Search to RefSeqBP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AMP01_0068_C04
(2336 letters)
Database: RefSeq49_BP.fasta
33,088 sequences; 17,681,374 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001030215.1| beta-galactosidase precursor [Bos taurus]. 1083 0.0
Alignment gi|NP_001192931.1| beta-galactosidase-1-like protein [Bos tauru... 672 0.0
Alignment gi|XP_002685627.1| PREDICTED: galactosidase, beta 1-like [Bos t... 672 0.0
Alignment gi|XP_002693892.1| PREDICTED: galactosidase, beta 1-like [Bos t... 359 5e-99
Alignment gi|XP_597358.2| PREDICTED: galactosidase, beta 1-like [Bos taur... 359 5e-99
Alignment gi|XP_002693891.1| PREDICTED: galactosidase, beta 1-like [Bos t... 343 4e-94
Alignment gi|XP_600640.5| PREDICTED: galactosidase, beta 1-like [Bos taur... 343 4e-94
Alignment gi|XP_001254795.2| PREDICTED: galactosidase, beta 1-like [Bos t... 93 1e-18
>ref|NP_001030215.1| beta-galactosidase precursor [Bos taurus].
Length = 653
Score = 1083 bits (2800), Expect = 0.0
Identities = 517/651 (79%), Positives = 562/651 (86%), Gaps = 2/651 (0%)
Frame = +2
Query: 17 MPGVVHIXXXXXXXXXXXXXXXXKNAPLRTFKIDYNRNCFLKDGQPFRYISGSIHYFRMP 196
MPGVV + NA RTF+IDY RN FLKDGQPFRYISGSIHYFR+P
Sbjct: 1 MPGVVRLLALLLVPLLLGSARGLHNATQRTFQIDYRRNRFLKDGQPFRYISGSIHYFRVP 60
Query: 197 RFYWKDRLLKMKMAGLNAIETYVAWNFHEPWPGKYQFTGDHDVEYFIRLAHQLGLLVILR 376
RFYWKDRLLKMKMAGLNAI+TYVAWNFHE PG+Y F+GDHDVE+FI+LAH+LGLLVILR
Sbjct: 61 RFYWKDRLLKMKMAGLNAIQTYVAWNFHELQPGRYNFSGDHDVEHFIQLAHELGLLVILR 120
Query: 377 PGPYICAEWDMGGLPAWLLEKESIVLRSSHPDYLAAVDKWLGVLLPKMKPLLYQNGGPII 556
PGPYICAEWDMGGLPAWLLEK+SIVLRSS PDYLAAVDKWLGVLLPKM+PLLY+NGGPII
Sbjct: 121 PGPYICAEWDMGGLPAWLLEKKSIVLRSSDPDYLAAVDKWLGVLLPKMRPLLYKNGGPII 180
Query: 557 TVQVENEYGSYYSCDYNYLRFLQKRFHYYLGEDVVLFTTDGAHEKFLACGTLEGLYATVD 736
TVQVENEYGSY SCDY+YLRFLQKRFH +LGEDV+LFTTDG +E+ L CG L+GLYATVD
Sbjct: 181 TVQVENEYGSYLSCDYDYLRFLQKRFHDHLGEDVLLFTTDGVNERLLQCGALQGLYATVD 240
Query: 737 FGVDANITAAFLMQRKYEPRGPLINSEFYTGWLDHWGQPHSTVKTQVVASFLHDILALGA 916
F N+TAAF++QRK+EP GPL+NSEFYTGWLDHWGQ HSTV ++ VA LHD+LALGA
Sbjct: 241 FSPGTNLTAAFMLQRKFEPTGPLVNSEFYTGWLDHWGQRHSTVSSKAVAFTLHDMLALGA 300
Query: 917 NVNMYMFIGGTNFAYWNGANTPYQPQPTSYDYDAPLSEAGDLTEKYFALRDVIQKFKKVP 1096
NVNMYMFIGGTNFAYWNGAN PYQPQPTSYDYDAPLSEAGDLTEKYFALRD+IQKF KVP
Sbjct: 301 NVNMYMFIGGTNFAYWNGANIPYQPQPTSYDYDAPLSEAGDLTEKYFALRDIIQKFAKVP 360
Query: 1097 EGLIPPSTPKFAYGKVALKKLKTVVEALDILCPSGPIKSFYPLTFIQVKQYFGFVLYRTT 1276
EG IPPSTPKFAYGKVAL KLKTV +AL+ILCPSGPIKS YPLTFI VKQYFGFVLYRT
Sbjct: 361 EGPIPPSTPKFAYGKVALNKLKTVEDALNILCPSGPIKSVYPLTFIDVKQYFGFVLYRTM 420
Query: 1277 LPKDCKDPTHLSSPFNGVHDRAYVSVDGVPQGVLERNIVITLNITGKAGATLDLLVENMG 1456
LP+DC DPT LSSP +GVHDRAYVSV+GV QG+LER VITLNITGKAGATLDLLVENMG
Sbjct: 421 LPEDCSDPTPLSSPLSGVHDRAYVSVNGVAQGILERESVITLNITGKAGATLDLLVENMG 480
Query: 1457 RVNYGNSINDFKGLISNLTLGSSILTDWQIFPMDTEDAVRRYLGAWHGYGGKGHHEAHTH 1636
RVNYG+SINDFKGL+SNLTLGS ILT+W+IFP+D EDAVR +LG W G H++A H
Sbjct: 481 RVNYGSSINDFKGLVSNLTLGSKILTNWEIFPLDMEDAVRSHLGTWGGRDRGYHNKARAH 540
Query: 1637 SPSEYTLPAFYVANFSIPSEIPDLPQDTFIQFPGWTKGQVWINGFNLGRYWPARGPQKTL 1816
SP Y LP FYV NF+IPS I DLPQDTFIQFPGWTKGQVWINGFNLGRYWP RGPQ TL
Sbjct: 541 SPPTYALPTFYVGNFTIPSGIADLPQDTFIQFPGWTKGQVWINGFNLGRYWPVRGPQMTL 600
Query: 1817 FVPQHILVTSAPNTIIVLELEHAPCGDKEP--CTVEFVDKPLIGATETWSH 1963
FVPQHILVTS PNTI+VLELEHAPC D P CTVEFVDKP+ +T H
Sbjct: 601 FVPQHILVTSTPNTIVVLELEHAPCQDGGPELCTVEFVDKPVFRTVQTHRH 651
>ref|NP_001192931.1| beta-galactosidase-1-like protein [Bos taurus].
Length = 647
Score = 672 bits (1733), Expect = 0.0
Identities = 342/628 (54%), Positives = 434/628 (69%), Gaps = 3/628 (0%)
Frame = +2
Query: 92 APLRTFKIDYNRNCFLKDGQPFRYISGSIHYFRMPRFYWKDRLLKMKMAGLNAIETYVAW 271
A R+F +D + N FL DG PFRY+SGS+HYFR+PR W DRLLKM+M+GLN ++ YV W
Sbjct: 24 ADARSFVVDRDHNRFLLDGAPFRYVSGSLHYFRVPRVLWADRLLKMRMSGLNVVQFYVPW 83
Query: 272 NFHEPWPGKYQFTGDHDVEYFIRLAHQLGLLVILRPGPYICAEWDMGGLPAWLLEKESIV 451
N+HEP PG Y F G D+ F++ A LLVILRPGPYICAEW+MGGLPAWLL K I
Sbjct: 84 NYHEPEPGVYNFNGSRDLFAFLKEATLANLLVILRPGPYICAEWEMGGLPAWLLRKPKIH 143
Query: 452 LRSSHPDYLAAVDKWLGVLLPKMKPLLYQNGGPIITVQVENEYGSYYSCDYNYLRFLQKR 631
LR+S PD+LAAVD W VLLP++ P LY NGG II++QVENEYGSY +CD +Y+R L
Sbjct: 144 LRTSDPDFLAAVDSWFKVLLPRIYPWLYHNGGNIISIQVENEYGSYRACDVSYMRHLAGL 203
Query: 632 FHYYLGEDVVLFTTDGAHEKFLACGTLEGLYATVDFGVDANITAAFLMQRKYEPRGPLIN 811
F LG+ ++LFTTDG + L CG+L+GLY TVDFG N+T F + RKYEPRGPL+N
Sbjct: 204 FRALLGDRILLFTTDG--PEGLKCGSLQGLYTTVDFGPADNMTKIFGLLRKYEPRGPLVN 261
Query: 812 SEFYTGWLDHWGQPHSTVKTQVVASFLHDILALGANVNMYMFIGGTNFAYWNGANTP--Y 985
SE+YTGWLD+WGQ HST V L +L LGA+VNMYMF GGTNF YWNGA+ +
Sbjct: 262 SEYYTGWLDYWGQNHSTRSIPAVTKGLEKMLKLGASVNMYMFHGGTNFGYWNGADEKGRF 321
Query: 986 QPQPTSYDYDAPLSEAGDLTEKYFALRDVIQKFKKVPEGLIPPSTPKFAYGKVALKKLKT 1165
P TSYDYDAP+SEAGD T K FA+R+VI KF++VP G +PP +PK G + L
Sbjct: 322 LPITTSYDYDAPISEAGDPTPKLFAIRNVISKFQEVPLGPLPPPSPKMTLGPLNLHLDGN 381
Query: 1166 VVEALDILCPSGPIKSFYPLTFIQVKQYFGFVLYRTTLPKDCKDPTHLSSPFNGVHDRAY 1345
+++ LD LCP GPI S P+TF V Q G++LYRT LP +PT L P NGVHDRAY
Sbjct: 382 LLDFLDFLCPQGPIHSVLPMTFEAVNQVHGYMLYRTYLPHTVSEPTQLWVPNNGVHDRAY 441
Query: 1346 VSVDGVPQGVLERNIVITLNITGKAGATLDLLVENMGRVNYGNSINDFKGLISNLTLGSS 1525
V VDGV QGVLERN+ L + GK GATLD+L+ENMGR+++G++ +DFKGL+ LG +
Sbjct: 442 VMVDGVFQGVLERNMKHNLFLMGKIGATLDVLLENMGRLSFGSNSSDFKGLLQPPILGQT 501
Query: 1526 ILTDWQIFPMDTEDAVRRYLGAWHGYGGKGHHEAHTHSPSEYTLPAFYVANFSIPSEIPD 1705
ILT W +FP+ ++ V+ W H +H +PS P FY F I +
Sbjct: 502 ILTQWLMFPLKVDNLVK----GWFPIQPLKH--SHPQTPSG---PTFYSTTFPILNS--- 549
Query: 1706 LPQDTFIQFPGWTKGQVWINGFNLGRYWPARGPQKTLFVPQHILV-TSAPNTIIVLELEH 1882
DTF+ PGWTKGQVWINGFNLGRYW RGPQ+TL+VP+ +L A N I +LELE+
Sbjct: 550 -GGDTFLFLPGWTKGQVWINGFNLGRYWTKRGPQQTLYVPRPLLFPRGAHNRITLLELEN 608
Query: 1883 APCGDKEPCTVEFVDKPLIGATETWSHV 1966
P +P ++F+D+P++ +T+ ++V
Sbjct: 609 VP---PQP-QIQFLDRPILNSTKHRTYV 632
>ref|XP_002685627.1| PREDICTED: galactosidase, beta 1-like [Bos taurus].
Length = 647
Score = 672 bits (1733), Expect = 0.0
Identities = 342/628 (54%), Positives = 434/628 (69%), Gaps = 3/628 (0%)
Frame = +2
Query: 92 APLRTFKIDYNRNCFLKDGQPFRYISGSIHYFRMPRFYWKDRLLKMKMAGLNAIETYVAW 271
A R+F +D + N FL DG PFRY+SGS+HYFR+PR W DRLLKM+M+GLN ++ YV W
Sbjct: 24 ADARSFVVDRDHNRFLLDGAPFRYVSGSLHYFRVPRVLWADRLLKMRMSGLNVVQFYVPW 83
Query: 272 NFHEPWPGKYQFTGDHDVEYFIRLAHQLGLLVILRPGPYICAEWDMGGLPAWLLEKESIV 451
N+HEP PG Y F G D+ F++ A LLVILRPGPYICAEW+MGGLPAWLL K I
Sbjct: 84 NYHEPEPGVYNFNGSRDLFAFLKEATLANLLVILRPGPYICAEWEMGGLPAWLLRKPKIH 143
Query: 452 LRSSHPDYLAAVDKWLGVLLPKMKPLLYQNGGPIITVQVENEYGSYYSCDYNYLRFLQKR 631
LR+S PD+LAAVD W VLLP++ P LY NGG II++QVENEYGSY +CD +Y+R L
Sbjct: 144 LRTSDPDFLAAVDSWFKVLLPRIYPWLYHNGGNIISIQVENEYGSYRACDVSYMRHLAGL 203
Query: 632 FHYYLGEDVVLFTTDGAHEKFLACGTLEGLYATVDFGVDANITAAFLMQRKYEPRGPLIN 811
F LG+ ++LFTTDG + L CG+L+GLY TVDFG N+T F + RKYEPRGPL+N
Sbjct: 204 FRALLGDRILLFTTDG--PEGLKCGSLQGLYTTVDFGPADNMTKIFGLLRKYEPRGPLVN 261
Query: 812 SEFYTGWLDHWGQPHSTVKTQVVASFLHDILALGANVNMYMFIGGTNFAYWNGANTP--Y 985
SE+YTGWLD+WGQ HST V L +L LGA+VNMYMF GGTNF YWNGA+ +
Sbjct: 262 SEYYTGWLDYWGQNHSTRSIPAVTKGLEKMLKLGASVNMYMFHGGTNFGYWNGADEKGRF 321
Query: 986 QPQPTSYDYDAPLSEAGDLTEKYFALRDVIQKFKKVPEGLIPPSTPKFAYGKVALKKLKT 1165
P TSYDYDAP+SEAGD T K FA+R+VI KF++VP G +PP +PK G + L
Sbjct: 322 LPITTSYDYDAPISEAGDPTPKLFAIRNVISKFQEVPLGPLPPPSPKMTLGPLNLHLDGN 381
Query: 1166 VVEALDILCPSGPIKSFYPLTFIQVKQYFGFVLYRTTLPKDCKDPTHLSSPFNGVHDRAY 1345
+++ LD LCP GPI S P+TF V Q G++LYRT LP +PT L P NGVHDRAY
Sbjct: 382 LLDFLDFLCPQGPIHSVLPMTFEAVNQVHGYMLYRTYLPHTVSEPTQLWVPNNGVHDRAY 441
Query: 1346 VSVDGVPQGVLERNIVITLNITGKAGATLDLLVENMGRVNYGNSINDFKGLISNLTLGSS 1525
V VDGV QGVLERN+ L + GK GATLD+L+ENMGR+++G++ +DFKGL+ LG +
Sbjct: 442 VMVDGVFQGVLERNMKHNLFLMGKIGATLDVLLENMGRLSFGSNSSDFKGLLQPPILGQT 501
Query: 1526 ILTDWQIFPMDTEDAVRRYLGAWHGYGGKGHHEAHTHSPSEYTLPAFYVANFSIPSEIPD 1705
ILT W +FP+ ++ V+ W H +H +PS P FY F I +
Sbjct: 502 ILTQWLMFPLKVDNLVK----GWFPIQPLKH--SHPQTPSG---PTFYSTTFPILNS--- 549
Query: 1706 LPQDTFIQFPGWTKGQVWINGFNLGRYWPARGPQKTLFVPQHILV-TSAPNTIIVLELEH 1882
DTF+ PGWTKGQVWINGFNLGRYW RGPQ+TL+VP+ +L A N I +LELE+
Sbjct: 550 -GGDTFLFLPGWTKGQVWINGFNLGRYWTKRGPQQTLYVPRPLLFPRGAHNRITLLELEN 608
Query: 1883 APCGDKEPCTVEFVDKPLIGATETWSHV 1966
P +P ++F+D+P++ +T+ ++V
Sbjct: 609 VP---PQP-QIQFLDRPILNSTKHRTYV 632
>ref|XP_002693892.1| PREDICTED: galactosidase, beta 1-like [Bos taurus].
Length = 758
Score = 359 bits (922), Expect = 5e-99
Identities = 233/615 (37%), Positives = 336/615 (54%), Gaps = 9/615 (1%)
Frame = +2
Query: 134 FLKDGQPFRYISGSIHYFRMPRFYWKDRLLKMKMAGLNAIETYVAWNFHEPWPGKYQFTG 313
F + F GS+HYFR+PR YW+DRLLK++ GLN + TYV WN HEP G + F+G
Sbjct: 176 FKLENSAFWIFGGSVHYFRVPRAYWRDRLLKLRACGLNTLTTYVPWNLHEPERGTFDFSG 235
Query: 314 DHDVEYFIRLAHQLGLLVILRPGPYICAEWDMGGLPAWLLEKESIVLRSSHPDYLAAVDK 493
+ D+E FI LA ++GL VILRPGPYIC+E D+GGLP+WLL + LR+++ + AVD
Sbjct: 236 NLDLEAFILLAAEVGLWVILRPGPYICSEVDLGGLPSWLLRDPDMRLRTTYKGFTEAVDL 295
Query: 494 WLGVLLPKMKPLLYQNGGPIITVQVENEYGSYYSCDYNYLRFLQKRFHYYLGEDVVLFTT 673
+ L+ ++ PL Y++GGPII VQVENEYGS Y+ D Y+ +++K G +L T+
Sbjct: 296 YFDHLMLRVVPLQYKHGGPIIAVQVENEYGS-YNKDPAYMPYIKKALQ-DRGIAELLLTS 353
Query: 674 DGAHEKFLACGTLEGLYATVDFGVDANITAAFLMQRKYEPRGPLINSEFYTGWLDHWGQP 853
D ++ L G L+G+ AT++ + + + + P + E++TGW D WG P
Sbjct: 354 D--NQGGLKSGVLDGVLATINLQSQSELQLFTTILLGAQGSQPKMVMEYWTGWFDSWGGP 411
Query: 854 HSTVKTQVVASFLHDILALGANVNMYMFIGGTNFAYWNGAN--TPYQPQPTSYDYDAPLS 1027
H + + V + + I+ G+++N+YMF GGTNF + GA Y+P TSYDYDA L+
Sbjct: 412 HYILDSSEVLNTVSAIVKAGSSINLYMFHGGTNFGFIGGAMHFQDYKPDVTSYDYDAVLT 471
Query: 1028 EAGDLTEKYFALRDVIQKFKKVPEGLIPPSTPKFAYGKVALKKLKTVVEALDILCPSGPI 1207
EAGD T KY LR+ P + P PK AY V ++ +AL+ L P+
Sbjct: 472 EAGDYTAKYTKLREFFGSMAGAPLPVPPDLLPKTAYDPVTPAFYVSLWDALNFL--ELPV 529
Query: 1208 KSFYPLTFIQVK------QYFGFVLYRTTLPKDCKDPTHLSSPFNGVHDRAYVSVDGVPQ 1369
S +P+ + Q FG+ LY TT+ T V DR V ++
Sbjct: 530 TSEHPVNMENLPINGGSGQSFGYTLYETTI-------TASGVLTALVRDRGQVFLNTFFL 582
Query: 1370 GVLERNIVITLNITGKAGATLDLLVENMGRVNYGNSIN-DFKGLISNLTLGSSILTDWQI 1546
G L+ + T + TL +LVEN GRVNYG++I+ KG+I N+ L S L ++I
Sbjct: 583 GTLDYKKKTIVIPTVQGFTTLRILVENCGRVNYGDNIDQQRKGIIGNVYLNDSPLKKFKI 642
Query: 1547 FPMDTEDAVRRYLGAWHGYGGKGHHEAHTHSPSEYTLPAFYVANFSIPSEIPDLPQDTFI 1726
+ ++ + R +L + K E E PAF++ S + D P DTF+
Sbjct: 643 YSLEMD---RSFLQRFTADKWKPLTE-------EPMFPAFFLGALS----VLDSPYDTFV 688
Query: 1727 QFPGWTKGQVWINGFNLGRYWPARGPQKTLFVPQHILVTSAPNTIIVLELEHAPCGDKEP 1906
+ GW KG V+IN NLGRYW GPQ+TL++P L N IIV E + A
Sbjct: 689 KLEGWEKGVVFINNQNLGRYWNI-GPQETLYLPGAWLDVGL-NKIIVFEEKMA------Q 740
Query: 1907 CTVEFVDKPLIGATE 1951
++FVD P +G E
Sbjct: 741 RIIQFVDTPNLGQHE 755
>ref|XP_597358.2| PREDICTED: galactosidase, beta 1-like [Bos taurus].
Length = 758
Score = 359 bits (922), Expect = 5e-99
Identities = 233/615 (37%), Positives = 336/615 (54%), Gaps = 9/615 (1%)
Frame = +2
Query: 134 FLKDGQPFRYISGSIHYFRMPRFYWKDRLLKMKMAGLNAIETYVAWNFHEPWPGKYQFTG 313
F + F GS+HYFR+PR YW+DRLLK++ GLN + TYV WN HEP G + F+G
Sbjct: 176 FKLENSAFWIFGGSVHYFRVPRAYWRDRLLKLRACGLNTLTTYVPWNLHEPERGTFDFSG 235
Query: 314 DHDVEYFIRLAHQLGLLVILRPGPYICAEWDMGGLPAWLLEKESIVLRSSHPDYLAAVDK 493
+ D+E FI LA ++GL VILRPGPYIC+E D+GGLP+WLL + LR+++ + AVD
Sbjct: 236 NLDLEAFILLAAEVGLWVILRPGPYICSEVDLGGLPSWLLRDPDMRLRTTYKGFTEAVDL 295
Query: 494 WLGVLLPKMKPLLYQNGGPIITVQVENEYGSYYSCDYNYLRFLQKRFHYYLGEDVVLFTT 673
+ L+ ++ PL Y++GGPII VQVENEYGS Y+ D Y+ +++K G +L T+
Sbjct: 296 YFDHLMLRVVPLQYKHGGPIIAVQVENEYGS-YNKDPAYMPYIKKALQ-DRGIAELLLTS 353
Query: 674 DGAHEKFLACGTLEGLYATVDFGVDANITAAFLMQRKYEPRGPLINSEFYTGWLDHWGQP 853
D ++ L G L+G+ AT++ + + + + P + E++TGW D WG P
Sbjct: 354 D--NQGGLKSGVLDGVLATINLQSQSELQLFTTILLGAQGSQPKMVMEYWTGWFDSWGGP 411
Query: 854 HSTVKTQVVASFLHDILALGANVNMYMFIGGTNFAYWNGAN--TPYQPQPTSYDYDAPLS 1027
H + + V + + I+ G+++N+YMF GGTNF + GA Y+P TSYDYDA L+
Sbjct: 412 HYILDSSEVLNTVSAIVKAGSSINLYMFHGGTNFGFIGGAMHFQDYKPDVTSYDYDAVLT 471
Query: 1028 EAGDLTEKYFALRDVIQKFKKVPEGLIPPSTPKFAYGKVALKKLKTVVEALDILCPSGPI 1207
EAGD T KY LR+ P + P PK AY V ++ +AL+ L P+
Sbjct: 472 EAGDYTAKYTKLREFFGSMAGAPLPVPPDLLPKTAYDPVTPAFYVSLWDALNFL--ELPV 529
Query: 1208 KSFYPLTFIQVK------QYFGFVLYRTTLPKDCKDPTHLSSPFNGVHDRAYVSVDGVPQ 1369
S +P+ + Q FG+ LY TT+ T V DR V ++
Sbjct: 530 TSEHPVNMENLPINGGSGQSFGYTLYETTI-------TASGVLTALVRDRGQVFLNTFFL 582
Query: 1370 GVLERNIVITLNITGKAGATLDLLVENMGRVNYGNSIN-DFKGLISNLTLGSSILTDWQI 1546
G L+ + T + TL +LVEN GRVNYG++I+ KG+I N+ L S L ++I
Sbjct: 583 GTLDYKKKTIVIPTVQGFTTLRILVENCGRVNYGDNIDQQRKGIIGNVYLNDSPLKKFKI 642
Query: 1547 FPMDTEDAVRRYLGAWHGYGGKGHHEAHTHSPSEYTLPAFYVANFSIPSEIPDLPQDTFI 1726
+ ++ + R +L + K E E PAF++ S + D P DTF+
Sbjct: 643 YSLEMD---RSFLQRFTADKWKPLTE-------EPMFPAFFLGALS----VLDSPYDTFV 688
Query: 1727 QFPGWTKGQVWINGFNLGRYWPARGPQKTLFVPQHILVTSAPNTIIVLELEHAPCGDKEP 1906
+ GW KG V+IN NLGRYW GPQ+TL++P L N IIV E + A
Sbjct: 689 KLEGWEKGVVFINNQNLGRYWNI-GPQETLYLPGAWLDVGL-NKIIVFEEKMA------Q 740
Query: 1907 CTVEFVDKPLIGATE 1951
++FVD P +G E
Sbjct: 741 RIIQFVDTPNLGQHE 755
>ref|XP_002693891.1| PREDICTED: galactosidase, beta 1-like [Bos taurus].
Length = 899
Score = 343 bits (880), Expect = 4e-94
Identities = 225/602 (37%), Positives = 322/602 (53%), Gaps = 15/602 (2%)
Frame = +2
Query: 134 FLKDGQPFRYISGSIHYFRMPRFYWKDRLLKMKMAGLNAIETYVAWNFHEPWPGKYQFTG 313
F +G F + GS+HYFR+PR W+DRLLK++ G N + TYV WN HEP G + F+G
Sbjct: 321 FTLEGHEFLILGGSVHYFRVPRASWRDRLLKLRACGFNTVTTYVPWNLHEPERGTFDFSG 380
Query: 314 DHDVEYFIRLAHQLGLLVILRPGPYICAEWDMGGLPAWLLEKESIVLRSSHPDYLAAVDK 493
+ D+E FI LA ++GL VILRPGPYIC+E D+GGLP+WLL+ + LR+++ ++ AV+K
Sbjct: 381 NLDLEAFILLAEEVGLWVILRPGPYICSEMDLGGLPSWLLQDPTSQLRTTNRSFVNAVNK 440
Query: 494 WLGVLLPKMKPLLYQNGGPIITVQVENEYGSYYSCDYNYLRFLQKRFHYYLGEDVVLFTT 673
+ L+P++ L Y GGPII VQVENEYG +Y D Y+ +L + G +L T
Sbjct: 441 YFDHLIPRVALLQYLQGGPIIAVQVENEYGFFYK-DEAYMPYLLQALQ-QRGIGGLLLTA 498
Query: 674 DGAHEKFLACGTLEGLYATVD---FGVDANITAAFLMQRKYEPRGPLINSEFYTGWLDHW 844
D E + G ++G+ A+++ F VD +F K + P++ EF+ GW D W
Sbjct: 499 DSTEE--VMRGHIKGVLASINMKGFKVD-----SFKHLYKLQRHKPILIMEFWVGWFDTW 551
Query: 845 GQPHSTVKTQVVASFLHDILALGANVNMYMFIGGTNFAYWNGANT--PYQPQPTSYDYDA 1018
G H + V + + + G + N+YMF GGTNF + NGA + ++ TSYDYDA
Sbjct: 552 GIDHRVMGVNEVEKSVSEFIRYGISFNVYMFHGGTNFGFMNGATSFEKHRGVTTSYDYDA 611
Query: 1019 PLSEAGDLTEKYFALRDVIQKFKKVPEGLIPPSTPKFAYGKVALKKLKTVVEALDILCPS 1198
L+EAGD T KYF LR + + P +P TPK Y + L + EAL L
Sbjct: 612 VLTEAGDYTAKYFMLRSLFESILVRPLPPVPSPTPKAVYPSLKLSHYLPLWEALPYL--Q 669
Query: 1199 GPIKSFYPLTFIQVK------QYFGFVLYRTTLPKDCKDPTHLSSPFNGVHDRAYVSVDG 1360
P+ S P+ + Q FGFVLY T+ + H ++ D A V ++
Sbjct: 670 RPVTSNVPINMENLPINNGNGQSFGFVLYEMTICSGGR--LHANA-----QDEAQVFLNE 722
Query: 1361 VPQGVLERNIVITLNITGKAGA-TLDLLVENMGRVNYGNSI-NDFKGLISNLTLGSSILT 1534
G+L ++ ++I L +LVEN GRVN+ I N KGLI +TL L
Sbjct: 723 TSLGIL-TDVYRDIDIPPITECQLLRILVENQGRVNFSWKIQNQRKGLIGPVTLDKIPLN 781
Query: 1535 DWQIFPMDTEDAVRRYL--GAWHGYGGKGHHEAHTHSPSEYTLPAFYVANFSIPSEIPDL 1708
+ I+ ++ + + L W GG PS + PAF++ S
Sbjct: 782 WFTIYSLELKTQFFKKLRSARWRPLGG----------PS--SSPAFHLGTLMADSS---- 825
Query: 1709 PQDTFIQFPGWTKGQVWINGFNLGRYWPARGPQKTLFVPQHILVTSAPNTIIVLELEHAP 1888
PQDTF+Q GW +G V+ING NLGRYW GPQ+ L++P L N I++ E E +
Sbjct: 826 PQDTFLQLLGWNRGCVFINGRNLGRYWNI-GPQEALYLPGSWL-QPGTNEIVLFEKEKSG 883
Query: 1889 CG 1894
G
Sbjct: 884 SG 885
>ref|XP_600640.5| PREDICTED: galactosidase, beta 1-like [Bos taurus].
Length = 899
Score = 343 bits (880), Expect = 4e-94
Identities = 225/602 (37%), Positives = 322/602 (53%), Gaps = 15/602 (2%)
Frame = +2
Query: 134 FLKDGQPFRYISGSIHYFRMPRFYWKDRLLKMKMAGLNAIETYVAWNFHEPWPGKYQFTG 313
F +G F + GS+HYFR+PR W+DRLLK++ G N + TYV WN HEP G + F+G
Sbjct: 321 FTLEGHEFLILGGSVHYFRVPRASWRDRLLKLRACGFNTVTTYVPWNLHEPERGTFDFSG 380
Query: 314 DHDVEYFIRLAHQLGLLVILRPGPYICAEWDMGGLPAWLLEKESIVLRSSHPDYLAAVDK 493
+ D+E FI LA ++GL VILRPGPYIC+E D+GGLP+WLL+ + LR+++ ++ AV+K
Sbjct: 381 NLDLEAFILLAEEVGLWVILRPGPYICSEMDLGGLPSWLLQDPTSQLRTTNRSFVNAVNK 440
Query: 494 WLGVLLPKMKPLLYQNGGPIITVQVENEYGSYYSCDYNYLRFLQKRFHYYLGEDVVLFTT 673
+ L+P++ L Y GGPII VQVENEYG +Y D Y+ +L + G +L T
Sbjct: 441 YFDHLIPRVALLQYLQGGPIIAVQVENEYGFFYK-DEAYMPYLLQALQ-QRGIGGLLLTA 498
Query: 674 DGAHEKFLACGTLEGLYATVD---FGVDANITAAFLMQRKYEPRGPLINSEFYTGWLDHW 844
D E + G ++G+ A+++ F VD +F K + P++ EF+ GW D W
Sbjct: 499 DSTEE--VMRGHIKGVLASINMKGFKVD-----SFKHLYKLQRHKPILIMEFWVGWFDTW 551
Query: 845 GQPHSTVKTQVVASFLHDILALGANVNMYMFIGGTNFAYWNGANT--PYQPQPTSYDYDA 1018
G H + V + + + G + N+YMF GGTNF + NGA + ++ TSYDYDA
Sbjct: 552 GIDHRVMGVNEVEKSVSEFIRYGISFNVYMFHGGTNFGFMNGATSFEKHRGVTTSYDYDA 611
Query: 1019 PLSEAGDLTEKYFALRDVIQKFKKVPEGLIPPSTPKFAYGKVALKKLKTVVEALDILCPS 1198
L+EAGD T KYF LR + + P +P TPK Y + L + EAL L
Sbjct: 612 VLTEAGDYTAKYFMLRSLFESILVRPLPPVPSPTPKAVYPSLKLSHYLPLWEALPYL--Q 669
Query: 1199 GPIKSFYPLTFIQVK------QYFGFVLYRTTLPKDCKDPTHLSSPFNGVHDRAYVSVDG 1360
P+ S P+ + Q FGFVLY T+ + H ++ D A V ++
Sbjct: 670 RPVTSNVPINMENLPINNGNGQSFGFVLYEMTICSGGR--LHANA-----QDEAQVFLNE 722
Query: 1361 VPQGVLERNIVITLNITGKAGA-TLDLLVENMGRVNYGNSI-NDFKGLISNLTLGSSILT 1534
G+L ++ ++I L +LVEN GRVN+ I N KGLI +TL L
Sbjct: 723 TSLGIL-TDVYRDIDIPPITECQLLRILVENQGRVNFSWKIQNQRKGLIGPVTLDKIPLN 781
Query: 1535 DWQIFPMDTEDAVRRYL--GAWHGYGGKGHHEAHTHSPSEYTLPAFYVANFSIPSEIPDL 1708
+ I+ ++ + + L W GG PS + PAF++ S
Sbjct: 782 WFTIYSLELKTQFFKKLRSARWRPLGG----------PS--SSPAFHLGTLMADSS---- 825
Query: 1709 PQDTFIQFPGWTKGQVWINGFNLGRYWPARGPQKTLFVPQHILVTSAPNTIIVLELEHAP 1888
PQDTF+Q GW +G V+ING NLGRYW GPQ+ L++P L N I++ E E +
Sbjct: 826 PQDTFLQLLGWNRGCVFINGRNLGRYWNI-GPQEALYLPGSWL-QPGTNEIVLFEKEKSG 883
Query: 1889 CG 1894
G
Sbjct: 884 SG 885
>ref|XP_001254795.2| PREDICTED: galactosidase, beta 1-like [Bos taurus].
Length = 393
Score = 92.8 bits (229), Expect = 1e-18
Identities = 95/306 (31%), Positives = 140/306 (45%), Gaps = 11/306 (3%)
Frame = +2
Query: 989 PQPTSYDYDAPLSEAGDLTEKYFALRDVIQKFKKVPEGLIPPSTPKFAYGKVALKKLKTV 1168
P DY A L+E G T +Y V Q+F + G + T+
Sbjct: 115 PAARLIDYGALLTEDGGYTPEYL----VFQEFFRPDAGHF-------------ISLWDTL 157
Query: 1169 VEALDILCPSGPIKSFYPLTFIQVK------QYFGFVLYRTTLPKDCKDPTHLSSPFNGV 1330
+ D P++S PL+ Q+ Q G++LY T + + + + V
Sbjct: 158 IHQDD-----EPVRSTGPLSMEQLSVNEGSGQSAGYILYETVITRG-----GILNSDGHV 207
Query: 1331 HDRAYVSVDGVPQGVLE-RNIVITLNITG-KAGATLDLLVENMGRVNYGNSIN-DFKGLI 1501
DR V +D GVL+ + +TL K TL +LVEN GR+ G S+N + KGL
Sbjct: 208 KDRGQVFLDDKYIGVLDDTHQKLTLPSDHYKEFLTLRILVENQGRLASGTSMNQERKGLT 267
Query: 1502 SNLTLGSSILTDWQIFPMDTEDAV--RRYLGAWHGYGGKGHHEAHTHSPSEYTLPAFYVA 1675
N+ L S L ++I+ ++ ++ R+ W + H+ PAF++A
Sbjct: 268 GNIYLNGSPLRKFKIYSLEMQNKFIQRKLPNIWK--------PSFLHTVG----PAFFLA 315
Query: 1676 NFSIPSEIPDLPQDTFIQFPGWTKGQVWINGFNLGRYWPARGPQKTLFVPQHILVTSAPN 1855
+ S+ P+DTF+ GWTKG V+ING NLGRYW GPQ+TL+VP L N
Sbjct: 316 LLRVGSQ----PKDTFMSLQGWTKGVVFINGQNLGRYWNV-GPQETLYVPGPWLKPGL-N 369
Query: 1856 TIIVLE 1873
IIV E
Sbjct: 370 EIIVFE 375
Database: RefSeq49_BP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 17,681,374
Number of sequences in database: 33,088
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33088
Number of Hits to DB: 99,693,478
Number of extensions: 2986336
Number of successful extensions: 9261
Number of sequences better than 1.0e-05: 8
Number of HSP's gapped: 9213
Number of HSP's successfully gapped: 8
Length of query: 778
Length of database: 17,681,374
Length adjustment: 110
Effective length of query: 668
Effective length of database: 14,041,694
Effective search space: 9379851592
Effective search space used: 9379851592
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to RefSeqCP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AMP01_0068_C04
(2336 letters)
Database: RefSeq49_CP.fasta
33,336 sequences; 18,874,504 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001032730.1| beta-galactosidase precursor [Canis lupus fa... 1105 0.0
Alignment gi|XP_851411.1| PREDICTED: similar to galactosidase, beta 1-lik... 664 0.0
Alignment gi|XP_855681.1| PREDICTED: similar to CG3132-PA isoform 2 [Cani... 373 e-103
Alignment gi|XP_848226.1| PREDICTED: similar to CG3132-PA isoform 1 [Cani... 370 e-102
Alignment gi|XP_855708.1| PREDICTED: similar to CG3132-PA isoform 3 [Cani... 369 e-102
Alignment gi|XP_546385.2| PREDICTED: similar to T19B10.3 [Canis familiari... 343 4e-94
Alignment gi|XP_849131.1| PREDICTED: similar to beta-galactosidase-like p... 300 3e-81
Alignment gi|XP_536076.2| PREDICTED: similar to galactosidase, beta 1-lik... 231 2e-60
Alignment gi|XP_863702.1| PREDICTED: similar to galactosidase, beta 1-lik... 198 2e-50
>ref|NP_001032730.1| beta-galactosidase precursor [Canis lupus familiaris].
Length = 668
Score = 1105 bits (2858), Expect = 0.0
Identities = 524/632 (82%), Positives = 569/632 (90%), Gaps = 2/632 (0%)
Frame = +2
Query: 86 KNAPLRTFKIDYNRNCFLKDGQPFRYISGSIHYFRMPRFYWKDRLLKMKMAGLNAIETYV 265
+NA RTF IDY+ N FLKDGQPFRYISGSIHY R+PRFYWKDRLLKMKMAGLNAI+TYV
Sbjct: 26 RNASQRTFTIDYSHNRFLKDGQPFRYISGSIHYSRVPRFYWKDRLLKMKMAGLNAIQTYV 85
Query: 266 AWNFHEPWPGKYQFTGDHDVEYFIRLAHQLGLLVILRPGPYICAEWDMGGLPAWLLEKES 445
WNFHEP PG+YQF+G+ DVEYFI+LAH+LGLLVILRPGPYICAEWDMGGLPAWLL KES
Sbjct: 86 PWNFHEPQPGQYQFSGEQDVEYFIKLAHELGLLVILRPGPYICAEWDMGGLPAWLLLKES 145
Query: 446 IVLRSSHPDYLAAVDKWLGVLLPKMKPLLYQNGGPIITVQVENEYGSYYSCDYNYLRFLQ 625
I+LRSS PDYLAAVDKWLGVLLPKMKPLLYQNGGPIIT+QVENEYGSY++CDY+YLRFLQ
Sbjct: 146 IILRSSDPDYLAAVDKWLGVLLPKMKPLLYQNGGPIITMQVENEYGSYFTCDYDYLRFLQ 205
Query: 626 KRFHYYLGEDVVLFTTDGAHEKFLACGTLEGLYATVDFGVDANITAAFLMQRKYEPRGPL 805
K FH++LG DV+LFTTDGA+EKFL CG L+GLYATVDFG ANITAAF +QRK EP+GPL
Sbjct: 206 KLFHHHLGNDVLLFTTDGANEKFLQCGALQGLYATVDFGPGANITAAFQIQRKSEPKGPL 265
Query: 806 INSEFYTGWLDHWGQPHSTVKTQVVASFLHDILALGANVNMYMFIGGTNFAYWNGANTPY 985
+NSEFYTGWLDHWGQPHSTV+T+VVAS LHDILA GANVN+YMFIGGTNFAYWNGAN PY
Sbjct: 266 VNSEFYTGWLDHWGQPHSTVRTEVVASSLHDILAHGANVNLYMFIGGTNFAYWNGANMPY 325
Query: 986 QPQPTSYDYDAPLSEAGDLTEKYFALRDVIQKFKKVPEGLIPPSTPKFAYGKVALKKLKT 1165
Q QPTSYDYDAPLSEAGDLTEKYFALR+VI+KF+KVPEG IPPSTPKFAYGKVALKKLKT
Sbjct: 326 QAQPTSYDYDAPLSEAGDLTEKYFALREVIRKFEKVPEGFIPPSTPKFAYGKVALKKLKT 385
Query: 1166 VVEALDILCPSGPIKSFYPLTFIQVKQYFGFVLYRTTLPKDCKDPTHLSSPFNGVHDRAY 1345
V EAL++LCP GPI S YPLTFIQVKQYFGFV+YRTTLP+DC DPT LSSP +GVHDRAY
Sbjct: 386 VEEALNVLCPPGPINSLYPLTFIQVKQYFGFVMYRTTLPQDCSDPTPLSSPLSGVHDRAY 445
Query: 1346 VSVDGVPQGVLERNIVITLNITGKAGATLDLLVENMGRVNYGNSINDFKGLISNLTLGSS 1525
VSVDGVPQGV+ER+ VITLNITGKAGATLDLLVENMGRVNYG INDFKGLISNLTLGSS
Sbjct: 446 VSVDGVPQGVMERSNVITLNITGKAGATLDLLVENMGRVNYGRYINDFKGLISNLTLGSS 505
Query: 1526 ILTDWQIFPMDTEDAVRRYLGAWHGYGGKGHHEAHTHSPSEYTLPAFYVANFSIPSEIPD 1705
ILT+W IFP++TEDAVR +LG WHG H + H S YTLPAFY+ NFSIPS IPD
Sbjct: 506 ILTNWMIFPLNTEDAVRSHLGGWHGPNNGRHDKTFAHRSSNYTLPAFYMGNFSIPSGIPD 565
Query: 1706 LPQDTFIQFPGWTKGQVWINGFNLGRYWPARGPQKTLFVPQHILVTSAPNTIIVLELEHA 1885
LPQDTFIQFPGWTKGQVWINGFNLGRYWPARGPQ TLFVP+HILVTS PNTI+VLELEHA
Sbjct: 566 LPQDTFIQFPGWTKGQVWINGFNLGRYWPARGPQMTLFVPRHILVTSTPNTIMVLELEHA 625
Query: 1886 PCGDKEP--CTVEFVDKPLIGATETWSHVPQD 1975
PCGD P CTVEFVD+P+IGA T H P D
Sbjct: 626 PCGDSGPEVCTVEFVDRPVIGAPPTPGHPPPD 657
>ref|XP_851411.1| PREDICTED: similar to galactosidase, beta 1-like isoform 2 [Canis
familiaris].
Length = 651
Score = 664 bits (1712), Expect = 0.0
Identities = 334/619 (53%), Positives = 421/619 (68%), Gaps = 3/619 (0%)
Frame = +2
Query: 101 RTFKIDYNRNCFLKDGQPFRYISGSIHYFRMPRFYWKDRLLKMKMAGLNAIETYVAWNFH 280
R+F +D + FL DG PFRY+SGS+HYFR+PR W DRL KM+M+GLN ++ YV WN+H
Sbjct: 27 RSFIVDRINDRFLLDGAPFRYVSGSLHYFRVPRVLWADRLFKMRMSGLNTVQFYVPWNYH 86
Query: 281 EPWPGKYQFTGDHDVEYFIRLAHQLGLLVILRPGPYICAEWDMGGLPAWLLEKESIVLRS 460
EP PG Y F G D+ F++ A LLVILRPGPYICAEWDMGGLPAWLL+K I LR+
Sbjct: 87 EPEPGVYNFNGSRDLFAFLKEASLANLLVILRPGPYICAEWDMGGLPAWLLQKPEINLRT 146
Query: 461 SHPDYLAAVDKWLGVLLPKMKPLLYQNGGPIITVQVENEYGSYYSCDYNYLRFLQKRFHY 640
S PD+LAAVD W VLLPK+ P LY NGG II++QVENEYGSY +CD NY++ L F
Sbjct: 147 SDPDFLAAVDSWFKVLLPKLYPWLYHNGGNIISIQVENEYGSYRACDVNYMKHLAGLFRA 206
Query: 641 YLGEDVVLFTTDGAHEKFLACGTLEGLYATVDFGVDANITAAFLMQRKYEPRGPLINSEF 820
LG+ ++LFTTDG + L CG+L+GLY TVDFG N+T F + R YEP GPL+NSE+
Sbjct: 207 LLGDRILLFTTDG--PEGLRCGSLQGLYTTVDFGPADNMTKIFALLRNYEPHGPLVNSEY 264
Query: 821 YTGWLDHWGQPHSTVKTQVVASFLHDILALGANVNMYMFIGGTNFAYWNGANTP--YQPQ 994
YTGWLD+WGQ HST V L ++L LGA+VNMYMF GGTNF YWNGA+ + P
Sbjct: 265 YTGWLDYWGQNHSTRSVLAVTRGLENMLKLGASVNMYMFHGGTNFGYWNGADEKGRFLPI 324
Query: 995 PTSYDYDAPLSEAGDLTEKYFALRDVIQKFKKVPEGLIPPSTPKFAYGKVALKKLKTVVE 1174
TSYDYDAP+SEAGDLT K FALR+VI +F+++P G +PP +PK G + L ++
Sbjct: 325 TTSYDYDAPISEAGDLTPKLFALRNVISEFQEIPLGPLPPPSPKMMLGPLTLHLDGDLLA 384
Query: 1175 ALDILCPSGPIKSFYPLTFIQVKQYFGFVLYRTTLPKDCKDPTHLSSPFNGVHDRAYVSV 1354
LD LCP GPI S PL+F VKQ GF+LYRT LP +PT P NGVHDRAYV V
Sbjct: 385 FLDFLCPQGPIHSILPLSFEAVKQDHGFMLYRTFLPHPIPEPTQFWVPNNGVHDRAYVMV 444
Query: 1355 DGVPQGVLERNIVITLNITGKAGATLDLLVENMGRVNYGNSINDFKGLISNLTLGSSILT 1534
DGV GVLERN+ L +TGK GA LD+L+ENMGR+++G++ +DFKGL+ LG +LT
Sbjct: 445 DGVFHGVLERNMKHQLFLTGKGGAKLDILLENMGRLSFGSNSSDFKGLLEPPVLGQMVLT 504
Query: 1535 DWQIFPMDTEDAVRRYLGAWHGYGGKGHHEAHTHSPSEYTLPAFYVANFSIPSEIPDLPQ 1714
W +FP++ + V+ + H + P + P FY F I E
Sbjct: 505 QWLMFPLNVDKLVKWWFPL---------HLMKSTRPQAPSGPTFYSTTFPIFGE----GG 551
Query: 1715 DTFIQFPGWTKGQVWINGFNLGRYWPARGPQKTLFVPQHILVT-SAPNTIIVLELEHAPC 1891
DTF+ PGWTKGQVWINGFNLGRYW RGPQ+TL+VP+ +L + N I +LELE P
Sbjct: 552 DTFLFLPGWTKGQVWINGFNLGRYWTKRGPQQTLYVPRPLLFSRGGLNKITLLELESVPL 611
Query: 1892 GDKEPCTVEFVDKPLIGAT 1948
+ ++FVD+P++ +T
Sbjct: 612 QPQ----IQFVDRPILNST 626
>ref|XP_855681.1| PREDICTED: similar to CG3132-PA isoform 2 [Canis familiaris].
Length = 638
Score = 373 bits (958), Expect = e-103
Identities = 238/621 (38%), Positives = 338/621 (54%), Gaps = 15/621 (2%)
Frame = +2
Query: 134 FLKDGQPFRYISGSIHYFRMPRFYWKDRLLKMKMAGLNAIETYVAWNFHEPWPGKYQFTG 313
F + F + GS+HYFR+PR YW+DRLLK+K GLN + TYV WN HEP GK+ F+G
Sbjct: 54 FTLEDSTFWILGGSMHYFRVPREYWRDRLLKLKACGLNTLTTYVPWNLHEPERGKFDFSG 113
Query: 314 DHDVEYFIRLAHQLGLLVILRPGPYICAEWDMGGLPAWLLEKESIVLRSSHPDYLAAVDK 493
+ D+E F+ LA ++GL VILRPGPYIC+E D+GGLP+WLL+ + LR+++ + AVD
Sbjct: 114 NLDMEAFVLLAAEMGLWVILRPGPYICSEIDLGGLPSWLLQDSGMRLRTTYKGFTEAVDL 173
Query: 494 WLGVLLPKMKPLLYQNGGPIITVQVENEYGSYYSCDYNYLRFLQKRFHYYLGEDVVLFTT 673
+ L+ ++ PL Y++GGPII VQVENEYGS Y+ D Y+ +++K G +L T+
Sbjct: 174 YFDHLMARVVPLQYKHGGPIIAVQVENEYGS-YNKDPAYMPYIKKALE-DRGIVELLLTS 231
Query: 674 DGAHEKFLACGTLEGLYATVDFGV--DANITAAFLMQRKYEPRGPLINSEFYTGWLDHWG 847
D ++ L G L+G AT++ + + FL P + E++TGW D WG
Sbjct: 232 D--NKDGLQKGVLDGALATINLQSQHELQLLTNFLKDHHQRDEKPRMVMEYWTGWFDSWG 289
Query: 848 QPHSTVKTQVVASFLHDILALGANVNMYMFIGGTNFAYWNGAN--TPYQPQPTSYDYDAP 1021
PH+ + + V + IL G+++N+YMF GGTNF + NGA Y+ TSYDYDA
Sbjct: 290 GPHNILDSSEVLKTVSAILDAGSSINLYMFHGGTNFGFINGAMHFHEYKSDVTSYDYDAV 349
Query: 1022 LSEAGDLTEKYFALRDVIQKFKKVPEGLIPPSTPKFAYGKVALKKLKTVVEALDILCPSG 1201
L+EAGD T KYF LRD VP P PK AY V ++ +AL +
Sbjct: 350 LTEAGDYTAKYFKLRDFFGSLSGVPLPPQPSLLPKIAYEPVRPNLYLSLWDALQHM--EE 407
Query: 1202 PIKSFYPLTFIQVK------QYFGFVLYRTTLPKDCKDPTHLSSPFNG-VHDRAYVSVDG 1360
P+ S P+ + Q FG+ LY TT+ S +G V DR V V+
Sbjct: 408 PVSSEKPVNMENLPVNDGNGQSFGYTLYETTIAS--------SGVLSGLVRDRGQVFVNT 459
Query: 1361 VPQGVLE---RNIVITLNITGKAGATLDLLVENMGRVNYGNSIND-FKGLISNLTLGSSI 1528
V G L+ + IVI L + L +LVEN GRVNYG++I+D KGLI N+ L +
Sbjct: 460 VSVGFLDYERKKIVIPL---VQGYTRLRILVENRGRVNYGDNIDDQRKGLIGNIYLNDAP 516
Query: 1529 LTDWQIFPMDTEDAVRRYLGAWHGYGGKGHHEAHTHSPSEYTLPAFYVANFSIPSEIPDL 1708
L ++I+ +D + + + + P T PAF++ SI
Sbjct: 517 LKKFRIYSLDMRKSFFQRFSV----------DKWSPIPEAPTFPAFFLGALSISLS---- 562
Query: 1709 PQDTFIQFPGWTKGQVWINGFNLGRYWPARGPQKTLFVPQHILVTSAPNTIIVLELEHAP 1888
P DTF++ GW KG V+ING NLGRYW GPQ+TL++P L I+ E P
Sbjct: 563 PFDTFMKLEGWEKGVVFINGQNLGRYWNI-GPQETLYLPGAWLDQGINQVIVFEERMAGP 621
Query: 1889 CGDKEPCTVEFVDKPLIGATE 1951
++F + P +G ++
Sbjct: 622 -------AIQFTETPHLGRSQ 635
>ref|XP_848226.1| PREDICTED: similar to CG3132-PA isoform 1 [Canis familiaris].
Length = 636
Score = 370 bits (950), Expect = e-102
Identities = 239/622 (38%), Positives = 343/622 (55%), Gaps = 16/622 (2%)
Frame = +2
Query: 134 FLKDGQPFRYISGSIHYFRMPRFYWKDRLLKMKMAGLNAIETYVAWNFHEPWPGKYQFTG 313
F + F + GS+HYFR+PR YW+DRLLK+K GLN + TYV WN HEP GK+ F+G
Sbjct: 54 FTLEDSTFWILGGSMHYFRVPREYWRDRLLKLKACGLNTLTTYVPWNLHEPERGKFDFSG 113
Query: 314 DHDVEYFIRLAHQLGLLVILRPGPYICAEWDMGGLPAWLLEKESIVLRSSHPDYLAAVDK 493
+ D+E F+ LA ++GL VILRPGPYIC+E D+GGLP+WLL+ + LR+++ + AVD
Sbjct: 114 NLDMEAFVLLAAEMGLWVILRPGPYICSEIDLGGLPSWLLQDSGMRLRTTYKGFTEAVDL 173
Query: 494 WLGVLLPKMKPLLYQNGGPIITVQVENEYGSYYSCDYNYLRFLQKRFHYYLGEDVVLFTT 673
+ L+ ++ PL Y++GGPII VQVENEYGS Y+ D Y+ +++K G +L T+
Sbjct: 174 YFDHLMARVVPLQYKHGGPIIAVQVENEYGS-YNKDPAYMPYIKKALE-DRGIVELLLTS 231
Query: 674 DGAHEKFLACGTLEGLYATVDFGV--DANITAAFLMQ-RKYEPRGPLINSEFYTGWLDHW 844
D ++ L G L+G AT++ + + FL+ ++ +PR + E++TGW D W
Sbjct: 232 D--NKDGLQKGVLDGALATINLQSQHELQLLTNFLVSVQRVQPR---MVMEYWTGWFDSW 286
Query: 845 GQPHSTVKTQVVASFLHDILALGANVNMYMFIGGTNFAYWNGAN--TPYQPQPTSYDYDA 1018
G PH+ + + V + IL G+++N+YMF GGTNF + NGA Y+ TSYDYDA
Sbjct: 287 GGPHNILDSSEVLKTVSAILDAGSSINLYMFHGGTNFGFINGAMHFHEYKSDVTSYDYDA 346
Query: 1019 PLSEAGDLTEKYFALRDVIQKFKKVPEGLIPPSTPKFAYGKVALKKLKTVVEALDILCPS 1198
L+EAGD T KYF LRD VP P PK AY V ++ +AL +
Sbjct: 347 VLTEAGDYTAKYFKLRDFFGSLSGVPLPPQPSLLPKIAYEPVRPNLYLSLWDALQHM--E 404
Query: 1199 GPIKSFYPLTFIQVK------QYFGFVLYRTTLPKDCKDPTHLSSPFNG-VHDRAYVSVD 1357
P+ S P+ + Q FG+ LY TT+ S +G V DR V V+
Sbjct: 405 EPVSSEKPVNMENLPVNDGNGQSFGYTLYETTIAS--------SGVLSGLVRDRGQVFVN 456
Query: 1358 GVPQGVLE---RNIVITLNITGKAGATLDLLVENMGRVNYGNSIND-FKGLISNLTLGSS 1525
V G L+ + IVI L + L +LVEN GRVNYG++I+D KGLI N+ L +
Sbjct: 457 TVSVGFLDYERKKIVIPL---VQGYTRLRILVENRGRVNYGDNIDDQRKGLIGNIYLNDA 513
Query: 1526 ILTDWQIFPMDTEDAVRRYLGAWHGYGGKGHHEAHTHSPSEYTLPAFYVANFSIPSEIPD 1705
L ++I+ +D + + + + P T PAF++ SI
Sbjct: 514 PLKKFRIYSLDMRKSFFQRFSV----------DKWSPIPEAPTFPAFFLGALSISLS--- 560
Query: 1706 LPQDTFIQFPGWTKGQVWINGFNLGRYWPARGPQKTLFVPQHILVTSAPNTIIVLELEHA 1885
P DTF++ GW KG V+ING NLGRYW GPQ+TL++P L I+ E
Sbjct: 561 -PFDTFMKLEGWEKGVVFINGQNLGRYWNI-GPQETLYLPGAWLDQGINQVIVFEERMAG 618
Query: 1886 PCGDKEPCTVEFVDKPLIGATE 1951
P ++F + P +G ++
Sbjct: 619 P-------AIQFTETPHLGRSQ 633
>ref|XP_855708.1| PREDICTED: similar to CG3132-PA isoform 3 [Canis familiaris].
Length = 631
Score = 369 bits (946), Expect = e-102
Identities = 239/620 (38%), Positives = 339/620 (54%), Gaps = 14/620 (2%)
Frame = +2
Query: 134 FLKDGQPFRYISGSIHYFRMPRFYWKDRLLKMKMAGLNAIETYVAWNFHEPWPGKYQFTG 313
F + F + GS+HYFR+PR YW+DRLLK+K GLN + TYV WN HEP GK+ F+G
Sbjct: 54 FTLEDSTFWILGGSMHYFRVPREYWRDRLLKLKACGLNTLTTYVPWNLHEPERGKFDFSG 113
Query: 314 DHDVEYFIRLAHQLGLLVILRPGPYICAEWDMGGLPAWLLEKESIVLRSSHPDYLAAVDK 493
+ D+E F+ LA ++GL VILRPGPYIC+E D+GGLP+WLL+ + LR+++ + AVD
Sbjct: 114 NLDMEAFVLLAAEMGLWVILRPGPYICSEIDLGGLPSWLLQDSGMRLRTTYKGFTEAVDL 173
Query: 494 WLGVLLPKMKPLLYQNGGPIITVQVENEYGSYYSCDYNYLRFLQKRFHYYLGEDVVLFTT 673
+ L+ ++ PL Y++GGPII VQVENEYGS Y+ D Y+ +++K G +L T+
Sbjct: 174 YFDHLMARVVPLQYKHGGPIIAVQVENEYGS-YNKDPAYMPYIKKALE-DRGIVELLLTS 231
Query: 674 DGAHEKFLACGTLEGLYATVDFGVDANITAAFLMQRKYEPR-GPLINSEFYTGWLDHWGQ 850
D ++ L G L+G AT+ N+ + R + R P + E++TGW D WG
Sbjct: 232 D--NKDGLQKGVLDGALATI------NLQSVTPQARGHLHRVQPRMVMEYWTGWFDSWGG 283
Query: 851 PHSTVKTQVVASFLHDILALGANVNMYMFIGGTNFAYWNGAN--TPYQPQPTSYDYDAPL 1024
PH+ + + V + IL G+++N+YMF GGTNF + NGA Y+ TSYDYDA L
Sbjct: 284 PHNILDSSEVLKTVSAILDAGSSINLYMFHGGTNFGFINGAMHFHEYKSDVTSYDYDAVL 343
Query: 1025 SEAGDLTEKYFALRDVIQKFKKVPEGLIPPSTPKFAYGKVALKKLKTVVEALDILCPSGP 1204
+EAGD T KYF LRD VP P PK AY V ++ +AL + P
Sbjct: 344 TEAGDYTAKYFKLRDFFGSLSGVPLPPQPSLLPKIAYEPVRPNLYLSLWDALQHM--EEP 401
Query: 1205 IKSFYPLTFIQVK------QYFGFVLYRTTLPKDCKDPTHLSSPFNG-VHDRAYVSVDGV 1363
+ S P+ + Q FG+ LY TT+ S +G V DR V V+ V
Sbjct: 402 VSSEKPVNMENLPVNDGNGQSFGYTLYETTIAS--------SGVLSGLVRDRGQVFVNTV 453
Query: 1364 PQGVLE---RNIVITLNITGKAGATLDLLVENMGRVNYGNSIND-FKGLISNLTLGSSIL 1531
G L+ + IVI L + L +LVEN GRVNYG++I+D KGLI N+ L + L
Sbjct: 454 SVGFLDYERKKIVIPL---VQGYTRLRILVENRGRVNYGDNIDDQRKGLIGNIYLNDAPL 510
Query: 1532 TDWQIFPMDTEDAVRRYLGAWHGYGGKGHHEAHTHSPSEYTLPAFYVANFSIPSEIPDLP 1711
++I+ +D + + + + P T PAF++ SI P
Sbjct: 511 KKFRIYSLDMRKSFFQRFSV----------DKWSPIPEAPTFPAFFLGALSISLS----P 556
Query: 1712 QDTFIQFPGWTKGQVWINGFNLGRYWPARGPQKTLFVPQHILVTSAPNTIIVLELEHAPC 1891
DTF++ GW KG V+ING NLGRYW GPQ+TL++P L I+ E P
Sbjct: 557 FDTFMKLEGWEKGVVFINGQNLGRYWNI-GPQETLYLPGAWLDQGINQVIVFEERMAGP- 614
Query: 1892 GDKEPCTVEFVDKPLIGATE 1951
++F + P +G ++
Sbjct: 615 ------AIQFTETPHLGRSQ 628
>ref|XP_546385.2| PREDICTED: similar to T19B10.3 [Canis familiaris].
Length = 908
Score = 343 bits (880), Expect = 4e-94
Identities = 226/614 (36%), Positives = 321/614 (52%), Gaps = 11/614 (1%)
Frame = +2
Query: 131 CFLKDGQPFRYISGSIHYFRMPRFYWKDRLLKMKMAGLNAIETYVAWNFHEPWPGKYQFT 310
CF G F+ GSIHYFR+PR YW DRL K+K G N + TYV WN HEP GK+ F+
Sbjct: 334 CFTLGGHKFQVFGGSIHYFRVPRAYWGDRLRKLKACGFNTVTTYVPWNLHEPERGKFDFS 393
Query: 311 GDHDVEYFIRLAHQLGLLVILRPGPYICAEWDMGGLPAWLLEKESIVLRSSHPDYLAAVD 490
G+ D+E F+ LA ++GL VILRPGPYIC+E D+GGLP+WLL+ +VLR+++ ++ AVD
Sbjct: 394 GNLDMEAFVLLAAEMGLWVILRPGPYICSEIDLGGLPSWLLQDPKMVLRTTYSGFVKAVD 453
Query: 491 KWLGVLLPKMKPLLYQNGGPIITVQVENEYGSYYSCDYNYLRFLQKRFHYYLGEDVVLFT 670
K+ L+ ++ PL Y+ GGPII VQVENEYGS+ D Y+ +LQK G +L T
Sbjct: 454 KYFDHLISRVVPLQYRRGGPIIAVQVENEYGSFAE-DRGYMPYLQKAL-LERGIVELLVT 511
Query: 671 TDGAHEKFLACGTLEGLYATVDFGVDANITAAFLMQRKYEPRGPLINSEFYTGWLDHWGQ 850
+D A L G ++G+ AT++ +++ + F + + P++ EF+ GW D WG
Sbjct: 512 SDDAEN--LLKGHIKGVLATIN--MNSFQESDFKLLSYVQSNKPIMVMEFWVGWFDTWGS 567
Query: 851 PHSTVKTQVVASFLHDILALGANVNMYMFIGGTNFAYWNGANT--PYQPQPTSYDYDAPL 1024
H + V + +A + N+YMF GGTNF + NGA ++ TSYDYDA L
Sbjct: 568 EHKVKNPKDVEETVTKFIASEISFNVYMFHGGTNFGFMNGATDFGIHRGVVTSYDYDAVL 627
Query: 1025 SEAGDLTEKYFALRDVIQKFKKVPEGLIPPSTPKFAYGKVALKKLKTVVEALDILCPSGP 1204
+EAGD TEKYF LR + +P +P TPK Y V + + L L + P
Sbjct: 628 TEAGDYTEKYFKLRRLFGSVSAIPLPPLPELTPKAEYPSVKPSLYLPLWDVLQYL--NEP 685
Query: 1205 IKSFYPLTFIQVK------QYFGFVLYRTTLPKDCKDPTHLSSPFNGVHDRAYVSVDGVP 1366
+ S P+ + Q +GFVLY T++ C S VHD A V ++ +
Sbjct: 686 VMSNTPVNMENLPINGGNGQSYGFVLYETSI---CSG----GSLRADVHDTAQVFLNEIN 738
Query: 1367 QGVLERNIVITLNITGKAGATLDLLVENMGRVNYGNSIND-FKGLISNLTLGSSILTDWQ 1543
G L + T L +LVEN GRVN+ I D KGL ++T+ + L +
Sbjct: 739 IGHLHDHAKTLTVPTMTRCQLLRILVENQGRVNFSWKIQDQRKGLTGSVTINNMPLQGFA 798
Query: 1544 IFPMD-TEDAVRRYLGA-WHGYGGKGHHEAHTHSPSEYTLPAFYVANFSIPSEIPDLPQD 1717
I+ ++ T R A W P PAFY+ + S P+D
Sbjct: 799 IYSLEMTMSFFERLRSATWRPV------------PKACLGPAFYLGTLKVDSS----PKD 842
Query: 1718 TFIQFPGWTKGQVWINGFNLGRYWPARGPQKTLFVPQHILVTSAPNTIIVLELEHAPCGD 1897
TF++ W G +ING NLGRY GPQ TL++P L P ++ E CG
Sbjct: 843 TFLRLRTWNSGFAFINGHNLGRY-SIMGPQGTLYLPGAWL---HPEDNEIILFEKRKCGS 898
Query: 1898 KEPCTVEFVDKPLI 1939
++ D+P++
Sbjct: 899 ----YIQTTDEPVL 908
>ref|XP_849131.1| PREDICTED: similar to beta-galactosidase-like protein [Canis
familiaris].
Length = 938
Score = 300 bits (769), Expect = 3e-81
Identities = 208/594 (35%), Positives = 305/594 (51%), Gaps = 14/594 (2%)
Frame = +2
Query: 134 FLKDGQPFRYISGSIHYFRMPRFYWKDRLLKMKMAGLNAIETYVAWNFHEPWPGKYQFTG 313
F DG PF I+G+IHYFR+PR YW+DRL K+K G N + T++ WN HEP G + FT
Sbjct: 354 FTLDGSPFLIIAGTIHYFRVPREYWRDRLQKLKACGFNTVTTHIPWNLHEPRKGWFYFTA 413
Query: 314 DHDVEYFIRLAHQLGLLVILRPGPYICAEWDMGGLPAWLLEKESIVLRSSHPDYLAAVDK 493
+ D F+ +A + GL VIL PGPY+ + D+GGLP+WLL + LR+++ + AV+
Sbjct: 414 NLDFVTFVAMASEAGLWVILCPGPYVGGDLDLGGLPSWLLRDPKMKLRTTYKGFTKAVNH 473
Query: 494 WLGVLLPKMKPLLYQNGGPIITVQVENEYGSYYSCDYNYLRFLQKRFHYYLGEDVVLFTT 673
+ ++P + L Y GGPII VQVENEYGSY+ D YL++++K G V+L T
Sbjct: 474 YFDKIIPMIVQLQYAKGGPIIAVQVENEYGSYHQ-DKRYLKYIKKAL-VTRGIKVLLMTG 531
Query: 674 DGAHEKFLACGTLEGLYATVDFGVDANITAAFLMQRKYEPRGPLINSEFYTGWLDHWGQP 853
D + L G L +TV T L + R P++ + LD WG
Sbjct: 532 DDG--EALTRGHLTQALSTVHMRHIKKETYDTLF--SLQGRSPILMMVYTARSLDGWGTA 587
Query: 854 HSTVKTQVVASFLHDILALGANVNMYMFIGGTNFAYWNGANT--PYQPQPTSYDYDAPLS 1027
+ ++ + ++ ++N YMF GGTNF + G+ + Y P TSYDY A L+
Sbjct: 588 PHFADSHMLKKEVREMFNASFSLNFYMFHGGTNFGFMGGSASLDNYLPMITSYDYGALLT 647
Query: 1028 EAGDLTEKYFALRDVIQKFKKVPEGLIPPSTPKFAYGKVALKKLKTVVEALDILCPSGPI 1207
E G+ T +YF+ +D S PK Y V ++ + + L PI
Sbjct: 648 ENGEYTPEYFSYQDFF--------SFSLDSIPKATYKSVITPYYISLWDVMPYL--EEPI 697
Query: 1208 KSFYPLTFIQVK------QYFGFVLYRTTLPKDCKDPTHLSSPFNGVHDRAYVSVDGVPQ 1369
S P+ ++ Q G+VLY T + L + + DR V VD +
Sbjct: 698 SSVKPICMEKLSVNQGSGQSSGYVLYETMIISG-----GLLTTKGHLQDRGQVFVDDIYI 752
Query: 1370 GVLE---RNIVITLNITGKAGATLDLLVENMGRVNYGNSIN-DFKGLISNLTLGSSILTD 1537
G+L+ ++ I + K TL +LVEN GR+ YG +IN + KGLI ++ L +S L
Sbjct: 753 GILDHSTNHLTIPTKMVYKNNPTLRILVENQGRLAYGQNINKERKGLIGDIYLNNSPLRK 812
Query: 1538 WQIFPMDTEDA-VRRYL-GAWHGYGGKGHHEAHTHSPSEYTLPAFYVANFSIPSEIPDLP 1711
++I+ +D + +RR L W K H+ PAF++ + + P
Sbjct: 813 FKIYSLDMKTKFLRRDLPNIWKPVVFK--HQG----------PAFFLGIL----RMGNYP 856
Query: 1712 QDTFIQFPGWTKGQVWINGFNLGRYWPARGPQKTLFVPQHILVTSAPNTIIVLE 1873
+DTFI+ GWTKG ++ING NLGRYW GPQ+TL++P L N IIV E
Sbjct: 857 RDTFIKMEGWTKGVIFINGQNLGRYWNI-GPQETLYLPGPWL-RPGSNEIIVFE 908
>ref|XP_536076.2| PREDICTED: similar to galactosidase, beta 1-like isoform 1 [Canis
familiaris].
Length = 283
Score = 231 bits (589), Expect = 2e-60
Identities = 124/258 (48%), Positives = 161/258 (62%), Gaps = 1/258 (0%)
Frame = +2
Query: 1178 LDILCPSGPIKSFYPLTFIQVKQYFGFVLYRTTLPKDCKDPTHLSSPFNGVHDRAYVSVD 1357
LD LCP GPI S PL+F VKQ GF+LYRT LP +PT P NGVHDRAYV VD
Sbjct: 18 LDFLCPQGPIHSILPLSFEAVKQDHGFMLYRTFLPHPIPEPTQFWVPNNGVHDRAYVMVD 77
Query: 1358 GVPQGVLERNIVITLNITGKAGATLDLLVENMGRVNYGNSINDFKGLISNLTLGSSILTD 1537
GV GVLERN+ L +TGK GA LD+L+ENMGR+++G++ +DFKGL+ LG +LT
Sbjct: 78 GVFHGVLERNMKHQLFLTGKGGAKLDILLENMGRLSFGSNSSDFKGLLEPPVLGQMVLTQ 137
Query: 1538 WQIFPMDTEDAVRRYLGAWHGYGGKGHHEAHTHSPSEYTLPAFYVANFSIPSEIPDLPQD 1717
W +FP++ + V+ + H + P + P FY F I E D
Sbjct: 138 WLMFPLNVDKLVKWWFPL---------HLMKSTRPQAPSGPTFYSTTFPIFGE----GGD 184
Query: 1718 TFIQFPGWTKGQVWINGFNLGRYWPARGPQKTLFVPQHILVT-SAPNTIIVLELEHAPCG 1894
TF+ PGWTKGQVWINGFNLGRYW RGPQ+TL+VP+ +L + N I +LELE P
Sbjct: 185 TFLFLPGWTKGQVWINGFNLGRYWTKRGPQQTLYVPRPLLFSRGGLNKITLLELESVPLQ 244
Query: 1895 DKEPCTVEFVDKPLIGAT 1948
+ ++FVD+P++ +T
Sbjct: 245 PQ----IQFVDRPILNST 258
>ref|XP_863702.1| PREDICTED: similar to galactosidase, beta 1-like isoform 3 [Canis
familiaris].
Length = 239
Score = 198 bits (504), Expect = 2e-50
Identities = 107/231 (46%), Positives = 143/231 (61%), Gaps = 1/231 (0%)
Frame = +2
Query: 1259 VLYRTTLPKDCKDPTHLSSPFNGVHDRAYVSVDGVPQGVLERNIVITLNITGKAGATLDL 1438
+LYRT LP +PT P NGVHDRAYV VDGV GVLERN+ L +TGK GA LD+
Sbjct: 1 MLYRTFLPHPIPEPTQFWVPNNGVHDRAYVMVDGVFHGVLERNMKHQLFLTGKGGAKLDI 60
Query: 1439 LVENMGRVNYGNSINDFKGLISNLTLGSSILTDWQIFPMDTEDAVRRYLGAWHGYGGKGH 1618
L+ENMGR+++G++ +DFKGL+ LG +LT W +FP++ + V+ +
Sbjct: 61 LLENMGRLSFGSNSSDFKGLLEPPVLGQMVLTQWLMFPLNVDKLVKWWFPL--------- 111
Query: 1619 HEAHTHSPSEYTLPAFYVANFSIPSEIPDLPQDTFIQFPGWTKGQVWINGFNLGRYWPAR 1798
H + P + P FY F I E DTF+ PGWTKGQVWINGFNLGRYW R
Sbjct: 112 HLMKSTRPQAPSGPTFYSTTFPIFGE----GGDTFLFLPGWTKGQVWINGFNLGRYWTKR 167
Query: 1799 GPQKTLFVPQHILVT-SAPNTIIVLELEHAPCGDKEPCTVEFVDKPLIGAT 1948
GPQ+TL+VP+ +L + N I +LELE P + ++FVD+P++ +T
Sbjct: 168 GPQQTLYVPRPLLFSRGGLNKITLLELESVPLQPQ----IQFVDRPILNST 214
Database: RefSeq49_CP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,874,504
Number of sequences in database: 33,336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33336
Number of Hits to DB: 103,841,853
Number of extensions: 3059410
Number of successful extensions: 9551
Number of sequences better than 1.0e-05: 9
Number of HSP's gapped: 9510
Number of HSP's successfully gapped: 9
Length of query: 778
Length of database: 18,874,504
Length adjustment: 111
Effective length of query: 667
Effective length of database: 15,174,208
Effective search space: 10121196736
Effective search space used: 10121196736
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to RefSeqHP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AMP01_0068_C04
(2336 letters)
Database: RefSeq49_HP.fasta
32,964 sequences; 18,297,164 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_000395.2| beta-galactosidase isoform a preproprotein [Hom... 1085 0.0
Alignment gi|NP_001073279.1| beta-galactosidase isoform b [Homo sapiens]. 1080 0.0
Alignment gi|NP_001129074.1| beta-galactosidase isoform c preproprotein [... 684 0.0
Alignment gi|NP_078782.3| beta-galactosidase-1-like protein precursor [Ho... 668 0.0
Alignment gi|NP_612351.2| beta-galactosidase-1-like protein 2 precursor [... 382 e-105
Alignment gi|NP_001073876.2| beta-galactosidase-1-like protein 3 [Homo sa... 337 3e-92
>ref|NP_000395.2| beta-galactosidase isoform a preproprotein [Homo sapiens].
Length = 677
Score = 1085 bits (2807), Expect = 0.0
Identities = 517/649 (79%), Positives = 573/649 (88%), Gaps = 14/649 (2%)
Frame = +2
Query: 86 KNAPLRTFKIDYNRNCFLKDGQPFRYISGSIHYFRMPRFYWKDRLLKMKMAGLNAIETYV 265
+NA R F+IDY+R+ FLKDGQPFRYISGSIHY R+PRFYWKDRLLKMKMAGLNAI+TYV
Sbjct: 25 RNATQRMFEIDYSRDSFLKDGQPFRYISGSIHYSRVPRFYWKDRLLKMKMAGLNAIQTYV 84
Query: 266 AWNFHEPWPGKYQFTGDHDVEYFIRLAHQLGLLVILRPGPYICAEWDMGGLPAWLLEKES 445
WNFHEPWPG+YQF+ DHDVEYF+RLAH+LGLLVILRPGPYICAEW+MGGLPAWLLEKES
Sbjct: 85 PWNFHEPWPGQYQFSEDHDVEYFLRLAHELGLLVILRPGPYICAEWEMGGLPAWLLEKES 144
Query: 446 IVLRSSHPDYLAAVDKWLGVLLPKMKPLLYQNGGPIITVQVENEYGSYYSCDYNYLRFLQ 625
I+LRSS PDYLAAVDKWLGVLLPKMKPLLYQNGGP+ITVQVENEYGSY++CD++YLRFLQ
Sbjct: 145 ILLRSSDPDYLAAVDKWLGVLLPKMKPLLYQNGGPVITVQVENEYGSYFACDFDYLRFLQ 204
Query: 626 KRFHYYLGEDVVLFTTDGAHEKFLACGTLEGLYATVDFGVDANITAAFLMQRKYEPRGPL 805
KRF ++LG+DVVLFTTDGAH+ FL CG L+GLY TVDFG +NIT AFL QRK EP+GPL
Sbjct: 205 KRFRHHLGDDVVLFTTDGAHKTFLKCGALQGLYTTVDFGTGSNITDAFLSQRKCEPKGPL 264
Query: 806 INSEFYTGWLDHWGQPHSTVKTQVVASFLHDILALGANVNMYMFIGGTNFAYWNGANTPY 985
INSEFYTGWLDHWGQPHST+KT+ VAS L+DILA GA+VN+YMFIGGTNFAYWNGAN+PY
Sbjct: 265 INSEFYTGWLDHWGQPHSTIKTEAVASSLYDILARGASVNLYMFIGGTNFAYWNGANSPY 324
Query: 986 QPQPTSYDYDAPLSEAGDLTEKYFALRDVIQKFKKVPEGLIPPSTPKFAYGKVALKKLKT 1165
QPTSYDYDAPLSEAGDLTEKYFALR++IQKF+KVPEG IPPSTPKFAYGKV L+KLKT
Sbjct: 325 AAQPTSYDYDAPLSEAGDLTEKYFALRNIIQKFEKVPEGPIPPSTPKFAYGKVTLEKLKT 384
Query: 1166 VVEALDILCPSGPIKSFYPLTFIQVKQYFGFVLYRTTLPKDCKDPTHLSSPFNGVHDRAY 1345
V ALDILCPSGPIKS YPLTFIQVKQ++GFVLYRTTLP+DC +P LSSP NGVHDRAY
Sbjct: 385 VGAALDILCPSGPIKSLYPLTFIQVKQHYGFVLYRTTLPQDCSNPAPLSSPLNGVHDRAY 444
Query: 1346 VSVDGVPQGVLERNIVITLNITGKAGATLDLLVENMGRVNYGNSINDFKGLISNLTLGSS 1525
V+VDG+PQGVLERN VITLNITGKAGATLDLLVENMGRVNYG INDFKGL+SNLTL S+
Sbjct: 445 VAVDGIPQGVLERNNVITLNITGKAGATLDLLVENMGRVNYGAYINDFKGLVSNLTLSSN 504
Query: 1526 ILTDWQIFPMDTEDAVRRYLGAWHGYGGKGHH-EAHTHSPSEYTLPAFYVANFSIPSEIP 1702
ILTDW IFP+DTEDAVR +LG W G+ GHH EA H+ S YTLPAFY+ NFSIPS IP
Sbjct: 505 ILTDWTIFPLDTEDAVRSHLGGW-GHRDSGHHDEAWAHNSSNYTLPAFYMGNFSIPSGIP 563
Query: 1703 DLPQDTFIQFPGWTKGQVWINGFNLGRYWPARGPQKTLFVPQHILVTSAPNTIIVLELEH 1882
DLPQDTFIQFPGWTKGQVWINGFNLGRYWPARGPQ TLFVPQHIL+TSAPNTI VLELE
Sbjct: 564 DLPQDTFIQFPGWTKGQVWINGFNLGRYWPARGPQLTLFVPQHILMTSAPNTITVLELEW 623
Query: 1883 APCGDKEP--CTVEFVDKPLIGATETWSH-----------VPQDQNRDS 1990
APC +P C V FVD+P+IG++ T+ H P +N+DS
Sbjct: 624 APCSSDDPELCAVTFVDRPVIGSSVTYDHPSKPVEKRLMPPPPQKNKDS 672
>ref|NP_001073279.1| beta-galactosidase isoform b [Homo sapiens].
Length = 647
Score = 1080 bits (2794), Expect = 0.0
Identities = 514/642 (80%), Positives = 569/642 (88%), Gaps = 14/642 (2%)
Frame = +2
Query: 107 FKIDYNRNCFLKDGQPFRYISGSIHYFRMPRFYWKDRLLKMKMAGLNAIETYVAWNFHEP 286
F+IDY+R+ FLKDGQPFRYISGSIHY R+PRFYWKDRLLKMKMAGLNAI+TYV WNFHEP
Sbjct: 2 FEIDYSRDSFLKDGQPFRYISGSIHYSRVPRFYWKDRLLKMKMAGLNAIQTYVPWNFHEP 61
Query: 287 WPGKYQFTGDHDVEYFIRLAHQLGLLVILRPGPYICAEWDMGGLPAWLLEKESIVLRSSH 466
WPG+YQF+ DHDVEYF+RLAH+LGLLVILRPGPYICAEW+MGGLPAWLLEKESI+LRSS
Sbjct: 62 WPGQYQFSEDHDVEYFLRLAHELGLLVILRPGPYICAEWEMGGLPAWLLEKESILLRSSD 121
Query: 467 PDYLAAVDKWLGVLLPKMKPLLYQNGGPIITVQVENEYGSYYSCDYNYLRFLQKRFHYYL 646
PDYLAAVDKWLGVLLPKMKPLLYQNGGP+ITVQVENEYGSY++CD++YLRFLQKRF ++L
Sbjct: 122 PDYLAAVDKWLGVLLPKMKPLLYQNGGPVITVQVENEYGSYFACDFDYLRFLQKRFRHHL 181
Query: 647 GEDVVLFTTDGAHEKFLACGTLEGLYATVDFGVDANITAAFLMQRKYEPRGPLINSEFYT 826
G+DVVLFTTDGAH+ FL CG L+GLY TVDFG +NIT AFL QRK EP+GPLINSEFYT
Sbjct: 182 GDDVVLFTTDGAHKTFLKCGALQGLYTTVDFGTGSNITDAFLSQRKCEPKGPLINSEFYT 241
Query: 827 GWLDHWGQPHSTVKTQVVASFLHDILALGANVNMYMFIGGTNFAYWNGANTPYQPQPTSY 1006
GWLDHWGQPHST+KT+ VAS L+DILA GA+VN+YMFIGGTNFAYWNGAN+PY QPTSY
Sbjct: 242 GWLDHWGQPHSTIKTEAVASSLYDILARGASVNLYMFIGGTNFAYWNGANSPYAAQPTSY 301
Query: 1007 DYDAPLSEAGDLTEKYFALRDVIQKFKKVPEGLIPPSTPKFAYGKVALKKLKTVVEALDI 1186
DYDAPLSEAGDLTEKYFALR++IQKF+KVPEG IPPSTPKFAYGKV L+KLKTV ALDI
Sbjct: 302 DYDAPLSEAGDLTEKYFALRNIIQKFEKVPEGPIPPSTPKFAYGKVTLEKLKTVGAALDI 361
Query: 1187 LCPSGPIKSFYPLTFIQVKQYFGFVLYRTTLPKDCKDPTHLSSPFNGVHDRAYVSVDGVP 1366
LCPSGPIKS YPLTFIQVKQ++GFVLYRTTLP+DC +P LSSP NGVHDRAYV+VDG+P
Sbjct: 362 LCPSGPIKSLYPLTFIQVKQHYGFVLYRTTLPQDCSNPAPLSSPLNGVHDRAYVAVDGIP 421
Query: 1367 QGVLERNIVITLNITGKAGATLDLLVENMGRVNYGNSINDFKGLISNLTLGSSILTDWQI 1546
QGVLERN VITLNITGKAGATLDLLVENMGRVNYG INDFKGL+SNLTL S+ILTDW I
Sbjct: 422 QGVLERNNVITLNITGKAGATLDLLVENMGRVNYGAYINDFKGLVSNLTLSSNILTDWTI 481
Query: 1547 FPMDTEDAVRRYLGAWHGYGGKGHH-EAHTHSPSEYTLPAFYVANFSIPSEIPDLPQDTF 1723
FP+DTEDAVR +LG W G+ GHH EA H+ S YTLPAFY+ NFSIPS IPDLPQDTF
Sbjct: 482 FPLDTEDAVRSHLGGW-GHRDSGHHDEAWAHNSSNYTLPAFYMGNFSIPSGIPDLPQDTF 540
Query: 1724 IQFPGWTKGQVWINGFNLGRYWPARGPQKTLFVPQHILVTSAPNTIIVLELEHAPCGDKE 1903
IQFPGWTKGQVWINGFNLGRYWPARGPQ TLFVPQHIL+TSAPNTI VLELE APC +
Sbjct: 541 IQFPGWTKGQVWINGFNLGRYWPARGPQLTLFVPQHILMTSAPNTITVLELEWAPCSSDD 600
Query: 1904 P--CTVEFVDKPLIGATETWSH-----------VPQDQNRDS 1990
P C V FVD+P+IG++ T+ H P +N+DS
Sbjct: 601 PELCAVTFVDRPVIGSSVTYDHPSKPVEKRLMPPPPQKNKDS 642
>ref|NP_001129074.1| beta-galactosidase isoform c preproprotein [Homo sapiens].
Length = 546
Score = 684 bits (1765), Expect = 0.0
Identities = 333/428 (77%), Positives = 367/428 (85%), Gaps = 14/428 (3%)
Frame = +2
Query: 749 ANITAAFLMQRKYEPRGPLINSEFYTGWLDHWGQPHSTVKTQVVASFLHDILALGANVNM 928
+NIT AFL QRK EP+GPLINSEFYTGWLDHWGQPHST+KT+ VAS L+DILA GA+VN+
Sbjct: 115 SNITDAFLSQRKCEPKGPLINSEFYTGWLDHWGQPHSTIKTEAVASSLYDILARGASVNL 174
Query: 929 YMFIGGTNFAYWNGANTPYQPQPTSYDYDAPLSEAGDLTEKYFALRDVIQKFKKVPEGLI 1108
YMFIGGTNFAYWNGAN+PY QPTSYDYDAPLSEAGDLTEKYFALR++IQKF+KVPEG I
Sbjct: 175 YMFIGGTNFAYWNGANSPYAAQPTSYDYDAPLSEAGDLTEKYFALRNIIQKFEKVPEGPI 234
Query: 1109 PPSTPKFAYGKVALKKLKTVVEALDILCPSGPIKSFYPLTFIQVKQYFGFVLYRTTLPKD 1288
PPSTPKFAYGKV L+KLKTV ALDILCPSGPIKS YPLTFIQVKQ++GFVLYRTTLP+D
Sbjct: 235 PPSTPKFAYGKVTLEKLKTVGAALDILCPSGPIKSLYPLTFIQVKQHYGFVLYRTTLPQD 294
Query: 1289 CKDPTHLSSPFNGVHDRAYVSVDGVPQGVLERNIVITLNITGKAGATLDLLVENMGRVNY 1468
C +P LSSP NGVHDRAYV+VDG+PQGVLERN VITLNITGKAGATLDLLVENMGRVNY
Sbjct: 295 CSNPAPLSSPLNGVHDRAYVAVDGIPQGVLERNNVITLNITGKAGATLDLLVENMGRVNY 354
Query: 1469 GNSINDFKGLISNLTLGSSILTDWQIFPMDTEDAVRRYLGAWHGYGGKGHH-EAHTHSPS 1645
G INDFKGL+SNLTL S+ILTDW IFP+DTEDAVR +LG W G+ GHH EA H+ S
Sbjct: 355 GAYINDFKGLVSNLTLSSNILTDWTIFPLDTEDAVRSHLGGW-GHRDSGHHDEAWAHNSS 413
Query: 1646 EYTLPAFYVANFSIPSEIPDLPQDTFIQFPGWTKGQVWINGFNLGRYWPARGPQKTLFVP 1825
YTLPAFY+ NFSIPS IPDLPQDTFIQFPGWTKGQVWINGFNLGRYWPARGPQ TLFVP
Sbjct: 414 NYTLPAFYMGNFSIPSGIPDLPQDTFIQFPGWTKGQVWINGFNLGRYWPARGPQLTLFVP 473
Query: 1826 QHILVTSAPNTIIVLELEHAPCGDKEP--CTVEFVDKPLIGATETWSH-----------V 1966
QHIL+TSAPNTI VLELE APC +P C V FVD+P+IG++ T+ H
Sbjct: 474 QHILMTSAPNTITVLELEWAPCSSDDPELCAVTFVDRPVIGSSVTYDHPSKPVEKRLMPP 533
Query: 1967 PQDQNRDS 1990
P +N+DS
Sbjct: 534 PPQKNKDS 541
Score = 103 bits (256), Expect = 9e-22
Identities = 47/58 (81%), Positives = 53/58 (91%)
Frame = +2
Query: 86 KNAPLRTFKIDYNRNCFLKDGQPFRYISGSIHYFRMPRFYWKDRLLKMKMAGLNAIET 259
+NA R F+IDY+R+ FLKDGQPFRYISGSIHY R+PRFYWKDRLLKMKMAGLNAI+T
Sbjct: 25 RNATQRMFEIDYSRDSFLKDGQPFRYISGSIHYSRVPRFYWKDRLLKMKMAGLNAIQT 82
Score = 56.2 bits (134), Expect = 1e-07
Identities = 27/32 (84%), Positives = 27/32 (84%)
Frame = +1
Query: 472 LPCSCG*VVGCPSAQDEASPLSEWRADYYSAG 567
LP SCG VVG PSAQDEASPLSEWRA Y SAG
Sbjct: 83 LPGSCGQVVGSPSAQDEASPLSEWRASYNSAG 114
>ref|NP_078782.3| beta-galactosidase-1-like protein precursor [Homo sapiens].
Length = 654
Score = 668 bits (1724), Expect = 0.0
Identities = 342/628 (54%), Positives = 427/628 (67%), Gaps = 7/628 (1%)
Frame = +2
Query: 92 APLRTFKIDYNRNCFLKDGQPFRYISGSIHYFRMPRFYWKDRLLKMKMAGLNAIETYVAW 271
A R+F +D + FL DG PFRY+SGS+HYFR+PR W DRLLKM+ +GLNAI+ YV W
Sbjct: 25 ADTRSFVVDRGHDRFLLDGAPFRYVSGSLHYFRVPRVLWADRLLKMRWSGLNAIQFYVPW 84
Query: 272 NFHEPWPGKYQFTGDHDVEYFIRLAHQLGLLVILRPGPYICAEWDMGGLPAWLLEKESIV 451
N+HEP PG Y F G D+ F+ A LLVILRPGPYICAEW+MGGLP+WLL K I
Sbjct: 85 NYHEPQPGVYNFNGSRDLIAFLNEAALANLLVILRPGPYICAEWEMGGLPSWLLRKPEIH 144
Query: 452 LRSSHPDYLAAVDKWLGVLLPKMKPLLYQNGGPIITVQVENEYGSYYSCDYNYLRFLQKR 631
LR+S PD+LAAVD W VLLPK+ P LY NGG II++QVENEYGSY +CD++Y+R L
Sbjct: 145 LRTSDPDFLAAVDSWFKVLLPKIYPWLYHNGGNIISIQVENEYGSYRACDFSYMRHLAGL 204
Query: 632 FHYYLGEDVVLFTTDGAHEKFLACGTLEGLYATVDFGVDANITAAFLMQRKYEPRGPLIN 811
F LGE ++LFTTDG + L CG+L GLY TVDFG N+T F + RKYEP GPL+N
Sbjct: 205 FRALLGEKILLFTTDG--PEGLKCGSLRGLYTTVDFGPADNMTKIFTLLRKYEPHGPLVN 262
Query: 812 SEFYTGWLDHWGQPHSTVKTQVVASFLHDILALGANVNMYMFIGGTNFAYWNGANTP--Y 985
SE+YTGWLD+WGQ HST V L ++L LGA+VNMYMF GGTNF YWNGA+ +
Sbjct: 263 SEYYTGWLDYWGQNHSTRSVSAVTKGLENMLKLGASVNMYMFHGGTNFGYWNGADKKGRF 322
Query: 986 QPQPTSYDYDAPLSEAGDLTEKYFALRDVIQKFKKVPEGLIPPSTPKFAYGKVALKKLKT 1165
P TSYDYDAP+SEAGD T K FALRDVI KF++VP G +PP +PK G V L +
Sbjct: 323 LPITTSYDYDAPISEAGDPTPKLFALRDVISKFQEVPLGPLPPPSPKMMLGPVTLHLVGH 382
Query: 1166 VVEALDILCPSGPIKSFYPLTFIQVKQYFGFVLYRTTLPKDCKDPTHLSSPFNGVHDRAY 1345
++ LD+LCP GPI S P+TF VKQ GF+LYRT + +PT P NGVHDRAY
Sbjct: 383 LLAFLDLLCPRGPIHSILPMTFEAVKQDHGFMLYRTYMTHTIFEPTPFWVPNNGVHDRAY 442
Query: 1346 VSVDGVPQGVLERNIVITLNITGKAGATLDLLVENMGRVNYGNSINDFKGLISNLTLGSS 1525
V VDGV QGV+ERN+ L +TGK G+ LD+LVENMGR+++G++ +DFKGL+ LG +
Sbjct: 443 VMVDGVFQGVVERNMRDKLFLTGKLGSKLDILVENMGRLSFGSNSSDFKGLLKPPILGQT 502
Query: 1526 ILTDWQIFPMDTEDAVRRY----LGAWHGYGGKGHHEAHTHSPSEYTLPAFYVANFSIPS 1693
ILT W +FP+ ++ V+ + L W + +PS P FY F I
Sbjct: 503 ILTQWMMFPLKIDNLVKWWFPLQLPKW----------PYPQAPSG---PTFYSKTFPILG 549
Query: 1694 EIPDLPQDTFIQFPGWTKGQVWINGFNLGRYWPARGPQKTLFVPQHILV-TSAPNTIIVL 1870
+ DTF+ PGWTKGQVWINGFNLGRYW +GPQ+TL+VP+ +L A N I +L
Sbjct: 550 SV----GDTFLYLPGWTKGQVWINGFNLGRYWTKQGPQQTLYVPRFLLFPRGALNKITLL 605
Query: 1871 ELEHAPCGDKEPCTVEFVDKPLIGATET 1954
ELE P + V+F+DKP++ +T T
Sbjct: 606 ELEDVPLQPQ----VQFLDKPILNSTST 629
>ref|NP_612351.2| beta-galactosidase-1-like protein 2 precursor [Homo sapiens].
Length = 636
Score = 382 bits (980), Expect = e-105
Identities = 234/589 (39%), Positives = 330/589 (56%), Gaps = 9/589 (1%)
Frame = +2
Query: 134 FLKDGQPFRYISGSIHYFRMPRFYWKDRLLKMKMAGLNAIETYVAWNFHEPWPGKYQFTG 313
F+ + F GSIHYFR+PR YW+DRLLKMK GLN + TYV WN HEP GK+ F+G
Sbjct: 54 FMLEDSTFWIFGGSIHYFRVPREYWRDRLLKMKACGLNTLTTYVPWNLHEPERGKFDFSG 113
Query: 314 DHDVEYFIRLAHQLGLLVILRPGPYICAEWDMGGLPAWLLEKESIVLRSSHPDYLAAVDK 493
+ D+E F+ +A ++GL VILRPGPYIC+E D+GGLP+WLL+ + LR+++ + AVD
Sbjct: 114 NLDLEAFVLMAAEIGLWVILRPGPYICSEMDLGGLPSWLLQDPGMRLRTTYKGFTEAVDL 173
Query: 494 WLGVLLPKMKPLLYQNGGPIITVQVENEYGSYYSCDYNYLRFLQKRFHYYLGEDVVLFTT 673
+ L+ ++ PL Y+ GGPII VQVENEYGS Y+ D Y+ +++K G +L T+
Sbjct: 174 YFDHLMSRVVPLQYKRGGPIIAVQVENEYGS-YNKDPAYMPYVKKALE-DRGIVELLLTS 231
Query: 674 DGAHEKFLACGTLEGLYATVDFGVDANITAAFLMQRKYEPRGPLINSEFYTGWLDHWGQP 853
D ++ L+ G ++G+ AT++ + + P + E++TGW D WG P
Sbjct: 232 D--NKDGLSKGIVQGVLATINLQSTHELQLLTTFLFNVQGTQPKMVMEYWTGWFDSWGGP 289
Query: 854 HSTVKTQVVASFLHDILALGANVNMYMFIGGTNFAYWNGAN--TPYQPQPTSYDYDAPLS 1027
H+ + + V + I+ G+++N+YMF GGTNF + NGA Y+ TSYDYDA L+
Sbjct: 290 HNILDSSEVLKTVSAIVDAGSSINLYMFHGGTNFGFMNGAMHFHDYKSDVTSYDYDAVLT 349
Query: 1028 EAGDLTEKYFALRDVIQKFKKVPEGLIPPSTPKFAYGKVALKKLKTVVEALDILCPSGPI 1207
EAGD T KY LRD +P P PK Y + ++ +AL L PI
Sbjct: 350 EAGDYTAKYMKLRDFFGSISGIPLPPPPDLLPKMPYEPLTPVLYLSLWDALKYL--GEPI 407
Query: 1208 KSFYPLTFIQVK------QYFGFVLYRTTLPKDCKDPTHLSSPFNGVHDRAYVSVDGVPQ 1369
KS P+ + Q FG++LY T++ H VHDR V V+ V
Sbjct: 408 KSEKPINMENLPVNGGNGQSFGYILYETSITSSGILSGH-------VHDRGQVFVNTVSI 460
Query: 1370 GVLERNIVITLNITGKAGATLDLLVENMGRVNYGNSIND-FKGLISNLTLGSSILTDWQI 1546
G L+ + L +LVEN GRVNYG +I+D KGLI NL L S L +++I
Sbjct: 461 GFLDYKTTKIAVPLIQGYTVLRILVENRGRVNYGENIDDQRKGLIGNLYLNDSPLKNFRI 520
Query: 1547 FPMDTEDAVRRYLGAWHGYGGKGHHEAHTHSPSEYTLPAFYVANFSIPSEIPDLPQDTFI 1726
+ +D + + + G + + P TLPAF++ + SI S P DTF+
Sbjct: 521 YSLDMKKSFFQRFGL----------DKWSSLPETPTLPAFFLGSLSISS----TPCDTFL 566
Query: 1727 QFPGWTKGQVWINGFNLGRYWPARGPQKTLFVPQHILVTSAPNTIIVLE 1873
+ GW KG V+ING NLGRYW GPQKTL++P L +S N +IV E
Sbjct: 567 KLEGWEKGVVFINGQNLGRYWNI-GPQKTLYLPGPWL-SSGINQVIVFE 613
>ref|NP_001073876.2| beta-galactosidase-1-like protein 3 [Homo sapiens].
Length = 653
Score = 337 bits (864), Expect = 3e-92
Identities = 214/592 (36%), Positives = 311/592 (52%), Gaps = 12/592 (2%)
Frame = +2
Query: 134 FLKDGQPFRYISGSIHYFRMPRFYWKDRLLKMKMAGLNAIETYVAWNFHEPWPGKYQFTG 313
F +G F GSIHYFR+PR YW+DRLLK+K G N + TYV WN HEP GK+ F+G
Sbjct: 80 FTLEGHKFLIFGGSIHYFRVPREYWRDRLLKLKACGFNTVTTYVPWNLHEPERGKFDFSG 139
Query: 314 DHDVEYFIRLAHQLGLLVILRPGPYICAEWDMGGLPAWLLEKESIVLRSSHPDYLAAVDK 493
+ D+E F+ +A ++GL VILRPG YIC+E D+GGLP+WLL+ ++LR+++ ++ AV+K
Sbjct: 140 NLDLEAFVLMAAEIGLWVILRPGRYICSEMDLGGLPSWLLQDPRLLLRTTNKSFIEAVEK 199
Query: 494 WLGVLLPKMKPLLYQNGGPIITVQVENEYGSYYSCDYNYLRFLQKRFHYYLGEDVVLFTT 673
+ L+P++ PL Y+ GP+I VQVENEYGS ++ D Y+ +L K G +L T+
Sbjct: 200 YFDHLIPRVIPLQYRQAGPVIAVQVENEYGS-FNKDKTYMPYLHKAL-LRRGIVELLLTS 257
Query: 674 DGAHEKFLACGTLEGLYATVDFGVDANITAAFLMQRKYEPRGPLINSEFYTGWLDHWGQP 853
DG EK + G +G+ A ++ T F K + PL+ E++ GW D WG
Sbjct: 258 DG--EKHVLSGHTKGVLAAINLQKLHQDT--FNQLHKVQRDKPLLIMEYWVGWFDRWGDK 313
Query: 854 HSTVKTQVVASFLHDILALGANVNMYMFIGGTNFAYWNGAN--TPYQPQPTSYDYDAPLS 1027
H + V + + + + N+YMF GGTNF + NGA + TSYDYDA L+
Sbjct: 314 HHVKDAKEVEHAVSEFIKYEISFNVYMFHGGTNFGFMNGATYFGKHSGIVTSYDYDAVLT 373
Query: 1028 EAGDLTEKYFALRDVIQKFKKVPEGLIPPSTPKFAYGKVALKKLKTVVEALDILCPSGPI 1207
EAGD TEKY L+ + Q P +P PK Y V + +AL L + P+
Sbjct: 374 EAGDYTEKYLKLQKLFQSVSATPLPRVPKLPPKAVYPPVRPSLYLPLWDALSYL--NEPV 431
Query: 1208 KSFYPLTFIQVK------QYFGFVLYRTTLPKDCKDPTHLSSPFNGVHDRAYVSVDGVPQ 1369
+S P+ + Q +G VLY ++ + H HD A V +D
Sbjct: 432 RSRQPVNMENLPINNGSGQSYGLVLYEKSICSGGRLRAH-------AHDVAQVFLDETMI 484
Query: 1370 GVLERNIVITLNITGKAGATLDLLVENMGRVNYGNSI-NDFKGLISNLTLGSSILTDWQI 1546
G+L N + L +LVEN GRVN+ I N+ KG+ ++++ +S L + I
Sbjct: 485 GILNENNKDLHIPELRDCRYLRILVENQGRVNFSWQIQNEQKGITGSVSINNSSLEGFTI 544
Query: 1547 FPMDTEDAV--RRYLGAWHGYGGKGHHEAHTHSPSEYTLPAFYVANFSI-PSEIPDLPQD 1717
+ ++ + + R W P + PAFY PS P+D
Sbjct: 545 YSLEMKMSFFERLRSATWKPV------------PDSHQGPAFYCGTLKAGPS-----PKD 587
Query: 1718 TFIQFPGWTKGQVWINGFNLGRYWPARGPQKTLFVPQHILVTSAPNTIIVLE 1873
TF+ W G V+ING NLGRYW GPQKTL++P + + N +I+ E
Sbjct: 588 TFLSLLNWNYGFVFINGRNLGRYWNI-GPQKTLYLP-GVWLHPEDNEVILFE 637
Database: RefSeq49_HP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,297,164
Number of sequences in database: 32,964
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 32964
Number of Hits to DB: 102,031,029
Number of extensions: 3008263
Number of successful extensions: 9330
Number of sequences better than 1.0e-05: 6
Number of HSP's gapped: 9301
Number of HSP's successfully gapped: 8
Length of query: 778
Length of database: 18,297,164
Length adjustment: 110
Effective length of query: 668
Effective length of database: 14,671,124
Effective search space: 9800310832
Effective search space used: 9800310832
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to RefSeqMP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AMP01_0068_C04
(2336 letters)
Database: RefSeq49_MP.fasta
30,036 sequences; 15,617,559 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_033882.1| beta-galactosidase precursor [Mus musculus]. 1010 0.0
Alignment gi|NP_083286.1| beta-galactosidase-1-like protein precursor [Mu... 660 0.0
Alignment gi|NP_722498.1| beta-galactosidase-1-like protein 2 [Mus muscul... 373 e-103
Alignment gi|NP_001106794.1| beta-galactosidase-1-like protein 3 [Mus mus... 357 2e-98
Alignment gi|NP_001170980.1| beta-galactosidase-like protein [Mus musculu... 304 2e-82
>ref|NP_033882.1| beta-galactosidase precursor [Mus musculus].
Length = 647
Score = 1010 bits (2611), Expect = 0.0
Identities = 480/625 (76%), Positives = 543/625 (86%), Gaps = 8/625 (1%)
Frame = +2
Query: 89 NAPLRTFKIDYNRNCFLKDGQPFRYISGSIHYFRMPRFYWKDRLLKMKMAGLNAIETYVA 268
N RTFK+DY+R+ FLKDGQPFRYISGSIHYFR+PRFYW+DRLLKMKMAGLNAI+ YV
Sbjct: 27 NVTQRTFKLDYSRDRFLKDGQPFRYISGSIHYFRIPRFYWEDRLLKMKMAGLNAIQMYVP 86
Query: 269 WNFHEPWPGKYQFTGDHDVEYFIRLAHQLGLLVILRPGPYICAEWDMGGLPAWLLEKESI 448
WNFHEP PG+Y+F+GD DVE+FI+LAH+LGLLVILRPGPYICAEWDMGGLPAWLLEK+SI
Sbjct: 87 WNFHEPQPGQYEFSGDRDVEHFIQLAHELGLLVILRPGPYICAEWDMGGLPAWLLEKQSI 146
Query: 449 VLRSSHPDYLAAVDKWLGVLLPKMKPLLYQNGGPIITVQVENEYGSYYSCDYNYLRFLQK 628
VLRSS PDYL AVDKWL VLLPKMKPLLYQNGGPIITVQVENEYGSY++CDY+YLRFL
Sbjct: 147 VLRSSDPDYLVAVDKWLAVLLPKMKPLLYQNGGPIITVQVENEYGSYFACDYDYLRFLVH 206
Query: 629 RFHYYLGEDVVLFTTDGAHEKFLACGTLEGLYATVDFGVDANITAAFLMQRKYEPRGPLI 808
RF Y+LG DV+LFTTDGA EK L CGTL+ LYATVDFG NIT AFL+QRK+EP+GPLI
Sbjct: 207 RFRYHLGNDVILFTTDGASEKMLKCGTLQDLYATVDFGTGNNITQAFLVQRKFEPKGPLI 266
Query: 809 NSEFYTGWLDHWGQPHSTVKTQVVASFLHDILALGANVNMYMFIGGTNFAYWNGANTPYQ 988
NSEFYTGWLDHWG+PHSTVKT+ +A+ L+++LA GANVN+YMFIGGTNFAYWNGANTPY+
Sbjct: 267 NSEFYTGWLDHWGKPHSTVKTKTLATSLYNLLARGANVNLYMFIGGTNFAYWNGANTPYE 326
Query: 989 PQPTSYDYDAPLSEAGDLTEKYFALRDVIQKFKKVPEGLIPPSTPKFAYGKVALKKLKTV 1168
PQPTSYDYDAPLSEAGDLT+KYFALR+VIQ FK+VPEG IPPSTPKFAYGKVAL+K KTV
Sbjct: 327 PQPTSYDYDAPLSEAGDLTKKYFALREVIQMFKEVPEGPIPPSTPKFAYGKVALRKFKTV 386
Query: 1169 VEALDILCPSGPIKSFYPLTFIQVKQYFGFVLYRTTLPKDCKDPTHL-SSPFNGVHDRAY 1345
EAL ILCP+GP+KS YPLTF QVKQYFG+VLYRTTLP+DC +P + SSPFNGV DRAY
Sbjct: 387 AEALGILCPNGPVKSLYPLTFTQVKQYFGYVLYRTTLPQDCSNPKPIFSSPFNGVRDRAY 446
Query: 1346 VSVDGVPQGVLERNIVITLNITGKAGATLDLLVENMGRVNYGNSINDFKGLISNLTLGSS 1525
VSVDGVPQG+L+RN++ LNI GKAGATLD+LVENMGRVNYG INDFKGLISN+T+ S+
Sbjct: 447 VSVDGVPQGILDRNLMTALNIRGKAGATLDILVENMGRVNYGRFINDFKGLISNMTINST 506
Query: 1526 ILTDWQIFPMDTEDAVRRYLGAWHGYGGKGHHEAH-----THSPSEYTLPAFYVANFSIP 1690
+LT+W +FP++TE VR +L +G + E H T + S+ LP FYV NFSIP
Sbjct: 507 VLTNWTVFPLNTEAMVRNHL-----WGREASDEGHLDGRSTSNSSDLILPTFYVGNFSIP 561
Query: 1691 SEIPDLPQDTFIQFPGWTKGQVWINGFNLGRYWPARGPQKTLFVPQHILVTSAPNTIIVL 1870
S IPDLPQDTFIQFPGW+KGQVWINGFNLGRYWP GPQKTLFVP++IL TSAPN I VL
Sbjct: 562 SGIPDLPQDTFIQFPGWSKGQVWINGFNLGRYWPTMGPQKTLFVPRNILTTSAPNNITVL 621
Query: 1871 ELEHAPC--GDKEPCTVEFVDKPLI 1939
ELE APC G E CTVEFVD P+I
Sbjct: 622 ELEFAPCSEGTPELCTVEFVDTPVI 646
>ref|NP_083286.1| beta-galactosidase-1-like protein precursor [Mus musculus].
Length = 646
Score = 660 bits (1704), Expect = 0.0
Identities = 327/626 (52%), Positives = 425/626 (67%), Gaps = 2/626 (0%)
Frame = +2
Query: 92 APLRTFKIDYNRNCFLKDGQPFRYISGSIHYFRMPRFYWKDRLLKMKMAGLNAIETYVAW 271
A R+F +D + FL DG PFRY+SGS+HYFR+P W DRLLKM+++GLNA++ YV W
Sbjct: 21 AEARSFVVDREHDRFLLDGVPFRYVSGSLHYFRVPPVLWADRLLKMQLSGLNAVQFYVPW 80
Query: 272 NFHEPWPGKYQFTGDHDVEYFIRLAHQLGLLVILRPGPYICAEWDMGGLPAWLLEKESIV 451
N+HEP PG Y F G D+ F+ A ++ LLVILRPGPYICAEW+MGGLP+WLL +I
Sbjct: 81 NYHEPEPGIYNFNGSRDLIAFLNEAAKVNLLVILRPGPYICAEWEMGGLPSWLLRNPNIH 140
Query: 452 LRSSHPDYLAAVDKWLGVLLPKMKPLLYQNGGPIITVQVENEYGSYYSCDYNYLRFLQKR 631
LR+S P +L AVD W VLLPK+ P LY NGG II++QVENEYGSY +CD+ Y+R L
Sbjct: 141 LRTSDPAFLEAVDSWFKVLLPKIYPFLYHNGGNIISIQVENEYGSYKACDFKYMRHLAGL 200
Query: 632 FHYYLGEDVVLFTTDGAHEKFLACGTLEGLYATVDFGVDANITAAFLMQRKYEPRGPLIN 811
F LG+ ++LFTTDG H L CG+L+GLY T+DFG N+T F + R+YEP GPL+N
Sbjct: 201 FRALLGDKILLFTTDGPHG--LRCGSLQGLYTTIDFGPADNVTRIFSLLREYEPHGPLVN 258
Query: 812 SEFYTGWLDHWGQPHSTVKTQVVASFLHDILALGANVNMYMFIGGTNFAYWNGANTP--Y 985
SE+YTGWLD+WGQ HST + VA L +L LGA+VNMYMF GGTNF YWNGA+ +
Sbjct: 259 SEYYTGWLDYWGQNHSTRSSPAVAQGLEKMLKLGASVNMYMFHGGTNFGYWNGADEKGRF 318
Query: 986 QPQPTSYDYDAPLSEAGDLTEKYFALRDVIQKFKKVPEGLIPPSTPKFAYGKVALKKLKT 1165
P TSYDYDAP+SEAGD T K FA+R+VI KF+++P G +PP +PK +G + +
Sbjct: 319 LPITTSYDYDAPISEAGDPTPKLFAIRNVISKFQEIPLGPLPPPSPKMKFGPLTMSLDGN 378
Query: 1166 VVEALDILCPSGPIKSFYPLTFIQVKQYFGFVLYRTTLPKDCKDPTHLSSPFNGVHDRAY 1345
++ LD LCP GPI S PLTF VK GF+LYRT L +PT P NG+HDRAY
Sbjct: 379 LLSFLDFLCPQGPIHSVLPLTFEAVKLDHGFMLYRTYLTSPVLEPTPFWVPNNGIHDRAY 438
Query: 1346 VSVDGVPQGVLERNIVITLNITGKAGATLDLLVENMGRVNYGNSINDFKGLISNLTLGSS 1525
V VDGV +GVLER++ L +TG G LD+L+ENMGR+++G++ +DFKGL+ LG +
Sbjct: 439 VMVDGVLKGVLERSLKQELYLTGTVGTRLDILLENMGRLSFGSNHSDFKGLLEAPLLGQT 498
Query: 1526 ILTDWQIFPMDTEDAVRRYLGAWHGYGGKGHHEAHTHSPSEYTLPAFYVANFSIPSEIPD 1705
ILT+W +FP+ + V+ + P ++PAFY A F +
Sbjct: 499 ILTEWMMFPLKVDKLVKWWFPL---------QLMKRALPQASSVPAFYSAKFPVFG---- 545
Query: 1706 LPQDTFIQFPGWTKGQVWINGFNLGRYWPARGPQKTLFVPQHILVTSAPNTIIVLELEHA 1885
L DTF+ PGWTKGQVWINGFNLGRYW RGPQ+TL+VP+ +L + N I +LELE+
Sbjct: 546 LLGDTFLYLPGWTKGQVWINGFNLGRYWTMRGPQQTLYVPRLLLFGRSINKITLLELENV 605
Query: 1886 PCGDKEPCTVEFVDKPLIGATETWSH 1963
P + V+F+DKP++ +T W +
Sbjct: 606 PHNPQ----VQFLDKPILNSTLHWGY 627
>ref|NP_722498.1| beta-galactosidase-1-like protein 2 [Mus musculus].
Length = 652
Score = 373 bits (958), Expect = e-103
Identities = 228/593 (38%), Positives = 342/593 (57%), Gaps = 13/593 (2%)
Frame = +2
Query: 134 FLKDGQPFRYISGSIHYFRMPRFYWKDRLLKMKMAGLNAIETYVAWNFHEPWPGKYQFTG 313
F+ + F+ + GSIHYFR+PR YW+DRLLK+K GLN + TYV WN HEP GK+ F+G
Sbjct: 70 FILEDSIFQILGGSIHYFRVPREYWRDRLLKLKACGLNTLTTYVPWNLHEPERGKFDFSG 129
Query: 314 DHDVEYFIRLAHQLGLLVILRPGPYICAEWDMGGLPAWLLEKESIVLRSSHPDYLAAVDK 493
+ D+E FI+LA ++GL VILRPGPYIC+E D+GGLP+WLL+ + LR+++ + AVD
Sbjct: 130 NLDLEAFIQLAAKIGLWVILRPGPYICSEIDLGGLPSWLLQDPDMKLRTTYHGFTKAVDL 189
Query: 494 WLGVLLPKMKPLLYQNGGPIITVQVENEYGSYYSCDYNYLRFLQKRFHYYLGEDVVLFTT 673
+ L+ ++ PL Y++GGPII VQVENEYGS Y+ D Y+ +++K G +L T+
Sbjct: 190 YFDHLMSRVVPLQYKHGGPIIAVQVENEYGS-YNKDRAYMPYIKKALE-DRGIIEMLLTS 247
Query: 674 DGAHEKFLACGTLEGLYATVDFGVDANITAAFLMQRKYEPRGPLINSEFYTGWLDHWGQP 853
D ++ L G ++G+ AT++ + A + + P + E++TGW D WG
Sbjct: 248 D--NKDGLEKGVVDGVLATINLQSQQELMALNTVLLSIQGIQPKMVMEYWTGWFDSWGGS 305
Query: 854 HSTVKTQVVASFLHDILALGANVNMYMFIGGTNFAYWNGAN--TPYQPQPTSYDYDAPLS 1027
H+ + + V + I+ G+++N+YMF GGTNF + NGA Y+ TSYDYDA L+
Sbjct: 306 HNILDSSEVLQTVSAIIKDGSSINLYMFHGGTNFGFINGAMHFNDYKADVTSYDYDAILT 365
Query: 1028 EAGDLTEKYFALRDVIQKFKKVPEGLIPPSTPKFAYGKVALKKLKTVVEALDILCPSGPI 1207
EAGD T KY LR++ +P P T K Y ++ ++ +A+ + P+
Sbjct: 366 EAGDYTAKYTKLRELFGTVSGIPPPPPPELTAKMVYEPMSPALYLSLWDAIQYM--DKPV 423
Query: 1208 KSFYPLTFIQVK------QYFGFVLYRTTLPKDCKDPTHLSSPFNG-VHDRAYVSVDGVP 1366
S P+ + Q FG+VLY TT+ S +G V DR V ++ V
Sbjct: 424 TSETPINMENLPVNNGNGQAFGYVLYETTI--------FSSGVLSGLVRDRGQVFLNRVS 475
Query: 1367 QGVLE-RNIVITLNITGKAGATLDLLVENMGRVNYGNSI-NDFKGLISNLTLGSSILTDW 1540
G L+ + IT+ +T + L +LVEN GRVNYGN+I + KGLI NL L + L ++
Sbjct: 476 IGFLDYKTTKITIPLT-QGYTILRILVENRGRVNYGNNIDSQRKGLIGNLYLNNKALKNF 534
Query: 1541 QIFPMD-TEDAVRRY-LGAWHGYGGKGHHEAHTHSPSEYTLPAFYVANFSIPSEIPDLPQ 1714
+I+ +D T+ ++R+ + W + P E T PAF++ S+ P
Sbjct: 535 KIYSLDMTKQFLQRFDMDNW------------SVIPKELTFPAFFLGALSVGI----YPS 578
Query: 1715 DTFIQFPGWTKGQVWINGFNLGRYWPARGPQKTLFVPQHILVTSAPNTIIVLE 1873
DTF++ GW KG V++NG NLGRYW GPQ+TL++P + + N +I+ E
Sbjct: 579 DTFLKLEGWVKGVVFVNGHNLGRYWNV-GPQETLYLP-GVWLDKGINKVIIFE 629
>ref|NP_001106794.1| beta-galactosidase-1-like protein 3 [Mus musculus].
Length = 662
Score = 357 bits (917), Expect = 2e-98
Identities = 221/591 (37%), Positives = 317/591 (53%), Gaps = 11/591 (1%)
Frame = +2
Query: 134 FLKDGQPFRYISGSIHYFRMPRFYWKDRLLKMKMAGLNAIETYVAWNFHEPWPGKYQFTG 313
F +G F + GSIHYFR+PR YWKDRLLK++ G N + TY+ WN HE GK+ F+
Sbjct: 69 FTLEGHKFMIVGGSIHYFRVPREYWKDRLLKLQACGFNTVTTYIPWNLHEQERGKFDFSE 128
Query: 314 DHDVEYFIRLAHQLGLLVILRPGPYICAEWDMGGLPAWLLEKESIVLRSSHPDYLAAVDK 493
D+E ++ LA +GL VILRPGPYICAE D+GGLP+WLL LR+++ ++ AVDK
Sbjct: 129 ILDLEAYVLLAKTIGLWVILRPGPYICAEVDLGGLPSWLLRNPVTDLRTTNKGFIEAVDK 188
Query: 494 WLGVLLPKMKPLLYQNGGPIITVQVENEYGSYYSCDYNYLRFLQKRFHYYLGEDVVLFTT 673
+ L+PK+ PL Y++GGP+I VQVENEYGS+ D NY+ +L+K L +V
Sbjct: 189 YFDHLIPKILPLQYRHGGPVIAVQVENEYGSFQK-DRNYMNYLKKAL---LKRGIVELLL 244
Query: 674 DGAHEKFLACGTLEGLYATVDFGVDANITAAFLMQRKYEPRGPLINSEFYTGWLDHWGQP 853
+ + G++ G T++ +++ +F+ K + P++ E++TGW D WG
Sbjct: 245 TSDDKDGIQIGSVNGALTTIN--MNSFTKDSFIKLHKMQSDKPIMIMEYWTGWYDSWGSK 302
Query: 854 HSTVKTQVVASFLHDILALGANVNMYMFIGGTNFAYWNGA--NTPYQPQPTSYDYDAPLS 1027
H + + ++ ++ G + NMYMF GGTNF + NG + TSYDYDA LS
Sbjct: 303 HIEKSAEEIRHTVYKFISYGLSFNMYMFHGGTNFGFINGGRYENHHISVVTSYDYDAVLS 362
Query: 1028 EAGDLTEKYFALRDVIQKFKKVPEGLIPPSTPKFAYGKVALKKLKTVVEALDILCPSGPI 1207
EAGD TEKYF LR + P +PP PK Y V L + + L L + P+
Sbjct: 363 EAGDYTEKYFKLRKLFASGSARPLPPLPPLIPKAIYPSVNLSFYLPLFDILPYL--NQPV 420
Query: 1208 KSFYPLTFIQVK------QYFGFVLYRTTLPKDCKDPTHLSSPFNGVHDRAYVSVDGVPQ 1369
P+T + Q FG VLY T++ C S F VHD A V ++
Sbjct: 421 MLHTPVTMENLPINNGSGQPFGLVLYETSI---CSG----GSLFASVHDSAQVFLNDQSI 473
Query: 1370 GVLERNIVITLNITGKAGATLDLLVENMGRVNYGNSI-NDFKGLISNLTLGSSILTDWQI 1546
G+L+ N + + L +LVEN GR+NY I ++ KGL +++ +LT++ I
Sbjct: 474 GILDENHEVLQIPKIQGCQLLRILVENQGRINYSWRIQSEQKGLKEVVSIDGLLLTNFTI 533
Query: 1547 FPMDTEDAVRRYL--GAWHGYGGKGHHEAHTHSPSEYTLPAFYVANFSIPSEIPDLPQDT 1720
+ +D + + + L +W +P Y PAFY + S P DT
Sbjct: 534 YSLDMKMSFFKRLRSASWR------------LAPKTYNGPAFYWGILNAGSS----PTDT 577
Query: 1721 FIQFPGWTKGQVWINGFNLGRYWPARGPQKTLFVPQHILVTSAPNTIIVLE 1873
F+ P W G V+ING NLGRYW GPQ+TL++P L N +IV E
Sbjct: 578 FLHLPNWHYGFVFINGRNLGRYWDI-GPQRTLYLPGPWL-HPEDNEVIVFE 626
>ref|NP_001170980.1| beta-galactosidase-like protein [Mus musculus].
Length = 638
Score = 304 bits (778), Expect = 2e-82
Identities = 216/619 (34%), Positives = 319/619 (51%), Gaps = 16/619 (2%)
Frame = +2
Query: 134 FLKDGQPFRYISGSIHYFRMPRFYWKDRLLKMKMAGLNAIETYVAWNFHEPWPGKYQFTG 313
F +G PFR ISG+I YFR+PR W+ L KM+ G N + T++ WN HEP G++ FT
Sbjct: 56 FTLEGFPFRIISGTIDYFRIPRNSWRLSLRKMQAGGFNTLTTHIPWNLHEPAVGQFYFTE 115
Query: 314 DHDVEYFIRLAHQLGLLVILRPGPYICAEWDMGGLPAWLLEKESIVLRSSHPDYLAAVDK 493
+ D+ FI +A Q GL VIL PGPYI ++ D+GGLP+WLL+ + LR+++ + A+++
Sbjct: 116 NTDLIAFITMASQSGLWVILCPGPYIGSDLDLGGLPSWLLKDPKMKLRTTYKGFTKAMNR 175
Query: 494 WLGVLLPKMKPLLYQNGGPIITVQVENEYGSYYSCDYNYLRFLQKRFHYYLGEDVVLFTT 673
+ L+PK+ Y+ GGPII VQVENEYGSYY D Y+ ++ K G D +L T
Sbjct: 176 YFDNLIPKIAKFQYKKGGPIIAVQVENEYGSYY-MDKKYMAYV-KTALVSRGIDELLMTA 233
Query: 674 DGAHEKFLACGTLEGLYATVDFGVDANITAAFLMQRKYEPRGPLINSEFYTGWLDHWGQP 853
D L G LE + ATV T L R + + P++ + T D WG
Sbjct: 234 DDGVS--LRKGHLENVLATVHMKNIKKETFGDL--RSIQGKSPILMMVYTTKSFDTWGTL 289
Query: 854 HSTVKTQVVASFLHDILALGANVNMYMFIGGTNFAYWNGANTP--YQPQPTSYDYDAPLS 1027
H T Q++ +H++ LG ++N YMF GGTNF GA + Y+P TSYDY+A +S
Sbjct: 290 HQTGDAQMLLKDVHEMFHLGFSLNFYMFQGGTNFGLIGGAQSSEGYKPVVTSYDYNALVS 349
Query: 1028 EAGDLTEKYFALRDVIQKFKKVPEGLI--PPSTPKFAYGKVALKKLKTVVEALDILCPSG 1201
E G+ T +Y + L P +T FAY V L T+ E L L +
Sbjct: 350 EGGEYTVQYREFQRFFHSVTVADSHLTVQPKTTQMFAYQPVTLLYFMTLWEFLPNLVKT- 408
Query: 1202 PIKSFYPLTFIQVK------QYFGFVLYRTTLPKDCKDPTHLSSPFNGVHDRA-YVSVDG 1360
KS PL+ Q++ Q FG++LY T + L + + DR V +D
Sbjct: 409 -TKSSKPLSMEQLRVNERSGQSFGYILYETVIFSG-----GLITSRGHIRDRGQVVFLDN 462
Query: 1361 VPQGVLER--NIVITLNITGKAGATLDLLVENMGRVNYGNSIN-DFKGLISNLTLGSSIL 1531
+ G+L++ + ++ K L +LVEN GR+ G IN + KGL ++ L S L
Sbjct: 463 IYIGLLDQSNSELLLYKDVSKKSQILRILVENQGRLTSGQDINKERKGLTGDIYLDKSPL 522
Query: 1532 TDWQIFPMDTEDAV--RRYLGAWHGYGGKGHHEAHTHSPSEYTLPAFYVANFSIPSEIPD 1705
++I+ ++ + R + +W S+ PAF+++ + D
Sbjct: 523 RPFKIYSLEMNNIFIQREFPNSWQ------------RVTSQVQGPAFFLSYL----KAGD 566
Query: 1706 LPQDTFIQFPGWTKGQVWINGFNLGRYWPARGPQKTLFVPQHILVTSAPNTIIVLELEHA 1885
PQDTF++ GW KG + ING +LGRYW GPQ+T+FVP L I+ EL+
Sbjct: 567 PPQDTFMKIQGWGKGVISINGRSLGRYWNI-GPQETVFVPGSWLQPGVNKIIMFEELK-- 623
Query: 1886 PCGDKEPCTVEFVDKPLIG 1942
GD++ + F K +G
Sbjct: 624 --GDEK---IHFSTKAQLG 637
Database: RefSeq49_MP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 15,617,559
Number of sequences in database: 30,036
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 30036
Number of Hits to DB: 86,348,919
Number of extensions: 2524410
Number of successful extensions: 7755
Number of sequences better than 1.0e-05: 5
Number of HSP's gapped: 7727
Number of HSP's successfully gapped: 5
Length of query: 778
Length of database: 15,617,559
Length adjustment: 109
Effective length of query: 669
Effective length of database: 12,343,635
Effective search space: 8257891815
Effective search space used: 8257891815
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to RefSeqSP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AMP01_0068_C04
(2336 letters)
Database: RefSeq49_SP.fasta
24,897 sequences; 11,343,932 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_001928410.1| PREDICTED: beta-galactosidase-1-like protein... 660 0.0
Alignment gi|XP_003361222.1| PREDICTED: beta-galactosidase-like, partial ... 565 e-161
Alignment gi|XP_003130137.1| PREDICTED: beta-galactosidase-1-like protein... 374 e-103
Alignment gi|XP_003130139.2| PREDICTED: beta-galactosidase-1-like protein... 289 4e-78
>ref|XP_001928410.1| PREDICTED: beta-galactosidase-1-like protein [Sus scrofa].
Length = 652
Score = 660 bits (1704), Expect = 0.0
Identities = 341/641 (53%), Positives = 432/641 (67%), Gaps = 6/641 (0%)
Frame = +2
Query: 92 APLRTFKIDYNRNCFLKDGQPFRYISGSIHYFRMPRFYWKDRLLKMKMAGLNAIETYVAW 271
A R+F +D N + FL DG PFRY+SGS+HYFR+PR W DRL KM+M+GLNAI+ YV W
Sbjct: 25 ADTRSFVVDRNHDRFLLDGVPFRYVSGSLHYFRVPRVLWADRLFKMRMSGLNAIQFYVPW 84
Query: 272 NFHEPWPGKYQFTGDHDVEYFIRLAHQLGLLVILRPGPYICAEWDMGGLPAWLLEKESIV 451
N+HEP PG Y F G D+ F++ A LLVILRPGPYICAEW+MGGLPAWLL K I
Sbjct: 85 NYHEPEPGVYNFNGSRDLFAFLKEATLANLLVILRPGPYICAEWEMGGLPAWLLRKPKIH 144
Query: 452 LRSSHPDYLAAVDKWLGVLLPKMKPLLYQNGGPIITVQVENEYGSYYSCDYNYLRFLQKR 631
LR+S PD+LAAVD W VLLPK+ P LY NGG II++QVENEYGSY +CD Y+R L
Sbjct: 145 LRTSDPDFLAAVDSWFKVLLPKIYPWLYHNGGNIISIQVENEYGSYRACDVKYMRHLAGL 204
Query: 632 FHYYLGEDVVLFTTDGAHEKFLACGTLEGLYATVDFGVDANITAAFLMQRKYEPRGPLIN 811
F LG+ ++LFTTDG + L CG+L+GLY TVDFG N+T F + RKYEP GPL+N
Sbjct: 205 FRALLGDKILLFTTDG--PEGLKCGSLQGLYTTVDFGPADNMTKIFALLRKYEPHGPLVN 262
Query: 812 SEFYTGWLDHWGQPHSTVKTQVVASFLHDILALGANVNMYMFIGGTNFAYWNGANTP--Y 985
SE+YTGWLD+WGQ HST V L +L LGA+VNMYMF GGTNF YWNGA+ +
Sbjct: 263 SEYYTGWLDYWGQNHSTRSVPAVTKGLEKMLELGASVNMYMFHGGTNFGYWNGADEKGRF 322
Query: 986 QPQPTSYDYDAPLSEAGDLTEKYFALRDVIQKFKKVPEGLIPPSTPKFAYGKVALKKLKT 1165
P TSYDYDAP+SEAGD T K+ A+R+VI KF+++P G +PP +PK G + L+
Sbjct: 323 LPITTSYDYDAPISEAGDXTPKFXAIRNVISKFQEIPLGPLPPPSPKMMLGPLTLQLDGD 382
Query: 1166 VVEALDILCPSGPIKSFYPLTFIQVKQYFGFVLYRTTLPKDCKDPTHLSSPFNGVHDRAY 1345
++ LD LCP GPI S P+TF V Q GF+LYRT L +PT P NGVHDRAY
Sbjct: 383 LLAFLDFLCPQGPIHSILPMTFEAVNQDRGFMLYRTHLTHTVSEPTQFWVPNNGVHDRAY 442
Query: 1346 VSVDGVPQGVLERNIVITLNITGKAGATLDLLVENMGRVNYGNSINDFKGLISNLTLGSS 1525
V VDGV QGVLERN+ L + GK GA LD+L+ENMGR+++G++ +DFKGL+ LG +
Sbjct: 443 VMVDGVFQGVLERNMEHNLFLMGKRGAKLDVLLENMGRLSFGSNSSDFKGLLEPPILGQT 502
Query: 1526 ILTDWQIFPMDTEDAVRRYLGAWHGYGGKGHHEAHTHSPSEYTLPAFYVANFSIPSEIPD 1705
ILT W +FP+ ++ V+ + T P + P FY F + D
Sbjct: 503 ILTPWLMFPLKVDNLVKWWFPI---------QLLKTPHPQIPSGPTFYSTTF----PVFD 549
Query: 1706 LPQDTFIQFPGWTKGQVWINGFNLGRYWPARGPQKTLFVPQHILV-TSAPNTIIVLELEH 1882
DTF+ PGWTKGQVWINGFNLGRYW RGPQ+TL+VP+ +L A N I VLELE+
Sbjct: 550 SGGDTFLYLPGWTKGQVWINGFNLGRYWTKRGPQQTLYVPRPLLFPRGALNKITVLELEN 609
Query: 1883 APCGDKEPCTVEFVDKPLIGAT--ETWSH-VPQDQNRDSKP 1996
P +P ++F+D+P++ +T +T+ + + D DS+P
Sbjct: 610 VP---PQP-QIQFLDRPILNSTLHKTYIYSLSTDIQGDSEP 646
>ref|XP_003361222.1| PREDICTED: beta-galactosidase-like, partial [Sus scrofa].
Length = 332
Score = 565 bits (1457), Expect = e-161
Identities = 284/327 (86%), Positives = 292/327 (89%), Gaps = 13/327 (3%)
Frame = +2
Query: 806 INSEFYTGWLDHWGQPHSTVKTQVVASFLHDILALGANVNMYMFIGGTNFAYWNGANTPY 985
INSEFYTGWLDHWGQPHSTVKTQVVASFLHDILALGANVNMYMFIGGTNFAYWNGANTP+
Sbjct: 1 INSEFYTGWLDHWGQPHSTVKTQVVASFLHDILALGANVNMYMFIGGTNFAYWNGANTPH 60
Query: 986 QPQPTSYDYDAPLSEAGDLTEKYFALRDVIQKFKKVPEGLIPPSTPKFAYGKVALKKLKT 1165
QPQPTSYDYDAPLSEAGDLTEKYFALRDVIQKFKKVPEGLIPPSTPKFAYGKVALKKLKT
Sbjct: 61 QPQPTSYDYDAPLSEAGDLTEKYFALRDVIQKFKKVPEGLIPPSTPKFAYGKVALKKLKT 120
Query: 1166 VVEALDILCPSGPIKSFYPLTFIQVKQYFGFVLYRTTLP-KDCKDPTHLSSPFNGVH-DR 1339
VVEALDILCPSGPIKSFYPLTFIQVKQ +++ LP K P+ SP NG+H
Sbjct: 121 VVEALDILCPSGPIKSFYPLTFIQVKQR---AVHKMPLPQKPSWSPSPGPSPLNGLHVIH 177
Query: 1340 AYVSVDG-----------VPQGVLERNIVITLNITGKAGATLDLLVENMGRVNYGNSIND 1486
A+ G VPQGVLERNIVITLNITGKAGATLDLLVENMGRVNYGNSIND
Sbjct: 178 AFFPPGGQVNSHLALNPQVPQGVLERNIVITLNITGKAGATLDLLVENMGRVNYGNSIND 237
Query: 1487 FKGLISNLTLGSSILTDWQIFPMDTEDAVRRYLGAWHGYGGKGHHEAHTHSPSEYTLPAF 1666
FKGLISNLTLGSSILTDWQIFPMDTEDAVR +LGAWHGYGGKGHHEAHTHSPSEYTLPAF
Sbjct: 238 FKGLISNLTLGSSILTDWQIFPMDTEDAVRGHLGAWHGYGGKGHHEAHTHSPSEYTLPAF 297
Query: 1667 YVANFSIPSEIPDLPQDTFIQFPGWTK 1747
YVANFSIPSEIPDLPQDTFIQFPGWTK
Sbjct: 298 YVANFSIPSEIPDLPQDTFIQFPGWTK 324
>ref|XP_003130137.1| PREDICTED: beta-galactosidase-1-like protein 2 [Sus scrofa].
Length = 635
Score = 374 bits (961), Expect = e-103
Identities = 235/615 (38%), Positives = 337/615 (54%), Gaps = 12/615 (1%)
Frame = +2
Query: 134 FLKDGQPFRYISGSIHYFRMPRFYWKDRLLKMKMAGLNAIETYVAWNFHEPWPGKYQFTG 313
F+ + F GS+HYFR+PR YW+DRLLKMK GLN + TYV WN HEP GK+ F+G
Sbjct: 53 FMLEDSAFWIFGGSVHYFRVPRAYWRDRLLKMKACGLNTLTTYVPWNLHEPERGKFDFSG 112
Query: 314 DHDVEYFIRLAHQLGLLVILRPGPYICAEWDMGGLPAWLLEKESIVLRSSHPDYLAAVDK 493
+ D+E FI LA ++GL VILRPGPYIC+E D+GGLP+WLL+ S+ LR+++ + AVD
Sbjct: 113 NLDMEAFILLAAEVGLWVILRPGPYICSEIDLGGLPSWLLQDSSMKLRTTYEGFTKAVDL 172
Query: 494 WLGVLLPKMKPLLYQNGGPIITVQVENEYGSYYSCDYNYLRFLQKRFHYYLGEDVVLFTT 673
+ L+ ++ PL Y+NGGPII VQVENEYGS Y+ D Y+ +++K G +L T+
Sbjct: 173 YFDHLMARVVPLQYKNGGPIIAVQVENEYGS-YNKDPAYMPYIKKALE-DRGIVELLLTS 230
Query: 674 DGAHEKFLACGTLEGLYATVDFGVDANITAAFLMQRKYEPRGPLINSEFYTGWLDHWGQP 853
D +E L+ GT++G+ AT++ + + + P + E++TGW D WG P
Sbjct: 231 D--NEDGLSKGTVDGVLATINLQSQNELRLLHNFLQSVQGVRPKMVMEYWTGWFDSWGGP 288
Query: 854 HSTVKTQVVASFLHDILALGANVNMYMFIGGTNFAYWNGAN--TPYQPQPTSYDYDAPLS 1027
H + T V + I+ GA++N+YMF GGTNF + NGA Y TSYDYDA L+
Sbjct: 289 HHILDTSEVLRTVSAIIDAGASINLYMFHGGTNFGFINGAMHFQDYMSDVTSYDYDAVLT 348
Query: 1028 EAGDLTEKYFALRDVIQKFKKVPEGLIPPSTPKFAYGKVALKKLKTVVEALDILCPSGPI 1207
EAGD T KY LR++ L P PK Y V ++ +AL + P+
Sbjct: 349 EAGDYTPKYIRLRELFGSISGASLPLPPDLLPKVRYEPVVPAFYLSLWDALPYI--KEPV 406
Query: 1208 KSFYPLTFIQVK------QYFGFVLYRTTLPKDCKDPTHLSSPFNGVHDRAYVSVDGVPQ 1369
S P+ + Q FG+ LY TT+ + + S V DR V ++
Sbjct: 407 TSEKPVNMENLPINDGNGQSFGYTLYETTITS-----SGILSAL--VRDRGQVFLNTETI 459
Query: 1370 GVLE---RNIVITLNITGKAGATLDLLVENMGRVNYGNSI-NDFKGLISNLTLGSSILTD 1537
G L+ + I I L + L +LVEN GRVNYG +I N KGLI ++ L + L
Sbjct: 460 GFLDYKTKKIPIPLI---QGFTILRILVENCGRVNYGENIDNQRKGLIGDIYLNDTPLKK 516
Query: 1538 WQIFPMDTEDAVRRYLGAWHGYGGKGHHEAHTHSPSEYTLPAFYVANFSIPSEIPDLPQD 1717
++I+ +D + + + A E P TLPAF++ S+ S P D
Sbjct: 517 FKIYSLDMKKSFFQRFTA----------EKWDPVPGVPTLPAFFLGALSVTS----FPYD 562
Query: 1718 TFIQFPGWTKGQVWINGFNLGRYWPARGPQKTLFVPQHILVTSAPNTIIVLELEHAPCGD 1897
TF++ GW KG V++NG+NLGRYW GPQ+TL++P L I+ E+ P
Sbjct: 563 TFVKLEGWEKGVVFVNGYNLGRYWNI-GPQETLYLPGVWLNEGINQVIVFEEMMQGP--- 618
Query: 1898 KEPCTVEFVDKPLIG 1942
++F++ P +G
Sbjct: 619 ----VIQFMEMPYLG 629
>ref|XP_003130139.2| PREDICTED: beta-galactosidase-1-like protein 3, partial [Sus scrofa].
Length = 533
Score = 289 bits (740), Expect = 4e-78
Identities = 203/549 (36%), Positives = 287/549 (52%), Gaps = 11/549 (2%)
Frame = +2
Query: 260 YVAWNFHEPWPGKYQFTGDHDVEYFIRLAHQLGLLVILRPGPYICAEWDMGGLPAWLLEK 439
YV WN HEP GK+ F+G+ D+E FI LA ++GL VILRPGPYIC+E D+GGLP+ LL+
Sbjct: 1 YVPWNLHEPERGKFDFSGNLDMEAFILLAAEVGLWVILRPGPYICSEIDLGGLPSRLLQD 60
Query: 440 ESIVLRSSHPDYLAAVDKWLGVLLPKMKPLLYQNGGPIITVQVENEYGSYYSCDYNYLRF 619
+ LR+++ ++ AVD++L L+ ++ PL Y+ GGPII VQVENEYGS++ D Y+ +
Sbjct: 61 PTSQLRTTNHSFIEAVDEYLDHLIARVVPLQYRKGGPIIAVQVENEYGSFHK-DEAYMPY 119
Query: 620 LQKRFHYYLGEDVVLFTTDGAHEKFLACGTLEGLYATVDFGVDANITAAFLMQRKYEPRG 799
L K G +L T+D +E + G ++G+ ATV+ + + F + +
Sbjct: 120 LHKAL-LKRGIVELLLTSDNTNE--VLKGHIKGVLATVN--MKSFKEGEFKDLYQVQSNK 174
Query: 800 PLINSEFYTGWLDHWGQPHSTVKTQVVASFLHDILALGANVNMYMFIGGTNFAYWNGAN- 976
P++ EF+ GW D WG H+ V + + D + L + N+YMF GGTNF + NGA
Sbjct: 175 PILIMEFWVGWFDTWGNKHAVRDAIDVENTIFDFIRLEISFNVYMFHGGTNFGFMNGATY 234
Query: 977 -TPYQPQPTSYDYDAPLSEAGDLTEKYFALRDVIQKFKKVPEGLIPPSTPKFAYGKVALK 1153
++ TSYDYDA L+EAGD T K+F LR++ + P +P TPK Y V
Sbjct: 235 FEQHRGVVTSYDYDAVLTEAGDYTPKFFKLRELFKSIFVTPLPALPEPTPKAVYPLVRPS 294
Query: 1154 KLKTVVEALDILCPSGPIKSFYPLTFIQVK------QYFGFVLYRTTLPKDCKDPTHLSS 1315
+ +AL L + P+ S PL + Q +G VLY+TT+ C
Sbjct: 295 LYLPLWDALQYL--NSPVLSNVPLNMENLPINNGNGQSYGLVLYQTTI---CSG----GQ 345
Query: 1316 PFNGVHDRAYVSVDGVPQGVLE--RNIVITLNITGKAGATLDLLVENMGRVNYGNSI-ND 1486
D A V ++ G L R V IT L +LVEN GRVN+ I N
Sbjct: 346 LHANAQDMAQVFLNETNLGTLANGRQDVYIPRIT--ECQLLRILVENQGRVNFSWKIQNQ 403
Query: 1487 FKGLISNLTLGSSILTDWQIFPMDTEDAVRRYLGAWHGYGGKGHHEAHTHSPSEYTLPAF 1666
KGLI +T+ L + I+ ++ + + + L + H H PAF
Sbjct: 404 QKGLIGPVTINDIPLESFTIYSLELKMSFFKRLRSASWKPVPDGHLGH---------PAF 454
Query: 1667 YVANFSIPSEIPDLPQDTFIQFPGWTKGQVWINGFNLGRYWPARGPQKTLFVPQHILVTS 1846
Y+ S P DTF+ P W G V+ING NLGRYW GPQKTL++P L
Sbjct: 455 YLGTLKAGSS----PMDTFLTLPDWNYGFVFINGRNLGRYWNI-GPQKTLYLPGSWL-QP 508
Query: 1847 APNTIIVLE 1873
N II+ E
Sbjct: 509 EDNEIILFE 517
Database: RefSeq49_SP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 11,343,932
Number of sequences in database: 24,897
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 24897
Number of Hits to DB: 64,478,350
Number of extensions: 1953386
Number of successful extensions: 6007
Number of sequences better than 1.0e-05: 4
Number of HSP's gapped: 5987
Number of HSP's successfully gapped: 4
Length of query: 778
Length of database: 11,343,932
Length adjustment: 107
Effective length of query: 671
Effective length of database: 8,679,953
Effective search space: 5824248463
Effective search space used: 5824248463
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to Sscrofa10_2
BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AMP01_0068_C04
(2336 letters)
Database: Sscrofa_10.2.fasta
4582 sequences; 2,808,509,378 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|GL895559.1| Sus scrofa unplaced genomic scaffold chrU_scaffol... 789 0.0
gb|GL893784.1| Sus scrofa unplaced genomic scaffold chrU_scaffol... 496 e-137
gb|GL894277.1| Sus scrofa unplaced genomic scaffold chrU_scaffol... 353 3e-94
gb|GL893679.1| Sus scrofa unplaced genomic scaffold chrU_scaffol... 293 2e-76
gb|GL895089.1| Sus scrofa unplaced genomic scaffold chrU_scaffol... 236 4e-59
>gb|GL895559.1| Sus scrofa unplaced genomic scaffold chrU_scaffold4111
Length = 57015
Score = 789 bits (398), Expect = 0.0
Identities = 401/402 (99%)
Strand = Plus / Minus
Query: 1905 cgtgcactgtggagttcgtggacaagccgcttattggcgcaaccgagacctggagccatg 1964
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 49701 cgtgcactgtggagttcgtggacaagccgcttattggcgcaaccgagacctggagccatg 49642
Query: 1965 tccctcaagaccaaaaccgagactcaaagccaggccgcgtgtaatgacgatgactgtgac 2024
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 49641 tccctcaagaccaaaaccgagactcaaagccaggccgcgtgtaatgacgatgactgtgac 49582
Query: 2025 ccttcggaactgtagccttgcacatacctcgcataaccctcaggatgccagcattcactg 2084
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 49581 ccttcggaactgtagccttgcacatacctcgcataaccctcaggatgccggcattcactg 49522
Query: 2085 aggagttcgattggaaaacagatgagttgttttctcacccaaggatttcctgcagccttg 2144
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 49521 aggagttcgattggaaaacagatgagttgttttctcacccaaggatttcctgcagccttg 49462
Query: 2145 tggcacctgaggcacccctgtccactgcacagatgtggggtaggatggtggtagcccagc 2204
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 49461 tggcacctgaggcacccctgtccactgcacagatgtggggtaggatggtggtagcccagc 49402
Query: 2205 aatgcacagaagcctccaaagaattgaaatggaggctttaagggtgtttctaattttcac 2264
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 49401 aatgcacagaagcctccaaagaattgaaatggaggctttaagggtgtttctaattttcac 49342
Query: 2265 tttggaagaatcatgtctttttattaaataaaatttgtattc 2306
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 49341 tttggaagaatcatgtctttttattaaataaaatttgtattc 49300
Score = 281 bits (142), Expect = 8e-73
Identities = 142/142 (100%)
Strand = Plus / Minus
Query: 1746 agggtcaggtgtggataaatggttttaaccttggccgctattggccagctcgaggtcccc 1805
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 49943 agggtcaggtgtggataaatggttttaaccttggccgctattggccagctcgaggtcccc 49884
Query: 1806 agaagaccttatttgtgccgcagcacatcctggtgacctcggctccaaacaccatcatcg 1865
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 49883 agaagaccttatttgtgccgcagcacatcctggtgacctcggctccaaacaccatcatcg 49824
Query: 1866 tgctggagctggagcatgcacc 1887
||||||||||||||||||||||
Sbjct: 49823 tgctggagctggagcatgcacc 49802
>gb|GL893784.1| Sus scrofa unplaced genomic scaffold chrU_scaffold2514
Length = 30851
Score = 496 bits (250), Expect = e-137
Identities = 256/258 (99%)
Strand = Plus / Plus
Query: 1491 agggtcttatttctaacctgacccttggttccagtatcctcactgactggcagatcttcc 1550
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 25947 agggtcttatttctaacctgacccttggttccagtatcctcactgactggcagatcttcc 26006
Query: 1551 cgatggacactgaggatgcagttcgccgctaccttggggcctggcatggctatggtggca 1610
|||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||
Sbjct: 26007 cgatggacactgaggatgcagttcgcggccaccttggggcctggcatggctatggtggca 26066
Query: 1611 agggccaccatgaagcccatacccacagcccatctgagtacacactgccagccttttatg 1670
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 26067 agggccaccatgaagcccatacccacagcccatctgagtacacactgccagccttttatg 26126
Query: 1671 tggctaacttctctattcccagtgagatcccagacttgccccaggacacctttatccagt 1730
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 26127 tggctaacttctctattcccagtgagatcccagacttgccccaggacacctttatccagt 26186
Query: 1731 ttcctggatggaccaagg 1748
||||||||||||||||||
Sbjct: 26187 ttcctggatggaccaagg 26204
Score = 266 bits (134), Expect = 5e-68
Identities = 134/134 (100%)
Strand = Plus / Plus
Query: 1360 ggtcccccagggagtccttgagcgaaatattgtgattaccctgaacataacagggaaagc 1419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24103 ggtcccccagggagtccttgagcgaaatattgtgattaccctgaacataacagggaaagc 24162
Query: 1420 tggagccaccctggacctcctggtggagaacatggggcgtgtgaactatggcaattccat 1479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24163 tggagccaccctggacctcctggtggagaacatggggcgtgtgaactatggcaattccat 24222
Query: 1480 caatgattttaagg 1493
||||||||||||||
Sbjct: 24223 caatgattttaagg 24236
Score = 248 bits (125), Expect = 1e-62
Identities = 125/125 (100%)
Strand = Plus / Plus
Query: 805 gatcaattctgaattctacactggctggttagaccattggggccaacctcactcgacagt 864
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 736 gatcaattctgaattctacactggctggttagaccattggggccaacctcactcgacagt 795
Query: 865 caagactcaagtggtggcttctttcctccacgacatacttgcccttggtgcaaatgtgaa 924
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 796 caagactcaagtggtggcttctttcctccacgacatacttgcccttggtgcaaatgtgaa 855
Query: 925 catgt 929
|||||
Sbjct: 856 catgt 860
Score = 210 bits (106), Expect = 3e-51
Identities = 112/114 (98%)
Strand = Plus / Plus
Query: 968 ggggccaacacaccctaccaaccacagcccaccagctatgattatgatgccccactgagt 1027
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6604 ggggccaacacaccccaccaaccacagcccaccagctatgattatgatgccccactgagt 6663
Query: 1028 gaggctggggatcttactgagaagtattttgctctgcgagatgtgattcagaag 1081
|||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 6664 gaggctggggatctcactgagaagtattttgctctgcgagatgtgattcagaag 6717
Score = 182 bits (92), Expect = 6e-43
Identities = 92/92 (100%)
Strand = Plus / Plus
Query: 1155 agttaaaaacagtggtggaagctctggacattctgtgtccctctggacccataaaaagct 1214
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20561 agttaaaaacagtggtggaagctctggacattctgtgtccctctggacccataaaaagct 20620
Query: 1215 tttatcccttgacatttatccaggtgaaacag 1246
||||||||||||||||||||||||||||||||
Sbjct: 20621 tttatcccttgacatttatccaggtgaaacag 20652
Score = 153 bits (77), Expect = 5e-34
Identities = 77/77 (100%)
Strand = Plus / Plus
Query: 1080 agttcaaaaaagtaccagaaggtcttattcctccatccacacccaagtttgcatatggaa 1139
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17780 agttcaaaaaagtaccagaaggtcttattcctccatccacacccaagtttgcatatggaa 17839
Query: 1140 aagttgctctgaaaaag 1156
|||||||||||||||||
Sbjct: 17840 aagttgctctgaaaaag 17856
Score = 83.8 bits (42), Expect = 4e-13
Identities = 42/42 (100%)
Strand = Plus / Plus
Query: 928 gtacatgtttattggtggcaccaatttcgcctattggaatgg 969
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 945 gtacatgtttattggtggcaccaatttcgcctattggaatgg 986
>gb|GL894277.1| Sus scrofa unplaced genomic scaffold chrU_scaffold2959
Length = 16198
Score = 353 bits (178), Expect = 3e-94
Identities = 178/178 (100%)
Strand = Plus / Minus
Query: 569 gaaaatgaatatggcagctactatagctgtgattacaactacctgcgtttcctgcagaag 628
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9255 gaaaatgaatatggcagctactatagctgtgattacaactacctgcgtttcctgcagaag 9196
Query: 629 cgtttccactactacttgggtgaggacgtggtcctgttcaccactgacggggcgcatgag 688
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9195 cgtttccactactacttgggtgaggacgtggtcctgttcaccactgacggggcgcatgag 9136
Query: 689 aagttcctggcgtgtgggacgctggagggcctctatgccacagtggacttcggagtag 746
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9135 aagttcctggcgtgtgggacgctggagggcctctatgccacagtggacttcggagtag 9078
Score = 327 bits (165), Expect = 2e-86
Identities = 171/173 (98%)
Strand = Plus / Minus
Query: 89 aatgcccccctgaggactttcaagatcgactacaaccgtaactgcttccttaaggatggc 148
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 14581 aatgcccccctgaggactttcaagatcgactacaaccgtaactgcttcctcaaggatggc 14522
Query: 149 cagccgttccgctacatctcaggaagtattcactatttccgcatgccccgcttctactgg 208
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14521 caaccgttccgctacatctcaggaagtattcactatttccgcatgccccgcttctactgg 14462
Query: 209 aaggaccggctgctgaagatgaagatggccgggctgaatgccattgagacgta 261
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14461 aaggaccggctgctgaagatgaagatggccgggctgaatgccattgagacgta 14409
Score = 194 bits (98), Expect = 2e-46
Identities = 101/102 (99%)
Strand = Plus / Minus
Query: 466 tccagactaccttgcagctgtggataagtggttgggtgtccttctgcccaagatgaagcc 525
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 11500 tccagactaccttgcagctgtggacaagtggttgggtgtccttctgcccaagatgaagcc 11441
Query: 526 tctcctctatcagaatggagggccgattattacagtgcaggt 567
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11440 tctcctctatcagaatggagggccgattattacagtgcaggt 11399
Score = 123 bits (62), Expect = 5e-25
Identities = 62/62 (100%)
Strand = Plus / Minus
Query: 409 gggaggattacctgcttggctactggagaaggaatctatcgttctccgttcttcccatcc 468
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12720 gggaggattacctgcttggctactggagaaggaatctatcgttctccgttcttcccatcc 12661
Query: 469 ag 470
||
Sbjct: 12660 ag 12659
Score = 121 bits (61), Expect = 2e-24
Identities = 61/61 (100%)
Strand = Plus / Minus
Query: 745 agatgccaacatcacagctgcttttctaatgcagaggaagtatgaacccagaggaccctt 804
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5281 agatgccaacatcacagctgcttttctaatgcagaggaagtatgaacccagaggaccctt 5222
Query: 805 g 805
|
Sbjct: 5221 g 5221
>gb|GL893679.1| Sus scrofa unplaced genomic scaffold chrU_scaffold242
Length = 310
Score = 293 bits (148), Expect = 2e-76
Identities = 151/152 (99%)
Strand = Plus / Minus
Query: 259 gtacgtggcctggaacttccacgagccctggccaggaaagtaccaattcacgggggacca 318
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 191 gtacgtggcctggaacttccacgagccctggccaggaaagtaccaattcactggggacca 132
Query: 319 tgatgtggagtattttattagactggcccatcagctgggactgctggtgatcctgaggcc 378
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 131 tgatgtggagtattttattagactggcccatcagctgggactgctggtgatcctgaggcc 72
Query: 379 tggaccctacatctgtgcggagtgggacatgg 410
||||||||||||||||||||||||||||||||
Sbjct: 71 tggaccctacatctgtgcggagtgggacatgg 40
>gb|GL895089.1| Sus scrofa unplaced genomic scaffold chrU_scaffold369
Length = 783
Score = 236 bits (119), Expect = 4e-59
Identities = 119/119 (100%)
Strand = Plus / Minus
Query: 1244 cagtattttgggtttgtactgtaccggacaacgcttcctaaagactgcaaggacccaaca 1303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 408 cagtattttgggtttgtactgtaccggacaacgcttcctaaagactgcaaggacccaaca 349
Query: 1304 catctctcttcgcccttcaatggtgtccacgatcgggcttatgtctctgtggacggggt 1362
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 348 catctctcttcgcccttcaatggtgtccacgatcgggcttatgtctctgtggacggggt 290
Database: Sscrofa_10.2.fasta
Posted date: Nov 16, 2011 10:34 AM
Number of letters in database: 2,808,509,378
Number of sequences in database: 4582
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4582
Number of Hits to DB: 68,440,398
Number of extensions: 4977
Number of successful extensions: 4977
Number of sequences better than 1.0e-05: 5
Number of HSP's gapped: 4977
Number of HSP's successfully gapped: 16
Length of query: 2336
Length of database: 2,808,509,378
Length adjustment: 22
Effective length of query: 2314
Effective length of database: 2,808,408,574
Effective search space: 6498657440236
Effective search space used: 6498657440236
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 18 (36.2 bits)
S2: 30 (60.0 bits)