Animal-Genome cDNA TES01_0047_C11


Search to RefSeqBP

BLASTX 2.2.10 [Oct-19-2004]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TES01_0047_C11
         (1142 letters)

Database: RefSeqBP 
           33,508 sequences; 16,112,626 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_001029685.1| carbonyl reductase 1 [Bos taurus]                 452   e-127
Alignment   gi|XP_874747.1| PREDICTED: similar to Carbonyl reductase [NADPH...   446   e-125
Alignment   gi|NP_001030258.1| 20-beta-hydroxysteroid dehydrogenase-like [B...   419   e-117
Alignment   gi|XP_869745.1| PREDICTED: similar to carbonyl reductase 3 isof...   399   e-111
Alignment   gi|XP_868956.1| PREDICTED: similar to Carbonyl reductase [NADPH...   266   3e-71
Alignment   gi|XP_878838.1| PREDICTED: similar to carbonyl reductase 3 isof...   248   5e-66
Alignment   gi|XP_594165.2| PREDICTED: similar to carbonyl reductase 3 isof...   248   5e-66
Alignment   gi|XP_583859.2| PREDICTED: similar to short chain dehydrogenase...    62   1e-09
Alignment   gi|XP_592820.2| PREDICTED: similar to retinol dehydrogenase 11 ...    57   2e-08
Alignment   gi|NP_899207.1| double substrate-specificity short chain dehydr...    50   3e-06

>ref|NP_001029685.1| carbonyl reductase 1 [Bos taurus]
          Length = 277

 Score =  452 bits (1164), Expect = e-127
 Identities = 225/277 (81%), Positives = 242/277 (87%)
 Frame = +3

Query: 198  MSSNIRVAVVTGGNKGIGLANVRDLCQQFSGDVMLTARDXXXXXXXXXXXXXEGLSPRFH 377
            MSS+  VA+VTG NKGIG   VRDLC++FSGDV+LTARD             EGLSP FH
Sbjct: 1    MSSSNCVALVTGANKGIGFVIVRDLCRRFSGDVVLTARDEARGRAAVQQLQAEGLSPLFH 60

Query: 378  QLDIDDLRSIQALRDFLLKEYGGLNVLVNNAGIAFKTVDPTPFHIQAEVTMKTNFLGTRN 557
            QLDIDD +SI+ALRDFL KEYGGL+VLVNNAGIAFKT D TPFHIQAEVTMKTNF GTR+
Sbjct: 61   QLDIDDRQSIRALRDFLRKEYGGLDVLVNNAGIAFKTADTTPFHIQAEVTMKTNFFGTRD 120

Query: 558  VCTELLPLIKPQGRVVNVSSTESVRALNNCSPELQQKFKSETITEEELVGLMNKFVEDTK 737
            VCTELLPLIKPQGRVVNVSS  SV +L  CS ELQQKF+SETITEEELVGLMNKFVEDTK
Sbjct: 121  VCTELLPLIKPQGRVVNVSSFVSVNSLKKCSRELQQKFRSETITEEELVGLMNKFVEDTK 180

Query: 738  NGVHKKEGWPSTAYGVTKIGVTVLSRIYARKLSEQRAGDKILLNACCPGWVRTDMAGPKA 917
            NGVH+KEGWP TAYGVTKIGVTVLSRI+ARKLSEQR GDKILLNACCPGWVRTDM GPKA
Sbjct: 181  NGVHRKEGWPDTAYGVTKIGVTVLSRIHARKLSEQRGGDKILLNACCPGWVRTDMGGPKA 240

Query: 918  PKSPEEGAETPVYLALLPSDAEGPHGQFVSEKKVVEW 1028
             KSPEEGAETPVYLALLPSDAEGPHG+F+SEK+VV+W
Sbjct: 241  SKSPEEGAETPVYLALLPSDAEGPHGEFISEKRVVQW 277


>ref|XP_874747.1| PREDICTED: similar to Carbonyl reductase [NADPH] 1 (NADPH-dependent
            carbonyl reductase 1) (Prostaglandin-E(2) 9-reductase)
            (Prostaglandin 9-ketoreductase) (15-hydroxyprostaglandin
            dehydrogenase [NADP+]) [Bos taurus]
          Length = 277

 Score =  446 bits (1148), Expect = e-125
 Identities = 222/277 (80%), Positives = 239/277 (86%)
 Frame = +3

Query: 198  MSSNIRVAVVTGGNKGIGLANVRDLCQQFSGDVMLTARDXXXXXXXXXXXXXEGLSPRFH 377
            MSS+ RVA+VTG NKG+G A VR L   F GDV+LTA D             +GLSP FH
Sbjct: 1    MSSSTRVALVTGANKGLGFAIVRALAGGFQGDVVLTAPDEAQGRAAVQQLQAQGLSPLFH 60

Query: 378  QLDIDDLRSIQALRDFLLKEYGGLNVLVNNAGIAFKTVDPTPFHIQAEVTMKTNFLGTRN 557
            QLDIDD +SI+ALRDFL KEYGGL+VLVNNAGIAFKT D TPFHIQAEVTMKTNF GTR+
Sbjct: 61   QLDIDDRQSIRALRDFLRKEYGGLDVLVNNAGIAFKTADTTPFHIQAEVTMKTNFFGTRD 120

Query: 558  VCTELLPLIKPQGRVVNVSSTESVRALNNCSPELQQKFKSETITEEELVGLMNKFVEDTK 737
            VCTELLPLIKPQGRVVNVSS+ SV +L  CSPELQQKF+SETITEEELVGLMNKFVEDTK
Sbjct: 121  VCTELLPLIKPQGRVVNVSSSVSVSSLKKCSPELQQKFQSETITEEELVGLMNKFVEDTK 180

Query: 738  NGVHKKEGWPSTAYGVTKIGVTVLSRIYARKLSEQRAGDKILLNACCPGWVRTDMAGPKA 917
            NGVH+KEGWP TAYGVTKIGVTVLSRI+ARK+SEQR GDKILLNACCPGWVRTDM GPKA
Sbjct: 181  NGVHRKEGWPDTAYGVTKIGVTVLSRIHARKMSEQRGGDKILLNACCPGWVRTDMGGPKA 240

Query: 918  PKSPEEGAETPVYLALLPSDAEGPHGQFVSEKKVVEW 1028
            PKSPEEGAETPVYLALLP DAEGPHGQFV EK+VV+W
Sbjct: 241  PKSPEEGAETPVYLALLPPDAEGPHGQFVHEKEVVQW 277


>ref|NP_001030258.1| 20-beta-hydroxysteroid dehydrogenase-like [Bos taurus]
          Length = 286

 Score =  419 bits (1076), Expect = e-117
 Identities = 211/286 (73%), Positives = 234/286 (81%), Gaps = 1/286 (0%)
 Frame = +3

Query: 198  MSSNIRVAVVTGGNKGIGLANVRDLCQQFSGDVMLTARDXXXXXXXXXXXXXEGLSPRFH 377
            MSS+ RVA+VTG NKG+G A VRDLC++F GDV+LTARD             EGLSPRFH
Sbjct: 1    MSSSTRVALVTGANKGLGFAIVRDLCRRFPGDVVLTARDEARGRAAVQQLQAEGLSPRFH 60

Query: 378  QLDIDDLRSIQALRDFLLKEYGGLNVLVNNAGIAFKTVDPTPFHIQAEVTMKTNFLGTRN 557
            QLDI DL+SI ALRDFL KEYGGL+VLVNNA IAF+  DPTP  I+AE+TMKTNF GTR+
Sbjct: 61   QLDITDLQSIHALRDFLRKEYGGLDVLVNNAAIAFQLSDPTPTPIKAEMTMKTNFFGTRD 120

Query: 558  VCTELLPLIKPQGRVVNVSSTESVRALNNCSPELQQKFKSETITEEELVGLMNKFVEDTK 737
            +CTELLPL+KPQGRVVN+SS    +AL +CSPELQQK +SETITEEELVGLMNKFVEDTK
Sbjct: 121  ICTELLPLMKPQGRVVNMSSGWGFKALESCSPELQQKLRSETITEEELVGLMNKFVEDTK 180

Query: 738  NGVHKKEGWP-STAYGVTKIGVTVLSRIYARKLSEQRAGDKILLNACCPGWVRTDMAGPK 914
            NGVH+KEGWP +  YGV KIG+T LSRI ARKLSEQR GDKILLNACCPGWVRTDM G K
Sbjct: 181  NGVHRKEGWPDNNIYGVAKIGITALSRIQARKLSEQRGGDKILLNACCPGWVRTDMGGSK 240

Query: 915  APKSPEEGAETPVYLALLPSDAEGPHGQFVSEKKVVEWGVPP*SYP 1052
            A KS EEG ETP+YLALLPSDAEGPHGQFV EKKV +W   P  YP
Sbjct: 241  AFKSLEEGIETPMYLALLPSDAEGPHGQFVHEKKVAKWQFLPEFYP 286


>ref|XP_869745.1| PREDICTED: similar to carbonyl reductase 3 isoform 2 [Bos taurus]
          Length = 277

 Score =  399 bits (1024), Expect = e-111
 Identities = 194/277 (70%), Positives = 226/277 (81%)
 Frame = +3

Query: 198  MSSNIRVAVVTGGNKGIGLANVRDLCQQFSGDVMLTARDXXXXXXXXXXXXXEGLSPRFH 377
            MSS  RVA+VTG NKGIG A  RDLC++F GDV+LTARD             EGLSPRFH
Sbjct: 1    MSSYTRVALVTGANKGIGFAIARDLCREFPGDVVLTARDKARGRAAVQQLQAEGLSPRFH 60

Query: 378  QLDIDDLRSIQALRDFLLKEYGGLNVLVNNAGIAFKTVDPTPFHIQAEVTMKTNFLGTRN 557
            QLDIDDL+SI+ALRDFL KEYGGLNVLVNNAGIAFKT DPTPF IQAE+T+KTNF  TRN
Sbjct: 61   QLDIDDLQSIRALRDFLRKEYGGLNVLVNNAGIAFKTDDPTPFDIQAEMTLKTNFFATRN 120

Query: 558  VCTELLPLIKPQGRVVNVSSTESVRALNNCSPELQQKFKSETITEEELVGLMNKFVEDTK 737
            VCTELLP++KP GRVVNVSS++  +AL NCS +LQ+KF+ ET+TEE+LV LM KFVEDTK
Sbjct: 121  VCTELLPIVKPHGRVVNVSSSQGSQALENCSEDLQEKFRCETLTEEDLVDLMKKFVEDTK 180

Query: 738  NGVHKKEGWPSTAYGVTKIGVTVLSRIYARKLSEQRAGDKILLNACCPGWVRTDMAGPKA 917
            N VH++EGWP++AYGV+K+GVTVLSRI AR+L E+R  D+ILLNACCPGWV+TD+ G  A
Sbjct: 181  NEVHEREGWPNSAYGVSKLGVTVLSRILARRLEEKRKADRILLNACCPGWVKTDLGGAHA 240

Query: 918  PKSPEEGAETPVYLALLPSDAEGPHGQFVSEKKVVEW 1028
             ++ EEGAETPVYLALLP DA  PHGQ V +K V  W
Sbjct: 241  SRTVEEGAETPVYLALLPPDATEPHGQLVRDKVVQNW 277


>ref|XP_868956.1| PREDICTED: similar to Carbonyl reductase [NADPH] 1 (NADPH-dependent
            carbonyl reductase 1) (Prostaglandin-E(2) 9-reductase)
            (Prostaglandin 9-ketoreductase) (15-hydroxyprostaglandin
            dehydrogenase [NADP+]) [Bos taurus]
          Length = 327

 Score =  266 bits (679), Expect = 3e-71
 Identities = 165/309 (53%), Positives = 194/309 (62%), Gaps = 6/309 (1%)
 Frame = +3

Query: 216  VAVVTGGNKGIGLANVRDLCQQFSGDVMLTARDXXXXXXXXXXXXXEGLSPRFHQLDIDD 395
            +A+VTG NKGIGLA +           +L                  G + R   L   +
Sbjct: 1    MALVTGANKGIGLAVL-----------LLGGAGTGDRGCIHIRAAPRGSARRPPPLSFHE 49

Query: 396  LRSIQALRDFLLKEYGGLNVLVNNAGIA---FKTVDPTPFHIQAEVTMKTNFLGTRNVCT 566
             R +           GG       AGI+       D TPF IQAEVTMKTNF GTR VCT
Sbjct: 50   WRPL-----------GGSPA----AGISTHWISAADTTPFPIQAEVTMKTNFFGTRVVCT 94

Query: 567  ELLPLIKPQGRVVNVSSTESVRALNNCSPELQQKFKSETITEEELVGLMNKFVEDTKNGV 746
            ELLPL+KPQGRVVNVSS+ SV +L  CSPELQQKF+SETITEEELVGLMNKFVEDTKNGV
Sbjct: 95   ELLPLLKPQGRVVNVSSSVSVTSLKKCSPELQQKFQSETITEEELVGLMNKFVEDTKNGV 154

Query: 747  HKKEGWPSTAYGVTKIGVTVLSRIYARKLSEQRAGDKILLNACCPGWVRTD--MAGPKAP 920
            H+KEGW  TAYGVTKIGVTVL RI+ARKLSEQR GDKILLNACCPGWVRT+      KA 
Sbjct: 155  HRKEGWRDTAYGVTKIGVTVLFRIHARKLSEQRGGDKILLNACCPGWVRTNKGRGRHKAL 214

Query: 921  KSPEEGAETP-VYLALLPSDAEGPHGQFVSEKKVVEWGVPP*SYPWVNA*FVS*FHQKDT 1097
            ++P+EGAETP ++   +P  +     Q V E+KVV       ++  +   F+S  +Q DT
Sbjct: 215  RAPKEGAETPWLFCPRMPRGS----SQVVFERKVVCALTDSCTHGLIM--FLSQVYQSDT 268

Query: 1098 YTIKNIPVQ 1124
            YT+ NIP Q
Sbjct: 269  YTVANIPTQ 277


>ref|XP_878838.1| PREDICTED: similar to carbonyl reductase 3 isoform 3 [Bos taurus]
          Length = 169

 Score =  248 bits (634), Expect = 5e-66
 Identities = 115/169 (68%), Positives = 141/169 (83%)
 Frame = +3

Query: 522  VTMKTNFLGTRNVCTELLPLIKPQGRVVNVSSTESVRALNNCSPELQQKFKSETITEEEL 701
            +T+KTNF  TRNVCTELLP++KP GRVVNVSS++  +AL NCS +LQ+KF+ ET+TEE+L
Sbjct: 1    MTLKTNFFATRNVCTELLPIVKPHGRVVNVSSSQGSQALENCSEDLQEKFRCETLTEEDL 60

Query: 702  VGLMNKFVEDTKNGVHKKEGWPSTAYGVTKIGVTVLSRIYARKLSEQRAGDKILLNACCP 881
            V LM KFVEDTKN VH++EGWP++AYGV+K+GVTVLSRI AR+L E+R  D+ILLNACCP
Sbjct: 61   VDLMKKFVEDTKNEVHEREGWPNSAYGVSKLGVTVLSRILARRLEEKRKADRILLNACCP 120

Query: 882  GWVRTDMAGPKAPKSPEEGAETPVYLALLPSDAEGPHGQFVSEKKVVEW 1028
            GWV+TD+ G  A ++ EEGAETPVYLALLP DA  PHGQ V +K V  W
Sbjct: 121  GWVKTDLGGAHASRTVEEGAETPVYLALLPPDATEPHGQLVRDKVVQNW 169


>ref|XP_594165.2| PREDICTED: similar to carbonyl reductase 3 isoform 1 [Bos taurus]
          Length = 169

 Score =  248 bits (634), Expect = 5e-66
 Identities = 115/169 (68%), Positives = 141/169 (83%)
 Frame = +3

Query: 522  VTMKTNFLGTRNVCTELLPLIKPQGRVVNVSSTESVRALNNCSPELQQKFKSETITEEEL 701
            +T+KTNF  TRNVCTELLP++KP GRVVNVSS++  +AL NCS +LQ+KF+ ET+TEE+L
Sbjct: 1    MTLKTNFFATRNVCTELLPIVKPHGRVVNVSSSQGSQALENCSEDLQEKFRCETLTEEDL 60

Query: 702  VGLMNKFVEDTKNGVHKKEGWPSTAYGVTKIGVTVLSRIYARKLSEQRAGDKILLNACCP 881
            V LM KFVEDTKN VH++EGWP++AYGV+K+GVTVLSRI AR+L E+R  D+ILLNACCP
Sbjct: 61   VDLMKKFVEDTKNEVHEREGWPNSAYGVSKLGVTVLSRILARRLEEKRKADRILLNACCP 120

Query: 882  GWVRTDMAGPKAPKSPEEGAETPVYLALLPSDAEGPHGQFVSEKKVVEW 1028
            GWV+TD+ G  A ++ EEGAETPVYLALLP DA  PHGQ V +K V  W
Sbjct: 121  GWVKTDLGGAHASRTVEEGAETPVYLALLPPDATEPHGQLVRDKVVQNW 169


>ref|XP_583859.2| PREDICTED: similar to short chain dehydrogenase/reductase [Bos
            taurus]
          Length = 317

 Score = 61.6 bits (148), Expect = 1e-09
 Identities = 74/290 (25%), Positives = 114/290 (39%), Gaps = 15/290 (5%)
 Frame = +3

Query: 213  RVAVVTGGNKGIGLANVRDLCQQFSGDVMLTARDXXXXXXXXXXXXXEGLSPRFHQLDID 392
            R  +VTGGN GIG A   ++ ++  G V L  RD             E  +     L I 
Sbjct: 41   RAFMVTGGNSGIGKATAMEIAKR-GGTVHLVCRDHSRAEGAKAEIIRESGNQNIF-LHIV 98

Query: 393  DLRSIQALRDFL--LKEYGGLNVLVNNAGIAFKTVDPTPFHIQAEVTMKTNFLGTRNVCT 566
            DL   +++  F+   K+   LNVL+NNAG      + T   +  E    TN LG   + T
Sbjct: 99   DLSLPKSVWKFVENFKQEHTLNVLINNAGCMVNKRELTEDGL--EKNFATNTLGVYVLTT 156

Query: 567  ELLPLIKPQG--RVVNVSSTES-VRALNNCSPELQQKFKSETITEEELVGLMNKFVEDTK 737
             L+P+++ +   RV+ VSS    V+ LN   P+ ++     T+           + ++ +
Sbjct: 157  ALIPVLEKEHDPRVITVSSGGMLVQKLNTDDPQSERTAFDGTMV----------YAQNKR 206

Query: 738  NGVHKKEGWPSTAYGVTKIGVTVLSRIYARKLSEQRAGDKILLNACCPGWVRTDMAGPKA 917
              V   E W                          RA   I  +   PGWV T       
Sbjct: 207  QQVVLTERWA-------------------------RAHPAIHFSCMHPGWVDTPGVRLSM 241

Query: 918  P----------KSPEEGAETPVYLALLPSDAEGPHGQFVSEKKVVEWGVP 1037
            P          +S  +GA+T ++LAL P+    P G F  ++K     +P
Sbjct: 242  PGFHARLGARLRSEAQGADTVLWLALAPAATAQPSGCFFQDRKPAPTHLP 291


>ref|XP_592820.2| PREDICTED: similar to retinol dehydrogenase 11 (predicted) [Bos
            taurus]
          Length = 377

 Score = 57.4 bits (137), Expect = 2e-08
 Identities = 80/311 (25%), Positives = 122/311 (39%), Gaps = 19/311 (6%)
 Frame = +3

Query: 165  PCRGTAAPLPTMSSNIRVAVVTGGNKGIGLANVRDLCQQFSGDVMLTARDXXXXXXXXXX 344
            PCRG A      S   R AVVTG N GIG     +L ++    V+L  R           
Sbjct: 27   PCRGLA------SLRGRTAVVTGANSGIGKMTALELARR-GARVVLACRSRERGEAAAFD 79

Query: 345  XXXEGLSPR--FHQLDIDDLRSIQALRDFLLKEYGGLNVLVNNAGIAFKTVDPTPFHIQA 518
               E  +    F  LD+  L S++A     L     L++L++NAGI+       PF++  
Sbjct: 80   LRQESGNNEVIFMALDLASLASVRAFATAFLSSEPRLDILIHNAGISSCGRTREPFNL-- 137

Query: 519  EVTMKTNFLGTRNVCTELLPLIKPQ--GRVVNVSSTESVRALNNCSPELQQKFKSETITE 692
               ++ N +G   +   LLP +K     RVV VSS    R   +            T  +
Sbjct: 138  --LLRVNHIGPFLLTHLLLPRLKTSAPSRVVVVSSAAHRRGRLDF-----------TRLD 184

Query: 693  EELVGLMNKFVEDTKNGVHKKEGWPSTAYGVTKIGVTVLSRIYARKLSEQRAGDKILLNA 872
              +VG   +                  AY  +K+     + ++AR+L+ Q  G  +   A
Sbjct: 185  HPVVGWQQEL----------------RAYANSKLA----NVLFARELATQLEGTGVTCYA 224

Query: 873  CCPGWVRTDMAGPKAP---------------KSPEEGAETPVYLALLPSDAEGPHGQFVS 1007
              PG V +++     P               ++P  GA+TP+Y A L    E   G++ +
Sbjct: 225  AHPGPVNSELFLRHVPGWLRPLLRPLAWLVLRAPRGGAQTPLYCA-LQEGIEPLSGRYFA 283

Query: 1008 EKKVVEWGVPP 1040
               V E  VPP
Sbjct: 284  NCHVEE--VPP 292


>ref|NP_899207.1| double substrate-specificity short chain dehydrogenase/reductase 2
           [Bos taurus]
          Length = 316

 Score = 50.4 bits (119), Expect = 3e-06
 Identities = 43/143 (30%), Positives = 65/143 (45%), Gaps = 8/143 (5%)
 Frame = +3

Query: 213 RVAVVTGGNKGIGLANVRDLCQQFSGDVMLTARDXXXXXXXXXXXXXEGLSPRF--HQLD 386
           +V V+TG N GIG    R+L ++    V +  RD             +  + +    +LD
Sbjct: 40  KVVVITGANTGIGKETARELARR-GARVYIACRDVLKGESAASEIQADTKNSQVLVRKLD 98

Query: 387 IDDLRSIQALRDFLLKEYGGLNVLVNNAGIAF----KTVDPTPFHIQAEVTMKTNFLGTR 554
           + D +SI+A  +  L E   L++L+NNAG+      KT D    H      +  N LG  
Sbjct: 99  LSDTKSIRAFAEGFLAEEKQLHILINNAGVMLCPYSKTADGFETH------LAVNHLGHF 152

Query: 555 NVCTELLPLIKPQ--GRVVNVSS 617
            +   LL  +K     RVVN+SS
Sbjct: 153 LLTHLLLGRLKESAPARVVNLSS 175


  Database: RefSeqBP
    Posted date:  Aug 1, 2006  7:14 PM
  Number of letters in database: 16,112,626
  Number of sequences in database:  33,508
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 41,321,928
Number of Sequences: 33508
Number of extensions: 1126923
Number of successful extensions: 4879
Number of sequences better than 1.0e-05: 10
Number of HSP's better than  0.0 without gapping: 4152
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4854
length of database: 16,112,626
effective HSP length: 103
effective length of database: 12,661,302
effective search space used: 3507180654
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

Search to RefSeqCP

BLASTX 2.2.10 [Oct-19-2004]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TES01_0047_C11
         (1142 letters)

Database: RefSeqCP 
           33,732 sequences; 19,266,565 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|XP_852675.1| PREDICTED: similar to Carbonyl reductase [NADPH...   453   e-127
Alignment   gi|XP_537903.1| PREDICTED: similar to Carbonyl reductase [NADPH...   419   e-117
Alignment   gi|XP_535589.2| PREDICTED: similar to Carbonyl reductase [NADPH...   412   e-115
Alignment   gi|XP_544873.2| PREDICTED: similar to carbonyl reductase 3 [Can...   406   e-113
Alignment   gi|XP_533000.2| PREDICTED: similar to Retinol dehydrogenase 12 ...    54   2e-07
Alignment   gi|XP_854354.1| PREDICTED: similar to Retinol dehydrogenase 11 ...    52   8e-07
Alignment   gi|XP_547866.2| PREDICTED: similar to retinol dehydrogenase 12 ...    50   3e-06

>ref|XP_852675.1| PREDICTED: similar to Carbonyl reductase [NADPH] 1 (NADPH-dependent
            carbonyl reductase 1) (Prostaglandin-E(2) 9-reductase)
            (Prostaglandin 9-ketoreductase) (15-hydroxyprostaglandin
            dehydrogenase [NADP+]) [Canis familiaris]
          Length = 277

 Score =  453 bits (1165), Expect = e-127
 Identities = 224/277 (80%), Positives = 242/277 (87%)
 Frame = +3

Query: 198  MSSNIRVAVVTGGNKGIGLANVRDLCQQFSGDVMLTARDXXXXXXXXXXXXXEGLSPRFH 377
            MS+  RVA+VTG NKGIG A  R+LC+QFSGDV+LTARD             EGLSPRFH
Sbjct: 1    MSAASRVALVTGANKGIGFAIARELCRQFSGDVVLTARDEARGRAAVQQLQAEGLSPRFH 60

Query: 378  QLDIDDLRSIQALRDFLLKEYGGLNVLVNNAGIAFKTVDPTPFHIQAEVTMKTNFLGTRN 557
             LDIDDL+SI+ALRDFL KEYGGL+VLVNNAGIAFKT DPTPFHIQAEVTMKTNF GTR+
Sbjct: 61   LLDIDDLQSIRALRDFLRKEYGGLDVLVNNAGIAFKTNDPTPFHIQAEVTMKTNFFGTRD 120

Query: 558  VCTELLPLIKPQGRVVNVSSTESVRALNNCSPELQQKFKSETITEEELVGLMNKFVEDTK 737
            VCTELLPL+KPQGRVVNVSS  SVRAL +CSPELQQKF+SE ITEEELVGLMNKFVEDTK
Sbjct: 121  VCTELLPLMKPQGRVVNVSSVVSVRALKSCSPELQQKFRSEAITEEELVGLMNKFVEDTK 180

Query: 738  NGVHKKEGWPSTAYGVTKIGVTVLSRIYARKLSEQRAGDKILLNACCPGWVRTDMAGPKA 917
             GVH+ EGWP  AYGVTKIGVTVLSRI+ARKLSEQR  DKILLNACCPGWVRTDMAGP+A
Sbjct: 181  KGVHRNEGWPDNAYGVTKIGVTVLSRIHARKLSEQRRDDKILLNACCPGWVRTDMAGPRA 240

Query: 918  PKSPEEGAETPVYLALLPSDAEGPHGQFVSEKKVVEW 1028
            PKSPEEGAETPVYLALLPSDAEGPHG+F+ EKKV +W
Sbjct: 241  PKSPEEGAETPVYLALLPSDAEGPHGEFLMEKKVEQW 277


>ref|XP_537903.1| PREDICTED: similar to Carbonyl reductase [NADPH] 1 (NADPH-dependent
            carbonyl reductase 1) (Prostaglandin-E(2) 9-reductase)
            (Prostaglandin 9-ketoreductase) (15-hydroxyprostaglandin
            dehydrogenase [NADP+]) [Canis familiaris]
          Length = 296

 Score =  419 bits (1078), Expect = e-117
 Identities = 210/283 (74%), Positives = 231/283 (81%), Gaps = 3/283 (1%)
 Frame = +3

Query: 198  MSSNIRVAVVTGGNKGIGLANVRDLCQQFSGDVMLTARDXXXXXXXXXXXXXEGLSPRFH 377
            MS  +RVAVVTG NKG+G A  RDLC+ F GDV+LT+RD             EGLSPRFH
Sbjct: 1    MSLALRVAVVTGANKGLGFAITRDLCRNFPGDVILTSRDEARGRAAVQHLKAEGLSPRFH 60

Query: 378  QLDIDDLRSIQALRDFLLKEYGGLNVLVNNAGIAFKTVDPTPFHIQAEVTMKTNFLGTRN 557
             LDID+L+SI+ALRDFL +EYGGL+VLVNNAGI F   DPTP HIQAEVT+KTNF GTR+
Sbjct: 61   LLDIDNLQSIRALRDFLWEEYGGLDVLVNNAGIVFTPDDPTPLHIQAEVTLKTNFFGTRD 120

Query: 558  VCTELLPLIKPQGRVVNVSSTESVRALNNCSPELQQKFKSETITEEELVGLMNKFVEDTK 737
            +CTELLPL+KPQGRVVNVSS  S  AL  CSPELQQKF SETITEEEL  LMNKF+ED K
Sbjct: 121  ICTELLPLVKPQGRVVNVSSIMSFLALKQCSPELQQKFTSETITEEELGMLMNKFLEDVK 180

Query: 738  NGVHKKEGWPS---TAYGVTKIGVTVLSRIYARKLSEQRAGDKILLNACCPGWVRTDMAG 908
            NGVHKKEGWP     AY V+K+GVTVLSRI+ARKLSEQR  DKILLNACCPGWVRTDM G
Sbjct: 181  NGVHKKEGWPDIKIAAYSVSKMGVTVLSRIHARKLSEQRRDDKILLNACCPGWVRTDMGG 240

Query: 909  PKAPKSPEEGAETPVYLALLPSDAEGPHGQFVSEKKVVEWGVP 1037
            PK  KSPEEGAETPVYLALLPSDAEGPHG+FV EKKV +WG+P
Sbjct: 241  PKGIKSPEEGAETPVYLALLPSDAEGPHGEFVMEKKVEQWGLP 283


>ref|XP_535589.2| PREDICTED: similar to Carbonyl reductase [NADPH] 1 (NADPH-dependent
            carbonyl reductase 1) (Prostaglandin-E(2) 9-reductase)
            (Prostaglandin 9-ketoreductase) (15-hydroxyprostaglandin
            dehydrogenase [NADP+]) [Canis familiaris]
          Length = 292

 Score =  412 bits (1059), Expect = e-115
 Identities = 208/290 (71%), Positives = 228/290 (78%), Gaps = 3/290 (1%)
 Frame = +3

Query: 198  MSSNIRVAVVTGGNKGIGLANVRDLCQQFSGDVMLTARDXXXXXXXXXXXXXEGLSPRFH 377
            MSS  RVAVVTG NKG+G A +RDLC+ FSGDV+LTARD             +GLSPRFH
Sbjct: 1    MSSAPRVAVVTGANKGLGFAIMRDLCRNFSGDVVLTARDEARGRAAVQQLQSKGLSPRFH 60

Query: 378  QLDIDDLRSIQALRDFLLKEYGGLNVLVNNAGIAFKTVDPTPFHIQAEVTMKTNFLGTRN 557
             LDIDDL+SI  LRDFL KEY GL+VLVNNAGI F T DPTP  IQAEVT+KTNF GTRN
Sbjct: 61   LLDIDDLQSICTLRDFLCKEYRGLDVLVNNAGINFDTGDPTPLPIQAEVTLKTNFFGTRN 120

Query: 558  VCTELLPLIKPQGRVVNVSSTESVRALNNCSPELQQKFKSETITEEELVGLMNKFVEDTK 737
            VC ELLPL+KPQGRVVNVSS      L  CSPELQQKF SE ITEEEL  LMNKFVED K
Sbjct: 121  VCRELLPLMKPQGRVVNVSSVMGFVTLKQCSPELQQKFTSEAITEEELGMLMNKFVEDVK 180

Query: 738  NGVHKKEGWPS---TAYGVTKIGVTVLSRIYARKLSEQRAGDKILLNACCPGWVRTDMAG 908
            NGVHKKEGWP      YG++K+G+T+LSRI+ARKLSEQR GDKI LNACCPGW+RTDM G
Sbjct: 181  NGVHKKEGWPDMKLVTYGISKMGITILSRIHARKLSEQRRGDKIFLNACCPGWLRTDMGG 240

Query: 909  PKAPKSPEEGAETPVYLALLPSDAEGPHGQFVSEKKVVEWGVPP*SYPWV 1058
            PK  KSPEEGAETPVYLALLPSDAEGPHG+FV EKKV +WG+     PW+
Sbjct: 241  PKGIKSPEEGAETPVYLALLPSDAEGPHGEFVMEKKVEQWGLSFQFPPWI 290


>ref|XP_544873.2| PREDICTED: similar to carbonyl reductase 3 [Canis familiaris]
          Length = 484

 Score =  406 bits (1043), Expect = e-113
 Identities = 213/343 (62%), Positives = 251/343 (73%), Gaps = 2/343 (0%)
 Frame = +3

Query: 6    RPSAGGARAFALSPEARGESAASGHPT--HSASHRLPALRRPSASRLGETRPIRCPCRGT 179
            RP A  +R+   SP ++  S   G P+  H A+ R P  R P          +R P R  
Sbjct: 156  RPGAWFSRS--RSPGSQ-RSGLWGFPSCVHGAAARSPGARSP----------VRSP-RAP 201

Query: 180  AAPLPTMSSNIRVAVVTGGNKGIGLANVRDLCQQFSGDVMLTARDXXXXXXXXXXXXXEG 359
              PLP MSS  RVA+VTG N+GIG A  R+LC+QFSGDV+LTARD             EG
Sbjct: 202  GPPLPAMSSCSRVALVTGANRGIGFAIARELCRQFSGDVVLTARDEARGRAAVQQLQAEG 261

Query: 360  LSPRFHQLDIDDLRSIQALRDFLLKEYGGLNVLVNNAGIAFKTVDPTPFHIQAEVTMKTN 539
            LSPRFH LDIDDL+SI+ALRDFL KEYGGLNVLVNNAGIAFK  DPTPF IQAE+T+KTN
Sbjct: 262  LSPRFHLLDIDDLQSIRALRDFLRKEYGGLNVLVNNAGIAFKPDDPTPFDIQAEITLKTN 321

Query: 540  FLGTRNVCTELLPLIKPQGRVVNVSSTESVRALNNCSPELQQKFKSETITEEELVGLMNK 719
            F  TRNVC ELLP+IKP GRVVN+SS E  +AL NCS +LQ+KF+ ET+TEE+LV LM K
Sbjct: 322  FFATRNVCNELLPIIKPHGRVVNISSLEGSKALENCSADLQKKFQCETLTEEDLVDLMKK 381

Query: 720  FVEDTKNGVHKKEGWPSTAYGVTKIGVTVLSRIYARKLSEQRAGDKILLNACCPGWVRTD 899
            FVEDT N VH++EGWP++AYGV+K+GVTVLSRI A +L E+R  D+ILLNACCPGWV+TD
Sbjct: 382  FVEDTSNEVHEREGWPNSAYGVSKLGVTVLSRILAWRLDEKRKVDRILLNACCPGWVKTD 441

Query: 900  MAGPKAPKSPEEGAETPVYLALLPSDAEGPHGQFVSEKKVVEW 1028
            M GP  P++ EEGAETPVYLALLP DA  PHGQ V +K V+ W
Sbjct: 442  MGGPYGPRTVEEGAETPVYLALLPPDATEPHGQLVHDKVVLNW 484


>ref|XP_533000.2| PREDICTED: similar to Retinol dehydrogenase 12 [Canis familiaris]
          Length = 596

 Score = 54.3 bits (129), Expect = 2e-07
 Identities = 45/141 (31%), Positives = 72/141 (51%), Gaps = 6/141 (4%)
 Frame = +3

Query: 213 RVAVVTGGNKGIGLANVRDLCQQFSGDVMLTAR--DXXXXXXXXXXXXXEGLSPRFHQLD 386
           + AVVTG N GIG A  ++L ++    V+L  R  +             +G      Q+D
Sbjct: 316 KTAVVTGANSGIGKAVCQELARR-GARVILACRNWERGQKALAEIQVASKGTCLLLGQVD 374

Query: 387 IDDLRSIQALRDFLLKEYGGLNVLVNNAGIAF--KTVDPTPFHIQAEVTMKTNFLGTRNV 560
           +  + SI++   +LL+EY  +++LVNNA I+   KT+ P       ++T  TN++G   +
Sbjct: 375 LSSMASIRSFARWLLQEYPEIHLLVNNAAISGFPKTLTPEGL----DLTFATNYVGPFLL 430

Query: 561 CTELLPLIKPQG--RVVNVSS 617
              L   ++  G  RVVNVSS
Sbjct: 431 TNLLQGALQRAGSARVVNVSS 451


>ref|XP_854354.1| PREDICTED: similar to Retinol dehydrogenase 11 (Retinal reductase
           1) (RalR1) (Prostate short-chain dehydrogenase/reductase
           1) (Androgen-regulated short-chain
           dehydrogenase/reductase 1) (HCV core-binding protein
           HCBP12) [Canis familiaris]
          Length = 337

 Score = 52.4 bits (124), Expect = 8e-07
 Identities = 48/143 (33%), Positives = 65/143 (45%), Gaps = 8/143 (5%)
 Frame = +3

Query: 213 RVAVVTGGNKGIGLANVRDLCQQFSGDVMLTARDXXXXXXXXXXXXXEGLSPRF--HQLD 386
           +VAVVTG N GIG    ++L Q+    V L  RD                + +    +LD
Sbjct: 61  KVAVVTGANTGIGKETAKELAQR-GARVYLACRDVLKGELVAREIQTMTGNKQVLVRKLD 119

Query: 387 IDDLRSIQALRDFLLKEYGGLNVLVNNAGIAF----KTVDPTPFHIQAEVTMKTNFLGTR 554
           + D +SI+A     L E   L++L+NNAG+      KTVD    H      M  N LG  
Sbjct: 120 LADTKSIRAFAKGFLAEEKHLHILINNAGVMMCPYTKTVDGFEMH------MGVNHLGHF 173

Query: 555 NVCTELLPLIKPQ--GRVVNVSS 617
            +   LL  +K     R+VNVSS
Sbjct: 174 LLTHLLLEKLKESAPSRIVNVSS 196


>ref|XP_547866.2| PREDICTED: similar to retinol dehydrogenase 12 (all-trans and
           9-cis) [Canis familiaris]
          Length = 303

 Score = 50.4 bits (119), Expect = 3e-06
 Identities = 43/143 (30%), Positives = 65/143 (45%), Gaps = 8/143 (5%)
 Frame = +3

Query: 213 RVAVVTGGNKGIGLANVRDLCQQFSGDVMLTARDXXXXXXXXXXXXXEGLSPRF--HQLD 386
           +V V+TG N GIG    R+L ++    V +  RD             +  + +    +LD
Sbjct: 27  KVVVITGANTGIGKETARELARR-GARVYIACRDVLKGESAASEIRADTKNSQVLVRKLD 85

Query: 387 IDDLRSIQALRDFLLKEYGGLNVLVNNAGIAF----KTVDPTPFHIQAEVTMKTNFLGTR 554
           + D +SI+A  +  L E   L++L+NNAG+      KT D    H      +  N LG  
Sbjct: 86  LSDTKSIRAFAEGFLAEEKQLHILINNAGVMMCPYSKTADGFETH------LGVNHLGHF 139

Query: 555 NVCTELLPLIKPQ--GRVVNVSS 617
            +   LL  +K     RVVN+SS
Sbjct: 140 LLTHLLLERLKESTPARVVNLSS 162


  Database: RefSeqCP
    Posted date:  Aug 1, 2006  9:25 PM
  Number of letters in database: 19,266,565
  Number of sequences in database:  33,732
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 48,442,566
Number of Sequences: 33732
Number of extensions: 1315683
Number of successful extensions: 5395
Number of sequences better than 1.0e-05: 7
Number of HSP's better than  0.0 without gapping: 4594
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5366
length of database: 19,266,565
effective HSP length: 105
effective length of database: 15,724,705
effective search space used: 4324293875
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

Search to RefSeqHP

BLASTX 2.2.10 [Oct-19-2004]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TES01_0047_C11
         (1142 letters)

Database: RefSeqHP 
           39,411 sequences; 17,774,539 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_001748.1| carbonyl reductase 1 [Homo sapiens]                  469   e-132
Alignment   gi|NP_001227.1| carbonyl reductase 3 [Homo sapiens]                  371   e-103
Alignment   gi|NP_689656.1| retinol dehydrogenase 12 (all-trans and 9-cis) ...    51   2e-06
Alignment   gi|NP_057110.2| androgen-regulated short-chain dehydrogenase/re...    50   3e-06

>ref|NP_001748.1| carbonyl reductase 1 [Homo sapiens]
          Length = 277

 Score =  469 bits (1208), Expect = e-132
 Identities = 234/277 (84%), Positives = 248/277 (89%)
 Frame = +3

Query: 198  MSSNIRVAVVTGGNKGIGLANVRDLCQQFSGDVMLTARDXXXXXXXXXXXXXEGLSPRFH 377
            MSS I VA+VTGGNKGIGLA VRDLC+ FSGDV+LTARD             EGLSPRFH
Sbjct: 1    MSSGIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFH 60

Query: 378  QLDIDDLRSIQALRDFLLKEYGGLNVLVNNAGIAFKTVDPTPFHIQAEVTMKTNFLGTRN 557
            QLDIDDL+SI+ALRDFL KEYGGL+VLVNNAGIAFK  DPTPFHIQAEVTMKTNF GTR+
Sbjct: 61   QLDIDDLQSIRALRDFLRKEYGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRD 120

Query: 558  VCTELLPLIKPQGRVVNVSSTESVRALNNCSPELQQKFKSETITEEELVGLMNKFVEDTK 737
            VCTELLPLIKPQGRVVNVSS  SVRAL +CSPELQQKF+SETITEEELVGLMNKFVEDTK
Sbjct: 121  VCTELLPLIKPQGRVVNVSSIMSVRALKSCSPELQQKFRSETITEEELVGLMNKFVEDTK 180

Query: 738  NGVHKKEGWPSTAYGVTKIGVTVLSRIYARKLSEQRAGDKILLNACCPGWVRTDMAGPKA 917
             GVH+KEGWPS+AYGVTKIGVTVLSRI+ARKLSEQR GDKILLNACCPGWVRTDMAGPKA
Sbjct: 181  KGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAGPKA 240

Query: 918  PKSPEEGAETPVYLALLPSDAEGPHGQFVSEKKVVEW 1028
             KSPEEGAETPVYLALLP DAEGPHGQFVSEK+V +W
Sbjct: 241  TKSPEEGAETPVYLALLPPDAEGPHGQFVSEKRVEQW 277


>ref|NP_001227.1| carbonyl reductase 3 [Homo sapiens]
          Length = 277

 Score =  371 bits (952), Expect = e-103
 Identities = 182/277 (65%), Positives = 220/277 (79%)
 Frame = +3

Query: 198  MSSNIRVAVVTGGNKGIGLANVRDLCQQFSGDVMLTARDXXXXXXXXXXXXXEGLSPRFH 377
            MSS  RVA+VTG N+GIGLA  R+LC+QFSGDV+LTARD             EGLSPRFH
Sbjct: 1    MSSCSRVALVTGANRGIGLAIARELCRQFSGDVVLTARDVARGQAAVQQLQAEGLSPRFH 60

Query: 378  QLDIDDLRSIQALRDFLLKEYGGLNVLVNNAGIAFKTVDPTPFHIQAEVTMKTNFLGTRN 557
            QLDIDDL+SI+ALRDFL KEYGGLNVLVNNA +AFK+ DP PF I+AE+T+KTNF  TRN
Sbjct: 61   QLDIDDLQSIRALRDFLRKEYGGLNVLVNNAAVAFKSDDPMPFDIKAEMTLKTNFFATRN 120

Query: 558  VCTELLPLIKPQGRVVNVSSTESVRALNNCSPELQQKFKSETITEEELVGLMNKFVEDTK 737
            +C ELLP++KP GRVVN+SS + +RA  NCS +LQ++F SET+TE +LV LM KFVEDTK
Sbjct: 121  MCNELLPIMKPHGRVVNISSLQCLRAFENCSEDLQERFHSETLTEGDLVDLMKKFVEDTK 180

Query: 738  NGVHKKEGWPSTAYGVTKIGVTVLSRIYARKLSEQRAGDKILLNACCPGWVRTDMAGPKA 917
            N VH++EGWP++ YGV+K+GVTVLSRI AR+L E+R  D+IL+NACCPG V+TDM G  +
Sbjct: 181  NEVHEREGWPNSPYGVSKLGVTVLSRILARRLDEKRKADRILVNACCPGPVKTDMDGKDS 240

Query: 918  PKSPEEGAETPVYLALLPSDAEGPHGQFVSEKKVVEW 1028
             ++ EEGAETPVYLALLP DA  P GQ V +K V  W
Sbjct: 241  IRTVEEGAETPVYLALLPPDATEPQGQLVHDKVVQNW 277


>ref|NP_689656.1| retinol dehydrogenase 12 (all-trans and 9-cis) [Homo sapiens]
          Length = 316

 Score = 50.8 bits (120), Expect = 2e-06
 Identities = 43/141 (30%), Positives = 65/141 (46%), Gaps = 6/141 (4%)
 Frame = +3

Query: 213 RVAVVTGGNKGIGLANVRDLCQQFSGDVMLTARDXXXXXXXXXXXXXEGLSPRF--HQLD 386
           +V V+TG N GIG    R+L  +    V +  RD             +  + +    +LD
Sbjct: 40  KVVVITGANTGIGKETARELASR-GARVYIACRDVLKGESAASEIRVDTKNSQVLVRKLD 98

Query: 387 IDDLRSIQALRDFLLKEYGGLNVLVNNAGIAF----KTVDPTPFHIQAEVTMKTNFLGTR 554
           + D +SI+A  +  L E   L++L+NNAG+      KT D    H+   V    +FL T 
Sbjct: 99  LSDTKSIRAFAEGFLAEEKQLHILINNAGVMMCPYSKTADGFETHL--GVNHLGHFLLTY 156

Query: 555 NVCTELLPLIKPQGRVVNVSS 617
            +  +L   +    RVVNVSS
Sbjct: 157 LLLEQL--KVSAPARVVNVSS 175


>ref|NP_057110.2| androgen-regulated short-chain dehydrogenase/reductase 1 [Homo
           sapiens]
          Length = 318

 Score = 50.4 bits (119), Expect = 3e-06
 Identities = 47/143 (32%), Positives = 63/143 (44%), Gaps = 8/143 (5%)
 Frame = +3

Query: 213 RVAVVTGGNKGIGLANVRDLCQQFSGDVMLTARDXXXXXXXXXXXXXEGLSPRF--HQLD 386
           +V VVTG N GIG    ++L Q+    V L  RD                + +    +LD
Sbjct: 42  KVVVVTGANTGIGKETAKELAQR-GARVYLACRDVEKGELVAKEIQTTTGNQQVLVRKLD 100

Query: 387 IDDLRSIQALRDFLLKEYGGLNVLVNNAGIAF----KTVDPTPFHIQAEVTMKTNFLGTR 554
           + D +SI+A     L E   L+VL+NNAG+      KT D    HI        N LG  
Sbjct: 101 LSDTKSIRAFAKGFLAEEKHLHVLINNAGVMMCPYSKTADGFEMHI------GVNHLGHF 154

Query: 555 NVCTELLPLIKPQ--GRVVNVSS 617
            +   LL  +K     R+VNVSS
Sbjct: 155 LLTHLLLEKLKESAPSRIVNVSS 177


  Database: RefSeqHP
    Posted date:  Aug 2, 2006 12:57 AM
  Number of letters in database: 17,774,539
  Number of sequences in database:  39,411
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 46,982,242
Number of Sequences: 39411
Number of extensions: 1324736
Number of successful extensions: 5814
Number of sequences better than 1.0e-05: 4
Number of HSP's better than  0.0 without gapping: 4726
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5790
length of database: 17,774,539
effective HSP length: 104
effective length of database: 13,675,795
effective search space used: 3774519420
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

Search to RefSeqSP

BLASTX 2.2.10 [Oct-19-2004]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TES01_0047_C11
         (1142 letters)

Database: RefSeqSP 
           1040 sequences; 434,620 total letters

Searching...done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_999238.1| 20-beta-hydroxysteroid dehydrogenase [Sus scrofa]    488   e-139

>ref|NP_999238.1| 20-beta-hydroxysteroid dehydrogenase [Sus scrofa]
          Length = 289

 Score =  488 bits (1256), Expect = e-139
 Identities = 241/289 (83%), Positives = 257/289 (88%)
 Frame = +3

Query: 198  MSSNIRVAVVTGGNKGIGLANVRDLCQQFSGDVMLTARDXXXXXXXXXXXXXEGLSPRFH 377
            MSSN RVA+VTG NKGIG A VRDLC+QF+GDV+LTARD             EGLSPRFH
Sbjct: 1    MSSNTRVALVTGANKGIGFAIVRDLCRQFAGDVVLTARDVARGQAAVKQLQAEGLSPRFH 60

Query: 378  QLDIDDLRSIQALRDFLLKEYGGLNVLVNNAGIAFKTVDPTPFHIQAEVTMKTNFLGTRN 557
            QLDI DL+SI+AL DFL KEYGGL+VLVNNA IAF+  +PTPFHIQAE+TMKTNF+GTRN
Sbjct: 61   QLDIIDLQSIRALCDFLRKEYGGLDVLVNNAAIAFQLDNPTPFHIQAELTMKTNFMGTRN 120

Query: 558  VCTELLPLIKPQGRVVNVSSTESVRALNNCSPELQQKFKSETITEEELVGLMNKFVEDTK 737
            VCTELLPLIKPQGRVVNVSSTE VRALN CSPELQQKFKSETITEEELVGLMNKFVEDTK
Sbjct: 121  VCTELLPLIKPQGRVVNVSSTEGVRALNECSPELQQKFKSETITEEELVGLMNKFVEDTK 180

Query: 738  NGVHKKEGWPSTAYGVTKIGVTVLSRIYARKLSEQRAGDKILLNACCPGWVRTDMAGPKA 917
            NGVH+KEGW  + YGVTKIGV+VLSRIYARKL EQRAGDKILLNACCPGWVRTDM GPKA
Sbjct: 181  NGVHRKEGWSDSTYGVTKIGVSVLSRIYARKLREQRAGDKILLNACCPGWVRTDMGGPKA 240

Query: 918  PKSPEEGAETPVYLALLPSDAEGPHGQFVSEKKVVEWGVPP*SYPWVNA 1064
            PKSPE GAETPVYLALLPSDAEGPHGQFV++KKVVEWGVPP SYPWVNA
Sbjct: 241  PKSPEVGAETPVYLALLPSDAEGPHGQFVTDKKVVEWGVPPESYPWVNA 289


  Database: RefSeqSP
    Posted date:  Aug 1, 2006  7:14 PM
  Number of letters in database: 434,620
  Number of sequences in database:  1040
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,096,533
Number of Sequences: 1040
Number of extensions: 28557
Number of successful extensions: 119
Number of sequences better than 1.0e-05: 1
Number of HSP's better than  0.0 without gapping: 106
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 118
length of database: 434,620
effective HSP length: 78
effective length of database: 353,500
effective search space used: 106757000
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

Search to RefSeqMP

BLASTX 2.2.10 [Oct-19-2004]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TES01_0047_C11
         (1142 letters)

Database: RefSeqMP 
           45,328 sequences; 21,768,885 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_031646.1| carbonyl reductase 1 [Mus musculus]                  431   e-121
Alignment   gi|XP_487442.1| PREDICTED: similar to Carbonyl reductase [NADPH...   423   e-118
Alignment   gi|XP_989090.1| PREDICTED: similar to Carbonyl reductase [NADPH...   423   e-118
Alignment   gi|XP_359206.3| PREDICTED: similar to Carbonyl reductase [NADPH...   420   e-117
Alignment   gi|NP_766635.1| carbonyl reductase 3 [Mus musculus]                  385   e-107
Alignment   gi|NP_780581.1| retinol dehydrogenase 13 (all-trans and 9-cis) ...    62   1e-09
Alignment   gi|NP_084293.1| retinol dehydrogenase 12 [Mus musculus]               52   9e-07
Alignment   gi|NP_067532.2| short-chain dehydrogenase/reductase 1 [Mus musc...    52   1e-06

>ref|NP_031646.1| carbonyl reductase 1 [Mus musculus]
          Length = 277

 Score =  431 bits (1107), Expect = e-121
 Identities = 217/277 (78%), Positives = 235/277 (84%)
 Frame = +3

Query: 198  MSSNIRVAVVTGGNKGIGLANVRDLCQQFSGDVMLTARDXXXXXXXXXXXXXEGLSPRFH 377
            MSS+  VA+VTG NKGIG A  RDLC++FSGDV+L ARD             EGLSPRFH
Sbjct: 1    MSSSRPVALVTGANKGIGFAITRDLCRKFSGDVVLAARDEERGQTAVQKLQAEGLSPRFH 60

Query: 378  QLDIDDLRSIQALRDFLLKEYGGLNVLVNNAGIAFKTVDPTPFHIQAEVTMKTNFLGTRN 557
            QLDID+ +SI+ALRDFLLKEYGGL+VLVN AGIAFK  D TPFHIQAEVTM+TNF GTR+
Sbjct: 61   QLDIDNPQSIRALRDFLLKEYGGLDVLVNKAGIAFKVNDDTPFHIQAEVTMETNFFGTRD 120

Query: 558  VCTELLPLIKPQGRVVNVSSTESVRALNNCSPELQQKFKSETITEEELVGLMNKFVEDTK 737
            VC ELLPLIKPQGRVVNVSS  S+RAL NC  ELQQKF+SETITEEELVGLMNKFVEDTK
Sbjct: 121  VCKELLPLIKPQGRVVNVSSMVSLRALKNCRLELQQKFRSETITEEELVGLMNKFVEDTK 180

Query: 738  NGVHKKEGWPSTAYGVTKIGVTVLSRIYARKLSEQRAGDKILLNACCPGWVRTDMAGPKA 917
             GVH +EGWP++AYGVTKIGVTVLSRI ARKL+EQR  DKILLNACCPGWVRTDMAGPKA
Sbjct: 181  KGVHAEEGWPNSAYGVTKIGVTVLSRILARKLNEQRREDKILLNACCPGWVRTDMAGPKA 240

Query: 918  PKSPEEGAETPVYLALLPSDAEGPHGQFVSEKKVVEW 1028
             KSPEEGAETPVYLALLP DAEGPHGQFV +KKV  W
Sbjct: 241  TKSPEEGAETPVYLALLPPDAEGPHGQFVQDKKVEPW 277


>ref|XP_487442.1| PREDICTED: similar to Carbonyl reductase [NADPH] 1 (NADPH-dependent
            carbonyl reductase 1) [Mus musculus]
          Length = 277

 Score =  423 bits (1088), Expect = e-118
 Identities = 211/277 (76%), Positives = 232/277 (83%)
 Frame = +3

Query: 198  MSSNIRVAVVTGGNKGIGLANVRDLCQQFSGDVMLTARDXXXXXXXXXXXXXEGLSPRFH 377
            MS   RVA+VTGGNKGIG   +RDLCQ+FSGDV+LTARD             EGL+PRFH
Sbjct: 1    MSPCSRVALVTGGNKGIGFEIIRDLCQKFSGDVVLTARDEARGCAAVQKLQAEGLNPRFH 60

Query: 378  QLDIDDLRSIQALRDFLLKEYGGLNVLVNNAGIAFKTVDPTPFHIQAEVTMKTNFLGTRN 557
            QLDIDD +SI ALRDFLLKEY GL+VLVNNAGIAFK  DPTPFHI+ EVTMKTNF GTR+
Sbjct: 61   QLDIDDPQSIHALRDFLLKEYKGLDVLVNNAGIAFKVDDPTPFHIKGEVTMKTNFFGTRD 120

Query: 558  VCTELLPLIKPQGRVVNVSSTESVRALNNCSPELQQKFKSETITEEELVGLMNKFVEDTK 737
            VC E+LPLIKPQGRVVNVSS  S+ AL +CSPELQQKF+SETITEEELVGLMNK+VED K
Sbjct: 121  VCKEMLPLIKPQGRVVNVSSMVSLSALKDCSPELQQKFRSETITEEELVGLMNKYVEDAK 180

Query: 738  NGVHKKEGWPSTAYGVTKIGVTVLSRIYARKLSEQRAGDKILLNACCPGWVRTDMAGPKA 917
             GV+ KE WP++AY V+KIGVTVLSRI ARKL+EQR GDKILLNACCPGWVRTDM GP+A
Sbjct: 181  KGVYVKEDWPNSAYEVSKIGVTVLSRILARKLNEQRRGDKILLNACCPGWVRTDMTGPQA 240

Query: 918  PKSPEEGAETPVYLALLPSDAEGPHGQFVSEKKVVEW 1028
             KSPEEGAETPVYLALLP DAEGPHGQFV +K V  W
Sbjct: 241  TKSPEEGAETPVYLALLPPDAEGPHGQFVQDKTVEPW 277


>ref|XP_989090.1| PREDICTED: similar to Carbonyl reductase [NADPH] 1 (NADPH-dependent
            carbonyl reductase 1) [Mus musculus]
          Length = 277

 Score =  423 bits (1088), Expect = e-118
 Identities = 211/277 (76%), Positives = 232/277 (83%)
 Frame = +3

Query: 198  MSSNIRVAVVTGGNKGIGLANVRDLCQQFSGDVMLTARDXXXXXXXXXXXXXEGLSPRFH 377
            MS   RVA+VTGGNKGIG   +RDLCQ+FSGDV+LTARD             EGL+PRFH
Sbjct: 1    MSPCSRVALVTGGNKGIGFEIIRDLCQKFSGDVVLTARDEARGCAAVQKLQAEGLNPRFH 60

Query: 378  QLDIDDLRSIQALRDFLLKEYGGLNVLVNNAGIAFKTVDPTPFHIQAEVTMKTNFLGTRN 557
            QLDIDD +SI ALRDFLLKEY GL+VLVNNAGIAFK  DPTPFHI+ EVTMKTNF GTR+
Sbjct: 61   QLDIDDPQSIHALRDFLLKEYKGLDVLVNNAGIAFKVDDPTPFHIKGEVTMKTNFFGTRD 120

Query: 558  VCTELLPLIKPQGRVVNVSSTESVRALNNCSPELQQKFKSETITEEELVGLMNKFVEDTK 737
            VC E+LPLIKPQGRVVNVSS  S+ AL +CSPELQQKF+SETITEEELVGLMNK+VED K
Sbjct: 121  VCKEMLPLIKPQGRVVNVSSMVSLSALKDCSPELQQKFRSETITEEELVGLMNKYVEDAK 180

Query: 738  NGVHKKEGWPSTAYGVTKIGVTVLSRIYARKLSEQRAGDKILLNACCPGWVRTDMAGPKA 917
             GV+ KE WP++AY V+KIGVTVLSRI ARKL+EQR GDKILLNACCPGWVRTDM GP+A
Sbjct: 181  KGVYVKEDWPNSAYEVSKIGVTVLSRILARKLNEQRRGDKILLNACCPGWVRTDMTGPQA 240

Query: 918  PKSPEEGAETPVYLALLPSDAEGPHGQFVSEKKVVEW 1028
             KSPEEGAETPVYLALLP DAEGPHGQFV +K V  W
Sbjct: 241  TKSPEEGAETPVYLALLPPDAEGPHGQFVQDKTVEPW 277


>ref|XP_359206.3| PREDICTED: similar to Carbonyl reductase [NADPH] 1 (NADPH-dependent
            carbonyl reductase 1) [Mus musculus]
          Length = 277

 Score =  420 bits (1079), Expect = e-117
 Identities = 211/277 (76%), Positives = 230/277 (83%)
 Frame = +3

Query: 198  MSSNIRVAVVTGGNKGIGLANVRDLCQQFSGDVMLTARDXXXXXXXXXXXXXEGLSPRFH 377
            M S  R+A+VTG NKGIG A  RDLCQQFSGDV+LTARD             EGL PRFH
Sbjct: 1    MPSCSRIALVTGANKGIGFAITRDLCQQFSGDVVLTARDEARGLAAVQKLQAEGLIPRFH 60

Query: 378  QLDIDDLRSIQALRDFLLKEYGGLNVLVNNAGIAFKTVDPTPFHIQAEVTMKTNFLGTRN 557
            QLDI+D +SI ALR+FLLKEYGGL+VLVNNAGIA+K  D T FHI  E  MKTNF GT+ 
Sbjct: 61   QLDINDPQSIHALRNFLLKEYGGLDVLVNNAGIAYKGTDLTHFHILREAAMKTNFFGTQA 120

Query: 558  VCTELLPLIKPQGRVVNVSSTESVRALNNCSPELQQKFKSETITEEELVGLMNKFVEDTK 737
            VCTELLPLIK QGRVVN+SS  S+ AL NCS ELQQKF+SETITEEELVGLMNKFVEDTK
Sbjct: 121  VCTELLPLIKTQGRVVNISSLISLEALKNCSLELQQKFRSETITEEELVGLMNKFVEDTK 180

Query: 738  NGVHKKEGWPSTAYGVTKIGVTVLSRIYARKLSEQRAGDKILLNACCPGWVRTDMAGPKA 917
             GVH KEGWP++AYGV+KIGVTVLSRI ARKL+EQR GDKILLNACCPGWVRTDMAGP+A
Sbjct: 181  KGVHAKEGWPNSAYGVSKIGVTVLSRILARKLNEQRRGDKILLNACCPGWVRTDMAGPQA 240

Query: 918  PKSPEEGAETPVYLALLPSDAEGPHGQFVSEKKVVEW 1028
             KSPEEGAETPVYLALLP DAEGPHGQFV +KKV +W
Sbjct: 241  TKSPEEGAETPVYLALLPPDAEGPHGQFVQDKKVEQW 277


>ref|NP_766635.1| carbonyl reductase 3 [Mus musculus]
          Length = 277

 Score =  385 bits (988), Expect = e-107
 Identities = 188/277 (67%), Positives = 222/277 (80%)
 Frame = +3

Query: 198  MSSNIRVAVVTGGNKGIGLANVRDLCQQFSGDVMLTARDXXXXXXXXXXXXXEGLSPRFH 377
            MSS  RVA+VTG NKGIG A  RDLC++FSGDV+LTARD             EGLSPRFH
Sbjct: 1    MSSCSRVALVTGANKGIGFAITRDLCRKFSGDVVLTARDEARGRAAVQQLQAEGLSPRFH 60

Query: 378  QLDIDDLRSIQALRDFLLKEYGGLNVLVNNAGIAFKTVDPTPFHIQAEVTMKTNFLGTRN 557
            QLDIDD +SI+ALRDFL KEYGGLNVLVNNAGIAF+  DPTPF IQAEVT+KTNF  TRN
Sbjct: 61   QLDIDDPQSIRALRDFLRKEYGGLNVLVNNAGIAFRMDDPTPFDIQAEVTLKTNFFATRN 120

Query: 558  VCTELLPLIKPQGRVVNVSSTESVRALNNCSPELQQKFKSETITEEELVGLMNKFVEDTK 737
            VCTELLP++KP GRVVN+SS + ++AL NC  +LQ+KF+ +T+TE +LV LM KFVEDTK
Sbjct: 121  VCTELLPIMKPHGRVVNISSLQGLKALENCREDLQEKFRCDTLTEVDLVDLMKKFVEDTK 180

Query: 738  NGVHKKEGWPSTAYGVTKIGVTVLSRIYARKLSEQRAGDKILLNACCPGWVRTDMAGPKA 917
            N VH++EGWP +AYGV+K+GVTVL+RI AR+L E+R  D+ILLNACCPGWV+TDMA  + 
Sbjct: 181  NEVHEREGWPDSAYGVSKLGVTVLTRILARQLDEKRKADRILLNACCPGWVKTDMARDQG 240

Query: 918  PKSPEEGAETPVYLALLPSDAEGPHGQFVSEKKVVEW 1028
             ++ EEGAETPVYLALLP DA  PHGQ V +K V  W
Sbjct: 241  SRTVEEGAETPVYLALLPPDATEPHGQLVRDKVVQTW 277


>ref|NP_780581.1| retinol dehydrogenase 13 (all-trans and 9-cis) [Mus musculus]
          Length = 334

 Score = 61.6 bits (148), Expect = 1e-09
 Identities = 76/275 (27%), Positives = 118/275 (42%), Gaps = 24/275 (8%)
 Frame = +3

Query: 213 RVAVVTGGNKGIGLANVRDLCQQFSGDVMLTARDXXXXXXXXXXXXXEGLSPRFH--QLD 386
           +  +VTG N GIG     +L ++  G+V+L  RD             E L+PR    +LD
Sbjct: 39  KTVIVTGANTGIGKQTALELAKR-GGNVILACRDMEKCEVAAKDIRGETLNPRVRAERLD 97

Query: 387 IDDLRSIQALRDFLLKEYGGLNVLVNNAGIA----FKTVDPTPFHIQAEVTMKTNFLGTR 554
           +  L+SI+     ++KE   +++LVNNA +     + T D   F +Q  V    +FL T 
Sbjct: 98  LASLKSIREFARKVIKEEERVDILVNNAAVMRCPHWTTED--GFEMQFGVNYLGHFLLT- 154

Query: 555 NVCTELLPLIKPQGRVVNVSSTESVRALNNCSPELQQKFKSETITEEELVGLMNKFVEDT 734
           N+  + L    P  R++N+SS   V               +  I  E+L   M K+  DT
Sbjct: 155 NLLLDKLKASAP-SRIINLSSLAHV---------------AGHIDFEDLNWQMKKY--DT 196

Query: 735 KNGVHKKEGWPSTAYGVTKIGVTVLSRIYARKLSEQRAGDKILLNACCPGWVRTD----- 899
           K            AY  +K+ V     ++ ++LS +  G  + +NA  PG  RT+     
Sbjct: 197 K-----------AAYCQSKLAVV----LFTKELSHRLQGSGVTVNALHPGVARTELGRHT 241

Query: 900 ----------MAGP---KAPKSPEEGAETPVYLAL 965
                     M GP      KSP+  A+   YLA+
Sbjct: 242 GMHNSAFSGFMLGPFFWLLFKSPQLAAQPSTYLAV 276


>ref|NP_084293.1| retinol dehydrogenase 12 [Mus musculus]
          Length = 316

 Score = 52.4 bits (124), Expect = 9e-07
 Identities = 71/288 (24%), Positives = 117/288 (40%), Gaps = 20/288 (6%)
 Frame = +3

Query: 213  RVAVVTGGNKGIGLANVRDLCQQFSGDVMLTARDXXXXXXXXXXXXXEGLSPRF--HQLD 386
            +V V+TG N GIG    R+L ++    V +  RD             +  + +    +LD
Sbjct: 40   KVVVITGANTGIGKETARELARR-GARVYIACRDVLKGESAASEIRADTKNSQVLVRKLD 98

Query: 387  IDDLRSIQALRDFLLKEYGGLNVLVNNAGIAF----KTVDPTPFHIQAEVTMKTNFLGTR 554
            + D +SI+A  +  L E   L++L+NNAG+      KT D    H         N LG  
Sbjct: 99   LSDTKSIRAFAERFLAEEKKLHILINNAGVMMCPYSKTTDGFETH------FGVNHLGHF 152

Query: 555  NVCTELLPLIKPQ--GRVVNVSSTESVRALNNCSPELQQKFKSETITEEELVGLMNKFVE 728
             +   LL  +K     RVVN+SS                           +  L+ K   
Sbjct: 153  LLTYLLLERLKESAPARVVNLSS---------------------------IAHLIGKIRF 185

Query: 729  DTKNGVHKKEGWPSTAYGVTKIGVTVLSRIYARKLSEQRAGDKILLNACCPGWVRTDMAG 908
                G  +K    + AYG +K+     + ++ R+L+++  G  +   A  PG V +++  
Sbjct: 186  HDLQG--QKRYCSAFAYGHSKLA----NLLFTRELAKRLQGTGVTAYAVHPGVVLSEITR 239

Query: 909  PK----------AP--KSPEEGAETPVYLALLPSDAEGPHGQFVSEKK 1016
                        +P  KS  +GA+T ++ A L  D E   G++ S+ K
Sbjct: 240  NSYLLCLLWRLFSPFFKSTSQGAQTSLHCA-LAEDLEPLSGKYFSDCK 286


>ref|NP_067532.2| short-chain dehydrogenase/reductase 1 [Mus musculus]
          Length = 316

 Score = 52.0 bits (123), Expect = 1e-06
 Identities = 49/143 (34%), Positives = 65/143 (45%), Gaps = 8/143 (5%)
 Frame = +3

Query: 213 RVAVVTGGNKGIGLANVRDLCQQFSGDVMLTARDXXXXXXXXXXXXX-EGLSPRF-HQLD 386
           +VA+VTG N GIG    +DL Q+    V L  RD               G S  F  +LD
Sbjct: 39  KVAIVTGANTGIGKETAKDLAQR-GARVYLACRDVDKGELAAREIQAVTGNSQVFVRKLD 97

Query: 387 IDDLRSIQALRDFLLKEYGGLNVLVNNAGIAF----KTVDPTPFHIQAEVTMKTNFLGTR 554
           + D +SI+A     L E   L++L+NNAG+      KT D    HI        N LG  
Sbjct: 98  LADTKSIRAFAKDFLAEEKHLHLLINNAGVMMCPYSKTADGFEMHI------GVNHLGHF 151

Query: 555 NVCTELLPLIKPQ--GRVVNVSS 617
            +   LL  +K     R+VN+SS
Sbjct: 152 LLTHLLLEKLKESAPSRIVNLSS 174


  Database: RefSeqMP
    Posted date:  Aug 2, 2006 12:58 AM
  Number of letters in database: 21,768,885
  Number of sequences in database:  45,328
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 55,481,863
Number of Sequences: 45328
Number of extensions: 1502455
Number of successful extensions: 6363
Number of sequences better than 1.0e-05: 8
Number of HSP's better than  0.0 without gapping: 5318
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6331
length of database: 21,768,885
effective HSP length: 105
effective length of database: 17,009,445
effective search space used: 4677597375
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)