Search to RefSeqBP
BLASTX 2.2.10 [Oct-19-2004]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TES01_0047_C11
(1142 letters)
Database: RefSeqBP
33,508 sequences; 16,112,626 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001029685.1| carbonyl reductase 1 [Bos taurus] 452 e-127
Alignment gi|XP_874747.1| PREDICTED: similar to Carbonyl reductase [NADPH... 446 e-125
Alignment gi|NP_001030258.1| 20-beta-hydroxysteroid dehydrogenase-like [B... 419 e-117
Alignment gi|XP_869745.1| PREDICTED: similar to carbonyl reductase 3 isof... 399 e-111
Alignment gi|XP_868956.1| PREDICTED: similar to Carbonyl reductase [NADPH... 266 3e-71
Alignment gi|XP_878838.1| PREDICTED: similar to carbonyl reductase 3 isof... 248 5e-66
Alignment gi|XP_594165.2| PREDICTED: similar to carbonyl reductase 3 isof... 248 5e-66
Alignment gi|XP_583859.2| PREDICTED: similar to short chain dehydrogenase... 62 1e-09
Alignment gi|XP_592820.2| PREDICTED: similar to retinol dehydrogenase 11 ... 57 2e-08
Alignment gi|NP_899207.1| double substrate-specificity short chain dehydr... 50 3e-06
>ref|NP_001029685.1| carbonyl reductase 1 [Bos taurus]
Length = 277
Score = 452 bits (1164), Expect = e-127
Identities = 225/277 (81%), Positives = 242/277 (87%)
Frame = +3
Query: 198 MSSNIRVAVVTGGNKGIGLANVRDLCQQFSGDVMLTARDXXXXXXXXXXXXXEGLSPRFH 377
MSS+ VA+VTG NKGIG VRDLC++FSGDV+LTARD EGLSP FH
Sbjct: 1 MSSSNCVALVTGANKGIGFVIVRDLCRRFSGDVVLTARDEARGRAAVQQLQAEGLSPLFH 60
Query: 378 QLDIDDLRSIQALRDFLLKEYGGLNVLVNNAGIAFKTVDPTPFHIQAEVTMKTNFLGTRN 557
QLDIDD +SI+ALRDFL KEYGGL+VLVNNAGIAFKT D TPFHIQAEVTMKTNF GTR+
Sbjct: 61 QLDIDDRQSIRALRDFLRKEYGGLDVLVNNAGIAFKTADTTPFHIQAEVTMKTNFFGTRD 120
Query: 558 VCTELLPLIKPQGRVVNVSSTESVRALNNCSPELQQKFKSETITEEELVGLMNKFVEDTK 737
VCTELLPLIKPQGRVVNVSS SV +L CS ELQQKF+SETITEEELVGLMNKFVEDTK
Sbjct: 121 VCTELLPLIKPQGRVVNVSSFVSVNSLKKCSRELQQKFRSETITEEELVGLMNKFVEDTK 180
Query: 738 NGVHKKEGWPSTAYGVTKIGVTVLSRIYARKLSEQRAGDKILLNACCPGWVRTDMAGPKA 917
NGVH+KEGWP TAYGVTKIGVTVLSRI+ARKLSEQR GDKILLNACCPGWVRTDM GPKA
Sbjct: 181 NGVHRKEGWPDTAYGVTKIGVTVLSRIHARKLSEQRGGDKILLNACCPGWVRTDMGGPKA 240
Query: 918 PKSPEEGAETPVYLALLPSDAEGPHGQFVSEKKVVEW 1028
KSPEEGAETPVYLALLPSDAEGPHG+F+SEK+VV+W
Sbjct: 241 SKSPEEGAETPVYLALLPSDAEGPHGEFISEKRVVQW 277
>ref|XP_874747.1| PREDICTED: similar to Carbonyl reductase [NADPH] 1 (NADPH-dependent
carbonyl reductase 1) (Prostaglandin-E(2) 9-reductase)
(Prostaglandin 9-ketoreductase) (15-hydroxyprostaglandin
dehydrogenase [NADP+]) [Bos taurus]
Length = 277
Score = 446 bits (1148), Expect = e-125
Identities = 222/277 (80%), Positives = 239/277 (86%)
Frame = +3
Query: 198 MSSNIRVAVVTGGNKGIGLANVRDLCQQFSGDVMLTARDXXXXXXXXXXXXXEGLSPRFH 377
MSS+ RVA+VTG NKG+G A VR L F GDV+LTA D +GLSP FH
Sbjct: 1 MSSSTRVALVTGANKGLGFAIVRALAGGFQGDVVLTAPDEAQGRAAVQQLQAQGLSPLFH 60
Query: 378 QLDIDDLRSIQALRDFLLKEYGGLNVLVNNAGIAFKTVDPTPFHIQAEVTMKTNFLGTRN 557
QLDIDD +SI+ALRDFL KEYGGL+VLVNNAGIAFKT D TPFHIQAEVTMKTNF GTR+
Sbjct: 61 QLDIDDRQSIRALRDFLRKEYGGLDVLVNNAGIAFKTADTTPFHIQAEVTMKTNFFGTRD 120
Query: 558 VCTELLPLIKPQGRVVNVSSTESVRALNNCSPELQQKFKSETITEEELVGLMNKFVEDTK 737
VCTELLPLIKPQGRVVNVSS+ SV +L CSPELQQKF+SETITEEELVGLMNKFVEDTK
Sbjct: 121 VCTELLPLIKPQGRVVNVSSSVSVSSLKKCSPELQQKFQSETITEEELVGLMNKFVEDTK 180
Query: 738 NGVHKKEGWPSTAYGVTKIGVTVLSRIYARKLSEQRAGDKILLNACCPGWVRTDMAGPKA 917
NGVH+KEGWP TAYGVTKIGVTVLSRI+ARK+SEQR GDKILLNACCPGWVRTDM GPKA
Sbjct: 181 NGVHRKEGWPDTAYGVTKIGVTVLSRIHARKMSEQRGGDKILLNACCPGWVRTDMGGPKA 240
Query: 918 PKSPEEGAETPVYLALLPSDAEGPHGQFVSEKKVVEW 1028
PKSPEEGAETPVYLALLP DAEGPHGQFV EK+VV+W
Sbjct: 241 PKSPEEGAETPVYLALLPPDAEGPHGQFVHEKEVVQW 277
>ref|NP_001030258.1| 20-beta-hydroxysteroid dehydrogenase-like [Bos taurus]
Length = 286
Score = 419 bits (1076), Expect = e-117
Identities = 211/286 (73%), Positives = 234/286 (81%), Gaps = 1/286 (0%)
Frame = +3
Query: 198 MSSNIRVAVVTGGNKGIGLANVRDLCQQFSGDVMLTARDXXXXXXXXXXXXXEGLSPRFH 377
MSS+ RVA+VTG NKG+G A VRDLC++F GDV+LTARD EGLSPRFH
Sbjct: 1 MSSSTRVALVTGANKGLGFAIVRDLCRRFPGDVVLTARDEARGRAAVQQLQAEGLSPRFH 60
Query: 378 QLDIDDLRSIQALRDFLLKEYGGLNVLVNNAGIAFKTVDPTPFHIQAEVTMKTNFLGTRN 557
QLDI DL+SI ALRDFL KEYGGL+VLVNNA IAF+ DPTP I+AE+TMKTNF GTR+
Sbjct: 61 QLDITDLQSIHALRDFLRKEYGGLDVLVNNAAIAFQLSDPTPTPIKAEMTMKTNFFGTRD 120
Query: 558 VCTELLPLIKPQGRVVNVSSTESVRALNNCSPELQQKFKSETITEEELVGLMNKFVEDTK 737
+CTELLPL+KPQGRVVN+SS +AL +CSPELQQK +SETITEEELVGLMNKFVEDTK
Sbjct: 121 ICTELLPLMKPQGRVVNMSSGWGFKALESCSPELQQKLRSETITEEELVGLMNKFVEDTK 180
Query: 738 NGVHKKEGWP-STAYGVTKIGVTVLSRIYARKLSEQRAGDKILLNACCPGWVRTDMAGPK 914
NGVH+KEGWP + YGV KIG+T LSRI ARKLSEQR GDKILLNACCPGWVRTDM G K
Sbjct: 181 NGVHRKEGWPDNNIYGVAKIGITALSRIQARKLSEQRGGDKILLNACCPGWVRTDMGGSK 240
Query: 915 APKSPEEGAETPVYLALLPSDAEGPHGQFVSEKKVVEWGVPP*SYP 1052
A KS EEG ETP+YLALLPSDAEGPHGQFV EKKV +W P YP
Sbjct: 241 AFKSLEEGIETPMYLALLPSDAEGPHGQFVHEKKVAKWQFLPEFYP 286
>ref|XP_869745.1| PREDICTED: similar to carbonyl reductase 3 isoform 2 [Bos taurus]
Length = 277
Score = 399 bits (1024), Expect = e-111
Identities = 194/277 (70%), Positives = 226/277 (81%)
Frame = +3
Query: 198 MSSNIRVAVVTGGNKGIGLANVRDLCQQFSGDVMLTARDXXXXXXXXXXXXXEGLSPRFH 377
MSS RVA+VTG NKGIG A RDLC++F GDV+LTARD EGLSPRFH
Sbjct: 1 MSSYTRVALVTGANKGIGFAIARDLCREFPGDVVLTARDKARGRAAVQQLQAEGLSPRFH 60
Query: 378 QLDIDDLRSIQALRDFLLKEYGGLNVLVNNAGIAFKTVDPTPFHIQAEVTMKTNFLGTRN 557
QLDIDDL+SI+ALRDFL KEYGGLNVLVNNAGIAFKT DPTPF IQAE+T+KTNF TRN
Sbjct: 61 QLDIDDLQSIRALRDFLRKEYGGLNVLVNNAGIAFKTDDPTPFDIQAEMTLKTNFFATRN 120
Query: 558 VCTELLPLIKPQGRVVNVSSTESVRALNNCSPELQQKFKSETITEEELVGLMNKFVEDTK 737
VCTELLP++KP GRVVNVSS++ +AL NCS +LQ+KF+ ET+TEE+LV LM KFVEDTK
Sbjct: 121 VCTELLPIVKPHGRVVNVSSSQGSQALENCSEDLQEKFRCETLTEEDLVDLMKKFVEDTK 180
Query: 738 NGVHKKEGWPSTAYGVTKIGVTVLSRIYARKLSEQRAGDKILLNACCPGWVRTDMAGPKA 917
N VH++EGWP++AYGV+K+GVTVLSRI AR+L E+R D+ILLNACCPGWV+TD+ G A
Sbjct: 181 NEVHEREGWPNSAYGVSKLGVTVLSRILARRLEEKRKADRILLNACCPGWVKTDLGGAHA 240
Query: 918 PKSPEEGAETPVYLALLPSDAEGPHGQFVSEKKVVEW 1028
++ EEGAETPVYLALLP DA PHGQ V +K V W
Sbjct: 241 SRTVEEGAETPVYLALLPPDATEPHGQLVRDKVVQNW 277
>ref|XP_868956.1| PREDICTED: similar to Carbonyl reductase [NADPH] 1 (NADPH-dependent
carbonyl reductase 1) (Prostaglandin-E(2) 9-reductase)
(Prostaglandin 9-ketoreductase) (15-hydroxyprostaglandin
dehydrogenase [NADP+]) [Bos taurus]
Length = 327
Score = 266 bits (679), Expect = 3e-71
Identities = 165/309 (53%), Positives = 194/309 (62%), Gaps = 6/309 (1%)
Frame = +3
Query: 216 VAVVTGGNKGIGLANVRDLCQQFSGDVMLTARDXXXXXXXXXXXXXEGLSPRFHQLDIDD 395
+A+VTG NKGIGLA + +L G + R L +
Sbjct: 1 MALVTGANKGIGLAVL-----------LLGGAGTGDRGCIHIRAAPRGSARRPPPLSFHE 49
Query: 396 LRSIQALRDFLLKEYGGLNVLVNNAGIA---FKTVDPTPFHIQAEVTMKTNFLGTRNVCT 566
R + GG AGI+ D TPF IQAEVTMKTNF GTR VCT
Sbjct: 50 WRPL-----------GGSPA----AGISTHWISAADTTPFPIQAEVTMKTNFFGTRVVCT 94
Query: 567 ELLPLIKPQGRVVNVSSTESVRALNNCSPELQQKFKSETITEEELVGLMNKFVEDTKNGV 746
ELLPL+KPQGRVVNVSS+ SV +L CSPELQQKF+SETITEEELVGLMNKFVEDTKNGV
Sbjct: 95 ELLPLLKPQGRVVNVSSSVSVTSLKKCSPELQQKFQSETITEEELVGLMNKFVEDTKNGV 154
Query: 747 HKKEGWPSTAYGVTKIGVTVLSRIYARKLSEQRAGDKILLNACCPGWVRTD--MAGPKAP 920
H+KEGW TAYGVTKIGVTVL RI+ARKLSEQR GDKILLNACCPGWVRT+ KA
Sbjct: 155 HRKEGWRDTAYGVTKIGVTVLFRIHARKLSEQRGGDKILLNACCPGWVRTNKGRGRHKAL 214
Query: 921 KSPEEGAETP-VYLALLPSDAEGPHGQFVSEKKVVEWGVPP*SYPWVNA*FVS*FHQKDT 1097
++P+EGAETP ++ +P + Q V E+KVV ++ + F+S +Q DT
Sbjct: 215 RAPKEGAETPWLFCPRMPRGS----SQVVFERKVVCALTDSCTHGLIM--FLSQVYQSDT 268
Query: 1098 YTIKNIPVQ 1124
YT+ NIP Q
Sbjct: 269 YTVANIPTQ 277
>ref|XP_878838.1| PREDICTED: similar to carbonyl reductase 3 isoform 3 [Bos taurus]
Length = 169
Score = 248 bits (634), Expect = 5e-66
Identities = 115/169 (68%), Positives = 141/169 (83%)
Frame = +3
Query: 522 VTMKTNFLGTRNVCTELLPLIKPQGRVVNVSSTESVRALNNCSPELQQKFKSETITEEEL 701
+T+KTNF TRNVCTELLP++KP GRVVNVSS++ +AL NCS +LQ+KF+ ET+TEE+L
Sbjct: 1 MTLKTNFFATRNVCTELLPIVKPHGRVVNVSSSQGSQALENCSEDLQEKFRCETLTEEDL 60
Query: 702 VGLMNKFVEDTKNGVHKKEGWPSTAYGVTKIGVTVLSRIYARKLSEQRAGDKILLNACCP 881
V LM KFVEDTKN VH++EGWP++AYGV+K+GVTVLSRI AR+L E+R D+ILLNACCP
Sbjct: 61 VDLMKKFVEDTKNEVHEREGWPNSAYGVSKLGVTVLSRILARRLEEKRKADRILLNACCP 120
Query: 882 GWVRTDMAGPKAPKSPEEGAETPVYLALLPSDAEGPHGQFVSEKKVVEW 1028
GWV+TD+ G A ++ EEGAETPVYLALLP DA PHGQ V +K V W
Sbjct: 121 GWVKTDLGGAHASRTVEEGAETPVYLALLPPDATEPHGQLVRDKVVQNW 169
>ref|XP_594165.2| PREDICTED: similar to carbonyl reductase 3 isoform 1 [Bos taurus]
Length = 169
Score = 248 bits (634), Expect = 5e-66
Identities = 115/169 (68%), Positives = 141/169 (83%)
Frame = +3
Query: 522 VTMKTNFLGTRNVCTELLPLIKPQGRVVNVSSTESVRALNNCSPELQQKFKSETITEEEL 701
+T+KTNF TRNVCTELLP++KP GRVVNVSS++ +AL NCS +LQ+KF+ ET+TEE+L
Sbjct: 1 MTLKTNFFATRNVCTELLPIVKPHGRVVNVSSSQGSQALENCSEDLQEKFRCETLTEEDL 60
Query: 702 VGLMNKFVEDTKNGVHKKEGWPSTAYGVTKIGVTVLSRIYARKLSEQRAGDKILLNACCP 881
V LM KFVEDTKN VH++EGWP++AYGV+K+GVTVLSRI AR+L E+R D+ILLNACCP
Sbjct: 61 VDLMKKFVEDTKNEVHEREGWPNSAYGVSKLGVTVLSRILARRLEEKRKADRILLNACCP 120
Query: 882 GWVRTDMAGPKAPKSPEEGAETPVYLALLPSDAEGPHGQFVSEKKVVEW 1028
GWV+TD+ G A ++ EEGAETPVYLALLP DA PHGQ V +K V W
Sbjct: 121 GWVKTDLGGAHASRTVEEGAETPVYLALLPPDATEPHGQLVRDKVVQNW 169
>ref|XP_583859.2| PREDICTED: similar to short chain dehydrogenase/reductase [Bos
taurus]
Length = 317
Score = 61.6 bits (148), Expect = 1e-09
Identities = 74/290 (25%), Positives = 114/290 (39%), Gaps = 15/290 (5%)
Frame = +3
Query: 213 RVAVVTGGNKGIGLANVRDLCQQFSGDVMLTARDXXXXXXXXXXXXXEGLSPRFHQLDID 392
R +VTGGN GIG A ++ ++ G V L RD E + L I
Sbjct: 41 RAFMVTGGNSGIGKATAMEIAKR-GGTVHLVCRDHSRAEGAKAEIIRESGNQNIF-LHIV 98
Query: 393 DLRSIQALRDFL--LKEYGGLNVLVNNAGIAFKTVDPTPFHIQAEVTMKTNFLGTRNVCT 566
DL +++ F+ K+ LNVL+NNAG + T + E TN LG + T
Sbjct: 99 DLSLPKSVWKFVENFKQEHTLNVLINNAGCMVNKRELTEDGL--EKNFATNTLGVYVLTT 156
Query: 567 ELLPLIKPQG--RVVNVSSTES-VRALNNCSPELQQKFKSETITEEELVGLMNKFVEDTK 737
L+P+++ + RV+ VSS V+ LN P+ ++ T+ + ++ +
Sbjct: 157 ALIPVLEKEHDPRVITVSSGGMLVQKLNTDDPQSERTAFDGTMV----------YAQNKR 206
Query: 738 NGVHKKEGWPSTAYGVTKIGVTVLSRIYARKLSEQRAGDKILLNACCPGWVRTDMAGPKA 917
V E W RA I + PGWV T
Sbjct: 207 QQVVLTERWA-------------------------RAHPAIHFSCMHPGWVDTPGVRLSM 241
Query: 918 P----------KSPEEGAETPVYLALLPSDAEGPHGQFVSEKKVVEWGVP 1037
P +S +GA+T ++LAL P+ P G F ++K +P
Sbjct: 242 PGFHARLGARLRSEAQGADTVLWLALAPAATAQPSGCFFQDRKPAPTHLP 291
>ref|XP_592820.2| PREDICTED: similar to retinol dehydrogenase 11 (predicted) [Bos
taurus]
Length = 377
Score = 57.4 bits (137), Expect = 2e-08
Identities = 80/311 (25%), Positives = 122/311 (39%), Gaps = 19/311 (6%)
Frame = +3
Query: 165 PCRGTAAPLPTMSSNIRVAVVTGGNKGIGLANVRDLCQQFSGDVMLTARDXXXXXXXXXX 344
PCRG A S R AVVTG N GIG +L ++ V+L R
Sbjct: 27 PCRGLA------SLRGRTAVVTGANSGIGKMTALELARR-GARVVLACRSRERGEAAAFD 79
Query: 345 XXXEGLSPR--FHQLDIDDLRSIQALRDFLLKEYGGLNVLVNNAGIAFKTVDPTPFHIQA 518
E + F LD+ L S++A L L++L++NAGI+ PF++
Sbjct: 80 LRQESGNNEVIFMALDLASLASVRAFATAFLSSEPRLDILIHNAGISSCGRTREPFNL-- 137
Query: 519 EVTMKTNFLGTRNVCTELLPLIKPQ--GRVVNVSSTESVRALNNCSPELQQKFKSETITE 692
++ N +G + LLP +K RVV VSS R + T +
Sbjct: 138 --LLRVNHIGPFLLTHLLLPRLKTSAPSRVVVVSSAAHRRGRLDF-----------TRLD 184
Query: 693 EELVGLMNKFVEDTKNGVHKKEGWPSTAYGVTKIGVTVLSRIYARKLSEQRAGDKILLNA 872
+VG + AY +K+ + ++AR+L+ Q G + A
Sbjct: 185 HPVVGWQQEL----------------RAYANSKLA----NVLFARELATQLEGTGVTCYA 224
Query: 873 CCPGWVRTDMAGPKAP---------------KSPEEGAETPVYLALLPSDAEGPHGQFVS 1007
PG V +++ P ++P GA+TP+Y A L E G++ +
Sbjct: 225 AHPGPVNSELFLRHVPGWLRPLLRPLAWLVLRAPRGGAQTPLYCA-LQEGIEPLSGRYFA 283
Query: 1008 EKKVVEWGVPP 1040
V E VPP
Sbjct: 284 NCHVEE--VPP 292
>ref|NP_899207.1| double substrate-specificity short chain dehydrogenase/reductase 2
[Bos taurus]
Length = 316
Score = 50.4 bits (119), Expect = 3e-06
Identities = 43/143 (30%), Positives = 65/143 (45%), Gaps = 8/143 (5%)
Frame = +3
Query: 213 RVAVVTGGNKGIGLANVRDLCQQFSGDVMLTARDXXXXXXXXXXXXXEGLSPRF--HQLD 386
+V V+TG N GIG R+L ++ V + RD + + + +LD
Sbjct: 40 KVVVITGANTGIGKETARELARR-GARVYIACRDVLKGESAASEIQADTKNSQVLVRKLD 98
Query: 387 IDDLRSIQALRDFLLKEYGGLNVLVNNAGIAF----KTVDPTPFHIQAEVTMKTNFLGTR 554
+ D +SI+A + L E L++L+NNAG+ KT D H + N LG
Sbjct: 99 LSDTKSIRAFAEGFLAEEKQLHILINNAGVMLCPYSKTADGFETH------LAVNHLGHF 152
Query: 555 NVCTELLPLIKPQ--GRVVNVSS 617
+ LL +K RVVN+SS
Sbjct: 153 LLTHLLLGRLKESAPARVVNLSS 175
Database: RefSeqBP
Posted date: Aug 1, 2006 7:14 PM
Number of letters in database: 16,112,626
Number of sequences in database: 33,508
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 41,321,928
Number of Sequences: 33508
Number of extensions: 1126923
Number of successful extensions: 4879
Number of sequences better than 1.0e-05: 10
Number of HSP's better than 0.0 without gapping: 4152
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4854
length of database: 16,112,626
effective HSP length: 103
effective length of database: 12,661,302
effective search space used: 3507180654
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
Search to RefSeqCP
BLASTX 2.2.10 [Oct-19-2004]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TES01_0047_C11
(1142 letters)
Database: RefSeqCP
33,732 sequences; 19,266,565 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_852675.1| PREDICTED: similar to Carbonyl reductase [NADPH... 453 e-127
Alignment gi|XP_537903.1| PREDICTED: similar to Carbonyl reductase [NADPH... 419 e-117
Alignment gi|XP_535589.2| PREDICTED: similar to Carbonyl reductase [NADPH... 412 e-115
Alignment gi|XP_544873.2| PREDICTED: similar to carbonyl reductase 3 [Can... 406 e-113
Alignment gi|XP_533000.2| PREDICTED: similar to Retinol dehydrogenase 12 ... 54 2e-07
Alignment gi|XP_854354.1| PREDICTED: similar to Retinol dehydrogenase 11 ... 52 8e-07
Alignment gi|XP_547866.2| PREDICTED: similar to retinol dehydrogenase 12 ... 50 3e-06
>ref|XP_852675.1| PREDICTED: similar to Carbonyl reductase [NADPH] 1 (NADPH-dependent
carbonyl reductase 1) (Prostaglandin-E(2) 9-reductase)
(Prostaglandin 9-ketoreductase) (15-hydroxyprostaglandin
dehydrogenase [NADP+]) [Canis familiaris]
Length = 277
Score = 453 bits (1165), Expect = e-127
Identities = 224/277 (80%), Positives = 242/277 (87%)
Frame = +3
Query: 198 MSSNIRVAVVTGGNKGIGLANVRDLCQQFSGDVMLTARDXXXXXXXXXXXXXEGLSPRFH 377
MS+ RVA+VTG NKGIG A R+LC+QFSGDV+LTARD EGLSPRFH
Sbjct: 1 MSAASRVALVTGANKGIGFAIARELCRQFSGDVVLTARDEARGRAAVQQLQAEGLSPRFH 60
Query: 378 QLDIDDLRSIQALRDFLLKEYGGLNVLVNNAGIAFKTVDPTPFHIQAEVTMKTNFLGTRN 557
LDIDDL+SI+ALRDFL KEYGGL+VLVNNAGIAFKT DPTPFHIQAEVTMKTNF GTR+
Sbjct: 61 LLDIDDLQSIRALRDFLRKEYGGLDVLVNNAGIAFKTNDPTPFHIQAEVTMKTNFFGTRD 120
Query: 558 VCTELLPLIKPQGRVVNVSSTESVRALNNCSPELQQKFKSETITEEELVGLMNKFVEDTK 737
VCTELLPL+KPQGRVVNVSS SVRAL +CSPELQQKF+SE ITEEELVGLMNKFVEDTK
Sbjct: 121 VCTELLPLMKPQGRVVNVSSVVSVRALKSCSPELQQKFRSEAITEEELVGLMNKFVEDTK 180
Query: 738 NGVHKKEGWPSTAYGVTKIGVTVLSRIYARKLSEQRAGDKILLNACCPGWVRTDMAGPKA 917
GVH+ EGWP AYGVTKIGVTVLSRI+ARKLSEQR DKILLNACCPGWVRTDMAGP+A
Sbjct: 181 KGVHRNEGWPDNAYGVTKIGVTVLSRIHARKLSEQRRDDKILLNACCPGWVRTDMAGPRA 240
Query: 918 PKSPEEGAETPVYLALLPSDAEGPHGQFVSEKKVVEW 1028
PKSPEEGAETPVYLALLPSDAEGPHG+F+ EKKV +W
Sbjct: 241 PKSPEEGAETPVYLALLPSDAEGPHGEFLMEKKVEQW 277
>ref|XP_537903.1| PREDICTED: similar to Carbonyl reductase [NADPH] 1 (NADPH-dependent
carbonyl reductase 1) (Prostaglandin-E(2) 9-reductase)
(Prostaglandin 9-ketoreductase) (15-hydroxyprostaglandin
dehydrogenase [NADP+]) [Canis familiaris]
Length = 296
Score = 419 bits (1078), Expect = e-117
Identities = 210/283 (74%), Positives = 231/283 (81%), Gaps = 3/283 (1%)
Frame = +3
Query: 198 MSSNIRVAVVTGGNKGIGLANVRDLCQQFSGDVMLTARDXXXXXXXXXXXXXEGLSPRFH 377
MS +RVAVVTG NKG+G A RDLC+ F GDV+LT+RD EGLSPRFH
Sbjct: 1 MSLALRVAVVTGANKGLGFAITRDLCRNFPGDVILTSRDEARGRAAVQHLKAEGLSPRFH 60
Query: 378 QLDIDDLRSIQALRDFLLKEYGGLNVLVNNAGIAFKTVDPTPFHIQAEVTMKTNFLGTRN 557
LDID+L+SI+ALRDFL +EYGGL+VLVNNAGI F DPTP HIQAEVT+KTNF GTR+
Sbjct: 61 LLDIDNLQSIRALRDFLWEEYGGLDVLVNNAGIVFTPDDPTPLHIQAEVTLKTNFFGTRD 120
Query: 558 VCTELLPLIKPQGRVVNVSSTESVRALNNCSPELQQKFKSETITEEELVGLMNKFVEDTK 737
+CTELLPL+KPQGRVVNVSS S AL CSPELQQKF SETITEEEL LMNKF+ED K
Sbjct: 121 ICTELLPLVKPQGRVVNVSSIMSFLALKQCSPELQQKFTSETITEEELGMLMNKFLEDVK 180
Query: 738 NGVHKKEGWPS---TAYGVTKIGVTVLSRIYARKLSEQRAGDKILLNACCPGWVRTDMAG 908
NGVHKKEGWP AY V+K+GVTVLSRI+ARKLSEQR DKILLNACCPGWVRTDM G
Sbjct: 181 NGVHKKEGWPDIKIAAYSVSKMGVTVLSRIHARKLSEQRRDDKILLNACCPGWVRTDMGG 240
Query: 909 PKAPKSPEEGAETPVYLALLPSDAEGPHGQFVSEKKVVEWGVP 1037
PK KSPEEGAETPVYLALLPSDAEGPHG+FV EKKV +WG+P
Sbjct: 241 PKGIKSPEEGAETPVYLALLPSDAEGPHGEFVMEKKVEQWGLP 283
>ref|XP_535589.2| PREDICTED: similar to Carbonyl reductase [NADPH] 1 (NADPH-dependent
carbonyl reductase 1) (Prostaglandin-E(2) 9-reductase)
(Prostaglandin 9-ketoreductase) (15-hydroxyprostaglandin
dehydrogenase [NADP+]) [Canis familiaris]
Length = 292
Score = 412 bits (1059), Expect = e-115
Identities = 208/290 (71%), Positives = 228/290 (78%), Gaps = 3/290 (1%)
Frame = +3
Query: 198 MSSNIRVAVVTGGNKGIGLANVRDLCQQFSGDVMLTARDXXXXXXXXXXXXXEGLSPRFH 377
MSS RVAVVTG NKG+G A +RDLC+ FSGDV+LTARD +GLSPRFH
Sbjct: 1 MSSAPRVAVVTGANKGLGFAIMRDLCRNFSGDVVLTARDEARGRAAVQQLQSKGLSPRFH 60
Query: 378 QLDIDDLRSIQALRDFLLKEYGGLNVLVNNAGIAFKTVDPTPFHIQAEVTMKTNFLGTRN 557
LDIDDL+SI LRDFL KEY GL+VLVNNAGI F T DPTP IQAEVT+KTNF GTRN
Sbjct: 61 LLDIDDLQSICTLRDFLCKEYRGLDVLVNNAGINFDTGDPTPLPIQAEVTLKTNFFGTRN 120
Query: 558 VCTELLPLIKPQGRVVNVSSTESVRALNNCSPELQQKFKSETITEEELVGLMNKFVEDTK 737
VC ELLPL+KPQGRVVNVSS L CSPELQQKF SE ITEEEL LMNKFVED K
Sbjct: 121 VCRELLPLMKPQGRVVNVSSVMGFVTLKQCSPELQQKFTSEAITEEELGMLMNKFVEDVK 180
Query: 738 NGVHKKEGWPS---TAYGVTKIGVTVLSRIYARKLSEQRAGDKILLNACCPGWVRTDMAG 908
NGVHKKEGWP YG++K+G+T+LSRI+ARKLSEQR GDKI LNACCPGW+RTDM G
Sbjct: 181 NGVHKKEGWPDMKLVTYGISKMGITILSRIHARKLSEQRRGDKIFLNACCPGWLRTDMGG 240
Query: 909 PKAPKSPEEGAETPVYLALLPSDAEGPHGQFVSEKKVVEWGVPP*SYPWV 1058
PK KSPEEGAETPVYLALLPSDAEGPHG+FV EKKV +WG+ PW+
Sbjct: 241 PKGIKSPEEGAETPVYLALLPSDAEGPHGEFVMEKKVEQWGLSFQFPPWI 290
>ref|XP_544873.2| PREDICTED: similar to carbonyl reductase 3 [Canis familiaris]
Length = 484
Score = 406 bits (1043), Expect = e-113
Identities = 213/343 (62%), Positives = 251/343 (73%), Gaps = 2/343 (0%)
Frame = +3
Query: 6 RPSAGGARAFALSPEARGESAASGHPT--HSASHRLPALRRPSASRLGETRPIRCPCRGT 179
RP A +R+ SP ++ S G P+ H A+ R P R P +R P R
Sbjct: 156 RPGAWFSRS--RSPGSQ-RSGLWGFPSCVHGAAARSPGARSP----------VRSP-RAP 201
Query: 180 AAPLPTMSSNIRVAVVTGGNKGIGLANVRDLCQQFSGDVMLTARDXXXXXXXXXXXXXEG 359
PLP MSS RVA+VTG N+GIG A R+LC+QFSGDV+LTARD EG
Sbjct: 202 GPPLPAMSSCSRVALVTGANRGIGFAIARELCRQFSGDVVLTARDEARGRAAVQQLQAEG 261
Query: 360 LSPRFHQLDIDDLRSIQALRDFLLKEYGGLNVLVNNAGIAFKTVDPTPFHIQAEVTMKTN 539
LSPRFH LDIDDL+SI+ALRDFL KEYGGLNVLVNNAGIAFK DPTPF IQAE+T+KTN
Sbjct: 262 LSPRFHLLDIDDLQSIRALRDFLRKEYGGLNVLVNNAGIAFKPDDPTPFDIQAEITLKTN 321
Query: 540 FLGTRNVCTELLPLIKPQGRVVNVSSTESVRALNNCSPELQQKFKSETITEEELVGLMNK 719
F TRNVC ELLP+IKP GRVVN+SS E +AL NCS +LQ+KF+ ET+TEE+LV LM K
Sbjct: 322 FFATRNVCNELLPIIKPHGRVVNISSLEGSKALENCSADLQKKFQCETLTEEDLVDLMKK 381
Query: 720 FVEDTKNGVHKKEGWPSTAYGVTKIGVTVLSRIYARKLSEQRAGDKILLNACCPGWVRTD 899
FVEDT N VH++EGWP++AYGV+K+GVTVLSRI A +L E+R D+ILLNACCPGWV+TD
Sbjct: 382 FVEDTSNEVHEREGWPNSAYGVSKLGVTVLSRILAWRLDEKRKVDRILLNACCPGWVKTD 441
Query: 900 MAGPKAPKSPEEGAETPVYLALLPSDAEGPHGQFVSEKKVVEW 1028
M GP P++ EEGAETPVYLALLP DA PHGQ V +K V+ W
Sbjct: 442 MGGPYGPRTVEEGAETPVYLALLPPDATEPHGQLVHDKVVLNW 484
>ref|XP_533000.2| PREDICTED: similar to Retinol dehydrogenase 12 [Canis familiaris]
Length = 596
Score = 54.3 bits (129), Expect = 2e-07
Identities = 45/141 (31%), Positives = 72/141 (51%), Gaps = 6/141 (4%)
Frame = +3
Query: 213 RVAVVTGGNKGIGLANVRDLCQQFSGDVMLTAR--DXXXXXXXXXXXXXEGLSPRFHQLD 386
+ AVVTG N GIG A ++L ++ V+L R + +G Q+D
Sbjct: 316 KTAVVTGANSGIGKAVCQELARR-GARVILACRNWERGQKALAEIQVASKGTCLLLGQVD 374
Query: 387 IDDLRSIQALRDFLLKEYGGLNVLVNNAGIAF--KTVDPTPFHIQAEVTMKTNFLGTRNV 560
+ + SI++ +LL+EY +++LVNNA I+ KT+ P ++T TN++G +
Sbjct: 375 LSSMASIRSFARWLLQEYPEIHLLVNNAAISGFPKTLTPEGL----DLTFATNYVGPFLL 430
Query: 561 CTELLPLIKPQG--RVVNVSS 617
L ++ G RVVNVSS
Sbjct: 431 TNLLQGALQRAGSARVVNVSS 451
>ref|XP_854354.1| PREDICTED: similar to Retinol dehydrogenase 11 (Retinal reductase
1) (RalR1) (Prostate short-chain dehydrogenase/reductase
1) (Androgen-regulated short-chain
dehydrogenase/reductase 1) (HCV core-binding protein
HCBP12) [Canis familiaris]
Length = 337
Score = 52.4 bits (124), Expect = 8e-07
Identities = 48/143 (33%), Positives = 65/143 (45%), Gaps = 8/143 (5%)
Frame = +3
Query: 213 RVAVVTGGNKGIGLANVRDLCQQFSGDVMLTARDXXXXXXXXXXXXXEGLSPRF--HQLD 386
+VAVVTG N GIG ++L Q+ V L RD + + +LD
Sbjct: 61 KVAVVTGANTGIGKETAKELAQR-GARVYLACRDVLKGELVAREIQTMTGNKQVLVRKLD 119
Query: 387 IDDLRSIQALRDFLLKEYGGLNVLVNNAGIAF----KTVDPTPFHIQAEVTMKTNFLGTR 554
+ D +SI+A L E L++L+NNAG+ KTVD H M N LG
Sbjct: 120 LADTKSIRAFAKGFLAEEKHLHILINNAGVMMCPYTKTVDGFEMH------MGVNHLGHF 173
Query: 555 NVCTELLPLIKPQ--GRVVNVSS 617
+ LL +K R+VNVSS
Sbjct: 174 LLTHLLLEKLKESAPSRIVNVSS 196
>ref|XP_547866.2| PREDICTED: similar to retinol dehydrogenase 12 (all-trans and
9-cis) [Canis familiaris]
Length = 303
Score = 50.4 bits (119), Expect = 3e-06
Identities = 43/143 (30%), Positives = 65/143 (45%), Gaps = 8/143 (5%)
Frame = +3
Query: 213 RVAVVTGGNKGIGLANVRDLCQQFSGDVMLTARDXXXXXXXXXXXXXEGLSPRF--HQLD 386
+V V+TG N GIG R+L ++ V + RD + + + +LD
Sbjct: 27 KVVVITGANTGIGKETARELARR-GARVYIACRDVLKGESAASEIRADTKNSQVLVRKLD 85
Query: 387 IDDLRSIQALRDFLLKEYGGLNVLVNNAGIAF----KTVDPTPFHIQAEVTMKTNFLGTR 554
+ D +SI+A + L E L++L+NNAG+ KT D H + N LG
Sbjct: 86 LSDTKSIRAFAEGFLAEEKQLHILINNAGVMMCPYSKTADGFETH------LGVNHLGHF 139
Query: 555 NVCTELLPLIKPQ--GRVVNVSS 617
+ LL +K RVVN+SS
Sbjct: 140 LLTHLLLERLKESTPARVVNLSS 162
Database: RefSeqCP
Posted date: Aug 1, 2006 9:25 PM
Number of letters in database: 19,266,565
Number of sequences in database: 33,732
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 48,442,566
Number of Sequences: 33732
Number of extensions: 1315683
Number of successful extensions: 5395
Number of sequences better than 1.0e-05: 7
Number of HSP's better than 0.0 without gapping: 4594
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5366
length of database: 19,266,565
effective HSP length: 105
effective length of database: 15,724,705
effective search space used: 4324293875
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
Search to RefSeqHP
BLASTX 2.2.10 [Oct-19-2004]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TES01_0047_C11
(1142 letters)
Database: RefSeqHP
39,411 sequences; 17,774,539 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001748.1| carbonyl reductase 1 [Homo sapiens] 469 e-132
Alignment gi|NP_001227.1| carbonyl reductase 3 [Homo sapiens] 371 e-103
Alignment gi|NP_689656.1| retinol dehydrogenase 12 (all-trans and 9-cis) ... 51 2e-06
Alignment gi|NP_057110.2| androgen-regulated short-chain dehydrogenase/re... 50 3e-06
>ref|NP_001748.1| carbonyl reductase 1 [Homo sapiens]
Length = 277
Score = 469 bits (1208), Expect = e-132
Identities = 234/277 (84%), Positives = 248/277 (89%)
Frame = +3
Query: 198 MSSNIRVAVVTGGNKGIGLANVRDLCQQFSGDVMLTARDXXXXXXXXXXXXXEGLSPRFH 377
MSS I VA+VTGGNKGIGLA VRDLC+ FSGDV+LTARD EGLSPRFH
Sbjct: 1 MSSGIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFH 60
Query: 378 QLDIDDLRSIQALRDFLLKEYGGLNVLVNNAGIAFKTVDPTPFHIQAEVTMKTNFLGTRN 557
QLDIDDL+SI+ALRDFL KEYGGL+VLVNNAGIAFK DPTPFHIQAEVTMKTNF GTR+
Sbjct: 61 QLDIDDLQSIRALRDFLRKEYGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRD 120
Query: 558 VCTELLPLIKPQGRVVNVSSTESVRALNNCSPELQQKFKSETITEEELVGLMNKFVEDTK 737
VCTELLPLIKPQGRVVNVSS SVRAL +CSPELQQKF+SETITEEELVGLMNKFVEDTK
Sbjct: 121 VCTELLPLIKPQGRVVNVSSIMSVRALKSCSPELQQKFRSETITEEELVGLMNKFVEDTK 180
Query: 738 NGVHKKEGWPSTAYGVTKIGVTVLSRIYARKLSEQRAGDKILLNACCPGWVRTDMAGPKA 917
GVH+KEGWPS+AYGVTKIGVTVLSRI+ARKLSEQR GDKILLNACCPGWVRTDMAGPKA
Sbjct: 181 KGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAGPKA 240
Query: 918 PKSPEEGAETPVYLALLPSDAEGPHGQFVSEKKVVEW 1028
KSPEEGAETPVYLALLP DAEGPHGQFVSEK+V +W
Sbjct: 241 TKSPEEGAETPVYLALLPPDAEGPHGQFVSEKRVEQW 277
>ref|NP_001227.1| carbonyl reductase 3 [Homo sapiens]
Length = 277
Score = 371 bits (952), Expect = e-103
Identities = 182/277 (65%), Positives = 220/277 (79%)
Frame = +3
Query: 198 MSSNIRVAVVTGGNKGIGLANVRDLCQQFSGDVMLTARDXXXXXXXXXXXXXEGLSPRFH 377
MSS RVA+VTG N+GIGLA R+LC+QFSGDV+LTARD EGLSPRFH
Sbjct: 1 MSSCSRVALVTGANRGIGLAIARELCRQFSGDVVLTARDVARGQAAVQQLQAEGLSPRFH 60
Query: 378 QLDIDDLRSIQALRDFLLKEYGGLNVLVNNAGIAFKTVDPTPFHIQAEVTMKTNFLGTRN 557
QLDIDDL+SI+ALRDFL KEYGGLNVLVNNA +AFK+ DP PF I+AE+T+KTNF TRN
Sbjct: 61 QLDIDDLQSIRALRDFLRKEYGGLNVLVNNAAVAFKSDDPMPFDIKAEMTLKTNFFATRN 120
Query: 558 VCTELLPLIKPQGRVVNVSSTESVRALNNCSPELQQKFKSETITEEELVGLMNKFVEDTK 737
+C ELLP++KP GRVVN+SS + +RA NCS +LQ++F SET+TE +LV LM KFVEDTK
Sbjct: 121 MCNELLPIMKPHGRVVNISSLQCLRAFENCSEDLQERFHSETLTEGDLVDLMKKFVEDTK 180
Query: 738 NGVHKKEGWPSTAYGVTKIGVTVLSRIYARKLSEQRAGDKILLNACCPGWVRTDMAGPKA 917
N VH++EGWP++ YGV+K+GVTVLSRI AR+L E+R D+IL+NACCPG V+TDM G +
Sbjct: 181 NEVHEREGWPNSPYGVSKLGVTVLSRILARRLDEKRKADRILVNACCPGPVKTDMDGKDS 240
Query: 918 PKSPEEGAETPVYLALLPSDAEGPHGQFVSEKKVVEW 1028
++ EEGAETPVYLALLP DA P GQ V +K V W
Sbjct: 241 IRTVEEGAETPVYLALLPPDATEPQGQLVHDKVVQNW 277
>ref|NP_689656.1| retinol dehydrogenase 12 (all-trans and 9-cis) [Homo sapiens]
Length = 316
Score = 50.8 bits (120), Expect = 2e-06
Identities = 43/141 (30%), Positives = 65/141 (46%), Gaps = 6/141 (4%)
Frame = +3
Query: 213 RVAVVTGGNKGIGLANVRDLCQQFSGDVMLTARDXXXXXXXXXXXXXEGLSPRF--HQLD 386
+V V+TG N GIG R+L + V + RD + + + +LD
Sbjct: 40 KVVVITGANTGIGKETARELASR-GARVYIACRDVLKGESAASEIRVDTKNSQVLVRKLD 98
Query: 387 IDDLRSIQALRDFLLKEYGGLNVLVNNAGIAF----KTVDPTPFHIQAEVTMKTNFLGTR 554
+ D +SI+A + L E L++L+NNAG+ KT D H+ V +FL T
Sbjct: 99 LSDTKSIRAFAEGFLAEEKQLHILINNAGVMMCPYSKTADGFETHL--GVNHLGHFLLTY 156
Query: 555 NVCTELLPLIKPQGRVVNVSS 617
+ +L + RVVNVSS
Sbjct: 157 LLLEQL--KVSAPARVVNVSS 175
>ref|NP_057110.2| androgen-regulated short-chain dehydrogenase/reductase 1 [Homo
sapiens]
Length = 318
Score = 50.4 bits (119), Expect = 3e-06
Identities = 47/143 (32%), Positives = 63/143 (44%), Gaps = 8/143 (5%)
Frame = +3
Query: 213 RVAVVTGGNKGIGLANVRDLCQQFSGDVMLTARDXXXXXXXXXXXXXEGLSPRF--HQLD 386
+V VVTG N GIG ++L Q+ V L RD + + +LD
Sbjct: 42 KVVVVTGANTGIGKETAKELAQR-GARVYLACRDVEKGELVAKEIQTTTGNQQVLVRKLD 100
Query: 387 IDDLRSIQALRDFLLKEYGGLNVLVNNAGIAF----KTVDPTPFHIQAEVTMKTNFLGTR 554
+ D +SI+A L E L+VL+NNAG+ KT D HI N LG
Sbjct: 101 LSDTKSIRAFAKGFLAEEKHLHVLINNAGVMMCPYSKTADGFEMHI------GVNHLGHF 154
Query: 555 NVCTELLPLIKPQ--GRVVNVSS 617
+ LL +K R+VNVSS
Sbjct: 155 LLTHLLLEKLKESAPSRIVNVSS 177
Database: RefSeqHP
Posted date: Aug 2, 2006 12:57 AM
Number of letters in database: 17,774,539
Number of sequences in database: 39,411
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 46,982,242
Number of Sequences: 39411
Number of extensions: 1324736
Number of successful extensions: 5814
Number of sequences better than 1.0e-05: 4
Number of HSP's better than 0.0 without gapping: 4726
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5790
length of database: 17,774,539
effective HSP length: 104
effective length of database: 13,675,795
effective search space used: 3774519420
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
Search to RefSeqSP
BLASTX 2.2.10 [Oct-19-2004]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TES01_0047_C11
(1142 letters)
Database: RefSeqSP
1040 sequences; 434,620 total letters
Searching...done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_999238.1| 20-beta-hydroxysteroid dehydrogenase [Sus scrofa] 488 e-139
>ref|NP_999238.1| 20-beta-hydroxysteroid dehydrogenase [Sus scrofa]
Length = 289
Score = 488 bits (1256), Expect = e-139
Identities = 241/289 (83%), Positives = 257/289 (88%)
Frame = +3
Query: 198 MSSNIRVAVVTGGNKGIGLANVRDLCQQFSGDVMLTARDXXXXXXXXXXXXXEGLSPRFH 377
MSSN RVA+VTG NKGIG A VRDLC+QF+GDV+LTARD EGLSPRFH
Sbjct: 1 MSSNTRVALVTGANKGIGFAIVRDLCRQFAGDVVLTARDVARGQAAVKQLQAEGLSPRFH 60
Query: 378 QLDIDDLRSIQALRDFLLKEYGGLNVLVNNAGIAFKTVDPTPFHIQAEVTMKTNFLGTRN 557
QLDI DL+SI+AL DFL KEYGGL+VLVNNA IAF+ +PTPFHIQAE+TMKTNF+GTRN
Sbjct: 61 QLDIIDLQSIRALCDFLRKEYGGLDVLVNNAAIAFQLDNPTPFHIQAELTMKTNFMGTRN 120
Query: 558 VCTELLPLIKPQGRVVNVSSTESVRALNNCSPELQQKFKSETITEEELVGLMNKFVEDTK 737
VCTELLPLIKPQGRVVNVSSTE VRALN CSPELQQKFKSETITEEELVGLMNKFVEDTK
Sbjct: 121 VCTELLPLIKPQGRVVNVSSTEGVRALNECSPELQQKFKSETITEEELVGLMNKFVEDTK 180
Query: 738 NGVHKKEGWPSTAYGVTKIGVTVLSRIYARKLSEQRAGDKILLNACCPGWVRTDMAGPKA 917
NGVH+KEGW + YGVTKIGV+VLSRIYARKL EQRAGDKILLNACCPGWVRTDM GPKA
Sbjct: 181 NGVHRKEGWSDSTYGVTKIGVSVLSRIYARKLREQRAGDKILLNACCPGWVRTDMGGPKA 240
Query: 918 PKSPEEGAETPVYLALLPSDAEGPHGQFVSEKKVVEWGVPP*SYPWVNA 1064
PKSPE GAETPVYLALLPSDAEGPHGQFV++KKVVEWGVPP SYPWVNA
Sbjct: 241 PKSPEVGAETPVYLALLPSDAEGPHGQFVTDKKVVEWGVPPESYPWVNA 289
Database: RefSeqSP
Posted date: Aug 1, 2006 7:14 PM
Number of letters in database: 434,620
Number of sequences in database: 1040
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,096,533
Number of Sequences: 1040
Number of extensions: 28557
Number of successful extensions: 119
Number of sequences better than 1.0e-05: 1
Number of HSP's better than 0.0 without gapping: 106
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 118
length of database: 434,620
effective HSP length: 78
effective length of database: 353,500
effective search space used: 106757000
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
Search to RefSeqMP
BLASTX 2.2.10 [Oct-19-2004]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TES01_0047_C11
(1142 letters)
Database: RefSeqMP
45,328 sequences; 21,768,885 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_031646.1| carbonyl reductase 1 [Mus musculus] 431 e-121
Alignment gi|XP_487442.1| PREDICTED: similar to Carbonyl reductase [NADPH... 423 e-118
Alignment gi|XP_989090.1| PREDICTED: similar to Carbonyl reductase [NADPH... 423 e-118
Alignment gi|XP_359206.3| PREDICTED: similar to Carbonyl reductase [NADPH... 420 e-117
Alignment gi|NP_766635.1| carbonyl reductase 3 [Mus musculus] 385 e-107
Alignment gi|NP_780581.1| retinol dehydrogenase 13 (all-trans and 9-cis) ... 62 1e-09
Alignment gi|NP_084293.1| retinol dehydrogenase 12 [Mus musculus] 52 9e-07
Alignment gi|NP_067532.2| short-chain dehydrogenase/reductase 1 [Mus musc... 52 1e-06
>ref|NP_031646.1| carbonyl reductase 1 [Mus musculus]
Length = 277
Score = 431 bits (1107), Expect = e-121
Identities = 217/277 (78%), Positives = 235/277 (84%)
Frame = +3
Query: 198 MSSNIRVAVVTGGNKGIGLANVRDLCQQFSGDVMLTARDXXXXXXXXXXXXXEGLSPRFH 377
MSS+ VA+VTG NKGIG A RDLC++FSGDV+L ARD EGLSPRFH
Sbjct: 1 MSSSRPVALVTGANKGIGFAITRDLCRKFSGDVVLAARDEERGQTAVQKLQAEGLSPRFH 60
Query: 378 QLDIDDLRSIQALRDFLLKEYGGLNVLVNNAGIAFKTVDPTPFHIQAEVTMKTNFLGTRN 557
QLDID+ +SI+ALRDFLLKEYGGL+VLVN AGIAFK D TPFHIQAEVTM+TNF GTR+
Sbjct: 61 QLDIDNPQSIRALRDFLLKEYGGLDVLVNKAGIAFKVNDDTPFHIQAEVTMETNFFGTRD 120
Query: 558 VCTELLPLIKPQGRVVNVSSTESVRALNNCSPELQQKFKSETITEEELVGLMNKFVEDTK 737
VC ELLPLIKPQGRVVNVSS S+RAL NC ELQQKF+SETITEEELVGLMNKFVEDTK
Sbjct: 121 VCKELLPLIKPQGRVVNVSSMVSLRALKNCRLELQQKFRSETITEEELVGLMNKFVEDTK 180
Query: 738 NGVHKKEGWPSTAYGVTKIGVTVLSRIYARKLSEQRAGDKILLNACCPGWVRTDMAGPKA 917
GVH +EGWP++AYGVTKIGVTVLSRI ARKL+EQR DKILLNACCPGWVRTDMAGPKA
Sbjct: 181 KGVHAEEGWPNSAYGVTKIGVTVLSRILARKLNEQRREDKILLNACCPGWVRTDMAGPKA 240
Query: 918 PKSPEEGAETPVYLALLPSDAEGPHGQFVSEKKVVEW 1028
KSPEEGAETPVYLALLP DAEGPHGQFV +KKV W
Sbjct: 241 TKSPEEGAETPVYLALLPPDAEGPHGQFVQDKKVEPW 277
>ref|XP_487442.1| PREDICTED: similar to Carbonyl reductase [NADPH] 1 (NADPH-dependent
carbonyl reductase 1) [Mus musculus]
Length = 277
Score = 423 bits (1088), Expect = e-118
Identities = 211/277 (76%), Positives = 232/277 (83%)
Frame = +3
Query: 198 MSSNIRVAVVTGGNKGIGLANVRDLCQQFSGDVMLTARDXXXXXXXXXXXXXEGLSPRFH 377
MS RVA+VTGGNKGIG +RDLCQ+FSGDV+LTARD EGL+PRFH
Sbjct: 1 MSPCSRVALVTGGNKGIGFEIIRDLCQKFSGDVVLTARDEARGCAAVQKLQAEGLNPRFH 60
Query: 378 QLDIDDLRSIQALRDFLLKEYGGLNVLVNNAGIAFKTVDPTPFHIQAEVTMKTNFLGTRN 557
QLDIDD +SI ALRDFLLKEY GL+VLVNNAGIAFK DPTPFHI+ EVTMKTNF GTR+
Sbjct: 61 QLDIDDPQSIHALRDFLLKEYKGLDVLVNNAGIAFKVDDPTPFHIKGEVTMKTNFFGTRD 120
Query: 558 VCTELLPLIKPQGRVVNVSSTESVRALNNCSPELQQKFKSETITEEELVGLMNKFVEDTK 737
VC E+LPLIKPQGRVVNVSS S+ AL +CSPELQQKF+SETITEEELVGLMNK+VED K
Sbjct: 121 VCKEMLPLIKPQGRVVNVSSMVSLSALKDCSPELQQKFRSETITEEELVGLMNKYVEDAK 180
Query: 738 NGVHKKEGWPSTAYGVTKIGVTVLSRIYARKLSEQRAGDKILLNACCPGWVRTDMAGPKA 917
GV+ KE WP++AY V+KIGVTVLSRI ARKL+EQR GDKILLNACCPGWVRTDM GP+A
Sbjct: 181 KGVYVKEDWPNSAYEVSKIGVTVLSRILARKLNEQRRGDKILLNACCPGWVRTDMTGPQA 240
Query: 918 PKSPEEGAETPVYLALLPSDAEGPHGQFVSEKKVVEW 1028
KSPEEGAETPVYLALLP DAEGPHGQFV +K V W
Sbjct: 241 TKSPEEGAETPVYLALLPPDAEGPHGQFVQDKTVEPW 277
>ref|XP_989090.1| PREDICTED: similar to Carbonyl reductase [NADPH] 1 (NADPH-dependent
carbonyl reductase 1) [Mus musculus]
Length = 277
Score = 423 bits (1088), Expect = e-118
Identities = 211/277 (76%), Positives = 232/277 (83%)
Frame = +3
Query: 198 MSSNIRVAVVTGGNKGIGLANVRDLCQQFSGDVMLTARDXXXXXXXXXXXXXEGLSPRFH 377
MS RVA+VTGGNKGIG +RDLCQ+FSGDV+LTARD EGL+PRFH
Sbjct: 1 MSPCSRVALVTGGNKGIGFEIIRDLCQKFSGDVVLTARDEARGCAAVQKLQAEGLNPRFH 60
Query: 378 QLDIDDLRSIQALRDFLLKEYGGLNVLVNNAGIAFKTVDPTPFHIQAEVTMKTNFLGTRN 557
QLDIDD +SI ALRDFLLKEY GL+VLVNNAGIAFK DPTPFHI+ EVTMKTNF GTR+
Sbjct: 61 QLDIDDPQSIHALRDFLLKEYKGLDVLVNNAGIAFKVDDPTPFHIKGEVTMKTNFFGTRD 120
Query: 558 VCTELLPLIKPQGRVVNVSSTESVRALNNCSPELQQKFKSETITEEELVGLMNKFVEDTK 737
VC E+LPLIKPQGRVVNVSS S+ AL +CSPELQQKF+SETITEEELVGLMNK+VED K
Sbjct: 121 VCKEMLPLIKPQGRVVNVSSMVSLSALKDCSPELQQKFRSETITEEELVGLMNKYVEDAK 180
Query: 738 NGVHKKEGWPSTAYGVTKIGVTVLSRIYARKLSEQRAGDKILLNACCPGWVRTDMAGPKA 917
GV+ KE WP++AY V+KIGVTVLSRI ARKL+EQR GDKILLNACCPGWVRTDM GP+A
Sbjct: 181 KGVYVKEDWPNSAYEVSKIGVTVLSRILARKLNEQRRGDKILLNACCPGWVRTDMTGPQA 240
Query: 918 PKSPEEGAETPVYLALLPSDAEGPHGQFVSEKKVVEW 1028
KSPEEGAETPVYLALLP DAEGPHGQFV +K V W
Sbjct: 241 TKSPEEGAETPVYLALLPPDAEGPHGQFVQDKTVEPW 277
>ref|XP_359206.3| PREDICTED: similar to Carbonyl reductase [NADPH] 1 (NADPH-dependent
carbonyl reductase 1) [Mus musculus]
Length = 277
Score = 420 bits (1079), Expect = e-117
Identities = 211/277 (76%), Positives = 230/277 (83%)
Frame = +3
Query: 198 MSSNIRVAVVTGGNKGIGLANVRDLCQQFSGDVMLTARDXXXXXXXXXXXXXEGLSPRFH 377
M S R+A+VTG NKGIG A RDLCQQFSGDV+LTARD EGL PRFH
Sbjct: 1 MPSCSRIALVTGANKGIGFAITRDLCQQFSGDVVLTARDEARGLAAVQKLQAEGLIPRFH 60
Query: 378 QLDIDDLRSIQALRDFLLKEYGGLNVLVNNAGIAFKTVDPTPFHIQAEVTMKTNFLGTRN 557
QLDI+D +SI ALR+FLLKEYGGL+VLVNNAGIA+K D T FHI E MKTNF GT+
Sbjct: 61 QLDINDPQSIHALRNFLLKEYGGLDVLVNNAGIAYKGTDLTHFHILREAAMKTNFFGTQA 120
Query: 558 VCTELLPLIKPQGRVVNVSSTESVRALNNCSPELQQKFKSETITEEELVGLMNKFVEDTK 737
VCTELLPLIK QGRVVN+SS S+ AL NCS ELQQKF+SETITEEELVGLMNKFVEDTK
Sbjct: 121 VCTELLPLIKTQGRVVNISSLISLEALKNCSLELQQKFRSETITEEELVGLMNKFVEDTK 180
Query: 738 NGVHKKEGWPSTAYGVTKIGVTVLSRIYARKLSEQRAGDKILLNACCPGWVRTDMAGPKA 917
GVH KEGWP++AYGV+KIGVTVLSRI ARKL+EQR GDKILLNACCPGWVRTDMAGP+A
Sbjct: 181 KGVHAKEGWPNSAYGVSKIGVTVLSRILARKLNEQRRGDKILLNACCPGWVRTDMAGPQA 240
Query: 918 PKSPEEGAETPVYLALLPSDAEGPHGQFVSEKKVVEW 1028
KSPEEGAETPVYLALLP DAEGPHGQFV +KKV +W
Sbjct: 241 TKSPEEGAETPVYLALLPPDAEGPHGQFVQDKKVEQW 277
>ref|NP_766635.1| carbonyl reductase 3 [Mus musculus]
Length = 277
Score = 385 bits (988), Expect = e-107
Identities = 188/277 (67%), Positives = 222/277 (80%)
Frame = +3
Query: 198 MSSNIRVAVVTGGNKGIGLANVRDLCQQFSGDVMLTARDXXXXXXXXXXXXXEGLSPRFH 377
MSS RVA+VTG NKGIG A RDLC++FSGDV+LTARD EGLSPRFH
Sbjct: 1 MSSCSRVALVTGANKGIGFAITRDLCRKFSGDVVLTARDEARGRAAVQQLQAEGLSPRFH 60
Query: 378 QLDIDDLRSIQALRDFLLKEYGGLNVLVNNAGIAFKTVDPTPFHIQAEVTMKTNFLGTRN 557
QLDIDD +SI+ALRDFL KEYGGLNVLVNNAGIAF+ DPTPF IQAEVT+KTNF TRN
Sbjct: 61 QLDIDDPQSIRALRDFLRKEYGGLNVLVNNAGIAFRMDDPTPFDIQAEVTLKTNFFATRN 120
Query: 558 VCTELLPLIKPQGRVVNVSSTESVRALNNCSPELQQKFKSETITEEELVGLMNKFVEDTK 737
VCTELLP++KP GRVVN+SS + ++AL NC +LQ+KF+ +T+TE +LV LM KFVEDTK
Sbjct: 121 VCTELLPIMKPHGRVVNISSLQGLKALENCREDLQEKFRCDTLTEVDLVDLMKKFVEDTK 180
Query: 738 NGVHKKEGWPSTAYGVTKIGVTVLSRIYARKLSEQRAGDKILLNACCPGWVRTDMAGPKA 917
N VH++EGWP +AYGV+K+GVTVL+RI AR+L E+R D+ILLNACCPGWV+TDMA +
Sbjct: 181 NEVHEREGWPDSAYGVSKLGVTVLTRILARQLDEKRKADRILLNACCPGWVKTDMARDQG 240
Query: 918 PKSPEEGAETPVYLALLPSDAEGPHGQFVSEKKVVEW 1028
++ EEGAETPVYLALLP DA PHGQ V +K V W
Sbjct: 241 SRTVEEGAETPVYLALLPPDATEPHGQLVRDKVVQTW 277
>ref|NP_780581.1| retinol dehydrogenase 13 (all-trans and 9-cis) [Mus musculus]
Length = 334
Score = 61.6 bits (148), Expect = 1e-09
Identities = 76/275 (27%), Positives = 118/275 (42%), Gaps = 24/275 (8%)
Frame = +3
Query: 213 RVAVVTGGNKGIGLANVRDLCQQFSGDVMLTARDXXXXXXXXXXXXXEGLSPRFH--QLD 386
+ +VTG N GIG +L ++ G+V+L RD E L+PR +LD
Sbjct: 39 KTVIVTGANTGIGKQTALELAKR-GGNVILACRDMEKCEVAAKDIRGETLNPRVRAERLD 97
Query: 387 IDDLRSIQALRDFLLKEYGGLNVLVNNAGIA----FKTVDPTPFHIQAEVTMKTNFLGTR 554
+ L+SI+ ++KE +++LVNNA + + T D F +Q V +FL T
Sbjct: 98 LASLKSIREFARKVIKEEERVDILVNNAAVMRCPHWTTED--GFEMQFGVNYLGHFLLT- 154
Query: 555 NVCTELLPLIKPQGRVVNVSSTESVRALNNCSPELQQKFKSETITEEELVGLMNKFVEDT 734
N+ + L P R++N+SS V + I E+L M K+ DT
Sbjct: 155 NLLLDKLKASAP-SRIINLSSLAHV---------------AGHIDFEDLNWQMKKY--DT 196
Query: 735 KNGVHKKEGWPSTAYGVTKIGVTVLSRIYARKLSEQRAGDKILLNACCPGWVRTD----- 899
K AY +K+ V ++ ++LS + G + +NA PG RT+
Sbjct: 197 K-----------AAYCQSKLAVV----LFTKELSHRLQGSGVTVNALHPGVARTELGRHT 241
Query: 900 ----------MAGP---KAPKSPEEGAETPVYLAL 965
M GP KSP+ A+ YLA+
Sbjct: 242 GMHNSAFSGFMLGPFFWLLFKSPQLAAQPSTYLAV 276
>ref|NP_084293.1| retinol dehydrogenase 12 [Mus musculus]
Length = 316
Score = 52.4 bits (124), Expect = 9e-07
Identities = 71/288 (24%), Positives = 117/288 (40%), Gaps = 20/288 (6%)
Frame = +3
Query: 213 RVAVVTGGNKGIGLANVRDLCQQFSGDVMLTARDXXXXXXXXXXXXXEGLSPRF--HQLD 386
+V V+TG N GIG R+L ++ V + RD + + + +LD
Sbjct: 40 KVVVITGANTGIGKETARELARR-GARVYIACRDVLKGESAASEIRADTKNSQVLVRKLD 98
Query: 387 IDDLRSIQALRDFLLKEYGGLNVLVNNAGIAF----KTVDPTPFHIQAEVTMKTNFLGTR 554
+ D +SI+A + L E L++L+NNAG+ KT D H N LG
Sbjct: 99 LSDTKSIRAFAERFLAEEKKLHILINNAGVMMCPYSKTTDGFETH------FGVNHLGHF 152
Query: 555 NVCTELLPLIKPQ--GRVVNVSSTESVRALNNCSPELQQKFKSETITEEELVGLMNKFVE 728
+ LL +K RVVN+SS + L+ K
Sbjct: 153 LLTYLLLERLKESAPARVVNLSS---------------------------IAHLIGKIRF 185
Query: 729 DTKNGVHKKEGWPSTAYGVTKIGVTVLSRIYARKLSEQRAGDKILLNACCPGWVRTDMAG 908
G +K + AYG +K+ + ++ R+L+++ G + A PG V +++
Sbjct: 186 HDLQG--QKRYCSAFAYGHSKLA----NLLFTRELAKRLQGTGVTAYAVHPGVVLSEITR 239
Query: 909 PK----------AP--KSPEEGAETPVYLALLPSDAEGPHGQFVSEKK 1016
+P KS +GA+T ++ A L D E G++ S+ K
Sbjct: 240 NSYLLCLLWRLFSPFFKSTSQGAQTSLHCA-LAEDLEPLSGKYFSDCK 286
>ref|NP_067532.2| short-chain dehydrogenase/reductase 1 [Mus musculus]
Length = 316
Score = 52.0 bits (123), Expect = 1e-06
Identities = 49/143 (34%), Positives = 65/143 (45%), Gaps = 8/143 (5%)
Frame = +3
Query: 213 RVAVVTGGNKGIGLANVRDLCQQFSGDVMLTARDXXXXXXXXXXXXX-EGLSPRF-HQLD 386
+VA+VTG N GIG +DL Q+ V L RD G S F +LD
Sbjct: 39 KVAIVTGANTGIGKETAKDLAQR-GARVYLACRDVDKGELAAREIQAVTGNSQVFVRKLD 97
Query: 387 IDDLRSIQALRDFLLKEYGGLNVLVNNAGIAF----KTVDPTPFHIQAEVTMKTNFLGTR 554
+ D +SI+A L E L++L+NNAG+ KT D HI N LG
Sbjct: 98 LADTKSIRAFAKDFLAEEKHLHLLINNAGVMMCPYSKTADGFEMHI------GVNHLGHF 151
Query: 555 NVCTELLPLIKPQ--GRVVNVSS 617
+ LL +K R+VN+SS
Sbjct: 152 LLTHLLLEKLKESAPSRIVNLSS 174
Database: RefSeqMP
Posted date: Aug 2, 2006 12:58 AM
Number of letters in database: 21,768,885
Number of sequences in database: 45,328
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 55,481,863
Number of Sequences: 45328
Number of extensions: 1502455
Number of successful extensions: 6363
Number of sequences better than 1.0e-05: 8
Number of HSP's better than 0.0 without gapping: 5318
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6331
length of database: 21,768,885
effective HSP length: 105
effective length of database: 17,009,445
effective search space used: 4677597375
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)