Animal-Genome cDNA ADR01_0072_B01

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ADR01_0072_B01
         (1410 letters)

Database: RefSeq49_SP.fasta 
           24,897 sequences; 11,343,932 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_999538.1| translationally-controlled tumor protein [Sus s...   350   1e-96
Alignment   gi|XP_001929313.2| PREDICTED: cytosolic purine 5'-nucleotidase ...   269   3e-72
Alignment   gi|XP_003361131.1| PREDICTED: hypothetical protein LOC100626972...   125   4e-29

>ref|NP_999538.1| translationally-controlled tumor protein [Sus scrofa].
          Length = 172

 Score =  350 bits (898), Expect = 1e-96
 Identities = 172/172 (100%), Positives = 172/172 (100%)
 Frame = +3

Query: 657  MIIYRDLISHDEMFSDIYKIREIADGLCLEVEGKMVSRTEGNIDDSLIGGNASAEGPEGE 836
            MIIYRDLISHDEMFSDIYKIREIADGLCLEVEGKMVSRTEGNIDDSLIGGNASAEGPEGE
Sbjct: 1    MIIYRDLISHDEMFSDIYKIREIADGLCLEVEGKMVSRTEGNIDDSLIGGNASAEGPEGE 60

Query: 837  GTESTVITGVDIVMNHHLQETSFTKEAYKKYIKDYMKSIKGKLEEQRPERVKPFMTGAAE 1016
            GTESTVITGVDIVMNHHLQETSFTKEAYKKYIKDYMKSIKGKLEEQRPERVKPFMTGAAE
Sbjct: 61   GTESTVITGVDIVMNHHLQETSFTKEAYKKYIKDYMKSIKGKLEEQRPERVKPFMTGAAE 120

Query: 1017 QIKHILANFKNYQFFIGENMNPDGMVALLDYREDGVTPYMIFFKDGLEMEKC 1172
            QIKHILANFKNYQFFIGENMNPDGMVALLDYREDGVTPYMIFFKDGLEMEKC
Sbjct: 121  QIKHILANFKNYQFFIGENMNPDGMVALLDYREDGVTPYMIFFKDGLEMEKC 172


>ref|XP_001929313.2| PREDICTED: cytosolic purine 5'-nucleotidase [Sus scrofa].
          Length = 401

 Score =  269 bits (687), Expect = 3e-72
 Identities = 139/155 (89%), Positives = 141/155 (90%)
 Frame = +3

Query: 654  IMIIYRDLISHDEMFSDIYKIREIADGLCLEVEGKMVSRTEGNIDDSLIGGNASAEGPEG 833
            IMII RDLISH EMFSDI K REI DGLCLEVEGKMVSRTE +IDDS IGGNASAEGPEG
Sbjct: 109  IMIISRDLISH-EMFSDICKTREIVDGLCLEVEGKMVSRTEDDIDDSPIGGNASAEGPEG 167

Query: 834  EGTESTVITGVDIVMNHHLQETSFTKEAYKKYIKDYMKSIKGKLEEQRPERVKPFMTGAA 1013
            EGTEST ITGVDIVM+HHLQETSF KEAYKKY KDYMKSIKGKLEEQR ERVKPFMTGAA
Sbjct: 168  EGTESTAITGVDIVMDHHLQETSFMKEAYKKYTKDYMKSIKGKLEEQRAERVKPFMTGAA 227

Query: 1014 EQIKHILANFKNYQFFIGENMNPDGMVALLDYRED 1118
            EQIKHILANFKN QFFIGENMNPDGMVALLD  ED
Sbjct: 228  EQIKHILANFKNCQFFIGENMNPDGMVALLDCHED 262


>ref|XP_003361131.1| PREDICTED: hypothetical protein LOC100626972 [Sus scrofa].
          Length = 237

 Score =  125 bits (315), Expect = 4e-29
 Identities = 69/99 (69%), Positives = 69/99 (69%)
 Frame = +3

Query: 759  MVSRTEGNIDDSLIGGNASAEGPEGEGTESTVITGVDIVMNHHLQETSFTKEAYKKYIKD 938
            MVSRTEGNIDDSLIGGNASAEGPEG                              KYIKD
Sbjct: 142  MVSRTEGNIDDSLIGGNASAEGPEGXXXXXXXX----------------------KYIKD 179

Query: 939  YMKSIKGKLEEQRPERVKPFMTGAAEQIKHILANFKNYQ 1055
            YMKSIKGKLEEQRPERVKPFMTGAAEQIKHILANFKNYQ
Sbjct: 180  YMKSIKGKLEEQRPERVKPFMTGAAEQIKHILANFKNYQ 218


  Database: RefSeq49_SP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 11,343,932
  Number of sequ


Search to RefSeqMP_Rel49
BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ADR01_0072_B01
         (1410 letters)

Database: RefSeq49_MP.fasta 
           30,036 sequences; 15,617,559 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_033455.1| translationally-controlled tumor protein [Mus m...   340   2e-93

>ref|NP_033455.1| translationally-controlled tumor protein [Mus musculus].
          Length = 172

 Score =  340 bits (872), Expect = 2e-93
 Identities = 165/172 (95%), Positives = 170/172 (98%)
 Frame = +3

Query: 657  MIIYRDLISHDEMFSDIYKIREIADGLCLEVEGKMVSRTEGNIDDSLIGGNASAEGPEGE 836
            MIIYRDLISHDE+FSDIYKIREIADGLCLEVEGKMVSRTEG IDDSLIGGNASAEGPEGE
Sbjct: 1    MIIYRDLISHDELFSDIYKIREIADGLCLEVEGKMVSRTEGAIDDSLIGGNASAEGPEGE 60

Query: 837  GTESTVITGVDIVMNHHLQETSFTKEAYKKYIKDYMKSIKGKLEEQRPERVKPFMTGAAE 1016
            GTESTV+TGVDIVMNHHLQETSFTKEAYKKYIKDYMKS+KGKLEEQ+PERVKPFMTGAAE
Sbjct: 61   GTESTVVTGVDIVMNHHLQETSFTKEAYKKYIKDYMKSLKGKLEEQKPERVKPFMTGAAE 120

Query: 1017 QIKHILANFKNYQFFIGENMNPDGMVALLDYREDGVTPYMIFFKDGLEMEKC 1172
            QIKHILANF NYQFFIGENMNPDGMVALLDYREDGVTP+MIFFKDGLEMEKC
Sbjct: 121  QIKHILANFNNYQFFIGENMNPDGMVALLDYREDGVTPFMIFFKDGLEMEKC 172


  Database: RefSeq49_MP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 15,617,559
  Number of sequences in database:  30,036
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 30036
Number of Hits to DB: 31,458,227
Number of extensions: 712500
Number of successful extensions: 2320
Number of sequences better than 1.0e-05: 1
Number of HSP's gapped: 2318
Number of HSP's successfully gapped: 1
Length of query: 470
Length of database: 15,617,559
Length adjustment: 105
Effective length of query: 365
Effective length of database: 12,463,779
Effective search space: 4549279335
Effective search space used: 4549279335
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)

ences in database:  24,897
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 24897
Number of Hits to DB: 26,173,318
Number of extensions: 1085667
Number of successful extensions: 1725
Number of sequences better than 1.0e-05: 3
Number of HSP's gapped: 1723
Number of HSP's successfully gapped: 3
Length of query: 470
Length of database: 11,343,932
Length adjustment: 103
Effective length of query: 367
Effective length of database: 8,779,541
Effective search space: 3222091547
Effective search space used: 3222091547
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ADR01_0072_B01
         (1410 letters)

Database: RefSeq49_HP.fasta 
           32,964 sequences; 18,297,164 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_003286.1| translationally-controlled tumor protein [Homo ...   350   2e-96
Alignment   gi|NP_997305.2| TPT1-like protein [Homo sapiens].                    235   7e-62

>ref|NP_003286.1| translationally-controlled tumor protein [Homo sapiens].
          Length = 172

 Score =  350 bits (898), Expect = 2e-96
 Identities = 172/172 (100%), Positives = 172/172 (100%)
 Frame = +3

Query: 657  MIIYRDLISHDEMFSDIYKIREIADGLCLEVEGKMVSRTEGNIDDSLIGGNASAEGPEGE 836
            MIIYRDLISHDEMFSDIYKIREIADGLCLEVEGKMVSRTEGNIDDSLIGGNASAEGPEGE
Sbjct: 1    MIIYRDLISHDEMFSDIYKIREIADGLCLEVEGKMVSRTEGNIDDSLIGGNASAEGPEGE 60

Query: 837  GTESTVITGVDIVMNHHLQETSFTKEAYKKYIKDYMKSIKGKLEEQRPERVKPFMTGAAE 1016
            GTESTVITGVDIVMNHHLQETSFTKEAYKKYIKDYMKSIKGKLEEQRPERVKPFMTGAAE
Sbjct: 61   GTESTVITGVDIVMNHHLQETSFTKEAYKKYIKDYMKSIKGKLEEQRPERVKPFMTGAAE 120

Query: 1017 QIKHILANFKNYQFFIGENMNPDGMVALLDYREDGVTPYMIFFKDGLEMEKC 1172
            QIKHILANFKNYQFFIGENMNPDGMVALLDYREDGVTPYMIFFKDGLEMEKC
Sbjct: 121  QIKHILANFKNYQFFIGENMNPDGMVALLDYREDGVTPYMIFFKDGLEMEKC 172


>ref|NP_997305.2| TPT1-like protein [Homo sapiens].
          Length = 140

 Score =  235 bits (600), Expect = 7e-62
 Identities = 120/134 (89%), Positives = 124/134 (92%)
 Frame = +3

Query: 654  IMIIYRDLISHDEMFSDIYKIREIADGLCLEVEGKMVSRTEGNIDDSLIGGNASAEGPEG 833
            IMIIY DLISH EMFSD Y  +EIADGL LEVEGK+VSRTEGNI DSLIGGNASAEGPEG
Sbjct: 5    IMIIYWDLISHSEMFSDSYMSQEIADGLRLEVEGKIVSRTEGNIFDSLIGGNASAEGPEG 64

Query: 834  EGTESTVITGVDIVMNHHLQETSFTKEAYKKYIKDYMKSIKGKLEEQRPERVKPFMTGAA 1013
            +GTESTVITGVD VMNHHLQETSFTKEAY K IKDYMKSIKGKLEEQRP+RVKPFMTGAA
Sbjct: 65   KGTESTVITGVDSVMNHHLQETSFTKEAYNKCIKDYMKSIKGKLEEQRPKRVKPFMTGAA 124

Query: 1014 EQIKHILANFKNYQ 1055
            EQIKHILANFKNYQ
Sbjct: 125  EQIKHILANFKNYQ 138


  Database: RefSeq49_HP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 18,297,164
  Number of sequences in database:  32,964
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 32964
Number of Hits to DB: 36,662,429
Number of extensions: 817910
Number of successful extensions: 2766
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 2759
Number of HSP's successfully gapped: 2
Length of query: 470
Length of database: 18,297,164
Length adjustment: 106
Effective length of query: 364
Effective length of database: 14,802,980
Effective search space: 5388284720
Effective search space used: 5388284720
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ADR01_0072_B01
         (1410 letters)

Database: RefSeq49_BP.fasta 
           33,088 sequences; 17,681,374 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_001014410.1| translationally-controlled tumor protein [Bo...   350   2e-96
Alignment   gi|XP_002697965.1| PREDICTED: tumor protein, translationally-co...   350   2e-96
Alignment   gi|XP_002694752.1| PREDICTED: tumor protein, translationally-co...   342   6e-94
Alignment   gi|XP_001254327.1| PREDICTED: tumor protein, translationally-co...   342   6e-94
Alignment   gi|XP_002690958.1| PREDICTED: tumor protein, translationally-co...   222   5e-58
Alignment   gi|XP_002700688.1| PREDICTED: tumor protein, translationally-co...   222   5e-58

>ref|NP_001014410.1| translationally-controlled tumor protein [Bos taurus].
          Length = 172

 Score =  350 bits (897), Expect = 2e-96
 Identities = 171/172 (99%), Positives = 172/172 (100%)
 Frame = +3

Query: 657  MIIYRDLISHDEMFSDIYKIREIADGLCLEVEGKMVSRTEGNIDDSLIGGNASAEGPEGE 836
            MIIYRDLISHDEMFSDIYKIRE+ADGLCLEVEGKMVSRTEGNIDDSLIGGNASAEGPEGE
Sbjct: 1    MIIYRDLISHDEMFSDIYKIREVADGLCLEVEGKMVSRTEGNIDDSLIGGNASAEGPEGE 60

Query: 837  GTESTVITGVDIVMNHHLQETSFTKEAYKKYIKDYMKSIKGKLEEQRPERVKPFMTGAAE 1016
            GTESTVITGVDIVMNHHLQETSFTKEAYKKYIKDYMKSIKGKLEEQRPERVKPFMTGAAE
Sbjct: 61   GTESTVITGVDIVMNHHLQETSFTKEAYKKYIKDYMKSIKGKLEEQRPERVKPFMTGAAE 120

Query: 1017 QIKHILANFKNYQFFIGENMNPDGMVALLDYREDGVTPYMIFFKDGLEMEKC 1172
            QIKHILANFKNYQFFIGENMNPDGMVALLDYREDGVTPYMIFFKDGLEMEKC
Sbjct: 121  QIKHILANFKNYQFFIGENMNPDGMVALLDYREDGVTPYMIFFKDGLEMEKC 172


>ref|XP_002697965.1| PREDICTED: tumor protein, translationally-controlled 1-like [Bos
            taurus].
          Length = 172

 Score =  350 bits (897), Expect = 2e-96
 Identities = 171/172 (99%), Positives = 172/172 (100%)
 Frame = +3

Query: 657  MIIYRDLISHDEMFSDIYKIREIADGLCLEVEGKMVSRTEGNIDDSLIGGNASAEGPEGE 836
            MIIYRDLISHDEMFSDIYKIRE+ADGLCLEVEGKMVSRTEGNIDDSLIGGNASAEGPEGE
Sbjct: 1    MIIYRDLISHDEMFSDIYKIREVADGLCLEVEGKMVSRTEGNIDDSLIGGNASAEGPEGE 60

Query: 837  GTESTVITGVDIVMNHHLQETSFTKEAYKKYIKDYMKSIKGKLEEQRPERVKPFMTGAAE 1016
            GTESTVITGVDIVMNHHLQETSFTKEAYKKYIKDYMKSIKGKLEEQRPERVKPFMTGAAE
Sbjct: 61   GTESTVITGVDIVMNHHLQETSFTKEAYKKYIKDYMKSIKGKLEEQRPERVKPFMTGAAE 120

Query: 1017 QIKHILANFKNYQFFIGENMNPDGMVALLDYREDGVTPYMIFFKDGLEMEKC 1172
            QIKHILANFKNYQFFIGENMNPDGMVALLDYREDGVTPYMIFFKDGLEMEKC
Sbjct: 121  QIKHILANFKNYQFFIGENMNPDGMVALLDYREDGVTPYMIFFKDGLEMEKC 172


>ref|XP_002694752.1| PREDICTED: tumor protein, translationally-controlled 1-like [Bos
            taurus].
          Length = 172

 Score =  342 bits (876), Expect = 6e-94
 Identities = 167/172 (97%), Positives = 170/172 (98%)
 Frame = +3

Query: 657  MIIYRDLISHDEMFSDIYKIREIADGLCLEVEGKMVSRTEGNIDDSLIGGNASAEGPEGE 836
            MIIYRDLISHD+MFSDIYKIRE+ADGLCLEVEGKMVSRTEGNIDDSLIGGNASAEGP+GE
Sbjct: 1    MIIYRDLISHDKMFSDIYKIREVADGLCLEVEGKMVSRTEGNIDDSLIGGNASAEGPDGE 60

Query: 837  GTESTVITGVDIVMNHHLQETSFTKEAYKKYIKDYMKSIKGKLEEQRPERVKPFMTGAAE 1016
            GTESTVITGVDIVMNH LQETSFTKEAYKKYIKDYMKSIKGKLEEQRPERVKPFMTGAAE
Sbjct: 61   GTESTVITGVDIVMNHRLQETSFTKEAYKKYIKDYMKSIKGKLEEQRPERVKPFMTGAAE 120

Query: 1017 QIKHILANFKNYQFFIGENMNPDGMVALLDYREDGVTPYMIFFKDGLEMEKC 1172
            QIKHILANFKNYQFFIGENMNPDGMVALLDYREDGVTPYMIFFKDGLEME C
Sbjct: 121  QIKHILANFKNYQFFIGENMNPDGMVALLDYREDGVTPYMIFFKDGLEMETC 172


>ref|XP_001254327.1| PREDICTED: tumor protein, translationally-controlled 1 [Bos taurus].
          Length = 172

 Score =  342 bits (876), Expect = 6e-94
 Identities = 167/172 (97%), Positives = 170/172 (98%)
 Frame = +3

Query: 657  MIIYRDLISHDEMFSDIYKIREIADGLCLEVEGKMVSRTEGNIDDSLIGGNASAEGPEGE 836
            MIIYRDLISHD+MFSDIYKIRE+ADGLCLEVEGKMVSRTEGNIDDSLIGGNASAEGP+GE
Sbjct: 1    MIIYRDLISHDKMFSDIYKIREVADGLCLEVEGKMVSRTEGNIDDSLIGGNASAEGPDGE 60

Query: 837  GTESTVITGVDIVMNHHLQETSFTKEAYKKYIKDYMKSIKGKLEEQRPERVKPFMTGAAE 1016
            GTESTVITGVDIVMNH LQETSFTKEAYKKYIKDYMKSIKGKLEEQRPERVKPFMTGAAE
Sbjct: 61   GTESTVITGVDIVMNHRLQETSFTKEAYKKYIKDYMKSIKGKLEEQRPERVKPFMTGAAE 120

Query: 1017 QIKHILANFKNYQFFIGENMNPDGMVALLDYREDGVTPYMIFFKDGLEMEKC 1172
            QIKHILANFKNYQFFIGENMNPDGMVALLDYREDGVTPYMIFFKDGLEME C
Sbjct: 121  QIKHILANFKNYQFFIGENMNPDGMVALLDYREDGVTPYMIFFKDGLEMETC 172


>ref|XP_002690958.1| PREDICTED: tumor protein, translationally-controlled 1-like [Bos
            taurus].
          Length = 126

 Score =  222 bits (566), Expect = 5e-58
 Identities = 107/107 (100%), Positives = 107/107 (100%)
 Frame = +3

Query: 852  VITGVDIVMNHHLQETSFTKEAYKKYIKDYMKSIKGKLEEQRPERVKPFMTGAAEQIKHI 1031
            VITGVDIVMNHHLQETSFTKEAYKKYIKDYMKSIKGKLEEQRPERVKPFMTGAAEQIKHI
Sbjct: 20   VITGVDIVMNHHLQETSFTKEAYKKYIKDYMKSIKGKLEEQRPERVKPFMTGAAEQIKHI 79

Query: 1032 LANFKNYQFFIGENMNPDGMVALLDYREDGVTPYMIFFKDGLEMEKC 1172
            LANFKNYQFFIGENMNPDGMVALLDYREDGVTPYMIFFKDGLEMEKC
Sbjct: 80   LANFKNYQFFIGENMNPDGMVALLDYREDGVTPYMIFFKDGLEMEKC 126


>ref|XP_002700688.1| PREDICTED: tumor protein, translationally-controlled 1-like [Bos
            taurus].
          Length = 126

 Score =  222 bits (566), Expect = 5e-58
 Identities = 107/107 (100%), Positives = 107/107 (100%)
 Frame = +3

Query: 852  VITGVDIVMNHHLQETSFTKEAYKKYIKDYMKSIKGKLEEQRPERVKPFMTGAAEQIKHI 1031
            VITGVDIVMNHHLQETSFTKEAYKKYIKDYMKSIKGKLEEQRPERVKPFMTGAAEQIKHI
Sbjct: 20   VITGVDIVMNHHLQETSFTKEAYKKYIKDYMKSIKGKLEEQRPERVKPFMTGAAEQIKHI 79

Query: 1032 LANFKNYQFFIGENMNPDGMVALLDYREDGVTPYMIFFKDGLEMEKC 1172
            LANFKNYQFFIGENMNPDGMVALLDYREDGVTPYMIFFKDGLEMEKC
Sbjct: 80   LANFKNYQFFIGENMNPDGMVALLDYREDGVTPYMIFFKDGLEMEKC 126


  Database: RefSeq49_BP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 17,681,374
  Number of sequences in database:  33,088
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33088
Number of Hits to DB: 37,084,271
Number of extensions: 1070934
Number of successful extensions: 2668
Number of sequences better than 1.0e-05: 6
Number of HSP's gapped: 2665
Number of HSP's successfully gapped: 6
Length of query: 470
Length of database: 17,681,374
Length adjustment: 106
Effective length of query: 364
Effective length of database: 14,174,046
Effective search space: 5159352744
Effective search space used: 5159352744
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ADR01_0072_B01
         (1410 letters)

Database: RefSeq49_CP.fasta 
           33,336 sequences; 18,874,504 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|XP_856566.1| PREDICTED: similar to Translationally controlle...   350   2e-96
Alignment   gi|XP_856519.1| PREDICTED: similar to Translationally controlle...   350   2e-96
Alignment   gi|XP_856437.1| PREDICTED: similar to Translationally controlle...   350   2e-96
Alignment   gi|XP_534126.1| PREDICTED: similar to Translationally controlle...   350   2e-96
Alignment   gi|XP_856352.1| PREDICTED: similar to Translationally controlle...   298   8e-81
Alignment   gi|XP_856480.1| PREDICTED: similar to Translationally controlle...   283   4e-76
Alignment   gi|XP_856393.1| PREDICTED: similar to Translationally controlle...   268   9e-72
Alignment   gi|XP_854430.1| PREDICTED: similar to Neuromedin-B receptor (NM...    61   3e-09

>ref|XP_856566.1| PREDICTED: similar to Translationally controlled tumor protein (TCTP)
            (p23) (Histamine-releasing factor) (HRF) isoform 7 [Canis
            familiaris].
          Length = 172

 Score =  350 bits (898), Expect = 2e-96
 Identities = 172/172 (100%), Positives = 172/172 (100%)
 Frame = +3

Query: 657  MIIYRDLISHDEMFSDIYKIREIADGLCLEVEGKMVSRTEGNIDDSLIGGNASAEGPEGE 836
            MIIYRDLISHDEMFSDIYKIREIADGLCLEVEGKMVSRTEGNIDDSLIGGNASAEGPEGE
Sbjct: 1    MIIYRDLISHDEMFSDIYKIREIADGLCLEVEGKMVSRTEGNIDDSLIGGNASAEGPEGE 60

Query: 837  GTESTVITGVDIVMNHHLQETSFTKEAYKKYIKDYMKSIKGKLEEQRPERVKPFMTGAAE 1016
            GTESTVITGVDIVMNHHLQETSFTKEAYKKYIKDYMKSIKGKLEEQRPERVKPFMTGAAE
Sbjct: 61   GTESTVITGVDIVMNHHLQETSFTKEAYKKYIKDYMKSIKGKLEEQRPERVKPFMTGAAE 120

Query: 1017 QIKHILANFKNYQFFIGENMNPDGMVALLDYREDGVTPYMIFFKDGLEMEKC 1172
            QIKHILANFKNYQFFIGENMNPDGMVALLDYREDGVTPYMIFFKDGLEMEKC
Sbjct: 121  QIKHILANFKNYQFFIGENMNPDGMVALLDYREDGVTPYMIFFKDGLEMEKC 172


>ref|XP_856519.1| PREDICTED: similar to Translationally controlled tumor protein (TCTP)
            (p23) (Histamine-releasing factor) (HRF) isoform 6 [Canis
            familiaris].
          Length = 172

 Score =  350 bits (898), Expect = 2e-96
 Identities = 172/172 (100%), Positives = 172/172 (100%)
 Frame = +3

Query: 657  MIIYRDLISHDEMFSDIYKIREIADGLCLEVEGKMVSRTEGNIDDSLIGGNASAEGPEGE 836
            MIIYRDLISHDEMFSDIYKIREIADGLCLEVEGKMVSRTEGNIDDSLIGGNASAEGPEGE
Sbjct: 1    MIIYRDLISHDEMFSDIYKIREIADGLCLEVEGKMVSRTEGNIDDSLIGGNASAEGPEGE 60

Query: 837  GTESTVITGVDIVMNHHLQETSFTKEAYKKYIKDYMKSIKGKLEEQRPERVKPFMTGAAE 1016
            GTESTVITGVDIVMNHHLQETSFTKEAYKKYIKDYMKSIKGKLEEQRPERVKPFMTGAAE
Sbjct: 61   GTESTVITGVDIVMNHHLQETSFTKEAYKKYIKDYMKSIKGKLEEQRPERVKPFMTGAAE 120

Query: 1017 QIKHILANFKNYQFFIGENMNPDGMVALLDYREDGVTPYMIFFKDGLEMEKC 1172
            QIKHILANFKNYQFFIGENMNPDGMVALLDYREDGVTPYMIFFKDGLEMEKC
Sbjct: 121  QIKHILANFKNYQFFIGENMNPDGMVALLDYREDGVTPYMIFFKDGLEMEKC 172


>ref|XP_856437.1| PREDICTED: similar to Translationally controlled tumor protein (TCTP)
            (p23) (Histamine-releasing factor) (HRF) isoform 4 [Canis
            familiaris].
          Length = 172

 Score =  350 bits (898), Expect = 2e-96
 Identities = 172/172 (100%), Positives = 172/172 (100%)
 Frame = +3

Query: 657  MIIYRDLISHDEMFSDIYKIREIADGLCLEVEGKMVSRTEGNIDDSLIGGNASAEGPEGE 836
            MIIYRDLISHDEMFSDIYKIREIADGLCLEVEGKMVSRTEGNIDDSLIGGNASAEGPEGE
Sbjct: 1    MIIYRDLISHDEMFSDIYKIREIADGLCLEVEGKMVSRTEGNIDDSLIGGNASAEGPEGE 60

Query: 837  GTESTVITGVDIVMNHHLQETSFTKEAYKKYIKDYMKSIKGKLEEQRPERVKPFMTGAAE 1016
            GTESTVITGVDIVMNHHLQETSFTKEAYKKYIKDYMKSIKGKLEEQRPERVKPFMTGAAE
Sbjct: 61   GTESTVITGVDIVMNHHLQETSFTKEAYKKYIKDYMKSIKGKLEEQRPERVKPFMTGAAE 120

Query: 1017 QIKHILANFKNYQFFIGENMNPDGMVALLDYREDGVTPYMIFFKDGLEMEKC 1172
            QIKHILANFKNYQFFIGENMNPDGMVALLDYREDGVTPYMIFFKDGLEMEKC
Sbjct: 121  QIKHILANFKNYQFFIGENMNPDGMVALLDYREDGVTPYMIFFKDGLEMEKC 172


>ref|XP_534126.1| PREDICTED: similar to Translationally controlled tumor protein (TCTP)
            (p23) (Histamine-releasing factor) (HRF) isoform 1 [Canis
            familiaris].
          Length = 172

 Score =  350 bits (898), Expect = 2e-96
 Identities = 172/172 (100%), Positives = 172/172 (100%)
 Frame = +3

Query: 657  MIIYRDLISHDEMFSDIYKIREIADGLCLEVEGKMVSRTEGNIDDSLIGGNASAEGPEGE 836
            MIIYRDLISHDEMFSDIYKIREIADGLCLEVEGKMVSRTEGNIDDSLIGGNASAEGPEGE
Sbjct: 1    MIIYRDLISHDEMFSDIYKIREIADGLCLEVEGKMVSRTEGNIDDSLIGGNASAEGPEGE 60

Query: 837  GTESTVITGVDIVMNHHLQETSFTKEAYKKYIKDYMKSIKGKLEEQRPERVKPFMTGAAE 1016
            GTESTVITGVDIVMNHHLQETSFTKEAYKKYIKDYMKSIKGKLEEQRPERVKPFMTGAAE
Sbjct: 61   GTESTVITGVDIVMNHHLQETSFTKEAYKKYIKDYMKSIKGKLEEQRPERVKPFMTGAAE 120

Query: 1017 QIKHILANFKNYQFFIGENMNPDGMVALLDYREDGVTPYMIFFKDGLEMEKC 1172
            QIKHILANFKNYQFFIGENMNPDGMVALLDYREDGVTPYMIFFKDGLEMEKC
Sbjct: 121  QIKHILANFKNYQFFIGENMNPDGMVALLDYREDGVTPYMIFFKDGLEMEKC 172


>ref|XP_856352.1| PREDICTED: similar to Translationally controlled tumor protein (TCTP)
            (p23) (Histamine-releasing factor) (HRF) isoform 2 [Canis
            familiaris].
          Length = 152

 Score =  298 bits (763), Expect = 8e-81
 Identities = 152/172 (88%), Positives = 152/172 (88%)
 Frame = +3

Query: 657  MIIYRDLISHDEMFSDIYKIREIADGLCLEVEGKMVSRTEGNIDDSLIGGNASAEGPEGE 836
            MIIYRDLISHDEMFSDIYKIREIADGLCLEVEGKMVSRTEGNIDDSLIGGNASAEGPEGE
Sbjct: 1    MIIYRDLISHDEMFSDIYKIREIADGLCLEVEGKMVSRTEGNIDDSLIGGNASAEGPEGE 60

Query: 837  GTESTVITGVDIVMNHHLQETSFTKEAYKKYIKDYMKSIKGKLEEQRPERVKPFMTGAAE 1016
            GTESTVITGVDIVMNHHLQETSFTKEAYKK                    VKPFMTGAAE
Sbjct: 61   GTESTVITGVDIVMNHHLQETSFTKEAYKK--------------------VKPFMTGAAE 100

Query: 1017 QIKHILANFKNYQFFIGENMNPDGMVALLDYREDGVTPYMIFFKDGLEMEKC 1172
            QIKHILANFKNYQFFIGENMNPDGMVALLDYREDGVTPYMIFFKDGLEMEKC
Sbjct: 101  QIKHILANFKNYQFFIGENMNPDGMVALLDYREDGVTPYMIFFKDGLEMEKC 152


>ref|XP_856480.1| PREDICTED: similar to Translationally controlled tumor protein (TCTP)
            (p23) (Histamine-releasing factor) (HRF) isoform 5 [Canis
            familiaris].
          Length = 138

 Score =  283 bits (723), Expect = 4e-76
 Identities = 138/138 (100%), Positives = 138/138 (100%)
 Frame = +3

Query: 759  MVSRTEGNIDDSLIGGNASAEGPEGEGTESTVITGVDIVMNHHLQETSFTKEAYKKYIKD 938
            MVSRTEGNIDDSLIGGNASAEGPEGEGTESTVITGVDIVMNHHLQETSFTKEAYKKYIKD
Sbjct: 1    MVSRTEGNIDDSLIGGNASAEGPEGEGTESTVITGVDIVMNHHLQETSFTKEAYKKYIKD 60

Query: 939  YMKSIKGKLEEQRPERVKPFMTGAAEQIKHILANFKNYQFFIGENMNPDGMVALLDYRED 1118
            YMKSIKGKLEEQRPERVKPFMTGAAEQIKHILANFKNYQFFIGENMNPDGMVALLDYRED
Sbjct: 61   YMKSIKGKLEEQRPERVKPFMTGAAEQIKHILANFKNYQFFIGENMNPDGMVALLDYRED 120

Query: 1119 GVTPYMIFFKDGLEMEKC 1172
            GVTPYMIFFKDGLEMEKC
Sbjct: 121  GVTPYMIFFKDGLEMEKC 138


>ref|XP_856393.1| PREDICTED: similar to Translationally controlled tumor protein (TCTP)
            (p23) (Histamine-releasing factor) (HRF) isoform 3 [Canis
            familiaris].
          Length = 133

 Score =  268 bits (685), Expect = 9e-72
 Identities = 133/133 (100%), Positives = 133/133 (100%)
 Frame = +3

Query: 657  MIIYRDLISHDEMFSDIYKIREIADGLCLEVEGKMVSRTEGNIDDSLIGGNASAEGPEGE 836
            MIIYRDLISHDEMFSDIYKIREIADGLCLEVEGKMVSRTEGNIDDSLIGGNASAEGPEGE
Sbjct: 1    MIIYRDLISHDEMFSDIYKIREIADGLCLEVEGKMVSRTEGNIDDSLIGGNASAEGPEGE 60

Query: 837  GTESTVITGVDIVMNHHLQETSFTKEAYKKYIKDYMKSIKGKLEEQRPERVKPFMTGAAE 1016
            GTESTVITGVDIVMNHHLQETSFTKEAYKKYIKDYMKSIKGKLEEQRPERVKPFMTGAAE
Sbjct: 61   GTESTVITGVDIVMNHHLQETSFTKEAYKKYIKDYMKSIKGKLEEQRPERVKPFMTGAAE 120

Query: 1017 QIKHILANFKNYQ 1055
            QIKHILANFKNYQ
Sbjct: 121  QIKHILANFKNYQ 133


>ref|XP_854430.1| PREDICTED: similar to Neuromedin-B receptor (NMB-R)
           (Neuromedin-B-preferring bombesin receptor) [Canis
           familiaris].
          Length = 513

 Score = 60.8 bits (146), Expect = 3e-09
 Identities = 38/98 (38%), Positives = 46/98 (46%)
 Frame = -2

Query: 914 FLCEAGFLQVMVHDNIDTSDYCAFGTFALGPFSGGISTNERVINVTLCPTDHLPLHLQTQ 735
           F CE G LQV+V DNI+T D C   TF  GP     S               +   L + 
Sbjct: 4   FFCEFGLLQVIVRDNINTRDDCVLDTFPPGPSVKAFSA---------MSGSSVSYWLYSP 54

Query: 734 PVRDLPDLVDVGKHLIMADEVPVDDHDGGWRETTAALA 621
           P             LIMADEVPVDDHD GW+E+ ++ A
Sbjct: 55  PSPGT-------TQLIMADEVPVDDHDNGWKESMSSRA 85


  Database: RefSeq49_CP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 18,874,504
  Number of sequences in database:  33,336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33336
Number of Hits to DB: 37,330,166
Number of extensions: 842873
Number of successful extensions: 2657
Number of sequences better than 1.0e-05: 8
Number of HSP's gapped: 2656
Number of HSP's successfully gapped: 8
Length of query: 470
Length of database: 18,874,504
Length adjustment: 106
Effective length of query: 364
Effective length of database: 15,340,888
Effective search space: 5584083232
Effective search space used: 5584083232
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)

BLASTN 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ADR01_0072_B01
         (1410 letters)

Database: Sscrofa_10.2.fasta 
           4582 sequences; 2,808,509,378 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Sscrofa_Chr05                                                        1306   0.0  
Sscrofa_Chr14                                                         908   0.0  
Sscrofa_Chr08                                                         868   0.0  
Sscrofa_Chr01                                                         813   0.0  
gb|GL893730.1| Sus scrofa unplaced genomic scaffold chrU_scaffol...   702   0.0  
Sscrofa_Chr17                                                         682   0.0  
Sscrofa_Chr13                                                         670   0.0  
Sscrofa_Chr04                                                         260   2e-66
gb|JH118647.1| Sus scrofa unplaced genomic scaffold ChrUScaf1461      252   5e-64
Sscrofa_Chr02                                                         119   4e-24

>Sscrofa_Chr05 
||          Length = 111506441

 Score = 1306 bits (659), Expect = 0.0
 Identities = 776/817 (94%), Gaps = 9/817 (1%)
 Strand = Plus / Minus

                                                                            
Query: 574      gccgctccggctgcaccgcgctcgctctgagctcccggttcctgctaagctagcgccgcc 633
                ||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||
Sbjct: 16184160 gccgctccggctgcaccgcgcccgctctgagctcctggttcctgctaagctagcgccgcc 16184101

                                                                            
Query: 634      gtcgtctccctccagccgccatcatgatcatctaccgggacctcatcagccatgatgaga 693
                 |||||||||||||||| ||||||||||||||||||||| ||||||||||||  ||||||
Sbjct: 16184100 atcgtctccctccagccaccatcatgatcatctaccggggcctcatcagccacaatgaga 16184041

                                                                            
Query: 694      tgttttccgacatctacaagatccgggagatcgcggacgggctgtgtctggaggtggagg 753
                ||||||||| | | ||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16184040 tgttttccgtcgtataccagatccgggagatcgcggacgggctgtgtctggaggtggagg 16183981

                                                                            
Query: 754      ggaagatggtcagtaggacagagggtaacattgatgactcgctcattggtggaaatgcct 813
                |||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||
Sbjct: 16183980 ggaagatggtcagtaggacagaggataacattgatgacttgctcattggtggaaatgcct 16183921

                                                                            
Query: 814      ccgctgaagggcccgagggcgaaggtaccgaaagcacagtaatcactggtgtcgatattg 873
                ||||||||||||| |||||||||||||| ||||||||||||||||||||| |||||||||
Sbjct: 16183920 ccgctgaagggccggagggcgaaggtactgaaagcacagtaatcactggtatcgatattg 16183861

                                                                            
Query: 874      tcatgaaccatcacctgcaggaaaccagcttcacaaaggaagcctacaagaagtacatca 933
                || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16183860 tcctgaaccatcacctgcaggaaaccagcttcacaaaggaagcctacaagaagtacatca 16183801

                                                                            
Query: 934      aagattatatgaagtcaatcaaagggaaactcgaagaacagagaccagaaagagtaaaac 993
                |||||||||||| ||||||||||       | ||||||||||||||||||||||||||||
Sbjct: 16183800 aagattatatgaggtcaatcaaa-------ttgaagaacagagaccagaaagagtaaaac 16183748

                                                                            
Query: 994      cttttatgacaggagctgcagaacaaatcaagcacatccttgctaatttcaaaaactatc 1053
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 16183747 cttttatgacaggagctgcagaacaaatcaagcacatccttgctaatttcaaaaattatc 16183688

                                                                            
Query: 1054     agttctttattggtgaaaacatgaatccagacggcatggttgctctgctggactaccgtg 1113
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16183687 agttctttattggtgaaaacatgaatccagacggcatggttgctctgctggactaccgtg 16183628

                                                                            
Query: 1114     aggatggtgtgactccatatatgattttctttaaggatggcttagaaatggaaaaatgtt 1173
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16183627 aggatggtgtgactccatatatgattttctttaaggatggcttagaaatggaaaaatgtt 16183568

                                                                            
Query: 1174     aacaaatttggctgttgggatcggatctatcacccgttgtcataactggctggccactgc 1233
                |||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 16183567 aacaaatttggccgttgggatcggatctatcacccgtcgtcataactggctggccactgc 16183508

                                                                            
Query: 1234     tttccatccacaaaacaccaggacttagacaagtgggactgatggcatcttgagctcgtt 1293
                ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16183507 ttttcatccacaaaacaccaggacttagacaagtgggactgatggcatcttgagctcgtt 16183448

                                                                            
Query: 1294     attttgacattgatttttctttggagcggaggcattgtttttgagg--nnnnnnncatgt 1351
                ||||||||| ||||||||||||||||||||||||||||||||||||         |||||
Sbjct: 16183447 attttgacactgatttttctttggagcggaggcattgtttttgaggaaaaaaaaacatgt 16183388

                                                     
Query: 1352     catgtaggttgtctaaaaataaaatgcatttaaactc 1388
                ||||||| |||||||||||||||||||||||||||||
Sbjct: 16183387 catgtagattgtctaaaaataaaatgcatttaaactc 16183351



 Score =  743 bits (375), Expect = 0.0
 Identities = 633/719 (88%), Gaps = 15/719 (2%)
 Strand = Plus / Plus

                                                                            
Query: 598      ctctgagctcccggttcctgctaagctagcgccgccgtcgtctccctccagccgccatca 657
                ||||||||||| || ||||| | ||||| | || || || |||||||||||| |||||||
Sbjct: 63389255 ctctgagctccaggctcctgttcagctaacaccaccttcatctccctccagctgccatca 63389314

                                                                            
Query: 658      tgatcatctaccgggacctcatcagccatgatgagatgttttccgacatctacaagatcc 717
                ||||| ||||| ||||||||| ||| || ||||||||||| || ||||||||||||||| 
Sbjct: 63389315 tgatcgtctactgggacctcagcagacacgatgagatgttctctgacatctacaagatct 63389374

                                                                            
Query: 718      gggagatcgcggacgggctgtgtctggaggtggaggggaagatggtcagtaggacagagg 777
                ||||||| | |||| ||||||||| ||||| |||||||||||||||||||||||||||||
Sbjct: 63389375 gggagatggaggacaggctgtgtcgggaggaggaggggaagatggtcagtaggacagagg 63389434

                                                                            
Query: 778      gtaacattgatgactcgctcattggtggaaatgcctccgctgaagggcccgagggcgaag 837
                ||||||||||||||||||||||| |||||||||| ||| ||||||| ||||| || ||||
Sbjct: 63389435 gtaacattgatgactcgctcattagtggaaatgcatcccctgaaggtcccgaaggtgaag 63389494

                                                                            
Query: 838      gtacc-gaaagcacagtaatcactggtgtcgatattgtcatgaaccatcacctgcaggaa 896
                ||||| ||||||| ||||||||||||||| | ||||||| ||||||||||||||||||||
Sbjct: 63389495 gtacctgaaagcaaagtaatcactggtgttgctattgtcctgaaccatcacctgcaggaa 63389554

                                                                            
Query: 897      accagcttcacaaaggaagcctacaagaagtacatcaaagattatatgaagtcaatcaaa 956
                |||||||||||||| |||| |||||||| ||||||||||||||| |||||||||||||||
Sbjct: 63389555 accagcttcacaaaagaagtctacaagatgtacatcaaagattacatgaagtcaatcaaa 63389614

                                                                            
Query: 957      gggaaactcgaagaacagagaccagaaagagtaaaaccttttatgacaggagctgcagaa 1016
                 ||||||| |||||||||||| |||||||||||||||||||||||||||| ||||| |||
Sbjct: 63389615 aggaaacttgaagaacagagaacagaaagagtaaaaccttttatgacaggggctgctgaa 63389674

                                                                            
Query: 1017     caaatcaagcacatccttgctaatttcaaaaa-------------ctatcagttctttat 1063
                || ||||||||||||| |||||||||||||||             ||||| |||||||||
Sbjct: 63389675 cacatcaagcacatccgtgctaatttcaaaaaaaaaaaaaaaaacctatctgttctttat 63389734

                                                                            
Query: 1064     tggtgaaaacatgaatccagacggcatggttgctctgctggactaccgtgaggatggtgt 1123
                ||||||||| |||||||||||   |||||||| | | |||||||||| |||||||||| |
Sbjct: 63389735 tggtgaaaatatgaatccagatatcatggttgtttttctggactaccatgaggatggtat 63389794

                                                                            
Query: 1124     gactccatatatgattttctttaaggatggcttagaaatggaaaaatgttaacaaatttg 1183
                ||  ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63389795 gagcccagatatgattttctttaaggatggcttagaaatggaaaaatgttaacaaatttg 63389854

                                                                            
Query: 1184     gctgttgggatcggatctatcacccgttgtcataactggctggccactgctttccatcca 1243
                ||||||    || || |||||| | ||||||||||||||||||||||||| || ||||| 
Sbjct: 63389855 gctgtt-acttcagacctatcatctgttgtcataactggctggccactgcctttcatccc 63389913

                                                                           
Query: 1244     caaaacaccaggacttagacaagtgggactgatggcatcttgagctcgttattttgaca 1302
                 ||||||||||||||||||||| ||||||||||| ||| ||||||||||||||||||||
Sbjct: 63389914 taaaacaccaggacttagacaaatgggactgatgccattttgagctcgttattttgaca 63389972



 Score = 65.9 bits (33), Expect = 6e-08
 Identities = 39/41 (95%)
 Strand = Plus / Plus

                                                         
Query: 1347     catgtcatgtaggttgtctaaaaataaaatgcatttaaact 1387
                ||||||||| ||||| |||||||||||||||||||||||||
Sbjct: 63390064 catgtcatgcaggttatctaaaaataaaatgcatttaaact 63390104



 Score = 60.0 bits (30), Expect = 3e-06
 Identities = 33/34 (97%)
 Strand = Plus / Plus

                                                  
Query: 1209     gttgtcataactggctggccactgctttccatcc 1242
                |||||||||||||||||||||||||||| |||||
Sbjct: 63389221 gttgtcataactggctggccactgcttttcatcc 63389254


>Sscrofa_Chr14 
||          Length = 153851969

 Score =  908 bits (458), Expect = 0.0
 Identities = 669/736 (90%), Gaps = 10/736 (1%)
 Strand = Plus / Minus

                                                                             
Query: 582       ggctgcaccgcgctcgctctgagctcccggttcctgctaagctagcgccgccg----tcg 637
                 ||||||||| || || ||||||||||| || |||||||||||||| |||||||    || 
Sbjct: 124053513 ggctgcaccacgttcactctgagctcctggctcctgctaagctagtgccgccggctgtca 124053454

                                                                             
Query: 638       tctccctccagccgccatcatgatcatctaccgggacctcatcagccatgatgagatgtt 697
                 || ||||||||| |||||||||||||||| |||||||||||||||||||||    |||||
Sbjct: 124053453 tccccctccagctgccatcatgatcatctcccgggacctcatcagccatgaa---atgtt 124053397

                                                                             
Query: 698       ttccgacatctacaagatccgggagatcgcggacgggctgtgtctggaggtggaggggaa 757
                  |||||||||| ||||| ||||||||||| ||| ||||||||||||||||||||||||||
Sbjct: 124053396 ctccgacatctgcaagacccgggagatcgtggatgggctgtgtctggaggtggaggggaa 124053337

                                                                             
Query: 758       gatggtcagtaggacagagggtaacattgatgactcgctcattggtggaaatgcctccgc 817
                 |||||||||||||||||||| | ||||||||||||||| |||||||||||||||||||||
Sbjct: 124053336 gatggtcagtaggacagaggatgacattgatgactcgcccattggtggaaatgcctccgc 124053277

                                                                             
Query: 818       tgaagggcccgagggcgaaggtaccgaaagcacagtaatcactggtgtcgatattgtcat 877
                 ||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||| ||
Sbjct: 124053276 tgaagggcccgagggtgaaggtaccgaaagcacagcaatcactggtgtcgatattgttat 124053217

                                                                             
Query: 878       gaaccatcacctgcaggaaaccagcttcacaaaggaagcctacaagaagtacatcaaaga 937
                 | |||||||||||||||||||||||||||  |||||||||||||||||||||| ||||||
Sbjct: 124053216 ggaccatcacctgcaggaaaccagcttcatgaaggaagcctacaagaagtacaccaaaga 124053157

                                                                             
Query: 938       ttatatgaagtcaatcaaagggaaactcgaagaacagagaccagaaagagtaaaaccttt 997
                 ||| |||||||||||||||||||| || |||||||||||| |||||||||||||||||||
Sbjct: 124053156 ttacatgaagtcaatcaaagggaagcttgaagaacagagagcagaaagagtaaaaccttt 124053097

                                                                             
Query: 998       tatgacaggagctgcagaacaaatcaagcacatccttgctaatttcaaaaactatcagtt 1057
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 124053096 tatgacaggagctgcagaacaaatcaagcacatccttgctaatttcaaaaactgtcagtt 124053037

                                                                             
Query: 1058      ctttattggtgaaaacatgaatccagacggcatggttgctctgctggactaccgtgagga 1117
                 ||| ||||||||||||||||||||||||||||||||||||||||||||||  | ||||||
Sbjct: 124053036 cttcattggtgaaaacatgaatccagacggcatggttgctctgctggactgtcatgagga 124052977

                                                                             
Query: 1118      tggtgtgactccatatatgattttctttaaggatggcttagaaatggaaaaatgttaaca 1177
                 | |||||||||  |||||||||| ||||||||||||||||||||||||||||| ||||||
Sbjct: 124052976 tagtgtgactctgtatatgatttcctttaaggatggcttagaaatggaaaaatattaaca 124052917

                                                                             
Query: 1178      aatttggctgttgggatcggatctatcacccgttgtcataactggctggccactgctttc 1237
                 ||||||||||||    | ||| |||||||| || ||||||||||||||||| ||||||| 
Sbjct: 124052916 aatttggctgtt-actttggacctatcacctgtagtcataactggctggccgctgctttt 124052858

                                                                             
Query: 1238      catccacaaaacaccaggactt--agacaagtgggactgatggcatcttgagctcgttat 1295
                  ||||| |||||| ||||||||  |||||| |||||| ||||||||| ||||||| || |
Sbjct: 124052857 tatccagaaaacatcaggacttagagacaaatgggaccgatggcatcctgagctcatttt 124052798

                                 
Query: 1296      tttgacattgattttt 1311
                 ||||||||||||||||
Sbjct: 124052797 tttgacattgattttt 124052782



 Score =  117 bits (59), Expect = 2e-23
 Identities = 65/67 (97%)
 Strand = Plus / Plus

                                                                            
Query: 994      cttttatgacaggagctgcagaacaaatcaagcacatccttgctaatttcaaaaactatc 1053
                ||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||
Sbjct: 44815938 cttttatgacaggagctgcagcacaaatgaagcacatccttgctaatttcaaaaactatc 44815997

                       
Query: 1054     agttctt 1060
                |||||||
Sbjct: 44815998 agttctt 44816004



 Score = 81.8 bits (41), Expect = 9e-13
 Identities = 96/114 (84%), Gaps = 4/114 (3%)
 Strand = Plus / Plus

                                                                            
Query: 691      agatgttttccgacatctacaagatccgggagatcgcggacgggctgtgtctggaggtgg 750
                ||||||| || ||| |||||||| |||||||||| | ||||||||||| ||  ||||| |
Sbjct: 44815544 agatgttctctgacgtctacaaggtccgggagattgtggacgggctgtatccagaggtag 44815603

                                                                      
Query: 751      aggggaagatggtcagtaggacagagggtaacattgatgactcgctcattggtg 804
                ||||||||||    |||||||||||||| |||| ||| ||||| ||||||||||
Sbjct: 44815604 aggggaagat----agtaggacagaggggaacaatgacgactcactcattggtg 44815653



 Score = 77.8 bits (39), Expect = 1e-11
 Identities = 159/195 (81%), Gaps = 3/195 (1%)
 Strand = Plus / Plus

                                                                            
Query: 1146     aaggatggcttagaaatggaaaaatgttaacaaatttggctgttgggatcggatctatca 1205
                |||||||| |||||  ||||||||||| ||||| || |||||||    | ||| ||||||
Sbjct: 44816469 aaggatggtttagatgtggaaaaatgtgaacaagttgggctgttactct-ggagctatca 44816527

                                                                            
Query: 1206     cccgttgtcataactggctggccactgctttccatccacaaaacaccaggacttagacaa 1265
                || ||||||||| ||| ||| |||| ||||| |||||| | | ||||||  |||||| ||
Sbjct: 44816528 cctgttgtcata-ctgactgaccacagcttttcatccatacaccaccagtgcttagataa 44816586

                                                                            
Query: 1266     gtgggactgatggcatcttgagctcgttattttgacattgatttttctttggagcggagg 1325
                 || |||||||||||| |||||||| | |||||||  ||  ||||| ||||||| |||||
Sbjct: 44816587 atgagactgatggcattttgagctcttaattttgatttttttttttttttggagtggagg 44816646

                               
Query: 1326     ca-ttgtttttgagg 1339
                || ||||||||||||
Sbjct: 44816647 catttgtttttgagg 44816661



 Score = 60.0 bits (30), Expect = 3e-06
 Identities = 30/30 (100%)
 Strand = Plus / Minus

                                               
Query: 1348      atgtcatgtaggttgtctaaaaataaaatg 1377
                 ||||||||||||||||||||||||||||||
Sbjct: 124052712 atgtcatgtaggttgtctaaaaataaaatg 124052683


>Sscrofa_Chr08 
||          Length = 148491826

 Score =  868 bits (438), Expect = 0.0
 Identities = 651/717 (90%), Gaps = 5/717 (0%)
 Strand = Plus / Plus

                                                                            
Query: 597      gctctgagctcccggttcctgctaagctagcgccgccgtcgtctccctccagccgccatc 656
                ||||| ||||||| | ||||||||||||| |||||  ||||||| ||||||||| ||| |
Sbjct: 96417233 gctctaagctcccagctcctgctaagctaacgccgtggtcgtctgcctccagccaccacc 96417292

                                                                            
Query: 657      atgatcatctaccgggacctcatcagccatgatgagatgttttccgacatctacaagatc 716
                ||||   |||||| ||||||||||||||||||||||||||||||| ||||||| ||||||
Sbjct: 96417293 atgagtgtctaccaggacctcatcagccatgatgagatgttttccaacatctataagatc 96417352

                                                                            
Query: 717      cgggagatcgcggacgggctgtgtctggaggtggaggggaagatggtcagtaggacagag 776
                |||||||| ||||||||||||||||||||||||||| ||||||||||||||||   ||||
Sbjct: 96417353 cgggagattgcggacgggctgtgtctggaggtggagaggaagatggtcagtagagtagag 96417412

                                                                            
Query: 777      ggtaacattgatgactcgctcattggtggaaatgcctccgctgaagggcccgagggcgaa 836
                ||||||| ||||||||||||||||||||||||||||| ||||| ||| ||| ||||| ||
Sbjct: 96417413 ggtaacactgatgactcgctcattggtggaaatgcctacgctggaggtccc-agggccaa 96417471

                                                                            
Query: 837      ggtaccgaaagcacagtaatcactggtgtcgatattgtcatgaaccatcacctgcaggaa 896
                ||||| |||||||||||||||||||||||||||||||| |||||| | ||||||||||||
Sbjct: 96417472 ggtac-gaaagcacagtaatcactggtgtcgatattgttatgaactaccacctgcaggaa 96417530

                                                                            
Query: 897      accagcttcacaaaggaagcctacaagaagtacatcaaagattatatgaagtcaatcaaa 956
                ||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||
Sbjct: 96417531 accagcttcacaaaggaagcctataagaagtacatcaaagattacatgaagtcaatcaaa 96417590

                                                                            
Query: 957      ggga--aactcgaagaacagagaccagaaagagtaaaaccttttatgacaggagctgcag 1014
                ||||  |||| ||||||||||| | |||||||||||||||||||||||||||||||  ||
Sbjct: 96417591 gggagaaacttgaagaacagagccaagaaagagtaaaaccttttatgacaggagctagag 96417650

                                                                            
Query: 1015     aacaaatcaagcacatccttgctaatttcaaaaactatcagttctttattggtgaaaaca 1074
                ||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||| |
Sbjct: 96417651 aacaaatcaagcacatccttgctaatttcaaaaactatcagttttttattggtaaaaata 96417710

                                                                            
Query: 1075     tgaatccagacggcatggttgctctgctggactaccgtgaggatggtgtgactccatata 1134
                 ||||||||| |||||| |||||||||||| | ||||||| |||| ||||||||| ||||
Sbjct: 96417711 ggaatccagatggcatgattgctctgctgggccaccgtgaagatgatgtgactccgtata 96417770

                                                                            
Query: 1135     tgattttctttaaggatggcttagaaatggaaaaatgttaacaaatttggctgttgggat 1194
                ||||||||||||||||||||||||||||||||||||||||||||||||| |||||    |
Sbjct: 96417771 tgattttctttaaggatggcttagaaatggaaaaatgttaacaaatttgtctgtt-actt 96417829

                                                                            
Query: 1195     cggatctatcacccgttgtcataactggctggccactgctttccatccacaaaacaccag 1254
                 ||||||||  || ||  |||||||||||||||| ||| ||| |||||||||||||||||
Sbjct: 96417830 tggatctattgcctgtcatcataactggctggccgctgtttttcatccacaaaacaccag 96417889

                                                                         
Query: 1255     gacttagacaagtgggactgatggcatcttgagctcgttattttgacattgattttt 1311
                ||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 96417890 gacttagacaaatgggactgatggcatcttgagcttgttattttgacattgattttt 96417946



 Score =  868 bits (438), Expect = 0.0
 Identities = 651/717 (90%), Gaps = 5/717 (0%)
 Strand = Plus / Minus

                                                                            
Query: 597      gctctgagctcccggttcctgctaagctagcgccgccgtcgtctccctccagccgccatc 656
                ||||| ||||||| | ||||||||||||| |||||  ||||||| ||||||||| ||| |
Sbjct: 96662086 gctctaagctcccagctcctgctaagctaacgccgtggtcgtctgcctccagccaccacc 96662027

                                                                            
Query: 657      atgatcatctaccgggacctcatcagccatgatgagatgttttccgacatctacaagatc 716
                ||||   |||||| ||||||||||||||||||||||||||||||| ||||||| ||||||
Sbjct: 96662026 atgagtgtctaccaggacctcatcagccatgatgagatgttttccaacatctataagatc 96661967

                                                                            
Query: 717      cgggagatcgcggacgggctgtgtctggaggtggaggggaagatggtcagtaggacagag 776
                |||||||| ||||||||||||||||||||||||||| ||||||||||||||||   ||||
Sbjct: 96661966 cgggagattgcggacgggctgtgtctggaggtggagaggaagatggtcagtagagtagag 96661907

                                                                            
Query: 777      ggtaacattgatgactcgctcattggtggaaatgcctccgctgaagggcccgagggcgaa 836
                ||||||| ||||||||||||||||||||||||||||| ||||| ||| ||| ||||| ||
Sbjct: 96661906 ggtaacactgatgactcgctcattggtggaaatgcctacgctggaggtccc-agggccaa 96661848

                                                                            
Query: 837      ggtaccgaaagcacagtaatcactggtgtcgatattgtcatgaaccatcacctgcaggaa 896
                ||||| |||||||||||||||||||||||||||||||| |||||| | ||||||||||||
Sbjct: 96661847 ggtac-gaaagcacagtaatcactggtgtcgatattgttatgaactaccacctgcaggaa 96661789

                                                                            
Query: 897      accagcttcacaaaggaagcctacaagaagtacatcaaagattatatgaagtcaatcaaa 956
                ||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||
Sbjct: 96661788 accagcttcacaaaggaagcctataagaagtacatcaaagattacatgaagtcaatcaaa 96661729

                                                                            
Query: 957      ggga--aactcgaagaacagagaccagaaagagtaaaaccttttatgacaggagctgcag 1014
                ||||  |||| ||||||||||| | |||||||||||||||||||||||||||||||  ||
Sbjct: 96661728 gggagaaacttgaagaacagagccaagaaagagtaaaaccttttatgacaggagctagag 96661669

                                                                            
Query: 1015     aacaaatcaagcacatccttgctaatttcaaaaactatcagttctttattggtgaaaaca 1074
                ||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||| |
Sbjct: 96661668 aacaaatcaagcacatccttgctaatttcaaaaactatcagttttttattggtaaaaata 96661609

                                                                            
Query: 1075     tgaatccagacggcatggttgctctgctggactaccgtgaggatggtgtgactccatata 1134
                 ||||||||| |||||| |||||||||||| | ||||||| |||| ||||||||| ||||
Sbjct: 96661608 ggaatccagatggcatgattgctctgctgggccaccgtgaagatgatgtgactccgtata 96661549

                                                                            
Query: 1135     tgattttctttaaggatggcttagaaatggaaaaatgttaacaaatttggctgttgggat 1194
                ||||||||||||||||||||||||||||||||||||||||||||||||| |||||    |
Sbjct: 96661548 tgattttctttaaggatggcttagaaatggaaaaatgttaacaaatttgtctgtt-actt 96661490

                                                                            
Query: 1195     cggatctatcacccgttgtcataactggctggccactgctttccatccacaaaacaccag 1254
                 ||||||||  || ||  |||||||||||||||| ||| ||| |||||||||||||||||
Sbjct: 96661489 tggatctattgcctgtcatcataactggctggccgctgtttttcatccacaaaacaccag 96661430

                                                                         
Query: 1255     gacttagacaagtgggactgatggcatcttgagctcgttattttgacattgattttt 1311
                ||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 96661429 gacttagacaaatgggactgatggcatcttgagcttgttattttgacattgattttt 96661373



 Score =  654 bits (330), Expect = 0.0
 Identities = 613/702 (87%), Gaps = 4/702 (0%)
 Strand = Plus / Minus

                                                                             
Query: 611       gttcctgctaagctagcgccgccgtcgtctccctccagccgccatcatgatcatctaccg 670
                 ||||||||||| ||||| | || ||| |||||||||||| |||||| |||||||||||| 
Sbjct: 118356710 gttcctgctaacctagcactgctgtcatctccctccagctgccatcttgatcatctacca 118356651

                                                                             
Query: 671       ggacctcatcagccatgatgagatgttttccgacatctacaagatccgggagatcgcgga 730
                 | ||||||| ||||||||||||||| | || ||||||||||| |||| ||||||| | | 
Sbjct: 118356650 gaacctcataagccatgatgagatgctctctgacatctacaaaatccaggagatcacagt 118356591

                                                                             
Query: 731       cgggctgtgtctggaggtggaggggaagatggtcagtaggacagagggtaacattgatga 790
                  ||||||||| ||||||||||||||| || ||||||||||||||||||||||| ||||||
Sbjct: 118356590 tgggctgtgt-tggaggtggaggggatgacggtcagtaggacagagggtaacactgatga 118356532

                                                                             
Query: 791       ctcgctcattggtggaaatgcctccgctgaagggcccgagggcgaaggtaccg-aaagca 849
                 |||  |||||||| ||||||||||| ||||||||||| |||| |||||||||| ||||||
Sbjct: 118356531 ctccatcattggtagaaatgcctccactgaagggcccaagggtgaaggtaccggaaagca 118356472

                                                                             
Query: 850       cagtaatcactggtgtcgatattgtcatgaaccatcacctgcaggaaaccagcttcacaa 909
                 |||||||||| ||||| |||||||||| |||||||||| |||||||||||||||||||||
Sbjct: 118356471 cagtaatcacgggtgttgatattgtcaagaaccatcacttgcaggaaaccagcttcacaa 118356412

                                                                             
Query: 910       aggaagcctacaagaagtacatcaaagattatatgaagtcaatcaaagggaaactcgaag 969
                 | ||||||| | |||| |||||||||||||| ||||||||||||||||| ||||   |||
Sbjct: 118356411 aagaagcctgcgagaaatacatcaaagattacatgaagtcaatcaaaggaaaacataaag 118356352

                                                                             
Query: 970       aacagagaccagaaagagtaaaaccttttatgacaggagctgcagaacaaatcaagcaca 1029
                 ||||||| |||||||||||||||||||||||||| |||||  ||||||||||||||||||
Sbjct: 118356351 aacagaggccagaaagagtaaaaccttttatgactggagccacagaacaaatcaagcaca 118356292

                                                                             
Query: 1030      tccttgctaatttca-aaaactatcagttctttattggtgaaaacatgaatccagacggc 1088
                 ||||||||||||||| ||||  |||  |   ||||||||||||||||| ||||||| |||
Sbjct: 118356291 tccttgctaatttcacaaaatgatccatgtgttattggtgaaaacatgcatccagatggc 118356232

                                                                             
Query: 1089      atggttgctctgctggactaccgtgaggatggtgtgactccatatatgattttctttaag 1148
                 |||| ||||  |  |||||||| |||| || | |||| ||||| ||||||||||||||||
Sbjct: 118356231 atggctgcttggtgggactaccatgagaatagagtgattccatgtatgattttctttaag 118356172

                                                                             
Query: 1149      gatggcttagaaatggaaaaatgttaacaaatttggctgttgggatcggatctatcaccc 1208
                 |||||||||||||||||||| ||||| ||||||||||||||    | |||||||||||| 
Sbjct: 118356171 gatggcttagaaatggaaaactgttagcaaatttggctgtt-actttggatctatcacct 118356113

                                                                             
Query: 1209      gttgtcataactggctggccactgctttccatccacaaaacaccaggacttagacaagtg 1268
                  | ||||||||||||||||  |||  || |||||||| ||||||||||| ||||||| ||
Sbjct: 118356112 atcgtcataactggctggctgctgtgtttcatccacacaacaccaggacgtagacaaatg 118356053

                                                           
Query: 1269      ggactgatggcatcttgagctcgttattttgacattgatttt 1310
                 |||||||||| |||||||| | ||||||||||||||||||||
Sbjct: 118356052 ggactgatggaatcttgagttggttattttgacattgatttt 118356011



 Score =  373 bits (188), Expect = e-100
 Identities = 233/253 (92%), Gaps = 1/253 (0%)
 Strand = Plus / Plus

                                                                            
Query: 1        ttgtacctgtcttgagaggataatttaatatactcttgaaactcttnnnnnnnnnttccc 60
                ||||||||||||||||||||||||||||||||||||||||||||||         |||||
Sbjct: 63765834 ttgtacctgtcttgagaggataatttaatatactcttgaaactcttaaaaaaaaattccc 63765893

                                                                            
Query: 61       tggaaagtaaaagtatccactttaagggattagaggtaatttaactccctannnnnnnnn 120
                |||||||||||||||||||||||||||||||||||||||||||||||||||         
Sbjct: 63765894 tggaaagtaaaagtatccactttaagggattagaggtaatttaactccctattttttttt 63765953

                                                                            
Query: 121      nnctgtattgtagaaaaatgattgtttgaataaatgtcactgttttgtgtacattcgtta 180
                  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63765954 t-ctgtattgtagaaaaatgattgtttgaataaatgtcactgttttgtgtacattcgtta 63766012

                                                                            
Query: 181      aactgtatgagatcagtaaaccactttctgagttgtaatagtagcataaaaatatgggct 240
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63766013 aactgtatgagatcagtaaaccactttctgagttgtaatagtagcataaaaatatgggct 63766072

                             
Query: 241      acgtttgcgtgac 253
                |||||||||||||
Sbjct: 63766073 acgtttgcgtgac 63766085



 Score = 61.9 bits (31), Expect = 9e-07
 Identities = 34/35 (97%)
 Strand = Plus / Plus

                                                   
Query: 508      tttttaaaaggtattgtttatatctctacctcttt 542
                ||||| |||||||||||||||||||||||||||||
Sbjct: 63766341 ttttttaaaggtattgtttatatctctacctcttt 63766375


>Sscrofa_Chr01 
||          Length = 315321322

 Score =  813 bits (410), Expect = 0.0
 Identities = 706/804 (87%), Gaps = 26/804 (3%)
 Strand = Plus / Plus

                                                                            
Query: 597      gctctgagctcccggttcctgctaagctagcgccgcc-gtcgtctccctccagccgccat 655
                |||||||||||| || ||||||||||||| | | ||| ||||||||||| ||||||||||
Sbjct: 77591251 gctctgagctcctggctcctgctaagctaacactgcctgtcgtctcccttcagccgccat 77591310

                                                                            
Query: 656      catgatcatctaccgggacctcatcagccatgatgagatgttttccgacatctacaagat 715
                |||||||||||||||| ||||||||||||||||||||||| | ||| |||||||||||||
Sbjct: 77591311 catgatcatctaccgg-acctcatcagccatgatgagatgctctcccacatctacaagat 77591369

                                                                            
Query: 716      ccgggagatcgcggacgggctgtgtctggaggtggaggggaagatggtcagtaggacaga 775
                 |||||||| || ||||||||||||||||||||| |||||||||||||||| ||||||||
Sbjct: 77591370 gcgggagattgctgacgggctgtgtctggaggtgaaggggaagatggtcagcaggacaga 77591429

                                                                            
Query: 776      gggtaacattgatgactcgctcattggtggaaatgcctccgctgaagggcccgagggcga 835
                 ||||||||||||||||||||||||||||||||||||| | ||||||||||  |||||||
Sbjct: 77591430 aggtaacattgatgactcgctcattggtggaaatgcct-ctctgaagggcctcagggcga 77591488

                                                                            
Query: 836      aggtaccgaaagcacagtaatcactggtgtcgatattgtcatgaaccatcacctgcagga 895
                |||||||| || ||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 77591489 aggtaccggaaacacagtaatcactggtgtcgatattgttatgaaccatcacctgcagga 77591548

                                                                            
Query: 896      aaccagcttcacaaaggaagcctacaagaagtacatcaaagattatatgaagtcaatcaa 955
                ||||||||||||||||           ||||||||||||||||||  |||||| ||||||
Sbjct: 77591549 aaccagcttcacaaag-----------gaagtacatcaaagattacgtgaagttaatcaa 77591597

                                                                            
Query: 956      agggaaactcgaagaacagagaccagaaagagtaaaaccttttatgacaggagctgcaga 1015
                ||||||||| ||||||||  |||||| ||||||| |||||||||||||||||||||||| 
Sbjct: 77591598 agggaaacttgaagaacaaggaccagcaagagtacaaccttttatgacaggagctgcagg 77591657

                                                                            
Query: 1016     acaaatcaagcacatccttgctaatttcaaaaactatcagttctttattggtgaaaacat 1075
                ||||||||||||||| |||||| |||||||||||||| |||||| |||||||||||||||
Sbjct: 77591658 acaaatcaagcacattcttgctcatttcaaaaactattagttctctattggtgaaaacat 77591717

                                                                            
Query: 1076     gaatccagacggcatggttgctctgctggactaccgtgaggatggtgtgactccatatat 1135
                ||||||||| ||||||||| |||||||||| |||||| |||||| |||||||||||||||
Sbjct: 77591718 gaatccagatggcatggttcctctgctggagtaccgtcaggatgatgtgactccatatat 77591777

                                                                            
Query: 1136     gattttctttaaggatggcttagaaatggaaaaatgttaacaaatttggctgttgggatc 1195
                ||||||||||||||||||||||||||||| ||||||||| |||  |||||||||    | 
Sbjct: 77591778 gattttctttaaggatggcttagaaatgggaaaatgttagcaagattggctgtt-acttt 77591836

                                                                            
Query: 1196     ggatctatcacccgttgtcataactggctggccactgctttccatccacaaaacaccagg 1255
                || ||||||||| ||  |||||||||||||||  ||||||| ||||| ||||||||||||
Sbjct: 77591837 ggctctatcacctgtcctcataactggctggctgctgcttttcatccgcaaaacaccagg 77591896

                                                                            
Query: 1256     acttagacaagtgggactgatggcatcttgagctcgttattttga--------cattgat 1307
                |||||||||| |||||||||||||||||||||||| |||||||||          ||  |
Sbjct: 77591897 acttagacaaatgggactgatggcatcttgagctcattattttgattttttttttttttt 77591956

                                                                            
Query: 1308     ttttctttggagcggaggcattgtttttg---aggnnnnnnncatgtcatgtaggttgtc 1364
                |||| |||||||| |||||||||||||||   |         ||||||||||||||||||
Sbjct: 77591957 ttttttttggagcagaggcattgtttttgacaaaaaaaaagacatgtcatgtaggttgtc 77592016

                                        
Query: 1365     taaaaataaaatgcatttaaactc 1388
                ||||||||||||||||||||||||
Sbjct: 77592017 taaaaataaaatgcatttaaactc 77592040


>gb|GL893730.1| Sus scrofa unplaced genomic scaffold chrU_scaffold2466
          Length = 75956

 Score =  702 bits (354), Expect = 0.0
 Identities = 606/685 (88%), Gaps = 5/685 (0%)
 Strand = Plus / Minus

                                                                         
Query: 598   ctctgagctcccggttcctgctaagctagcgccgccgtcgtctccctccagccgccatca 657
             ||||||| |||||| ||||||||||||   ||||  ||| |||||||||||||||| |||
Sbjct: 20751 ctctgagttcccggctcctgctaagctgctgccgtggtcatctccctccagccgccctca 20692

                                                                         
Query: 658   tgatcatctaccgggacctcatcagccatgatgagatgttttccgacatctacaagatcc 717
             || ||||||||| |||||||||||||||  |||||||||| |||  ||||||||||||||
Sbjct: 20691 tggtcatctaccaggacctcatcagccacaatgagatgttctccagcatctacaagatcc 20632

                                                                         
Query: 718   gggagatcgcggacgggctgtgtctggaggtggaggggaagatggtcagtaggacagagg 777
              |||||||| |||||||||||||||||||  |||||||||||||||||||||||||||||
Sbjct: 20631 aggagatcgtggacgggctgtgtctggagacggaggggaagatggtcagtaggacagagg 20572

                                                                         
Query: 778   gtaacattgatgactcgctcattggtggaaatgcctccgctgaagggcccgagggcgaag 837
             || |||| |||||||||||| |||||||||||||||| |||||||||||||||||| |||
Sbjct: 20571 gtgacatagatgactcgctccttggtggaaatgcctctgctgaagggcccgagggcaaag 20512

                                                                         
Query: 838   gtaccgaaagcacagtaatcactggtgtcgatattgtcatgaaccatcacctgcaggaaa 897
             ||||| ||||| |||||||||||||||||||| |||| | ||||||||||||||| ||||
Sbjct: 20511 gtacccaaagcccagtaatcactggtgtcgatgttgttaggaaccatcacctgcaagaaa 20452

                                                                         
Query: 898   ccagcttcacaaaggaagcctacaagaagtacatcaaagattatatgaagtcaatcaaag 957
             |||||||||| ||||||||  | |||||  |||||| |||| | ||||||| ||||||||
Sbjct: 20451 ccagcttcacgaaggaagctgagaagaaaaacatcagagatgacatgaagttaatcaaag 20392

                                                                         
Query: 958   ggaaactcgaagaacagagaccagaaagagtaaaaccttttatgacaggagctgcagaac 1017
             ||||||  |||||| || |||||||||||||||||||||||||| |||| |||||||| |
Sbjct: 20391 ggaaacgtgaagaa-agggaccagaaagagtaaaaccttttatggcaggtgctgcagagc 20333

                                                                         
Query: 1018  aaatcaagcacatccttgctaatttcaaaaactatcagttctttattggtgaaaacatga 1077
             ||||| |||||||||||||| | ||||||||  |||||||||| ||||||||||||||||
Sbjct: 20332 aaatccagcacatccttgctgacttcaaaaaggatcagttcttcattggtgaaaacatga 20273

                                                                         
Query: 1078  atccagacggcatggttgctctgctggactaccgtgaggatggtgtgactccatatatga 1137
             || |||||||||||||||||||||||||||| ||||||||| | |||||||||| | |||
Sbjct: 20272 atgcagacggcatggttgctctgctggactagcgtgaggatcgcgtgactccatgtgtga 20213

                                                                         
Query: 1138  ttttctttaaggatggcttagaaatggaaaaatgttaacaaatttggctgttgggatcgg 1197
              ||||||||||||||||||||| |||| |||| ||||||||||||||||| |    ||||
Sbjct: 20212 ctttctttaaggatggcttagagatgg-aaaacgttaacaaatttggctgct-acttcgg 20155

                                                                         
Query: 1198  atctatcacccgttgtcataactggctggccactgctttccatccacaaa--acaccagg 1255
             |||||||||| || |||| ||||||||||||  |||||| ||| ||||||  ||||||||
Sbjct: 20154 atctatcacctgtcgtcaaaactggctggccgatgcttttcattcacaaaacacaccagg 20095

                                      
Query: 1256  acttagacaagtgggactgatggca 1280
             |||||||||| ||||||||||||||
Sbjct: 20094 acttagacaaatgggactgatggca 20070


>Sscrofa_Chr17 
||          Length = 69701581

 Score =  682 bits (344), Expect = 0.0
 Identities = 568/634 (89%), Gaps = 14/634 (2%)
 Strand = Plus / Minus

                                                                            
Query: 658      tgatcatctaccgggacctcatcagccatgatgagatgttttccgacatctacaagatcc 717
                |||||| ||||| ||||| ||||||||| ||||||||||| || ||||||||||||||||
Sbjct: 16529893 tgatcagctacccggaccgcatcagccacgatgagatgttctctgacatctacaagatcc 16529834

                                                                            
Query: 718      gggagatcgcggacgggctgtgtctggaggtggaggggaagatggtcagtaggacagagg 777
                ||||| | ||||||||| |||||||| |||||||||| |||||||||| ||||||||| |
Sbjct: 16529833 gggaggttgcggacggggtgtgtctgtaggtggagggaaagatggtcaataggacagaag 16529774

                                                                            
Query: 778      gtaacattgatgactcgctcattggtggaaatgcctccgctgaagggcccgagggcgaag 837
                |||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||
Sbjct: 16529773 gtaacattgatgactcgctcattggtggaaatgcctccgctgaagg-ccggagggcgaag 16529715

                                                                            
Query: 838      gtaccgaaagcacagtaatcactggtgtcgatattgtcatgaaccatcacctgcaggaaa 897
                 |||||    |||||||||| ||||||| |||||| ||| ||||||||  ||||||||||
Sbjct: 16529714 ataccg----cacagtaatcgctggtgtggatattatcaggaaccatcgtctgcaggaaa 16529659

                                                                            
Query: 898      ccagcttcacaaaggaagcctacaagaagtacatcaaagattatatgaagtcaatcaaag 957
                |  |||||||| ||    ||||||| ||||||||||||||||| ||||||||||||||||
Sbjct: 16529658 cg-gcttcacagag----cctacaaaaagtacatcaaagattacatgaagtcaatcaaag 16529604

                                                                            
Query: 958      ggaaactcgaagaacagagaccagaaagagtaaaaccttttatgacaggagctgcagaac 1017
                ||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16529603 ggaaacttgaaga-cagagaccagaaagagtaaaaccttttatgacaggagctgcagaac 16529545

                                                                            
Query: 1018     aaatcaagcacatccttgctaatttcaaaaactatcagttctttattggtgaaaacatga 1077
                | ||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||
Sbjct: 16529544 acatcaagcacatccttgctaatttcagaaactatcacttctttattggtgaaaacatga 16529485

                                                                            
Query: 1078     atccagacggcatggttgctctgctggactaccgtgaggatggtgtgactccatatatga 1137
                ||||||| | |||||||||||||||||||| ||||||||||||||||||||||||| |||
Sbjct: 16529484 atccagatgacatggttgctctgctggactgccgtgaggatggtgtgactccatatgtga 16529425

                                                                            
Query: 1138     ttttctttaaggatggcttagaaatggaaaaa-tgttaacaaatttggctgttgggatcg 1196
                |||||||||||||  ||||||||||||||||| ||||| || |||||||||||    |||
Sbjct: 16529424 ttttctttaaggacagcttagaaatggaaaaaatgtta-cacatttggctgtt-acttcg 16529367

                                                                            
Query: 1197     gatctatcacccgttgtcataactggctggccactgctttccatccacaaaacaccagga 1256
                ||||| ||||| ||  ||||||||||  ||||   ||||| ||||| |||||||||| ||
Sbjct: 16529366 gatctgtcacctgtcatcataactggagggcccacgcttttcatccgcaaaacaccaaga 16529307

                                                  
Query: 1257     cttagacaagtgggactgatggcatcttgagctc 1290
                ||||||||| ||||||||||||||||||||||||
Sbjct: 16529306 cttagacaaatgggactgatggcatcttgagctc 16529273



 Score =  327 bits (165), Expect = 1e-86
 Identities = 277/313 (88%), Gaps = 1/313 (0%)
 Strand = Plus / Minus

                                                                            
Query: 924      aagtacatcaaagattatatgaagtcaatcaaagggaaactcgaagaacagagaccagaa 983
                |||||||| ||||| || |||||||||||||||||| |||| ||| || |||||||||| 
Sbjct: 15622623 aagtacattaaagaatacatgaagtcaatcaaagggtaacttgaacaatagagaccagag 15622564

                                                                            
Query: 984      agagtaaaaccttttatgacaggagctgcagaacaaatcaagcacatccttgctaatttc 1043
                ||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||
Sbjct: 15622563 agagtaaaaccttttatgacatgagctacagaacaaatcaagcacatccttgctaatttc 15622504

                                                                            
Query: 1044     aaaaactatcagttctttattggtgaaaacatgaatccagacggcatggttgctctgctg 1103
                |||||||||||||||||||| ||||||||  |||||||||| ||| ||||||||||| ||
Sbjct: 15622503 aaaaactatcagttctttatcggtgaaaatctgaatccagatggcgtggttgctctgttg 15622444

                                                                            
Query: 1104     gactaccgtgaggatggtgtgactccatatatgattttctttaaggatggcttagaaatg 1163
                |||| |  |||||||| |||||| |||| | || ||||| ||||||||||||| | ||||
Sbjct: 15622443 gactgcactgaggatgatgtgaccccatgtgtggttttccttaaggatggctttgtaatg 15622384

                                                                            
Query: 1164     gaaaaatgttaacaaatttggctgttgggatcggatctatcacccgttgtcataactggc 1223
                |||||||| |||||||| ||||||||    | |||||||||||| |||||||||||||| 
Sbjct: 15622383 gaaaaatggtaacaaatgtggctgtt-attttggatctatcacctgttgtcataactgga 15622325

                             
Query: 1224     tggccactgcttt 1236
                |||||||||||||
Sbjct: 15622324 tggccactgcttt 15622312



 Score =  212 bits (107), Expect = 4e-52
 Identities = 269/325 (82%), Gaps = 21/325 (6%)
 Strand = Plus / Minus

                                                                            
Query: 613      tcctgctaagctagcgccgccgtcgtctccctccagccg--ccatcatgatcatctaccg 670
                |||||||||| ||| ||| | |||||||||||||||||   ||| |||||||||||||| 
Sbjct: 15623094 tcctgctaagttagtgcctcggtcgtctccctccagccctcccaccatgatcatctacca 15623035

                                                                            
Query: 671      ggacctcatcagccatgatgagatgttttccgacatctacaagatccgggagatcgcgga 730
                ||||||||||||||||| ||||||||| ||| | ||||||||||||| |||||||  |||
Sbjct: 15623034 ggacctcatcagccatggtgagatgttctccaatatctacaagatccaggagatcaggga 15622975

                                                                            
Query: 731      cgggctgtgtctggaggtggaggggaagatggtcagtaggacagagggtaacattgatga 790
                 | ||||      || ||||||||||||||||||||||||||||||||| ||| ||||||
Sbjct: 15622974 tgagctg------gaagtggaggggaagatggtcagtaggacagagggtgacactgatga 15622921

                                                                            
Query: 791      ctcgctcattggtggaaatgcctccgctgaagggcccgagggcgaaggtaccgaaagcac 850
                || |||||||||||||| || |             | || | | |||||||| ||| |||
Sbjct: 15622920 cttgctcattggtggaagtgtc-------------cagatgtcaaaggtaccaaaatcac 15622874

                                                                            
Query: 851      agtaatcactggtgtcgatattgtcatgaaccatcacctgcaggaaaccagcttcacaaa 910
                || ||||||||||||| ||||||||||||||||| || ||||||||||||||||||||||
Sbjct: 15622873 agcaatcactggtgtcaatattgtcatgaaccataacttgcaggaaaccagcttcacaaa 15622814

                                         
Query: 911      ggaagcctacaagaagtacatcaaa 935
                 |||||||||| ||| |||||||||
Sbjct: 15622813 agaagcctacaggaattacatcaaa 15622789



 Score = 67.9 bits (34), Expect = 1e-08
 Identities = 37/38 (97%)
 Strand = Plus / Minus

                                                      
Query: 1347     catgtcatgtaggttgtctaaaaataaaatgcatttaa 1384
                |||||||||||||||||||||||||||||||| |||||
Sbjct: 16529234 catgtcatgtaggttgtctaaaaataaaatgcgtttaa 16529197


>Sscrofa_Chr13 
||          Length = 218635234

 Score =  670 bits (338), Expect = 0.0
 Identities = 617/704 (87%), Gaps = 12/704 (1%)
 Strand = Plus / Plus

                                                                             
Query: 642       cctccagccgccatcatgatcatctaccgggacctcatcagccatgatgagatgttttcc 701
                 ||||||||| ||||||||||||||||| ||||||||||||||| |||||||||||| | |
Sbjct: 126330092 cctccagccaccatcatgatcatctactgggacctcatcagccgtgatgagatgttcttc 126330151

                                                                             
Query: 702       gacatctacaagatccgggagatcgcggacgggctgtgtctggaggtggaggggaagatg 761
                  ||||||| ||||||| ||||||  ||| | ||||||||||  ||||||| ||| | |||
Sbjct: 126330152 cacatctagaagatccaggagatt-cggtctggctgtgtctacaggtggaaggggacatg 126330210

                                                                             
Query: 762       gtcagtaggacagagggtaacattgatgactcgctcattggtggaaatgcctccgctgaa 821
                 |||||||||| ||||||||||||  |||||| |||||||||||||||||||||| |||||
Sbjct: 126330211 gtcagtaggatagagggtaacatc-atgacttgctcattggtggaaatgcctccactgaa 126330269

                                                                             
Query: 822       gggcccgagggcgaaggtaccgaaagcacagtaatcactggtgtcgatattgtcatgaac 881
                 | |||  |||||||||||||| |||||||||||||||||||||||  |||||||||||||
Sbjct: 126330270 gagccgaagggcgaaggtaccaaaagcacagtaatcactggtgtcactattgtcatgaac 126330329

                                                                             
Query: 882       catcacctgcaggaaaccagcttcacaaaggaagcctacaagaagtacatcaaagattat 941
                 |||||  |||||||||| | ||||||||| ||||||||||||||||| ||||||||||||
Sbjct: 126330330 catcatttgcaggaaacaaacttcacaaaagaagcctacaagaagtatatcaaagattat 126330389

                                                                             
Query: 942       atgaagtcaatcaaagggaaactcgaagaacagagaccagaaagagtaaaaccttttatg 1001
                 || ||||| |||||||||||||| ||| ||||||||||||| ||||||||||||||||||
Sbjct: 126330390 attaagtcgatcaaagggaaacttgaaaaacagagaccagagagagtaaaaccttttatg 126330449

                                                                             
Query: 1002      acaggagctgcagaacaaatcaagcacatccttgctaatttcaaaaactatcagttcttt 1061
                 ||||||||||||||| ||||||| ||||||||||||||||||||||||| ||||||| ||
Sbjct: 126330450 acaggagctgcagaataaatcaatcacatccttgctaatttcaaaaactttcagttcctt 126330509

                                                                             
Query: 1062      attggtgaaaacatgaatccagacggcatggttgctctgctggactaccgtgaggatggt 1121
                 ||||| ||||||||||||||||  ||||||||||||||||||||||||| ||||||||||
Sbjct: 126330510 attggggaaaacatgaatccagttggcatggttgctctgctggactaccatgaggatggt 126330569

                                                                             
Query: 1122      gtgac-tccatatatgattttctttaaggatggcttagaaatggaaaaatgttaacaaat 1180
                 |||||  |||||||||||||||||||||| ||||||||||||||||||| |||   ||||
Sbjct: 126330570 gtgacacccatatatgattttctttaagggtggcttagaaatggaaaaaagtt---aaat 126330626

                                                                             
Query: 1181      ttggctgttgggatcggatctatcacccgttgtcataactggctggccactgctttccat 1240
                 ||| | |||    || ||||| ||||| ||  ||| || ||||||||| ||||||| |||
Sbjct: 126330627 ttgtcagtt-acttcagatctgtcacctgtgatcacaagtggctggcccctgcttttcat 126330685

                                                                             
Query: 1241      ccacaaaacaccaggacttagacaagtgggactgatggcatcttgagctcgttattttga 1300
                 |||||||||||||||| |||||||| |||||||| ||||| |||||  || |||| ||||
Sbjct: 126330686 ccacaaaacaccaggatttagacaaatgggactggtggcaccttgatgtcattatcttga 126330745

                                                             
Query: 1301      cattgattttt-----ctttggagcggaggcattgtttttgagg 1339
                 ||  |||||||      |||||||| |||| |||||||||||||
Sbjct: 126330746 caacgatttttggttgttttggagcagaggaattgtttttgagg 126330789


>Sscrofa_Chr04 
||          Length = 143465943

 Score =  260 bits (131), Expect = 2e-66
 Identities = 226/253 (89%), Gaps = 6/253 (2%)
 Strand = Plus / Minus

                                                                             
Query: 942       atgaagtcaa-tcaaagggaaactcgaagaacagagaccagaaagag---taaaaccttt 997
                 |||||||||| |||||||||||||  | || |||||||||||||||    ||||||||||
Sbjct: 136320353 atgaagtcaagtcaaagggaaacttaaggagcagagaccagaaagatgattaaaaccttt 136320294

                                                                             
Query: 998       tatgacaggagctgcagaacaaatcaagcacatccttgctaatttcaaaaactatcagtt 1057
                 ||| ||||||| |||||||||||||||||||||||||||||||||||||| || ||||||
Sbjct: 136320293 tatcacaggagatgcagaacaaatcaagcacatccttgctaatttcaaaacctgtcagtt 136320234

                                                                             
Query: 1058      ctttattggtgaaaacatgaatccagacggcatggttgctctgctggactaccgtgagga 1117
                 ||| ||||||||||| ||||||||||| |||||||   |||||||||||| |  ||||||
Sbjct: 136320233 cttcattggtgaaaa-atgaatccagatggcatggccactctgctggactgctatgagga 136320175

                                                                             
Query: 1118      tggtgtgactccatatatgattttctttaaggatggcttagaaatgg-aaaaatgttaac 1176
                 |||||||||| ||||||||||||||||||||||||| |||||||||| ||||||| ||||
Sbjct: 136320174 tggtgtgactgcatatatgattttctttaaggatggtttagaaatggaaaaaatgctaac 136320115

                              
Query: 1177      aaatttggctgtt 1189
                 ||||||| |||||
Sbjct: 136320114 aaatttgcctgtt 136320102


>gb|JH118647.1| Sus scrofa unplaced genomic scaffold ChrUScaf1461
          Length = 245847

 Score =  252 bits (127), Expect = 5e-64
 Identities = 141/148 (95%)
 Strand = Plus / Minus

                                                                          
Query: 1241   ccacaaaacaccaggacttagacaagtgggactgatggcatcttgagctcgttattttga 1300
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 198265 ccacaaaacaccaggacttagacaagtgggactgatggcatcttgagctcgttattttga 198206

                                                                          
Query: 1301   cattgatttttctttggagcggaggcattgtttttgaggnnnnnnncatgtcatgtaggt 1360
              |||||||||||||||||||||||||||||||||||||||       ||||||||||||||
Sbjct: 198205 cattgatttttctttggagcggaggcattgtttttgaggaaaaaaacatgtcatgtaggt 198146

                                          
Query: 1361   tgtctaaaaataaaatgcatttaaactc 1388
              ||||||||||||||||||||||||||||
Sbjct: 198145 tgtctaaaaataaaatgcatttaaactc 198118



 Score =  210 bits (106), Expect = 2e-51
 Identities = 106/106 (100%)
 Strand = Plus / Minus

                                                                          
Query: 950    aatcaaagggaaactcgaagaacagagaccagaaagagtaaaaccttttatgacaggagc 1009
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 200183 aatcaaagggaaactcgaagaacagagaccagaaagagtaaaaccttttatgacaggagc 200124

                                                            
Query: 1010   tgcagaacaaatcaagcacatccttgctaatttcaaaaactatcag 1055
              ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 200123 tgcagaacaaatcaagcacatccttgctaatttcaaaaactatcag 200078



 Score =  155 bits (78), Expect = 8e-35
 Identities = 78/78 (100%)
 Strand = Plus / Minus

                                                                          
Query: 757    agatggtcagtaggacagagggtaacattgatgactcgctcattggtggaaatgcctccg 816
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 200776 agatggtcagtaggacagagggtaacattgatgactcgctcattggtggaaatgcctccg 200717

                                
Query: 817    ctgaagggcccgagggcg 834
              ||||||||||||||||||
Sbjct: 200716 ctgaagggcccgagggcg 200699


>Sscrofa_Chr02 
||          Length = 162569375

 Score =  119 bits (60), Expect = 4e-24
 Identities = 213/261 (81%), Gaps = 6/261 (2%)
 Strand = Plus / Plus

                                                                            
Query: 1034     tgctaatttcaaaaactatcagttctttattggtgaaaacatgaatccagacggcatggt 1093
                |||||||||||||||||||   ||||| | | ||||||||||||||||||   ||||| |
Sbjct: 88288572 tgctaatttcaaaaactatgcattcttcaatagtgaaaacatgaatccaggtagcatgct 88288631

                                                                            
Query: 1094     tgctctgctggactaccgtgaggatggtgtgactcc----atatatgattttctttaagg 1149
                |||||||||| ||  | |||| ||||||||||| ||    | | || ||||| |||||||
Sbjct: 88288632 tgctctgctgaaccgctgtgaagatggtgtgaccccccccacaaataatttt-tttaagg 88288690

                                                                            
Query: 1150     atggcttagaaatggaaaaatgttaacaaatttggctgttgggatcggatctatcacccg 1209
                |||| |||||||| ||||||||||| || ||||||||||     | |||||| ||| | |
Sbjct: 88288691 atggtttagaaatagaaaaatgttaccacatttggctgtcatttt-ggatctgtcatctg 88288749

                                                                            
Query: 1210     ttgtcataactggctggccactgctttccatccacaaaacaccaggacttagacaagtgg 1269
                ||  ||||| ||||||||  |||||||  ||||||| ||||||||||||||||||| |||
Sbjct: 88288750 tttccataattggctggctgctgctttttatccacacaacaccaggacttagacaaatgg 88288809

                                     
Query: 1270     gactgatggcatcttgagctc 1290
                 ||||||| ||||||||||||
Sbjct: 88288810 aactgatgtcatcttgagctc 88288830


  Database: Sscrofa_10.2.fasta
    Posted date:  Nov 16, 2011 10:34 AM
  Number of letters in database: 2,808,509,378
  Number of sequences in database:  4582
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4582
Number of Hits to DB: 36,714,184
Number of extensions: 481
Number of successful extensions: 481
Number of sequences better than 1.0e-05: 12
Number of HSP's gapped: 454
Number of HSP's successfully gapped: 55
Length of query: 1410
Length of database: 2,808,509,378
Length adjustment: 21
Effective length of query: 1389
Effective length of database: 2,808,413,156
Effective search space: 3900885873684
Effective search space used: 3900885873684
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 18 (36.2 bits)
S2: 30 (60.0 bits)