Animal-Genome cDNA HTMT1_0029

Search to RefSeqMP_Rel49

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= HTMT1_0029_D11
         (1015 letters)

Database: RefSeq49_MP.fasta 
           30,036 sequences; 15,617,559 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_035528.1| brain mitochondrial carrier protein 1 isoform 2...   353   9e-98
Alignment   gi|NP_001159922.1| brain mitochondrial carrier protein 1 isofor...   353   9e-98
Alignment   gi|NP_080508.1| kidney mitochondrial carrier protein 1 [Mus mus...   290   9e-79
Alignment   gi|NP_082987.1| mitochondrial uncoupling protein 4 [Mus musculu...   142   4e-34
Alignment   gi|NP_033490.1| mitochondrial uncoupling protein 3 [Mus musculu...   136   2e-32
Alignment   gi|NP_035801.3| mitochondrial uncoupling protein 2 [Mus musculu...   134   1e-31
Alignment   gi|NP_077173.1| mitochondrial 2-oxoglutarate/malate carrier pro...   127   1e-29
Alignment   gi|NP_033489.1| mitochondrial brown fat uncoupling protein 1 [M...   105   4e-23
Alignment   gi|NP_038798.2| mitochondrial dicarboxylate carrier [Mus muscul...    84   2e-16
Alignment   gi|NP_001013802.1| solute carrier family 25 member 34 [Mus musc...    79   4e-15

>ref|NP_035528.1| brain mitochondrial carrier protein 1 isoform 2 [Mus musculus].
          Length = 322

 Score =  353 bits (907), Expect = 9e-98
 Identities = 173/175 (98%), Positives = 175/175 (100%)
 Frame = +1

Query: 1   SGVISSTIANPTDVLKIRMQAQGSLFQGSMIGSFIDIYQQEGTRGLWRGVVPTAQRAAIV 180
           SGVISSTIANPTDVLKIRMQAQGSLFQGSMIGSFIDIYQQEGTRGLWRGVVPTAQRAAIV
Sbjct: 148 SGVISSTIANPTDVLKIRMQAQGSLFQGSMIGSFIDIYQQEGTRGLWRGVVPTAQRAAIV 207

Query: 181 VGVELPVYDITKKHLILSGVLGDTILTHFVSSFTCGLAGALASNPVDVVRTRMMNQRAIV 360
           VGVELPVYDITKKHLI+SG+LGDTILTHFVSSFTCGLAGALASNPVDVVRTRMMNQRAIV
Sbjct: 208 VGVELPVYDITKKHLIVSGMLGDTILTHFVSSFTCGLAGALASNPVDVVRTRMMNQRAIV 267

Query: 361 GHVDLYKGTLDGILKMWKHEGFFALYKGFWPNWLRLGPWNIIFFITYEQLKRLQI 525
           GHVDLYKGTLDGILKMWKHEGFFALYKGFWPNWLRLGPWNIIFFITYEQLKRLQI
Sbjct: 268 GHVDLYKGTLDGILKMWKHEGFFALYKGFWPNWLRLGPWNIIFFITYEQLKRLQI 322



 Score = 58.9 bits (141), Expect = 6e-09
 Identities = 41/163 (25%), Positives = 78/163 (47%), Gaps = 13/163 (7%)
 Frame = +1

Query: 4   GVISSTIAN----PTDVLKIRMQAQGSLFQ--------GSMIGSFIDIYQQEGTRGLWRG 147
           G ++S +A     P D+ K R+Q QG              M  +   IY++EG   L+ G
Sbjct: 44  GGLASIVAEFGTFPVDLTKTRLQVQGQSIDVRFKEIKYRGMFHALFRIYKEEGILALYSG 103

Query: 148 VVPTAQRAAIVVGVELPVYDITKKHLILSGVLGDTILTHFVSSFTCGLAGALASNPVDVV 327
           + P   R A    +++ +Y  + K L +  +  +T+L + +     G+  +  +NP DV+
Sbjct: 104 IAPALLRQASYGTIKIGIYQ-SLKRLFVERLEDETLLINMICGVVSGVISSTIANPTDVL 162

Query: 328 RTRMMNQRAIVGHVDLYKGTLDG-ILKMWKHEGFFALYKGFWP 453
           + RM  Q +      L++G++ G  + +++ EG   L++G  P
Sbjct: 163 KIRMQAQGS------LFQGSMIGSFIDIYQQEGTRGLWRGVVP 199


>ref|NP_001159922.1| brain mitochondrial carrier protein 1 isoform 1 [Mus musculus].
          Length = 325

 Score =  353 bits (907), Expect = 9e-98
 Identities = 173/175 (98%), Positives = 175/175 (100%)
 Frame = +1

Query: 1   SGVISSTIANPTDVLKIRMQAQGSLFQGSMIGSFIDIYQQEGTRGLWRGVVPTAQRAAIV 180
           SGVISSTIANPTDVLKIRMQAQGSLFQGSMIGSFIDIYQQEGTRGLWRGVVPTAQRAAIV
Sbjct: 151 SGVISSTIANPTDVLKIRMQAQGSLFQGSMIGSFIDIYQQEGTRGLWRGVVPTAQRAAIV 210

Query: 181 VGVELPVYDITKKHLILSGVLGDTILTHFVSSFTCGLAGALASNPVDVVRTRMMNQRAIV 360
           VGVELPVYDITKKHLI+SG+LGDTILTHFVSSFTCGLAGALASNPVDVVRTRMMNQRAIV
Sbjct: 211 VGVELPVYDITKKHLIVSGMLGDTILTHFVSSFTCGLAGALASNPVDVVRTRMMNQRAIV 270

Query: 361 GHVDLYKGTLDGILKMWKHEGFFALYKGFWPNWLRLGPWNIIFFITYEQLKRLQI 525
           GHVDLYKGTLDGILKMWKHEGFFALYKGFWPNWLRLGPWNIIFFITYEQLKRLQI
Sbjct: 271 GHVDLYKGTLDGILKMWKHEGFFALYKGFWPNWLRLGPWNIIFFITYEQLKRLQI 325



 Score = 58.9 bits (141), Expect = 6e-09
 Identities = 41/163 (25%), Positives = 78/163 (47%), Gaps = 13/163 (7%)
 Frame = +1

Query: 4   GVISSTIAN----PTDVLKIRMQAQGSLFQ--------GSMIGSFIDIYQQEGTRGLWRG 147
           G ++S +A     P D+ K R+Q QG              M  +   IY++EG   L+ G
Sbjct: 47  GGLASIVAEFGTFPVDLTKTRLQVQGQSIDVRFKEIKYRGMFHALFRIYKEEGILALYSG 106

Query: 148 VVPTAQRAAIVVGVELPVYDITKKHLILSGVLGDTILTHFVSSFTCGLAGALASNPVDVV 327
           + P   R A    +++ +Y  + K L +  +  +T+L + +     G+  +  +NP DV+
Sbjct: 107 IAPALLRQASYGTIKIGIYQ-SLKRLFVERLEDETLLINMICGVVSGVISSTIANPTDVL 165

Query: 328 RTRMMNQRAIVGHVDLYKGTLDG-ILKMWKHEGFFALYKGFWP 453
           + RM  Q +      L++G++ G  + +++ EG   L++G  P
Sbjct: 166 KIRMQAQGS------LFQGSMIGSFIDIYQQEGTRGLWRGVVP 202


>ref|NP_080508.1| kidney mitochondrial carrier protein 1 [Mus musculus].
          Length = 291

 Score =  290 bits (743), Expect = 9e-79
 Identities = 143/176 (81%), Positives = 156/176 (88%), Gaps = 1/176 (0%)
 Frame = +1

Query: 1   SGVISSTIANPTDVLKIRMQAQGSLFQGSMIGSFIDIYQQEGTRGLWRGVVPTAQRAAIV 180
           SGVISS IANPTDVLKIRMQAQ S  QG MI SF+ IYQQEGTRGLW+GV  TAQRAAIV
Sbjct: 116 SGVISSAIANPTDVLKIRMQAQNSAVQGGMIDSFMSIYQQEGTRGLWKGVSLTAQRAAIV 175

Query: 181 VGVELPVYDITKKHLILSGVLGDTILTHFVSSFTCGLAGALASNPVDVVRTRMMNQRAI- 357
           VGVELPVYDITKKHLILSG++GDT+ THF+SSFTCGL GALASNPVDVVRTRMMNQRA+ 
Sbjct: 176 VGVELPVYDITKKHLILSGLMGDTVATHFLSSFTCGLVGALASNPVDVVRTRMMNQRALR 235

Query: 358 VGHVDLYKGTLDGILKMWKHEGFFALYKGFWPNWLRLGPWNIIFFITYEQLKRLQI 525
            G    YKGTLD +L+ WK+EGFFALYKGFWPNWLRLGPWNIIFF+TYEQLK+L +
Sbjct: 236 DGRCAGYKGTLDCLLQTWKNEGFFALYKGFWPNWLRLGPWNIIFFLTYEQLKKLDL 291


>ref|NP_082987.1| mitochondrial uncoupling protein 4 [Mus musculus].
          Length = 322

 Score =  142 bits (358), Expect = 4e-34
 Identities = 74/182 (40%), Positives = 115/182 (63%), Gaps = 9/182 (4%)
 Frame = +1

Query: 1   SGVISSTIANPTDVLKIRMQAQGSL--------FQGSMIGSFIDIYQQEGTRGLWRGVVP 156
           +GVI   +ANPTD++K++MQ +G          F+G +  +F  I  + G RGLW G +P
Sbjct: 136 AGVIGQFLANPTDLVKVQMQMEGKRRLEGKPLRFRG-VHHAFAKILAEGGIRGLWAGWIP 194

Query: 157 TAQRAAIVVGVELPVYDITKKHLILSGVLGDTILTHFVSSFTCGLAGALASNPVDVVRTR 336
             QRAA+V   +L  YD  K +L+L+  L D I TH +SS   GL  ++   P DV+++R
Sbjct: 195 NIQRAALVNMGDLTTYDTVKHYLVLNTPLEDNISTHGLSSLCSGLVASILGTPADVIKSR 254

Query: 337 MMNQ-RAIVGHVDLYKGTLDGILKMWKHEGFFALYKGFWPNWLRLGPWNIIFFITYEQLK 513
           +MNQ R   G   LYK + D +++  + EGF +LYKGF P+WLR+ PW+++F++TYE+++
Sbjct: 255 IMNQPRDKQGRGLLYKSSADCLIQAVQGEGFLSLYKGFLPSWLRMTPWSMVFWLTYEKIR 314

Query: 514 RL 519
            +
Sbjct: 315 EM 316



 Score = 55.1 bits (131), Expect = 9e-08
 Identities = 45/179 (25%), Positives = 77/179 (43%), Gaps = 18/179 (10%)
 Frame = +1

Query: 31  PTDVLKIRMQAQGS-----LFQGS--------MIGSFIDIYQQEGTRGLWRGVVPTAQRA 171
           P D+ K R+Q QG      L  G+        M+ + + I Q+EG   LW+GV P   R 
Sbjct: 38  PLDLTKTRLQMQGEAALARLGDGAVDSAPYRGMVRTALGIVQEEGFLKLWQGVTPAIYRH 97

Query: 172 AIVVGVELPVYDITKKHLILSGVLGD---TILTHFVSSFTCGLAGALASNPVDVVRTRMM 342
            +  G  +  Y+  ++  ++ G   D    +    +     G+ G   +NP D+V+ +M 
Sbjct: 98  VVYSGGRMVTYEHLRE--VVFGKSEDKHYPLWKSVIGGMMAGVIGQFLANPTDLVKVQMQ 155

Query: 343 --NQRAIVGHVDLYKGTLDGILKMWKHEGFFALYKGFWPNWLRLGPWNIIFFITYEQLK 513
              +R + G    ++G      K+    G   L+ G+ PN  R    N+    TY+ +K
Sbjct: 156 MEGKRRLEGKPLRFRGVHHAFAKILAEGGIRGLWAGWIPNIQRAALVNMGDLTTYDTVK 214


>ref|NP_033490.1| mitochondrial uncoupling protein 3 [Mus musculus].
          Length = 308

 Score =  136 bits (343), Expect = 2e-32
 Identities = 79/179 (44%), Positives = 109/179 (60%), Gaps = 7/179 (3%)
 Frame = +1

Query: 1   SGVISSTIANPTDVLKIRMQAQGSL-------FQGSMIGSFIDIYQQEGTRGLWRGVVPT 159
           +G ++ T A PTDV+K+R QA   L       ++G+M  ++  I ++EG RGLW+G  P 
Sbjct: 123 TGAMAVTCAQPTDVVKVRFQAMIRLGTGGERKYRGTM-DAYRTIAREEGVRGLWKGTWPN 181

Query: 160 AQRAAIVVGVELPVYDITKKHLILSGVLGDTILTHFVSSFTCGLAGALASNPVDVVRTRM 339
             R AIV   E+  YDI K+ L+ S +  D    HFVS+F  G    + ++PVDVV+TR 
Sbjct: 182 ITRNAIVNCAEMVTYDIIKEKLLESHLFTDNFPCHFVSAFGAGFCATVVASPVDVVKTRY 241

Query: 340 MNQRAIVGHVDLYKGTLDGILKMWKHEGFFALYKGFWPNWLRLGPWNIIFFITYEQLKR 516
           MN  A +G    Y+  L  +LKM   EG  A YKGF P++LRLG WN++ F+TYEQLKR
Sbjct: 242 MN--APLGR---YRSPLHCMLKMVAQEGPTAFYKGFVPSFLRLGAWNVMMFVTYEQLKR 295



 Score = 72.0 bits (175), Expect = 7e-13
 Identities = 45/168 (26%), Positives = 74/168 (44%), Gaps = 7/168 (4%)
 Frame = +1

Query: 31  PTDVLKIRMQAQG------SLFQGSMIGSFIDIYQQEGTRGLWRGVVPTAQRAAIVVGVE 192
           P D  K+R+Q QG      S+    ++G+ + + + EG R  + G+V    R      + 
Sbjct: 33  PLDTAKVRLQIQGENPGAQSVQYRGVLGTILTMVRTEGPRSPYSGLVAGLHRQMSFASIR 92

Query: 193 LPVYDITKKHLILSGVLGDTILTHFVSSFTCGLAGALASNPVDVVRTRMMNQ-RAIVGHV 369
           + +YD  K+     G    ++    ++  T G      + P DVV+ R     R   G  
Sbjct: 93  IGLYDSVKQFYTPKGADHSSVAIRILAGCTTGAMAVTCAQPTDVVKVRFQAMIRLGTGGE 152

Query: 370 DLYKGTLDGILKMWKHEGFFALYKGFWPNWLRLGPWNIIFFITYEQLK 513
             Y+GT+D    + + EG   L+KG WPN  R    N    +TY+ +K
Sbjct: 153 RKYRGTMDAYRTIAREEGVRGLWKGTWPNITRNAIVNCAEMVTYDIIK 200


>ref|NP_035801.3| mitochondrial uncoupling protein 2 [Mus musculus].
          Length = 309

 Score =  134 bits (336), Expect = 1e-31
 Identities = 72/176 (40%), Positives = 101/176 (57%), Gaps = 4/176 (2%)
 Frame = +1

Query: 1   SGVISSTIANPTDVLKIRMQAQGSLFQGSMIGSFIDIYQ----QEGTRGLWRGVVPTAQR 168
           +G ++  +A PTDV+K+R QAQ     G    S ++ Y+    +EG RGLW+G  P   R
Sbjct: 126 TGALAVAVAQPTDVVKVRFQAQARAGGGRRYQSTVEAYKTIAREEGIRGLWKGTSPNVAR 185

Query: 169 AAIVVGVELPVYDITKKHLILSGVLGDTILTHFVSSFTCGLAGALASNPVDVVRTRMMNQ 348
            AIV   EL  YD+ K  L+ + ++ D +  HF S+F  G    + ++PVDVV+TR MN 
Sbjct: 186 NAIVNCAELVTYDLIKDTLLKANLMTDDLPCHFTSAFGAGFCTTVIASPVDVVKTRYMNS 245

Query: 349 RAIVGHVDLYKGTLDGILKMWKHEGFFALYKGFWPNWLRLGPWNIIFFITYEQLKR 516
                 +  Y       L M + EG  A YKGF P++LRLG WN++ F+TYEQLKR
Sbjct: 246 A-----LGQYHSAGHCALTMLRKEGPRAFYKGFMPSFLRLGSWNVVMFVTYEQLKR 296



 Score = 64.3 bits (155), Expect = 1e-10
 Identities = 49/178 (27%), Positives = 77/178 (43%), Gaps = 10/178 (5%)
 Frame = +1

Query: 10  ISSTIANPTDVLKIRMQAQG----------SLFQGSMIGSFIDIYQQEGTRGLWRGVVPT 159
           I+  I  P D  K+R+Q QG          S     ++G+ + + + EG R L+ G+V  
Sbjct: 26  IADLITFPLDTAKVRLQIQGESQGLVRTAASAQYRGVLGTILTMVRTEGPRSLYNGLVAG 85

Query: 160 AQRAAIVVGVELPVYDITKKHLILSGVLGDTILTHFVSSFTCGLAGALASNPVDVVRTRM 339
            QR      V + +YD + K     G     I +  ++  T G      + P DVV+ R 
Sbjct: 86  LQRQMSFASVRIGLYD-SVKQFYTKGSEHAGIGSRLLAGSTTGALAVAVAQPTDVVKVRF 144

Query: 340 MNQRAIVGHVDLYKGTLDGILKMWKHEGFFALYKGFWPNWLRLGPWNIIFFITYEQLK 513
             Q A  G    Y+ T++    + + EG   L+KG  PN  R    N    +TY+ +K
Sbjct: 145 QAQ-ARAGGGRRYQSTVEAYKTIAREEGIRGLWKGTSPNVARNAIVNCAELVTYDLIK 201


>ref|NP_077173.1| mitochondrial 2-oxoglutarate/malate carrier protein [Mus musculus].
          Length = 314

 Score =  127 bits (320), Expect = 1e-29
 Identities = 71/178 (39%), Positives = 101/178 (56%), Gaps = 6/178 (3%)
 Frame = +1

Query: 1   SGVISSTIANPTDVLKIRMQAQGSLFQGSMIG------SFIDIYQQEGTRGLWRGVVPTA 162
           +G   + +  P +V  IRM A G L      G      + + I ++EG   LWRG +PT 
Sbjct: 129 AGATGAFVGTPAEVALIRMTADGRLPADQRRGYKNVFNALVRIAREEGVPTLWRGCIPTM 188

Query: 163 QRAAIVVGVELPVYDITKKHLILSGVLGDTILTHFVSSFTCGLAGALASNPVDVVRTRMM 342
            RA +V   +L  Y  +K+ L+ SG   D IL HF +S   GL    AS PVD+V+TR+ 
Sbjct: 189 ARAVVVNAAQLASYSQSKQFLLDSGYFSDNILCHFCASMISGLVTTAASMPVDIVKTRIQ 248

Query: 343 NQRAIVGHVDLYKGTLDGILKMWKHEGFFALYKGFWPNWLRLGPWNIIFFITYEQLKR 516
           N R I G  + YK  LD +LK+ ++EGFF+L+KGF P + RLGP  ++ FI  EQ+ +
Sbjct: 249 NMRMIDGKPE-YKNGLDVLLKVVRYEGFFSLWKGFTPYYARLGPHTVLTFIFLEQMNK 305


>ref|NP_033489.1| mitochondrial brown fat uncoupling protein 1 [Mus musculus].
          Length = 307

 Score =  105 bits (263), Expect = 4e-23
 Identities = 62/178 (34%), Positives = 96/178 (53%), Gaps = 6/178 (3%)
 Frame = +1

Query: 1   SGVISSTIANPTDVLKIRMQAQGSL------FQGSMIGSFIDIYQQEGTRGLWRGVVPTA 162
           +G ++  I  PT+V+K+RMQAQ  L      + G+   ++  I   E    LW+G  P  
Sbjct: 123 TGGVAVFIGQPTEVVKVRMQAQSHLHGIKPRYTGTY-NAYRVIATTESLSTLWKGTTPNL 181

Query: 163 QRAAIVVGVELPVYDITKKHLILSGVLGDTILTHFVSSFTCGLAGALASNPVDVVRTRMM 342
            R  I+   EL  YD+ K  L+ + +L D +  H +S+   G    L ++PVDVV+TR +
Sbjct: 182 MRNVIINCTELVTYDLMKGALVNNKILADDVPCHLLSALVAGFCTTLLASPVDVVKTRFI 241

Query: 343 NQRAIVGHVDLYKGTLDGILKMWKHEGFFALYKGFWPNWLRLGPWNIIFFITYEQLKR 516
           N  ++ G    Y       + M+  EG  A +KGF  ++LRLG WN+I F+ +EQLK+
Sbjct: 242 N--SLPGQ---YPSVPSCAMSMYTKEGPTAFFKGFVASFLRLGSWNVIMFVCFEQLKK 294



 Score = 54.7 bits (130), Expect = 1e-07
 Identities = 40/177 (22%), Positives = 72/177 (40%), Gaps = 6/177 (3%)
 Frame = +1

Query: 1   SGVISSTIANPTDVLKIRMQAQG------SLFQGSMIGSFIDIYQQEGTRGLWRGVVPTA 162
           S  ++  I  P D  K+R+Q QG      ++    ++G+   + + EG   L+ G+    
Sbjct: 23  SACLADIITFPLDTAKVRLQIQGEGQASSTIRYKGVLGTITTLAKTEGLPKLYSGLPAGI 82

Query: 163 QRAAIVVGVELPVYDITKKHLILSGVLGDTILTHFVSSFTCGLAGALASNPVDVVRTRMM 342
           QR      + + +YD  +++         ++     +    G        P +VV+ RM 
Sbjct: 83  QRQISFASLRIGLYDSVQEYFSSGRETPASLGNKISAGLMTGGVAVFIGQPTEVVKVRMQ 142

Query: 343 NQRAIVGHVDLYKGTLDGILKMWKHEGFFALYKGFWPNWLRLGPWNIIFFITYEQLK 513
            Q  + G    Y GT +    +   E    L+KG  PN +R    N    +TY+ +K
Sbjct: 143 AQSHLHGIKPRYTGTYNAYRVIATTESLSTLWKGTTPNLMRNVIINCTELVTYDLMK 199


>ref|NP_038798.2| mitochondrial dicarboxylate carrier [Mus musculus].
          Length = 287

 Score = 83.6 bits (205), Expect = 2e-16
 Identities = 54/179 (30%), Positives = 91/179 (50%), Gaps = 7/179 (3%)
 Frame = +1

Query: 1   SGVISSTIANPTDVLKIRMQ-------AQGSLFQGSMIGSFIDIYQQEGTRGLWRGVVPT 159
           SG+    +  P D++ +RMQ       +Q   +  ++ G +  + ++E  R L+ G    
Sbjct: 108 SGLTGGFVGTPADLVNVRMQNDMKLPPSQRRNYSHALDGLY-RVAREESLRKLFSGATMA 166

Query: 160 AQRAAIVVGVELPVYDITKKHLILSGVLGDTILTHFVSSFTCGLAGALASNPVDVVRTRM 339
           + R A+V   +L  YD  K+ ++ +G L D I THFVSSF  G        P+DV++TR+
Sbjct: 167 SSRGALVTVGQLSCYDQAKQLVLSTGYLSDNIFTHFVSSFIAGGCATFLCQPLDVLKTRL 226

Query: 340 MNQRAIVGHVDLYKGTLDGILKMWKHEGFFALYKGFWPNWLRLGPWNIIFFITYEQLKR 516
           MN +        Y+G     ++  K  G  A +KG +P  +RL P  ++ F+  EQL++
Sbjct: 227 MNSKG------EYQGVFHCAMETAK-LGPQAFFKGLFPAGIRLIPHTVLTFMFLEQLRK 278


>ref|NP_001013802.1| solute carrier family 25 member 34 [Mus musculus].
          Length = 318

 Score = 79.3 bits (194), Expect = 4e-15
 Identities = 55/183 (30%), Positives = 88/183 (48%), Gaps = 10/183 (5%)
 Frame = +1

Query: 1   SGVISSTIANPTDVLKIRMQAQ-------GSLFQGSMIGSFID-IYQQEGTRGLWRGVVP 156
           +G + + + +P  ++K ++QAQ       G   Q   + S ++ I++Q+G  GLWRGV  
Sbjct: 127 AGALGAFVGSPAYLVKTQLQAQTVATMAVGHQHQHQGVLSALETIWRQQGMLGLWRGVGG 186

Query: 157 TAQRAAIVVGVELPVYDITKKHLI-LSGVLGDTILTHFVSSFTCGLAGALASNPVDVVRT 333
              R  +    +L  +   K  +      L D+ L          +A      P+DVV T
Sbjct: 187 AVPRVTVGSAAQLATFTSAKAWVQDRQWFLEDSWLVTLAGGMISSIAVVAVMTPLDVVST 246

Query: 334 RMMNQRAI-VGHVDLYKGTLDGILKMWKHEGFFALYKGFWPNWLRLGPWNIIFFITYEQL 510
           R+ NQ     G   LY G  D ++K  + EG  ALYKG  P +LRLGP  I+    +++L
Sbjct: 247 RLYNQPVDRAGRGQLYGGLADCLVKTCQQEGPLALYKGLGPAYLRLGPHTILSMFFWDEL 306

Query: 511 KRL 519
           ++L
Sbjct: 307 RKL 309



 Score = 51.2 bits (121), Expect = 1e-06
 Identities = 38/157 (24%), Positives = 71/157 (45%), Gaps = 12/157 (7%)
 Frame = +1

Query: 10  ISSTIANPTDVLKIRMQAQGSL---------FQGSMIGSFIDIYQQEGTRGLWRGVVPTA 162
           ++    NP +V+K R+Q QG L         ++G  + S   + + +G  GL +G+    
Sbjct: 33  LACVFTNPLEVVKTRLQLQGELQAPGTYPRPYRG-FVSSVAAVARADGLWGLQKGLAAGL 91

Query: 163 QRAAIVVGVELPVYDITKKHLILSGVLGDTILTHFVSSFTCGLAGALASNPVDVVRTRMM 342
               ++ GV    Y +  +   L+   G T+    V+    G  GA   +P  +V+T++ 
Sbjct: 92  LYQGLMNGVRFYCYSLACQ-AGLTQQPGGTV----VAGAAAGALGAFVGSPAYLVKTQLQ 146

Query: 343 NQRA---IVGHVDLYKGTLDGILKMWKHEGFFALYKG 444
            Q      VGH   ++G L  +  +W+ +G   L++G
Sbjct: 147 AQTVATMAVGHQHQHQGVLSALETIWRQQGMLGLWRG 183


  Database: RefSeq49_MP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 15,617,559
  Number of sequences in database:  30,036
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 30036
Number of Hits to DB: 31,192,088
Number of extensions: 785178
Number of successful extensions: 2346
Number of sequences better than 1.0e-05: 48
Number of HSP's gapped: 2217
Number of HSP's successfully gapped: 75
Length of query: 338
Length of database: 15,617,559
Length adjustment: 102
Effective length of query: 236
Effective length of database: 12,553,887
Effective search space: 2962717332
Effective search space used: 2962717332
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)

Search to RefSeqCP_Rel49

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= HTMT1_0029_D11
         (1015 letters)

Database: RefSeq49_CP.fasta 
           33,336 sequences; 18,874,504 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|XP_865863.1| PREDICTED: similar to Brain mitochondrial carri...   355   4e-98
Alignment   gi|XP_852497.1| PREDICTED: similar to Brain mitochondrial carri...   355   4e-98
Alignment   gi|XP_851381.1| PREDICTED: similar to solute carrier family 25,...   271   9e-73
Alignment   gi|XP_865850.1| PREDICTED: similar to Brain mitochondrial carri...   257   1e-68
Alignment   gi|XP_852329.1| PREDICTED: similar to Mitochondrial uncoupling ...   144   2e-34
Alignment   gi|NP_001003048.1| mitochondrial uncoupling protein 2 [Canis lu...   135   5e-32
Alignment   gi|NP_001003047.1| mitochondrial uncoupling protein 3 [Canis lu...   134   1e-31
Alignment   gi|XP_856284.1| PREDICTED: similar to Mitochondrial 2-oxoglutar...   127   2e-29
Alignment   gi|XP_536607.1| PREDICTED: similar to Mitochondrial 2-oxoglutar...   127   2e-29
Alignment   gi|NP_001003046.1| mitochondrial brown fat uncoupling protein 1...   114   1e-25

>ref|XP_865863.1| PREDICTED: similar to Brain mitochondrial carrier protein-1
           (BMCP-1) (Mitochondrial uncoupling protein 5) (UCP 5)
           (Solute carrier family 25, member 14) isoform 5 [Canis
           familiaris].
          Length = 325

 Score =  355 bits (911), Expect = 4e-98
 Identities = 174/175 (99%), Positives = 175/175 (100%)
 Frame = +1

Query: 1   SGVISSTIANPTDVLKIRMQAQGSLFQGSMIGSFIDIYQQEGTRGLWRGVVPTAQRAAIV 180
           SGVISSTIANPTDVLKIRMQAQGSLFQGSMIGSFIDIYQQEGTRGLWRGVVPTAQRAAIV
Sbjct: 151 SGVISSTIANPTDVLKIRMQAQGSLFQGSMIGSFIDIYQQEGTRGLWRGVVPTAQRAAIV 210

Query: 181 VGVELPVYDITKKHLILSGVLGDTILTHFVSSFTCGLAGALASNPVDVVRTRMMNQRAIV 360
           VGVELPVYDITKKHLILSGV+GDTILTHFVSSFTCGLAGALASNPVDVVRTRMMNQRAIV
Sbjct: 211 VGVELPVYDITKKHLILSGVMGDTILTHFVSSFTCGLAGALASNPVDVVRTRMMNQRAIV 270

Query: 361 GHVDLYKGTLDGILKMWKHEGFFALYKGFWPNWLRLGPWNIIFFITYEQLKRLQI 525
           GHVDLYKGTLDGILKMWKHEGFFALYKGFWPNWLRLGPWNIIFFITYEQLKRLQI
Sbjct: 271 GHVDLYKGTLDGILKMWKHEGFFALYKGFWPNWLRLGPWNIIFFITYEQLKRLQI 325



 Score = 59.3 bits (142), Expect = 6e-09
 Identities = 41/163 (25%), Positives = 78/163 (47%), Gaps = 13/163 (7%)
 Frame = +1

Query: 4   GVISSTIAN----PTDVLKIRMQAQGSLFQ--------GSMIGSFIDIYQQEGTRGLWRG 147
           G ++S +A     P D+ K R+Q QG              M  +   IY++EG   L+ G
Sbjct: 47  GGLASIVAEFGTFPVDLTKTRLQVQGQSIDVRFKEIKYRGMFHALFRIYKEEGVLALYSG 106

Query: 148 VVPTAQRAAIVVGVELPVYDITKKHLILSGVLGDTILTHFVSSFTCGLAGALASNPVDVV 327
           + P   R A    +++ +Y  + K L +  +  +T+L + +     G+  +  +NP DV+
Sbjct: 107 IAPALLRQASYGTIKIGIYQ-SLKRLFVERLEDETLLINMICGVVSGVISSTIANPTDVL 165

Query: 328 RTRMMNQRAIVGHVDLYKGTLDG-ILKMWKHEGFFALYKGFWP 453
           + RM  Q +      L++G++ G  + +++ EG   L++G  P
Sbjct: 166 KIRMQAQGS------LFQGSMIGSFIDIYQQEGTRGLWRGVVP 202


>ref|XP_852497.1| PREDICTED: similar to Brain mitochondrial carrier protein-1
           (BMCP-1) (Mitochondrial uncoupling protein 5) (UCP 5)
           (Solute carrier family 25, member 14) isoform 2 [Canis
           familiaris].
          Length = 325

 Score =  355 bits (911), Expect = 4e-98
 Identities = 174/175 (99%), Positives = 175/175 (100%)
 Frame = +1

Query: 1   SGVISSTIANPTDVLKIRMQAQGSLFQGSMIGSFIDIYQQEGTRGLWRGVVPTAQRAAIV 180
           SGVISSTIANPTDVLKIRMQAQGSLFQGSMIGSFIDIYQQEGTRGLWRGVVPTAQRAAIV
Sbjct: 151 SGVISSTIANPTDVLKIRMQAQGSLFQGSMIGSFIDIYQQEGTRGLWRGVVPTAQRAAIV 210

Query: 181 VGVELPVYDITKKHLILSGVLGDTILTHFVSSFTCGLAGALASNPVDVVRTRMMNQRAIV 360
           VGVELPVYDITKKHLILSGV+GDTILTHFVSSFTCGLAGALASNPVDVVRTRMMNQRAIV
Sbjct: 211 VGVELPVYDITKKHLILSGVMGDTILTHFVSSFTCGLAGALASNPVDVVRTRMMNQRAIV 270

Query: 361 GHVDLYKGTLDGILKMWKHEGFFALYKGFWPNWLRLGPWNIIFFITYEQLKRLQI 525
           GHVDLYKGTLDGILKMWKHEGFFALYKGFWPNWLRLGPWNIIFFITYEQLKRLQI
Sbjct: 271 GHVDLYKGTLDGILKMWKHEGFFALYKGFWPNWLRLGPWNIIFFITYEQLKRLQI 325



 Score = 59.3 bits (142), Expect = 6e-09
 Identities = 41/163 (25%), Positives = 78/163 (47%), Gaps = 13/163 (7%)
 Frame = +1

Query: 4   GVISSTIAN----PTDVLKIRMQAQGSLFQ--------GSMIGSFIDIYQQEGTRGLWRG 147
           G ++S +A     P D+ K R+Q QG              M  +   IY++EG   L+ G
Sbjct: 47  GGLASIVAEFGTFPVDLTKTRLQVQGQSIDVRFKEIKYRGMFHALFRIYKEEGVLALYSG 106

Query: 148 VVPTAQRAAIVVGVELPVYDITKKHLILSGVLGDTILTHFVSSFTCGLAGALASNPVDVV 327
           + P   R A    +++ +Y  + K L +  +  +T+L + +     G+  +  +NP DV+
Sbjct: 107 IAPALLRQASYGTIKIGIYQ-SLKRLFVERLEDETLLINMICGVVSGVISSTIANPTDVL 165

Query: 328 RTRMMNQRAIVGHVDLYKGTLDG-ILKMWKHEGFFALYKGFWP 453
           + RM  Q +      L++G++ G  + +++ EG   L++G  P
Sbjct: 166 KIRMQAQGS------LFQGSMIGSFIDIYQQEGTRGLWRGVVP 202


>ref|XP_851381.1| PREDICTED: similar to solute carrier family 25, member 30 [Canis
           familiaris].
          Length = 510

 Score =  271 bits (692), Expect = 9e-73
 Identities = 132/163 (80%), Positives = 145/163 (88%), Gaps = 1/163 (0%)
 Frame = +1

Query: 1   SGVISSTIANPTDVLKIRMQAQGSLFQGSMIGSFIDIYQQEGTRGLWRGVVPTAQRAAIV 180
           SGV+SSTIANPTDVLKIRMQAQ S  QG MIG+FI+IYQQEG RGLW+GV  TAQRAAIV
Sbjct: 191 SGVVSSTIANPTDVLKIRMQAQSSTIQGGMIGNFINIYQQEGARGLWKGVSLTAQRAAIV 250

Query: 181 VGVELPVYDITKKHLILSGVLGDTILTHFVSSFTCGLAGALASNPVDVVRTRMMNQRAI- 357
           VGVELPVYD+TKKHLILSG++GDT+ THF+SSFTCGLAGALASNPVDVVRTRMMNQR + 
Sbjct: 251 VGVELPVYDLTKKHLILSGLMGDTVYTHFLSSFTCGLAGALASNPVDVVRTRMMNQRVLR 310

Query: 358 VGHVDLYKGTLDGILKMWKHEGFFALYKGFWPNWLRLGPWNII 486
            G    Y GTLD +L+ WK+EGFFALYKGFWPNWLRLGPWNII
Sbjct: 311 DGRCSGYTGTLDCLLQTWKNEGFFALYKGFWPNWLRLGPWNII 353


>ref|XP_865850.1| PREDICTED: similar to Brain mitochondrial carrier protein-1
           (BMCP-1) (Mitochondrial uncoupling protein 5) (UCP 5)
           (Solute carrier family 25, member 14) isoform 4 [Canis
           familiaris].
          Length = 290

 Score =  257 bits (657), Expect = 1e-68
 Identities = 131/162 (80%), Positives = 134/162 (82%)
 Frame = +1

Query: 1   SGVISSTIANPTDVLKIRMQAQGSLFQGSMIGSFIDIYQQEGTRGLWRGVVPTAQRAAIV 180
           SGVISSTIANPTDVLK+R+   G                         GVVPTAQRAAIV
Sbjct: 151 SGVISSTIANPTDVLKVRLTVVG-------------------------GVVPTAQRAAIV 185

Query: 181 VGVELPVYDITKKHLILSGVLGDTILTHFVSSFTCGLAGALASNPVDVVRTRMMNQRAIV 360
           VGVELPVYDITKKHLILSGV+GDTILTHFVSSFTCGLAGALASNPVDVVRTRMMNQRAIV
Sbjct: 186 VGVELPVYDITKKHLILSGVMGDTILTHFVSSFTCGLAGALASNPVDVVRTRMMNQRAIV 245

Query: 361 GHVDLYKGTLDGILKMWKHEGFFALYKGFWPNWLRLGPWNII 486
           GHVDLYKGTLDGILKMWKHEGFFALYKGFWPNWLRLGPWNII
Sbjct: 246 GHVDLYKGTLDGILKMWKHEGFFALYKGFWPNWLRLGPWNII 287


>ref|XP_852329.1| PREDICTED: similar to Mitochondrial uncoupling protein 4 (UCP 4)
           (Solute carrier family 25, member 27) [Canis
           familiaris].
          Length = 323

 Score =  144 bits (362), Expect = 2e-34
 Identities = 74/182 (40%), Positives = 116/182 (63%), Gaps = 9/182 (4%)
 Frame = +1

Query: 1   SGVISSTIANPTDVLKIRMQAQGSL--------FQGSMIGSFIDIYQQEGTRGLWRGVVP 156
           +GV+   +ANPTD++K++MQ +G          F+G +  +F  I  + G RGLW G VP
Sbjct: 137 AGVVGQFLANPTDLVKVQMQMEGKRKLEGKPLRFRG-VHHAFAKILSEGGIRGLWAGWVP 195

Query: 157 TAQRAAIVVGVELPVYDITKKHLILSGVLGDTILTHFVSSFTCGLAGALASNPVDVVRTR 336
             QRAA+V   +L  YD  K +L+L+  L D I+TH +SS   GL  ++   P DV+++R
Sbjct: 196 NIQRAALVNMGDLTTYDTVKHYLVLNTPLEDNIMTHGLSSLCSGLVASILGTPADVIKSR 255

Query: 337 MMNQ-RAIVGHVDLYKGTLDGILKMWKHEGFFALYKGFWPNWLRLGPWNIIFFITYEQLK 513
           +MNQ R   G   LYK + D +++  + EGF +LYKGF P+WLR+ PW+++F++TYE+++
Sbjct: 256 IMNQPRDKQGRGLLYKSSTDCLVQAVQGEGFMSLYKGFLPSWLRMTPWSMVFWLTYEKIR 315

Query: 514 RL 519
            +
Sbjct: 316 EM 317



 Score = 55.1 bits (131), Expect = 1e-07
 Identities = 44/180 (24%), Positives = 77/180 (42%), Gaps = 19/180 (10%)
 Frame = +1

Query: 31  PTDVLKIRMQAQGSL--------------FQGSMIGSFIDIYQQEGTRGLWRGVVPTAQR 168
           P D+ K R+Q QG                ++G M+ + + I Q+EG   LW+GV P   R
Sbjct: 39  PLDLTKTRLQMQGEAALARLGDSARESAPYRG-MVRTALGIVQEEGFLKLWQGVTPAIYR 97

Query: 169 AAIVVGVELPVYDITKKHLILSGVLGD---TILTHFVSSFTCGLAGALASNPVDVVRTRM 339
             +  G  +  Y+  ++  ++ G   D    +    +     G+ G   +NP D+V+ +M
Sbjct: 98  HIVYSGGRMVTYEHLRE--VVFGKSEDKHYPLWKSVIGGMMAGVVGQFLANPTDLVKVQM 155

Query: 340 M--NQRAIVGHVDLYKGTLDGILKMWKHEGFFALYKGFWPNWLRLGPWNIIFFITYEQLK 513
               +R + G    ++G      K+    G   L+ G+ PN  R    N+    TY+ +K
Sbjct: 156 QMEGKRKLEGKPLRFRGVHHAFAKILSEGGIRGLWAGWVPNIQRAALVNMGDLTTYDTVK 215


>ref|NP_001003048.1| mitochondrial uncoupling protein 2 [Canis lupus familiaris].
          Length = 309

 Score =  135 bits (341), Expect = 5e-32
 Identities = 73/176 (41%), Positives = 101/176 (57%), Gaps = 4/176 (2%)
 Frame = +1

Query: 1   SGVISSTIANPTDVLKIRMQAQGSLFQGSMIGSFIDIYQ----QEGTRGLWRGVVPTAQR 168
           +G ++  +A PTDV+K+R QAQ     G    S +D Y+    +EG RGLW+G  P   R
Sbjct: 126 TGALAVAVAQPTDVVKVRFQAQARAGSGRRYQSTVDAYKTIAREEGFRGLWKGTSPNVAR 185

Query: 169 AAIVVGVELPVYDITKKHLILSGVLGDTILTHFVSSFTCGLAGALASNPVDVVRTRMMNQ 348
            AIV   EL  YD+ K  L+ + ++ D +  HF S+F  G    + ++PVDVV+TR MN 
Sbjct: 186 NAIVNCAELVTYDLIKDALLKANLMTDDLPCHFTSAFGAGFCTTVIASPVDVVKTRYMNS 245

Query: 349 RAIVGHVDLYKGTLDGILKMWKHEGFFALYKGFWPNWLRLGPWNIIFFITYEQLKR 516
                 +  Y       L M + EG  A YKGF P++LRLG WN++ F+TYEQLKR
Sbjct: 246 A-----LGQYSSAGHCALTMLQKEGPRAFYKGFMPSFLRLGSWNVVMFVTYEQLKR 296



 Score = 64.7 bits (156), Expect = 1e-10
 Identities = 50/178 (28%), Positives = 77/178 (43%), Gaps = 10/178 (5%)
 Frame = +1

Query: 10  ISSTIANPTDVLKIRMQAQG----------SLFQGSMIGSFIDIYQQEGTRGLWRGVVPT 159
           I+  I  P D  K+R+Q QG          S     ++ + + + + EG R L+ G+V  
Sbjct: 26  IADLITFPLDTAKVRLQIQGERQGPVRAAASAQYRGVLCTILTMVRTEGPRSLYSGLVAG 85

Query: 160 AQRAAIVVGVELPVYDITKKHLILSGVLGDTILTHFVSSFTCGLAGALASNPVDVVRTRM 339
            QR      V + +YD + K     G     I +  ++  T G      + P DVV+ R 
Sbjct: 86  LQRQMSFASVRIGLYD-SVKQFYTKGSEHAGIGSRLLAGSTTGALAVAVAQPTDVVKVRF 144

Query: 340 MNQRAIVGHVDLYKGTLDGILKMWKHEGFFALYKGFWPNWLRLGPWNIIFFITYEQLK 513
             Q A  G    Y+ T+D    + + EGF  L+KG  PN  R    N    +TY+ +K
Sbjct: 145 QAQ-ARAGSGRRYQSTVDAYKTIAREEGFRGLWKGTSPNVARNAIVNCAELVTYDLIK 201


>ref|NP_001003047.1| mitochondrial uncoupling protein 3 [Canis lupus familiaris].
          Length = 311

 Score =  134 bits (338), Expect = 1e-31
 Identities = 75/178 (42%), Positives = 104/178 (58%), Gaps = 6/178 (3%)
 Frame = +1

Query: 1   SGVISSTIANPTDVLKIRMQAQGSLFQGS------MIGSFIDIYQQEGTRGLWRGVVPTA 162
           +G ++ + A PTDV+K+R QA   L  GS       + ++  I ++EG RGLW+G +P  
Sbjct: 126 TGAMAVSCAQPTDVVKVRFQASIHLGAGSNRKYSGTMDAYRTIAREEGVRGLWKGTLPNI 185

Query: 163 QRAAIVVGVELPVYDITKKHLILSGVLGDTILTHFVSSFTCGLAGALASNPVDVVRTRMM 342
            R AIV   E+  YDI K+ L+   +L D    H +S+F  G    + ++PVDVV+TR M
Sbjct: 186 TRNAIVNCAEMVTYDIIKEKLLDYHLLTDNFPCHLISAFGAGFCATVVASPVDVVKTRYM 245

Query: 343 NQRAIVGHVDLYKGTLDGILKMWKHEGFFALYKGFWPNWLRLGPWNIIFFITYEQLKR 516
           N          Y   LD +LKM   EG  A YKGF P++LRLG WN++ F+TYEQLKR
Sbjct: 246 NSPP-----GQYCSPLDCMLKMVTQEGPTAFYKGFTPSFLRLGTWNVVMFVTYEQLKR 298



 Score = 66.6 bits (161), Expect = 4e-11
 Identities = 45/171 (26%), Positives = 73/171 (42%), Gaps = 10/171 (5%)
 Frame = +1

Query: 31  PTDVLKIRMQAQGS---------LFQGSMIGSFIDIYQQEGTRGLWRGVVPTAQRAAIVV 183
           P D  K+R+Q QG          +    ++G+ + + + EG R  + G+V   QR     
Sbjct: 33  PLDTAKVRLQIQGENQATQAARRIQYRGVLGTILTMVRTEGPRSPYNGLVAGLQRQMSFA 92

Query: 184 GVELPVYDITKKHLILSGVLGDTILTHFVSSFTCGLAGALASNPVDVVRTRMMNQRAI-V 360
            + + +YD  K+     G    +I T  ++  T G      + P DVV+ R      +  
Sbjct: 93  SIRIGLYDSVKQFYTPKGSDHSSITTRILAGCTTGAMAVSCAQPTDVVKVRFQASIHLGA 152

Query: 361 GHVDLYKGTLDGILKMWKHEGFFALYKGFWPNWLRLGPWNIIFFITYEQLK 513
           G    Y GT+D    + + EG   L+KG  PN  R    N    +TY+ +K
Sbjct: 153 GSNRKYSGTMDAYRTIAREEGVRGLWKGTLPNITRNAIVNCAEMVTYDIIK 203


>ref|XP_856284.1| PREDICTED: similar to Mitochondrial 2-oxoglutarate/malate carrier
           protein (OGCP) isoform 2 [Canis familiaris].
          Length = 263

 Score =  127 bits (318), Expect = 2e-29
 Identities = 71/178 (39%), Positives = 101/178 (56%), Gaps = 6/178 (3%)
 Frame = +1

Query: 1   SGVISSTIANPTDVLKIRMQAQGSLFQGSMIG------SFIDIYQQEGTRGLWRGVVPTA 162
           +G   + +  P +V  IRM A G L      G      + I I ++EG   LWRG +PT 
Sbjct: 78  AGATGAFVGTPAEVALIRMTADGRLPPDQRRGYKNVFNALIRIAREEGVPTLWRGCIPTM 137

Query: 163 QRAAIVVGVELPVYDITKKHLILSGVLGDTILTHFVSSFTCGLAGALASNPVDVVRTRMM 342
            RA +V   +L  Y  +K+ L+ SG   D IL HF +S   GL    AS PVD+V+TR+ 
Sbjct: 138 ARAVVVNAAQLASYSQSKQFLLDSGYFSDNILCHFCASMISGLVTTAASMPVDIVKTRIQ 197

Query: 343 NQRAIVGHVDLYKGTLDGILKMWKHEGFFALYKGFWPNWLRLGPWNIIFFITYEQLKR 516
           N R I G  + YK  LD ++K+ ++EGFF+L+KGF P + RLGP  ++ FI  EQ+ +
Sbjct: 198 NMRMIDGKPE-YKNGLDVLVKVVRYEGFFSLWKGFTPYYARLGPHTVLTFIFLEQMNK 254


>ref|XP_536607.1| PREDICTED: similar to Mitochondrial 2-oxoglutarate/malate carrier
           protein (OGCP) isoform 1 [Canis familiaris].
          Length = 314

 Score =  127 bits (318), Expect = 2e-29
 Identities = 71/178 (39%), Positives = 101/178 (56%), Gaps = 6/178 (3%)
 Frame = +1

Query: 1   SGVISSTIANPTDVLKIRMQAQGSLFQGSMIG------SFIDIYQQEGTRGLWRGVVPTA 162
           +G   + +  P +V  IRM A G L      G      + I I ++EG   LWRG +PT 
Sbjct: 129 AGATGAFVGTPAEVALIRMTADGRLPPDQRRGYKNVFNALIRIAREEGVPTLWRGCIPTM 188

Query: 163 QRAAIVVGVELPVYDITKKHLILSGVLGDTILTHFVSSFTCGLAGALASNPVDVVRTRMM 342
            RA +V   +L  Y  +K+ L+ SG   D IL HF +S   GL    AS PVD+V+TR+ 
Sbjct: 189 ARAVVVNAAQLASYSQSKQFLLDSGYFSDNILCHFCASMISGLVTTAASMPVDIVKTRIQ 248

Query: 343 NQRAIVGHVDLYKGTLDGILKMWKHEGFFALYKGFWPNWLRLGPWNIIFFITYEQLKR 516
           N R I G  + YK  LD ++K+ ++EGFF+L+KGF P + RLGP  ++ FI  EQ+ +
Sbjct: 249 NMRMIDGKPE-YKNGLDVLVKVVRYEGFFSLWKGFTPYYARLGPHTVLTFIFLEQMNK 305



 Score = 48.9 bits (115), Expect = 8e-06
 Identities = 41/177 (23%), Positives = 71/177 (40%), Gaps = 5/177 (2%)
 Frame = +1

Query: 1   SGVISSTIANPTDVLKIRMQAQG----SLFQGSMIGSFIDIYQQEGTRGLWRGVVPTAQR 168
           +G+ ++    P D++K RMQ  G    +    +   +   I + EG RG++ G+     R
Sbjct: 31  AGMGATVFVQPLDLVKNRMQLSGEGAKTREYKTSFHALTSILRAEGLRGIYTGLSAGLLR 90

Query: 169 AAIVVGVELPVYDITKKHLILSGVLGDTILTHFVSSFTCGLAGALASNPVDVVRTRM-MN 345
            A      L +Y +  + L  +       L   +   T G  GA    P +V   RM  +
Sbjct: 91  QATYTTTRLGIYTVLFERLTGADGTPPGFLLKALIGMTAGATGAFVGTPAEVALIRMTAD 150

Query: 346 QRAIVGHVDLYKGTLDGILKMWKHEGFFALYKGFWPNWLRLGPWNIIFFITYEQLKR 516
            R        YK   + ++++ + EG   L++G  P   R    N     +Y Q K+
Sbjct: 151 GRLPPDQRRGYKNVFNALIRIAREEGVPTLWRGCIPTMARAVVVNAAQLASYSQSKQ 207


>ref|NP_001003046.1| mitochondrial brown fat uncoupling protein 1 [Canis lupus
           familiaris].
          Length = 309

 Score =  114 bits (286), Expect = 1e-25
 Identities = 64/171 (37%), Positives = 95/171 (55%), Gaps = 6/171 (3%)
 Frame = +1

Query: 22  IANPTDVLKIRMQAQGSL------FQGSMIGSFIDIYQQEGTRGLWRGVVPTAQRAAIVV 183
           I  PT+V+K+R+QAQ  L      + G+   ++  I   EG  GLW+G  P   R  I+ 
Sbjct: 132 IGQPTEVVKVRLQAQSHLHGRKPRYTGTY-NAYRIIATTEGLTGLWKGTTPNLMRNVIIN 190

Query: 184 GVELPVYDITKKHLILSGVLGDTILTHFVSSFTCGLAGALASNPVDVVRTRMMNQRAIVG 363
             EL  YD+ K+ L+ + +L D +  HF+S+   G    + S+PVDVV+TR +N      
Sbjct: 191 CTELVTYDLMKEALVKNHLLADDLPCHFLSALVAGFCTTVLSSPVDVVKTRFVNSVP--- 247

Query: 364 HVDLYKGTLDGILKMWKHEGFFALYKGFWPNWLRLGPWNIIFFITYEQLKR 516
             + Y    +  + M   EG  A +KGF P++LRLG WN+I F+ +EQLKR
Sbjct: 248 --EQYTSVPNCAMTMLTKEGPLAFFKGFVPSFLRLGSWNVIMFVCFEQLKR 296



 Score = 56.6 bits (135), Expect = 4e-08
 Identities = 43/177 (24%), Positives = 75/177 (42%), Gaps = 9/177 (5%)
 Frame = +1

Query: 10  ISSTIANPTDVLKIRMQAQGSLFQGS---------MIGSFIDIYQQEGTRGLWRGVVPTA 162
           ++  I  P D  K+R+Q QG   QG          ++G+   + + EG + L+ G+    
Sbjct: 26  LADMITFPLDTAKVRLQIQGE-GQGQPPRAPRYRGVLGTVATLARTEGLQKLYSGLPAGL 84

Query: 163 QRAAIVVGVELPVYDITKKHLILSGVLGDTILTHFVSSFTCGLAGALASNPVDVVRTRMM 342
           QR      + + +YD  ++ L        ++ +   +    G A      P +VV+ R+ 
Sbjct: 85  QRQVGFASLRIGLYDSVREWLSPGQGAAASLGSRISAGVMTGGAAVFIGQPTEVVKVRLQ 144

Query: 343 NQRAIVGHVDLYKGTLDGILKMWKHEGFFALYKGFWPNWLRLGPWNIIFFITYEQLK 513
            Q  + G    Y GT +    +   EG   L+KG  PN +R    N    +TY+ +K
Sbjct: 145 AQSHLHGRKPRYTGTYNAYRIIATTEGLTGLWKGTTPNLMRNVIINCTELVTYDLMK 201


  Database: RefSeq49_CP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 18,874,504
  Number of sequences in database:  33,336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33336
Number of Hits to DB: 36,954,551
Number of extensions: 919489
Number of successful extensions: 3012
Number of sequences better than 1.0e-05: 68
Number of HSP's gapped: 2817
Number of HSP's successfully gapped: 108
Length of query: 338
Length of database: 18,874,504
Length adjustment: 103
Effective length of query: 235
Effective length of database: 15,440,896
Effective search space: 3628610560
Effective search space used: 3628610560
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)

Search to RefSeqSP_Rel49

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= HTMT1_0029_D11
         (1015 letters)

Database: RefSeq49_SP.fasta 
           24,897 sequences; 11,343,932 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|XP_003360489.1| PREDICTED: brain mitochondrial carrier prote...   356   1e-98
Alignment   gi|XP_003135426.2| PREDICTED: brain mitochondrial carrier prote...   356   1e-98
Alignment   gi|XP_003361343.1| PREDICTED: brain mitochondrial carrier prote...   304   6e-83
Alignment   gi|NP_999214.1| mitochondrial uncoupling protein 3 [Sus scrofa].     137   1e-32
Alignment   gi|NP_999454.1| mitochondrial uncoupling protein 2 [Sus scrofa].     134   6e-32
Alignment   gi|XP_003131953.2| PREDICTED: LOW QUALITY PROTEIN: mitochondria...   126   2e-29
Alignment   gi|NP_001182044.1| mitochondrial uncoupling protein 4 [Sus scro...   123   2e-28
Alignment   gi|XP_003127686.1| PREDICTED: solute carrier family 25 member 3...    87   2e-17
Alignment   gi|NP_001186292.1| calcium-binding mitochondrial carrier protei...    79   3e-15
Alignment   gi|NP_001230286.1| solute carrier family 25, member 35 [Sus scr...    77   2e-14

>ref|XP_003360489.1| PREDICTED: brain mitochondrial carrier protein 1-like isoform 2
           [Sus scrofa].
          Length = 325

 Score =  356 bits (913), Expect = 1e-98
 Identities = 175/175 (100%), Positives = 175/175 (100%)
 Frame = +1

Query: 1   SGVISSTIANPTDVLKIRMQAQGSLFQGSMIGSFIDIYQQEGTRGLWRGVVPTAQRAAIV 180
           SGVISSTIANPTDVLKIRMQAQGSLFQGSMIGSFIDIYQQEGTRGLWRGVVPTAQRAAIV
Sbjct: 151 SGVISSTIANPTDVLKIRMQAQGSLFQGSMIGSFIDIYQQEGTRGLWRGVVPTAQRAAIV 210

Query: 181 VGVELPVYDITKKHLILSGVLGDTILTHFVSSFTCGLAGALASNPVDVVRTRMMNQRAIV 360
           VGVELPVYDITKKHLILSGVLGDTILTHFVSSFTCGLAGALASNPVDVVRTRMMNQRAIV
Sbjct: 211 VGVELPVYDITKKHLILSGVLGDTILTHFVSSFTCGLAGALASNPVDVVRTRMMNQRAIV 270

Query: 361 GHVDLYKGTLDGILKMWKHEGFFALYKGFWPNWLRLGPWNIIFFITYEQLKRLQI 525
           GHVDLYKGTLDGILKMWKHEGFFALYKGFWPNWLRLGPWNIIFFITYEQLKRLQI
Sbjct: 271 GHVDLYKGTLDGILKMWKHEGFFALYKGFWPNWLRLGPWNIIFFITYEQLKRLQI 325



 Score = 59.3 bits (142), Expect = 3e-09
 Identities = 41/163 (25%), Positives = 78/163 (47%), Gaps = 13/163 (7%)
 Frame = +1

Query: 4   GVISSTIAN----PTDVLKIRMQAQGSLFQ--------GSMIGSFIDIYQQEGTRGLWRG 147
           G ++S +A     P D+ K R+Q QG              M  +   IY++EG   L+ G
Sbjct: 47  GGLASIVAEFGTFPVDLTKTRLQVQGQSIDVRFKEIKYRGMFHALFRIYKEEGVLALYSG 106

Query: 148 VVPTAQRAAIVVGVELPVYDITKKHLILSGVLGDTILTHFVSSFTCGLAGALASNPVDVV 327
           + P   R A    +++ +Y  + K L +  +  +T+L + +     G+  +  +NP DV+
Sbjct: 107 IAPALLRQASYGTIKIGIYQ-SLKRLFVERLEDETLLINMICGVVSGVISSTIANPTDVL 165

Query: 328 RTRMMNQRAIVGHVDLYKGTLDG-ILKMWKHEGFFALYKGFWP 453
           + RM  Q +      L++G++ G  + +++ EG   L++G  P
Sbjct: 166 KIRMQAQGS------LFQGSMIGSFIDIYQQEGTRGLWRGVVP 202


>ref|XP_003135426.2| PREDICTED: brain mitochondrial carrier protein 1-like isoform 1
           [Sus scrofa].
          Length = 325

 Score =  356 bits (913), Expect = 1e-98
 Identities = 175/175 (100%), Positives = 175/175 (100%)
 Frame = +1

Query: 1   SGVISSTIANPTDVLKIRMQAQGSLFQGSMIGSFIDIYQQEGTRGLWRGVVPTAQRAAIV 180
           SGVISSTIANPTDVLKIRMQAQGSLFQGSMIGSFIDIYQQEGTRGLWRGVVPTAQRAAIV
Sbjct: 151 SGVISSTIANPTDVLKIRMQAQGSLFQGSMIGSFIDIYQQEGTRGLWRGVVPTAQRAAIV 210

Query: 181 VGVELPVYDITKKHLILSGVLGDTILTHFVSSFTCGLAGALASNPVDVVRTRMMNQRAIV 360
           VGVELPVYDITKKHLILSGVLGDTILTHFVSSFTCGLAGALASNPVDVVRTRMMNQRAIV
Sbjct: 211 VGVELPVYDITKKHLILSGVLGDTILTHFVSSFTCGLAGALASNPVDVVRTRMMNQRAIV 270

Query: 361 GHVDLYKGTLDGILKMWKHEGFFALYKGFWPNWLRLGPWNIIFFITYEQLKRLQI 525
           GHVDLYKGTLDGILKMWKHEGFFALYKGFWPNWLRLGPWNIIFFITYEQLKRLQI
Sbjct: 271 GHVDLYKGTLDGILKMWKHEGFFALYKGFWPNWLRLGPWNIIFFITYEQLKRLQI 325



 Score = 59.3 bits (142), Expect = 3e-09
 Identities = 41/163 (25%), Positives = 78/163 (47%), Gaps = 13/163 (7%)
 Frame = +1

Query: 4   GVISSTIAN----PTDVLKIRMQAQGSLFQ--------GSMIGSFIDIYQQEGTRGLWRG 147
           G ++S +A     P D+ K R+Q QG              M  +   IY++EG   L+ G
Sbjct: 47  GGLASIVAEFGTFPVDLTKTRLQVQGQSIDVRFKEIKYRGMFHALFRIYKEEGVLALYSG 106

Query: 148 VVPTAQRAAIVVGVELPVYDITKKHLILSGVLGDTILTHFVSSFTCGLAGALASNPVDVV 327
           + P   R A    +++ +Y  + K L +  +  +T+L + +     G+  +  +NP DV+
Sbjct: 107 IAPALLRQASYGTIKIGIYQ-SLKRLFVERLEDETLLINMICGVVSGVISSTIANPTDVL 165

Query: 328 RTRMMNQRAIVGHVDLYKGTLDG-ILKMWKHEGFFALYKGFWP 453
           + RM  Q +      L++G++ G  + +++ EG   L++G  P
Sbjct: 166 KIRMQAQGS------LFQGSMIGSFIDIYQQEGTRGLWRGVVP 202


>ref|XP_003361343.1| PREDICTED: brain mitochondrial carrier protein 1-like [Sus scrofa].
          Length = 310

 Score =  304 bits (778), Expect = 6e-83
 Identities = 156/175 (89%), Positives = 157/175 (89%)
 Frame = +1

Query: 1   SGVISSTIANPTDVLKIRMQAQGSLFQGSMIGSFIDIYQQEGTRGLWRGVVPTAQRAAIV 180
           SGVISSTIANPTDVLKIRMQAQGSLFQGSMIGSFIDIYQQEGTRGLWR           V
Sbjct: 151 SGVISSTIANPTDVLKIRMQAQGSLFQGSMIGSFIDIYQQEGTRGLWR-----------V 199

Query: 181 VGVELPVYDITKKHLILSGVLGDTILTHFVSSFTCGLAGALASNPVDVVRTRMMNQRAIV 360
             + L    ITKKHLILSGVLGDTILTHFVSSFTCGLAGALASNPVDVVRTRMMNQRAIV
Sbjct: 200 STLSL----ITKKHLILSGVLGDTILTHFVSSFTCGLAGALASNPVDVVRTRMMNQRAIV 255

Query: 361 GHVDLYKGTLDGILKMWKHEGFFALYKGFWPNWLRLGPWNIIFFITYEQLKRLQI 525
           GHVDLYKGTLDGILKMWKHEGFFALYKGFWPNWLRLGPWNIIFFITYEQLKRLQI
Sbjct: 256 GHVDLYKGTLDGILKMWKHEGFFALYKGFWPNWLRLGPWNIIFFITYEQLKRLQI 310



 Score = 55.8 bits (133), Expect = 4e-08
 Identities = 39/159 (24%), Positives = 76/159 (47%), Gaps = 13/159 (8%)
 Frame = +1

Query: 4   GVISSTIAN----PTDVLKIRMQAQGSLFQ--------GSMIGSFIDIYQQEGTRGLWRG 147
           G ++S +A     P D+ K R+Q QG              M  +   IY++EG   L+ G
Sbjct: 47  GGLASIVAEFGTFPVDLTKTRLQVQGQSIDVRFKEIKYRGMFHALFRIYKEEGVLALYSG 106

Query: 148 VVPTAQRAAIVVGVELPVYDITKKHLILSGVLGDTILTHFVSSFTCGLAGALASNPVDVV 327
           + P   R A    +++ +Y  + K L +  +  +T+L + +     G+  +  +NP DV+
Sbjct: 107 IAPALLRQASYGTIKIGIYQ-SLKRLFVERLEDETLLINMICGVVSGVISSTIANPTDVL 165

Query: 328 RTRMMNQRAIVGHVDLYKGTLDG-ILKMWKHEGFFALYK 441
           + RM  Q +      L++G++ G  + +++ EG   L++
Sbjct: 166 KIRMQAQGS------LFQGSMIGSFIDIYQQEGTRGLWR 198


>ref|NP_999214.1| mitochondrial uncoupling protein 3 [Sus scrofa].
          Length = 308

 Score =  137 bits (344), Expect = 1e-32
 Identities = 74/179 (41%), Positives = 108/179 (60%), Gaps = 7/179 (3%)
 Frame = +1

Query: 1   SGVISSTIANPTDVLKIRMQAQ-------GSLFQGSMIGSFIDIYQQEGTRGLWRGVVPT 159
           +G ++ T A PTDV+K+R QA           + G+M  ++  I ++EG RGLW+G++P 
Sbjct: 123 TGAMAVTCAQPTDVVKVRFQASIHAGPRSNRKYSGTM-DAYRTIAREEGVRGLWKGILPN 181

Query: 160 AQRAAIVVGVELPVYDITKKHLILSGVLGDTILTHFVSSFTCGLAGALASNPVDVVRTRM 339
             R AIV   E+  YD+ K+ ++   +L D +  HFVS+F  G    + ++PVDVV+TR 
Sbjct: 182 ITRNAIVNCAEMVTYDVIKEKVLDYHLLTDNLPCHFVSAFGAGFCATVVASPVDVVKTRY 241

Query: 340 MNQRAIVGHVDLYKGTLDGILKMWKHEGFFALYKGFWPNWLRLGPWNIIFFITYEQLKR 516
           MN          Y+  LD +LKM   EG  A YKGF P++LRLG WN++ F++YEQLKR
Sbjct: 242 MNSPP-----GQYQNPLDCMLKMVTQEGPTAFYKGFTPSFLRLGSWNVVMFVSYEQLKR 295



 Score = 66.6 bits (161), Expect = 2e-11
 Identities = 46/168 (27%), Positives = 73/168 (43%), Gaps = 7/168 (4%)
 Frame = +1

Query: 31  PTDVLKIRMQAQG------SLFQGSMIGSFIDIYQQEGTRGLWRGVVPTAQRAAIVVGVE 192
           P D  K+R+Q QG      S     ++G+ + + + EG R  + G+V   QR      + 
Sbjct: 33  PLDTAKVRLQIQGENQAARSAQYRGVLGTILTMVRNEGPRSPYNGLVAGLQRQMSFASIR 92

Query: 193 LPVYDITKKHLILSGVLGDTILTHFVSSFTCGLAGALASNPVDVVRTRMM-NQRAIVGHV 369
           + +YD  K+     G    +I T  ++  T G      + P DVV+ R   +  A     
Sbjct: 93  IGLYDSVKQLYTPKGSDHSSITTRILAGCTTGAMAVTCAQPTDVVKVRFQASIHAGPRSN 152

Query: 370 DLYKGTLDGILKMWKHEGFFALYKGFWPNWLRLGPWNIIFFITYEQLK 513
             Y GT+D    + + EG   L+KG  PN  R    N    +TY+ +K
Sbjct: 153 RKYSGTMDAYRTIAREEGVRGLWKGILPNITRNAIVNCAEMVTYDVIK 200


>ref|NP_999454.1| mitochondrial uncoupling protein 2 [Sus scrofa].
          Length = 309

 Score =  134 bits (338), Expect = 6e-32
 Identities = 75/180 (41%), Positives = 103/180 (57%), Gaps = 8/180 (4%)
 Frame = +1

Query: 1   SGVISSTIANPTDVLKIRMQAQGSLFQGSMIGSFIDIYQ----QEGTRGLWRGVVPTAQR 168
           +G ++  +A PTDV+K+R QAQ     G    S +D Y+    +EG RGLW+G  P   R
Sbjct: 126 TGALAVAVAQPTDVVKVRFQAQARAGGGRRYRSTVDAYKTIAREEGLRGLWKGTSPNVAR 185

Query: 169 AAIVVGVELPVYDITKKHLILSGVLGDTILTHFVSSFTCGLAGALASNPVDVVRTRMMN- 345
            AIV   EL  YD+ K  L+ + ++ D +  HF S+F  G    + ++PVDVV+TR MN 
Sbjct: 186 NAIVNCAELVTYDLIKDTLLKADLMTDDLPCHFTSAFGAGFCTTVIASPVDVVKTRYMNS 245

Query: 346 ---QRAIVGHVDLYKGTLDGILKMWKHEGFFALYKGFWPNWLRLGPWNIIFFITYEQLKR 516
              Q +  GH           L M + EG  A YKGF P++LRLG WN++ F+TYEQLKR
Sbjct: 246 APGQYSSAGHC---------ALTMLQKEGPRAFYKGFTPSFLRLGSWNVVMFVTYEQLKR 296



 Score = 69.7 bits (169), Expect = 2e-12
 Identities = 51/178 (28%), Positives = 78/178 (43%), Gaps = 10/178 (5%)
 Frame = +1

Query: 10  ISSTIANPTDVLKIRMQAQG----------SLFQGSMIGSFIDIYQQEGTRGLWRGVVPT 159
           I+  I  P D  K+R+Q QG          S     ++G+ + + + EG R L+ G+V  
Sbjct: 26  IADLITFPLDTAKVRLQIQGERRGPVQAAASAQYRGVLGTILTMVRNEGPRSLYNGLVAG 85

Query: 160 AQRAAIVVGVELPVYDITKKHLILSGVLGDTILTHFVSSFTCGLAGALASNPVDVVRTRM 339
            QR      V + +YD + KH    G     I +  ++  T G      + P DVV+ R 
Sbjct: 86  LQRQMSFASVRIGLYD-SVKHFYTKGSEHAGIGSRLLAGSTTGALAVAVAQPTDVVKVRF 144

Query: 340 MNQRAIVGHVDLYKGTLDGILKMWKHEGFFALYKGFWPNWLRLGPWNIIFFITYEQLK 513
             Q A  G    Y+ T+D    + + EG   L+KG  PN  R    N    +TY+ +K
Sbjct: 145 QAQ-ARAGGGRRYRSTVDAYKTIAREEGLRGLWKGTSPNVARNAIVNCAELVTYDLIK 201


>ref|XP_003131953.2| PREDICTED: LOW QUALITY PROTEIN: mitochondrial 2-oxoglutarate/malate
           carrier protein [Sus scrofa].
          Length = 314

 Score =  126 bits (316), Expect = 2e-29
 Identities = 70/178 (39%), Positives = 100/178 (56%), Gaps = 6/178 (3%)
 Frame = +1

Query: 1   SGVISSTIANPTDVLKIRMQAQGSLFQGSMIG------SFIDIYQQEGTRGLWRGVVPTA 162
           +G   + +  P +V  IRM A G L      G      + I I ++EG   LWRG +PT 
Sbjct: 129 AGATGAFVGTPAEVALIRMTADGRLPPDQRRGYKNVFDALIRIVREEGVPTLWRGCIPTM 188

Query: 163 QRAAIVVGVELPVYDITKKHLILSGVLGDTILTHFVSSFTCGLAGALASNPVDVVRTRMM 342
            RA +V   +L  Y  +K+ L+ SG   D IL HF +S   GL    AS PVD+ +TR+ 
Sbjct: 189 ARAVVVNAAQLASYSQSKQFLLDSGYFSDNILCHFCASMISGLVTTAASMPVDIAKTRIQ 248

Query: 343 NQRAIVGHVDLYKGTLDGILKMWKHEGFFALYKGFWPNWLRLGPWNIIFFITYEQLKR 516
           N R I G  + YK  LD ++K+ ++EGFF+L+KGF P + RLGP  ++ FI  EQ+ +
Sbjct: 249 NMRTIDGKPE-YKNGLDVLVKVIRYEGFFSLWKGFTPYYARLGPHTVLTFIFLEQMNK 305



 Score = 50.8 bits (120), Expect = 1e-06
 Identities = 42/177 (23%), Positives = 71/177 (40%), Gaps = 5/177 (2%)
 Frame = +1

Query: 1   SGVISSTIANPTDVLKIRMQAQG----SLFQGSMIGSFIDIYQQEGTRGLWRGVVPTAQR 168
           +G+ ++    P D++K RMQ  G    +    +   +   I + EG RG++ G+     R
Sbjct: 31  AGMGATVFVQPLDLVKNRMQLSGEGAKTREYKTSFHALTSILRAEGLRGIYTGLSAGLLR 90

Query: 169 AAIVVGVELPVYDITKKHLILSGVLGDTILTHFVSSFTCGLAGALASNPVDVVRTRM-MN 345
            A      L +Y +  + L  +       L   +   T G  GA    P +V   RM  +
Sbjct: 91  QATYTTTRLGIYTVLFERLTGADGTPPGFLLKALIGMTAGATGAFVGTPAEVALIRMTAD 150

Query: 346 QRAIVGHVDLYKGTLDGILKMWKHEGFFALYKGFWPNWLRLGPWNIIFFITYEQLKR 516
            R        YK   D ++++ + EG   L++G  P   R    N     +Y Q K+
Sbjct: 151 GRLPPDQRRGYKNVFDALIRIVREEGVPTLWRGCIPTMARAVVVNAAQLASYSQSKQ 207


>ref|NP_001182044.1| mitochondrial uncoupling protein 4 [Sus scrofa].
          Length = 328

 Score =  123 bits (308), Expect = 2e-28
 Identities = 68/165 (41%), Positives = 101/165 (61%), Gaps = 9/165 (5%)
 Frame = +1

Query: 1   SGVISSTIANPTDVLKIRMQAQGSL--------FQGSMIGSFIDIYQQEGTRGLWRGVVP 156
           +GV+   +ANPTD++K++MQ +G          F+G +  +F  I  + G RGLW G VP
Sbjct: 137 AGVVGQFLANPTDLVKVQMQMEGKRKLEGKPLRFRG-VHHAFAKILPEGGVRGLWAGWVP 195

Query: 157 TAQRAAIVVGVELPVYDITKKHLILSGVLGDTILTHFVSSFTCGLAGALASNPVDVVRTR 336
             QRAA+V   +L  YD  K +L+L+  L D I+TH +SS   GL  ++   P DV+++R
Sbjct: 196 NIQRAALVNMGDLTTYDTVKHYLVLNTPLEDNIMTHGLSSLCSGLVASILGTPADVIKSR 255

Query: 337 MMNQ-RAIVGHVDLYKGTLDGILKMWKHEGFFALYKGFWPNWLRL 468
           +MNQ R   G   LYK + D +++  + EGF +LYKGF P+WLR+
Sbjct: 256 IMNQPRDKQGRGLLYKSSTDCLVQAVQGEGFMSLYKGFLPSWLRM 300



 Score = 55.8 bits (133), Expect = 4e-08
 Identities = 44/178 (24%), Positives = 77/178 (43%), Gaps = 17/178 (9%)
 Frame = +1

Query: 31  PTDVLKIRMQAQG--------------SLFQGSMIGSFIDIYQQEGTRGLWRGVVPTAQR 168
           P D+ K R+Q QG              +L++G M+ + + I Q+EG   LW+GV P   R
Sbjct: 39  PLDLTKTRLQIQGEAALARLGHGAREAALYRG-MVRTALGIVQEEGFLKLWQGVTPAIYR 97

Query: 169 AAIVVGVELPVYDITKKHLILSGV-LGDTILTHFVSSFTCGLAGALASNPVDVVRTRMM- 342
             +  G  +  Y+  ++ +   G      +    +     G+ G   +NP D+V+ +M  
Sbjct: 98  HIVYSGGRMVTYEHLREVVFGKGEDKHYPLWKSVIGGMMAGVVGQFLANPTDLVKVQMQM 157

Query: 343 -NQRAIVGHVDLYKGTLDGILKMWKHEGFFALYKGFWPNWLRLGPWNIIFFITYEQLK 513
             +R + G    ++G      K+    G   L+ G+ PN  R    N+    TY+ +K
Sbjct: 158 EGKRKLEGKPLRFRGVHHAFAKILPEGGVRGLWAGWVPNIQRAALVNMGDLTTYDTVK 215


>ref|XP_003127686.1| PREDICTED: solute carrier family 25 member 34-like [Sus scrofa].
          Length = 304

 Score = 86.7 bits (213), Expect = 2e-17
 Identities = 56/183 (30%), Positives = 92/183 (50%), Gaps = 10/183 (5%)
 Frame = +1

Query: 1   SGVISSTIANPTDVLKIRMQAQ--GSLFQG------SMIGSFIDIYQQEGTRGLWRGVVP 156
           +G + + + +P  ++K ++QAQ   ++  G      S++G+   I++Q+G  GLWRGV  
Sbjct: 113 AGALGAFVGSPAYLVKTQLQAQTVAAMAVGHQHHHQSVLGALETIWRQQGLAGLWRGVGG 172

Query: 157 TAQRAAIVVGVELPVYDITKKHLILSGVLG-DTILTHFVSSFTCGLAGALASNPVDVVRT 333
              R  +    +L  +   K  +     L  D+ L          +A      P DVV T
Sbjct: 173 AVPRVMVGSAAQLATFASAKAWVQEQQWLPEDSWLVALAGGMISSVAVVAVMTPFDVVST 232

Query: 334 RMMNQRAI-VGHVDLYKGTLDGILKMWKHEGFFALYKGFWPNWLRLGPWNIIFFITYEQL 510
           R+ NQ     G   LY G  D ++K+W+ EG  ALYKG  P +LRLGP  I+  + +++L
Sbjct: 233 RLYNQPVDGAGRGQLYGGLTDCLVKIWRQEGPLALYKGLGPAYLRLGPHTILSMLFWDEL 292

Query: 511 KRL 519
           ++L
Sbjct: 293 RKL 295


>ref|NP_001186292.1| calcium-binding mitochondrial carrier protein SCaMC-1-like [Sus
           scrofa].
          Length = 477

 Score = 79.3 bits (194), Expect = 3e-15
 Identities = 58/172 (33%), Positives = 78/172 (45%), Gaps = 1/172 (0%)
 Frame = +1

Query: 1   SGVISSTIANPTDVLKIRMQAQGSLFQGSMI-GSFIDIYQQEGTRGLWRGVVPTAQRAAI 177
           +G +S T   P D LK+ MQ  GS  +   I G F  + ++ G R LWRG      + A 
Sbjct: 204 AGAVSRTSTAPLDRLKVMMQVHGSKSEKMNIYGGFRQMVKEGGIRSLWRGNGTNVIKIAP 263

Query: 178 VVGVELPVYDITKKHLILSGVLGDTILTHFVSSFTCGLAGALASNPVDVVRTRMMNQRAI 357
              V+   Y+  KK L   G    T    F+S    G        P++V++TR+      
Sbjct: 264 ETAVKFWAYEQYKKLLTEEGQKVGTF-ERFISGSMAGATAQTFIYPMEVLKTRLA----- 317

Query: 358 VGHVDLYKGTLDGILKMWKHEGFFALYKGFWPNWLRLGPWNIIFFITYEQLK 513
           VG    Y G  D   K+ KHEG  A YKG+ PN L + P+  I    YE LK
Sbjct: 318 VGKTGQYSGIFDCAKKILKHEGMGAFYKGYVPNLLGIIPYAGIDLAVYELLK 369



 Score = 66.2 bits (160), Expect = 3e-11
 Identities = 49/176 (27%), Positives = 79/176 (44%), Gaps = 4/176 (2%)
 Frame = +1

Query: 1   SGVISSTIANPTDVLKIRMQAQGSLFQGSMIGSFIDIYQQEGTRGLWRGVVPTAQRAAIV 180
           +G  + T   P +VLK R+    +     +      I + EG    ++G VP        
Sbjct: 298 AGATAQTFIYPMEVLKTRLAVGKTGQYSGIFDCAKKILKHEGMGAFYKGYVPNLLGIIPY 357

Query: 181 VGVELPVYDITKKHLILSGVLGDTILTHFVSSFTCGL----AGALASNPVDVVRTRMMNQ 348
            G++L VY++ K H  L     D++    +    CG      G LAS P+ +VRTRM  Q
Sbjct: 358 AGIDLAVYELLKSHW-LDNFAKDSVNPGVMVLLGCGALSSTCGQLASYPLALVRTRMQAQ 416

Query: 349 RAIVGHVDLYKGTLDGILKMWKHEGFFALYKGFWPNWLRLGPWNIIFFITYEQLKR 516
             + G   L    L    ++   EG   LY+G  PN++++ P   I ++ YE +K+
Sbjct: 417 AMVEGAPQLNMVGL--FRRIISKEGIPGLYRGITPNFMKVLPAVGISYVVYENMKQ 470


>ref|NP_001230286.1| solute carrier family 25, member 35 [Sus scrofa].
          Length = 318

 Score = 77.0 bits (188), Expect = 2e-14
 Identities = 54/184 (29%), Positives = 88/184 (47%), Gaps = 11/184 (5%)
 Frame = +1

Query: 1   SGVISSTIANPTDVLKIRMQAQGSL---------FQGSMIGSFIDIYQQEGTRGLWRGVV 153
           +GV+ + + +P  ++K  +QAQ +           QG M  +   I Q+ G  GLWRG +
Sbjct: 130 AGVMGAYLGSPIYMVKTHLQAQAASEIAVGHQYKHQG-MFQALTKIGQKHGLVGLWRGAL 188

Query: 154 PTAQRAAIVVGVELPVYDITKKHLILSGVLG-DTILTHFVSSFTCGLAGALASNPVDVVR 330
               R  +    +L  +  TK  +    +    +      ++   G+A  LA  P DVV 
Sbjct: 189 GGLPRVIVGSSTQLCTFSSTKDLMTQWEIFPPQSWKVALAAAMVSGIAVVLAMTPFDVVS 248

Query: 331 TRMMNQRAIV-GHVDLYKGTLDGILKMWKHEGFFALYKGFWPNWLRLGPWNIIFFITYEQ 507
           TR+ NQ     G   +Y+G LD +L+  + EG F +YKG   ++ RLGP  I+    ++Q
Sbjct: 249 TRLYNQPTDAQGKGLMYRGLLDALLQTARTEGIFGMYKGLGASYFRLGPHTILSLFFWDQ 308

Query: 508 LKRL 519
           L+ L
Sbjct: 309 LRML 312



 Score = 51.2 bits (121), Expect = 9e-07
 Identities = 38/151 (25%), Positives = 68/151 (45%), Gaps = 12/151 (7%)
 Frame = +1

Query: 28  NPTDVLKIRMQAQGSL--------FQGSMIGSFIDIYQQEGTRGLWRGVVPTAQRAAIVV 183
           NP +V+K RMQ QG L           ++  +FI I + +G   L +G+ P      ++ 
Sbjct: 36  NPLEVVKTRMQLQGELQAPGTYQRHYRNVFHAFITIGRVDGLAALQKGLAPALLYQFLMN 95

Query: 184 GVELPVYDITKKHLILSGVLGD-TILTHFVSSFTCGLAGALASNPVDVVRTRMMNQRA-- 354
           G+ L  Y + +    L    G  + +    +    G+ GA   +P+ +V+T +  Q A  
Sbjct: 96  GIRLGTYGLAEAGGYLHTAEGTLSPVRSAAAGALAGVMGAYLGSPIYMVKTHLQAQAASE 155

Query: 355 -IVGHVDLYKGTLDGILKMWKHEGFFALYKG 444
             VGH   ++G    + K+ +  G   L++G
Sbjct: 156 IAVGHQYKHQGMFQALTKIGQKHGLVGLWRG 186


  Database: RefSeq49_SP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 11,343,932
  Number of sequences in database:  24,897
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 24897
Number of Hits to DB: 23,703,602
Number of extensions: 727773
Number of successful extensions: 1737
Number of sequences better than 1.0e-05: 36
Number of HSP's gapped: 1640
Number of HSP's successfully gapped: 54
Length of query: 338
Length of database: 11,343,932
Length adjustment: 100
Effective length of query: 238
Effective length of database: 8,854,232
Effective search space: 2107307216
Effective search space used: 2107307216
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)

Animal-Genome cDNA HTMT1_0029_D11

Search to RefSeqBP_Rel49

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= HTMT1_0029_D11
         (1015 letters)

Database: RefSeq49_BP.fasta 
           33,088 sequences; 17,681,374 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_001039610.1| brain mitochondrial carrier protein 1 [Bos t...   352   3e-97
Alignment   gi|NP_001092365.1| kidney mitochondrial carrier protein 1 [Bos ...   292   4e-79
Alignment   gi|XP_002705973.1| PREDICTED: solute carrier family 25 (mitocho...   262   4e-70
Alignment   gi|XP_002690360.1| PREDICTED: solute carrier family 25, member ...   213   3e-55
Alignment   gi|XP_001252633.2| PREDICTED: solute carrier family 25, member ...   213   3e-55
Alignment   gi|NP_001193123.1| mitochondrial uncoupling protein 4 [Bos taur...   144   2e-34
Alignment   gi|XP_002697311.1| PREDICTED: solute carrier family 25, member ...   144   2e-34
Alignment   gi|NP_776635.1| mitochondrial uncoupling protein 3 [Bos taurus].     137   2e-32
Alignment   gi|NP_001028783.1| mitochondrial uncoupling protein 2 [Bos taur...   133   3e-31
Alignment   gi|NP_777096.1| mitochondrial 2-oxoglutarate/malate carrier pro...   127   2e-29

>ref|NP_001039610.1| brain mitochondrial carrier protein 1 [Bos taurus].
          Length = 325

 Score =  352 bits (903), Expect = 3e-97
 Identities = 172/175 (98%), Positives = 174/175 (99%)
 Frame = +1

Query: 1   SGVISSTIANPTDVLKIRMQAQGSLFQGSMIGSFIDIYQQEGTRGLWRGVVPTAQRAAIV 180
           SGVISS IANPTDVLKIRMQAQGSLFQGSMIGSFIDIYQQEGTRGLWRGVVPTAQRAAIV
Sbjct: 151 SGVISSAIANPTDVLKIRMQAQGSLFQGSMIGSFIDIYQQEGTRGLWRGVVPTAQRAAIV 210

Query: 181 VGVELPVYDITKKHLILSGVLGDTILTHFVSSFTCGLAGALASNPVDVVRTRMMNQRAIV 360
           VGVELPVYDITKKHLILSG++GDTILTHFVSSFTCGLAGALASNPVDVVRTRMMNQRAIV
Sbjct: 211 VGVELPVYDITKKHLILSGLMGDTILTHFVSSFTCGLAGALASNPVDVVRTRMMNQRAIV 270

Query: 361 GHVDLYKGTLDGILKMWKHEGFFALYKGFWPNWLRLGPWNIIFFITYEQLKRLQI 525
           GHVDLYKGTLDGILKMWKHEGFFALYKGFWPNWLRLGPWNIIFFITYEQLKRLQI
Sbjct: 271 GHVDLYKGTLDGILKMWKHEGFFALYKGFWPNWLRLGPWNIIFFITYEQLKRLQI 325



 Score = 59.3 bits (142), Expect = 5e-09
 Identities = 41/163 (25%), Positives = 78/163 (47%), Gaps = 13/163 (7%)
 Frame = +1

Query: 4   GVISSTIAN----PTDVLKIRMQAQGSLFQ--------GSMIGSFIDIYQQEGTRGLWRG 147
           G ++S +A     P D+ K R+Q QG              M  +   IY++EG   L+ G
Sbjct: 47  GGLASIVAEFGTFPVDLTKTRLQVQGQSIDVRFKEIKYRGMFHALFRIYKEEGVLALYSG 106

Query: 148 VVPTAQRAAIVVGVELPVYDITKKHLILSGVLGDTILTHFVSSFTCGLAGALASNPVDVV 327
           + P   R A    +++ +Y  + K L +  +  +T+L + +     G+  +  +NP DV+
Sbjct: 107 IAPALLRQASYGTIKIGIYQ-SLKRLFVERLEDETLLINMICGVVSGVISSAIANPTDVL 165

Query: 328 RTRMMNQRAIVGHVDLYKGTLDG-ILKMWKHEGFFALYKGFWP 453
           + RM  Q +      L++G++ G  + +++ EG   L++G  P
Sbjct: 166 KIRMQAQGS------LFQGSMIGSFIDIYQQEGTRGLWRGVVP 202


>ref|NP_001092365.1| kidney mitochondrial carrier protein 1 [Bos taurus].
          Length = 291

 Score =  292 bits (747), Expect = 4e-79
 Identities = 142/176 (80%), Positives = 158/176 (89%), Gaps = 1/176 (0%)
 Frame = +1

Query: 1   SGVISSTIANPTDVLKIRMQAQGSLFQGSMIGSFIDIYQQEGTRGLWRGVVPTAQRAAIV 180
           SGVISS+IANPTDVLKIRMQAQ S  QG MIG+FI+IYQQEGTRGLW+GV  TAQRAAIV
Sbjct: 116 SGVISSSIANPTDVLKIRMQAQSSTLQGGMIGNFINIYQQEGTRGLWKGVSLTAQRAAIV 175

Query: 181 VGVELPVYDITKKHLILSGVLGDTILTHFVSSFTCGLAGALASNPVDVVRTRMMNQRAI- 357
           VGVELPVYD+TKKHLILSG++GDT+ THF+SSFTCGLAGALASNPVDVVRTRMMNQR + 
Sbjct: 176 VGVELPVYDLTKKHLILSGLMGDTVYTHFLSSFTCGLAGALASNPVDVVRTRMMNQRVLR 235

Query: 358 VGHVDLYKGTLDGILKMWKHEGFFALYKGFWPNWLRLGPWNIIFFITYEQLKRLQI 525
            G    YKGTLD +L+ WK+EGFFALYKGFWPNWLRLGPWNIIFF+ YEQLK+L +
Sbjct: 236 DGKCPGYKGTLDCLLQTWKNEGFFALYKGFWPNWLRLGPWNIIFFVAYEQLKKLDL 291


>ref|XP_002705973.1| PREDICTED: solute carrier family 25 (mitochondrial carrier, brain),
           member 14-like [Bos taurus].
          Length = 253

 Score =  262 bits (669), Expect = 4e-70
 Identities = 132/136 (97%), Positives = 135/136 (99%)
 Frame = +1

Query: 1   SGVISSTIANPTDVLKIRMQAQGSLFQGSMIGSFIDIYQQEGTRGLWRGVVPTAQRAAIV 180
           SGVISS IANPTDVLKIRMQAQGSLFQGSMIGSFIDIYQQEGTRGLWRGVVPTAQRAAIV
Sbjct: 116 SGVISSAIANPTDVLKIRMQAQGSLFQGSMIGSFIDIYQQEGTRGLWRGVVPTAQRAAIV 175

Query: 181 VGVELPVYDITKKHLILSGVLGDTILTHFVSSFTCGLAGALASNPVDVVRTRMMNQRAIV 360
           VGVELPVYDITKKHLILSG++GDTILTHFVSSFTCGLAGALASNPVDVVRTRMMNQRAIV
Sbjct: 176 VGVELPVYDITKKHLILSGLMGDTILTHFVSSFTCGLAGALASNPVDVVRTRMMNQRAIV 235

Query: 361 GHVDLYKGTLDGILKM 408
           GHVDLYKGTLDGILK+
Sbjct: 236 GHVDLYKGTLDGILKV 251



 Score = 59.3 bits (142), Expect = 5e-09
 Identities = 41/163 (25%), Positives = 78/163 (47%), Gaps = 13/163 (7%)
 Frame = +1

Query: 4   GVISSTIAN----PTDVLKIRMQAQGSLFQ--------GSMIGSFIDIYQQEGTRGLWRG 147
           G ++S +A     P D+ K R+Q QG              M  +   IY++EG   L+ G
Sbjct: 12  GGLASIVAEFGTFPVDLTKTRLQVQGQSIDVRFKEIKYRGMFHALFRIYKEEGVLALYSG 71

Query: 148 VVPTAQRAAIVVGVELPVYDITKKHLILSGVLGDTILTHFVSSFTCGLAGALASNPVDVV 327
           + P   R A    +++ +Y  + K L +  +  +T+L + +     G+  +  +NP DV+
Sbjct: 72  IAPALLRQASYGTIKIGIYQ-SLKRLFVERLEDETLLINMICGVVSGVISSAIANPTDVL 130

Query: 328 RTRMMNQRAIVGHVDLYKGTLDG-ILKMWKHEGFFALYKGFWP 453
           + RM  Q +      L++G++ G  + +++ EG   L++G  P
Sbjct: 131 KIRMQAQGS------LFQGSMIGSFIDIYQQEGTRGLWRGVVP 167


>ref|XP_002690360.1| PREDICTED: solute carrier family 25, member 30-like [Bos taurus].
          Length = 175

 Score =  213 bits (541), Expect = 3e-55
 Identities = 109/136 (80%), Positives = 121/136 (88%), Gaps = 1/136 (0%)
 Frame = +1

Query: 1   SGVISSTIANPTDVLKIRMQAQGSLFQGSMIGSFIDIYQQEGTRGLWRGVVPTAQRAAIV 180
           SGVISS+IANPTDVLKIRMQAQ S  QG MIG+FI+IYQQEGTRGLW+GV  TAQRAAIV
Sbjct: 31  SGVISSSIANPTDVLKIRMQAQSSTLQGGMIGNFINIYQQEGTRGLWKGVSLTAQRAAIV 90

Query: 181 VGVELPVYDITKKHLILSGVLGDTILTHFVSSFTCGLAGALASNPVDVVRTRMMNQRAI- 357
           VGVELPVYD+TKKHLILSG++GDT+ THF+SSFTCGLAGALASNPVDVVRTRMMNQR + 
Sbjct: 91  VGVELPVYDLTKKHLILSGLMGDTVYTHFLSSFTCGLAGALASNPVDVVRTRMMNQRVLR 150

Query: 358 VGHVDLYKGTLDGILK 405
            G    YKGTLD +L+
Sbjct: 151 DGKCPGYKGTLDCLLQ 166


>ref|XP_001252633.2| PREDICTED: solute carrier family 25, member 30-like [Bos taurus].
          Length = 175

 Score =  213 bits (541), Expect = 3e-55
 Identities = 109/136 (80%), Positives = 121/136 (88%), Gaps = 1/136 (0%)
 Frame = +1

Query: 1   SGVISSTIANPTDVLKIRMQAQGSLFQGSMIGSFIDIYQQEGTRGLWRGVVPTAQRAAIV 180
           SGVISS+IANPTDVLKIRMQAQ S  QG MIG+FI+IYQQEGTRGLW+GV  TAQRAAIV
Sbjct: 31  SGVISSSIANPTDVLKIRMQAQSSTLQGGMIGNFINIYQQEGTRGLWKGVSLTAQRAAIV 90

Query: 181 VGVELPVYDITKKHLILSGVLGDTILTHFVSSFTCGLAGALASNPVDVVRTRMMNQRAI- 357
           VGVELPVYD+TKKHLILSG++GDT+ THF+SSFTCGLAGALASNPVDVVRTRMMNQR + 
Sbjct: 91  VGVELPVYDLTKKHLILSGLMGDTVYTHFLSSFTCGLAGALASNPVDVVRTRMMNQRVLR 150

Query: 358 VGHVDLYKGTLDGILK 405
            G    YKGTLD +L+
Sbjct: 151 DGKCPGYKGTLDCLLQ 166


>ref|NP_001193123.1| mitochondrial uncoupling protein 4 [Bos taurus].
          Length = 323

 Score =  144 bits (362), Expect = 2e-34
 Identities = 74/182 (40%), Positives = 116/182 (63%), Gaps = 9/182 (4%)
 Frame = +1

Query: 1   SGVISSTIANPTDVLKIRMQAQGSL--------FQGSMIGSFIDIYQQEGTRGLWRGVVP 156
           +GV+   +ANPTD++K++MQ +G          F+G +  +F  I  + G RGLW G VP
Sbjct: 137 AGVVGQFLANPTDLVKVQMQMEGKRKLEGKPLRFRG-VHHAFAKILAEGGIRGLWAGWVP 195

Query: 157 TAQRAAIVVGVELPVYDITKKHLILSGVLGDTILTHFVSSFTCGLAGALASNPVDVVRTR 336
             QRAA+V   +L  YD  K +L+L+  L D I+TH +SS   GL  ++   P DV+++R
Sbjct: 196 NIQRAALVNMGDLTTYDTVKHYLVLNTPLEDNIVTHGLSSLCSGLVASILGTPADVIKSR 255

Query: 337 MMNQ-RAIVGHVDLYKGTLDGILKMWKHEGFFALYKGFWPNWLRLGPWNIIFFITYEQLK 513
           +MNQ R   G   LYK + D +++  + EGF +LYKGF P+WLR+ PW+++F++TYE+++
Sbjct: 256 IMNQPRDKQGRGLLYKSSTDCLIQAVQGEGFLSLYKGFLPSWLRMTPWSLVFWLTYEKIR 315

Query: 514 RL 519
            +
Sbjct: 316 EM 317



 Score = 55.1 bits (131), Expect = 1e-07
 Identities = 45/179 (25%), Positives = 77/179 (43%), Gaps = 18/179 (10%)
 Frame = +1

Query: 31  PTDVLKIRMQAQGS-----LFQGS--------MIGSFIDIYQQEGTRGLWRGVVPTAQRA 171
           P D+ K R+Q QG      L  G+        M+ + + I Q+EG   LW+GV P   R 
Sbjct: 39  PLDLTKTRLQIQGEAALARLGDGATESAPYRGMVRTALGIVQEEGFLKLWQGVTPAIYRH 98

Query: 172 AIVVGVELPVYDITKKHLILSGVLGD---TILTHFVSSFTCGLAGALASNPVDVVRTRMM 342
            +  G  +  Y+  ++  ++ G   D    +    +     G+ G   +NP D+V+ +M 
Sbjct: 99  IVYSGGRMVTYEHLRE--VVFGKSEDKHYPLWKSVIGGMMAGVVGQFLANPTDLVKVQMQ 156

Query: 343 --NQRAIVGHVDLYKGTLDGILKMWKHEGFFALYKGFWPNWLRLGPWNIIFFITYEQLK 513
              +R + G    ++G      K+    G   L+ G+ PN  R    N+    TY+ +K
Sbjct: 157 MEGKRKLEGKPLRFRGVHHAFAKILAEGGIRGLWAGWVPNIQRAALVNMGDLTTYDTVK 215


>ref|XP_002697311.1| PREDICTED: solute carrier family 25, member 27 [Bos taurus].
          Length = 323

 Score =  144 bits (362), Expect = 2e-34
 Identities = 74/182 (40%), Positives = 116/182 (63%), Gaps = 9/182 (4%)
 Frame = +1

Query: 1   SGVISSTIANPTDVLKIRMQAQGSL--------FQGSMIGSFIDIYQQEGTRGLWRGVVP 156
           +GV+   +ANPTD++K++MQ +G          F+G +  +F  I  + G RGLW G VP
Sbjct: 137 AGVVGQFLANPTDLVKVQMQMEGKRKLEGKPLRFRG-VHHAFAKILAEGGIRGLWAGWVP 195

Query: 157 TAQRAAIVVGVELPVYDITKKHLILSGVLGDTILTHFVSSFTCGLAGALASNPVDVVRTR 336
             QRAA+V   +L  YD  K +L+L+  L D I+TH +SS   GL  ++   P DV+++R
Sbjct: 196 NIQRAALVNMGDLTTYDTVKHYLVLNTPLEDNIVTHGLSSLCSGLVASILGTPADVIKSR 255

Query: 337 MMNQ-RAIVGHVDLYKGTLDGILKMWKHEGFFALYKGFWPNWLRLGPWNIIFFITYEQLK 513
           +MNQ R   G   LYK + D +++  + EGF +LYKGF P+WLR+ PW+++F++TYE+++
Sbjct: 256 IMNQPRDKQGRGLLYKSSTDCLIQAVQGEGFLSLYKGFLPSWLRMTPWSLVFWLTYEKIR 315

Query: 514 RL 519
            +
Sbjct: 316 EM 317



 Score = 55.1 bits (131), Expect = 1e-07
 Identities = 45/179 (25%), Positives = 77/179 (43%), Gaps = 18/179 (10%)
 Frame = +1

Query: 31  PTDVLKIRMQAQGS-----LFQGS--------MIGSFIDIYQQEGTRGLWRGVVPTAQRA 171
           P D+ K R+Q QG      L  G+        M+ + + I Q+EG   LW+GV P   R 
Sbjct: 39  PLDLTKTRLQIQGEAALARLGDGATESAPYRGMVRTALGIVQEEGFLKLWQGVTPAIYRH 98

Query: 172 AIVVGVELPVYDITKKHLILSGVLGD---TILTHFVSSFTCGLAGALASNPVDVVRTRMM 342
            +  G  +  Y+  ++  ++ G   D    +    +     G+ G   +NP D+V+ +M 
Sbjct: 99  IVYSGGRMVTYEHLRE--VVFGKSEDKHYPLWKSVIGGMMAGVVGQFLANPTDLVKVQMQ 156

Query: 343 --NQRAIVGHVDLYKGTLDGILKMWKHEGFFALYKGFWPNWLRLGPWNIIFFITYEQLK 513
              +R + G    ++G      K+    G   L+ G+ PN  R    N+    TY+ +K
Sbjct: 157 MEGKRKLEGKPLRFRGVHHAFAKILAEGGIRGLWAGWVPNIQRAALVNMGDLTTYDTVK 215


>ref|NP_776635.1| mitochondrial uncoupling protein 3 [Bos taurus].
          Length = 311

 Score =  137 bits (345), Expect = 2e-32
 Identities = 76/178 (42%), Positives = 104/178 (58%), Gaps = 6/178 (3%)
 Frame = +1

Query: 1   SGVISSTIANPTDVLKIRMQAQ------GSLFQGSMIGSFIDIYQQEGTRGLWRGVVPTA 162
           +G ++ T A PTDV+KIR QA       G+      + ++  I ++EG RGLW+G++P  
Sbjct: 126 TGAMAVTCAQPTDVVKIRFQASMHTGLGGNRKYSGTMDAYRTIAREEGVRGLWKGILPNI 185

Query: 163 QRAAIVVGVELPVYDITKKHLILSGVLGDTILTHFVSSFTCGLAGALASNPVDVVRTRMM 342
            R AIV   E+  YDI K+ L+   +L D    HFVS+F  G    L ++PVDVV+TR M
Sbjct: 186 TRNAIVNCGEMVTYDIIKEKLLDYHLLTDNFPCHFVSAFGAGFCATLVASPVDVVKTRYM 245

Query: 343 NQRAIVGHVDLYKGTLDGILKMWKHEGFFALYKGFWPNWLRLGPWNIIFFITYEQLKR 516
           N          Y    D +LKM   EG  A YKGF P++LRLG WN++ F+TYEQ+KR
Sbjct: 246 NSPP-----GQYHSPFDCMLKMVTQEGPTAFYKGFTPSFLRLGSWNVVMFVTYEQMKR 298



 Score = 70.9 bits (172), Expect = 2e-12
 Identities = 47/171 (27%), Positives = 76/171 (44%), Gaps = 10/171 (5%)
 Frame = +1

Query: 31  PTDVLKIRMQAQG---------SLFQGSMIGSFIDIYQQEGTRGLWRGVVPTAQRAAIVV 183
           P D  K+R+Q QG         S     ++G+ + + + EG R L+ G+V   QR     
Sbjct: 33  PLDTAKVRLQIQGENQAALAARSAQYRGVLGTILTMVRTEGPRSLYSGLVAGLQRQMSFA 92

Query: 184 GVELPVYDITKKHLILSGVLGDTILTHFVSSFTCGLAGALASNPVDVVRTRMM-NQRAIV 360
            + + +YD  K+     G    +I+T  ++  T G      + P DVV+ R   +    +
Sbjct: 93  SIRIGLYDSVKQFYTPKGSDHSSIITRILAGCTTGAMAVTCAQPTDVVKIRFQASMHTGL 152

Query: 361 GHVDLYKGTLDGILKMWKHEGFFALYKGFWPNWLRLGPWNIIFFITYEQLK 513
           G    Y GT+D    + + EG   L+KG  PN  R    N    +TY+ +K
Sbjct: 153 GGNRKYSGTMDAYRTIAREEGVRGLWKGILPNITRNAIVNCGEMVTYDIIK 203


>ref|NP_001028783.1| mitochondrial uncoupling protein 2 [Bos taurus].
          Length = 309

 Score =  133 bits (334), Expect = 3e-31
 Identities = 72/176 (40%), Positives = 101/176 (57%), Gaps = 4/176 (2%)
 Frame = +1

Query: 1   SGVISSTIANPTDVLKIRMQAQGSLFQGSMIGSFIDIYQ----QEGTRGLWRGVVPTAQR 168
           +G ++  +A PTDV+K+R QAQ     G    S ++ Y+    +EG RGLW+G  P   R
Sbjct: 126 TGALAVAVAQPTDVVKVRFQAQARAGAGRRYQSTVEAYKTIAREEGFRGLWKGTSPNVAR 185

Query: 169 AAIVVGVELPVYDITKKHLILSGVLGDTILTHFVSSFTCGLAGALASNPVDVVRTRMMNQ 348
            AIV   EL  YD+ K  L+ + ++ D +  HF S+F  G    + ++PVDVV+TR MN 
Sbjct: 186 NAIVNCAELVTYDLIKDTLLKAHLMTDDLPCHFTSAFGAGFCTTVIASPVDVVKTRYMNS 245

Query: 349 RAIVGHVDLYKGTLDGILKMWKHEGFFALYKGFWPNWLRLGPWNIIFFITYEQLKR 516
                 +  Y       L M + EG  A YKGF P++LRLG WN++ F+TYEQLKR
Sbjct: 246 A-----LGQYSSAGHCALTMLQKEGPQAFYKGFMPSFLRLGSWNVVMFVTYEQLKR 296



 Score = 67.0 bits (162), Expect = 3e-11
 Identities = 52/179 (29%), Positives = 79/179 (44%), Gaps = 11/179 (6%)
 Frame = +1

Query: 10  ISSTIANPTDVLKIRMQAQGSLFQGSM-----------IGSFIDIYQQEGTRGLWRGVVP 156
           I+  I  P D  K+R+Q QG   QG M           +G+ + + + EG R L+ G+V 
Sbjct: 26  IADLITFPLDTAKVRLQIQGER-QGPMQAAASAQYRGVLGTILTMVRTEGPRSLYSGLVA 84

Query: 157 TAQRAAIVVGVELPVYDITKKHLILSGVLGDTILTHFVSSFTCGLAGALASNPVDVVRTR 336
             QR      V + +YD + K     G     I +  ++  T G      + P DVV+ R
Sbjct: 85  GLQRQMSFASVRIGLYD-SVKQFYTKGSEHAGIGSRLLAGSTTGALAVAVAQPTDVVKVR 143

Query: 337 MMNQRAIVGHVDLYKGTLDGILKMWKHEGFFALYKGFWPNWLRLGPWNIIFFITYEQLK 513
              Q A  G    Y+ T++    + + EGF  L+KG  PN  R    N    +TY+ +K
Sbjct: 144 FQAQ-ARAGAGRRYQSTVEAYKTIAREEGFRGLWKGTSPNVARNAIVNCAELVTYDLIK 201


>ref|NP_777096.1| mitochondrial 2-oxoglutarate/malate carrier protein [Bos taurus].
          Length = 314

 Score =  127 bits (319), Expect = 2e-29
 Identities = 70/178 (39%), Positives = 101/178 (56%), Gaps = 6/178 (3%)
 Frame = +1

Query: 1   SGVISSTIANPTDVLKIRMQAQGSL------FQGSMIGSFIDIYQQEGTRGLWRGVVPTA 162
           +G   + +  P +V  IRM A G L         ++  +   I Q+EG   LWRG +PT 
Sbjct: 129 AGATGAFVGTPAEVALIRMTADGRLPVDQRRGYKNVFNALFRIVQEEGVPTLWRGCIPTM 188

Query: 163 QRAAIVVGVELPVYDITKKHLILSGVLGDTILTHFVSSFTCGLAGALASNPVDVVRTRMM 342
            RA +V   +L  Y  +K+ L+ SG   D IL HF +S   GL    AS PVD+V+TR+ 
Sbjct: 189 ARAVVVNAAQLASYSQSKQFLLDSGYFSDNILCHFCASMISGLVTTAASMPVDIVKTRIQ 248

Query: 343 NQRAIVGHVDLYKGTLDGILKMWKHEGFFALYKGFWPNWLRLGPWNIIFFITYEQLKR 516
           N R I G  + YK  LD ++K+ ++EGFF+L+KGF P + RLGP  ++ FI  EQ+ +
Sbjct: 249 NMRMIDGKPE-YKNGLDVLVKVVRYEGFFSLWKGFTPYYARLGPHTVLTFIFLEQMNK 305



 Score = 53.1 bits (126), Expect = 4e-07
 Identities = 44/177 (24%), Positives = 72/177 (40%), Gaps = 5/177 (2%)
 Frame = +1

Query: 1   SGVISSTIANPTDVLKIRMQAQG----SLFQGSMIGSFIDIYQQEGTRGLWRGVVPTAQR 168
           +G+ ++    P D++K RMQ  G    +    +   + I I + EG RG++ G+     R
Sbjct: 31  AGMGATVFVQPLDLVKNRMQLSGEGAKTREYKTSFHALISILRAEGLRGIYTGLSAGLLR 90

Query: 169 AAIVVGVELPVYDITKKHLILSGVLGDTILTHFVSSFTCGLAGALASNPVDVVRTRM-MN 345
            A      L +Y +  + L  +       L   V   T G  GA    P +V   RM  +
Sbjct: 91  QATYTTTRLGIYTVLFERLTGADGTPPGFLLKAVIGMTAGATGAFVGTPAEVALIRMTAD 150

Query: 346 QRAIVGHVDLYKGTLDGILKMWKHEGFFALYKGFWPNWLRLGPWNIIFFITYEQLKR 516
            R  V     YK   + + ++ + EG   L++G  P   R    N     +Y Q K+
Sbjct: 151 GRLPVDQRRGYKNVFNALFRIVQEEGVPTLWRGCIPTMARAVVVNAAQLASYSQSKQ 207


  Database: RefSeq49_BP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 17,681,374
  Number of sequences in database:  33,088
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33088
Number of Hits to DB: 35,901,551
Number of extensions: 974088
Number of successful extensions: 2709
Number of sequences better than 1.0e-05: 53
Number of HSP's gapped: 2579
Number of HSP's successfully gapped: 77
Length of query: 338
Length of database: 17,681,374
Length adjustment: 103
Effective length of query: 235
Effective length of database: 14,273,310
Effective search space: 3354227850
Effective search space used: 3354227850
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)

Search to RefSeqHP_Rel49

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= HTMT1_0029_D11
         (1015 letters)

Database: RefSeq49_HP.fasta 
           32,964 sequences; 18,297,164 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_003942.1| brain mitochondrial carrier protein 1 isoform U...   353   2e-97
Alignment   gi|NP_073721.1| brain mitochondrial carrier protein 1 isoform U...   353   2e-97
Alignment   gi|NP_001010875.1| kidney mitochondrial carrier protein 1 [Homo...   292   3e-79
Alignment   gi|NP_004268.3| mitochondrial uncoupling protein 4 isoform 1 [H...   144   1e-34
Alignment   gi|NP_003347.1| mitochondrial uncoupling protein 3 isoform UCP3...   136   4e-32
Alignment   gi|NP_003346.2| mitochondrial uncoupling protein 2 [Homo sapien...   133   2e-31
Alignment   gi|NP_001158890.1| mitochondrial 2-oxoglutarate/malate carrier ...   125   8e-29
Alignment   gi|NP_001158889.1| mitochondrial 2-oxoglutarate/malate carrier ...   125   8e-29
Alignment   gi|NP_003553.2| mitochondrial 2-oxoglutarate/malate carrier pro...   125   8e-29
Alignment   gi|NP_001190980.1| mitochondrial uncoupling protein 4 isoform 2...   123   2e-28

>ref|NP_003942.1| brain mitochondrial carrier protein 1 isoform UCP5L [Homo sapiens].
          Length = 325

 Score =  353 bits (905), Expect = 2e-97
 Identities = 172/175 (98%), Positives = 175/175 (100%)
 Frame = +1

Query: 1   SGVISSTIANPTDVLKIRMQAQGSLFQGSMIGSFIDIYQQEGTRGLWRGVVPTAQRAAIV 180
           SGVISSTIANPTDVLKIRMQAQGSLFQGSMIGSFIDIYQQEGTRGLWRGVVPTAQRAAIV
Sbjct: 151 SGVISSTIANPTDVLKIRMQAQGSLFQGSMIGSFIDIYQQEGTRGLWRGVVPTAQRAAIV 210

Query: 181 VGVELPVYDITKKHLILSGVLGDTILTHFVSSFTCGLAGALASNPVDVVRTRMMNQRAIV 360
           VGVELPVYDITKKHLILSG++GDTILTHFVSSFTCGLAGALASNPVDVVRTRMMNQRAIV
Sbjct: 211 VGVELPVYDITKKHLILSGMMGDTILTHFVSSFTCGLAGALASNPVDVVRTRMMNQRAIV 270

Query: 361 GHVDLYKGTLDGILKMWKHEGFFALYKGFWPNWLRLGPWNIIFFITYEQLKRLQI 525
           GHVDLYKGT+DGILKMWKHEGFFALYKGFWPNWLRLGPWNIIFFITYEQLKRLQI
Sbjct: 271 GHVDLYKGTVDGILKMWKHEGFFALYKGFWPNWLRLGPWNIIFFITYEQLKRLQI 325


>ref|NP_073721.1| brain mitochondrial carrier protein 1 isoform UCP5S [Homo sapiens].
          Length = 322

 Score =  353 bits (905), Expect = 2e-97
 Identities = 172/175 (98%), Positives = 175/175 (100%)
 Frame = +1

Query: 1   SGVISSTIANPTDVLKIRMQAQGSLFQGSMIGSFIDIYQQEGTRGLWRGVVPTAQRAAIV 180
           SGVISSTIANPTDVLKIRMQAQGSLFQGSMIGSFIDIYQQEGTRGLWRGVVPTAQRAAIV
Sbjct: 148 SGVISSTIANPTDVLKIRMQAQGSLFQGSMIGSFIDIYQQEGTRGLWRGVVPTAQRAAIV 207

Query: 181 VGVELPVYDITKKHLILSGVLGDTILTHFVSSFTCGLAGALASNPVDVVRTRMMNQRAIV 360
           VGVELPVYDITKKHLILSG++GDTILTHFVSSFTCGLAGALASNPVDVVRTRMMNQRAIV
Sbjct: 208 VGVELPVYDITKKHLILSGMMGDTILTHFVSSFTCGLAGALASNPVDVVRTRMMNQRAIV 267

Query: 361 GHVDLYKGTLDGILKMWKHEGFFALYKGFWPNWLRLGPWNIIFFITYEQLKRLQI 525
           GHVDLYKGT+DGILKMWKHEGFFALYKGFWPNWLRLGPWNIIFFITYEQLKRLQI
Sbjct: 268 GHVDLYKGTVDGILKMWKHEGFFALYKGFWPNWLRLGPWNIIFFITYEQLKRLQI 322


>ref|NP_001010875.1| kidney mitochondrial carrier protein 1 [Homo sapiens].
          Length = 291

 Score =  292 bits (748), Expect = 3e-79
 Identities = 142/176 (80%), Positives = 158/176 (89%), Gaps = 1/176 (0%)
 Frame = +1

Query: 1   SGVISSTIANPTDVLKIRMQAQGSLFQGSMIGSFIDIYQQEGTRGLWRGVVPTAQRAAIV 180
           SGVISSTIANPTDVLKIRMQAQ +  QG MIG+F++IYQQEGTRGLW+GV  TAQRAAIV
Sbjct: 116 SGVISSTIANPTDVLKIRMQAQSNTIQGGMIGNFMNIYQQEGTRGLWKGVSLTAQRAAIV 175

Query: 181 VGVELPVYDITKKHLILSGVLGDTILTHFVSSFTCGLAGALASNPVDVVRTRMMNQRAI- 357
           VGVELPVYDITKKHLILSG++GDT+ THF+SSFTCGLAGALASNPVDVVRTRMMNQR + 
Sbjct: 176 VGVELPVYDITKKHLILSGLMGDTVYTHFLSSFTCGLAGALASNPVDVVRTRMMNQRVLR 235

Query: 358 VGHVDLYKGTLDGILKMWKHEGFFALYKGFWPNWLRLGPWNIIFFITYEQLKRLQI 525
            G    Y GTLD +L+ WK+EGFFALYKGFWPNWLRLGPWNIIFF+TYEQLK+L +
Sbjct: 236 DGRCSGYTGTLDCLLQTWKNEGFFALYKGFWPNWLRLGPWNIIFFVTYEQLKKLDL 291


>ref|NP_004268.3| mitochondrial uncoupling protein 4 isoform 1 [Homo sapiens].
          Length = 323

 Score =  144 bits (363), Expect = 1e-34
 Identities = 75/182 (41%), Positives = 116/182 (63%), Gaps = 9/182 (4%)
 Frame = +1

Query: 1   SGVISSTIANPTDVLKIRMQAQGSL--------FQGSMIGSFIDIYQQEGTRGLWRGVVP 156
           +GVI   +ANPTD++K++MQ +G          F+G +  +F  I  + G RGLW G VP
Sbjct: 137 AGVIGQFLANPTDLVKVQMQMEGKRKLEGKPLRFRG-VHHAFAKILAEGGIRGLWAGWVP 195

Query: 157 TAQRAAIVVGVELPVYDITKKHLILSGVLGDTILTHFVSSFTCGLAGALASNPVDVVRTR 336
             QRAA+V   +L  YD  K +L+L+  L D I+TH +SS   GL  ++   P DV+++R
Sbjct: 196 NIQRAALVNMGDLTTYDTVKHYLVLNTPLEDNIMTHGLSSLCSGLVASILGTPADVIKSR 255

Query: 337 MMNQ-RAIVGHVDLYKGTLDGILKMWKHEGFFALYKGFWPNWLRLGPWNIIFFITYEQLK 513
           +MNQ R   G   LYK + D +++  + EGF +LYKGF P+WLR+ PW+++F++TYE+++
Sbjct: 256 IMNQPRDKQGRGLLYKSSTDCLIQAVQGEGFMSLYKGFLPSWLRMTPWSMVFWLTYEKIR 315

Query: 514 RL 519
            +
Sbjct: 316 EM 317



 Score = 53.9 bits (128), Expect = 2e-07
 Identities = 44/179 (24%), Positives = 77/179 (43%), Gaps = 18/179 (10%)
 Frame = +1

Query: 31  PTDVLKIRMQAQGS-----LFQGS--------MIGSFIDIYQQEGTRGLWRGVVPTAQRA 171
           P D+ K R+Q QG      L  G+        M+ + + I ++EG   LW+GV P   R 
Sbjct: 39  PLDLTKTRLQMQGEAALARLGDGARESAPYRGMVRTALGIIEEEGFLKLWQGVTPAIYRH 98

Query: 172 AIVVGVELPVYDITKKHLILSGVLGD---TILTHFVSSFTCGLAGALASNPVDVVRTRMM 342
            +  G  +  Y+  ++  ++ G   D    +    +     G+ G   +NP D+V+ +M 
Sbjct: 99  VVYSGGRMVTYEHLRE--VVFGKSEDEHYPLWKSVIGGMMAGVIGQFLANPTDLVKVQMQ 156

Query: 343 --NQRAIVGHVDLYKGTLDGILKMWKHEGFFALYKGFWPNWLRLGPWNIIFFITYEQLK 513
              +R + G    ++G      K+    G   L+ G+ PN  R    N+    TY+ +K
Sbjct: 157 MEGKRKLEGKPLRFRGVHHAFAKILAEGGIRGLWAGWVPNIQRAALVNMGDLTTYDTVK 215


>ref|NP_003347.1| mitochondrial uncoupling protein 3 isoform UCP3L [Homo sapiens].
          Length = 312

 Score =  136 bits (342), Expect = 4e-32
 Identities = 77/180 (42%), Positives = 106/180 (58%), Gaps = 8/180 (4%)
 Frame = +1

Query: 1   SGVISSTIANPTDVLKIRMQAQGSL--------FQGSMIGSFIDIYQQEGTRGLWRGVVP 156
           +G ++ T A PTDV+K+R QA   L        + G+M  ++  I ++EG RGLW+G +P
Sbjct: 126 TGAMAVTCAQPTDVVKVRFQASIHLGPSRSDRKYSGTM-DAYRTIAREEGVRGLWKGTLP 184

Query: 157 TAQRAAIVVGVELPVYDITKKHLILSGVLGDTILTHFVSSFTCGLAGALASNPVDVVRTR 336
              R AIV   E+  YDI K+ L+   +L D    HFVS+F  G    + ++PVDVV+TR
Sbjct: 185 NIMRNAIVNCAEVVTYDILKEKLLDYHLLTDNFPCHFVSAFGAGFCATVVASPVDVVKTR 244

Query: 337 MMNQRAIVGHVDLYKGTLDGILKMWKHEGFFALYKGFWPNWLRLGPWNIIFFITYEQLKR 516
            MN          Y   LD ++KM   EG  A YKGF P++LRLG WN++ F+TYEQLKR
Sbjct: 245 YMNSPP-----GQYFSPLDCMIKMVAQEGPTAFYKGFTPSFLRLGSWNVVMFVTYEQLKR 299



 Score = 61.6 bits (148), Expect = 1e-09
 Identities = 47/177 (26%), Positives = 78/177 (44%), Gaps = 16/177 (9%)
 Frame = +1

Query: 31  PTDVLKIRMQAQGS----------LFQGSMIGSFIDIYQQEGTRGLWRGVVPTAQRAAIV 180
           P D  K+R+Q QG            ++G ++G+ + + + EG    + G+V   QR    
Sbjct: 33  PLDTAKVRLQIQGENQAVQTARLVQYRG-VLGTILTMVRTEGPCSPYNGLVAGLQRQMSF 91

Query: 181 VGVELPVYDITKKHLILSGVLGDTILTHFVSSFTCGLAGALASNPVDVVRTRMMNQRAIV 360
             + + +YD  K+     G    ++ T  ++  T G      + P DVV+ R   Q +I 
Sbjct: 92  ASIRIGLYDSVKQVYTPKGADNSSLTTRILAGCTTGAMAVTCAQPTDVVKVRF--QASI- 148

Query: 361 GHVD------LYKGTLDGILKMWKHEGFFALYKGFWPNWLRLGPWNIIFFITYEQLK 513
            H+        Y GT+D    + + EG   L+KG  PN +R    N    +TY+ LK
Sbjct: 149 -HLGPSRSDRKYSGTMDAYRTIAREEGVRGLWKGTLPNIMRNAIVNCAEVVTYDILK 204


>ref|NP_003346.2| mitochondrial uncoupling protein 2 [Homo sapiens].
          Length = 309

 Score =  133 bits (335), Expect = 2e-31
 Identities = 72/176 (40%), Positives = 102/176 (57%), Gaps = 4/176 (2%)
 Frame = +1

Query: 1   SGVISSTIANPTDVLKIRMQAQGSLFQG----SMIGSFIDIYQQEGTRGLWRGVVPTAQR 168
           +G ++  +A PTDV+K+R QAQ     G    S + ++  I ++EG RGLW+G  P   R
Sbjct: 126 TGALAVAVAQPTDVVKVRFQAQARAGGGRRYQSTVNAYKTIAREEGFRGLWKGTSPNVAR 185

Query: 169 AAIVVGVELPVYDITKKHLILSGVLGDTILTHFVSSFTCGLAGALASNPVDVVRTRMMNQ 348
            AIV   EL  YD+ K  L+ + ++ D +  HF S+F  G    + ++PVDVV+TR MN 
Sbjct: 186 NAIVNCAELVTYDLIKDALLKANLMTDDLPCHFTSAFGAGFCTTVIASPVDVVKTRYMNS 245

Query: 349 RAIVGHVDLYKGTLDGILKMWKHEGFFALYKGFWPNWLRLGPWNIIFFITYEQLKR 516
                 +  Y       L M + EG  A YKGF P++LRLG WN++ F+TYEQLKR
Sbjct: 246 A-----LGQYSSAGHCALTMLQKEGPRAFYKGFMPSFLRLGSWNVVMFVTYEQLKR 296



 Score = 67.0 bits (162), Expect = 3e-11
 Identities = 50/178 (28%), Positives = 79/178 (44%), Gaps = 10/178 (5%)
 Frame = +1

Query: 10  ISSTIANPTDVLKIRMQAQG----------SLFQGSMIGSFIDIYQQEGTRGLWRGVVPT 159
           I+  I  P D  K+R+Q QG          S     ++G+ + + + EG R L+ G+V  
Sbjct: 26  IADLITFPLDTAKVRLQIQGESQGPVRATASAQYRGVMGTILTMVRTEGPRSLYNGLVAG 85

Query: 160 AQRAAIVVGVELPVYDITKKHLILSGVLGDTILTHFVSSFTCGLAGALASNPVDVVRTRM 339
            QR      V + +YD + K     G    +I +  ++  T G      + P DVV+ R 
Sbjct: 86  LQRQMSFASVRIGLYD-SVKQFYTKGSEHASIGSRLLAGSTTGALAVAVAQPTDVVKVRF 144

Query: 340 MNQRAIVGHVDLYKGTLDGILKMWKHEGFFALYKGFWPNWLRLGPWNIIFFITYEQLK 513
             Q A  G    Y+ T++    + + EGF  L+KG  PN  R    N    +TY+ +K
Sbjct: 145 QAQ-ARAGGGRRYQSTVNAYKTIAREEGFRGLWKGTSPNVARNAIVNCAELVTYDLIK 201


>ref|NP_001158890.1| mitochondrial 2-oxoglutarate/malate carrier protein isoform 3 [Homo
           sapiens].
          Length = 263

 Score =  125 bits (313), Expect = 8e-29
 Identities = 70/178 (39%), Positives = 99/178 (55%), Gaps = 6/178 (3%)
 Frame = +1

Query: 1   SGVISSTIANPTDVLKIRMQAQGSLFQGSMIG------SFIDIYQQEGTRGLWRGVVPTA 162
           +G   + +  P +V  IRM A G L      G      + I I ++EG   LWRG +PT 
Sbjct: 78  AGATGAFVGTPAEVALIRMTADGRLPADQRRGYKNVFNALIRITREEGVLTLWRGCIPTM 137

Query: 163 QRAAIVVGVELPVYDITKKHLILSGVLGDTILTHFVSSFTCGLAGALASNPVDVVRTRMM 342
            RA +V   +L  Y  +K+ L+ SG   D IL HF +S   GL    AS PVD+ +TR+ 
Sbjct: 138 ARAVVVNAAQLASYSQSKQFLLDSGYFSDNILCHFCASMISGLVTTAASMPVDIAKTRIQ 197

Query: 343 NQRAIVGHVDLYKGTLDGILKMWKHEGFFALYKGFWPNWLRLGPWNIIFFITYEQLKR 516
           N R I G  + YK  LD + K+ ++EGFF+L+KGF P + RLGP  ++ FI  EQ+ +
Sbjct: 198 NMRMIDGKPE-YKNGLDVLFKVVRYEGFFSLWKGFTPYYARLGPHTVLTFIFLEQMNK 254


>ref|NP_001158889.1| mitochondrial 2-oxoglutarate/malate carrier protein isoform 2 [Homo
           sapiens].
          Length = 303

 Score =  125 bits (313), Expect = 8e-29
 Identities = 70/178 (39%), Positives = 99/178 (55%), Gaps = 6/178 (3%)
 Frame = +1

Query: 1   SGVISSTIANPTDVLKIRMQAQGSLFQGSMIG------SFIDIYQQEGTRGLWRGVVPTA 162
           +G   + +  P +V  IRM A G L      G      + I I ++EG   LWRG +PT 
Sbjct: 118 AGATGAFVGTPAEVALIRMTADGRLPADQRRGYKNVFNALIRITREEGVLTLWRGCIPTM 177

Query: 163 QRAAIVVGVELPVYDITKKHLILSGVLGDTILTHFVSSFTCGLAGALASNPVDVVRTRMM 342
            RA +V   +L  Y  +K+ L+ SG   D IL HF +S   GL    AS PVD+ +TR+ 
Sbjct: 178 ARAVVVNAAQLASYSQSKQFLLDSGYFSDNILCHFCASMISGLVTTAASMPVDIAKTRIQ 237

Query: 343 NQRAIVGHVDLYKGTLDGILKMWKHEGFFALYKGFWPNWLRLGPWNIIFFITYEQLKR 516
           N R I G  + YK  LD + K+ ++EGFF+L+KGF P + RLGP  ++ FI  EQ+ +
Sbjct: 238 NMRMIDGKPE-YKNGLDVLFKVVRYEGFFSLWKGFTPYYARLGPHTVLTFIFLEQMNK 294


>ref|NP_003553.2| mitochondrial 2-oxoglutarate/malate carrier protein isoform 1 [Homo
           sapiens].
          Length = 314

 Score =  125 bits (313), Expect = 8e-29
 Identities = 70/178 (39%), Positives = 99/178 (55%), Gaps = 6/178 (3%)
 Frame = +1

Query: 1   SGVISSTIANPTDVLKIRMQAQGSLFQGSMIG------SFIDIYQQEGTRGLWRGVVPTA 162
           +G   + +  P +V  IRM A G L      G      + I I ++EG   LWRG +PT 
Sbjct: 129 AGATGAFVGTPAEVALIRMTADGRLPADQRRGYKNVFNALIRITREEGVLTLWRGCIPTM 188

Query: 163 QRAAIVVGVELPVYDITKKHLILSGVLGDTILTHFVSSFTCGLAGALASNPVDVVRTRMM 342
            RA +V   +L  Y  +K+ L+ SG   D IL HF +S   GL    AS PVD+ +TR+ 
Sbjct: 189 ARAVVVNAAQLASYSQSKQFLLDSGYFSDNILCHFCASMISGLVTTAASMPVDIAKTRIQ 248

Query: 343 NQRAIVGHVDLYKGTLDGILKMWKHEGFFALYKGFWPNWLRLGPWNIIFFITYEQLKR 516
           N R I G  + YK  LD + K+ ++EGFF+L+KGF P + RLGP  ++ FI  EQ+ +
Sbjct: 249 NMRMIDGKPE-YKNGLDVLFKVVRYEGFFSLWKGFTPYYARLGPHTVLTFIFLEQMNK 305



 Score = 52.8 bits (125), Expect = 5e-07
 Identities = 42/177 (23%), Positives = 71/177 (40%), Gaps = 5/177 (2%)
 Frame = +1

Query: 1   SGVISSTIANPTDVLKIRMQAQG----SLFQGSMIGSFIDIYQQEGTRGLWRGVVPTAQR 168
           +G+ ++    P D++K RMQ  G    +    +   +   I + EG RG++ G+     R
Sbjct: 31  AGMGATVFVQPLDLVKNRMQLSGEGAKTREYKTSFHALTSILKAEGLRGIYTGLSAGLLR 90

Query: 169 AAIVVGVELPVYDITKKHLILSGVLGDTILTHFVSSFTCGLAGALASNPVDVVRTRM-MN 345
            A      L +Y +  + L  +       L   V   T G  GA    P +V   RM  +
Sbjct: 91  QATYTTTRLGIYTVLFERLTGADGTPPGFLLKAVIGMTAGATGAFVGTPAEVALIRMTAD 150

Query: 346 QRAIVGHVDLYKGTLDGILKMWKHEGFFALYKGFWPNWLRLGPWNIIFFITYEQLKR 516
            R        YK   + ++++ + EG   L++G  P   R    N     +Y Q K+
Sbjct: 151 GRLPADQRRGYKNVFNALIRITREEGVLTLWRGCIPTMARAVVVNAAQLASYSQSKQ 207


>ref|NP_001190980.1| mitochondrial uncoupling protein 4 isoform 2 [Homo sapiens].
          Length = 300

 Score =  123 bits (309), Expect = 2e-28
 Identities = 69/165 (41%), Positives = 101/165 (61%), Gaps = 9/165 (5%)
 Frame = +1

Query: 1   SGVISSTIANPTDVLKIRMQAQGSL--------FQGSMIGSFIDIYQQEGTRGLWRGVVP 156
           +GVI   +ANPTD++K++MQ +G          F+G +  +F  I  + G RGLW G VP
Sbjct: 137 AGVIGQFLANPTDLVKVQMQMEGKRKLEGKPLRFRG-VHHAFAKILAEGGIRGLWAGWVP 195

Query: 157 TAQRAAIVVGVELPVYDITKKHLILSGVLGDTILTHFVSSFTCGLAGALASNPVDVVRTR 336
             QRAA+V   +L  YD  K +L+L+  L D I+TH +SS   GL  ++   P DV+++R
Sbjct: 196 NIQRAALVNMGDLTTYDTVKHYLVLNTPLEDNIMTHGLSSLCSGLVASILGTPADVIKSR 255

Query: 337 MMNQ-RAIVGHVDLYKGTLDGILKMWKHEGFFALYKGFWPNWLRL 468
           +MNQ R   G   LYK + D +++  + EGF +LYKGF P+WLR+
Sbjct: 256 IMNQPRDKQGRGLLYKSSTDCLIQAVQGEGFMSLYKGFLPSWLRM 300



 Score = 53.9 bits (128), Expect = 2e-07
 Identities = 44/179 (24%), Positives = 77/179 (43%), Gaps = 18/179 (10%)
 Frame = +1

Query: 31  PTDVLKIRMQAQGS-----LFQGS--------MIGSFIDIYQQEGTRGLWRGVVPTAQRA 171
           P D+ K R+Q QG      L  G+        M+ + + I ++EG   LW+GV P   R 
Sbjct: 39  PLDLTKTRLQMQGEAALARLGDGARESAPYRGMVRTALGIIEEEGFLKLWQGVTPAIYRH 98

Query: 172 AIVVGVELPVYDITKKHLILSGVLGD---TILTHFVSSFTCGLAGALASNPVDVVRTRMM 342
            +  G  +  Y+  ++  ++ G   D    +    +     G+ G   +NP D+V+ +M 
Sbjct: 99  VVYSGGRMVTYEHLRE--VVFGKSEDEHYPLWKSVIGGMMAGVIGQFLANPTDLVKVQMQ 156

Query: 343 --NQRAIVGHVDLYKGTLDGILKMWKHEGFFALYKGFWPNWLRLGPWNIIFFITYEQLK 513
              +R + G    ++G      K+    G   L+ G+ PN  R    N+    TY+ +K
Sbjct: 157 MEGKRKLEGKPLRFRGVHHAFAKILAEGGIRGLWAGWVPNIQRAALVNMGDLTTYDTVK 215


  Database: RefSeq49_HP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 18,297,164
  Number of sequences in database:  32,964
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 32964
Number of Hits to DB: 36,433,655
Number of extensions: 911563
Number of successful extensions: 2761
Number of sequences better than 1.0e-05: 59
Number of HSP's gapped: 2600
Number of HSP's successfully gapped: 94
Length of query: 338
Length of database: 18,297,164
Length adjustment: 103
Effective length of query: 235
Effective length of database: 14,901,872
Effective search space: 3501939920
Effective search space used: 3501939920
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)

Search to Sscrofa10_2

BLASTN 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= HTMT1_0029_D11
         (1015 letters)

Database: Sscrofa_10.2.fasta 
           4582 sequences; 2,808,509,378 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|GL894065.1| Sus scrofa unplaced genomic scaffold chrU_scaffol...   876   0.0  
Sscrofa_ChrX                                                          876   0.0  

>gb|GL894065.1| Sus scrofa unplaced genomic scaffold chrU_scaffold2768
          Length = 69765

 Score =  876 bits (442), Expect = 0.0
 Identities = 442/442 (100%)
 Strand = Plus / Plus

                                                                         
Query: 493   atcacatatgagcagctcaagaggcttcaaatctaaggactgaattatatgtgagccaag 552
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 30040 atcacatatgagcagctcaagaggcttcaaatctaaggactgaattatatgtgagccaag 30099

                                                                         
Query: 553   ttctgtcaacctttctactcttttcttttcccttttcctgtgttctaatgtattttgaca 612
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 30100 ttctgtcaacctttctactcttttcttttcccttttcctgtgttctaatgtattttgaca 30159

                                                                         
Query: 613   aagtcgtaagtatttactgaaccatttgtctcctaaggtccttctgatggaagaatgata 672
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 30160 aagtcgtaagtatttactgaaccatttgtctcctaaggtccttctgatggaagaatgata 30219

                                                                         
Query: 673   ggatggttcaaaattgcttatgtgtttgtgttaccatgtgaacttttccctgagaggaag 732
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 30220 ggatggttcaaaattgcttatgtgtttgtgttaccatgtgaacttttccctgagaggaag 30279

                                                                         
Query: 733   tattaacattgagactctggccccagattggtatcttctgtgaagatggatactgatgga 792
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 30280 tattaacattgagactctggccccagattggtatcttctgtgaagatggatactgatgga 30339

                                                                         
Query: 793   tgacactcaaaatggccttctctccaaatgtgggttaaatgtagtttgttagccccagac 852
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 30340 tgacactcaaaatggccttctctccaaatgtgggttaaatgtagtttgttagccccagac 30399

                                                                         
Query: 853   ttgggctagagcagaaagcataggccagggcagttattgtatgttacagacctcggttct 912
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 30400 ttgggctagagcagaaagcataggccagggcagttattgtatgttacagacctcggttct 30459

                                   
Query: 913   cattaaaaagtatttattggca 934
             ||||||||||||||||||||||
Sbjct: 30460 cattaaaaagtatttattggca 30481



 Score =  270 bits (136), Expect = 1e-69
 Identities = 136/136 (100%)
 Strand = Plus / Plus

                                                                         
Query: 270   ttctagctttacatgtggcttggctggggctctggcttccaatccagttgatgtggttcg 329
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 23204 ttctagctttacatgtggcttggctggggctctggcttccaatccagttgatgtggttcg 23263

                                                                         
Query: 330   aactcgcatgatgaaccagagggcaattgtggggcacgtggacctctacaagggcacttt 389
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 23264 aactcgcatgatgaaccagagggcaattgtggggcacgtggacctctacaagggcacttt 23323

                             
Query: 390   ggatggtattttaaag 405
             ||||||||||||||||
Sbjct: 23324 ggatggtattttaaag 23339



 Score =  196 bits (99), Expect = 2e-47
 Identities = 99/99 (100%)
 Strand = Plus / Plus

                                                                         
Query: 47    agattcgaatgcaggctcaaggaagcttgttccaaggcagcatgattggcagcttcattg 106
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17526 agattcgaatgcaggctcaaggaagcttgttccaaggcagcatgattggcagcttcattg 17585

                                                    
Query: 107   atatataccaacaagaaggtaccaggggtctgtggcggg 145
             |||||||||||||||||||||||||||||||||||||||
Sbjct: 17586 atatataccaacaagaaggtaccaggggtctgtggcggg 17624



 Score =  161 bits (81), Expect = 9e-37
 Identities = 81/81 (100%)
 Strand = Plus / Plus

                                                                         
Query: 404   agatgtggaaacatgaaggcttttttgcactctataaaggattttggccaaactggcttc 463
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 29078 agatgtggaaacatgaaggcttttttgcactctataaaggattttggccaaactggcttc 29137

                                  
Query: 464   gacttggaccctggaacatca 484
             |||||||||||||||||||||
Sbjct: 29138 gacttggaccctggaacatca 29158



 Score =  123 bits (62), Expect = 2e-25
 Identities = 62/62 (100%)
 Strand = Plus / Plus

                                                                         
Query: 208   attacgaagaagcacctaatattgtcaggggtgttgggagacacaatcttaactcacttt 267
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22335 attacgaagaagcacctaatattgtcaggggtgttgggagacacaatcttaactcacttt 22394

               
Query: 268   gt 269
             ||
Sbjct: 22395 gt 22396



 Score = 95.6 bits (48), Expect = 5e-17
 Identities = 48/48 (100%)
 Strand = Plus / Plus

                                                             
Query: 1     tcaggagtgatatcttccactatagccaatcccaccgatgtgctaaag 48
             ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12806 tcaggagtgatatcttccactatagccaatcccaccgatgtgctaaag 12853


>Sscrofa_ChrX 
||          Length = 144288218

 Score =  876 bits (442), Expect = 0.0
 Identities = 442/442 (100%)
 Strand = Plus / Plus

                                                                             
Query: 493       atcacatatgagcagctcaagaggcttcaaatctaaggactgaattatatgtgagccaag 552
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122627143 atcacatatgagcagctcaagaggcttcaaatctaaggactgaattatatgtgagccaag 122627202

                                                                             
Query: 553       ttctgtcaacctttctactcttttcttttcccttttcctgtgttctaatgtattttgaca 612
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122627203 ttctgtcaacctttctactcttttcttttcccttttcctgtgttctaatgtattttgaca 122627262

                                                                             
Query: 613       aagtcgtaagtatttactgaaccatttgtctcctaaggtccttctgatggaagaatgata 672
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122627263 aagtcgtaagtatttactgaaccatttgtctcctaaggtccttctgatggaagaatgata 122627322

                                                                             
Query: 673       ggatggttcaaaattgcttatgtgtttgtgttaccatgtgaacttttccctgagaggaag 732
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122627323 ggatggttcaaaattgcttatgtgtttgtgttaccatgtgaacttttccctgagaggaag 122627382

                                                                             
Query: 733       tattaacattgagactctggccccagattggtatcttctgtgaagatggatactgatgga 792
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122627383 tattaacattgagactctggccccagattggtatcttctgtgaagatggatactgatgga 122627442

                                                                             
Query: 793       tgacactcaaaatggccttctctccaaatgtgggttaaatgtagtttgttagccccagac 852
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122627443 tgacactcaaaatggccttctctccaaatgtgggttaaatgtagtttgttagccccagac 122627502

                                                                             
Query: 853       ttgggctagagcagaaagcataggccagggcagttattgtatgttacagacctcggttct 912
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122627503 ttgggctagagcagaaagcataggccagggcagttattgtatgttacagacctcggttct 122627562

                                       
Query: 913       cattaaaaagtatttattggca 934
                 ||||||||||||||||||||||
Sbjct: 122627563 cattaaaaagtatttattggca 122627584



 Score =  270 bits (136), Expect = 1e-69
 Identities = 136/136 (100%)
 Strand = Plus / Plus

                                                                             
Query: 270       ttctagctttacatgtggcttggctggggctctggcttccaatccagttgatgtggttcg 329
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122620206 ttctagctttacatgtggcttggctggggctctggcttccaatccagttgatgtggttcg 122620265

                                                                             
Query: 330       aactcgcatgatgaaccagagggcaattgtggggcacgtggacctctacaagggcacttt 389
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122620266 aactcgcatgatgaaccagagggcaattgtggggcacgtggacctctacaagggcacttt 122620325

                                 
Query: 390       ggatggtattttaaag 405
                 ||||||||||||||||
Sbjct: 122620326 ggatggtattttaaag 122620341



 Score =  250 bits (126), Expect = 1e-63
 Identities = 126/126 (100%)
 Strand = Plus / Plus

                                                                             
Query: 144       gggtgtcgtcccaactgctcagcgggctgccatcgttgtgggagtagagctaccagtcta 203
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122619273 gggtgtcgtcccaactgctcagcgggctgccatcgttgtgggagtagagctaccagtcta 122619332

                                                                             
Query: 204       cgatattacgaagaagcacctaatattgtcaggggtgttgggagacacaatcttaactca 263
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122619333 cgatattacgaagaagcacctaatattgtcaggggtgttgggagacacaatcttaactca 122619392

                       
Query: 264       ctttgt 269
                 ||||||
Sbjct: 122619393 ctttgt 122619398



 Score =  196 bits (99), Expect = 2e-47
 Identities = 99/99 (100%)
 Strand = Plus / Plus

                                                                             
Query: 47        agattcgaatgcaggctcaaggaagcttgttccaaggcagcatgattggcagcttcattg 106
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122614282 agattcgaatgcaggctcaaggaagcttgttccaaggcagcatgattggcagcttcattg 122614341

                                                        
Query: 107       atatataccaacaagaaggtaccaggggtctgtggcggg 145
                 |||||||||||||||||||||||||||||||||||||||
Sbjct: 122614342 atatataccaacaagaaggtaccaggggtctgtggcggg 122614380



 Score =  161 bits (81), Expect = 9e-37
 Identities = 81/81 (100%)
 Strand = Plus / Plus

                                                                             
Query: 404       agatgtggaaacatgaaggcttttttgcactctataaaggattttggccaaactggcttc 463
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122626181 agatgtggaaacatgaaggcttttttgcactctataaaggattttggccaaactggcttc 122626240

                                      
Query: 464       gacttggaccctggaacatca 484
                 |||||||||||||||||||||
Sbjct: 122626241 gacttggaccctggaacatca 122626261



 Score = 95.6 bits (48), Expect = 5e-17
 Identities = 48/48 (100%)
 Strand = Plus / Plus

                                                                 
Query: 1         tcaggagtgatatcttccactatagccaatcccaccgatgtgctaaag 48
                 ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122609562 tcaggagtgatatcttccactatagccaatcccaccgatgtgctaaag 122609609


  Database: Sscrofa_10.2.fasta
    Posted date:  Nov 16, 2011 10:34 AM
  Number of letters in database: 2,808,509,378
  Number of sequences in database:  4582
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4582
Number of Hits to DB: 29,772,282
Number of extensions: 300
Number of successful extensions: 300
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 300
Number of HSP's successfully gapped: 12
Length of query: 1015
Length of database: 2,808,509,378
Length adjustment: 21
Effective length of query: 994
Effective length of database: 2,808,413,156
Effective search space: 2791562677064
Effective search space used: 2791562677064
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 18 (36.2 bits)
S2: 29 (58.0 bits)