Positives = 136/260 (52%), Gaps = 31/260 (11%)
 Frame = +2

Query: 1694 NIIISGSTDRTLRVWNAETGECIHTLYGHTSTVRCMHLHE--KRVVSGSRDATLRVWDIE 1867
            ++++S S D T++VW+ ETG+   TL GHT +V+ +      K + S S D T+++WD +
Sbjct: 121  SVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQ 180

Query: 1868 TGQCLHVLMGH---VAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTN--RV 2032
              +C+  + GH   V++V  +  +G  +VS + D  +K+W+ +T  C+ T  GH    R+
Sbjct: 181  GFECIRTMHGHDHNVSSV-AIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRM 239

Query: 2033 YSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQ-----------------SLTSGM 2161
                 DG  + S S D ++RVW V T  C   L  H+                 S  +G 
Sbjct: 240  VRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGS 299

Query: 2162 ELKDN-----ILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNK--NFVITS 2320
            E K +      L+SG+ D T+K+WD+ TG CL TL G   H + V  + F+    F+++ 
Sbjct: 300  ETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVG---HDNWVRGVLFHSGGKFILSC 356

Query: 2321 SDDGTVKLWDLKTGEFIRNL 2380
            +DD T+++WD K    ++ L
Sbjct: 357  ADDKTLRVWDYKNKRCMKTL 376



 Score =  125 bits (315), Expect = 2e-28
 Identities = 73/237 (30%), Positives = 122/237 (51%), Gaps = 30/237 (12%)
 Frame = +2

Query: 1763 HTLYGHTSTVRCMHLHE--KRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYD-- 1930
            + L GH S V  +  H     +VS S DAT++VWD ETG     L GH  +V+ + +D  
Sbjct: 102  YALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHS 161

Query: 1931 GRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDV 2104
            G+ + S + D  +K+WD +   C+ T+ GH + V S+    +G H+VS S D +I++W+V
Sbjct: 162  GKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEV 221

Query: 2105 ETGNCIHTLTGHQSLTSGMELKDN--ILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSA 2278
            +TG C+ T TGH+     +    +  ++ S + D TV++W + T +C   L+   +H+  
Sbjct: 222  QTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELR---EHEHV 278

Query: 2279 VTCLQFNKN----------------------FVITSSDDGTVKLWDLKTGEFIRNLV 2383
            V C+ +                         F+++ S D T+K+WD+ TG  +  LV
Sbjct: 279  VECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLV 335


>ref|NP_081389.1| WD repeat domain 5B [Mus musculus]
          Length = 328

 Score =  158 bits (400), Expect = 2e-38
 Identities = 92/294 (31%), Positives = 165/294 (56%), Gaps = 20/294 (6%)
 Frame = +2

Query: 1526 LKGHDDHVITCLQFC--GNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGV----WSSQM 1687
            L GH    I+ ++F   G  + S + D  + +W A  G C +TL GH+  +    WSS  
Sbjct: 35   LAGHSA-AISSVKFSPNGEWLASSAADALIIIWGAYDGNCKKTLYGHSLEISDVAWSSD- 92

Query: 1688 RDNIIISGSTDRTLRVWNAETGECIHTLYGHTSTVRCMHLH--EKRVVSGSRDATLRVWD 1861
              + ++S S D+TL+VW+  +G+C+ TL GH+  V C   +     +VSGS D ++++W+
Sbjct: 93   -SSRLVSASDDKTLKVWDMRSGKCLKTLKGHSDFVFCCDFNPPSNLIVSGSFDESVKIWE 151

Query: 1862 IETGQCLHVLMGHVAAVRCVQYD--GRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVY 2035
            ++TG+CL  L  H   +  V ++  G  +VSG+YD + ++WD  +  CL TL    N   
Sbjct: 152  VKTGKCLKTLSAHSDPISAVNFNCNGSLIVSGSYDGLCRIWDAASGQCLRTLADEGNPPV 211

Query: 2036 S-LQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNI-----LVSG 2191
            S ++F  +G ++++ +LD ++++WD   G C+ T TGH++    +    ++     +VSG
Sbjct: 212  SFVKFSPNGKYILTATLDNTLKLWDYSRGRCLKTYTGHKNEKYCLFASFSVTGRKWVVSG 271

Query: 2192 NADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSS--DDGTVKLW 2347
            + D+ V IW+++T + +Q LQG      +  C    KN + +++  +D T+K+W
Sbjct: 272  SEDNMVYIWNLQTKEIVQRLQGHTDVVISAAC-HPTKNIIASAALENDKTIKVW 324



 Score =  151 bits (381), Expect = 4e-36
 Identities = 86/261 (32%), Positives = 141/261 (54%), Gaps = 16/261 (6%)
 Frame = +2

Query: 1646 TLVGHTGGVWSSQMRDN--IIISGSTDRTLRVWNAETGECIHTLYGHTSTVR--CMHLHE 1813
            TL GH+  + S +   N   + S + D  + +W A  G C  TLYGH+  +         
Sbjct: 34   TLAGHSAAISSVKFSPNGEWLASSAADALIIIWGAYDGNCKKTLYGHSLEISDVAWSSDS 93

Query: 1814 KRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYD--GRRVVSGAYDFMVKVWDPE 1987
             R+VS S D TL+VWD+ +G+CL  L GH   V C  ++     +VSG++D  VK+W+ +
Sbjct: 94   SRLVSASDDKTLKVWDMRSGKCLKTLKGHSDFVFCCDFNPPSNLIVSGSFDESVKIWEVK 153

Query: 1988 TETCLHTLQGHTNRVYSLQFD--GIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSL-TSG 2158
            T  CL TL  H++ + ++ F+  G  +VSGS D   R+WD  +G C+ TL    +   S 
Sbjct: 154  TGKCLKTLSAHSDPISAVNFNCNGSLIVSGSYDGLCRIWDAASGQCLRTLADEGNPPVSF 213

Query: 2159 MELKDN--ILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCL-----QFNKNFVIT 2317
            ++   N   +++   D+T+K+WD   G+CL+T  G   H++   CL        + +V++
Sbjct: 214  VKFSPNGKYILTATLDNTLKLWDYSRGRCLKTYTG---HKNEKYCLFASFSVTGRKWVVS 270

Query: 2318 SSDDGTVKLWDLKTGEFIRNL 2380
             S+D  V +W+L+T E ++ L
Sbjct: 271  GSEDNMVYIWNLQTKEIVQRL 291



 Score =  117 bits (294), Expect = 5e-26
 Identities = 77/218 (35%), Positives = 112/218 (51%), Gaps = 16/218 (7%)
 Frame = +2

Query: 1493 WRRGELKSPKVLKGHDDHVITC-LQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGG 1669
            W     K  K LKGH D V  C      N IVSGS D ++K+W   TGKCL+TL  H+  
Sbjct: 108  WDMRSGKCLKTLKGHSDFVFCCDFNPPSNLIVSGSFDESVKIWEVKTGKCLKTLSAHSDP 167

Query: 1670 VWSSQMRDN--IIISGSTDRTLRVWNAETGECIHTLYGH----TSTVRCMHLHEKRVVSG 1831
            + +     N  +I+SGS D   R+W+A +G+C+ TL        S V+    + K +++ 
Sbjct: 168  ISAVNFNCNGSLIVSGSYDGLCRIWDAASGQCLRTLADEGNPPVSFVK-FSPNGKYILTA 226

Query: 1832 SRDATLRVWDIETGQCLHVLMGHVAAVRCV----QYDGRR-VVSGAYDFMVKVWDPETET 1996
            + D TL++WD   G+CL    GH     C+       GR+ VVSG+ D MV +W+ +T+ 
Sbjct: 227  TLDNTLKLWDYSRGRCLKTYTGHKNEKYCLFASFSVTGRKWVVSGSEDNMVYIWNLQTKE 286

Query: 1997 CLHTLQGHTNRVYSLQFDGIHVVSGSL----DTSIRVW 2098
             +  LQGHT+ V S        +  S     D +I+VW
Sbjct: 287  IVQRLQGHTDVVISAACHPTKNIIASAALENDKTIKVW 324



 Score = 79.7 bits (195), Expect = 1e-14
 Identities = 51/178 (28%), Positives = 81/178 (45%), Gaps = 13/178 (7%)
 Frame = +2

Query: 1493 WRRGELKSPKVLKGHDDHVITCLQFC-GNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGG 1669
            W     K  K L  H D +      C G+ IVSGS D   ++W A +G+CLRTL      
Sbjct: 150  WEVKTGKCLKTLSAHSDPISAVNFNCNGSLIVSGSYDGLCRIWDAASGQCLRTLADEGNP 209

Query: 1670 VWS---SQMRDNIIISGSTDRTLRVWNAETGECIHTLYGHTSTVRCMHLH-----EKRVV 1825
              S          I++ + D TL++W+   G C+ T  GH +   C+         K VV
Sbjct: 210  PVSFVKFSPNGKYILTATLDNTLKLWDYSRGRCLKTYTGHKNEKYCLFASFSVTGRKWVV 269

Query: 1826 SGSRDATLRVWDIETGQCLHVLMGHV-AAVRCVQYDGRRVVSGA---YDFMVKVWDPE 1987
            SGS D  + +W+++T + +  L GH    +    +  + +++ A    D  +KVW  +
Sbjct: 270  SGSEDNMVYIWNLQTKEIVQRLQGHTDVVISAACHPTKNIIASAALENDKTIKVWSSD 327


>ref|XP_987745.1| PREDICTED: similar to platelet-activating factor acetylhydrolase beta
            subunit [Mus musculus]
          Length = 312

 Score =  150 bits (378), Expect = 9e-36
 Identities = 92/280 (32%), Positives = 144/280 (51%), Gaps = 32/280 (11%)
 Frame = +2

Query: 1613 VWSAVTGKCLRTLVGHTGGVW--SSQMRDNIIISGSTDRTLRVWNAETGECIHTLYGHTS 1786
            VW   TG   RTL GHT  V   S      ++ S S D T+++W+ +  ECI T++GH  
Sbjct: 36   VWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDH 95

Query: 1787 TVRCMHL--HEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQ--YDGRRVVSGA 1954
             V  + +  +   +VS SRD T+++W+++TG C+    GH   VR V+   DG  + S +
Sbjct: 96   NVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCS 155

Query: 1955 YDFMVKVWDPETETCLHTLQGHTNRVYSLQF----------------------DGIHVVS 2068
             D  V+VW   T+ C   L+ H + V  + +                       G  ++S
Sbjct: 156  NDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLS 215

Query: 2069 GSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKD--NILVSGNADSTVKIWDIKTGQCL 2242
            GS D +I++WDV TG C+ TL GH +   G+        ++S   D T+++WD K  +C+
Sbjct: 216  GSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCM 275

Query: 2243 QTLQGPNKHQSAVTCLQFNKN--FVITSSDDGTVKLWDLK 2356
            +TL   N H+  VT L F+K   +V+T S D TVK+W+ +
Sbjct: 276  KTL---NAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 312



 Score =  135 bits (341), Expect = 2e-31
 Identities = 83/267 (31%), Positives = 130/267 (48%), Gaps = 31/267 (11%)
 Frame = +2

Query: 1520 KVLKGHDDHVITC-LQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDN 1696
            + LKGH D V        G  + S S D T+K+W     +C+RT+ GH   V S  +  N
Sbjct: 46   RTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPN 105

Query: 1697 --IIISGSTDRTLRVWNAETGECIHTLYGHTSTVRCMHLHE--KRVVSGSRDATLRVWDI 1864
               I+S S D+T+++W  +TG C+ T  GH   VR +  ++    + S S D T+RVW +
Sbjct: 106  GDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVV 165

Query: 1865 ETGQCLHVLMGHVAAVRCVQY----------------------DGRRVVSGAYDFMVKVW 1978
             T +C   L  H   V C+ +                       G  ++SG+ D  +K+W
Sbjct: 166  ATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMW 225

Query: 1979 DPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLT 2152
            D  T  CL TL GH N V  + F   G  ++S + D ++RVWD +   C+ TL  H+   
Sbjct: 226  DVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFV 285

Query: 2153 SGMELKDN--ILVSGNADSTVKIWDIK 2227
            + ++       +V+G+ D TVK+W+ +
Sbjct: 286  TSLDFHKTAPYVVTGSVDQTVKVWECR 312



 Score =  121 bits (304), Expect = 3e-27
 Identities = 78/246 (31%), Positives = 123/246 (50%), Gaps = 30/246 (12%)
 Frame = +2

Query: 1733 VWNAETGECIHTLYGHTSTVRCMHLHE--KRVVSGSRDATLRVWDIETGQCLHVLMGHVA 1906
            VW+ ETG+   TL GHT +V+ +      K + S S D T+++WD +  +C+  + GH  
Sbjct: 36   VWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDH 95

Query: 1907 AVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTN--RVYSLQFDGIHVVSGS 2074
             V  V    +G  +VS + D  +K+W+ +T  C+ T  GH    R+     DG  + S S
Sbjct: 96   NVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCS 155

Query: 2075 LDTSIRVWDVETGNCIHTLTGHQ-----------------SLTSGMELKDN-----ILVS 2188
             D ++RVW V T  C   L  H+                 S  +G E K +      L+S
Sbjct: 156  NDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLS 215

Query: 2189 GNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKN--FVITSSDDGTVKLWDLKTG 2362
            G+ D T+K+WD+ TG CL TL G   H + V  + F+    F+++ +DD T+++WD K  
Sbjct: 216  GSRDKTIKMWDVSTGMCLMTLVG---HDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNK 272

Query: 2363 EFIRNL 2380
              ++ L
Sbjct: 273  RCMKTL 278



 Score =  110 bits (274), Expect = 1e-23
 Identities = 61/205 (29%), Positives = 105/205 (51%), Gaps = 28/205 (13%)
 Frame = +2

Query: 1853 VWDIETGQCLHVLMGHVAAVRCVQYD--GRRVVSGAYDFMVKVWDPETETCLHTLQGHTN 2026
            VWD ETG     L GH  +V+ + +D  G+ + S + D  +K+WD +   C+ T+ GH +
Sbjct: 36   VWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDH 95

Query: 2027 RVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDN--ILVSGN 2194
             V S+    +G H+VS S D +I++W+V+TG C+ T TGH+     +    +  ++ S +
Sbjct: 96   NVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCS 155

Query: 2195 ADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKN----------------------F 2308
             D TV++W + T +C   L+   +H+  V C+ +                         F
Sbjct: 156  NDQTVRVWVVATKECKAELR---EHEHVVECISWAPESSYSSISEATGSETKKSGKPGPF 212

Query: 2309 VITSSDDGTVKLWDLKTGEFIRNLV 2383
            +++ S D T+K+WD+ TG  +  LV
Sbjct: 213  LLSGSRDKTIKMWDVSTGMCLMTLV 237


>ref|NP_722487.1| Tnf receptor-associated factor 7 [Mus musculus]
          Length = 594

 Score =  135 bits (340), Expect = 2e-31
 Identities = 90/281 (32%), Positives = 143/281 (50%), Gaps = 9/281 (3%)
 Frame = +2

Query: 1532 GHDDHV-ITCLQFCGNRIVSGSDDNTLKVW-SAVTGKCLRTLVGHTGGVWSSQMRDNIII 1705
            GH   V   C+   G+ + SGS D T+KVW +  T KC +TL GH G V +  ++   + 
Sbjct: 318  GHQGPVWCLCVYSMGDLLFSGSSDKTIKVWDTCTTYKCQKTLEGHDGIVLALCIQGCKLY 377

Query: 1706 SGSTDRTLRVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLH 1885
            SGS D T+ VW+ +  + ++T+  H + V  +      + SGS  A ++VWDI  G  L 
Sbjct: 378  SGSADCTIIVWDIQNLQKVNTIRAHDNPVCTLVSSHNMLFSGSLKA-IKVWDI-VGTELK 435

Query: 1886 V---LMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGI 2056
            +   L G    VR +      + SG+Y   +K+WD  T  C+H LQ     VYS+     
Sbjct: 436  LKKELTGLNHWVRALVAAQSYLYSGSYQ-TIKIWDIRTLDCIHVLQTSGGSVYSIAVTNH 494

Query: 2057 HVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMEL----KDNILVSGNADSTVKIWDI 2224
            H+V G+ +  I VWD+E+   + TLTGH      + +        + S + D ++++W +
Sbjct: 495  HIVCGTYENLIHVWDIESKEQVRTLTGHVGTVYALAVISTPDQTKVFSASYDRSLRVWSM 554

Query: 2225 KTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLW 2347
                C QTL    +HQ +VT L  ++  + + + D TVK+W
Sbjct: 555  DNMICTQTLL---RHQGSVTALAVSRGRLFSGAVDSTVKVW 592



 Score = 88.2 bits (217), Expect = 4e-17
 Identities = 68/217 (31%), Positives = 103/217 (47%), Gaps = 5/217 (2%)
 Frame = +2

Query: 1874 QCLHVLMGHVAAV--RCVQYDGRRVVSGAYDFMVKVWDP-ETETCLHTLQGHTNRVYSLQ 2044
            +C    +GH   V   CV   G  + SG+ D  +KVWD   T  C  TL+GH   V +L 
Sbjct: 311  KCKGTFVGHQGPVWCLCVYSMGDLLFSGSSDKTIKVWDTCTTYKCQKTLEGHDGIVLALC 370

Query: 2045 FDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNILVSGNADSTVKIWDI 2224
              G  + SGS D +I VWD++    ++T+  H +    +    N+L SG+  + +K+WDI
Sbjct: 371  IQGCKLYSGSADCTIIVWDIQNLQKVNTIRAHDNPVCTLVSSHNMLFSGSLKA-IKVWDI 429

Query: 2225 KTGQCL--QTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLWDLKTGEFIRNLVTLESG 2398
               +    + L G N    A+   Q      + S    T+K+WD++T + I  L T    
Sbjct: 430  VGTELKLKKELTGLNHWVRALVAAQS----YLYSGSYQTIKIWDIRTLDCIHVLQT---- 481

Query: 2399 GSGGVVWRIRASNTKLVCAVGSRNGTEEAKLLVLDFD 2509
             SGG V+ I  +N  +VC      GT E  + V D +
Sbjct: 482  -SGGSVYSIAVTNHHIVC------GTYENLIHVWDIE 511


>ref|NP_081630.1| WD repeat domain 51A [Mus musculus]
          Length = 405

 Score =  132 bits (331), Expect = 2e-30
 Identities = 85/287 (29%), Positives = 138/287 (48%), Gaps = 14/287 (4%)
 Frame = +2

Query: 1529 KGHDDHVITCLQFCGN--RIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDN-- 1696
            KGH D  +TC+ F  N   + SGS D+TL +W   +        GH   V       +  
Sbjct: 16   KGHRD-AVTCVDFSLNTKHLASGSMDSTLMIWHMKSQSRAYRFTGHKDAVTCVNFSPSGH 74

Query: 1697 IIISGSTDRTLRVWNAETGECIHTLYGHTSTVRCMHL--HEKRVVSGSRDATLRVWDIET 1870
            ++ SGS D+T+R+W             HT+TVR +H     + +V+ S D T++VW    
Sbjct: 75   LLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSLVTASDDKTVKVWSTHR 134

Query: 1871 GQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQ 2044
             + L  L  H+  VRC ++  DGR +VS + D  VK+WD  +  C+H+   H   V  + 
Sbjct: 135  QRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECIHSYCEHGGFVTYVD 194

Query: 2045 F--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMEL--KDNILVSGNADSTVK 2212
            F   G  + +  +D +++VWD  T   +     H +  + +      N L++ ++DST+K
Sbjct: 195  FHPSGTCIAAAGMDNTVKVWDARTHRLLQHYQLHSAAVNALSFHPSGNYLITASSDSTLK 254

Query: 2213 IWDIKTGQCLQTLQGPNKHQSAVTCLQFNK--NFVITSSDDGTVKLW 2347
            I D+  G+ L TL G   HQ   T + F++   +  +   D  V +W
Sbjct: 255  ILDLMEGRLLYTLHG---HQGPATTVAFSRTGEYFASGGSDEQVMVW 298



 Score =  124 bits (312), Expect = 4e-28
 Identities = 93/290 (32%), Positives = 141/290 (48%), Gaps = 14/290 (4%)
 Frame = +2

Query: 1700 IISGSTDRTLRVWNAETGECIHTLYGHTSTVRCMHLHEK--RVVSGSRDATLRVWDIETG 1873
            + SGS D TL +W+ ++    +   GH   V C++       + SGSRD T+R+W     
Sbjct: 34   LASGSMDSTLMIWHMKSQSRAYRFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVK 93

Query: 1874 QCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF 2047
                V   H A VR V +  DG+ +V+ + D  VKVW    +  L +L  H N V   +F
Sbjct: 94   GESTVFRAHTATVRSVHFCSDGQSLVTASDDKTVKVWSTHRQRFLFSLTQHINWVRCAKF 153

Query: 2048 --DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMEL--KDNILVSGNADSTVKI 2215
              DG  +VS S D ++++WD  +  CIH+   H    + ++       + +   D+TVK+
Sbjct: 154  SPDGRLIVSASDDKTVKLWDKTSRECIHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKV 213

Query: 2216 WDIKTGQCLQTLQGPNKHQSAVTCLQFNK--NFVITSSDDGTVKLWDLKTGEFIRNLVTL 2389
            WD +T + LQ  Q    H +AV  L F+   N++IT+S D T+K+ DL  G   R L TL
Sbjct: 214  WDARTHRLLQHYQ---LHSAAVNALSFHPSGNYLITASSDSTLKILDLMEG---RLLYTL 267

Query: 2390 ESGGSGGVVWRIRASNTKLVCAVGSRNGTEEAKLLVLDFDV----DMK*R 2527
               G  G    +  S T    A G  +  E+  +   +FD+    DMK R
Sbjct: 268  H--GHQGPATTVAFSRTGEYFASGGSD--EQVMVWKSNFDIVDYGDMKAR 313


  Database: RefSeqMP
    Posted date:  Aug 2, 2006 12:58 AM
  Number of letters in database: 21,768,885
  Number of sequences in database:  45,328
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 117,303,696
Number of Sequences: 45328
Number of extensions: 3054760
Number of successful extensions: 14393
Number of sequences better than 1.0e-05: 10
Number of HSP's better than  0.0 without gapping: 8151
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11872
length of database: 21,768,885
effective HSP length: 112
effective length of database: 16,692,149
effective search space used: 12686033240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)