Animal-Genome cDNA HTMT1_0093_E12


Search to RefSeqBP_Rel49

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= HTMT1_0093_E12
         (2042 letters)

Database: RefSeq49_BP.fasta 
           33,088 sequences; 17,681,374 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_001069345.1| NADP-dependent malic enzyme, mitochondrial [...  1097   0.0  
Alignment   gi|NP_001138325.1| NADP-dependent malic enzyme [Bos taurus].         783   0.0  
Alignment   gi|NP_001070282.1| NAD-dependent malic enzyme, mitochondrial [B...   636   0.0  
Alignment   gi|XP_002683959.1| PREDICTED: predicted protein-like, partial [...    62   2e-09

>ref|NP_001069345.1| NADP-dependent malic enzyme, mitochondrial [Bos taurus].
          Length = 604

 Score = 1097 bits (2836), Expect = 0.0
 Identities = 543/604 (89%), Positives = 557/604 (92%)
 Frame = +1

Query: 136  MGASLGSGARVALLPRQACGAVXXXXXXXXXXGCHSKTGLPRPVPLKKRGYDVTRNPHLN 315
            MGA+LG+GAR+ L   +ACGAV          GCHSK    RPVPLKKRGYDVTRNPHLN
Sbjct: 1    MGAALGTGARLTLRSGRACGAVRSWAPPAPARGCHSKARPARPVPLKKRGYDVTRNPHLN 60

Query: 316  KGMAFTLEERLQLGIHGLIPPCFLSQDVQLLRIMRYYERQQSDLDKYIILMTLQDRNEKL 495
            KGMAFTLEERLQLGIHGLIPPCFLSQDVQLLR+MRYYERQQSDLDKYIILMTLQDRNEKL
Sbjct: 61   KGMAFTLEERLQLGIHGLIPPCFLSQDVQLLRVMRYYERQQSDLDKYIILMTLQDRNEKL 120

Query: 496  FYRVLTSDVEKFMPIVYTPTVGLACQHYGLTFRRPRGLFITIHDKGHLPTMLNSWPEDDI 675
            FYRVLTSDVEKF+PIVYTPTVGLACQHYGLTFRRPRGLFIT+HDKGHL TMLNSWPEDDI
Sbjct: 121  FYRVLTSDVEKFLPIVYTPTVGLACQHYGLTFRRPRGLFITVHDKGHLATMLNSWPEDDI 180

Query: 676  KAVVVTDGERILGLGDLGCYGMGIPVGKLALYTACGGVNPRQCLPVLLDVGTNNEELLRD 855
            KAVVVTDGERILGLGDLGCYGMGIPVGKLALYTACGGVNPRQCLPVLLDVGTNNEELLRD
Sbjct: 181  KAVVVTDGERILGLGDLGCYGMGIPVGKLALYTACGGVNPRQCLPVLLDVGTNNEELLRD 240

Query: 856  PLYIGLKHRRVRGQDYDDLLDEFMQAVTDKFGINCLIQFEDFANANAFRLLNKYRNKYCM 1035
            PLYIGLKHRRVRGQ+YDDLLDEFMQAVTDKFGINCLIQFEDFANANAFRLLNKYRNKYCM
Sbjct: 241  PLYIGLKHRRVRGQEYDDLLDEFMQAVTDKFGINCLIQFEDFANANAFRLLNKYRNKYCM 300

Query: 1036 FNDDIQGTASVAVAGILAALRITKNKLSNHVFVFQGAGEAAMGIAHLLVMALEKEGVPKA 1215
            FNDDIQGTASVAVAGILAALRITKNKLSNHVFVFQGAGEAAMGIAHLLVMALEKEGVPKA
Sbjct: 301  FNDDIQGTASVAVAGILAALRITKNKLSNHVFVFQGAGEAAMGIAHLLVMALEKEGVPKA 360

Query: 1216 EATRKIWMVDSRGLIVKGRSHLNHEKEMFAQDHPXXXXXXXXXXXXKPTXXXXXXXXXXX 1395
            EATRKIWMVDS+GLIVKGRSHLNHEKEMFAQDHP            KPT           
Sbjct: 361  EATRKIWMVDSKGLIVKGRSHLNHEKEMFAQDHPEVNSLEEVVRLVKPTAIIGVAAIAGA 420

Query: 1396 FTEQILRDMASFHERPIIFALSNPTSKAECTAEKCYRVTEGRGIFASGSPFKSVTLEDGR 1575
            FTEQILRDMASFHE PIIFALSNPTSKAECTAEKCYRVTEGRGIFASGSPF SVTLEDGR
Sbjct: 421  FTEQILRDMASFHEHPIIFALSNPTSKAECTAEKCYRVTEGRGIFASGSPFPSVTLEDGR 480

Query: 1576 TFIPGQGNNAYVFPGVALGVIAGGIRHIPDEIFLLTAEQIAQEVSEQHLSQGRLYPPLST 1755
            TF PGQGNNAYVFPGVALGVIAGGIRHIPDEIFLLTAEQIAQEVSE HLSQGRLYPPLST
Sbjct: 481  TFFPGQGNNAYVFPGVALGVIAGGIRHIPDEIFLLTAEQIAQEVSEHHLSQGRLYPPLST 540

Query: 1756 IRDVSLRIAIKVLDYAYKHNLASYYPEPKDKEAFVRSLVYTPDYDSFTLDSYTWPKEAMN 1935
            IRDVSLRIAIKVLD+AYKHNLASYYPEP+DKEAFVRSLVYTP+YDSFTLDSYTWP+EAMN
Sbjct: 541  IRDVSLRIAIKVLDFAYKHNLASYYPEPEDKEAFVRSLVYTPEYDSFTLDSYTWPEEAMN 600

Query: 1936 VQNV 1947
            VQ +
Sbjct: 601  VQTI 604


>ref|NP_001138325.1| NADP-dependent malic enzyme [Bos taurus].
          Length = 568

 Score =  783 bits (2023), Expect = 0.0
 Identities = 377/542 (69%), Positives = 449/542 (82%)
 Frame = +1

Query: 316  KGMAFTLEERLQLGIHGLIPPCFLSQDVQLLRIMRYYERQQSDLDKYIILMTLQDRNEKL 495
            + +AFTLEER QL IHGL+PP F+SQDVQ+LR+++ +ER  SD D+Y++LM LQDRNEKL
Sbjct: 23   RDLAFTLEERQQLNIHGLLPPSFISQDVQVLRVLKNFERLNSDFDRYLLLMDLQDRNEKL 82

Query: 496  FYRVLTSDVEKFMPIVYTPTVGLACQHYGLTFRRPRGLFITIHDKGHLPTMLNSWPEDDI 675
            FY+VL SD+EKFMPIVYTPTVGLACQ Y L FR+PRGLFI+IHD+GH+ ++LN+WPED I
Sbjct: 83   FYKVLMSDIEKFMPIVYTPTVGLACQQYSLAFRKPRGLFISIHDRGHISSVLNAWPEDVI 142

Query: 676  KAVVVTDGERILGLGDLGCYGMGIPVGKLALYTACGGVNPRQCLPVLLDVGTNNEELLRD 855
            KA+VVTDGERILGLGDLGC GMGIPVGKLALYTACGG+NP+QCLPV+LDVGT NEELL+D
Sbjct: 143  KAIVVTDGERILGLGDLGCNGMGIPVGKLALYTACGGMNPQQCLPVMLDVGTENEELLKD 202

Query: 856  PLYIGLKHRRVRGQDYDDLLDEFMQAVTDKFGINCLIQFEDFANANAFRLLNKYRNKYCM 1035
            PLYIGL+ RRVRG +YDD LDEFM+AV+ K+G+NCLIQFEDFAN NAFRLL KY+N+YC 
Sbjct: 203  PLYIGLRQRRVRGPEYDDFLDEFMEAVSLKYGMNCLIQFEDFANINAFRLLRKYQNQYCT 262

Query: 1036 FNDDIQGTASVAVAGILAALRITKNKLSNHVFVFQGAGEAAMGIAHLLVMALEKEGVPKA 1215
            FNDDIQGTASVAVAGILAALRITKNKLS    +FQGAGEAA+GIAHL+VMA+EKEG+ K 
Sbjct: 263  FNDDIQGTASVAVAGILAALRITKNKLSEQTVLFQGAGEAALGIAHLIVMAMEKEGLSKE 322

Query: 1216 EATRKIWMVDSRGLIVKGRSHLNHEKEMFAQDHPXXXXXXXXXXXXKPTXXXXXXXXXXX 1395
            +A  KIW+VDS+GLIVKGR+ L  E E FA +H             KPT           
Sbjct: 323  QAIEKIWLVDSKGLIVKGRAALTQEIEEFAHEHKEMKNLEAIVQDIKPTALIGVAAIGGA 382

Query: 1396 FTEQILRDMASFHERPIIFALSNPTSKAECTAEKCYRVTEGRGIFASGSPFKSVTLEDGR 1575
            F+EQI++DMA+F+ERPIIFALSNPTSKAECTAE+CY++T+GR IFASGSPF  VTL  G+
Sbjct: 383  FSEQIIKDMAAFNERPIIFALSNPTSKAECTAEQCYKLTKGRAIFASGSPFDPVTLPSGK 442

Query: 1576 TFIPGQGNNAYVFPGVALGVIAGGIRHIPDEIFLLTAEQIAQEVSEQHLSQGRLYPPLST 1755
            +  PGQGNN+YVFPGVALGV+A G+RHI D+IFL TAE IAQ+VS++HL +GRLYPPL T
Sbjct: 443  SLYPGQGNNSYVFPGVALGVVACGLRHITDKIFLTTAEVIAQQVSDKHLEEGRLYPPLDT 502

Query: 1756 IRDVSLRIAIKVLDYAYKHNLASYYPEPKDKEAFVRSLVYTPDYDSFTLDSYTWPKEAMN 1935
            IRDVSL+IA K++  AY+   A+ YPEP +KEAFVRS +Y+ DYD    D Y WPKEA  
Sbjct: 503  IRDVSLKIAEKIVKDAYQEKTATVYPEPPNKEAFVRSQMYSTDYDQILPDCYPWPKEAQK 562

Query: 1936 VQ 1941
            +Q
Sbjct: 563  IQ 564


>ref|NP_001070282.1| NAD-dependent malic enzyme, mitochondrial [Bos taurus].
          Length = 584

 Score =  636 bits (1640), Expect = 0.0
 Identities = 309/560 (55%), Positives = 404/560 (72%), Gaps = 3/560 (0%)
 Frame = +1

Query: 259  RPVPLKKRGYDVTRNPHLNKGMAFTLEERLQLGIHGLIPPCFLSQDVQLLRIMRYYERQQ 438
            R +  K++G  +  NP  NKGMAFTL+ER  LG+ GL+PP   +QD+Q LR  R  ++  
Sbjct: 17   RHLHTKEKGKPLMLNPRTNKGMAFTLQERQMLGLQGLLPPKIETQDIQALRFHRNLKKLN 76

Query: 439  SDLDKYIILMTLQDRNEKLFYRVLTSDVEKFMPIVYTPTVGLACQHYGLTFRRPRGLFIT 618
              L+KYI +M +Q+RNEKLFYR+L  D+E  MPIVYTPTVGLAC  YG  FRRP+GLFI+
Sbjct: 77   GPLEKYIYIMGIQERNEKLFYRILQDDIETLMPIVYTPTVGLACSQYGHIFRRPKGLFIS 136

Query: 619  IHDKGHLPTMLNSWPEDDIKAVVVTDGERILGLGDLGCYGMGIPVGKLALYTACGGVNPR 798
            I D+GH+ +++++WPE+ +KAVVVTDGERILGLGDLG YGMGIPVGKL LYTAC G+ P 
Sbjct: 137  ISDRGHVRSIVDNWPENHVKAVVVTDGERILGLGDLGVYGMGIPVGKLCLYTACAGIRPD 196

Query: 799  QCLPVLLDVGTNNEELLRDPLYIGLKHRRVRGQDYDDLLDEFMQAVTDKFGINCLIQFED 978
            +CLPV +DVGT+N  LL+DP Y+GL  +R R Q YDDL+DEFM+A+TD++G N LIQFED
Sbjct: 197  RCLPVCIDVGTDNPALLKDPFYMGLYQKRDRSQRYDDLIDEFMKAITDRYGQNTLIQFED 256

Query: 979  FANANAFRLLNKYRNKYCMFNDDIQGTASVAVAGILAALRITKNKLSNHVFVFQGAGEAA 1158
            F N NAFR L KYR KYC FNDDIQGTA+VA+AG+LAA ++    +S+H  +F GAGEAA
Sbjct: 257  FGNHNAFRFLRKYREKYCTFNDDIQGTAAVALAGLLAAQKVIGKPISDHRILFLGAGEAA 316

Query: 1159 MGIAHLLVMALEKEGVPKAEATRKIWMVDSRGLIVKGR-SHLNHEKEMFAQDHP--XXXX 1329
            +GIA+L+VMA+ + G+ + EA +KIWMVD  GL+ KGR + +   +E FA   P      
Sbjct: 317  LGIANLIVMAMVENGLSEEEARKKIWMVDKFGLLFKGRKAKIESHQEAFAHSAPESLPDT 376

Query: 1330 XXXXXXXXKPTXXXXXXXXXXXFTEQILRDMASFHERPIIFALSNPTSKAECTAEKCYRV 1509
                    KP+           FT  +++ MA  +ERPIIFALSNPT++AECTAE+ Y +
Sbjct: 377  FEEAVNILKPSAIIGVAGAGRLFTPGVIKAMAEINERPIIFALSNPTAQAECTAEEAYTL 436

Query: 1510 TEGRGIFASGSPFKSVTLEDGRTFIPGQGNNAYVFPGVALGVIAGGIRHIPDEIFLLTAE 1689
            TEGR +FASGSPF+ V L DG+ F PGQGNN Y+FPGVAL VI    RHI D +FL  A+
Sbjct: 437  TEGRCLFASGSPFEPVKLSDGQVFTPGQGNNVYIFPGVALAVILCNTRHISDHVFLEAAK 496

Query: 1690 QIAQEVSEQHLSQGRLYPPLSTIRDVSLRIAIKVLDYAYKHNLASYYPEPKDKEAFVRSL 1869
             +  +++++ L+QGRLYPPLS I++VS+ IAIKV +Y Y + +A  YPEP+DK  ++R  
Sbjct: 497  ALTSQLTDKELAQGRLYPPLSNIQEVSINIAIKVTEYLYANKMAFRYPEPEDKAKYIRER 556

Query: 1870 VYTPDYDSFTLDSYTWPKEA 1929
            ++  +YDS   D Y WP+ A
Sbjct: 557  IWRSEYDSLLPDVYEWPEAA 576


>ref|XP_002683959.1| PREDICTED: predicted protein-like, partial [Bos taurus].
          Length = 341

 Score = 62.0 bits (149), Expect = 2e-09
 Identities = 83/343 (24%), Positives = 126/343 (36%), Gaps = 4/343 (1%)
 Frame = +1

Query: 685  VVTDGERILGLGDLG-CYGMGIPVGKLALYTACGGVNPRQCLPVLLDVGTNNEELLRDPL 861
            V++DG  ILGLG+LG      +  GK  L+    G++       + D+  ++E       
Sbjct: 37   VISDGTAILGLGNLGPLASKPVMEGKGVLFKRFAGID-------VFDIEVDSES------ 83

Query: 862  YIGLKHRRVRGQDYDDLLDEFMQAVTDKFGINCLIQFEDFANANAFRLLNKYRNKYC--- 1032
                               + ++ ++  FG    I  ED      F +  +   + C   
Sbjct: 84   --------------PQAFIDTVKRISITFGG---INLEDIKAPECFEI-ERALIEQCDIP 125

Query: 1033 MFNDDIQGTASVAVAGILAALRITKNKLSNHVFVFQGAGEAAMGIAHLLVMALEKEGVPK 1212
            +F+DD  GTA V  AG++ AL I    L     V  GAG AA+    LLV    K     
Sbjct: 126  VFHDDQHGTAIVTAAGMINALEIAGKTLPEAKIVCLGAGAAAISCMKLLVSMGAK----- 180

Query: 1213 AEATRKIWMVDSRGLIVKGRSHLNHEKEMFAQDHPXXXXXXXXXXXXKPTXXXXXXXXXX 1392
                  I+MVD  G+I  GR  LN  K +FA                +            
Sbjct: 181  ---IENIFMVDRTGVIHSGRDDLNQYKAVFAH----TTDKRSLADALQGADVFVGLSGPN 233

Query: 1393 XFTEQILRDMASFHERPIIFALSNPTSKAECTAEKCYRVTEGRGIFASGSPFKSVTLEDG 1572
              + + L  MA+    PI+FA SNP  +         R                V +  G
Sbjct: 234  LLSAEGLLSMAA---NPIVFACSNPDPEISPELAHATR--------------SDVIMATG 276

Query: 1573 RTFIPGQGNNAYVFPGVALGVIAGGIRHIPDEIFLLTAEQIAQ 1701
            R+  P Q NN   FP +  G +    + I +E+ +  A  + +
Sbjct: 277  RSDYPNQVNNVLGFPFIFRGALDVRAKRINEEMKVAAANALRE 319


  Database: RefSeq49_BP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 17,681,374
  Number of sequences in database:  33,088
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33088
Number of Hits to DB: 79,088,036
Number of extensions: 2309718
Number of successful extensions: 10849
Number of sequences better than 1.0e-05: 4
Number of HSP's gapped: 10742
Number of HSP's successfully gapped: 5
Length of query: 680
Length of database: 17,681,374
Length adjustment: 109
Effective length of query: 571
Effective length of database: 14,074,782
Effective search space: 8036700522
Effective search space used: 8036700522
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Animal-Genome cDNA HTMT1_0093_E12

Animal-Genome cDNA HTMT1_0093_E12


Search to RefSeqHP_Rel49

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= HTMT1_0093_E12
         (2042 letters)

Database: RefSeq49_HP.fasta 
           32,964 sequences; 18,297,164 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_001155058.1| NADP-dependent malic enzyme, mitochondrial p...  1103   0.0  
Alignment   gi|NP_001014811.1| NADP-dependent malic enzyme, mitochondrial p...  1103   0.0  
Alignment   gi|NP_006671.2| NADP-dependent malic enzyme, mitochondrial prec...  1103   0.0  
Alignment   gi|NP_002386.1| NADP-dependent malic enzyme [Homo sapiens].          816   0.0  
Alignment   gi|NP_002387.1| NAD-dependent malic enzyme, mitochondrial isofo...   637   0.0  
Alignment   gi|NP_001161807.1| NAD-dependent malic enzyme, mitochondrial is...   538   e-153

>ref|NP_001155058.1| NADP-dependent malic enzyme, mitochondrial precursor [Homo sapiens].
          Length = 604

 Score = 1103 bits (2854), Expect = 0.0
 Identities = 549/604 (90%), Positives = 560/604 (92%)
 Frame = +1

Query: 136  MGASLGSGARVALLPRQACGAVXXXXXXXXXXGCHSKTGLPRPVPLKKRGYDVTRNPHLN 315
            MGA+LG+G R+A  P +ACGA+          GCHSK G  RPVPLKKRGYDVTRNPHLN
Sbjct: 1    MGAALGTGTRLAPWPGRACGALPRWTPTAPAQGCHSKPGPARPVPLKKRGYDVTRNPHLN 60

Query: 316  KGMAFTLEERLQLGIHGLIPPCFLSQDVQLLRIMRYYERQQSDLDKYIILMTLQDRNEKL 495
            KGMAFTLEERLQLGIHGLIPPCFLSQDVQLLRIMRYYERQQSDLDKYIILMTLQDRNEKL
Sbjct: 61   KGMAFTLEERLQLGIHGLIPPCFLSQDVQLLRIMRYYERQQSDLDKYIILMTLQDRNEKL 120

Query: 496  FYRVLTSDVEKFMPIVYTPTVGLACQHYGLTFRRPRGLFITIHDKGHLPTMLNSWPEDDI 675
            FYRVLTSDVEKFMPIVYTPTVGLACQHYGLTFRRPRGLFITIHDKGHL TMLNSWPED+I
Sbjct: 121  FYRVLTSDVEKFMPIVYTPTVGLACQHYGLTFRRPRGLFITIHDKGHLATMLNSWPEDNI 180

Query: 676  KAVVVTDGERILGLGDLGCYGMGIPVGKLALYTACGGVNPRQCLPVLLDVGTNNEELLRD 855
            KAVVVTDGERILGLGDLGCYGMGIPVGKLALYTACGGVNP+QCLPVLLDVGTNNEELLRD
Sbjct: 181  KAVVVTDGERILGLGDLGCYGMGIPVGKLALYTACGGVNPQQCLPVLLDVGTNNEELLRD 240

Query: 856  PLYIGLKHRRVRGQDYDDLLDEFMQAVTDKFGINCLIQFEDFANANAFRLLNKYRNKYCM 1035
            PLYIGLKH+RV G+ YDDLLDEFMQAVTDKFGINCLIQFEDFANANAFRLLNKYRNKYCM
Sbjct: 241  PLYIGLKHQRVHGKAYDDLLDEFMQAVTDKFGINCLIQFEDFANANAFRLLNKYRNKYCM 300

Query: 1036 FNDDIQGTASVAVAGILAALRITKNKLSNHVFVFQGAGEAAMGIAHLLVMALEKEGVPKA 1215
            FNDDIQGTASVAVAGILAALRITKNKLSNHVFVFQGAGEAAMGIAHLLVMALEKEGVPKA
Sbjct: 301  FNDDIQGTASVAVAGILAALRITKNKLSNHVFVFQGAGEAAMGIAHLLVMALEKEGVPKA 360

Query: 1216 EATRKIWMVDSRGLIVKGRSHLNHEKEMFAQDHPXXXXXXXXXXXXKPTXXXXXXXXXXX 1395
            EATRKIWMVDS+GLIVKGRSHLNHEKEMFAQDHP            KPT           
Sbjct: 361  EATRKIWMVDSKGLIVKGRSHLNHEKEMFAQDHPEVNSLEEVVRLVKPTAIIGVAAIAGA 420

Query: 1396 FTEQILRDMASFHERPIIFALSNPTSKAECTAEKCYRVTEGRGIFASGSPFKSVTLEDGR 1575
            FTEQILRDMASFHERPIIFALSNPTSKAECTAEKCYRVTEGRGIFASGSPFKSVTLEDG+
Sbjct: 421  FTEQILRDMASFHERPIIFALSNPTSKAECTAEKCYRVTEGRGIFASGSPFKSVTLEDGK 480

Query: 1576 TFIPGQGNNAYVFPGVALGVIAGGIRHIPDEIFLLTAEQIAQEVSEQHLSQGRLYPPLST 1755
            TFIPGQGNNAYVFPGVALGVIAGGIRHIPDEIFLLTAEQIAQEVSEQHLSQGRLYPPLST
Sbjct: 481  TFIPGQGNNAYVFPGVALGVIAGGIRHIPDEIFLLTAEQIAQEVSEQHLSQGRLYPPLST 540

Query: 1756 IRDVSLRIAIKVLDYAYKHNLASYYPEPKDKEAFVRSLVYTPDYDSFTLDSYTWPKEAMN 1935
            IRDVSLRIAIKVLDYAYKHNLASYYPEPKDKEAFVRSLVYTPDYDSFTLDSYTWPKEAMN
Sbjct: 541  IRDVSLRIAIKVLDYAYKHNLASYYPEPKDKEAFVRSLVYTPDYDSFTLDSYTWPKEAMN 600

Query: 1936 VQNV 1947
            VQ V
Sbjct: 601  VQTV 604


>ref|NP_001014811.1| NADP-dependent malic enzyme, mitochondrial precursor [Homo sapiens].
          Length = 604

 Score = 1103 bits (2854), Expect = 0.0
 Identities = 549/604 (90%), Positives = 560/604 (92%)
 Frame = +1

Query: 136  MGASLGSGARVALLPRQACGAVXXXXXXXXXXGCHSKTGLPRPVPLKKRGYDVTRNPHLN 315
            MGA+LG+G R+A  P +ACGA+          GCHSK G  RPVPLKKRGYDVTRNPHLN
Sbjct: 1    MGAALGTGTRLAPWPGRACGALPRWTPTAPAQGCHSKPGPARPVPLKKRGYDVTRNPHLN 60

Query: 316  KGMAFTLEERLQLGIHGLIPPCFLSQDVQLLRIMRYYERQQSDLDKYIILMTLQDRNEKL 495
            KGMAFTLEERLQLGIHGLIPPCFLSQDVQLLRIMRYYERQQSDLDKYIILMTLQDRNEKL
Sbjct: 61   KGMAFTLEERLQLGIHGLIPPCFLSQDVQLLRIMRYYERQQSDLDKYIILMTLQDRNEKL 120

Query: 496  FYRVLTSDVEKFMPIVYTPTVGLACQHYGLTFRRPRGLFITIHDKGHLPTMLNSWPEDDI 675
            FYRVLTSDVEKFMPIVYTPTVGLACQHYGLTFRRPRGLFITIHDKGHL TMLNSWPED+I
Sbjct: 121  FYRVLTSDVEKFMPIVYTPTVGLACQHYGLTFRRPRGLFITIHDKGHLATMLNSWPEDNI 180

Query: 676  KAVVVTDGERILGLGDLGCYGMGIPVGKLALYTACGGVNPRQCLPVLLDVGTNNEELLRD 855
            KAVVVTDGERILGLGDLGCYGMGIPVGKLALYTACGGVNP+QCLPVLLDVGTNNEELLRD
Sbjct: 181  KAVVVTDGERILGLGDLGCYGMGIPVGKLALYTACGGVNPQQCLPVLLDVGTNNEELLRD 240

Query: 856  PLYIGLKHRRVRGQDYDDLLDEFMQAVTDKFGINCLIQFEDFANANAFRLLNKYRNKYCM 1035
            PLYIGLKH+RV G+ YDDLLDEFMQAVTDKFGINCLIQFEDFANANAFRLLNKYRNKYCM
Sbjct: 241  PLYIGLKHQRVHGKAYDDLLDEFMQAVTDKFGINCLIQFEDFANANAFRLLNKYRNKYCM 300

Query: 1036 FNDDIQGTASVAVAGILAALRITKNKLSNHVFVFQGAGEAAMGIAHLLVMALEKEGVPKA 1215
            FNDDIQGTASVAVAGILAALRITKNKLSNHVFVFQGAGEAAMGIAHLLVMALEKEGVPKA
Sbjct: 301  FNDDIQGTASVAVAGILAALRITKNKLSNHVFVFQGAGEAAMGIAHLLVMALEKEGVPKA 360

Query: 1216 EATRKIWMVDSRGLIVKGRSHLNHEKEMFAQDHPXXXXXXXXXXXXKPTXXXXXXXXXXX 1395
            EATRKIWMVDS+GLIVKGRSHLNHEKEMFAQDHP            KPT           
Sbjct: 361  EATRKIWMVDSKGLIVKGRSHLNHEKEMFAQDHPEVNSLEEVVRLVKPTAIIGVAAIAGA 420

Query: 1396 FTEQILRDMASFHERPIIFALSNPTSKAECTAEKCYRVTEGRGIFASGSPFKSVTLEDGR 1575
            FTEQILRDMASFHERPIIFALSNPTSKAECTAEKCYRVTEGRGIFASGSPFKSVTLEDG+
Sbjct: 421  FTEQILRDMASFHERPIIFALSNPTSKAECTAEKCYRVTEGRGIFASGSPFKSVTLEDGK 480

Query: 1576 TFIPGQGNNAYVFPGVALGVIAGGIRHIPDEIFLLTAEQIAQEVSEQHLSQGRLYPPLST 1755
            TFIPGQGNNAYVFPGVALGVIAGGIRHIPDEIFLLTAEQIAQEVSEQHLSQGRLYPPLST
Sbjct: 481  TFIPGQGNNAYVFPGVALGVIAGGIRHIPDEIFLLTAEQIAQEVSEQHLSQGRLYPPLST 540

Query: 1756 IRDVSLRIAIKVLDYAYKHNLASYYPEPKDKEAFVRSLVYTPDYDSFTLDSYTWPKEAMN 1935
            IRDVSLRIAIKVLDYAYKHNLASYYPEPKDKEAFVRSLVYTPDYDSFTLDSYTWPKEAMN
Sbjct: 541  IRDVSLRIAIKVLDYAYKHNLASYYPEPKDKEAFVRSLVYTPDYDSFTLDSYTWPKEAMN 600

Query: 1936 VQNV 1947
            VQ V
Sbjct: 601  VQTV 604


>ref|NP_006671.2| NADP-dependent malic enzyme, mitochondrial precursor [Homo sapiens].
          Length = 604

 Score = 1103 bits (2854), Expect = 0.0
 Identities = 549/604 (90%), Positives = 560/604 (92%)
 Frame = +1

Query: 136  MGASLGSGARVALLPRQACGAVXXXXXXXXXXGCHSKTGLPRPVPLKKRGYDVTRNPHLN 315
            MGA+LG+G R+A  P +ACGA+          GCHSK G  RPVPLKKRGYDVTRNPHLN
Sbjct: 1    MGAALGTGTRLAPWPGRACGALPRWTPTAPAQGCHSKPGPARPVPLKKRGYDVTRNPHLN 60

Query: 316  KGMAFTLEERLQLGIHGLIPPCFLSQDVQLLRIMRYYERQQSDLDKYIILMTLQDRNEKL 495
            KGMAFTLEERLQLGIHGLIPPCFLSQDVQLLRIMRYYERQQSDLDKYIILMTLQDRNEKL
Sbjct: 61   KGMAFTLEERLQLGIHGLIPPCFLSQDVQLLRIMRYYERQQSDLDKYIILMTLQDRNEKL 120

Query: 496  FYRVLTSDVEKFMPIVYTPTVGLACQHYGLTFRRPRGLFITIHDKGHLPTMLNSWPEDDI 675
            FYRVLTSDVEKFMPIVYTPTVGLACQHYGLTFRRPRGLFITIHDKGHL TMLNSWPED+I
Sbjct: 121  FYRVLTSDVEKFMPIVYTPTVGLACQHYGLTFRRPRGLFITIHDKGHLATMLNSWPEDNI 180

Query: 676  KAVVVTDGERILGLGDLGCYGMGIPVGKLALYTACGGVNPRQCLPVLLDVGTNNEELLRD 855
            KAVVVTDGERILGLGDLGCYGMGIPVGKLALYTACGGVNP+QCLPVLLDVGTNNEELLRD
Sbjct: 181  KAVVVTDGERILGLGDLGCYGMGIPVGKLALYTACGGVNPQQCLPVLLDVGTNNEELLRD 240

Query: 856  PLYIGLKHRRVRGQDYDDLLDEFMQAVTDKFGINCLIQFEDFANANAFRLLNKYRNKYCM 1035
            PLYIGLKH+RV G+ YDDLLDEFMQAVTDKFGINCLIQFEDFANANAFRLLNKYRNKYCM
Sbjct: 241  PLYIGLKHQRVHGKAYDDLLDEFMQAVTDKFGINCLIQFEDFANANAFRLLNKYRNKYCM 300

Query: 1036 FNDDIQGTASVAVAGILAALRITKNKLSNHVFVFQGAGEAAMGIAHLLVMALEKEGVPKA 1215
            FNDDIQGTASVAVAGILAALRITKNKLSNHVFVFQGAGEAAMGIAHLLVMALEKEGVPKA
Sbjct: 301  FNDDIQGTASVAVAGILAALRITKNKLSNHVFVFQGAGEAAMGIAHLLVMALEKEGVPKA 360

Query: 1216 EATRKIWMVDSRGLIVKGRSHLNHEKEMFAQDHPXXXXXXXXXXXXKPTXXXXXXXXXXX 1395
            EATRKIWMVDS+GLIVKGRSHLNHEKEMFAQDHP            KPT           
Sbjct: 361  EATRKIWMVDSKGLIVKGRSHLNHEKEMFAQDHPEVNSLEEVVRLVKPTAIIGVAAIAGA 420

Query: 1396 FTEQILRDMASFHERPIIFALSNPTSKAECTAEKCYRVTEGRGIFASGSPFKSVTLEDGR 1575
            FTEQILRDMASFHERPIIFALSNPTSKAECTAEKCYRVTEGRGIFASGSPFKSVTLEDG+
Sbjct: 421  FTEQILRDMASFHERPIIFALSNPTSKAECTAEKCYRVTEGRGIFASGSPFKSVTLEDGK 480

Query: 1576 TFIPGQGNNAYVFPGVALGVIAGGIRHIPDEIFLLTAEQIAQEVSEQHLSQGRLYPPLST 1755
            TFIPGQGNNAYVFPGVALGVIAGGIRHIPDEIFLLTAEQIAQEVSEQHLSQGRLYPPLST
Sbjct: 481  TFIPGQGNNAYVFPGVALGVIAGGIRHIPDEIFLLTAEQIAQEVSEQHLSQGRLYPPLST 540

Query: 1756 IRDVSLRIAIKVLDYAYKHNLASYYPEPKDKEAFVRSLVYTPDYDSFTLDSYTWPKEAMN 1935
            IRDVSLRIAIKVLDYAYKHNLASYYPEPKDKEAFVRSLVYTPDYDSFTLDSYTWPKEAMN
Sbjct: 541  IRDVSLRIAIKVLDYAYKHNLASYYPEPKDKEAFVRSLVYTPDYDSFTLDSYTWPKEAMN 600

Query: 1936 VQNV 1947
            VQ V
Sbjct: 601  VQTV 604


>ref|NP_002386.1| NADP-dependent malic enzyme [Homo sapiens].
          Length = 572

 Score =  816 bits (2109), Expect = 0.0
 Identities = 391/562 (69%), Positives = 468/562 (83%)
 Frame = +1

Query: 256  PRPVPLKKRGYDVTRNPHLNKGMAFTLEERLQLGIHGLIPPCFLSQDVQLLRIMRYYERQ 435
            PR     +RGY +TRNPHLNK +AFTLEER QL IHGL+PP F SQ++Q+LR+++ +E  
Sbjct: 6    PRRRHTHQRGYLLTRNPHLNKDLAFTLEERQQLNIHGLLPPSFNSQEIQVLRVVKNFEHL 65

Query: 436  QSDLDKYIILMTLQDRNEKLFYRVLTSDVEKFMPIVYTPTVGLACQHYGLTFRRPRGLFI 615
             SD D+Y++LM LQDRNEKLFYRVLTSD+EKFMPIVYTPTVGLACQ Y L FR+PRGLFI
Sbjct: 66   NSDFDRYLLLMDLQDRNEKLFYRVLTSDIEKFMPIVYTPTVGLACQQYSLVFRKPRGLFI 125

Query: 616  TIHDKGHLPTMLNSWPEDDIKAVVVTDGERILGLGDLGCYGMGIPVGKLALYTACGGVNP 795
            TIHD+GH+ ++LN+WPED IKA+VVTDGERILGLGDLGC GMGIPVGKLALYTACGG+NP
Sbjct: 126  TIHDRGHIASVLNAWPEDVIKAIVVTDGERILGLGDLGCNGMGIPVGKLALYTACGGMNP 185

Query: 796  RQCLPVLLDVGTNNEELLRDPLYIGLKHRRVRGQDYDDLLDEFMQAVTDKFGINCLIQFE 975
            ++CLPV+LDVGT NEELL+DPLYIGL+ RRVRG +YDD LDEFM+AV+ K+G+NCLIQFE
Sbjct: 186  QECLPVILDVGTENEELLKDPLYIGLRQRRVRGSEYDDFLDEFMEAVSSKYGMNCLIQFE 245

Query: 976  DFANANAFRLLNKYRNKYCMFNDDIQGTASVAVAGILAALRITKNKLSNHVFVFQGAGEA 1155
            DFAN NAFRLLNKYRN+YC FNDDIQGTASVAVAG+LAALRITKNKLS+   +FQGAGEA
Sbjct: 246  DFANVNAFRLLNKYRNQYCTFNDDIQGTASVAVAGLLAALRITKNKLSDQTILFQGAGEA 305

Query: 1156 AMGIAHLLVMALEKEGVPKAEATRKIWMVDSRGLIVKGRSHLNHEKEMFAQDHPXXXXXX 1335
            A+GIAHL+VMALEKEG+PK +A +KIW+VDS+GLIVKGR+ L  EKE FA +H       
Sbjct: 306  ALGIAHLIVMALEKEGLPKEKAIKKIWLVDSKGLIVKGRASLTQEKEKFAHEHEEMKNLE 365

Query: 1336 XXXXXXKPTXXXXXXXXXXXFTEQILRDMASFHERPIIFALSNPTSKAECTAEKCYRVTE 1515
                  KPT           F+EQIL+DMA+F+ERPIIFALSNPTSKAEC+AE+CY++T+
Sbjct: 366  AIVQEIKPTALIGVAAIGGAFSEQILKDMAAFNERPIIFALSNPTSKAECSAEQCYKITK 425

Query: 1516 GRGIFASGSPFKSVTLEDGRTFIPGQGNNAYVFPGVALGVIAGGIRHIPDEIFLLTAEQI 1695
            GR IFASGSPF  VTL +G+T  PGQGNN+YVFPGVALGV+A G+R I D IFL TAE I
Sbjct: 426  GRAIFASGSPFDPVTLPNGQTLYPGQGNNSYVFPGVALGVVACGLRQITDNIFLTTAEVI 485

Query: 1696 AQEVSEQHLSQGRLYPPLSTIRDVSLRIAIKVLDYAYKHNLASYYPEPKDKEAFVRSLVY 1875
            AQ+VS++HL +GRLYPPL+TIRDVSL+IA K++  AY+   A+ YPEP++KEAFVRS +Y
Sbjct: 486  AQQVSDKHLEEGRLYPPLNTIRDVSLKIAEKIVKDAYQEKTATVYPEPQNKEAFVRSQMY 545

Query: 1876 TPDYDSFTLDSYTWPKEAMNVQ 1941
            + DYD    D Y+WP+E   +Q
Sbjct: 546  STDYDQILPDCYSWPEEVQKIQ 567


>ref|NP_002387.1| NAD-dependent malic enzyme, mitochondrial isoform 1 precursor [Homo
            sapiens].
          Length = 584

 Score =  637 bits (1643), Expect = 0.0
 Identities = 309/560 (55%), Positives = 404/560 (72%), Gaps = 3/560 (0%)
 Frame = +1

Query: 259  RPVPLKKRGYDVTRNPHLNKGMAFTLEERLQLGIHGLIPPCFLSQDVQLLRIMRYYERQQ 438
            R + +K++G  +  NP  NKGMAFTL+ER  LG+ GL+PP   +QD+Q LR  R  ++  
Sbjct: 17   RHLHIKEKGKPLMLNPRTNKGMAFTLQERQMLGLQGLLPPKIETQDIQALRFHRNLKKMT 76

Query: 439  SDLDKYIILMTLQDRNEKLFYRVLTSDVEKFMPIVYTPTVGLACQHYGLTFRRPRGLFIT 618
            S L+KYI +M +Q+RNEKLFYR+L  D+E  MPIVYTPTVGLAC  YG  FRRP+GLFI+
Sbjct: 77   SPLEKYIYIMGIQERNEKLFYRILQDDIESLMPIVYTPTVGLACSQYGHIFRRPKGLFIS 136

Query: 619  IHDKGHLPTMLNSWPEDDIKAVVVTDGERILGLGDLGCYGMGIPVGKLALYTACGGVNPR 798
            I D+GH+ +++++WPE+ +KAVVVTDGERILGLGDLG YGMGIPVGKL LYTAC G+ P 
Sbjct: 137  ISDRGHVRSIVDNWPENHVKAVVVTDGERILGLGDLGVYGMGIPVGKLCLYTACAGIRPD 196

Query: 799  QCLPVLLDVGTNNEELLRDPLYIGLKHRRVRGQDYDDLLDEFMQAVTDKFGINCLIQFED 978
            +CLPV +DVGT+N  LL+DP Y+GL  +R R Q YDDL+DEFM+A+TD++G N LIQFED
Sbjct: 197  RCLPVCIDVGTDNIALLKDPFYMGLYQKRDRTQQYDDLIDEFMKAITDRYGRNTLIQFED 256

Query: 979  FANANAFRLLNKYRNKYCMFNDDIQGTASVAVAGILAALRITKNKLSNHVFVFQGAGEAA 1158
            F N NAFR L KYR KYC FNDDIQGTA+VA+AG+LAA ++    +S H  +F GAGEAA
Sbjct: 257  FGNHNAFRFLRKYREKYCTFNDDIQGTAAVALAGLLAAQKVISKPISEHKILFLGAGEAA 316

Query: 1159 MGIAHLLVMALEKEGVPKAEATRKIWMVDSRGLIVKGR-SHLNHEKEMFAQDHP--XXXX 1329
            +GIA+L+VM++ + G+ + EA +KIWM D  GL+VKGR + ++  +E F    P      
Sbjct: 317  LGIANLIVMSMVENGLSEQEAQKKIWMFDKYGLLVKGRKAKIDSYQEPFTHSAPESIPDT 376

Query: 1330 XXXXXXXXKPTXXXXXXXXXXXFTEQILRDMASFHERPIIFALSNPTSKAECTAEKCYRV 1509
                    KP+           FT  ++R MAS +ERP+IFALSNPT++AECTAE+ Y +
Sbjct: 377  FEDAVNILKPSTIIGVAGAGRLFTPDVIRAMASINERPVIFALSNPTAQAECTAEEAYTL 436

Query: 1510 TEGRGIFASGSPFKSVTLEDGRTFIPGQGNNAYVFPGVALGVIAGGIRHIPDEIFLLTAE 1689
            TEGR +FASGSPF  V L DGR F PGQGNN Y+FPGVAL VI    RHI D +FL  A+
Sbjct: 437  TEGRCLFASGSPFGPVKLTDGRVFTPGQGNNVYIFPGVALAVILCNTRHISDSVFLEAAK 496

Query: 1690 QIAQEVSEQHLSQGRLYPPLSTIRDVSLRIAIKVLDYAYKHNLASYYPEPKDKEAFVRSL 1869
             +  +++++ L+QGRLYPPL+ I++VS+ IAIKV +Y Y + +A  YPEP+DK  +V+  
Sbjct: 497  ALTSQLTDEELAQGRLYPPLANIQEVSINIAIKVTEYLYANKMAFRYPEPEDKAKYVKER 556

Query: 1870 VYTPDYDSFTLDSYTWPKEA 1929
             +  +YDS   D Y WP+ A
Sbjct: 557  TWRSEYDSLLPDVYEWPESA 576


>ref|NP_001161807.1| NAD-dependent malic enzyme, mitochondrial isoform 2 precursor [Homo
            sapiens].
          Length = 479

 Score =  538 bits (1387), Expect = e-153
 Identities = 262/462 (56%), Positives = 337/462 (72%), Gaps = 3/462 (0%)
 Frame = +1

Query: 259  RPVPLKKRGYDVTRNPHLNKGMAFTLEERLQLGIHGLIPPCFLSQDVQLLRIMRYYERQQ 438
            R + +K++G  +  NP  NKGMAFTL+ER  LG+ GL+PP   +QD+Q LR  R  ++  
Sbjct: 17   RHLHIKEKGKPLMLNPRTNKGMAFTLQERQMLGLQGLLPPKIETQDIQALRFHRNLKKMT 76

Query: 439  SDLDKYIILMTLQDRNEKLFYRVLTSDVEKFMPIVYTPTVGLACQHYGLTFRRPRGLFIT 618
            S L+KYI +M +Q+RNEKLFYR+L  D+E  MPIVYTPTVGLAC  YG  FRRP+GLFI+
Sbjct: 77   SPLEKYIYIMGIQERNEKLFYRILQDDIESLMPIVYTPTVGLACSQYGHIFRRPKGLFIS 136

Query: 619  IHDKGHLPTMLNSWPEDDIKAVVVTDGERILGLGDLGCYGMGIPVGKLALYTACGGVNPR 798
            I D+GH+ +++++WPE+ +KAVVVTDGERILGLGDLG YGMGIPVGKL LYTAC G+ P 
Sbjct: 137  ISDRGHVRSIVDNWPENHVKAVVVTDGERILGLGDLGVYGMGIPVGKLCLYTACAGIRPD 196

Query: 799  QCLPVLLDVGTNNEELLRDPLYIGLKHRRVRGQDYDDLLDEFMQAVTDKFGINCLIQFED 978
            +CLPV +DVGT+N  LL+DP Y+GL  +R R Q YDDL+DEFM+A+TD++G N LIQFED
Sbjct: 197  RCLPVCIDVGTDNIALLKDPFYMGLYQKRDRTQQYDDLIDEFMKAITDRYGRNTLIQFED 256

Query: 979  FANANAFRLLNKYRNKYCMFNDDIQGTASVAVAGILAALRITKNKLSNHVFVFQGAGEAA 1158
            F N NAFR L KYR KYC FNDDIQGTA+VA+AG+LAA ++    +S H  +F GAGEAA
Sbjct: 257  FGNHNAFRFLRKYREKYCTFNDDIQGTAAVALAGLLAAQKVISKPISEHKILFLGAGEAA 316

Query: 1159 MGIAHLLVMALEKEGVPKAEATRKIWMVDSRGLIVKGR-SHLNHEKEMFAQDHP--XXXX 1329
            +GIA+L+VM++ + G+ + EA +KIWM D  GL+VKGR + ++  +E F    P      
Sbjct: 317  LGIANLIVMSMVENGLSEQEAQKKIWMFDKYGLLVKGRKAKIDSYQEPFTHSAPESIPDT 376

Query: 1330 XXXXXXXXKPTXXXXXXXXXXXFTEQILRDMASFHERPIIFALSNPTSKAECTAEKCYRV 1509
                    KP+           FT  ++R MAS +ERP+IFALSNPT++AECTAE+ Y +
Sbjct: 377  FEDAVNILKPSTIIGVAGAGRLFTPDVIRAMASINERPVIFALSNPTAQAECTAEEAYTL 436

Query: 1510 TEGRGIFASGSPFKSVTLEDGRTFIPGQGNNAYVFPGVALGV 1635
            TEGR +FASGSPF  V L DGR F PGQGNN Y+FPG  + +
Sbjct: 437  TEGRCLFASGSPFGPVKLTDGRVFTPGQGNNVYIFPGYRIPI 478


  Database: RefSeq49_HP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 18,297,164
  Number of sequences in database:  32,964
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 32964
Number of Hits to DB: 80,794,653
Number of extensions: 2325191
Number of successful extensions: 10520
Number of sequences better than 1.0e-05: 6
Number of HSP's gapped: 10391
Number of HSP's successfully gapped: 6
Length of query: 680
Length of database: 18,297,164
Length adjustment: 109
Effective length of query: 571
Effective length of database: 14,704,088
Effective search space: 8396034248
Effective search space used: 8396034248
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Animal-Genome cDNA HTMT1_0093_E12

Animal-Genome cDNA HTMT1_0093_E12


Search to RefSeqCP_Rel49

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= HTMT1_0093_E12
         (2042 letters)

Database: RefSeq49_CP.fasta 
           33,336 sequences; 18,874,504 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|XP_848770.1| PREDICTED: similar to malic enzyme 3, NADP(+)-d...  1096   0.0  
Alignment   gi|XP_542269.2| PREDICTED: similar to malic enzyme 3, NADP(+)-d...  1009   0.0  
Alignment   gi|XP_857227.1| PREDICTED: similar to malic enzyme 3, NADP(+)-d...  1006   0.0  
Alignment   gi|XP_857135.1| PREDICTED: similar to malic enzyme 3, NADP(+)-d...  1003   0.0  
Alignment   gi|XP_857177.1| PREDICTED: similar to malic enzyme 3, NADP(+)-d...   959   0.0  
Alignment   gi|XP_532217.2| PREDICTED: similar to NADP-dependent malic enzy...   790   0.0  
Alignment   gi|XP_857051.1| PREDICTED: similar to malic enzyme 3, NADP(+)-d...   662   0.0  
Alignment   gi|XP_849530.1| PREDICTED: similar to NAD-dependent malic enzym...   637   0.0  
Alignment   gi|XP_533402.2| PREDICTED: similar to NAD-dependent malic enzym...   575   e-164
Alignment   gi|XP_857091.1| PREDICTED: similar to NADP-dependent malic enzy...   406   e-113

>ref|XP_848770.1| PREDICTED: similar to malic enzyme 3, NADP(+)-dependent,
            mitochondrial isoform 2 [Canis familiaris].
          Length = 604

 Score = 1096 bits (2835), Expect = 0.0
 Identities = 548/604 (90%), Positives = 558/604 (92%)
 Frame = +1

Query: 136  MGASLGSGARVALLPRQACGAVXXXXXXXXXXGCHSKTGLPRPVPLKKRGYDVTRNPHLN 315
            MGA+LG GAR  LL  +A GAV          GC S+ G  RPVPLKKRGYDVTRNPHLN
Sbjct: 1    MGAALGRGARPGLLRGKAWGAVPRWTPSAPGRGCRSRAGPARPVPLKKRGYDVTRNPHLN 60

Query: 316  KGMAFTLEERLQLGIHGLIPPCFLSQDVQLLRIMRYYERQQSDLDKYIILMTLQDRNEKL 495
            KGMAFTLEERLQLGIHGLIPPCFLSQDVQLLRIMRYYERQQSDLDKYIILMTLQDRNEKL
Sbjct: 61   KGMAFTLEERLQLGIHGLIPPCFLSQDVQLLRIMRYYERQQSDLDKYIILMTLQDRNEKL 120

Query: 496  FYRVLTSDVEKFMPIVYTPTVGLACQHYGLTFRRPRGLFITIHDKGHLPTMLNSWPEDDI 675
            FYRVLTSDVEKFMPIVYTPTVGLACQ YGLTFRRPRGLFITIHDKGHL TMLNSWPEDDI
Sbjct: 121  FYRVLTSDVEKFMPIVYTPTVGLACQQYGLTFRRPRGLFITIHDKGHLATMLNSWPEDDI 180

Query: 676  KAVVVTDGERILGLGDLGCYGMGIPVGKLALYTACGGVNPRQCLPVLLDVGTNNEELLRD 855
            KAVVVTDGERILGLGDLGCYGMGIPVGKLALYTACGGV+P+QCLPVLLDVGTNNEELLRD
Sbjct: 181  KAVVVTDGERILGLGDLGCYGMGIPVGKLALYTACGGVSPQQCLPVLLDVGTNNEELLRD 240

Query: 856  PLYIGLKHRRVRGQDYDDLLDEFMQAVTDKFGINCLIQFEDFANANAFRLLNKYRNKYCM 1035
            PLYIGLKH+RVRG++YDDLLDEFMQAVTDKFGINCLIQFEDFANANAFRLLNKYRNKYCM
Sbjct: 241  PLYIGLKHQRVRGKEYDDLLDEFMQAVTDKFGINCLIQFEDFANANAFRLLNKYRNKYCM 300

Query: 1036 FNDDIQGTASVAVAGILAALRITKNKLSNHVFVFQGAGEAAMGIAHLLVMALEKEGVPKA 1215
            FNDDIQGTASVAVAGILAALRITKNKLSNHVFVFQGAGEAAMGIAHLLVMALEKEGVPKA
Sbjct: 301  FNDDIQGTASVAVAGILAALRITKNKLSNHVFVFQGAGEAAMGIAHLLVMALEKEGVPKA 360

Query: 1216 EATRKIWMVDSRGLIVKGRSHLNHEKEMFAQDHPXXXXXXXXXXXXKPTXXXXXXXXXXX 1395
            EATRKIWMVDS+GLIVKGRSHLNHEKEMFAQDHP            KPT           
Sbjct: 361  EATRKIWMVDSKGLIVKGRSHLNHEKEMFAQDHPEVKSLEEVVRLVKPTAIIGVAAIAGA 420

Query: 1396 FTEQILRDMASFHERPIIFALSNPTSKAECTAEKCYRVTEGRGIFASGSPFKSVTLEDGR 1575
            FTEQILRDMASFHERPIIFALSNPTSKAECTAEKCYRVTEGRGIFASGSPFKSVTLEDGR
Sbjct: 421  FTEQILRDMASFHERPIIFALSNPTSKAECTAEKCYRVTEGRGIFASGSPFKSVTLEDGR 480

Query: 1576 TFIPGQGNNAYVFPGVALGVIAGGIRHIPDEIFLLTAEQIAQEVSEQHLSQGRLYPPLST 1755
            TFIPGQGNNAYVFPGVALGVIAGGIRHIPDEIFLLTAEQIAQEVSEQHLSQGRLYPPLST
Sbjct: 481  TFIPGQGNNAYVFPGVALGVIAGGIRHIPDEIFLLTAEQIAQEVSEQHLSQGRLYPPLST 540

Query: 1756 IRDVSLRIAIKVLDYAYKHNLASYYPEPKDKEAFVRSLVYTPDYDSFTLDSYTWPKEAMN 1935
            IRDVSLRIAIKVLD+AYKHNLASYYPEPKDKEAFVRSLVYTPDYDSFTLDSYTWPKEAMN
Sbjct: 541  IRDVSLRIAIKVLDFAYKHNLASYYPEPKDKEAFVRSLVYTPDYDSFTLDSYTWPKEAMN 600

Query: 1936 VQNV 1947
            VQ V
Sbjct: 601  VQTV 604


>ref|XP_542269.2| PREDICTED: similar to malic enzyme 3, NADP(+)-dependent,
            mitochondrial isoform 1 [Canis familiaris].
          Length = 569

 Score = 1009 bits (2608), Expect = 0.0
 Identities = 509/569 (89%), Positives = 516/569 (90%), Gaps = 27/569 (4%)
 Frame = +1

Query: 322  MAFTLEERLQLGIHGLIPPCFLSQDVQLLRIMRYYERQQSDLDKYIILMTLQDRNEKLFY 501
            MAFTLEERLQLGIHGLIPPCFLSQDVQLLRIMRYYERQQSDLDKYIILMTLQDRNEKLFY
Sbjct: 1    MAFTLEERLQLGIHGLIPPCFLSQDVQLLRIMRYYERQQSDLDKYIILMTLQDRNEKLFY 60

Query: 502  RVLTSDVEKFMPIVYTPTVGLACQHYGLTFRRPR-------------------------- 603
            RVLTSDVEKFMPIVYTPTVGLACQ YGLTFRRPR                          
Sbjct: 61   RVLTSDVEKFMPIVYTPTVGLACQQYGLTFRRPRSAKEGLRGESHYGVDSLSSEGLSCSA 120

Query: 604  -GLFITIHDKGHLPTMLNSWPEDDIKAVVVTDGERILGLGDLGCYGMGIPVGKLALYTAC 780
             GLFITIHDKGHL TMLNSWPEDDIKAVVVTDGERILGLGDLGCYGMGIPVGKLALYTAC
Sbjct: 121  RGLFITIHDKGHLATMLNSWPEDDIKAVVVTDGERILGLGDLGCYGMGIPVGKLALYTAC 180

Query: 781  GGVNPRQCLPVLLDVGTNNEELLRDPLYIGLKHRRVRGQDYDDLLDEFMQAVTDKFGINC 960
            GGV+P+QCLPVLLDVGTNNEELLRDPLYIGLKH+RVRG++YDDLLDEFMQAVTDKFGINC
Sbjct: 181  GGVSPQQCLPVLLDVGTNNEELLRDPLYIGLKHQRVRGKEYDDLLDEFMQAVTDKFGINC 240

Query: 961  LIQFEDFANANAFRLLNKYRNKYCMFNDDIQGTASVAVAGILAALRITKNKLSNHVFVFQ 1140
            LIQFEDFANANAFRLLNKYRNKYCMFNDDIQGTASVAVAGILAALRITKNKLSNHVFVFQ
Sbjct: 241  LIQFEDFANANAFRLLNKYRNKYCMFNDDIQGTASVAVAGILAALRITKNKLSNHVFVFQ 300

Query: 1141 GAGEAAMGIAHLLVMALEKEGVPKAEATRKIWMVDSRGLIVKGRSHLNHEKEMFAQDHPX 1320
            GAGEAAMGIAHLLVMALEKEGVPKAEATRKIWMVDS+GLIVKGRSHLNHEKEMFAQDHP 
Sbjct: 301  GAGEAAMGIAHLLVMALEKEGVPKAEATRKIWMVDSKGLIVKGRSHLNHEKEMFAQDHPE 360

Query: 1321 XXXXXXXXXXXKPTXXXXXXXXXXXFTEQILRDMASFHERPIIFALSNPTSKAECTAEKC 1500
                       KPT           FTEQILRDMASFHERPIIFALSNPTSKAECTAEKC
Sbjct: 361  VKSLEEVVRLVKPTAIIGVAAIAGAFTEQILRDMASFHERPIIFALSNPTSKAECTAEKC 420

Query: 1501 YRVTEGRGIFASGSPFKSVTLEDGRTFIPGQGNNAYVFPGVALGVIAGGIRHIPDEIFLL 1680
            YRVTEGRGIFASGSPFKSVTLEDGRTFIPGQGNNAYVFPGVALGVIAGGIRHIPDEIFLL
Sbjct: 421  YRVTEGRGIFASGSPFKSVTLEDGRTFIPGQGNNAYVFPGVALGVIAGGIRHIPDEIFLL 480

Query: 1681 TAEQIAQEVSEQHLSQGRLYPPLSTIRDVSLRIAIKVLDYAYKHNLASYYPEPKDKEAFV 1860
            TAEQIAQEVSEQHLSQGRLYPPLSTIRDVSLRIAIKVLD+AYKHNLASYYPEPKDKEAFV
Sbjct: 481  TAEQIAQEVSEQHLSQGRLYPPLSTIRDVSLRIAIKVLDFAYKHNLASYYPEPKDKEAFV 540

Query: 1861 RSLVYTPDYDSFTLDSYTWPKEAMNVQNV 1947
            RSLVYTPDYDSFTLDSYTWPKEAMNVQ V
Sbjct: 541  RSLVYTPDYDSFTLDSYTWPKEAMNVQTV 569


>ref|XP_857227.1| PREDICTED: similar to malic enzyme 3, NADP(+)-dependent,
            mitochondrial isoform 7 [Canis familiaris].
          Length = 562

 Score = 1006 bits (2600), Expect = 0.0
 Identities = 506/562 (90%), Positives = 514/562 (91%), Gaps = 20/562 (3%)
 Frame = +1

Query: 322  MAFTLEERLQLGIHGLIPPCFLSQDVQLLRIMRYYERQQSDLDKYIILMTLQDRNEKLFY 501
            MAFTLEERLQLGIHGLIPPCFLSQDVQLLRIMRYYERQQSDLDKYIILMTLQDRNEKLFY
Sbjct: 1    MAFTLEERLQLGIHGLIPPCFLSQDVQLLRIMRYYERQQSDLDKYIILMTLQDRNEKLFY 60

Query: 502  RVLTSDVEKFMPIVYTPTVGLACQHYGLTFRRPRGLFITIHDKGHLPTMLNSWPEDDIKA 681
            RVLTSDVEKFMPIVYTPTVGLACQ YGLTFRRPRGLFITIHDKGHL TMLNSWPEDDIKA
Sbjct: 61   RVLTSDVEKFMPIVYTPTVGLACQQYGLTFRRPRGLFITIHDKGHLATMLNSWPEDDIKA 120

Query: 682  VVVTDGERILGLGDLGCYGMGIPVGKLALYTACGGVNPRQCLPVLLDVGTNNEELLRDPL 861
            VVVTDGERILGLGDLGCYGMGIPVGKLALYTACGGV+P+QCLPVLLDVGTNNEELLRDPL
Sbjct: 121  VVVTDGERILGLGDLGCYGMGIPVGKLALYTACGGVSPQQCLPVLLDVGTNNEELLRDPL 180

Query: 862  YIGLKHRRVRGQDYDDLLDEFMQAVTDKFGINCLIQFEDFANANAFRLLNKYRNKYCMFN 1041
            YIGLKH+RVRG++YDDLLDEFMQAVTDKFGINCLIQFEDFANANAFRLLNKYRNKYCMFN
Sbjct: 181  YIGLKHQRVRGKEYDDLLDEFMQAVTDKFGINCLIQFEDFANANAFRLLNKYRNKYCMFN 240

Query: 1042 DDIQGTASVAVAGILAALRITKNKLSNHVFVFQGAGEAAMGIAHLLVMALEKEGVPKAEA 1221
            DDIQGTASVAVAGILAALRITKNKLSNHVFVFQGAGEAAMGIAHLLVMALEKEGVPKAEA
Sbjct: 241  DDIQGTASVAVAGILAALRITKNKLSNHVFVFQGAGEAAMGIAHLLVMALEKEGVPKAEA 300

Query: 1222 TRKIWMVDSRGLIVK--------------------GRSHLNHEKEMFAQDHPXXXXXXXX 1341
            TRKIWMVDS+GLIVK                     + HLNHEKEMFAQDHP        
Sbjct: 301  TRKIWMVDSKGLIVKVLSSSYQCLACNECVIMPADPKDHLNHEKEMFAQDHPEVKSLEEV 360

Query: 1342 XXXXKPTXXXXXXXXXXXFTEQILRDMASFHERPIIFALSNPTSKAECTAEKCYRVTEGR 1521
                KPT           FTEQILRDMASFHERPIIFALSNPTSKAECTAEKCYRVTEGR
Sbjct: 361  VRLVKPTAIIGVAAIAGAFTEQILRDMASFHERPIIFALSNPTSKAECTAEKCYRVTEGR 420

Query: 1522 GIFASGSPFKSVTLEDGRTFIPGQGNNAYVFPGVALGVIAGGIRHIPDEIFLLTAEQIAQ 1701
            GIFASGSPFKSVTLEDGRTFIPGQGNNAYVFPGVALGVIAGGIRHIPDEIFLLTAEQIAQ
Sbjct: 421  GIFASGSPFKSVTLEDGRTFIPGQGNNAYVFPGVALGVIAGGIRHIPDEIFLLTAEQIAQ 480

Query: 1702 EVSEQHLSQGRLYPPLSTIRDVSLRIAIKVLDYAYKHNLASYYPEPKDKEAFVRSLVYTP 1881
            EVSEQHLSQGRLYPPLSTIRDVSLRIAIKVLD+AYKHNLASYYPEPKDKEAFVRSLVYTP
Sbjct: 481  EVSEQHLSQGRLYPPLSTIRDVSLRIAIKVLDFAYKHNLASYYPEPKDKEAFVRSLVYTP 540

Query: 1882 DYDSFTLDSYTWPKEAMNVQNV 1947
            DYDSFTLDSYTWPKEAMNVQ V
Sbjct: 541  DYDSFTLDSYTWPKEAMNVQTV 562


>ref|XP_857135.1| PREDICTED: similar to malic enzyme 3, NADP(+)-dependent,
            mitochondrial isoform 5 [Canis familiaris].
          Length = 573

 Score = 1003 bits (2593), Expect = 0.0
 Identities = 509/573 (88%), Positives = 516/573 (90%), Gaps = 31/573 (5%)
 Frame = +1

Query: 322  MAFTLEERLQLGIHGLIPPCFLSQDVQLLRIMRYYERQQSDLDKYIILMTLQDRNEKLFY 501
            MAFTLEERLQLGIHGLIPPCFLSQDVQLLRIMRYYERQQSDLDKYIILMTLQDRNEKLFY
Sbjct: 1    MAFTLEERLQLGIHGLIPPCFLSQDVQLLRIMRYYERQQSDLDKYIILMTLQDRNEKLFY 60

Query: 502  RVLTSDVEKFMPIVYTPTVGLACQHYGLTFRRPRGLFITIHDKGHLPTMLNSWPEDDIKA 681
            RVLTSDVEKFMPIVYTPTVGLACQ YGLTFRRPRGLFITIHDKGHL TMLNSWPEDDIKA
Sbjct: 61   RVLTSDVEKFMPIVYTPTVGLACQQYGLTFRRPRGLFITIHDKGHLATMLNSWPEDDIKA 120

Query: 682  VVVTDGERILGLGDLGCYGMGIPVGKLALYTACGGVNPRQCLPVLLDVGTNNEELLRDPL 861
            VVVTDGERILGLGDLGCYGMGIPVGKLALYTACGGV+P+QCLPVLLDVGTNNEELLRDPL
Sbjct: 121  VVVTDGERILGLGDLGCYGMGIPVGKLALYTACGGVSPQQCLPVLLDVGTNNEELLRDPL 180

Query: 862  YIGLKHRRVRGQDYDDLLDEFMQAVTDKFGINCLIQFEDFANANAFRLLNKYRNKYCMFN 1041
            YIGLKH+RVRG++YDDLLDEFMQAVTDKFGINCLIQFEDFANANAFRLLNKYRNKYCMFN
Sbjct: 181  YIGLKHQRVRGKEYDDLLDEFMQAVTDKFGINCLIQFEDFANANAFRLLNKYRNKYCMFN 240

Query: 1042 DDIQGTASVAVAGILAALRITKNKLSNHVFVFQGAGEAAMGIAHLLVMALEKEGVPKAEA 1221
            DDIQGTASVAVAGILAALRITKNKLSNHVFVFQGAGEAAMGIAHLLVMALEKEGVPKAEA
Sbjct: 241  DDIQGTASVAVAGILAALRITKNKLSNHVFVFQGAGEAAMGIAHLLVMALEKEGVPKAEA 300

Query: 1222 TRKIWMVDSRGLIVK---GRSHLNHEKEMFAQDHPXXXXXXXXXXXXKPTXXXXXXXXXX 1392
            TRKIWMVDS+GLIVK   GRSHLNHEKEMFAQDHP            KPT          
Sbjct: 301  TRKIWMVDSKGLIVKVLSGRSHLNHEKEMFAQDHPEVKSLEEVVRLVKPTAIIGVAAIAG 360

Query: 1393 XFTEQILRDMASFHERPIIFALSNPTSKAECTAEKCYRVTE------------------- 1515
             FTEQILRDMASFHERPIIFALSNPTSKAECTAEKCYRVTE                   
Sbjct: 361  AFTEQILRDMASFHERPIIFALSNPTSKAECTAEKCYRVTEVSGESFLPQAERTYPSSYH 420

Query: 1516 ---------GRGIFASGSPFKSVTLEDGRTFIPGQGNNAYVFPGVALGVIAGGIRHIPDE 1668
                     GRGIFASGSPFKSVTLEDGRTFIPGQGNNAYVFPGVALGVIAGGIRHIPDE
Sbjct: 421  HVILFRVPLGRGIFASGSPFKSVTLEDGRTFIPGQGNNAYVFPGVALGVIAGGIRHIPDE 480

Query: 1669 IFLLTAEQIAQEVSEQHLSQGRLYPPLSTIRDVSLRIAIKVLDYAYKHNLASYYPEPKDK 1848
            IFLLTAEQIAQEVSEQHLSQGRLYPPLSTIRDVSLRIAIKVLD+AYKHNLASYYPEPKDK
Sbjct: 481  IFLLTAEQIAQEVSEQHLSQGRLYPPLSTIRDVSLRIAIKVLDFAYKHNLASYYPEPKDK 540

Query: 1849 EAFVRSLVYTPDYDSFTLDSYTWPKEAMNVQNV 1947
            EAFVRSLVYTPDYDSFTLDSYTWPKEAMNVQ V
Sbjct: 541  EAFVRSLVYTPDYDSFTLDSYTWPKEAMNVQTV 573


>ref|XP_857177.1| PREDICTED: similar to malic enzyme 3, NADP(+)-dependent,
            mitochondrial isoform 6 [Canis familiaris].
          Length = 513

 Score =  959 bits (2478), Expect = 0.0
 Identities = 482/542 (88%), Positives = 491/542 (90%)
 Frame = +1

Query: 322  MAFTLEERLQLGIHGLIPPCFLSQDVQLLRIMRYYERQQSDLDKYIILMTLQDRNEKLFY 501
            MAFTLEERLQLGIHGLIPPCFLSQDVQLLRIMRYYERQQSDLDKYIILMTLQDRNEKLFY
Sbjct: 1    MAFTLEERLQLGIHGLIPPCFLSQDVQLLRIMRYYERQQSDLDKYIILMTLQDRNEKLFY 60

Query: 502  RVLTSDVEKFMPIVYTPTVGLACQHYGLTFRRPRGLFITIHDKGHLPTMLNSWPEDDIKA 681
            RVLTSDVEKFMPIVYTPTVGLACQ YGLTFRRPRGLFITIHDKGHL TMLNSWPEDDIKA
Sbjct: 61   RVLTSDVEKFMPIVYTPTVGLACQQYGLTFRRPRGLFITIHDKGHLATMLNSWPEDDIKA 120

Query: 682  VVVTDGERILGLGDLGCYGMGIPVGKLALYTACGGVNPRQCLPVLLDVGTNNEELLRDPL 861
            VVVTDGERILGLGDLGCYGMGIPVGKLALYTACGGV+P+QCLPVLLDVGTNNEELLRDPL
Sbjct: 121  VVVTDGERILGLGDLGCYGMGIPVGKLALYTACGGVSPQQCLPVLLDVGTNNEELLRDPL 180

Query: 862  YIGLKHRRVRGQDYDDLLDEFMQAVTDKFGINCLIQFEDFANANAFRLLNKYRNKYCMFN 1041
            YIGLKH+RVRG++YDDLLDEFMQAVTDKFGINCLIQFEDFANANAFRLLNKYRNKYCMFN
Sbjct: 181  YIGLKHQRVRGKEYDDLLDEFMQAVTDKFGINCLIQFEDFANANAFRLLNKYRNKYCMFN 240

Query: 1042 DDIQGTASVAVAGILAALRITKNKLSNHVFVFQGAGEAAMGIAHLLVMALEKEGVPKAEA 1221
            DDIQGTASVAVAGILAALRITKNKLSNHVFVFQGAGEAAMGIAHLLVMALEKEGVPKAEA
Sbjct: 241  DDIQGTASVAVAGILAALRITKNKLSNHVFVFQGAGEAAMGIAHLLVMALEKEGVPKAEA 300

Query: 1222 TRKIWMVDSRGLIVKGRSHLNHEKEMFAQDHPXXXXXXXXXXXXKPTXXXXXXXXXXXFT 1401
            TRKIWMVDS+GLIVKGRSHLNHEKEMFAQDHP            KPT             
Sbjct: 301  TRKIWMVDSKGLIVKGRSHLNHEKEMFAQDHPEVKSLEEVVRLVKPTA------------ 348

Query: 1402 EQILRDMASFHERPIIFALSNPTSKAECTAEKCYRVTEGRGIFASGSPFKSVTLEDGRTF 1581
                              +     +AECTAEKCYRVTEGRGIFASGSPFKSVTLEDGRTF
Sbjct: 349  -----------------IIGRRRQEAECTAEKCYRVTEGRGIFASGSPFKSVTLEDGRTF 391

Query: 1582 IPGQGNNAYVFPGVALGVIAGGIRHIPDEIFLLTAEQIAQEVSEQHLSQGRLYPPLSTIR 1761
            IPGQGNNAYVFPGVALGVIAGGIRHIPDEIFLLTAEQIAQEVSEQHLSQGRLYPPLSTIR
Sbjct: 392  IPGQGNNAYVFPGVALGVIAGGIRHIPDEIFLLTAEQIAQEVSEQHLSQGRLYPPLSTIR 451

Query: 1762 DVSLRIAIKVLDYAYKHNLASYYPEPKDKEAFVRSLVYTPDYDSFTLDSYTWPKEAMNVQ 1941
            DVSLRIAIKVLD+AYKHNLASYYPEPKDKEAFVRSLVYTPDYDSFTLDSYTWPKEAMNVQ
Sbjct: 452  DVSLRIAIKVLDFAYKHNLASYYPEPKDKEAFVRSLVYTPDYDSFTLDSYTWPKEAMNVQ 511

Query: 1942 NV 1947
             V
Sbjct: 512  TV 513


>ref|XP_532217.2| PREDICTED: similar to NADP-dependent malic enzyme (NADP-ME) (Malic
            enzyme 1) [Canis familiaris].
          Length = 634

 Score =  790 bits (2041), Expect = 0.0
 Identities = 379/540 (70%), Positives = 450/540 (83%)
 Frame = +1

Query: 322  MAFTLEERLQLGIHGLIPPCFLSQDVQLLRIMRYYERQQSDLDKYIILMTLQDRNEKLFY 501
            +AFTLEER QL IHGL+PPCF+SQD+Q+LRI++ +ER  SD D+Y++LM LQDRNEKLFY
Sbjct: 90   LAFTLEERQQLNIHGLLPPCFISQDIQVLRIIKNFERLTSDFDRYLLLMDLQDRNEKLFY 149

Query: 502  RVLTSDVEKFMPIVYTPTVGLACQHYGLTFRRPRGLFITIHDKGHLPTMLNSWPEDDIKA 681
             VL SD+EKFMPIVYTPTVGLACQ Y L FR+PRGLFI+IHD+GH+ ++LN+WPED IKA
Sbjct: 150  SVLMSDLEKFMPIVYTPTVGLACQQYSLAFRKPRGLFISIHDRGHIASVLNAWPEDVIKA 209

Query: 682  VVVTDGERILGLGDLGCYGMGIPVGKLALYTACGGVNPRQCLPVLLDVGTNNEELLRDPL 861
            +VVTDGERILGLGDLGC GMGIPVGKLALYTACGG+NP++CLPV+LDVGT NE LL+DPL
Sbjct: 210  IVVTDGERILGLGDLGCNGMGIPVGKLALYTACGGMNPQECLPVILDVGTENEALLKDPL 269

Query: 862  YIGLKHRRVRGQDYDDLLDEFMQAVTDKFGINCLIQFEDFANANAFRLLNKYRNKYCMFN 1041
            YIGL+ RRVRG +YDD LDEFM+AV+ K+G+NCLIQFEDFAN NAFRLL KY+N+YC FN
Sbjct: 270  YIGLRQRRVRGPEYDDFLDEFMEAVSSKYGMNCLIQFEDFANINAFRLLKKYQNRYCTFN 329

Query: 1042 DDIQGTASVAVAGILAALRITKNKLSNHVFVFQGAGEAAMGIAHLLVMALEKEGVPKAEA 1221
            DDIQGTASVAVAGILAALRITKNKLS+   +FQGAGEAA+GIAHL+VMA+EKEG+PK +A
Sbjct: 330  DDIQGTASVAVAGILAALRITKNKLSDQKILFQGAGEAALGIAHLIVMAMEKEGLPKEKA 389

Query: 1222 TRKIWMVDSRGLIVKGRSHLNHEKEMFAQDHPXXXXXXXXXXXXKPTXXXXXXXXXXXFT 1401
             + IW+VDS+GLIVKGR+ L  EKE FA +H             KPT           F+
Sbjct: 390  MKNIWLVDSKGLIVKGRAALTQEKEQFAHEHEEMKNLEAIVQEIKPTALIGVAAIGGAFS 449

Query: 1402 EQILRDMASFHERPIIFALSNPTSKAECTAEKCYRVTEGRGIFASGSPFKSVTLEDGRTF 1581
            EQIL+DMA+F+ERPIIFALSNPTSKAECTAE+CY++T+GR IFASGSPF  VTL +GRT 
Sbjct: 450  EQILKDMAAFNERPIIFALSNPTSKAECTAEQCYKLTKGRAIFASGSPFDPVTLPNGRTL 509

Query: 1582 IPGQGNNAYVFPGVALGVIAGGIRHIPDEIFLLTAEQIAQEVSEQHLSQGRLYPPLSTIR 1761
             PGQGNN+YVFPGVALGV+A G+RHI D IFL TAE IAQ+VS++HL +GRLYPPL TIR
Sbjct: 510  YPGQGNNSYVFPGVALGVVACGLRHITDNIFLTTAEIIAQQVSDKHLEEGRLYPPLDTIR 569

Query: 1762 DVSLRIAIKVLDYAYKHNLASYYPEPKDKEAFVRSLVYTPDYDSFTLDSYTWPKEAMNVQ 1941
            DVSL+IA K++  AY+   A+ YPEP +KEAFVRS +Y  DYD    D Y+WP+EA  +Q
Sbjct: 570  DVSLKIAAKIVKDAYQEKTATVYPEPPNKEAFVRSQMYDTDYDQILPDCYSWPEEAQKIQ 629


>ref|XP_857051.1| PREDICTED: similar to malic enzyme 3, NADP(+)-dependent,
            mitochondrial isoform 3 [Canis familiaris].
          Length = 361

 Score =  662 bits (1709), Expect = 0.0
 Identities = 327/347 (94%), Positives = 333/347 (95%)
 Frame = +1

Query: 322  MAFTLEERLQLGIHGLIPPCFLSQDVQLLRIMRYYERQQSDLDKYIILMTLQDRNEKLFY 501
            MAFTLEERLQLGIHGLIPPCFLSQDVQLLRIMRYYERQQSDLDKYIILMTLQDRNEKLFY
Sbjct: 1    MAFTLEERLQLGIHGLIPPCFLSQDVQLLRIMRYYERQQSDLDKYIILMTLQDRNEKLFY 60

Query: 502  RVLTSDVEKFMPIVYTPTVGLACQHYGLTFRRPRGLFITIHDKGHLPTMLNSWPEDDIKA 681
            RVLTSDVEKFMPIVYTPTVGLACQ YGLTFRRPRGLFITIHDKGHL TMLNSWPEDDIKA
Sbjct: 61   RVLTSDVEKFMPIVYTPTVGLACQQYGLTFRRPRGLFITIHDKGHLATMLNSWPEDDIKA 120

Query: 682  VVVTDGERILGLGDLGCYGMGIPVGKLALYTACGGVNPRQCLPVLLDVGTNNEELLRDPL 861
            VVVTDGERILGLGDLGCYGMGIPVGKLALYTACGGV+P+QCLPVLLDVGTNNEELLRDPL
Sbjct: 121  VVVTDGERILGLGDLGCYGMGIPVGKLALYTACGGVSPQQCLPVLLDVGTNNEELLRDPL 180

Query: 862  YIGLKHRRVRGQDYDDLLDEFMQAVTDKFGINCLIQFEDFANANAFRLLNKYRNKYCMFN 1041
            YIGLKH+RVRG++YDDLLDEFMQAVTDKFGINCLIQFEDFANANAFRLLNKYRNKYCMFN
Sbjct: 181  YIGLKHQRVRGKEYDDLLDEFMQAVTDKFGINCLIQFEDFANANAFRLLNKYRNKYCMFN 240

Query: 1042 DDIQGTASVAVAGILAALRITKNKLSNHVFVFQGAGEAAMGIAHLLVMALEKEGVPKAEA 1221
            DDIQGTASVAVAGILAALRITKNKLSNHVFVFQGAGEAAMGIAHLLVMALEKEGVPKAEA
Sbjct: 241  DDIQGTASVAVAGILAALRITKNKLSNHVFVFQGAGEAAMGIAHLLVMALEKEGVPKAEA 300

Query: 1222 TRKIWMVDSRGLIVKGRSHLNHEKEMFAQDHPXXXXXXXXXXXXKPT 1362
            TRKIWMVDS+GLIVKGRSHLNHEKEMFAQDHP            KPT
Sbjct: 301  TRKIWMVDSKGLIVKGRSHLNHEKEMFAQDHPEVKSLEEVVRLVKPT 347


>ref|XP_849530.1| PREDICTED: similar to NAD-dependent malic enzyme, mitochondrial
            precursor (NAD-ME) (Malic enzyme 2) isoform 2 [Canis
            familiaris].
          Length = 584

 Score =  637 bits (1642), Expect = 0.0
 Identities = 306/562 (54%), Positives = 406/562 (72%), Gaps = 3/562 (0%)
 Frame = +1

Query: 259  RPVPLKKRGYDVTRNPHLNKGMAFTLEERLQLGIHGLIPPCFLSQDVQLLRIMRYYERQQ 438
            R + +K++G  +  NP  NKGMAFTL+ER  LG+ GL+PP   +QD+Q LR  +  ++  
Sbjct: 17   RHIHIKEKGKPLMLNPRTNKGMAFTLQERQMLGLQGLLPPKIETQDIQALRFHKNVKKMN 76

Query: 439  SDLDKYIILMTLQDRNEKLFYRVLTSDVEKFMPIVYTPTVGLACQHYGLTFRRPRGLFIT 618
              L+KYI +M +Q+RNEKLFYR+L  D+E  MPIVYTPTVGLAC  YG  FRRP+GLFI+
Sbjct: 77   GPLEKYIYIMGIQERNEKLFYRILQDDIESLMPIVYTPTVGLACSQYGHIFRRPKGLFIS 136

Query: 619  IHDKGHLPTMLNSWPEDDIKAVVVTDGERILGLGDLGCYGMGIPVGKLALYTACGGVNPR 798
            I D+GH+ +++++WPE+ +KAVVVTDGERILGLGDLG YGMGIPVGKL LYTAC G+ P 
Sbjct: 137  ISDRGHVRSIVDNWPENHVKAVVVTDGERILGLGDLGVYGMGIPVGKLCLYTACAGIRPD 196

Query: 799  QCLPVLLDVGTNNEELLRDPLYIGLKHRRVRGQDYDDLLDEFMQAVTDKFGINCLIQFED 978
            +CLPV +DVGT+N  LL+DP Y+GL  +R R Q YDDL+DEFM+A+TD++G N LIQFED
Sbjct: 197  RCLPVCIDVGTDNPALLKDPFYMGLYQKRDRSQRYDDLIDEFMKAITDRYGQNTLIQFED 256

Query: 979  FANANAFRLLNKYRNKYCMFNDDIQGTASVAVAGILAALRITKNKLSNHVFVFQGAGEAA 1158
            F N NAFR L KYR KYC FNDDIQGTA+VA+AG+LAA ++     S H  +F GAGEAA
Sbjct: 257  FGNHNAFRFLRKYREKYCTFNDDIQGTAAVALAGLLAAQKVIGKSFSEHKILFLGAGEAA 316

Query: 1159 MGIAHLLVMALEKEGVPKAEATRKIWMVDSRGLIVKGR-SHLNHEKEMFAQDHP--XXXX 1329
            +GIA+L+VMA+ + G+ + EA +KIWMVD  GL+ KGR + + + +E FA   P      
Sbjct: 317  LGIANLIVMAMVENGLSEEEAQKKIWMVDKFGLLFKGRKAKIENHQEPFAHSAPGIIPDT 376

Query: 1330 XXXXXXXXKPTXXXXXXXXXXXFTEQILRDMASFHERPIIFALSNPTSKAECTAEKCYRV 1509
                    +P+           FT  +++ MA  +ERP+IFALSNPT+ AECTAE+ Y +
Sbjct: 377  FEDAVNILRPSAIIGVAGAGRLFTPGVIKAMADINERPVIFALSNPTAMAECTAEEAYTL 436

Query: 1510 TEGRGIFASGSPFKSVTLEDGRTFIPGQGNNAYVFPGVALGVIAGGIRHIPDEIFLLTAE 1689
            TEGR +FASGSPF+ V L DG+ F PGQGNN Y+FPGVAL VI    RHI D +FL  A+
Sbjct: 437  TEGRCLFASGSPFEPVKLSDGQLFTPGQGNNVYIFPGVALAVILCNTRHISDHVFLEAAK 496

Query: 1690 QIAQEVSEQHLSQGRLYPPLSTIRDVSLRIAIKVLDYAYKHNLASYYPEPKDKEAFVRSL 1869
             +A +++++ L+QGRLYPPL+ I++VS+ IAIKV +Y Y + +A  YPEP+DK  ++R  
Sbjct: 497  ALANQLTDKELAQGRLYPPLADIQEVSINIAIKVTEYLYANKMAFRYPEPEDKAKYIRER 556

Query: 1870 VYTPDYDSFTLDSYTWPKEAMN 1935
            ++  +YDS   D Y WP+ A++
Sbjct: 557  IWRSEYDSLLPDVYDWPESALS 578


>ref|XP_533402.2| PREDICTED: similar to NAD-dependent malic enzyme, mitochondrial
            precursor (NAD-ME) (Malic enzyme 2) isoform 1 [Canis
            familiaris].
          Length = 499

 Score =  575 bits (1482), Expect = e-164
 Identities = 276/493 (55%), Positives = 361/493 (73%), Gaps = 3/493 (0%)
 Frame = +1

Query: 466  MTLQDRNEKLFYRVLTSDVEKFMPIVYTPTVGLACQHYGLTFRRPRGLFITIHDKGHLPT 645
            M +Q+RNEKLFYR+L  D+E  MPIVYTPTVGLAC  YG  FRRP+GLFI+I D+GH+ +
Sbjct: 1    MGIQERNEKLFYRILQDDIESLMPIVYTPTVGLACSQYGHIFRRPKGLFISISDRGHVRS 60

Query: 646  MLNSWPEDDIKAVVVTDGERILGLGDLGCYGMGIPVGKLALYTACGGVNPRQCLPVLLDV 825
            ++++WPE+ +KAVVVTDGERILGLGDLG YGMGIPVGKL LYTAC G+ P +CLPV +DV
Sbjct: 61   IVDNWPENHVKAVVVTDGERILGLGDLGVYGMGIPVGKLCLYTACAGIRPDRCLPVCIDV 120

Query: 826  GTNNEELLRDPLYIGLKHRRVRGQDYDDLLDEFMQAVTDKFGINCLIQFEDFANANAFRL 1005
            GT+N  LL+DP Y+GL  +R R Q YDDL+DEFM+A+TD++G N LIQFEDF N NAFR 
Sbjct: 121  GTDNPALLKDPFYMGLYQKRDRSQRYDDLIDEFMKAITDRYGQNTLIQFEDFGNHNAFRF 180

Query: 1006 LNKYRNKYCMFNDDIQGTASVAVAGILAALRITKNKLSNHVFVFQGAGEAAMGIAHLLVM 1185
            L KYR KYC FNDDIQGTA+VA+AG+LAA ++     S H  +F GAGEAA+GIA+L+VM
Sbjct: 181  LRKYREKYCTFNDDIQGTAAVALAGLLAAQKVIGKSFSEHKILFLGAGEAALGIANLIVM 240

Query: 1186 ALEKEGVPKAEATRKIWMVDSRGLIVKGR-SHLNHEKEMFAQDHP--XXXXXXXXXXXXK 1356
            A+ + G+ + EA +KIWMVD  GL+ KGR + + + +E FA   P              +
Sbjct: 241  AMVENGLSEEEAQKKIWMVDKFGLLFKGRKAKIENHQEPFAHSAPGIIPDTFEDAVNILR 300

Query: 1357 PTXXXXXXXXXXXFTEQILRDMASFHERPIIFALSNPTSKAECTAEKCYRVTEGRGIFAS 1536
            P+           FT  +++ MA  +ERP+IFALSNPT+ AECTAE+ Y +TEGR +FAS
Sbjct: 301  PSAIIGVAGAGRLFTPGVIKAMADINERPVIFALSNPTAMAECTAEEAYTLTEGRCLFAS 360

Query: 1537 GSPFKSVTLEDGRTFIPGQGNNAYVFPGVALGVIAGGIRHIPDEIFLLTAEQIAQEVSEQ 1716
            GSPF+ V L DG+ F PGQGNN Y+FPGVAL VI    RHI D +FL  A+ +A +++++
Sbjct: 361  GSPFEPVKLSDGQLFTPGQGNNVYIFPGVALAVILCNTRHISDHVFLEAAKALANQLTDK 420

Query: 1717 HLSQGRLYPPLSTIRDVSLRIAIKVLDYAYKHNLASYYPEPKDKEAFVRSLVYTPDYDSF 1896
             L+QGRLYPPL+ I++VS+ IAIKV +Y Y + +A  YPEP+DK  ++R  ++  +YDS 
Sbjct: 421  ELAQGRLYPPLADIQEVSINIAIKVTEYLYANKMAFRYPEPEDKAKYIRERIWRSEYDSL 480

Query: 1897 TLDSYTWPKEAMN 1935
              D Y WP+ A++
Sbjct: 481  LPDVYDWPESALS 493


>ref|XP_857091.1| PREDICTED: similar to NADP-dependent malic enzyme, mitochondrial
            precursor (NADP-ME) (Malic enzyme 3) isoform 4 [Canis
            familiaris].
          Length = 231

 Score =  406 bits (1044), Expect = e-113
 Identities = 203/228 (89%), Positives = 204/228 (89%)
 Frame = +1

Query: 1264 KGRSHLNHEKEMFAQDHPXXXXXXXXXXXXKPTXXXXXXXXXXXFTEQILRDMASFHERP 1443
            KGRSHLNHEKEMFAQDHP            KPT           FTEQILRDMASFHERP
Sbjct: 4    KGRSHLNHEKEMFAQDHPEVKSLEEVVRLVKPTAIIGVAAIAGAFTEQILRDMASFHERP 63

Query: 1444 IIFALSNPTSKAECTAEKCYRVTEGRGIFASGSPFKSVTLEDGRTFIPGQGNNAYVFPGV 1623
            IIFALSNPTSKAECTAEKCYRVTEGRGIFASGSPFKSVTLEDGRTFIPGQGNNAYVFPGV
Sbjct: 64   IIFALSNPTSKAECTAEKCYRVTEGRGIFASGSPFKSVTLEDGRTFIPGQGNNAYVFPGV 123

Query: 1624 ALGVIAGGIRHIPDEIFLLTAEQIAQEVSEQHLSQGRLYPPLSTIRDVSLRIAIKVLDYA 1803
            ALGVIAGGIRHIPDEIFLLTAEQIAQEVSEQHLSQGRLYPPLSTIRDVSLRIAIKVLD+A
Sbjct: 124  ALGVIAGGIRHIPDEIFLLTAEQIAQEVSEQHLSQGRLYPPLSTIRDVSLRIAIKVLDFA 183

Query: 1804 YKHNLASYYPEPKDKEAFVRSLVYTPDYDSFTLDSYTWPKEAMNVQNV 1947
            YKHNLASYYPEPKDKEAFVRSLVYTPDYDSFTLDSYTWPKEAMNVQ V
Sbjct: 184  YKHNLASYYPEPKDKEAFVRSLVYTPDYDSFTLDSYTWPKEAMNVQTV 231


  Database: RefSeq49_CP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 18,874,504
  Number of sequences in database:  33,336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33336
Number of Hits to DB: 82,459,490
Number of extensions: 2382764
Number of successful extensions: 10982
Number of sequences better than 1.0e-05: 10
Number of HSP's gapped: 10872
Number of HSP's successfully gapped: 11
Length of query: 680
Length of database: 18,874,504
Length adjustment: 110
Effective length of query: 570
Effective length of database: 15,207,544
Effective search space: 8668300080
Effective search space used: 8668300080
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)

Search to RefSeqMP_Rel49

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= HTMT1_0093_E12
         (2042 letters)

Database: RefSeq49_MP.fasta 
           30,036 sequences; 15,617,559 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_852072.2| NADP-dependent malic enzyme, mitochondrial prec...  1092   0.0  
Alignment   gi|NP_032641.2| NADP-dependent malic enzyme isoform 1 [Mus musc...   813   0.0  
Alignment   gi|NP_001185862.1| NADP-dependent malic enzyme isoform 2 [Mus m...   790   0.0  
Alignment   gi|NP_663469.1| NAD-dependent malic enzyme, mitochondrial precu...   629   e-180
Alignment   gi|XP_003086141.1| PREDICTED: NAD-dependent malic enzyme, mitoc...   583   e-166

>ref|NP_852072.2| NADP-dependent malic enzyme, mitochondrial precursor [Mus musculus].
          Length = 604

 Score = 1092 bits (2824), Expect = 0.0
 Identities = 535/604 (88%), Positives = 560/604 (92%)
 Frame = +1

Query: 136  MGASLGSGARVALLPRQACGAVXXXXXXXXXXGCHSKTGLPRPVPLKKRGYDVTRNPHLN 315
            MGA+LG+GAR+  +PR AC ++          GCHSK+G PRPVPLKKRGYDVTRNPHLN
Sbjct: 1    MGAALGTGARLTSVPRIACSSLRRQAPSAPAQGCHSKSGPPRPVPLKKRGYDVTRNPHLN 60

Query: 316  KGMAFTLEERLQLGIHGLIPPCFLSQDVQLLRIMRYYERQQSDLDKYIILMTLQDRNEKL 495
            KGMAFTLEERLQLGIHGLIPPCFLSQDVQLLRIMRYYE QQSDLDKYIILMTLQDRNEKL
Sbjct: 61   KGMAFTLEERLQLGIHGLIPPCFLSQDVQLLRIMRYYENQQSDLDKYIILMTLQDRNEKL 120

Query: 496  FYRVLTSDVEKFMPIVYTPTVGLACQHYGLTFRRPRGLFITIHDKGHLPTMLNSWPEDDI 675
            FYRVLTSDVEKFMPIVYTPTVGLACQHYGLTFRRPRGLFITIHDKGH+ TMLNSWPED+I
Sbjct: 121  FYRVLTSDVEKFMPIVYTPTVGLACQHYGLTFRRPRGLFITIHDKGHIATMLNSWPEDNI 180

Query: 676  KAVVVTDGERILGLGDLGCYGMGIPVGKLALYTACGGVNPRQCLPVLLDVGTNNEELLRD 855
            KAVVVTDGERILGLGDLGCYGMGIPVGKLALYTACGGVNP+QCLPVLLDVGTNNEELLRD
Sbjct: 181  KAVVVTDGERILGLGDLGCYGMGIPVGKLALYTACGGVNPQQCLPVLLDVGTNNEELLRD 240

Query: 856  PLYIGLKHRRVRGQDYDDLLDEFMQAVTDKFGINCLIQFEDFANANAFRLLNKYRNKYCM 1035
            PLYIGLKH+RVRG++YDDLLDEFMQAVTDKFGINCLIQFEDFANANAFRLLNKYRNKYCM
Sbjct: 241  PLYIGLKHQRVRGEEYDDLLDEFMQAVTDKFGINCLIQFEDFANANAFRLLNKYRNKYCM 300

Query: 1036 FNDDIQGTASVAVAGILAALRITKNKLSNHVFVFQGAGEAAMGIAHLLVMALEKEGVPKA 1215
            FNDDIQGTASVAVAGILAALRITKN+LSNHVFVFQGAGEAAMGIAHLLVMALEKEG+PK 
Sbjct: 301  FNDDIQGTASVAVAGILAALRITKNRLSNHVFVFQGAGEAAMGIAHLLVMALEKEGIPKT 360

Query: 1216 EATRKIWMVDSRGLIVKGRSHLNHEKEMFAQDHPXXXXXXXXXXXXKPTXXXXXXXXXXX 1395
            EA +KIWMVDS+GLIVKGRSHLNHEKEMFAQDHP            KPT           
Sbjct: 361  EAIKKIWMVDSKGLIVKGRSHLNHEKEMFAQDHPEVNSLEEVVRLVKPTAIIGVAAIAGA 420

Query: 1396 FTEQILRDMASFHERPIIFALSNPTSKAECTAEKCYRVTEGRGIFASGSPFKSVTLEDGR 1575
            FTEQILRDMASFHERPI+FALSNPTSKAECTAEKCYRVTEGRGIFASGSPFKSVTLEDGR
Sbjct: 421  FTEQILRDMASFHERPIVFALSNPTSKAECTAEKCYRVTEGRGIFASGSPFKSVTLEDGR 480

Query: 1576 TFIPGQGNNAYVFPGVALGVIAGGIRHIPDEIFLLTAEQIAQEVSEQHLSQGRLYPPLST 1755
            TF PGQGNNAYVFPGVALGVIAGGIRHIPDEIFLLTAEQIAQEVSEQHLSQGRLYPPLST
Sbjct: 481  TFTPGQGNNAYVFPGVALGVIAGGIRHIPDEIFLLTAEQIAQEVSEQHLSQGRLYPPLST 540

Query: 1756 IRDVSLRIAIKVLDYAYKHNLASYYPEPKDKEAFVRSLVYTPDYDSFTLDSYTWPKEAMN 1935
            IRDVSLRIA+KVLDYAYKHNLASYYPEPKDKEAFV+SL+YTPDYDSF+LD+Y+WPKEAM+
Sbjct: 541  IRDVSLRIAVKVLDYAYKHNLASYYPEPKDKEAFVKSLIYTPDYDSFSLDTYSWPKEAMS 600

Query: 1936 VQNV 1947
            VQ V
Sbjct: 601  VQKV 604


>ref|NP_032641.2| NADP-dependent malic enzyme isoform 1 [Mus musculus].
          Length = 572

 Score =  813 bits (2100), Expect = 0.0
 Identities = 389/562 (69%), Positives = 464/562 (82%)
 Frame = +1

Query: 256  PRPVPLKKRGYDVTRNPHLNKGMAFTLEERLQLGIHGLIPPCFLSQDVQLLRIMRYYERQ 435
            PR     +RGY +TR+PHLNK +AFTLEER QL IHGL+PPC +SQ++Q+LRI++ +ER 
Sbjct: 6    PRRRHTHQRGYLLTRDPHLNKDLAFTLEERQQLNIHGLLPPCIISQELQVLRIIKNFERL 65

Query: 436  QSDLDKYIILMTLQDRNEKLFYRVLTSDVEKFMPIVYTPTVGLACQHYGLTFRRPRGLFI 615
             SD D+Y++LM LQDRNEKLFY VL SDVEKFMPIVYTPTVGLACQ Y L FR+PRGLFI
Sbjct: 66   NSDFDRYLLLMDLQDRNEKLFYSVLMSDVEKFMPIVYTPTVGLACQQYSLAFRKPRGLFI 125

Query: 616  TIHDKGHLPTMLNSWPEDDIKAVVVTDGERILGLGDLGCYGMGIPVGKLALYTACGGVNP 795
            +IHDKGH+ ++LN+WPED +KA+VVTDGERILGLGDLGC GMGIPVGKLALYTACGGVNP
Sbjct: 126  SIHDKGHIASVLNAWPEDVVKAIVVTDGERILGLGDLGCNGMGIPVGKLALYTACGGVNP 185

Query: 796  RQCLPVLLDVGTNNEELLRDPLYIGLKHRRVRGQDYDDLLDEFMQAVTDKFGINCLIQFE 975
            +QCLP+ LDVGT NEELL+DPLYIGL+HRRVRG +YD  LDEFM+A + K+G+NCLIQFE
Sbjct: 186  QQCLPITLDVGTENEELLKDPLYIGLRHRRVRGPEYDAFLDEFMEAASSKYGMNCLIQFE 245

Query: 976  DFANANAFRLLNKYRNKYCMFNDDIQGTASVAVAGILAALRITKNKLSNHVFVFQGAGEA 1155
            DFAN NAFRLLNKYRNKYC FNDDIQGTASVAVAG+LAALRITKNKLS+   +FQGAGEA
Sbjct: 246  DFANRNAFRLLNKYRNKYCTFNDDIQGTASVAVAGLLAALRITKNKLSDQTVLFQGAGEA 305

Query: 1156 AMGIAHLLVMALEKEGVPKAEATRKIWMVDSRGLIVKGRSHLNHEKEMFAQDHPXXXXXX 1335
            A+GIAHL+VMA+EKEG+ K  A +KIW+VDS+GLIVKGR+ L  EKE+FA +H       
Sbjct: 306  ALGIAHLVVMAMEKEGLSKENARKKIWLVDSKGLIVKGRASLTEEKEVFAHEHEEMKNLE 365

Query: 1336 XXXXXXKPTXXXXXXXXXXXFTEQILRDMASFHERPIIFALSNPTSKAECTAEKCYRVTE 1515
                  KPT           FTEQIL+DMA+F+ERPIIFALSNPTSKAEC+AE+CY+VT+
Sbjct: 366  AIVQKIKPTALIGVAAIGGAFTEQILKDMAAFNERPIIFALSNPTSKAECSAEQCYKVTK 425

Query: 1516 GRGIFASGSPFKSVTLEDGRTFIPGQGNNAYVFPGVALGVIAGGIRHIPDEIFLLTAEQI 1695
            GR IFASGSPF  VTL DGRT  PGQGNN+YVFPGVALGV+A G+RHI D++FL TAE I
Sbjct: 426  GRAIFASGSPFDPVTLPDGRTLFPGQGNNSYVFPGVALGVVACGLRHIDDKVFLTTAEVI 485

Query: 1696 AQEVSEQHLSQGRLYPPLSTIRDVSLRIAIKVLDYAYKHNLASYYPEPKDKEAFVRSLVY 1875
            +Q+VS++HL +GRLYPPL+TIR VSL+IA+K++  AYK  +A+ YPEP++KE FV S +Y
Sbjct: 486  SQQVSDKHLQEGRLYPPLNTIRGVSLKIAVKIVQDAYKEKMATVYPEPQNKEEFVSSQMY 545

Query: 1876 TPDYDSFTLDSYTWPKEAMNVQ 1941
            + +YD    D Y WP E   +Q
Sbjct: 546  STNYDQILPDCYPWPAEVQKIQ 567


>ref|NP_001185862.1| NADP-dependent malic enzyme isoform 2 [Mus musculus].
          Length = 552

 Score =  790 bits (2041), Expect = 0.0
 Identities = 377/540 (69%), Positives = 449/540 (83%)
 Frame = +1

Query: 322  MAFTLEERLQLGIHGLIPPCFLSQDVQLLRIMRYYERQQSDLDKYIILMTLQDRNEKLFY 501
            +AFTLEER QL IHGL+PPC +SQ++Q+LRI++ +ER  SD D+Y++LM LQDRNEKLFY
Sbjct: 8    LAFTLEERQQLNIHGLLPPCIISQELQVLRIIKNFERLNSDFDRYLLLMDLQDRNEKLFY 67

Query: 502  RVLTSDVEKFMPIVYTPTVGLACQHYGLTFRRPRGLFITIHDKGHLPTMLNSWPEDDIKA 681
             VL SDVEKFMPIVYTPTVGLACQ Y L FR+PRGLFI+IHDKGH+ ++LN+WPED +KA
Sbjct: 68   SVLMSDVEKFMPIVYTPTVGLACQQYSLAFRKPRGLFISIHDKGHIASVLNAWPEDVVKA 127

Query: 682  VVVTDGERILGLGDLGCYGMGIPVGKLALYTACGGVNPRQCLPVLLDVGTNNEELLRDPL 861
            +VVTDGERILGLGDLGC GMGIPVGKLALYTACGGVNP+QCLP+ LDVGT NEELL+DPL
Sbjct: 128  IVVTDGERILGLGDLGCNGMGIPVGKLALYTACGGVNPQQCLPITLDVGTENEELLKDPL 187

Query: 862  YIGLKHRRVRGQDYDDLLDEFMQAVTDKFGINCLIQFEDFANANAFRLLNKYRNKYCMFN 1041
            YIGL+HRRVRG +YD  LDEFM+A + K+G+NCLIQFEDFAN NAFRLLNKYRNKYC FN
Sbjct: 188  YIGLRHRRVRGPEYDAFLDEFMEAASSKYGMNCLIQFEDFANRNAFRLLNKYRNKYCTFN 247

Query: 1042 DDIQGTASVAVAGILAALRITKNKLSNHVFVFQGAGEAAMGIAHLLVMALEKEGVPKAEA 1221
            DDIQGTASVAVAG+LAALRITKNKLS+   +FQGAGEAA+GIAHL+VMA+EKEG+ K  A
Sbjct: 248  DDIQGTASVAVAGLLAALRITKNKLSDQTVLFQGAGEAALGIAHLVVMAMEKEGLSKENA 307

Query: 1222 TRKIWMVDSRGLIVKGRSHLNHEKEMFAQDHPXXXXXXXXXXXXKPTXXXXXXXXXXXFT 1401
             +KIW+VDS+GLIVKGR+ L  EKE+FA +H             KPT           FT
Sbjct: 308  RKKIWLVDSKGLIVKGRASLTEEKEVFAHEHEEMKNLEAIVQKIKPTALIGVAAIGGAFT 367

Query: 1402 EQILRDMASFHERPIIFALSNPTSKAECTAEKCYRVTEGRGIFASGSPFKSVTLEDGRTF 1581
            EQIL+DMA+F+ERPIIFALSNPTSKAEC+AE+CY+VT+GR IFASGSPF  VTL DGRT 
Sbjct: 368  EQILKDMAAFNERPIIFALSNPTSKAECSAEQCYKVTKGRAIFASGSPFDPVTLPDGRTL 427

Query: 1582 IPGQGNNAYVFPGVALGVIAGGIRHIPDEIFLLTAEQIAQEVSEQHLSQGRLYPPLSTIR 1761
             PGQGNN+YVFPGVALGV+A G+RHI D++FL TAE I+Q+VS++HL +GRLYPPL+TIR
Sbjct: 428  FPGQGNNSYVFPGVALGVVACGLRHIDDKVFLTTAEVISQQVSDKHLQEGRLYPPLNTIR 487

Query: 1762 DVSLRIAIKVLDYAYKHNLASYYPEPKDKEAFVRSLVYTPDYDSFTLDSYTWPKEAMNVQ 1941
             VSL+IA+K++  AYK  +A+ YPEP++KE FV S +Y+ +YD    D Y WP E   +Q
Sbjct: 488  GVSLKIAVKIVQDAYKEKMATVYPEPQNKEEFVSSQMYSTNYDQILPDCYPWPAEVQKIQ 547


>ref|NP_663469.1| NAD-dependent malic enzyme, mitochondrial precursor [Mus musculus].
          Length = 589

 Score =  629 bits (1622), Expect = e-180
 Identities = 308/561 (54%), Positives = 401/561 (71%), Gaps = 3/561 (0%)
 Frame = +1

Query: 259  RPVPLKKRGYDVTRNPHLNKGMAFTLEERLQLGIHGLIPPCFLSQDVQLLRIMRYYERQQ 438
            R V LK++G  +  NP  NKGMAFTL+ER  LG+ GL+PP   +QD+Q LR  R  ++  
Sbjct: 17   RRVHLKEKGKPLMLNPRTNKGMAFTLQERQMLGLQGLLPPKIETQDIQALRFHRNLKKMT 76

Query: 439  SDLDKYIILMTLQDRNEKLFYRVLTSDVEKFMPIVYTPTVGLACQHYGLTFRRPRGLFIT 618
            S L+KYI +M +Q+RNEKLFYR+L  D+E  MPIVYTPTVGLAC  YG  FRRP+GLFI+
Sbjct: 77   SPLEKYIYIMGIQERNEKLFYRILQDDIESLMPIVYTPTVGLACCQYGHIFRRPKGLFIS 136

Query: 619  IHDKGHLPTMLNSWPEDDIKAVVVTDGERILGLGDLGCYGMGIPVGKLALYTACGGVNPR 798
            I D+GH+ +++++WPE+ +KAVVVTDGERILGLGDLG YGMGIPVGKL LYTAC G+ P 
Sbjct: 137  ISDRGHVRSIVDNWPENHVKAVVVTDGERILGLGDLGVYGMGIPVGKLCLYTACAGIQPE 196

Query: 799  QCLPVLLDVGTNNEELLRDPLYIGLKHRRVRGQDYDDLLDEFMQAVTDKFGINCLIQFED 978
            +CLPV +DVGT+N  LL+DP Y+GL  +R R Q YDDL+DEFM+A+TD++G N LIQFED
Sbjct: 197  KCLPVCIDVGTDNMALLKDPFYMGLYQKRDRSQLYDDLMDEFMKAITDRYGRNTLIQFED 256

Query: 979  FANANAFRLLNKYRNKYCMFNDDIQGTASVAVAGILAALRITKNKLSNHVFVFQGAGEAA 1158
            F N NAFR L KY+ KYC FNDDIQGTA+VA++G+LAA R+    +S H  +F GAGEAA
Sbjct: 257  FGNHNAFRFLRKYQQKYCTFNDDIQGTAAVALSGLLAAQRVINKPVSEHKILFLGAGEAA 316

Query: 1159 MGIAHLLVMALEKEGVPKAEATRKIWMVDSRGLIVKGRS---HLNHEKEMFAQDHPXXXX 1329
            +GIA+L+V+++ + G+ + EA RKIWM D  GL+VKGR+     N E    A        
Sbjct: 317  LGIANLIVLSMVESGLSEEEAQRKIWMFDKSGLLVKGRTASIDSNQEPYAHAAPESIPAT 376

Query: 1330 XXXXXXXXKPTXXXXXXXXXXXFTEQILRDMASFHERPIIFALSNPTSKAECTAEKCYRV 1509
                    KP+           FT  +++ MAS +ERPIIFALSNPT++AECTAE  Y +
Sbjct: 377  FEDAVNKLKPSVIIGVAGAGPLFTHGVIKAMASINERPIIFALSNPTAQAECTAEDAYTL 436

Query: 1510 TEGRGIFASGSPFKSVTLEDGRTFIPGQGNNAYVFPGVALGVIAGGIRHIPDEIFLLTAE 1689
            TEGR +FASGSPF+ V L+DGR F PGQGNNAY+FPGVAL VI    RHI D +FL  A+
Sbjct: 437  TEGRCLFASGSPFEPVKLQDGRVFTPGQGNNAYIFPGVALAVILCEARHISDTVFLEAAK 496

Query: 1690 QIAQEVSEQHLSQGRLYPPLSTIRDVSLRIAIKVLDYAYKHNLASYYPEPKDKEAFVRSL 1869
             +  ++++  L+QGRLYP L+ I++VS  IAIK+ +Y Y + +A  YPEP+DK  +VR  
Sbjct: 497  ALTTQLTDAELAQGRLYPSLANIQEVSANIAIKLAEYLYANKMAFRYPEPEDKARYVRER 556

Query: 1870 VYTPDYDSFTLDSYTWPKEAM 1932
            ++  +Y S   D Y WP+ ++
Sbjct: 557  IWRSNYVSLLPDVYDWPESSL 577


>ref|XP_003086141.1| PREDICTED: NAD-dependent malic enzyme, mitochondrial-like [Mus
            musculus].
          Length = 563

 Score =  583 bits (1502), Expect = e-166
 Identities = 293/561 (52%), Positives = 380/561 (67%), Gaps = 3/561 (0%)
 Frame = +1

Query: 259  RPVPLKKRGYDVTRNPHLNKGMAFTLEERLQLGIHGLIPPCFLSQDVQLLRIMRYYERQQ 438
            R V LK++G  +  NP  NKGMAFTL+ER  LG+ GL+PP   +QD+Q LR  R  ++  
Sbjct: 17   RRVHLKEKGKPLMLNPRTNKGMAFTLQERQMLGLQGLLPPKIETQDIQALRFHRNLKKMT 76

Query: 439  SDLDKYIILMTLQDRNEKLFYRVLTSDVEKFMPIVYTPTVGLACQHYGLTFRRPRGLFIT 618
            S L+KYI +M +Q+RNEKLFYR+L  D+E  MPIVYTPTVGLAC  YG  FRRP+GLFI+
Sbjct: 77   SPLEKYIYIMGIQERNEKLFYRILQDDIESLMPIVYTPTVGLACCQYGHIFRRPKGLFIS 136

Query: 619  IHDKGHLPTMLNSWPEDDIKAVVVTDGERILGLGDLGCYGMGIPVGKLALYTACGGVNPR 798
            I D+GH+ +++++WPE+ +KAVVVTDGERILGLGDLG YGMGIPVGKL LYTAC G+ P 
Sbjct: 137  ISDRGHVRSIVDNWPENHVKAVVVTDGERILGLGDLGVYGMGIPVGKLCLYTACAGIQPE 196

Query: 799  QCLPVLLDVGTNNEELLRDPLYIGLKHRRVRGQDYDDLLDEFMQAVTDKFGINCLIQFED 978
            +CLPV +DVGT+N  LL+DP YI                          +G N LIQFED
Sbjct: 197  KCLPVCIDVGTDNMALLKDPFYI--------------------------YGRNTLIQFED 230

Query: 979  FANANAFRLLNKYRNKYCMFNDDIQGTASVAVAGILAALRITKNKLSNHVFVFQGAGEAA 1158
            F N NAFR L KY+ KYC FNDDIQGTA+VA++G+LAA R+    +S H  +F GAGEAA
Sbjct: 231  FGNHNAFRFLRKYQQKYCTFNDDIQGTAAVALSGLLAAQRVINKPVSEHKILFLGAGEAA 290

Query: 1159 MGIAHLLVMALEKEGVPKAEATRKIWMVDSRGLIVKGRS---HLNHEKEMFAQDHPXXXX 1329
            +GIA+L+V+++ + G+ + EA RKIWM D  GL+VKGR+     N E    A        
Sbjct: 291  LGIANLIVLSMVESGLSEEEAQRKIWMFDKSGLLVKGRTASIDSNQEPYAHAAPESIPAT 350

Query: 1330 XXXXXXXXKPTXXXXXXXXXXXFTEQILRDMASFHERPIIFALSNPTSKAECTAEKCYRV 1509
                    KP+           FT  +++ MAS +ERPIIFALSNPT++AECTAE  Y +
Sbjct: 351  FEDAVNKLKPSVIIGVAGAGPLFTHGVIKAMASINERPIIFALSNPTAQAECTAEDAYTL 410

Query: 1510 TEGRGIFASGSPFKSVTLEDGRTFIPGQGNNAYVFPGVALGVIAGGIRHIPDEIFLLTAE 1689
            TEGR +FASGSPF+ V L+DGR F PGQGNNAY+FPGVAL VI    RHI D +FL  A+
Sbjct: 411  TEGRCLFASGSPFEPVKLQDGRVFTPGQGNNAYIFPGVALAVILCEARHISDTVFLEAAK 470

Query: 1690 QIAQEVSEQHLSQGRLYPPLSTIRDVSLRIAIKVLDYAYKHNLASYYPEPKDKEAFVRSL 1869
             +  ++++  L+QGRLYP L+ I++VS  IAIK+ +Y Y + +A  YPEP+DK  +VR  
Sbjct: 471  ALTTQLTDAELAQGRLYPSLANIQEVSANIAIKLAEYLYANKMAFRYPEPEDKARYVRER 530

Query: 1870 VYTPDYDSFTLDSYTWPKEAM 1932
            ++  +Y S   D Y WP+ ++
Sbjct: 531  IWRSNYVSLLPDVYDWPESSL 551


  Database: RefSeq49_MP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 15,617,559
  Number of sequences in database:  30,036
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 30036
Number of Hits to DB: 68,227,007
Number of extensions: 1931675
Number of successful extensions: 8026
Number of sequences better than 1.0e-05: 5
Number of HSP's gapped: 7939
Number of HSP's successfully gapped: 5
Length of query: 680
Length of database: 15,617,559
Length adjustment: 108
Effective length of query: 572
Effective length of database: 12,373,671
Effective search space: 7077739812
Effective search space used: 7077739812
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)

Search to RefSeqSP_Rel49

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= HTMT1_0093_E12
         (2042 letters)

Database: RefSeq49_SP.fasta 
           24,897 sequences; 11,343,932 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|XP_003129776.2| PREDICTED: LOW QUALITY PROTEIN: NADP-depende...  1130   0.0  
Alignment   gi|XP_001924368.2| PREDICTED: NADP-dependent malic enzyme [Sus ...   823   0.0  
Alignment   gi|XP_003121491.2| PREDICTED: NAD-dependent malic enzyme, mitoc...   523   e-148

>ref|XP_003129776.2| PREDICTED: LOW QUALITY PROTEIN: NADP-dependent malic enzyme,
            mitochondrial [Sus scrofa].
          Length = 613

 Score = 1130 bits (2924), Expect = 0.0
 Identities = 567/613 (92%), Positives = 568/613 (92%), Gaps = 9/613 (1%)
 Frame = +1

Query: 136  MGASLGSGARVALLPRQACGAVXXXXXXXXXXGCHSKTGLPRPVPLKKRGYDVTRNPHLN 315
            MGASLGSGARVALLPRQACGAV          GCHSKTGLPRPVPLKKRGYDVTRNPHLN
Sbjct: 1    MGASLGSGARVALLPRQACGAVRRWAPPAPARGCHSKTGLPRPVPLKKRGYDVTRNPHLN 60

Query: 316  KGMAFTLEERLQLGIHGLIPPCFLSQDVQLLRIMRYYERQQSDLDKYIILMTLQDRNEKL 495
            KGMAFTLEERLQLGIHGLIPPCFLSQDVQLLRIMRYYERQQSDLDKYIILMTLQDRNEKL
Sbjct: 61   KGMAFTLEERLQLGIHGLIPPCFLSQDVQLLRIMRYYERQQSDLDKYIILMTLQDRNEKL 120

Query: 496  FYRVLTSDVEKFMPIVYTPTVGLACQHYGLTFRRPRGLFITIHDKGHLPTMLNSWPEDDI 675
            FYRVLTSDVEKFMPIVYTPTVGLACQHYGLTFRRPRGLFITIHDKGHLPTMLNSWPEDDI
Sbjct: 121  FYRVLTSDVEKFMPIVYTPTVGLACQHYGLTFRRPRGLFITIHDKGHLPTMLNSWPEDDI 180

Query: 676  KAVVVTDGERILGLGDLGCYGMGIPVGKLALYTACGGVNPRQCLPVLLDVGTNNEELLRD 855
            KAVVVTDGERILGLGDLGCYGMGIPVGKLALYTACGGVNPRQCLPVLLDVGTNNEELLRD
Sbjct: 181  KAVVVTDGERILGLGDLGCYGMGIPVGKLALYTACGGVNPRQCLPVLLDVGTNNEELLRD 240

Query: 856  PLYIGLKHRRVRGQDYDDLLDEFMQAVTDKFGINCLIQFEDFANANAFRLLNKYRNKYCM 1035
            PLYIGLKHRRVRGQDYDDLLDEFMQAVTDKFGINCLIQFEDFANANAFRLLNKYRNKYCM
Sbjct: 241  PLYIGLKHRRVRGQDYDDLLDEFMQAVTDKFGINCLIQFEDFANANAFRLLNKYRNKYCM 300

Query: 1036 FNDDI---------QGTASVAVAGILAALRITKNKLSNHVFVFQGAGEAAMGIAHLLVMA 1188
            FNDDI         QGTASV  AGI AALRITK+KLSNHVFVFQGAGEAAMGIAHLLVMA
Sbjct: 301  FNDDIQGXCQSTVLQGTASVDAAGIQAALRITKDKLSNHVFVFQGAGEAAMGIAHLLVMA 360

Query: 1189 LEKEGVPKAEATRKIWMVDSRGLIVKGRSHLNHEKEMFAQDHPXXXXXXXXXXXXKPTXX 1368
            LEKEGVPKAEATRKIWMVDSRGLIVKGRSHLNHEKEMFAQDHP            KPT  
Sbjct: 361  LEKEGVPKAEATRKIWMVDSRGLIVKGRSHLNHEKEMFAQDHPEVSSLEEVVRLVKPTAI 420

Query: 1369 XXXXXXXXXFTEQILRDMASFHERPIIFALSNPTSKAECTAEKCYRVTEGRGIFASGSPF 1548
                     FTEQILRDMASFHERPIIFALSNPTSKAECTAEKCYRVTEGRGIFASGSPF
Sbjct: 421  IGVAAIAGAFTEQILRDMASFHERPIIFALSNPTSKAECTAEKCYRVTEGRGIFASGSPF 480

Query: 1549 KSVTLEDGRTFIPGQGNNAYVFPGVALGVIAGGIRHIPDEIFLLTAEQIAQEVSEQHLSQ 1728
            KSVTLEDGRTFIPGQGNNAYVFPGVALGVIAGGIRHIPDEIFLLTAEQIAQEVSEQHLSQ
Sbjct: 481  KSVTLEDGRTFIPGQGNNAYVFPGVALGVIAGGIRHIPDEIFLLTAEQIAQEVSEQHLSQ 540

Query: 1729 GRLYPPLSTIRDVSLRIAIKVLDYAYKHNLASYYPEPKDKEAFVRSLVYTPDYDSFTLDS 1908
            GRLYPPLSTIRDVSLRIAIKVLDYAYKHNLASYYPEPKDKEAFVRSLVYTPDYDSFTLDS
Sbjct: 541  GRLYPPLSTIRDVSLRIAIKVLDYAYKHNLASYYPEPKDKEAFVRSLVYTPDYDSFTLDS 600

Query: 1909 YTWPKEAMNVQNV 1947
            YTWPKEAMNVQNV
Sbjct: 601  YTWPKEAMNVQNV 613


>ref|XP_001924368.2| PREDICTED: NADP-dependent malic enzyme [Sus scrofa].
          Length = 571

 Score =  823 bits (2126), Expect = 0.0
 Identities = 396/562 (70%), Positives = 469/562 (83%)
 Frame = +1

Query: 256  PRPVPLKKRGYDVTRNPHLNKGMAFTLEERLQLGIHGLIPPCFLSQDVQLLRIMRYYERQ 435
            PR     +RGY VTR PHLNK +AFTLEER QL IHGL+PPCF+SQD+Q+LR+++ +ER 
Sbjct: 6    PRRRHTLQRGYAVTRIPHLNKDLAFTLEERQQLNIHGLLPPCFISQDIQVLRVIKNFERL 65

Query: 436  QSDLDKYIILMTLQDRNEKLFYRVLTSDVEKFMPIVYTPTVGLACQHYGLTFRRPRGLFI 615
             SD D+Y++LM LQDRNEKLFY+VL SD+EKFMPIVYTPTVGLACQ Y L FR+PRGLFI
Sbjct: 66   NSDFDRYLLLMDLQDRNEKLFYKVLMSDIEKFMPIVYTPTVGLACQQYSLAFRKPRGLFI 125

Query: 616  TIHDKGHLPTMLNSWPEDDIKAVVVTDGERILGLGDLGCYGMGIPVGKLALYTACGGVNP 795
            +IHD+GH+ ++LN+WPED IKAVVVTDGERILGLGDLGC GMGIPVGKLALYTACGGVNP
Sbjct: 126  SIHDRGHVASVLNAWPEDVIKAVVVTDGERILGLGDLGCNGMGIPVGKLALYTACGGVNP 185

Query: 796  RQCLPVLLDVGTNNEELLRDPLYIGLKHRRVRGQDYDDLLDEFMQAVTDKFGINCLIQFE 975
            ++CLPV+LDVGT NEELL+DPLYIGL+ RRVRG +YDD LDEFM+AV+ K+G+NCLIQFE
Sbjct: 186  QECLPVILDVGTENEELLKDPLYIGLRQRRVRGPEYDDFLDEFMEAVSSKYGMNCLIQFE 245

Query: 976  DFANANAFRLLNKYRNKYCMFNDDIQGTASVAVAGILAALRITKNKLSNHVFVFQGAGEA 1155
            DFAN NAFRLL KY+N+YC FNDDIQGTASVAVAGILAALRITKNKLS+   +FQGAGEA
Sbjct: 246  DFANINAFRLLKKYQNQYCTFNDDIQGTASVAVAGILAALRITKNKLSDQTILFQGAGEA 305

Query: 1156 AMGIAHLLVMALEKEGVPKAEATRKIWMVDSRGLIVKGRSHLNHEKEMFAQDHPXXXXXX 1335
            A+GIAHL+VMA+EKEGVPK +A +KIW+VDS+GLIVKGR+ L HEKE FA +H       
Sbjct: 306  ALGIAHLIVMAMEKEGVPKEKAIKKIWLVDSKGLIVKGRAALTHEKEEFAHEHEEMKNLE 365

Query: 1336 XXXXXXKPTXXXXXXXXXXXFTEQILRDMASFHERPIIFALSNPTSKAECTAEKCYRVTE 1515
                  KPT           F+EQIL+DMA+F+ERPIIFALSNPTSKAECTAE+CY +T+
Sbjct: 366  AIVQDIKPTALIGVAAIGGAFSEQILKDMAAFNERPIIFALSNPTSKAECTAEQCYTLTQ 425

Query: 1516 GRGIFASGSPFKSVTLEDGRTFIPGQGNNAYVFPGVALGVIAGGIRHIPDEIFLLTAEQI 1695
            GR IFASGSPF  VTL  G+T  PGQGNN+YVFPGVALGV+A G+RHI D+IFL TAE I
Sbjct: 426  GRAIFASGSPFDPVTLPSGQTLYPGQGNNSYVFPGVALGVVACGLRHITDKIFLTTAEVI 485

Query: 1696 AQEVSEQHLSQGRLYPPLSTIRDVSLRIAIKVLDYAYKHNLASYYPEPKDKEAFVRSLVY 1875
            AQ+VS++HL +GRLYPPL+TIRDVSL+IA K++  AY+   A+ YPEP +KEAFVRS +Y
Sbjct: 486  AQQVSDKHLEEGRLYPPLNTIRDVSLKIAEKIVRDAYQEKTATIYPEPSNKEAFVRSQMY 545

Query: 1876 TPDYDSFTLDSYTWPKEAMNVQ 1941
            + DYD    D Y+WP+EA  +Q
Sbjct: 546  STDYDQILPDGYSWPEEAQKIQ 567


>ref|XP_003121491.2| PREDICTED: NAD-dependent malic enzyme, mitochondrial [Sus scrofa].
          Length = 502

 Score =  523 bits (1346), Expect = e-148
 Identities = 257/457 (56%), Positives = 330/457 (72%), Gaps = 4/457 (0%)
 Frame = +1

Query: 259  RPVPLKKRGYDVTRNPHLNKGMAFTLEERLQLGIHGLIPPCFLSQDVQLLRIMRYYERQQ 438
            R + +K++G  +  NP  NKGMAFTL+ER  LG+ GL+PP   +QD+Q LR  R  ++  
Sbjct: 18   RHLHIKEKGKPLMLNPRTNKGMAFTLQERQMLGLQGLLPPKIETQDIQALRFHRNVKKLN 77

Query: 439  SDLDKYIILMTLQDRNEKLFYRVLTSDVEKFMPIVYTPTVGLACQHYGLTFRRPRGLFIT 618
              L+KYI +M +Q+RNEKLFYR+L  D+E  MPIVYTPTVGLAC  YG  FRRP+GLFI+
Sbjct: 78   GPLEKYIYIMGIQERNEKLFYRILQDDIETLMPIVYTPTVGLACSQYGHIFRRPKGLFIS 137

Query: 619  IHDKGHLPTMLNSWPEDDIKAVVVTDGERILGLGDLGCYGMGIPVGKLALYTACGGVNPR 798
            I D+GH+ +++++WPE+ +KAVVVTDGERILGLGDLG YGMGIPVGKL LYTAC G+ P 
Sbjct: 138  ISDRGHVRSIVDNWPENHVKAVVVTDGERILGLGDLGVYGMGIPVGKLCLYTACAGIRPD 197

Query: 799  QCLPVLLDVGTNNEELLRDPLYIGLKHRRVRGQDYDDLLDEFMQAVTDKFGINCLIQFED 978
            +CLPV +DVGT+N  LL+DP Y+GL  +R R Q YDDL+DEFM+A+TD++G N LIQFED
Sbjct: 198  RCLPVCIDVGTDNPALLKDPFYMGLYQKRDRSQRYDDLIDEFMKAITDRYGRNILIQFED 257

Query: 979  FANANAFRLLNKYRNKYCMFNDDIQGTASVAVAGILAALRITKNKLSNHVFVFQGAGEAA 1158
            F N NAFR L KYR KYC FNDDIQGTA+VA+AG+LAA ++    +S H  +F GAGE +
Sbjct: 258  FGNHNAFRFLRKYREKYCTFNDDIQGTAAVALAGLLAAQKVIGKSISEHKILFLGAGEVS 317

Query: 1159 MG-IAHLLVMALEKEGVPKAEATRKIWMVDSRGLIVKGR-SHLNHEKEMFAQDHP--XXX 1326
               IA+L+VMA+ + G+ + EA +KIWMVD  GL+ KGR + ++  +E FA   P     
Sbjct: 318  CSWIANLIVMAMVENGLSEEEAQKKIWMVDKFGLLFKGRKAKIDSHQEPFAHPAPDNIPD 377

Query: 1327 XXXXXXXXXKPTXXXXXXXXXXXFTEQILRDMASFHERPIIFALSNPTSKAECTAEKCYR 1506
                     KP+           FT  +++ MA  +ERPIIFALSNPT++AECTAE+ Y 
Sbjct: 378  NFEDAVNILKPSAIIGVAGAGRLFTHNVIKAMADINERPIIFALSNPTAQAECTAEEAYT 437

Query: 1507 VTEGRGIFASGSPFKSVTLEDGRTFIPGQGNNAYVFP 1617
            +TEGR +FASGSPF  V L DG+ F PGQGNN Y+FP
Sbjct: 438  LTEGRCLFASGSPFGPVKLSDGQVFTPGQGNNVYIFP 474


  Database: RefSeq49_SP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 11,343,932
  Number of sequences in database:  24,897
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 24897
Number of Hits to DB: 51,064,329
Number of extensions: 1492246
Number of successful extensions: 7086
Number of sequences better than 1.0e-05: 3
Number of HSP's gapped: 6957
Number of HSP's successfully gapped: 3
Length of query: 680
Length of database: 11,343,932
Length adjustment: 106
Effective length of query: 574
Effective length of database: 8,704,850
Effective search space: 4996583900
Effective search space used: 4996583900
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)

Search to Sscrofa10_2

BLASTN 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= HTMT1_0093_E12
         (2042 letters)

Database: Sscrofa_10.2.fasta 
           4582 sequences; 2,808,509,378 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Sscrofa_Chr09                                                         472   e-130
Sscrofa_Chr01                                                          66   8e-08

>Sscrofa_Chr09 
||          Length = 153670197

 Score =  472 bits (238), Expect = e-130
 Identities = 238/238 (100%)
 Strand = Plus / Minus

                                                                            
Query: 1789     gtcctcgactacgcgtacaaacacaacctggcctcctactacccagagcccaaggacaag 1848
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22589869 gtcctcgactacgcgtacaaacacaacctggcctcctactacccagagcccaaggacaag 22589810

                                                                            
Query: 1849     gaggcttttgtaagatccctggtctatactccagactatgactcctttacgctggacagc 1908
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22589809 gaggcttttgtaagatccctggtctatactccagactatgactcctttacgctggacagc 22589750

                                                                            
Query: 1909     tacacttggcccaaggaagccatgaatgttcagaatgtctgatgcaattgcagaggttca 1968
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22589749 tacacttggcccaaggaagccatgaatgttcagaatgtctgatgcaattgcagaggttca 22589690

                                                                          
Query: 1969     tggggggctggatgaagcccaaagtaacactggaactataaatgggatccaaactggc 2026
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22589689 tggggggctggatgaagcccaaagtaacactggaactataaatgggatccaaactggc 22589632



 Score =  398 bits (201), Expect = e-108
 Identities = 201/201 (100%)
 Strand = Plus / Minus

                                                                            
Query: 119      aggtctgcgcaaggaccatgggtgcgtcgctgggcagcggcgcgcgggtggctctcctgc 178
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22780254 aggtctgcgcaaggaccatgggtgcgtcgctgggcagcggcgcgcgggtggctctcctgc 22780195

                                                                            
Query: 179      cccgccaggcctgcggcgccgtccggcgctgggcaccccccgcgcccgcccgaggctgcc 238
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22780194 cccgccaggcctgcggcgccgtccggcgctgggcaccccccgcgcccgcccgaggctgcc 22780135

                                                                            
Query: 239      actccaagacgggcctgccgcgtcctgtgcccctgaagaagcgcggatacgatgtcacca 298
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22780134 actccaagacgggcctgccgcgtcctgtgcccctgaagaagcgcggatacgatgtcacca 22780075

                                     
Query: 299      ggaatccgcatctcaacaagg 319
                |||||||||||||||||||||
Sbjct: 22780074 ggaatccgcatctcaacaagg 22780054



 Score =  327 bits (165), Expect = 1e-86
 Identities = 165/165 (100%)
 Strand = Plus / Minus

                                                                            
Query: 677      aggctgtggtggtgaccgatggggagcgcatcctgggcctgggagacctgggctgctacg 736
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22646698 aggctgtggtggtgaccgatggggagcgcatcctgggcctgggagacctgggctgctacg 22646639

                                                                            
Query: 737      gcatgggcatccccgtgggcaagctggccctgtacacggcgtgtggaggcgtcaaccctc 796
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22646638 gcatgggcatccccgtgggcaagctggccctgtacacggcgtgtggaggcgtcaaccctc 22646579

                                                             
Query: 797      ggcagtgcctccctgtcctgctggacgtcggcaccaacaacgagg 841
                |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22646578 ggcagtgcctccctgtcctgctggacgtcggcaccaacaacgagg 22646534



 Score =  317 bits (160), Expect = 1e-83
 Identities = 172/176 (97%)
 Strand = Plus / Minus

                                                                            
Query: 1514     agggccgagggatctttgccagtggaagtccttttaaaagcgtgaccctggaagatggca 1573
                ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 22593874 agggccgagggatctttgccagtgggagtccttttaaaagcgtgaccctggaagatggca 22593815

                                                                            
Query: 1574     ggaccttcattcctgggcagggcaacaacgcctacgtgttccccggagtggctctgggcg 1633
                ||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 22593814 ggaccttcattcccgggcagggaaacaacgcctacgtgttccccggagtggctctgggcg 22593755

                                                                        
Query: 1634     tcatcgctggtgggatccggcacatcccagacgagatcttcctcctgacagcagag 1689
                |||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22593754 tcatcgctggcgggatccggcacatcccagacgagatcttcctcctgacagcagag 22593699



 Score =  297 bits (150), Expect = 1e-77
 Identities = 150/150 (100%)
 Strand = Plus / Minus

                                                                            
Query: 453      gtacatcattctgatgaccctccaagaccggaacgagaagctcttctaccgagtgctgac 512
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22689205 gtacatcattctgatgaccctccaagaccggaacgagaagctcttctaccgagtgctgac 22689146

                                                                            
Query: 513      gtccgacgtggagaaattcatgcccatcgtgtacacgcccaccgtgggactggcctgtca 572
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22689145 gtccgacgtggagaaattcatgcccatcgtgtacacgcccaccgtgggactggcctgtca 22689086

                                              
Query: 573      gcactacggcctgaccttccgcaggccccg 602
                ||||||||||||||||||||||||||||||
Sbjct: 22689085 gcactacggcctgaccttccgcaggccccg 22689056



 Score =  291 bits (147), Expect = 8e-76
 Identities = 147/147 (100%)
 Strand = Plus / Minus

                                                                            
Query: 1370     taggtgttgccgccatcgcaggagccttcacggagcagattctgagggacatggcctcct 1429
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22594573 taggtgttgccgccatcgcaggagccttcacggagcagattctgagggacatggcctcct 22594514

                                                                            
Query: 1430     tccacgagcgccctatcatctttgccctgagcaaccccaccagcaaggccgagtgcacgg 1489
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22594513 tccacgagcgccctatcatctttgccctgagcaaccccaccagcaaggccgagtgcacgg 22594454

                                           
Query: 1490     ctgagaagtgctaccgggtcaccgagg 1516
                |||||||||||||||||||||||||||
Sbjct: 22594453 ctgagaagtgctaccgggtcaccgagg 22594427



 Score =  240 bits (121), Expect = 3e-60
 Identities = 121/121 (100%)
 Strand = Plus / Minus

                                                                            
Query: 2        agcgcctcgccccgcctgccccgcagccgggtcgcgtagacatcagctccgggcacagca 61
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22780675 agcgcctcgccccgcctgccccgcagccgggtcgcgtagacatcagctccgggcacagca 22780616

                                                                            
Query: 62       caggtgggctggggaagccagagacccaggcgctccaccgccaccgatcgggattggagg 121
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22780615 caggtgggctggggaagccagagacccaggcgctccaccgccaccgatcgggattggagg 22780556

                 
Query: 122      t 122
                |
Sbjct: 22780555 t 22780555



 Score =  232 bits (117), Expect = 6e-58
 Identities = 117/117 (100%)
 Strand = Plus / Minus

                                                                            
Query: 1151     aggcagccatgggcatcgcccacctccttgtcatggccctagagaaagaaggtgtaccca 1210
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22597849 aggcagccatgggcatcgcccacctccttgtcatggccctagagaaagaaggtgtaccca 22597790

                                                                         
Query: 1211     aggcagaggccacaaggaagatctggatggtggactccagagggctcattgtcaagg 1267
                |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22597789 aggcagaggccacaaggaagatctggatggtggactccagagggctcattgtcaagg 22597733



 Score =  232 bits (117), Expect = 6e-58
 Identities = 131/138 (94%)
 Strand = Plus / Minus

                                                                            
Query: 317      agggtatggccttcacacttgaagaaaggctgcagcttggaatccatggcctaatnnnnn 376
                |||||||||||||||||||||||||||||||||||||||||||||||||||||||     
Sbjct: 22691970 agggtatggccttcacacttgaagaaaggctgcagcttggaatccatggcctaatccccc 22691911

                                                                            
Query: 377      nntgcttcttgagccaggacgtccagctcctccggatcatgagatactacgagcggcagc 436
                  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22691910 cctgcttcttgagccaggacgtccagctcctccggatcatgagatactacgagcggcagc 22691851

                                  
Query: 437      agagtgacctggacaagt 454
                ||||||||||||||||||
Sbjct: 22691850 agagtgacctggacaagt 22691833



 Score =  220 bits (111), Expect = 2e-54
 Identities = 111/111 (100%)
 Strand = Plus / Minus

                                                                            
Query: 945      gtttggaataaattgcctcattcagtttgaagactttgccaacgccaatgccttccgcct 1004
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22612565 gtttggaataaattgcctcattcagtttgaagactttgccaacgccaatgccttccgcct 22612506

                                                                   
Query: 1005     tctcaacaaataccgcaacaagtactgcatgttcaacgatgacatccaagg 1055
                |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22612505 tctcaacaaataccgcaacaagtactgcatgttcaacgatgacatccaagg 22612455



 Score =  214 bits (108), Expect = 1e-52
 Identities = 108/108 (100%)
 Strand = Plus / Minus

                                                                            
Query: 839      aggagctgctccgagaccctctgtacatcggcctgaagcaccggcgcgtgcgcggccaag 898
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22635204 aggagctgctccgagaccctctgtacatcggcctgaagcaccggcgcgtgcgcggccaag 22635145

                                                                
Query: 899      attacgacgaccttctggacgagttcatgcaggctgtgacggacaagt 946
                ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22635144 attacgacgaccttctggacgagttcatgcaggctgtgacggacaagt 22635097



 Score =  210 bits (106), Expect = 2e-51
 Identities = 109/110 (99%)
 Strand = Plus / Minus

                                                                            
Query: 1265     aggggaggagccacctgaaccatgagaaggagatgtttgcccaggaccatcctgaagtga 1324
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22595699 aggggaggagccacctgaaccatgagaaggagatgtttgcccaggaccatcctgaagtga 22595640

                                                                  
Query: 1325     gctccctcgaggaggtggtgaggctggtgaagcccacggccatcataggt 1374
                ||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 22595639 gctccctcgaggaggtggtgaggctggtgaagcccacagccatcataggt 22595590



 Score =  204 bits (103), Expect = 1e-49
 Identities = 103/103 (100%)
 Strand = Plus / Minus

                                                                            
Query: 1688     agcaaattgcccaagaggtctcggagcagcatctgtcacaggggagactgtacccaccgc 1747
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22591655 agcaaattgcccaagaggtctcggagcagcatctgtcacaggggagactgtacccaccgc 22591596

                                                           
Query: 1748     tcagcaccatccgagacgtgtctctgagaatcgccatcaaagt 1790
                |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22591595 tcagcaccatccgagacgtgtctctgagaatcgccatcaaagt 22591553



 Score =  159 bits (80), Expect = 7e-36
 Identities = 95/100 (95%)
 Strand = Plus / Minus

                                                                            
Query: 1054     ggcacagcctccgtcgctgtggcagggatcctggctgctctgcgaatcaccaagaacaag 1113
                |||||||| ||||||| || ||||||||||| |||||||||||||||||||||| |||||
Sbjct: 22598200 ggcacagcatccgtcgatgcggcagggatccaggctgctctgcgaatcaccaaggacaag 22598141

                                                        
Query: 1114     ctctccaaccacgtgtttgttttccaaggtgccggtgagg 1153
                ||||||||||||||||||||||||||||||||||||||||
Sbjct: 22598140 ctctccaaccacgtgtttgttttccaaggtgccggtgagg 22598101



 Score =  155 bits (78), Expect = 1e-34
 Identities = 78/78 (100%)
 Strand = Plus / Minus

                                                                            
Query: 602      gtgggctctttatcaccattcatgacaagggccatcttccaacaatgctgaactcttggc 661
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22656478 gtgggctctttatcaccattcatgacaagggccatcttccaacaatgctgaactcttggc 22656419

                                  
Query: 662      cagaagatgatattaagg 679
                ||||||||||||||||||
Sbjct: 22656418 cagaagatgatattaagg 22656401


>Sscrofa_Chr01 
||          Length = 315321322

 Score = 65.9 bits (33), Expect = 8e-08
 Identities = 90/109 (82%)
 Strand = Plus / Plus

                                                                            
Query: 677      aggctgtggtggtgaccgatggggagcgcatcctgggcctgggagacctgggctgctacg 736
                ||||||| |||||||| ||||| || || || || |||||||||||||| |||||  |||
Sbjct: 93129350 aggctgtcgtggtgactgatggagaacgtattcttggcctgggagaccttggctgtaacg 93129409

                                                                 
Query: 737      gcatgggcatccccgtgggcaagctggccctgtacacggcgtgtggagg 785
                | ||||||||||| ||||| || ||||| || || || || ||||||||
Sbjct: 93129410 ggatgggcatccctgtgggtaaactggcactctatacagcatgtggagg 93129458


  Database: Sscrofa_10.2.fasta
    Posted date:  Nov 16, 2011 10:34 AM
  Number of letters in database: 2,808,509,378
  Number of sequences in database:  4582
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4582
Number of Hits to DB: 49,610,298
Number of extensions: 240
Number of successful extensions: 240
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 239
Number of HSP's successfully gapped: 16
Length of query: 2042
Length of database: 2,808,509,378
Length adjustment: 22
Effective length of query: 2020
Effective length of database: 2,808,408,574
Effective search space: 5672985319480
Effective search space used: 5672985319480
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 18 (36.2 bits)
S2: 30 (60.0 bits)