Search to RefSeqBP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= HTMT1_0093_E12
(2042 letters)
Database: RefSeq49_BP.fasta
33,088 sequences; 17,681,374 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001069345.1| NADP-dependent malic enzyme, mitochondrial [... 1097 0.0
Alignment gi|NP_001138325.1| NADP-dependent malic enzyme [Bos taurus]. 783 0.0
Alignment gi|NP_001070282.1| NAD-dependent malic enzyme, mitochondrial [B... 636 0.0
Alignment gi|XP_002683959.1| PREDICTED: predicted protein-like, partial [... 62 2e-09
>ref|NP_001069345.1| NADP-dependent malic enzyme, mitochondrial [Bos taurus].
Length = 604
Score = 1097 bits (2836), Expect = 0.0
Identities = 543/604 (89%), Positives = 557/604 (92%)
Frame = +1
Query: 136 MGASLGSGARVALLPRQACGAVXXXXXXXXXXGCHSKTGLPRPVPLKKRGYDVTRNPHLN 315
MGA+LG+GAR+ L +ACGAV GCHSK RPVPLKKRGYDVTRNPHLN
Sbjct: 1 MGAALGTGARLTLRSGRACGAVRSWAPPAPARGCHSKARPARPVPLKKRGYDVTRNPHLN 60
Query: 316 KGMAFTLEERLQLGIHGLIPPCFLSQDVQLLRIMRYYERQQSDLDKYIILMTLQDRNEKL 495
KGMAFTLEERLQLGIHGLIPPCFLSQDVQLLR+MRYYERQQSDLDKYIILMTLQDRNEKL
Sbjct: 61 KGMAFTLEERLQLGIHGLIPPCFLSQDVQLLRVMRYYERQQSDLDKYIILMTLQDRNEKL 120
Query: 496 FYRVLTSDVEKFMPIVYTPTVGLACQHYGLTFRRPRGLFITIHDKGHLPTMLNSWPEDDI 675
FYRVLTSDVEKF+PIVYTPTVGLACQHYGLTFRRPRGLFIT+HDKGHL TMLNSWPEDDI
Sbjct: 121 FYRVLTSDVEKFLPIVYTPTVGLACQHYGLTFRRPRGLFITVHDKGHLATMLNSWPEDDI 180
Query: 676 KAVVVTDGERILGLGDLGCYGMGIPVGKLALYTACGGVNPRQCLPVLLDVGTNNEELLRD 855
KAVVVTDGERILGLGDLGCYGMGIPVGKLALYTACGGVNPRQCLPVLLDVGTNNEELLRD
Sbjct: 181 KAVVVTDGERILGLGDLGCYGMGIPVGKLALYTACGGVNPRQCLPVLLDVGTNNEELLRD 240
Query: 856 PLYIGLKHRRVRGQDYDDLLDEFMQAVTDKFGINCLIQFEDFANANAFRLLNKYRNKYCM 1035
PLYIGLKHRRVRGQ+YDDLLDEFMQAVTDKFGINCLIQFEDFANANAFRLLNKYRNKYCM
Sbjct: 241 PLYIGLKHRRVRGQEYDDLLDEFMQAVTDKFGINCLIQFEDFANANAFRLLNKYRNKYCM 300
Query: 1036 FNDDIQGTASVAVAGILAALRITKNKLSNHVFVFQGAGEAAMGIAHLLVMALEKEGVPKA 1215
FNDDIQGTASVAVAGILAALRITKNKLSNHVFVFQGAGEAAMGIAHLLVMALEKEGVPKA
Sbjct: 301 FNDDIQGTASVAVAGILAALRITKNKLSNHVFVFQGAGEAAMGIAHLLVMALEKEGVPKA 360
Query: 1216 EATRKIWMVDSRGLIVKGRSHLNHEKEMFAQDHPXXXXXXXXXXXXKPTXXXXXXXXXXX 1395
EATRKIWMVDS+GLIVKGRSHLNHEKEMFAQDHP KPT
Sbjct: 361 EATRKIWMVDSKGLIVKGRSHLNHEKEMFAQDHPEVNSLEEVVRLVKPTAIIGVAAIAGA 420
Query: 1396 FTEQILRDMASFHERPIIFALSNPTSKAECTAEKCYRVTEGRGIFASGSPFKSVTLEDGR 1575
FTEQILRDMASFHE PIIFALSNPTSKAECTAEKCYRVTEGRGIFASGSPF SVTLEDGR
Sbjct: 421 FTEQILRDMASFHEHPIIFALSNPTSKAECTAEKCYRVTEGRGIFASGSPFPSVTLEDGR 480
Query: 1576 TFIPGQGNNAYVFPGVALGVIAGGIRHIPDEIFLLTAEQIAQEVSEQHLSQGRLYPPLST 1755
TF PGQGNNAYVFPGVALGVIAGGIRHIPDEIFLLTAEQIAQEVSE HLSQGRLYPPLST
Sbjct: 481 TFFPGQGNNAYVFPGVALGVIAGGIRHIPDEIFLLTAEQIAQEVSEHHLSQGRLYPPLST 540
Query: 1756 IRDVSLRIAIKVLDYAYKHNLASYYPEPKDKEAFVRSLVYTPDYDSFTLDSYTWPKEAMN 1935
IRDVSLRIAIKVLD+AYKHNLASYYPEP+DKEAFVRSLVYTP+YDSFTLDSYTWP+EAMN
Sbjct: 541 IRDVSLRIAIKVLDFAYKHNLASYYPEPEDKEAFVRSLVYTPEYDSFTLDSYTWPEEAMN 600
Query: 1936 VQNV 1947
VQ +
Sbjct: 601 VQTI 604
>ref|NP_001138325.1| NADP-dependent malic enzyme [Bos taurus].
Length = 568
Score = 783 bits (2023), Expect = 0.0
Identities = 377/542 (69%), Positives = 449/542 (82%)
Frame = +1
Query: 316 KGMAFTLEERLQLGIHGLIPPCFLSQDVQLLRIMRYYERQQSDLDKYIILMTLQDRNEKL 495
+ +AFTLEER QL IHGL+PP F+SQDVQ+LR+++ +ER SD D+Y++LM LQDRNEKL
Sbjct: 23 RDLAFTLEERQQLNIHGLLPPSFISQDVQVLRVLKNFERLNSDFDRYLLLMDLQDRNEKL 82
Query: 496 FYRVLTSDVEKFMPIVYTPTVGLACQHYGLTFRRPRGLFITIHDKGHLPTMLNSWPEDDI 675
FY+VL SD+EKFMPIVYTPTVGLACQ Y L FR+PRGLFI+IHD+GH+ ++LN+WPED I
Sbjct: 83 FYKVLMSDIEKFMPIVYTPTVGLACQQYSLAFRKPRGLFISIHDRGHISSVLNAWPEDVI 142
Query: 676 KAVVVTDGERILGLGDLGCYGMGIPVGKLALYTACGGVNPRQCLPVLLDVGTNNEELLRD 855
KA+VVTDGERILGLGDLGC GMGIPVGKLALYTACGG+NP+QCLPV+LDVGT NEELL+D
Sbjct: 143 KAIVVTDGERILGLGDLGCNGMGIPVGKLALYTACGGMNPQQCLPVMLDVGTENEELLKD 202
Query: 856 PLYIGLKHRRVRGQDYDDLLDEFMQAVTDKFGINCLIQFEDFANANAFRLLNKYRNKYCM 1035
PLYIGL+ RRVRG +YDD LDEFM+AV+ K+G+NCLIQFEDFAN NAFRLL KY+N+YC
Sbjct: 203 PLYIGLRQRRVRGPEYDDFLDEFMEAVSLKYGMNCLIQFEDFANINAFRLLRKYQNQYCT 262
Query: 1036 FNDDIQGTASVAVAGILAALRITKNKLSNHVFVFQGAGEAAMGIAHLLVMALEKEGVPKA 1215
FNDDIQGTASVAVAGILAALRITKNKLS +FQGAGEAA+GIAHL+VMA+EKEG+ K
Sbjct: 263 FNDDIQGTASVAVAGILAALRITKNKLSEQTVLFQGAGEAALGIAHLIVMAMEKEGLSKE 322
Query: 1216 EATRKIWMVDSRGLIVKGRSHLNHEKEMFAQDHPXXXXXXXXXXXXKPTXXXXXXXXXXX 1395
+A KIW+VDS+GLIVKGR+ L E E FA +H KPT
Sbjct: 323 QAIEKIWLVDSKGLIVKGRAALTQEIEEFAHEHKEMKNLEAIVQDIKPTALIGVAAIGGA 382
Query: 1396 FTEQILRDMASFHERPIIFALSNPTSKAECTAEKCYRVTEGRGIFASGSPFKSVTLEDGR 1575
F+EQI++DMA+F+ERPIIFALSNPTSKAECTAE+CY++T+GR IFASGSPF VTL G+
Sbjct: 383 FSEQIIKDMAAFNERPIIFALSNPTSKAECTAEQCYKLTKGRAIFASGSPFDPVTLPSGK 442
Query: 1576 TFIPGQGNNAYVFPGVALGVIAGGIRHIPDEIFLLTAEQIAQEVSEQHLSQGRLYPPLST 1755
+ PGQGNN+YVFPGVALGV+A G+RHI D+IFL TAE IAQ+VS++HL +GRLYPPL T
Sbjct: 443 SLYPGQGNNSYVFPGVALGVVACGLRHITDKIFLTTAEVIAQQVSDKHLEEGRLYPPLDT 502
Query: 1756 IRDVSLRIAIKVLDYAYKHNLASYYPEPKDKEAFVRSLVYTPDYDSFTLDSYTWPKEAMN 1935
IRDVSL+IA K++ AY+ A+ YPEP +KEAFVRS +Y+ DYD D Y WPKEA
Sbjct: 503 IRDVSLKIAEKIVKDAYQEKTATVYPEPPNKEAFVRSQMYSTDYDQILPDCYPWPKEAQK 562
Query: 1936 VQ 1941
+Q
Sbjct: 563 IQ 564
>ref|NP_001070282.1| NAD-dependent malic enzyme, mitochondrial [Bos taurus].
Length = 584
Score = 636 bits (1640), Expect = 0.0
Identities = 309/560 (55%), Positives = 404/560 (72%), Gaps = 3/560 (0%)
Frame = +1
Query: 259 RPVPLKKRGYDVTRNPHLNKGMAFTLEERLQLGIHGLIPPCFLSQDVQLLRIMRYYERQQ 438
R + K++G + NP NKGMAFTL+ER LG+ GL+PP +QD+Q LR R ++
Sbjct: 17 RHLHTKEKGKPLMLNPRTNKGMAFTLQERQMLGLQGLLPPKIETQDIQALRFHRNLKKLN 76
Query: 439 SDLDKYIILMTLQDRNEKLFYRVLTSDVEKFMPIVYTPTVGLACQHYGLTFRRPRGLFIT 618
L+KYI +M +Q+RNEKLFYR+L D+E MPIVYTPTVGLAC YG FRRP+GLFI+
Sbjct: 77 GPLEKYIYIMGIQERNEKLFYRILQDDIETLMPIVYTPTVGLACSQYGHIFRRPKGLFIS 136
Query: 619 IHDKGHLPTMLNSWPEDDIKAVVVTDGERILGLGDLGCYGMGIPVGKLALYTACGGVNPR 798
I D+GH+ +++++WPE+ +KAVVVTDGERILGLGDLG YGMGIPVGKL LYTAC G+ P
Sbjct: 137 ISDRGHVRSIVDNWPENHVKAVVVTDGERILGLGDLGVYGMGIPVGKLCLYTACAGIRPD 196
Query: 799 QCLPVLLDVGTNNEELLRDPLYIGLKHRRVRGQDYDDLLDEFMQAVTDKFGINCLIQFED 978
+CLPV +DVGT+N LL+DP Y+GL +R R Q YDDL+DEFM+A+TD++G N LIQFED
Sbjct: 197 RCLPVCIDVGTDNPALLKDPFYMGLYQKRDRSQRYDDLIDEFMKAITDRYGQNTLIQFED 256
Query: 979 FANANAFRLLNKYRNKYCMFNDDIQGTASVAVAGILAALRITKNKLSNHVFVFQGAGEAA 1158
F N NAFR L KYR KYC FNDDIQGTA+VA+AG+LAA ++ +S+H +F GAGEAA
Sbjct: 257 FGNHNAFRFLRKYREKYCTFNDDIQGTAAVALAGLLAAQKVIGKPISDHRILFLGAGEAA 316
Query: 1159 MGIAHLLVMALEKEGVPKAEATRKIWMVDSRGLIVKGR-SHLNHEKEMFAQDHP--XXXX 1329
+GIA+L+VMA+ + G+ + EA +KIWMVD GL+ KGR + + +E FA P
Sbjct: 317 LGIANLIVMAMVENGLSEEEARKKIWMVDKFGLLFKGRKAKIESHQEAFAHSAPESLPDT 376
Query: 1330 XXXXXXXXKPTXXXXXXXXXXXFTEQILRDMASFHERPIIFALSNPTSKAECTAEKCYRV 1509
KP+ FT +++ MA +ERPIIFALSNPT++AECTAE+ Y +
Sbjct: 377 FEEAVNILKPSAIIGVAGAGRLFTPGVIKAMAEINERPIIFALSNPTAQAECTAEEAYTL 436
Query: 1510 TEGRGIFASGSPFKSVTLEDGRTFIPGQGNNAYVFPGVALGVIAGGIRHIPDEIFLLTAE 1689
TEGR +FASGSPF+ V L DG+ F PGQGNN Y+FPGVAL VI RHI D +FL A+
Sbjct: 437 TEGRCLFASGSPFEPVKLSDGQVFTPGQGNNVYIFPGVALAVILCNTRHISDHVFLEAAK 496
Query: 1690 QIAQEVSEQHLSQGRLYPPLSTIRDVSLRIAIKVLDYAYKHNLASYYPEPKDKEAFVRSL 1869
+ +++++ L+QGRLYPPLS I++VS+ IAIKV +Y Y + +A YPEP+DK ++R
Sbjct: 497 ALTSQLTDKELAQGRLYPPLSNIQEVSINIAIKVTEYLYANKMAFRYPEPEDKAKYIRER 556
Query: 1870 VYTPDYDSFTLDSYTWPKEA 1929
++ +YDS D Y WP+ A
Sbjct: 557 IWRSEYDSLLPDVYEWPEAA 576
>ref|XP_002683959.1| PREDICTED: predicted protein-like, partial [Bos taurus].
Length = 341
Score = 62.0 bits (149), Expect = 2e-09
Identities = 83/343 (24%), Positives = 126/343 (36%), Gaps = 4/343 (1%)
Frame = +1
Query: 685 VVTDGERILGLGDLG-CYGMGIPVGKLALYTACGGVNPRQCLPVLLDVGTNNEELLRDPL 861
V++DG ILGLG+LG + GK L+ G++ + D+ ++E
Sbjct: 37 VISDGTAILGLGNLGPLASKPVMEGKGVLFKRFAGID-------VFDIEVDSES------ 83
Query: 862 YIGLKHRRVRGQDYDDLLDEFMQAVTDKFGINCLIQFEDFANANAFRLLNKYRNKYC--- 1032
+ ++ ++ FG I ED F + + + C
Sbjct: 84 --------------PQAFIDTVKRISITFGG---INLEDIKAPECFEI-ERALIEQCDIP 125
Query: 1033 MFNDDIQGTASVAVAGILAALRITKNKLSNHVFVFQGAGEAAMGIAHLLVMALEKEGVPK 1212
+F+DD GTA V AG++ AL I L V GAG AA+ LLV K
Sbjct: 126 VFHDDQHGTAIVTAAGMINALEIAGKTLPEAKIVCLGAGAAAISCMKLLVSMGAK----- 180
Query: 1213 AEATRKIWMVDSRGLIVKGRSHLNHEKEMFAQDHPXXXXXXXXXXXXKPTXXXXXXXXXX 1392
I+MVD G+I GR LN K +FA +
Sbjct: 181 ---IENIFMVDRTGVIHSGRDDLNQYKAVFAH----TTDKRSLADALQGADVFVGLSGPN 233
Query: 1393 XFTEQILRDMASFHERPIIFALSNPTSKAECTAEKCYRVTEGRGIFASGSPFKSVTLEDG 1572
+ + L MA+ PI+FA SNP + R V + G
Sbjct: 234 LLSAEGLLSMAA---NPIVFACSNPDPEISPELAHATR--------------SDVIMATG 276
Query: 1573 RTFIPGQGNNAYVFPGVALGVIAGGIRHIPDEIFLLTAEQIAQ 1701
R+ P Q NN FP + G + + I +E+ + A + +
Sbjct: 277 RSDYPNQVNNVLGFPFIFRGALDVRAKRINEEMKVAAANALRE 319
Database: RefSeq49_BP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 17,681,374
Number of sequences in database: 33,088
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33088
Number of Hits to DB: 79,088,036
Number of extensions: 2309718
Number of successful extensions: 10849
Number of sequences better than 1.0e-05: 4
Number of HSP's gapped: 10742
Number of HSP's successfully gapped: 5
Length of query: 680
Length of database: 17,681,374
Length adjustment: 109
Effective length of query: 571
Effective length of database: 14,074,782
Effective search space: 8036700522
Effective search space used: 8036700522
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Animal-Genome cDNA HTMT1_0093_E12
Search to RefSeqHP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= HTMT1_0093_E12
(2042 letters)
Database: RefSeq49_HP.fasta
32,964 sequences; 18,297,164 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001155058.1| NADP-dependent malic enzyme, mitochondrial p... 1103 0.0
Alignment gi|NP_001014811.1| NADP-dependent malic enzyme, mitochondrial p... 1103 0.0
Alignment gi|NP_006671.2| NADP-dependent malic enzyme, mitochondrial prec... 1103 0.0
Alignment gi|NP_002386.1| NADP-dependent malic enzyme [Homo sapiens]. 816 0.0
Alignment gi|NP_002387.1| NAD-dependent malic enzyme, mitochondrial isofo... 637 0.0
Alignment gi|NP_001161807.1| NAD-dependent malic enzyme, mitochondrial is... 538 e-153
>ref|NP_001155058.1| NADP-dependent malic enzyme, mitochondrial precursor [Homo sapiens].
Length = 604
Score = 1103 bits (2854), Expect = 0.0
Identities = 549/604 (90%), Positives = 560/604 (92%)
Frame = +1
Query: 136 MGASLGSGARVALLPRQACGAVXXXXXXXXXXGCHSKTGLPRPVPLKKRGYDVTRNPHLN 315
MGA+LG+G R+A P +ACGA+ GCHSK G RPVPLKKRGYDVTRNPHLN
Sbjct: 1 MGAALGTGTRLAPWPGRACGALPRWTPTAPAQGCHSKPGPARPVPLKKRGYDVTRNPHLN 60
Query: 316 KGMAFTLEERLQLGIHGLIPPCFLSQDVQLLRIMRYYERQQSDLDKYIILMTLQDRNEKL 495
KGMAFTLEERLQLGIHGLIPPCFLSQDVQLLRIMRYYERQQSDLDKYIILMTLQDRNEKL
Sbjct: 61 KGMAFTLEERLQLGIHGLIPPCFLSQDVQLLRIMRYYERQQSDLDKYIILMTLQDRNEKL 120
Query: 496 FYRVLTSDVEKFMPIVYTPTVGLACQHYGLTFRRPRGLFITIHDKGHLPTMLNSWPEDDI 675
FYRVLTSDVEKFMPIVYTPTVGLACQHYGLTFRRPRGLFITIHDKGHL TMLNSWPED+I
Sbjct: 121 FYRVLTSDVEKFMPIVYTPTVGLACQHYGLTFRRPRGLFITIHDKGHLATMLNSWPEDNI 180
Query: 676 KAVVVTDGERILGLGDLGCYGMGIPVGKLALYTACGGVNPRQCLPVLLDVGTNNEELLRD 855
KAVVVTDGERILGLGDLGCYGMGIPVGKLALYTACGGVNP+QCLPVLLDVGTNNEELLRD
Sbjct: 181 KAVVVTDGERILGLGDLGCYGMGIPVGKLALYTACGGVNPQQCLPVLLDVGTNNEELLRD 240
Query: 856 PLYIGLKHRRVRGQDYDDLLDEFMQAVTDKFGINCLIQFEDFANANAFRLLNKYRNKYCM 1035
PLYIGLKH+RV G+ YDDLLDEFMQAVTDKFGINCLIQFEDFANANAFRLLNKYRNKYCM
Sbjct: 241 PLYIGLKHQRVHGKAYDDLLDEFMQAVTDKFGINCLIQFEDFANANAFRLLNKYRNKYCM 300
Query: 1036 FNDDIQGTASVAVAGILAALRITKNKLSNHVFVFQGAGEAAMGIAHLLVMALEKEGVPKA 1215
FNDDIQGTASVAVAGILAALRITKNKLSNHVFVFQGAGEAAMGIAHLLVMALEKEGVPKA
Sbjct: 301 FNDDIQGTASVAVAGILAALRITKNKLSNHVFVFQGAGEAAMGIAHLLVMALEKEGVPKA 360
Query: 1216 EATRKIWMVDSRGLIVKGRSHLNHEKEMFAQDHPXXXXXXXXXXXXKPTXXXXXXXXXXX 1395
EATRKIWMVDS+GLIVKGRSHLNHEKEMFAQDHP KPT
Sbjct: 361 EATRKIWMVDSKGLIVKGRSHLNHEKEMFAQDHPEVNSLEEVVRLVKPTAIIGVAAIAGA 420
Query: 1396 FTEQILRDMASFHERPIIFALSNPTSKAECTAEKCYRVTEGRGIFASGSPFKSVTLEDGR 1575
FTEQILRDMASFHERPIIFALSNPTSKAECTAEKCYRVTEGRGIFASGSPFKSVTLEDG+
Sbjct: 421 FTEQILRDMASFHERPIIFALSNPTSKAECTAEKCYRVTEGRGIFASGSPFKSVTLEDGK 480
Query: 1576 TFIPGQGNNAYVFPGVALGVIAGGIRHIPDEIFLLTAEQIAQEVSEQHLSQGRLYPPLST 1755
TFIPGQGNNAYVFPGVALGVIAGGIRHIPDEIFLLTAEQIAQEVSEQHLSQGRLYPPLST
Sbjct: 481 TFIPGQGNNAYVFPGVALGVIAGGIRHIPDEIFLLTAEQIAQEVSEQHLSQGRLYPPLST 540
Query: 1756 IRDVSLRIAIKVLDYAYKHNLASYYPEPKDKEAFVRSLVYTPDYDSFTLDSYTWPKEAMN 1935
IRDVSLRIAIKVLDYAYKHNLASYYPEPKDKEAFVRSLVYTPDYDSFTLDSYTWPKEAMN
Sbjct: 541 IRDVSLRIAIKVLDYAYKHNLASYYPEPKDKEAFVRSLVYTPDYDSFTLDSYTWPKEAMN 600
Query: 1936 VQNV 1947
VQ V
Sbjct: 601 VQTV 604
>ref|NP_001014811.1| NADP-dependent malic enzyme, mitochondrial precursor [Homo sapiens].
Length = 604
Score = 1103 bits (2854), Expect = 0.0
Identities = 549/604 (90%), Positives = 560/604 (92%)
Frame = +1
Query: 136 MGASLGSGARVALLPRQACGAVXXXXXXXXXXGCHSKTGLPRPVPLKKRGYDVTRNPHLN 315
MGA+LG+G R+A P +ACGA+ GCHSK G RPVPLKKRGYDVTRNPHLN
Sbjct: 1 MGAALGTGTRLAPWPGRACGALPRWTPTAPAQGCHSKPGPARPVPLKKRGYDVTRNPHLN 60
Query: 316 KGMAFTLEERLQLGIHGLIPPCFLSQDVQLLRIMRYYERQQSDLDKYIILMTLQDRNEKL 495
KGMAFTLEERLQLGIHGLIPPCFLSQDVQLLRIMRYYERQQSDLDKYIILMTLQDRNEKL
Sbjct: 61 KGMAFTLEERLQLGIHGLIPPCFLSQDVQLLRIMRYYERQQSDLDKYIILMTLQDRNEKL 120
Query: 496 FYRVLTSDVEKFMPIVYTPTVGLACQHYGLTFRRPRGLFITIHDKGHLPTMLNSWPEDDI 675
FYRVLTSDVEKFMPIVYTPTVGLACQHYGLTFRRPRGLFITIHDKGHL TMLNSWPED+I
Sbjct: 121 FYRVLTSDVEKFMPIVYTPTVGLACQHYGLTFRRPRGLFITIHDKGHLATMLNSWPEDNI 180
Query: 676 KAVVVTDGERILGLGDLGCYGMGIPVGKLALYTACGGVNPRQCLPVLLDVGTNNEELLRD 855
KAVVVTDGERILGLGDLGCYGMGIPVGKLALYTACGGVNP+QCLPVLLDVGTNNEELLRD
Sbjct: 181 KAVVVTDGERILGLGDLGCYGMGIPVGKLALYTACGGVNPQQCLPVLLDVGTNNEELLRD 240
Query: 856 PLYIGLKHRRVRGQDYDDLLDEFMQAVTDKFGINCLIQFEDFANANAFRLLNKYRNKYCM 1035
PLYIGLKH+RV G+ YDDLLDEFMQAVTDKFGINCLIQFEDFANANAFRLLNKYRNKYCM
Sbjct: 241 PLYIGLKHQRVHGKAYDDLLDEFMQAVTDKFGINCLIQFEDFANANAFRLLNKYRNKYCM 300
Query: 1036 FNDDIQGTASVAVAGILAALRITKNKLSNHVFVFQGAGEAAMGIAHLLVMALEKEGVPKA 1215
FNDDIQGTASVAVAGILAALRITKNKLSNHVFVFQGAGEAAMGIAHLLVMALEKEGVPKA
Sbjct: 301 FNDDIQGTASVAVAGILAALRITKNKLSNHVFVFQGAGEAAMGIAHLLVMALEKEGVPKA 360
Query: 1216 EATRKIWMVDSRGLIVKGRSHLNHEKEMFAQDHPXXXXXXXXXXXXKPTXXXXXXXXXXX 1395
EATRKIWMVDS+GLIVKGRSHLNHEKEMFAQDHP KPT
Sbjct: 361 EATRKIWMVDSKGLIVKGRSHLNHEKEMFAQDHPEVNSLEEVVRLVKPTAIIGVAAIAGA 420
Query: 1396 FTEQILRDMASFHERPIIFALSNPTSKAECTAEKCYRVTEGRGIFASGSPFKSVTLEDGR 1575
FTEQILRDMASFHERPIIFALSNPTSKAECTAEKCYRVTEGRGIFASGSPFKSVTLEDG+
Sbjct: 421 FTEQILRDMASFHERPIIFALSNPTSKAECTAEKCYRVTEGRGIFASGSPFKSVTLEDGK 480
Query: 1576 TFIPGQGNNAYVFPGVALGVIAGGIRHIPDEIFLLTAEQIAQEVSEQHLSQGRLYPPLST 1755
TFIPGQGNNAYVFPGVALGVIAGGIRHIPDEIFLLTAEQIAQEVSEQHLSQGRLYPPLST
Sbjct: 481 TFIPGQGNNAYVFPGVALGVIAGGIRHIPDEIFLLTAEQIAQEVSEQHLSQGRLYPPLST 540
Query: 1756 IRDVSLRIAIKVLDYAYKHNLASYYPEPKDKEAFVRSLVYTPDYDSFTLDSYTWPKEAMN 1935
IRDVSLRIAIKVLDYAYKHNLASYYPEPKDKEAFVRSLVYTPDYDSFTLDSYTWPKEAMN
Sbjct: 541 IRDVSLRIAIKVLDYAYKHNLASYYPEPKDKEAFVRSLVYTPDYDSFTLDSYTWPKEAMN 600
Query: 1936 VQNV 1947
VQ V
Sbjct: 601 VQTV 604
>ref|NP_006671.2| NADP-dependent malic enzyme, mitochondrial precursor [Homo sapiens].
Length = 604
Score = 1103 bits (2854), Expect = 0.0
Identities = 549/604 (90%), Positives = 560/604 (92%)
Frame = +1
Query: 136 MGASLGSGARVALLPRQACGAVXXXXXXXXXXGCHSKTGLPRPVPLKKRGYDVTRNPHLN 315
MGA+LG+G R+A P +ACGA+ GCHSK G RPVPLKKRGYDVTRNPHLN
Sbjct: 1 MGAALGTGTRLAPWPGRACGALPRWTPTAPAQGCHSKPGPARPVPLKKRGYDVTRNPHLN 60
Query: 316 KGMAFTLEERLQLGIHGLIPPCFLSQDVQLLRIMRYYERQQSDLDKYIILMTLQDRNEKL 495
KGMAFTLEERLQLGIHGLIPPCFLSQDVQLLRIMRYYERQQSDLDKYIILMTLQDRNEKL
Sbjct: 61 KGMAFTLEERLQLGIHGLIPPCFLSQDVQLLRIMRYYERQQSDLDKYIILMTLQDRNEKL 120
Query: 496 FYRVLTSDVEKFMPIVYTPTVGLACQHYGLTFRRPRGLFITIHDKGHLPTMLNSWPEDDI 675
FYRVLTSDVEKFMPIVYTPTVGLACQHYGLTFRRPRGLFITIHDKGHL TMLNSWPED+I
Sbjct: 121 FYRVLTSDVEKFMPIVYTPTVGLACQHYGLTFRRPRGLFITIHDKGHLATMLNSWPEDNI 180
Query: 676 KAVVVTDGERILGLGDLGCYGMGIPVGKLALYTACGGVNPRQCLPVLLDVGTNNEELLRD 855
KAVVVTDGERILGLGDLGCYGMGIPVGKLALYTACGGVNP+QCLPVLLDVGTNNEELLRD
Sbjct: 181 KAVVVTDGERILGLGDLGCYGMGIPVGKLALYTACGGVNPQQCLPVLLDVGTNNEELLRD 240
Query: 856 PLYIGLKHRRVRGQDYDDLLDEFMQAVTDKFGINCLIQFEDFANANAFRLLNKYRNKYCM 1035
PLYIGLKH+RV G+ YDDLLDEFMQAVTDKFGINCLIQFEDFANANAFRLLNKYRNKYCM
Sbjct: 241 PLYIGLKHQRVHGKAYDDLLDEFMQAVTDKFGINCLIQFEDFANANAFRLLNKYRNKYCM 300
Query: 1036 FNDDIQGTASVAVAGILAALRITKNKLSNHVFVFQGAGEAAMGIAHLLVMALEKEGVPKA 1215
FNDDIQGTASVAVAGILAALRITKNKLSNHVFVFQGAGEAAMGIAHLLVMALEKEGVPKA
Sbjct: 301 FNDDIQGTASVAVAGILAALRITKNKLSNHVFVFQGAGEAAMGIAHLLVMALEKEGVPKA 360
Query: 1216 EATRKIWMVDSRGLIVKGRSHLNHEKEMFAQDHPXXXXXXXXXXXXKPTXXXXXXXXXXX 1395
EATRKIWMVDS+GLIVKGRSHLNHEKEMFAQDHP KPT
Sbjct: 361 EATRKIWMVDSKGLIVKGRSHLNHEKEMFAQDHPEVNSLEEVVRLVKPTAIIGVAAIAGA 420
Query: 1396 FTEQILRDMASFHERPIIFALSNPTSKAECTAEKCYRVTEGRGIFASGSPFKSVTLEDGR 1575
FTEQILRDMASFHERPIIFALSNPTSKAECTAEKCYRVTEGRGIFASGSPFKSVTLEDG+
Sbjct: 421 FTEQILRDMASFHERPIIFALSNPTSKAECTAEKCYRVTEGRGIFASGSPFKSVTLEDGK 480
Query: 1576 TFIPGQGNNAYVFPGVALGVIAGGIRHIPDEIFLLTAEQIAQEVSEQHLSQGRLYPPLST 1755
TFIPGQGNNAYVFPGVALGVIAGGIRHIPDEIFLLTAEQIAQEVSEQHLSQGRLYPPLST
Sbjct: 481 TFIPGQGNNAYVFPGVALGVIAGGIRHIPDEIFLLTAEQIAQEVSEQHLSQGRLYPPLST 540
Query: 1756 IRDVSLRIAIKVLDYAYKHNLASYYPEPKDKEAFVRSLVYTPDYDSFTLDSYTWPKEAMN 1935
IRDVSLRIAIKVLDYAYKHNLASYYPEPKDKEAFVRSLVYTPDYDSFTLDSYTWPKEAMN
Sbjct: 541 IRDVSLRIAIKVLDYAYKHNLASYYPEPKDKEAFVRSLVYTPDYDSFTLDSYTWPKEAMN 600
Query: 1936 VQNV 1947
VQ V
Sbjct: 601 VQTV 604
>ref|NP_002386.1| NADP-dependent malic enzyme [Homo sapiens].
Length = 572
Score = 816 bits (2109), Expect = 0.0
Identities = 391/562 (69%), Positives = 468/562 (83%)
Frame = +1
Query: 256 PRPVPLKKRGYDVTRNPHLNKGMAFTLEERLQLGIHGLIPPCFLSQDVQLLRIMRYYERQ 435
PR +RGY +TRNPHLNK +AFTLEER QL IHGL+PP F SQ++Q+LR+++ +E
Sbjct: 6 PRRRHTHQRGYLLTRNPHLNKDLAFTLEERQQLNIHGLLPPSFNSQEIQVLRVVKNFEHL 65
Query: 436 QSDLDKYIILMTLQDRNEKLFYRVLTSDVEKFMPIVYTPTVGLACQHYGLTFRRPRGLFI 615
SD D+Y++LM LQDRNEKLFYRVLTSD+EKFMPIVYTPTVGLACQ Y L FR+PRGLFI
Sbjct: 66 NSDFDRYLLLMDLQDRNEKLFYRVLTSDIEKFMPIVYTPTVGLACQQYSLVFRKPRGLFI 125
Query: 616 TIHDKGHLPTMLNSWPEDDIKAVVVTDGERILGLGDLGCYGMGIPVGKLALYTACGGVNP 795
TIHD+GH+ ++LN+WPED IKA+VVTDGERILGLGDLGC GMGIPVGKLALYTACGG+NP
Sbjct: 126 TIHDRGHIASVLNAWPEDVIKAIVVTDGERILGLGDLGCNGMGIPVGKLALYTACGGMNP 185
Query: 796 RQCLPVLLDVGTNNEELLRDPLYIGLKHRRVRGQDYDDLLDEFMQAVTDKFGINCLIQFE 975
++CLPV+LDVGT NEELL+DPLYIGL+ RRVRG +YDD LDEFM+AV+ K+G+NCLIQFE
Sbjct: 186 QECLPVILDVGTENEELLKDPLYIGLRQRRVRGSEYDDFLDEFMEAVSSKYGMNCLIQFE 245
Query: 976 DFANANAFRLLNKYRNKYCMFNDDIQGTASVAVAGILAALRITKNKLSNHVFVFQGAGEA 1155
DFAN NAFRLLNKYRN+YC FNDDIQGTASVAVAG+LAALRITKNKLS+ +FQGAGEA
Sbjct: 246 DFANVNAFRLLNKYRNQYCTFNDDIQGTASVAVAGLLAALRITKNKLSDQTILFQGAGEA 305
Query: 1156 AMGIAHLLVMALEKEGVPKAEATRKIWMVDSRGLIVKGRSHLNHEKEMFAQDHPXXXXXX 1335
A+GIAHL+VMALEKEG+PK +A +KIW+VDS+GLIVKGR+ L EKE FA +H
Sbjct: 306 ALGIAHLIVMALEKEGLPKEKAIKKIWLVDSKGLIVKGRASLTQEKEKFAHEHEEMKNLE 365
Query: 1336 XXXXXXKPTXXXXXXXXXXXFTEQILRDMASFHERPIIFALSNPTSKAECTAEKCYRVTE 1515
KPT F+EQIL+DMA+F+ERPIIFALSNPTSKAEC+AE+CY++T+
Sbjct: 366 AIVQEIKPTALIGVAAIGGAFSEQILKDMAAFNERPIIFALSNPTSKAECSAEQCYKITK 425
Query: 1516 GRGIFASGSPFKSVTLEDGRTFIPGQGNNAYVFPGVALGVIAGGIRHIPDEIFLLTAEQI 1695
GR IFASGSPF VTL +G+T PGQGNN+YVFPGVALGV+A G+R I D IFL TAE I
Sbjct: 426 GRAIFASGSPFDPVTLPNGQTLYPGQGNNSYVFPGVALGVVACGLRQITDNIFLTTAEVI 485
Query: 1696 AQEVSEQHLSQGRLYPPLSTIRDVSLRIAIKVLDYAYKHNLASYYPEPKDKEAFVRSLVY 1875
AQ+VS++HL +GRLYPPL+TIRDVSL+IA K++ AY+ A+ YPEP++KEAFVRS +Y
Sbjct: 486 AQQVSDKHLEEGRLYPPLNTIRDVSLKIAEKIVKDAYQEKTATVYPEPQNKEAFVRSQMY 545
Query: 1876 TPDYDSFTLDSYTWPKEAMNVQ 1941
+ DYD D Y+WP+E +Q
Sbjct: 546 STDYDQILPDCYSWPEEVQKIQ 567
>ref|NP_002387.1| NAD-dependent malic enzyme, mitochondrial isoform 1 precursor [Homo
sapiens].
Length = 584
Score = 637 bits (1643), Expect = 0.0
Identities = 309/560 (55%), Positives = 404/560 (72%), Gaps = 3/560 (0%)
Frame = +1
Query: 259 RPVPLKKRGYDVTRNPHLNKGMAFTLEERLQLGIHGLIPPCFLSQDVQLLRIMRYYERQQ 438
R + +K++G + NP NKGMAFTL+ER LG+ GL+PP +QD+Q LR R ++
Sbjct: 17 RHLHIKEKGKPLMLNPRTNKGMAFTLQERQMLGLQGLLPPKIETQDIQALRFHRNLKKMT 76
Query: 439 SDLDKYIILMTLQDRNEKLFYRVLTSDVEKFMPIVYTPTVGLACQHYGLTFRRPRGLFIT 618
S L+KYI +M +Q+RNEKLFYR+L D+E MPIVYTPTVGLAC YG FRRP+GLFI+
Sbjct: 77 SPLEKYIYIMGIQERNEKLFYRILQDDIESLMPIVYTPTVGLACSQYGHIFRRPKGLFIS 136
Query: 619 IHDKGHLPTMLNSWPEDDIKAVVVTDGERILGLGDLGCYGMGIPVGKLALYTACGGVNPR 798
I D+GH+ +++++WPE+ +KAVVVTDGERILGLGDLG YGMGIPVGKL LYTAC G+ P
Sbjct: 137 ISDRGHVRSIVDNWPENHVKAVVVTDGERILGLGDLGVYGMGIPVGKLCLYTACAGIRPD 196
Query: 799 QCLPVLLDVGTNNEELLRDPLYIGLKHRRVRGQDYDDLLDEFMQAVTDKFGINCLIQFED 978
+CLPV +DVGT+N LL+DP Y+GL +R R Q YDDL+DEFM+A+TD++G N LIQFED
Sbjct: 197 RCLPVCIDVGTDNIALLKDPFYMGLYQKRDRTQQYDDLIDEFMKAITDRYGRNTLIQFED 256
Query: 979 FANANAFRLLNKYRNKYCMFNDDIQGTASVAVAGILAALRITKNKLSNHVFVFQGAGEAA 1158
F N NAFR L KYR KYC FNDDIQGTA+VA+AG+LAA ++ +S H +F GAGEAA
Sbjct: 257 FGNHNAFRFLRKYREKYCTFNDDIQGTAAVALAGLLAAQKVISKPISEHKILFLGAGEAA 316
Query: 1159 MGIAHLLVMALEKEGVPKAEATRKIWMVDSRGLIVKGR-SHLNHEKEMFAQDHP--XXXX 1329
+GIA+L+VM++ + G+ + EA +KIWM D GL+VKGR + ++ +E F P
Sbjct: 317 LGIANLIVMSMVENGLSEQEAQKKIWMFDKYGLLVKGRKAKIDSYQEPFTHSAPESIPDT 376
Query: 1330 XXXXXXXXKPTXXXXXXXXXXXFTEQILRDMASFHERPIIFALSNPTSKAECTAEKCYRV 1509
KP+ FT ++R MAS +ERP+IFALSNPT++AECTAE+ Y +
Sbjct: 377 FEDAVNILKPSTIIGVAGAGRLFTPDVIRAMASINERPVIFALSNPTAQAECTAEEAYTL 436
Query: 1510 TEGRGIFASGSPFKSVTLEDGRTFIPGQGNNAYVFPGVALGVIAGGIRHIPDEIFLLTAE 1689
TEGR +FASGSPF V L DGR F PGQGNN Y+FPGVAL VI RHI D +FL A+
Sbjct: 437 TEGRCLFASGSPFGPVKLTDGRVFTPGQGNNVYIFPGVALAVILCNTRHISDSVFLEAAK 496
Query: 1690 QIAQEVSEQHLSQGRLYPPLSTIRDVSLRIAIKVLDYAYKHNLASYYPEPKDKEAFVRSL 1869
+ +++++ L+QGRLYPPL+ I++VS+ IAIKV +Y Y + +A YPEP+DK +V+
Sbjct: 497 ALTSQLTDEELAQGRLYPPLANIQEVSINIAIKVTEYLYANKMAFRYPEPEDKAKYVKER 556
Query: 1870 VYTPDYDSFTLDSYTWPKEA 1929
+ +YDS D Y WP+ A
Sbjct: 557 TWRSEYDSLLPDVYEWPESA 576
>ref|NP_001161807.1| NAD-dependent malic enzyme, mitochondrial isoform 2 precursor [Homo
sapiens].
Length = 479
Score = 538 bits (1387), Expect = e-153
Identities = 262/462 (56%), Positives = 337/462 (72%), Gaps = 3/462 (0%)
Frame = +1
Query: 259 RPVPLKKRGYDVTRNPHLNKGMAFTLEERLQLGIHGLIPPCFLSQDVQLLRIMRYYERQQ 438
R + +K++G + NP NKGMAFTL+ER LG+ GL+PP +QD+Q LR R ++
Sbjct: 17 RHLHIKEKGKPLMLNPRTNKGMAFTLQERQMLGLQGLLPPKIETQDIQALRFHRNLKKMT 76
Query: 439 SDLDKYIILMTLQDRNEKLFYRVLTSDVEKFMPIVYTPTVGLACQHYGLTFRRPRGLFIT 618
S L+KYI +M +Q+RNEKLFYR+L D+E MPIVYTPTVGLAC YG FRRP+GLFI+
Sbjct: 77 SPLEKYIYIMGIQERNEKLFYRILQDDIESLMPIVYTPTVGLACSQYGHIFRRPKGLFIS 136
Query: 619 IHDKGHLPTMLNSWPEDDIKAVVVTDGERILGLGDLGCYGMGIPVGKLALYTACGGVNPR 798
I D+GH+ +++++WPE+ +KAVVVTDGERILGLGDLG YGMGIPVGKL LYTAC G+ P
Sbjct: 137 ISDRGHVRSIVDNWPENHVKAVVVTDGERILGLGDLGVYGMGIPVGKLCLYTACAGIRPD 196
Query: 799 QCLPVLLDVGTNNEELLRDPLYIGLKHRRVRGQDYDDLLDEFMQAVTDKFGINCLIQFED 978
+CLPV +DVGT+N LL+DP Y+GL +R R Q YDDL+DEFM+A+TD++G N LIQFED
Sbjct: 197 RCLPVCIDVGTDNIALLKDPFYMGLYQKRDRTQQYDDLIDEFMKAITDRYGRNTLIQFED 256
Query: 979 FANANAFRLLNKYRNKYCMFNDDIQGTASVAVAGILAALRITKNKLSNHVFVFQGAGEAA 1158
F N NAFR L KYR KYC FNDDIQGTA+VA+AG+LAA ++ +S H +F GAGEAA
Sbjct: 257 FGNHNAFRFLRKYREKYCTFNDDIQGTAAVALAGLLAAQKVISKPISEHKILFLGAGEAA 316
Query: 1159 MGIAHLLVMALEKEGVPKAEATRKIWMVDSRGLIVKGR-SHLNHEKEMFAQDHP--XXXX 1329
+GIA+L+VM++ + G+ + EA +KIWM D GL+VKGR + ++ +E F P
Sbjct: 317 LGIANLIVMSMVENGLSEQEAQKKIWMFDKYGLLVKGRKAKIDSYQEPFTHSAPESIPDT 376
Query: 1330 XXXXXXXXKPTXXXXXXXXXXXFTEQILRDMASFHERPIIFALSNPTSKAECTAEKCYRV 1509
KP+ FT ++R MAS +ERP+IFALSNPT++AECTAE+ Y +
Sbjct: 377 FEDAVNILKPSTIIGVAGAGRLFTPDVIRAMASINERPVIFALSNPTAQAECTAEEAYTL 436
Query: 1510 TEGRGIFASGSPFKSVTLEDGRTFIPGQGNNAYVFPGVALGV 1635
TEGR +FASGSPF V L DGR F PGQGNN Y+FPG + +
Sbjct: 437 TEGRCLFASGSPFGPVKLTDGRVFTPGQGNNVYIFPGYRIPI 478
Database: RefSeq49_HP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,297,164
Number of sequences in database: 32,964
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 32964
Number of Hits to DB: 80,794,653
Number of extensions: 2325191
Number of successful extensions: 10520
Number of sequences better than 1.0e-05: 6
Number of HSP's gapped: 10391
Number of HSP's successfully gapped: 6
Length of query: 680
Length of database: 18,297,164
Length adjustment: 109
Effective length of query: 571
Effective length of database: 14,704,088
Effective search space: 8396034248
Effective search space used: 8396034248
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Animal-Genome cDNA HTMT1_0093_E12
Search to RefSeqCP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= HTMT1_0093_E12
(2042 letters)
Database: RefSeq49_CP.fasta
33,336 sequences; 18,874,504 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_848770.1| PREDICTED: similar to malic enzyme 3, NADP(+)-d... 1096 0.0
Alignment gi|XP_542269.2| PREDICTED: similar to malic enzyme 3, NADP(+)-d... 1009 0.0
Alignment gi|XP_857227.1| PREDICTED: similar to malic enzyme 3, NADP(+)-d... 1006 0.0
Alignment gi|XP_857135.1| PREDICTED: similar to malic enzyme 3, NADP(+)-d... 1003 0.0
Alignment gi|XP_857177.1| PREDICTED: similar to malic enzyme 3, NADP(+)-d... 959 0.0
Alignment gi|XP_532217.2| PREDICTED: similar to NADP-dependent malic enzy... 790 0.0
Alignment gi|XP_857051.1| PREDICTED: similar to malic enzyme 3, NADP(+)-d... 662 0.0
Alignment gi|XP_849530.1| PREDICTED: similar to NAD-dependent malic enzym... 637 0.0
Alignment gi|XP_533402.2| PREDICTED: similar to NAD-dependent malic enzym... 575 e-164
Alignment gi|XP_857091.1| PREDICTED: similar to NADP-dependent malic enzy... 406 e-113
>ref|XP_848770.1| PREDICTED: similar to malic enzyme 3, NADP(+)-dependent,
mitochondrial isoform 2 [Canis familiaris].
Length = 604
Score = 1096 bits (2835), Expect = 0.0
Identities = 548/604 (90%), Positives = 558/604 (92%)
Frame = +1
Query: 136 MGASLGSGARVALLPRQACGAVXXXXXXXXXXGCHSKTGLPRPVPLKKRGYDVTRNPHLN 315
MGA+LG GAR LL +A GAV GC S+ G RPVPLKKRGYDVTRNPHLN
Sbjct: 1 MGAALGRGARPGLLRGKAWGAVPRWTPSAPGRGCRSRAGPARPVPLKKRGYDVTRNPHLN 60
Query: 316 KGMAFTLEERLQLGIHGLIPPCFLSQDVQLLRIMRYYERQQSDLDKYIILMTLQDRNEKL 495
KGMAFTLEERLQLGIHGLIPPCFLSQDVQLLRIMRYYERQQSDLDKYIILMTLQDRNEKL
Sbjct: 61 KGMAFTLEERLQLGIHGLIPPCFLSQDVQLLRIMRYYERQQSDLDKYIILMTLQDRNEKL 120
Query: 496 FYRVLTSDVEKFMPIVYTPTVGLACQHYGLTFRRPRGLFITIHDKGHLPTMLNSWPEDDI 675
FYRVLTSDVEKFMPIVYTPTVGLACQ YGLTFRRPRGLFITIHDKGHL TMLNSWPEDDI
Sbjct: 121 FYRVLTSDVEKFMPIVYTPTVGLACQQYGLTFRRPRGLFITIHDKGHLATMLNSWPEDDI 180
Query: 676 KAVVVTDGERILGLGDLGCYGMGIPVGKLALYTACGGVNPRQCLPVLLDVGTNNEELLRD 855
KAVVVTDGERILGLGDLGCYGMGIPVGKLALYTACGGV+P+QCLPVLLDVGTNNEELLRD
Sbjct: 181 KAVVVTDGERILGLGDLGCYGMGIPVGKLALYTACGGVSPQQCLPVLLDVGTNNEELLRD 240
Query: 856 PLYIGLKHRRVRGQDYDDLLDEFMQAVTDKFGINCLIQFEDFANANAFRLLNKYRNKYCM 1035
PLYIGLKH+RVRG++YDDLLDEFMQAVTDKFGINCLIQFEDFANANAFRLLNKYRNKYCM
Sbjct: 241 PLYIGLKHQRVRGKEYDDLLDEFMQAVTDKFGINCLIQFEDFANANAFRLLNKYRNKYCM 300
Query: 1036 FNDDIQGTASVAVAGILAALRITKNKLSNHVFVFQGAGEAAMGIAHLLVMALEKEGVPKA 1215
FNDDIQGTASVAVAGILAALRITKNKLSNHVFVFQGAGEAAMGIAHLLVMALEKEGVPKA
Sbjct: 301 FNDDIQGTASVAVAGILAALRITKNKLSNHVFVFQGAGEAAMGIAHLLVMALEKEGVPKA 360
Query: 1216 EATRKIWMVDSRGLIVKGRSHLNHEKEMFAQDHPXXXXXXXXXXXXKPTXXXXXXXXXXX 1395
EATRKIWMVDS+GLIVKGRSHLNHEKEMFAQDHP KPT
Sbjct: 361 EATRKIWMVDSKGLIVKGRSHLNHEKEMFAQDHPEVKSLEEVVRLVKPTAIIGVAAIAGA 420
Query: 1396 FTEQILRDMASFHERPIIFALSNPTSKAECTAEKCYRVTEGRGIFASGSPFKSVTLEDGR 1575
FTEQILRDMASFHERPIIFALSNPTSKAECTAEKCYRVTEGRGIFASGSPFKSVTLEDGR
Sbjct: 421 FTEQILRDMASFHERPIIFALSNPTSKAECTAEKCYRVTEGRGIFASGSPFKSVTLEDGR 480
Query: 1576 TFIPGQGNNAYVFPGVALGVIAGGIRHIPDEIFLLTAEQIAQEVSEQHLSQGRLYPPLST 1755
TFIPGQGNNAYVFPGVALGVIAGGIRHIPDEIFLLTAEQIAQEVSEQHLSQGRLYPPLST
Sbjct: 481 TFIPGQGNNAYVFPGVALGVIAGGIRHIPDEIFLLTAEQIAQEVSEQHLSQGRLYPPLST 540
Query: 1756 IRDVSLRIAIKVLDYAYKHNLASYYPEPKDKEAFVRSLVYTPDYDSFTLDSYTWPKEAMN 1935
IRDVSLRIAIKVLD+AYKHNLASYYPEPKDKEAFVRSLVYTPDYDSFTLDSYTWPKEAMN
Sbjct: 541 IRDVSLRIAIKVLDFAYKHNLASYYPEPKDKEAFVRSLVYTPDYDSFTLDSYTWPKEAMN 600
Query: 1936 VQNV 1947
VQ V
Sbjct: 601 VQTV 604
>ref|XP_542269.2| PREDICTED: similar to malic enzyme 3, NADP(+)-dependent,
mitochondrial isoform 1 [Canis familiaris].
Length = 569
Score = 1009 bits (2608), Expect = 0.0
Identities = 509/569 (89%), Positives = 516/569 (90%), Gaps = 27/569 (4%)
Frame = +1
Query: 322 MAFTLEERLQLGIHGLIPPCFLSQDVQLLRIMRYYERQQSDLDKYIILMTLQDRNEKLFY 501
MAFTLEERLQLGIHGLIPPCFLSQDVQLLRIMRYYERQQSDLDKYIILMTLQDRNEKLFY
Sbjct: 1 MAFTLEERLQLGIHGLIPPCFLSQDVQLLRIMRYYERQQSDLDKYIILMTLQDRNEKLFY 60
Query: 502 RVLTSDVEKFMPIVYTPTVGLACQHYGLTFRRPR-------------------------- 603
RVLTSDVEKFMPIVYTPTVGLACQ YGLTFRRPR
Sbjct: 61 RVLTSDVEKFMPIVYTPTVGLACQQYGLTFRRPRSAKEGLRGESHYGVDSLSSEGLSCSA 120
Query: 604 -GLFITIHDKGHLPTMLNSWPEDDIKAVVVTDGERILGLGDLGCYGMGIPVGKLALYTAC 780
GLFITIHDKGHL TMLNSWPEDDIKAVVVTDGERILGLGDLGCYGMGIPVGKLALYTAC
Sbjct: 121 RGLFITIHDKGHLATMLNSWPEDDIKAVVVTDGERILGLGDLGCYGMGIPVGKLALYTAC 180
Query: 781 GGVNPRQCLPVLLDVGTNNEELLRDPLYIGLKHRRVRGQDYDDLLDEFMQAVTDKFGINC 960
GGV+P+QCLPVLLDVGTNNEELLRDPLYIGLKH+RVRG++YDDLLDEFMQAVTDKFGINC
Sbjct: 181 GGVSPQQCLPVLLDVGTNNEELLRDPLYIGLKHQRVRGKEYDDLLDEFMQAVTDKFGINC 240
Query: 961 LIQFEDFANANAFRLLNKYRNKYCMFNDDIQGTASVAVAGILAALRITKNKLSNHVFVFQ 1140
LIQFEDFANANAFRLLNKYRNKYCMFNDDIQGTASVAVAGILAALRITKNKLSNHVFVFQ
Sbjct: 241 LIQFEDFANANAFRLLNKYRNKYCMFNDDIQGTASVAVAGILAALRITKNKLSNHVFVFQ 300
Query: 1141 GAGEAAMGIAHLLVMALEKEGVPKAEATRKIWMVDSRGLIVKGRSHLNHEKEMFAQDHPX 1320
GAGEAAMGIAHLLVMALEKEGVPKAEATRKIWMVDS+GLIVKGRSHLNHEKEMFAQDHP
Sbjct: 301 GAGEAAMGIAHLLVMALEKEGVPKAEATRKIWMVDSKGLIVKGRSHLNHEKEMFAQDHPE 360
Query: 1321 XXXXXXXXXXXKPTXXXXXXXXXXXFTEQILRDMASFHERPIIFALSNPTSKAECTAEKC 1500
KPT FTEQILRDMASFHERPIIFALSNPTSKAECTAEKC
Sbjct: 361 VKSLEEVVRLVKPTAIIGVAAIAGAFTEQILRDMASFHERPIIFALSNPTSKAECTAEKC 420
Query: 1501 YRVTEGRGIFASGSPFKSVTLEDGRTFIPGQGNNAYVFPGVALGVIAGGIRHIPDEIFLL 1680
YRVTEGRGIFASGSPFKSVTLEDGRTFIPGQGNNAYVFPGVALGVIAGGIRHIPDEIFLL
Sbjct: 421 YRVTEGRGIFASGSPFKSVTLEDGRTFIPGQGNNAYVFPGVALGVIAGGIRHIPDEIFLL 480
Query: 1681 TAEQIAQEVSEQHLSQGRLYPPLSTIRDVSLRIAIKVLDYAYKHNLASYYPEPKDKEAFV 1860
TAEQIAQEVSEQHLSQGRLYPPLSTIRDVSLRIAIKVLD+AYKHNLASYYPEPKDKEAFV
Sbjct: 481 TAEQIAQEVSEQHLSQGRLYPPLSTIRDVSLRIAIKVLDFAYKHNLASYYPEPKDKEAFV 540
Query: 1861 RSLVYTPDYDSFTLDSYTWPKEAMNVQNV 1947
RSLVYTPDYDSFTLDSYTWPKEAMNVQ V
Sbjct: 541 RSLVYTPDYDSFTLDSYTWPKEAMNVQTV 569
>ref|XP_857227.1| PREDICTED: similar to malic enzyme 3, NADP(+)-dependent,
mitochondrial isoform 7 [Canis familiaris].
Length = 562
Score = 1006 bits (2600), Expect = 0.0
Identities = 506/562 (90%), Positives = 514/562 (91%), Gaps = 20/562 (3%)
Frame = +1
Query: 322 MAFTLEERLQLGIHGLIPPCFLSQDVQLLRIMRYYERQQSDLDKYIILMTLQDRNEKLFY 501
MAFTLEERLQLGIHGLIPPCFLSQDVQLLRIMRYYERQQSDLDKYIILMTLQDRNEKLFY
Sbjct: 1 MAFTLEERLQLGIHGLIPPCFLSQDVQLLRIMRYYERQQSDLDKYIILMTLQDRNEKLFY 60
Query: 502 RVLTSDVEKFMPIVYTPTVGLACQHYGLTFRRPRGLFITIHDKGHLPTMLNSWPEDDIKA 681
RVLTSDVEKFMPIVYTPTVGLACQ YGLTFRRPRGLFITIHDKGHL TMLNSWPEDDIKA
Sbjct: 61 RVLTSDVEKFMPIVYTPTVGLACQQYGLTFRRPRGLFITIHDKGHLATMLNSWPEDDIKA 120
Query: 682 VVVTDGERILGLGDLGCYGMGIPVGKLALYTACGGVNPRQCLPVLLDVGTNNEELLRDPL 861
VVVTDGERILGLGDLGCYGMGIPVGKLALYTACGGV+P+QCLPVLLDVGTNNEELLRDPL
Sbjct: 121 VVVTDGERILGLGDLGCYGMGIPVGKLALYTACGGVSPQQCLPVLLDVGTNNEELLRDPL 180
Query: 862 YIGLKHRRVRGQDYDDLLDEFMQAVTDKFGINCLIQFEDFANANAFRLLNKYRNKYCMFN 1041
YIGLKH+RVRG++YDDLLDEFMQAVTDKFGINCLIQFEDFANANAFRLLNKYRNKYCMFN
Sbjct: 181 YIGLKHQRVRGKEYDDLLDEFMQAVTDKFGINCLIQFEDFANANAFRLLNKYRNKYCMFN 240
Query: 1042 DDIQGTASVAVAGILAALRITKNKLSNHVFVFQGAGEAAMGIAHLLVMALEKEGVPKAEA 1221
DDIQGTASVAVAGILAALRITKNKLSNHVFVFQGAGEAAMGIAHLLVMALEKEGVPKAEA
Sbjct: 241 DDIQGTASVAVAGILAALRITKNKLSNHVFVFQGAGEAAMGIAHLLVMALEKEGVPKAEA 300
Query: 1222 TRKIWMVDSRGLIVK--------------------GRSHLNHEKEMFAQDHPXXXXXXXX 1341
TRKIWMVDS+GLIVK + HLNHEKEMFAQDHP
Sbjct: 301 TRKIWMVDSKGLIVKVLSSSYQCLACNECVIMPADPKDHLNHEKEMFAQDHPEVKSLEEV 360
Query: 1342 XXXXKPTXXXXXXXXXXXFTEQILRDMASFHERPIIFALSNPTSKAECTAEKCYRVTEGR 1521
KPT FTEQILRDMASFHERPIIFALSNPTSKAECTAEKCYRVTEGR
Sbjct: 361 VRLVKPTAIIGVAAIAGAFTEQILRDMASFHERPIIFALSNPTSKAECTAEKCYRVTEGR 420
Query: 1522 GIFASGSPFKSVTLEDGRTFIPGQGNNAYVFPGVALGVIAGGIRHIPDEIFLLTAEQIAQ 1701
GIFASGSPFKSVTLEDGRTFIPGQGNNAYVFPGVALGVIAGGIRHIPDEIFLLTAEQIAQ
Sbjct: 421 GIFASGSPFKSVTLEDGRTFIPGQGNNAYVFPGVALGVIAGGIRHIPDEIFLLTAEQIAQ 480
Query: 1702 EVSEQHLSQGRLYPPLSTIRDVSLRIAIKVLDYAYKHNLASYYPEPKDKEAFVRSLVYTP 1881
EVSEQHLSQGRLYPPLSTIRDVSLRIAIKVLD+AYKHNLASYYPEPKDKEAFVRSLVYTP
Sbjct: 481 EVSEQHLSQGRLYPPLSTIRDVSLRIAIKVLDFAYKHNLASYYPEPKDKEAFVRSLVYTP 540
Query: 1882 DYDSFTLDSYTWPKEAMNVQNV 1947
DYDSFTLDSYTWPKEAMNVQ V
Sbjct: 541 DYDSFTLDSYTWPKEAMNVQTV 562
>ref|XP_857135.1| PREDICTED: similar to malic enzyme 3, NADP(+)-dependent,
mitochondrial isoform 5 [Canis familiaris].
Length = 573
Score = 1003 bits (2593), Expect = 0.0
Identities = 509/573 (88%), Positives = 516/573 (90%), Gaps = 31/573 (5%)
Frame = +1
Query: 322 MAFTLEERLQLGIHGLIPPCFLSQDVQLLRIMRYYERQQSDLDKYIILMTLQDRNEKLFY 501
MAFTLEERLQLGIHGLIPPCFLSQDVQLLRIMRYYERQQSDLDKYIILMTLQDRNEKLFY
Sbjct: 1 MAFTLEERLQLGIHGLIPPCFLSQDVQLLRIMRYYERQQSDLDKYIILMTLQDRNEKLFY 60
Query: 502 RVLTSDVEKFMPIVYTPTVGLACQHYGLTFRRPRGLFITIHDKGHLPTMLNSWPEDDIKA 681
RVLTSDVEKFMPIVYTPTVGLACQ YGLTFRRPRGLFITIHDKGHL TMLNSWPEDDIKA
Sbjct: 61 RVLTSDVEKFMPIVYTPTVGLACQQYGLTFRRPRGLFITIHDKGHLATMLNSWPEDDIKA 120
Query: 682 VVVTDGERILGLGDLGCYGMGIPVGKLALYTACGGVNPRQCLPVLLDVGTNNEELLRDPL 861
VVVTDGERILGLGDLGCYGMGIPVGKLALYTACGGV+P+QCLPVLLDVGTNNEELLRDPL
Sbjct: 121 VVVTDGERILGLGDLGCYGMGIPVGKLALYTACGGVSPQQCLPVLLDVGTNNEELLRDPL 180
Query: 862 YIGLKHRRVRGQDYDDLLDEFMQAVTDKFGINCLIQFEDFANANAFRLLNKYRNKYCMFN 1041
YIGLKH+RVRG++YDDLLDEFMQAVTDKFGINCLIQFEDFANANAFRLLNKYRNKYCMFN
Sbjct: 181 YIGLKHQRVRGKEYDDLLDEFMQAVTDKFGINCLIQFEDFANANAFRLLNKYRNKYCMFN 240
Query: 1042 DDIQGTASVAVAGILAALRITKNKLSNHVFVFQGAGEAAMGIAHLLVMALEKEGVPKAEA 1221
DDIQGTASVAVAGILAALRITKNKLSNHVFVFQGAGEAAMGIAHLLVMALEKEGVPKAEA
Sbjct: 241 DDIQGTASVAVAGILAALRITKNKLSNHVFVFQGAGEAAMGIAHLLVMALEKEGVPKAEA 300
Query: 1222 TRKIWMVDSRGLIVK---GRSHLNHEKEMFAQDHPXXXXXXXXXXXXKPTXXXXXXXXXX 1392
TRKIWMVDS+GLIVK GRSHLNHEKEMFAQDHP KPT
Sbjct: 301 TRKIWMVDSKGLIVKVLSGRSHLNHEKEMFAQDHPEVKSLEEVVRLVKPTAIIGVAAIAG 360
Query: 1393 XFTEQILRDMASFHERPIIFALSNPTSKAECTAEKCYRVTE------------------- 1515
FTEQILRDMASFHERPIIFALSNPTSKAECTAEKCYRVTE
Sbjct: 361 AFTEQILRDMASFHERPIIFALSNPTSKAECTAEKCYRVTEVSGESFLPQAERTYPSSYH 420
Query: 1516 ---------GRGIFASGSPFKSVTLEDGRTFIPGQGNNAYVFPGVALGVIAGGIRHIPDE 1668
GRGIFASGSPFKSVTLEDGRTFIPGQGNNAYVFPGVALGVIAGGIRHIPDE
Sbjct: 421 HVILFRVPLGRGIFASGSPFKSVTLEDGRTFIPGQGNNAYVFPGVALGVIAGGIRHIPDE 480
Query: 1669 IFLLTAEQIAQEVSEQHLSQGRLYPPLSTIRDVSLRIAIKVLDYAYKHNLASYYPEPKDK 1848
IFLLTAEQIAQEVSEQHLSQGRLYPPLSTIRDVSLRIAIKVLD+AYKHNLASYYPEPKDK
Sbjct: 481 IFLLTAEQIAQEVSEQHLSQGRLYPPLSTIRDVSLRIAIKVLDFAYKHNLASYYPEPKDK 540
Query: 1849 EAFVRSLVYTPDYDSFTLDSYTWPKEAMNVQNV 1947
EAFVRSLVYTPDYDSFTLDSYTWPKEAMNVQ V
Sbjct: 541 EAFVRSLVYTPDYDSFTLDSYTWPKEAMNVQTV 573
>ref|XP_857177.1| PREDICTED: similar to malic enzyme 3, NADP(+)-dependent,
mitochondrial isoform 6 [Canis familiaris].
Length = 513
Score = 959 bits (2478), Expect = 0.0
Identities = 482/542 (88%), Positives = 491/542 (90%)
Frame = +1
Query: 322 MAFTLEERLQLGIHGLIPPCFLSQDVQLLRIMRYYERQQSDLDKYIILMTLQDRNEKLFY 501
MAFTLEERLQLGIHGLIPPCFLSQDVQLLRIMRYYERQQSDLDKYIILMTLQDRNEKLFY
Sbjct: 1 MAFTLEERLQLGIHGLIPPCFLSQDVQLLRIMRYYERQQSDLDKYIILMTLQDRNEKLFY 60
Query: 502 RVLTSDVEKFMPIVYTPTVGLACQHYGLTFRRPRGLFITIHDKGHLPTMLNSWPEDDIKA 681
RVLTSDVEKFMPIVYTPTVGLACQ YGLTFRRPRGLFITIHDKGHL TMLNSWPEDDIKA
Sbjct: 61 RVLTSDVEKFMPIVYTPTVGLACQQYGLTFRRPRGLFITIHDKGHLATMLNSWPEDDIKA 120
Query: 682 VVVTDGERILGLGDLGCYGMGIPVGKLALYTACGGVNPRQCLPVLLDVGTNNEELLRDPL 861
VVVTDGERILGLGDLGCYGMGIPVGKLALYTACGGV+P+QCLPVLLDVGTNNEELLRDPL
Sbjct: 121 VVVTDGERILGLGDLGCYGMGIPVGKLALYTACGGVSPQQCLPVLLDVGTNNEELLRDPL 180
Query: 862 YIGLKHRRVRGQDYDDLLDEFMQAVTDKFGINCLIQFEDFANANAFRLLNKYRNKYCMFN 1041
YIGLKH+RVRG++YDDLLDEFMQAVTDKFGINCLIQFEDFANANAFRLLNKYRNKYCMFN
Sbjct: 181 YIGLKHQRVRGKEYDDLLDEFMQAVTDKFGINCLIQFEDFANANAFRLLNKYRNKYCMFN 240
Query: 1042 DDIQGTASVAVAGILAALRITKNKLSNHVFVFQGAGEAAMGIAHLLVMALEKEGVPKAEA 1221
DDIQGTASVAVAGILAALRITKNKLSNHVFVFQGAGEAAMGIAHLLVMALEKEGVPKAEA
Sbjct: 241 DDIQGTASVAVAGILAALRITKNKLSNHVFVFQGAGEAAMGIAHLLVMALEKEGVPKAEA 300
Query: 1222 TRKIWMVDSRGLIVKGRSHLNHEKEMFAQDHPXXXXXXXXXXXXKPTXXXXXXXXXXXFT 1401
TRKIWMVDS+GLIVKGRSHLNHEKEMFAQDHP KPT
Sbjct: 301 TRKIWMVDSKGLIVKGRSHLNHEKEMFAQDHPEVKSLEEVVRLVKPTA------------ 348
Query: 1402 EQILRDMASFHERPIIFALSNPTSKAECTAEKCYRVTEGRGIFASGSPFKSVTLEDGRTF 1581
+ +AECTAEKCYRVTEGRGIFASGSPFKSVTLEDGRTF
Sbjct: 349 -----------------IIGRRRQEAECTAEKCYRVTEGRGIFASGSPFKSVTLEDGRTF 391
Query: 1582 IPGQGNNAYVFPGVALGVIAGGIRHIPDEIFLLTAEQIAQEVSEQHLSQGRLYPPLSTIR 1761
IPGQGNNAYVFPGVALGVIAGGIRHIPDEIFLLTAEQIAQEVSEQHLSQGRLYPPLSTIR
Sbjct: 392 IPGQGNNAYVFPGVALGVIAGGIRHIPDEIFLLTAEQIAQEVSEQHLSQGRLYPPLSTIR 451
Query: 1762 DVSLRIAIKVLDYAYKHNLASYYPEPKDKEAFVRSLVYTPDYDSFTLDSYTWPKEAMNVQ 1941
DVSLRIAIKVLD+AYKHNLASYYPEPKDKEAFVRSLVYTPDYDSFTLDSYTWPKEAMNVQ
Sbjct: 452 DVSLRIAIKVLDFAYKHNLASYYPEPKDKEAFVRSLVYTPDYDSFTLDSYTWPKEAMNVQ 511
Query: 1942 NV 1947
V
Sbjct: 512 TV 513
>ref|XP_532217.2| PREDICTED: similar to NADP-dependent malic enzyme (NADP-ME) (Malic
enzyme 1) [Canis familiaris].
Length = 634
Score = 790 bits (2041), Expect = 0.0
Identities = 379/540 (70%), Positives = 450/540 (83%)
Frame = +1
Query: 322 MAFTLEERLQLGIHGLIPPCFLSQDVQLLRIMRYYERQQSDLDKYIILMTLQDRNEKLFY 501
+AFTLEER QL IHGL+PPCF+SQD+Q+LRI++ +ER SD D+Y++LM LQDRNEKLFY
Sbjct: 90 LAFTLEERQQLNIHGLLPPCFISQDIQVLRIIKNFERLTSDFDRYLLLMDLQDRNEKLFY 149
Query: 502 RVLTSDVEKFMPIVYTPTVGLACQHYGLTFRRPRGLFITIHDKGHLPTMLNSWPEDDIKA 681
VL SD+EKFMPIVYTPTVGLACQ Y L FR+PRGLFI+IHD+GH+ ++LN+WPED IKA
Sbjct: 150 SVLMSDLEKFMPIVYTPTVGLACQQYSLAFRKPRGLFISIHDRGHIASVLNAWPEDVIKA 209
Query: 682 VVVTDGERILGLGDLGCYGMGIPVGKLALYTACGGVNPRQCLPVLLDVGTNNEELLRDPL 861
+VVTDGERILGLGDLGC GMGIPVGKLALYTACGG+NP++CLPV+LDVGT NE LL+DPL
Sbjct: 210 IVVTDGERILGLGDLGCNGMGIPVGKLALYTACGGMNPQECLPVILDVGTENEALLKDPL 269
Query: 862 YIGLKHRRVRGQDYDDLLDEFMQAVTDKFGINCLIQFEDFANANAFRLLNKYRNKYCMFN 1041
YIGL+ RRVRG +YDD LDEFM+AV+ K+G+NCLIQFEDFAN NAFRLL KY+N+YC FN
Sbjct: 270 YIGLRQRRVRGPEYDDFLDEFMEAVSSKYGMNCLIQFEDFANINAFRLLKKYQNRYCTFN 329
Query: 1042 DDIQGTASVAVAGILAALRITKNKLSNHVFVFQGAGEAAMGIAHLLVMALEKEGVPKAEA 1221
DDIQGTASVAVAGILAALRITKNKLS+ +FQGAGEAA+GIAHL+VMA+EKEG+PK +A
Sbjct: 330 DDIQGTASVAVAGILAALRITKNKLSDQKILFQGAGEAALGIAHLIVMAMEKEGLPKEKA 389
Query: 1222 TRKIWMVDSRGLIVKGRSHLNHEKEMFAQDHPXXXXXXXXXXXXKPTXXXXXXXXXXXFT 1401
+ IW+VDS+GLIVKGR+ L EKE FA +H KPT F+
Sbjct: 390 MKNIWLVDSKGLIVKGRAALTQEKEQFAHEHEEMKNLEAIVQEIKPTALIGVAAIGGAFS 449
Query: 1402 EQILRDMASFHERPIIFALSNPTSKAECTAEKCYRVTEGRGIFASGSPFKSVTLEDGRTF 1581
EQIL+DMA+F+ERPIIFALSNPTSKAECTAE+CY++T+GR IFASGSPF VTL +GRT
Sbjct: 450 EQILKDMAAFNERPIIFALSNPTSKAECTAEQCYKLTKGRAIFASGSPFDPVTLPNGRTL 509
Query: 1582 IPGQGNNAYVFPGVALGVIAGGIRHIPDEIFLLTAEQIAQEVSEQHLSQGRLYPPLSTIR 1761
PGQGNN+YVFPGVALGV+A G+RHI D IFL TAE IAQ+VS++HL +GRLYPPL TIR
Sbjct: 510 YPGQGNNSYVFPGVALGVVACGLRHITDNIFLTTAEIIAQQVSDKHLEEGRLYPPLDTIR 569
Query: 1762 DVSLRIAIKVLDYAYKHNLASYYPEPKDKEAFVRSLVYTPDYDSFTLDSYTWPKEAMNVQ 1941
DVSL+IA K++ AY+ A+ YPEP +KEAFVRS +Y DYD D Y+WP+EA +Q
Sbjct: 570 DVSLKIAAKIVKDAYQEKTATVYPEPPNKEAFVRSQMYDTDYDQILPDCYSWPEEAQKIQ 629
>ref|XP_857051.1| PREDICTED: similar to malic enzyme 3, NADP(+)-dependent,
mitochondrial isoform 3 [Canis familiaris].
Length = 361
Score = 662 bits (1709), Expect = 0.0
Identities = 327/347 (94%), Positives = 333/347 (95%)
Frame = +1
Query: 322 MAFTLEERLQLGIHGLIPPCFLSQDVQLLRIMRYYERQQSDLDKYIILMTLQDRNEKLFY 501
MAFTLEERLQLGIHGLIPPCFLSQDVQLLRIMRYYERQQSDLDKYIILMTLQDRNEKLFY
Sbjct: 1 MAFTLEERLQLGIHGLIPPCFLSQDVQLLRIMRYYERQQSDLDKYIILMTLQDRNEKLFY 60
Query: 502 RVLTSDVEKFMPIVYTPTVGLACQHYGLTFRRPRGLFITIHDKGHLPTMLNSWPEDDIKA 681
RVLTSDVEKFMPIVYTPTVGLACQ YGLTFRRPRGLFITIHDKGHL TMLNSWPEDDIKA
Sbjct: 61 RVLTSDVEKFMPIVYTPTVGLACQQYGLTFRRPRGLFITIHDKGHLATMLNSWPEDDIKA 120
Query: 682 VVVTDGERILGLGDLGCYGMGIPVGKLALYTACGGVNPRQCLPVLLDVGTNNEELLRDPL 861
VVVTDGERILGLGDLGCYGMGIPVGKLALYTACGGV+P+QCLPVLLDVGTNNEELLRDPL
Sbjct: 121 VVVTDGERILGLGDLGCYGMGIPVGKLALYTACGGVSPQQCLPVLLDVGTNNEELLRDPL 180
Query: 862 YIGLKHRRVRGQDYDDLLDEFMQAVTDKFGINCLIQFEDFANANAFRLLNKYRNKYCMFN 1041
YIGLKH+RVRG++YDDLLDEFMQAVTDKFGINCLIQFEDFANANAFRLLNKYRNKYCMFN
Sbjct: 181 YIGLKHQRVRGKEYDDLLDEFMQAVTDKFGINCLIQFEDFANANAFRLLNKYRNKYCMFN 240
Query: 1042 DDIQGTASVAVAGILAALRITKNKLSNHVFVFQGAGEAAMGIAHLLVMALEKEGVPKAEA 1221
DDIQGTASVAVAGILAALRITKNKLSNHVFVFQGAGEAAMGIAHLLVMALEKEGVPKAEA
Sbjct: 241 DDIQGTASVAVAGILAALRITKNKLSNHVFVFQGAGEAAMGIAHLLVMALEKEGVPKAEA 300
Query: 1222 TRKIWMVDSRGLIVKGRSHLNHEKEMFAQDHPXXXXXXXXXXXXKPT 1362
TRKIWMVDS+GLIVKGRSHLNHEKEMFAQDHP KPT
Sbjct: 301 TRKIWMVDSKGLIVKGRSHLNHEKEMFAQDHPEVKSLEEVVRLVKPT 347
>ref|XP_849530.1| PREDICTED: similar to NAD-dependent malic enzyme, mitochondrial
precursor (NAD-ME) (Malic enzyme 2) isoform 2 [Canis
familiaris].
Length = 584
Score = 637 bits (1642), Expect = 0.0
Identities = 306/562 (54%), Positives = 406/562 (72%), Gaps = 3/562 (0%)
Frame = +1
Query: 259 RPVPLKKRGYDVTRNPHLNKGMAFTLEERLQLGIHGLIPPCFLSQDVQLLRIMRYYERQQ 438
R + +K++G + NP NKGMAFTL+ER LG+ GL+PP +QD+Q LR + ++
Sbjct: 17 RHIHIKEKGKPLMLNPRTNKGMAFTLQERQMLGLQGLLPPKIETQDIQALRFHKNVKKMN 76
Query: 439 SDLDKYIILMTLQDRNEKLFYRVLTSDVEKFMPIVYTPTVGLACQHYGLTFRRPRGLFIT 618
L+KYI +M +Q+RNEKLFYR+L D+E MPIVYTPTVGLAC YG FRRP+GLFI+
Sbjct: 77 GPLEKYIYIMGIQERNEKLFYRILQDDIESLMPIVYTPTVGLACSQYGHIFRRPKGLFIS 136
Query: 619 IHDKGHLPTMLNSWPEDDIKAVVVTDGERILGLGDLGCYGMGIPVGKLALYTACGGVNPR 798
I D+GH+ +++++WPE+ +KAVVVTDGERILGLGDLG YGMGIPVGKL LYTAC G+ P
Sbjct: 137 ISDRGHVRSIVDNWPENHVKAVVVTDGERILGLGDLGVYGMGIPVGKLCLYTACAGIRPD 196
Query: 799 QCLPVLLDVGTNNEELLRDPLYIGLKHRRVRGQDYDDLLDEFMQAVTDKFGINCLIQFED 978
+CLPV +DVGT+N LL+DP Y+GL +R R Q YDDL+DEFM+A+TD++G N LIQFED
Sbjct: 197 RCLPVCIDVGTDNPALLKDPFYMGLYQKRDRSQRYDDLIDEFMKAITDRYGQNTLIQFED 256
Query: 979 FANANAFRLLNKYRNKYCMFNDDIQGTASVAVAGILAALRITKNKLSNHVFVFQGAGEAA 1158
F N NAFR L KYR KYC FNDDIQGTA+VA+AG+LAA ++ S H +F GAGEAA
Sbjct: 257 FGNHNAFRFLRKYREKYCTFNDDIQGTAAVALAGLLAAQKVIGKSFSEHKILFLGAGEAA 316
Query: 1159 MGIAHLLVMALEKEGVPKAEATRKIWMVDSRGLIVKGR-SHLNHEKEMFAQDHP--XXXX 1329
+GIA+L+VMA+ + G+ + EA +KIWMVD GL+ KGR + + + +E FA P
Sbjct: 317 LGIANLIVMAMVENGLSEEEAQKKIWMVDKFGLLFKGRKAKIENHQEPFAHSAPGIIPDT 376
Query: 1330 XXXXXXXXKPTXXXXXXXXXXXFTEQILRDMASFHERPIIFALSNPTSKAECTAEKCYRV 1509
+P+ FT +++ MA +ERP+IFALSNPT+ AECTAE+ Y +
Sbjct: 377 FEDAVNILRPSAIIGVAGAGRLFTPGVIKAMADINERPVIFALSNPTAMAECTAEEAYTL 436
Query: 1510 TEGRGIFASGSPFKSVTLEDGRTFIPGQGNNAYVFPGVALGVIAGGIRHIPDEIFLLTAE 1689
TEGR +FASGSPF+ V L DG+ F PGQGNN Y+FPGVAL VI RHI D +FL A+
Sbjct: 437 TEGRCLFASGSPFEPVKLSDGQLFTPGQGNNVYIFPGVALAVILCNTRHISDHVFLEAAK 496
Query: 1690 QIAQEVSEQHLSQGRLYPPLSTIRDVSLRIAIKVLDYAYKHNLASYYPEPKDKEAFVRSL 1869
+A +++++ L+QGRLYPPL+ I++VS+ IAIKV +Y Y + +A YPEP+DK ++R
Sbjct: 497 ALANQLTDKELAQGRLYPPLADIQEVSINIAIKVTEYLYANKMAFRYPEPEDKAKYIRER 556
Query: 1870 VYTPDYDSFTLDSYTWPKEAMN 1935
++ +YDS D Y WP+ A++
Sbjct: 557 IWRSEYDSLLPDVYDWPESALS 578
>ref|XP_533402.2| PREDICTED: similar to NAD-dependent malic enzyme, mitochondrial
precursor (NAD-ME) (Malic enzyme 2) isoform 1 [Canis
familiaris].
Length = 499
Score = 575 bits (1482), Expect = e-164
Identities = 276/493 (55%), Positives = 361/493 (73%), Gaps = 3/493 (0%)
Frame = +1
Query: 466 MTLQDRNEKLFYRVLTSDVEKFMPIVYTPTVGLACQHYGLTFRRPRGLFITIHDKGHLPT 645
M +Q+RNEKLFYR+L D+E MPIVYTPTVGLAC YG FRRP+GLFI+I D+GH+ +
Sbjct: 1 MGIQERNEKLFYRILQDDIESLMPIVYTPTVGLACSQYGHIFRRPKGLFISISDRGHVRS 60
Query: 646 MLNSWPEDDIKAVVVTDGERILGLGDLGCYGMGIPVGKLALYTACGGVNPRQCLPVLLDV 825
++++WPE+ +KAVVVTDGERILGLGDLG YGMGIPVGKL LYTAC G+ P +CLPV +DV
Sbjct: 61 IVDNWPENHVKAVVVTDGERILGLGDLGVYGMGIPVGKLCLYTACAGIRPDRCLPVCIDV 120
Query: 826 GTNNEELLRDPLYIGLKHRRVRGQDYDDLLDEFMQAVTDKFGINCLIQFEDFANANAFRL 1005
GT+N LL+DP Y+GL +R R Q YDDL+DEFM+A+TD++G N LIQFEDF N NAFR
Sbjct: 121 GTDNPALLKDPFYMGLYQKRDRSQRYDDLIDEFMKAITDRYGQNTLIQFEDFGNHNAFRF 180
Query: 1006 LNKYRNKYCMFNDDIQGTASVAVAGILAALRITKNKLSNHVFVFQGAGEAAMGIAHLLVM 1185
L KYR KYC FNDDIQGTA+VA+AG+LAA ++ S H +F GAGEAA+GIA+L+VM
Sbjct: 181 LRKYREKYCTFNDDIQGTAAVALAGLLAAQKVIGKSFSEHKILFLGAGEAALGIANLIVM 240
Query: 1186 ALEKEGVPKAEATRKIWMVDSRGLIVKGR-SHLNHEKEMFAQDHP--XXXXXXXXXXXXK 1356
A+ + G+ + EA +KIWMVD GL+ KGR + + + +E FA P +
Sbjct: 241 AMVENGLSEEEAQKKIWMVDKFGLLFKGRKAKIENHQEPFAHSAPGIIPDTFEDAVNILR 300
Query: 1357 PTXXXXXXXXXXXFTEQILRDMASFHERPIIFALSNPTSKAECTAEKCYRVTEGRGIFAS 1536
P+ FT +++ MA +ERP+IFALSNPT+ AECTAE+ Y +TEGR +FAS
Sbjct: 301 PSAIIGVAGAGRLFTPGVIKAMADINERPVIFALSNPTAMAECTAEEAYTLTEGRCLFAS 360
Query: 1537 GSPFKSVTLEDGRTFIPGQGNNAYVFPGVALGVIAGGIRHIPDEIFLLTAEQIAQEVSEQ 1716
GSPF+ V L DG+ F PGQGNN Y+FPGVAL VI RHI D +FL A+ +A +++++
Sbjct: 361 GSPFEPVKLSDGQLFTPGQGNNVYIFPGVALAVILCNTRHISDHVFLEAAKALANQLTDK 420
Query: 1717 HLSQGRLYPPLSTIRDVSLRIAIKVLDYAYKHNLASYYPEPKDKEAFVRSLVYTPDYDSF 1896
L+QGRLYPPL+ I++VS+ IAIKV +Y Y + +A YPEP+DK ++R ++ +YDS
Sbjct: 421 ELAQGRLYPPLADIQEVSINIAIKVTEYLYANKMAFRYPEPEDKAKYIRERIWRSEYDSL 480
Query: 1897 TLDSYTWPKEAMN 1935
D Y WP+ A++
Sbjct: 481 LPDVYDWPESALS 493
>ref|XP_857091.1| PREDICTED: similar to NADP-dependent malic enzyme, mitochondrial
precursor (NADP-ME) (Malic enzyme 3) isoform 4 [Canis
familiaris].
Length = 231
Score = 406 bits (1044), Expect = e-113
Identities = 203/228 (89%), Positives = 204/228 (89%)
Frame = +1
Query: 1264 KGRSHLNHEKEMFAQDHPXXXXXXXXXXXXKPTXXXXXXXXXXXFTEQILRDMASFHERP 1443
KGRSHLNHEKEMFAQDHP KPT FTEQILRDMASFHERP
Sbjct: 4 KGRSHLNHEKEMFAQDHPEVKSLEEVVRLVKPTAIIGVAAIAGAFTEQILRDMASFHERP 63
Query: 1444 IIFALSNPTSKAECTAEKCYRVTEGRGIFASGSPFKSVTLEDGRTFIPGQGNNAYVFPGV 1623
IIFALSNPTSKAECTAEKCYRVTEGRGIFASGSPFKSVTLEDGRTFIPGQGNNAYVFPGV
Sbjct: 64 IIFALSNPTSKAECTAEKCYRVTEGRGIFASGSPFKSVTLEDGRTFIPGQGNNAYVFPGV 123
Query: 1624 ALGVIAGGIRHIPDEIFLLTAEQIAQEVSEQHLSQGRLYPPLSTIRDVSLRIAIKVLDYA 1803
ALGVIAGGIRHIPDEIFLLTAEQIAQEVSEQHLSQGRLYPPLSTIRDVSLRIAIKVLD+A
Sbjct: 124 ALGVIAGGIRHIPDEIFLLTAEQIAQEVSEQHLSQGRLYPPLSTIRDVSLRIAIKVLDFA 183
Query: 1804 YKHNLASYYPEPKDKEAFVRSLVYTPDYDSFTLDSYTWPKEAMNVQNV 1947
YKHNLASYYPEPKDKEAFVRSLVYTPDYDSFTLDSYTWPKEAMNVQ V
Sbjct: 184 YKHNLASYYPEPKDKEAFVRSLVYTPDYDSFTLDSYTWPKEAMNVQTV 231
Database: RefSeq49_CP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,874,504
Number of sequences in database: 33,336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33336
Number of Hits to DB: 82,459,490
Number of extensions: 2382764
Number of successful extensions: 10982
Number of sequences better than 1.0e-05: 10
Number of HSP's gapped: 10872
Number of HSP's successfully gapped: 11
Length of query: 680
Length of database: 18,874,504
Length adjustment: 110
Effective length of query: 570
Effective length of database: 15,207,544
Effective search space: 8668300080
Effective search space used: 8668300080
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to RefSeqMP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= HTMT1_0093_E12
(2042 letters)
Database: RefSeq49_MP.fasta
30,036 sequences; 15,617,559 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_852072.2| NADP-dependent malic enzyme, mitochondrial prec... 1092 0.0
Alignment gi|NP_032641.2| NADP-dependent malic enzyme isoform 1 [Mus musc... 813 0.0
Alignment gi|NP_001185862.1| NADP-dependent malic enzyme isoform 2 [Mus m... 790 0.0
Alignment gi|NP_663469.1| NAD-dependent malic enzyme, mitochondrial precu... 629 e-180
Alignment gi|XP_003086141.1| PREDICTED: NAD-dependent malic enzyme, mitoc... 583 e-166
>ref|NP_852072.2| NADP-dependent malic enzyme, mitochondrial precursor [Mus musculus].
Length = 604
Score = 1092 bits (2824), Expect = 0.0
Identities = 535/604 (88%), Positives = 560/604 (92%)
Frame = +1
Query: 136 MGASLGSGARVALLPRQACGAVXXXXXXXXXXGCHSKTGLPRPVPLKKRGYDVTRNPHLN 315
MGA+LG+GAR+ +PR AC ++ GCHSK+G PRPVPLKKRGYDVTRNPHLN
Sbjct: 1 MGAALGTGARLTSVPRIACSSLRRQAPSAPAQGCHSKSGPPRPVPLKKRGYDVTRNPHLN 60
Query: 316 KGMAFTLEERLQLGIHGLIPPCFLSQDVQLLRIMRYYERQQSDLDKYIILMTLQDRNEKL 495
KGMAFTLEERLQLGIHGLIPPCFLSQDVQLLRIMRYYE QQSDLDKYIILMTLQDRNEKL
Sbjct: 61 KGMAFTLEERLQLGIHGLIPPCFLSQDVQLLRIMRYYENQQSDLDKYIILMTLQDRNEKL 120
Query: 496 FYRVLTSDVEKFMPIVYTPTVGLACQHYGLTFRRPRGLFITIHDKGHLPTMLNSWPEDDI 675
FYRVLTSDVEKFMPIVYTPTVGLACQHYGLTFRRPRGLFITIHDKGH+ TMLNSWPED+I
Sbjct: 121 FYRVLTSDVEKFMPIVYTPTVGLACQHYGLTFRRPRGLFITIHDKGHIATMLNSWPEDNI 180
Query: 676 KAVVVTDGERILGLGDLGCYGMGIPVGKLALYTACGGVNPRQCLPVLLDVGTNNEELLRD 855
KAVVVTDGERILGLGDLGCYGMGIPVGKLALYTACGGVNP+QCLPVLLDVGTNNEELLRD
Sbjct: 181 KAVVVTDGERILGLGDLGCYGMGIPVGKLALYTACGGVNPQQCLPVLLDVGTNNEELLRD 240
Query: 856 PLYIGLKHRRVRGQDYDDLLDEFMQAVTDKFGINCLIQFEDFANANAFRLLNKYRNKYCM 1035
PLYIGLKH+RVRG++YDDLLDEFMQAVTDKFGINCLIQFEDFANANAFRLLNKYRNKYCM
Sbjct: 241 PLYIGLKHQRVRGEEYDDLLDEFMQAVTDKFGINCLIQFEDFANANAFRLLNKYRNKYCM 300
Query: 1036 FNDDIQGTASVAVAGILAALRITKNKLSNHVFVFQGAGEAAMGIAHLLVMALEKEGVPKA 1215
FNDDIQGTASVAVAGILAALRITKN+LSNHVFVFQGAGEAAMGIAHLLVMALEKEG+PK
Sbjct: 301 FNDDIQGTASVAVAGILAALRITKNRLSNHVFVFQGAGEAAMGIAHLLVMALEKEGIPKT 360
Query: 1216 EATRKIWMVDSRGLIVKGRSHLNHEKEMFAQDHPXXXXXXXXXXXXKPTXXXXXXXXXXX 1395
EA +KIWMVDS+GLIVKGRSHLNHEKEMFAQDHP KPT
Sbjct: 361 EAIKKIWMVDSKGLIVKGRSHLNHEKEMFAQDHPEVNSLEEVVRLVKPTAIIGVAAIAGA 420
Query: 1396 FTEQILRDMASFHERPIIFALSNPTSKAECTAEKCYRVTEGRGIFASGSPFKSVTLEDGR 1575
FTEQILRDMASFHERPI+FALSNPTSKAECTAEKCYRVTEGRGIFASGSPFKSVTLEDGR
Sbjct: 421 FTEQILRDMASFHERPIVFALSNPTSKAECTAEKCYRVTEGRGIFASGSPFKSVTLEDGR 480
Query: 1576 TFIPGQGNNAYVFPGVALGVIAGGIRHIPDEIFLLTAEQIAQEVSEQHLSQGRLYPPLST 1755
TF PGQGNNAYVFPGVALGVIAGGIRHIPDEIFLLTAEQIAQEVSEQHLSQGRLYPPLST
Sbjct: 481 TFTPGQGNNAYVFPGVALGVIAGGIRHIPDEIFLLTAEQIAQEVSEQHLSQGRLYPPLST 540
Query: 1756 IRDVSLRIAIKVLDYAYKHNLASYYPEPKDKEAFVRSLVYTPDYDSFTLDSYTWPKEAMN 1935
IRDVSLRIA+KVLDYAYKHNLASYYPEPKDKEAFV+SL+YTPDYDSF+LD+Y+WPKEAM+
Sbjct: 541 IRDVSLRIAVKVLDYAYKHNLASYYPEPKDKEAFVKSLIYTPDYDSFSLDTYSWPKEAMS 600
Query: 1936 VQNV 1947
VQ V
Sbjct: 601 VQKV 604
>ref|NP_032641.2| NADP-dependent malic enzyme isoform 1 [Mus musculus].
Length = 572
Score = 813 bits (2100), Expect = 0.0
Identities = 389/562 (69%), Positives = 464/562 (82%)
Frame = +1
Query: 256 PRPVPLKKRGYDVTRNPHLNKGMAFTLEERLQLGIHGLIPPCFLSQDVQLLRIMRYYERQ 435
PR +RGY +TR+PHLNK +AFTLEER QL IHGL+PPC +SQ++Q+LRI++ +ER
Sbjct: 6 PRRRHTHQRGYLLTRDPHLNKDLAFTLEERQQLNIHGLLPPCIISQELQVLRIIKNFERL 65
Query: 436 QSDLDKYIILMTLQDRNEKLFYRVLTSDVEKFMPIVYTPTVGLACQHYGLTFRRPRGLFI 615
SD D+Y++LM LQDRNEKLFY VL SDVEKFMPIVYTPTVGLACQ Y L FR+PRGLFI
Sbjct: 66 NSDFDRYLLLMDLQDRNEKLFYSVLMSDVEKFMPIVYTPTVGLACQQYSLAFRKPRGLFI 125
Query: 616 TIHDKGHLPTMLNSWPEDDIKAVVVTDGERILGLGDLGCYGMGIPVGKLALYTACGGVNP 795
+IHDKGH+ ++LN+WPED +KA+VVTDGERILGLGDLGC GMGIPVGKLALYTACGGVNP
Sbjct: 126 SIHDKGHIASVLNAWPEDVVKAIVVTDGERILGLGDLGCNGMGIPVGKLALYTACGGVNP 185
Query: 796 RQCLPVLLDVGTNNEELLRDPLYIGLKHRRVRGQDYDDLLDEFMQAVTDKFGINCLIQFE 975
+QCLP+ LDVGT NEELL+DPLYIGL+HRRVRG +YD LDEFM+A + K+G+NCLIQFE
Sbjct: 186 QQCLPITLDVGTENEELLKDPLYIGLRHRRVRGPEYDAFLDEFMEAASSKYGMNCLIQFE 245
Query: 976 DFANANAFRLLNKYRNKYCMFNDDIQGTASVAVAGILAALRITKNKLSNHVFVFQGAGEA 1155
DFAN NAFRLLNKYRNKYC FNDDIQGTASVAVAG+LAALRITKNKLS+ +FQGAGEA
Sbjct: 246 DFANRNAFRLLNKYRNKYCTFNDDIQGTASVAVAGLLAALRITKNKLSDQTVLFQGAGEA 305
Query: 1156 AMGIAHLLVMALEKEGVPKAEATRKIWMVDSRGLIVKGRSHLNHEKEMFAQDHPXXXXXX 1335
A+GIAHL+VMA+EKEG+ K A +KIW+VDS+GLIVKGR+ L EKE+FA +H
Sbjct: 306 ALGIAHLVVMAMEKEGLSKENARKKIWLVDSKGLIVKGRASLTEEKEVFAHEHEEMKNLE 365
Query: 1336 XXXXXXKPTXXXXXXXXXXXFTEQILRDMASFHERPIIFALSNPTSKAECTAEKCYRVTE 1515
KPT FTEQIL+DMA+F+ERPIIFALSNPTSKAEC+AE+CY+VT+
Sbjct: 366 AIVQKIKPTALIGVAAIGGAFTEQILKDMAAFNERPIIFALSNPTSKAECSAEQCYKVTK 425
Query: 1516 GRGIFASGSPFKSVTLEDGRTFIPGQGNNAYVFPGVALGVIAGGIRHIPDEIFLLTAEQI 1695
GR IFASGSPF VTL DGRT PGQGNN+YVFPGVALGV+A G+RHI D++FL TAE I
Sbjct: 426 GRAIFASGSPFDPVTLPDGRTLFPGQGNNSYVFPGVALGVVACGLRHIDDKVFLTTAEVI 485
Query: 1696 AQEVSEQHLSQGRLYPPLSTIRDVSLRIAIKVLDYAYKHNLASYYPEPKDKEAFVRSLVY 1875
+Q+VS++HL +GRLYPPL+TIR VSL+IA+K++ AYK +A+ YPEP++KE FV S +Y
Sbjct: 486 SQQVSDKHLQEGRLYPPLNTIRGVSLKIAVKIVQDAYKEKMATVYPEPQNKEEFVSSQMY 545
Query: 1876 TPDYDSFTLDSYTWPKEAMNVQ 1941
+ +YD D Y WP E +Q
Sbjct: 546 STNYDQILPDCYPWPAEVQKIQ 567
>ref|NP_001185862.1| NADP-dependent malic enzyme isoform 2 [Mus musculus].
Length = 552
Score = 790 bits (2041), Expect = 0.0
Identities = 377/540 (69%), Positives = 449/540 (83%)
Frame = +1
Query: 322 MAFTLEERLQLGIHGLIPPCFLSQDVQLLRIMRYYERQQSDLDKYIILMTLQDRNEKLFY 501
+AFTLEER QL IHGL+PPC +SQ++Q+LRI++ +ER SD D+Y++LM LQDRNEKLFY
Sbjct: 8 LAFTLEERQQLNIHGLLPPCIISQELQVLRIIKNFERLNSDFDRYLLLMDLQDRNEKLFY 67
Query: 502 RVLTSDVEKFMPIVYTPTVGLACQHYGLTFRRPRGLFITIHDKGHLPTMLNSWPEDDIKA 681
VL SDVEKFMPIVYTPTVGLACQ Y L FR+PRGLFI+IHDKGH+ ++LN+WPED +KA
Sbjct: 68 SVLMSDVEKFMPIVYTPTVGLACQQYSLAFRKPRGLFISIHDKGHIASVLNAWPEDVVKA 127
Query: 682 VVVTDGERILGLGDLGCYGMGIPVGKLALYTACGGVNPRQCLPVLLDVGTNNEELLRDPL 861
+VVTDGERILGLGDLGC GMGIPVGKLALYTACGGVNP+QCLP+ LDVGT NEELL+DPL
Sbjct: 128 IVVTDGERILGLGDLGCNGMGIPVGKLALYTACGGVNPQQCLPITLDVGTENEELLKDPL 187
Query: 862 YIGLKHRRVRGQDYDDLLDEFMQAVTDKFGINCLIQFEDFANANAFRLLNKYRNKYCMFN 1041
YIGL+HRRVRG +YD LDEFM+A + K+G+NCLIQFEDFAN NAFRLLNKYRNKYC FN
Sbjct: 188 YIGLRHRRVRGPEYDAFLDEFMEAASSKYGMNCLIQFEDFANRNAFRLLNKYRNKYCTFN 247
Query: 1042 DDIQGTASVAVAGILAALRITKNKLSNHVFVFQGAGEAAMGIAHLLVMALEKEGVPKAEA 1221
DDIQGTASVAVAG+LAALRITKNKLS+ +FQGAGEAA+GIAHL+VMA+EKEG+ K A
Sbjct: 248 DDIQGTASVAVAGLLAALRITKNKLSDQTVLFQGAGEAALGIAHLVVMAMEKEGLSKENA 307
Query: 1222 TRKIWMVDSRGLIVKGRSHLNHEKEMFAQDHPXXXXXXXXXXXXKPTXXXXXXXXXXXFT 1401
+KIW+VDS+GLIVKGR+ L EKE+FA +H KPT FT
Sbjct: 308 RKKIWLVDSKGLIVKGRASLTEEKEVFAHEHEEMKNLEAIVQKIKPTALIGVAAIGGAFT 367
Query: 1402 EQILRDMASFHERPIIFALSNPTSKAECTAEKCYRVTEGRGIFASGSPFKSVTLEDGRTF 1581
EQIL+DMA+F+ERPIIFALSNPTSKAEC+AE+CY+VT+GR IFASGSPF VTL DGRT
Sbjct: 368 EQILKDMAAFNERPIIFALSNPTSKAECSAEQCYKVTKGRAIFASGSPFDPVTLPDGRTL 427
Query: 1582 IPGQGNNAYVFPGVALGVIAGGIRHIPDEIFLLTAEQIAQEVSEQHLSQGRLYPPLSTIR 1761
PGQGNN+YVFPGVALGV+A G+RHI D++FL TAE I+Q+VS++HL +GRLYPPL+TIR
Sbjct: 428 FPGQGNNSYVFPGVALGVVACGLRHIDDKVFLTTAEVISQQVSDKHLQEGRLYPPLNTIR 487
Query: 1762 DVSLRIAIKVLDYAYKHNLASYYPEPKDKEAFVRSLVYTPDYDSFTLDSYTWPKEAMNVQ 1941
VSL+IA+K++ AYK +A+ YPEP++KE FV S +Y+ +YD D Y WP E +Q
Sbjct: 488 GVSLKIAVKIVQDAYKEKMATVYPEPQNKEEFVSSQMYSTNYDQILPDCYPWPAEVQKIQ 547
>ref|NP_663469.1| NAD-dependent malic enzyme, mitochondrial precursor [Mus musculus].
Length = 589
Score = 629 bits (1622), Expect = e-180
Identities = 308/561 (54%), Positives = 401/561 (71%), Gaps = 3/561 (0%)
Frame = +1
Query: 259 RPVPLKKRGYDVTRNPHLNKGMAFTLEERLQLGIHGLIPPCFLSQDVQLLRIMRYYERQQ 438
R V LK++G + NP NKGMAFTL+ER LG+ GL+PP +QD+Q LR R ++
Sbjct: 17 RRVHLKEKGKPLMLNPRTNKGMAFTLQERQMLGLQGLLPPKIETQDIQALRFHRNLKKMT 76
Query: 439 SDLDKYIILMTLQDRNEKLFYRVLTSDVEKFMPIVYTPTVGLACQHYGLTFRRPRGLFIT 618
S L+KYI +M +Q+RNEKLFYR+L D+E MPIVYTPTVGLAC YG FRRP+GLFI+
Sbjct: 77 SPLEKYIYIMGIQERNEKLFYRILQDDIESLMPIVYTPTVGLACCQYGHIFRRPKGLFIS 136
Query: 619 IHDKGHLPTMLNSWPEDDIKAVVVTDGERILGLGDLGCYGMGIPVGKLALYTACGGVNPR 798
I D+GH+ +++++WPE+ +KAVVVTDGERILGLGDLG YGMGIPVGKL LYTAC G+ P
Sbjct: 137 ISDRGHVRSIVDNWPENHVKAVVVTDGERILGLGDLGVYGMGIPVGKLCLYTACAGIQPE 196
Query: 799 QCLPVLLDVGTNNEELLRDPLYIGLKHRRVRGQDYDDLLDEFMQAVTDKFGINCLIQFED 978
+CLPV +DVGT+N LL+DP Y+GL +R R Q YDDL+DEFM+A+TD++G N LIQFED
Sbjct: 197 KCLPVCIDVGTDNMALLKDPFYMGLYQKRDRSQLYDDLMDEFMKAITDRYGRNTLIQFED 256
Query: 979 FANANAFRLLNKYRNKYCMFNDDIQGTASVAVAGILAALRITKNKLSNHVFVFQGAGEAA 1158
F N NAFR L KY+ KYC FNDDIQGTA+VA++G+LAA R+ +S H +F GAGEAA
Sbjct: 257 FGNHNAFRFLRKYQQKYCTFNDDIQGTAAVALSGLLAAQRVINKPVSEHKILFLGAGEAA 316
Query: 1159 MGIAHLLVMALEKEGVPKAEATRKIWMVDSRGLIVKGRS---HLNHEKEMFAQDHPXXXX 1329
+GIA+L+V+++ + G+ + EA RKIWM D GL+VKGR+ N E A
Sbjct: 317 LGIANLIVLSMVESGLSEEEAQRKIWMFDKSGLLVKGRTASIDSNQEPYAHAAPESIPAT 376
Query: 1330 XXXXXXXXKPTXXXXXXXXXXXFTEQILRDMASFHERPIIFALSNPTSKAECTAEKCYRV 1509
KP+ FT +++ MAS +ERPIIFALSNPT++AECTAE Y +
Sbjct: 377 FEDAVNKLKPSVIIGVAGAGPLFTHGVIKAMASINERPIIFALSNPTAQAECTAEDAYTL 436
Query: 1510 TEGRGIFASGSPFKSVTLEDGRTFIPGQGNNAYVFPGVALGVIAGGIRHIPDEIFLLTAE 1689
TEGR +FASGSPF+ V L+DGR F PGQGNNAY+FPGVAL VI RHI D +FL A+
Sbjct: 437 TEGRCLFASGSPFEPVKLQDGRVFTPGQGNNAYIFPGVALAVILCEARHISDTVFLEAAK 496
Query: 1690 QIAQEVSEQHLSQGRLYPPLSTIRDVSLRIAIKVLDYAYKHNLASYYPEPKDKEAFVRSL 1869
+ ++++ L+QGRLYP L+ I++VS IAIK+ +Y Y + +A YPEP+DK +VR
Sbjct: 497 ALTTQLTDAELAQGRLYPSLANIQEVSANIAIKLAEYLYANKMAFRYPEPEDKARYVRER 556
Query: 1870 VYTPDYDSFTLDSYTWPKEAM 1932
++ +Y S D Y WP+ ++
Sbjct: 557 IWRSNYVSLLPDVYDWPESSL 577
>ref|XP_003086141.1| PREDICTED: NAD-dependent malic enzyme, mitochondrial-like [Mus
musculus].
Length = 563
Score = 583 bits (1502), Expect = e-166
Identities = 293/561 (52%), Positives = 380/561 (67%), Gaps = 3/561 (0%)
Frame = +1
Query: 259 RPVPLKKRGYDVTRNPHLNKGMAFTLEERLQLGIHGLIPPCFLSQDVQLLRIMRYYERQQ 438
R V LK++G + NP NKGMAFTL+ER LG+ GL+PP +QD+Q LR R ++
Sbjct: 17 RRVHLKEKGKPLMLNPRTNKGMAFTLQERQMLGLQGLLPPKIETQDIQALRFHRNLKKMT 76
Query: 439 SDLDKYIILMTLQDRNEKLFYRVLTSDVEKFMPIVYTPTVGLACQHYGLTFRRPRGLFIT 618
S L+KYI +M +Q+RNEKLFYR+L D+E MPIVYTPTVGLAC YG FRRP+GLFI+
Sbjct: 77 SPLEKYIYIMGIQERNEKLFYRILQDDIESLMPIVYTPTVGLACCQYGHIFRRPKGLFIS 136
Query: 619 IHDKGHLPTMLNSWPEDDIKAVVVTDGERILGLGDLGCYGMGIPVGKLALYTACGGVNPR 798
I D+GH+ +++++WPE+ +KAVVVTDGERILGLGDLG YGMGIPVGKL LYTAC G+ P
Sbjct: 137 ISDRGHVRSIVDNWPENHVKAVVVTDGERILGLGDLGVYGMGIPVGKLCLYTACAGIQPE 196
Query: 799 QCLPVLLDVGTNNEELLRDPLYIGLKHRRVRGQDYDDLLDEFMQAVTDKFGINCLIQFED 978
+CLPV +DVGT+N LL+DP YI +G N LIQFED
Sbjct: 197 KCLPVCIDVGTDNMALLKDPFYI--------------------------YGRNTLIQFED 230
Query: 979 FANANAFRLLNKYRNKYCMFNDDIQGTASVAVAGILAALRITKNKLSNHVFVFQGAGEAA 1158
F N NAFR L KY+ KYC FNDDIQGTA+VA++G+LAA R+ +S H +F GAGEAA
Sbjct: 231 FGNHNAFRFLRKYQQKYCTFNDDIQGTAAVALSGLLAAQRVINKPVSEHKILFLGAGEAA 290
Query: 1159 MGIAHLLVMALEKEGVPKAEATRKIWMVDSRGLIVKGRS---HLNHEKEMFAQDHPXXXX 1329
+GIA+L+V+++ + G+ + EA RKIWM D GL+VKGR+ N E A
Sbjct: 291 LGIANLIVLSMVESGLSEEEAQRKIWMFDKSGLLVKGRTASIDSNQEPYAHAAPESIPAT 350
Query: 1330 XXXXXXXXKPTXXXXXXXXXXXFTEQILRDMASFHERPIIFALSNPTSKAECTAEKCYRV 1509
KP+ FT +++ MAS +ERPIIFALSNPT++AECTAE Y +
Sbjct: 351 FEDAVNKLKPSVIIGVAGAGPLFTHGVIKAMASINERPIIFALSNPTAQAECTAEDAYTL 410
Query: 1510 TEGRGIFASGSPFKSVTLEDGRTFIPGQGNNAYVFPGVALGVIAGGIRHIPDEIFLLTAE 1689
TEGR +FASGSPF+ V L+DGR F PGQGNNAY+FPGVAL VI RHI D +FL A+
Sbjct: 411 TEGRCLFASGSPFEPVKLQDGRVFTPGQGNNAYIFPGVALAVILCEARHISDTVFLEAAK 470
Query: 1690 QIAQEVSEQHLSQGRLYPPLSTIRDVSLRIAIKVLDYAYKHNLASYYPEPKDKEAFVRSL 1869
+ ++++ L+QGRLYP L+ I++VS IAIK+ +Y Y + +A YPEP+DK +VR
Sbjct: 471 ALTTQLTDAELAQGRLYPSLANIQEVSANIAIKLAEYLYANKMAFRYPEPEDKARYVRER 530
Query: 1870 VYTPDYDSFTLDSYTWPKEAM 1932
++ +Y S D Y WP+ ++
Sbjct: 531 IWRSNYVSLLPDVYDWPESSL 551
Database: RefSeq49_MP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 15,617,559
Number of sequences in database: 30,036
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 30036
Number of Hits to DB: 68,227,007
Number of extensions: 1931675
Number of successful extensions: 8026
Number of sequences better than 1.0e-05: 5
Number of HSP's gapped: 7939
Number of HSP's successfully gapped: 5
Length of query: 680
Length of database: 15,617,559
Length adjustment: 108
Effective length of query: 572
Effective length of database: 12,373,671
Effective search space: 7077739812
Effective search space used: 7077739812
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to RefSeqSP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= HTMT1_0093_E12
(2042 letters)
Database: RefSeq49_SP.fasta
24,897 sequences; 11,343,932 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_003129776.2| PREDICTED: LOW QUALITY PROTEIN: NADP-depende... 1130 0.0
Alignment gi|XP_001924368.2| PREDICTED: NADP-dependent malic enzyme [Sus ... 823 0.0
Alignment gi|XP_003121491.2| PREDICTED: NAD-dependent malic enzyme, mitoc... 523 e-148
>ref|XP_003129776.2| PREDICTED: LOW QUALITY PROTEIN: NADP-dependent malic enzyme,
mitochondrial [Sus scrofa].
Length = 613
Score = 1130 bits (2924), Expect = 0.0
Identities = 567/613 (92%), Positives = 568/613 (92%), Gaps = 9/613 (1%)
Frame = +1
Query: 136 MGASLGSGARVALLPRQACGAVXXXXXXXXXXGCHSKTGLPRPVPLKKRGYDVTRNPHLN 315
MGASLGSGARVALLPRQACGAV GCHSKTGLPRPVPLKKRGYDVTRNPHLN
Sbjct: 1 MGASLGSGARVALLPRQACGAVRRWAPPAPARGCHSKTGLPRPVPLKKRGYDVTRNPHLN 60
Query: 316 KGMAFTLEERLQLGIHGLIPPCFLSQDVQLLRIMRYYERQQSDLDKYIILMTLQDRNEKL 495
KGMAFTLEERLQLGIHGLIPPCFLSQDVQLLRIMRYYERQQSDLDKYIILMTLQDRNEKL
Sbjct: 61 KGMAFTLEERLQLGIHGLIPPCFLSQDVQLLRIMRYYERQQSDLDKYIILMTLQDRNEKL 120
Query: 496 FYRVLTSDVEKFMPIVYTPTVGLACQHYGLTFRRPRGLFITIHDKGHLPTMLNSWPEDDI 675
FYRVLTSDVEKFMPIVYTPTVGLACQHYGLTFRRPRGLFITIHDKGHLPTMLNSWPEDDI
Sbjct: 121 FYRVLTSDVEKFMPIVYTPTVGLACQHYGLTFRRPRGLFITIHDKGHLPTMLNSWPEDDI 180
Query: 676 KAVVVTDGERILGLGDLGCYGMGIPVGKLALYTACGGVNPRQCLPVLLDVGTNNEELLRD 855
KAVVVTDGERILGLGDLGCYGMGIPVGKLALYTACGGVNPRQCLPVLLDVGTNNEELLRD
Sbjct: 181 KAVVVTDGERILGLGDLGCYGMGIPVGKLALYTACGGVNPRQCLPVLLDVGTNNEELLRD 240
Query: 856 PLYIGLKHRRVRGQDYDDLLDEFMQAVTDKFGINCLIQFEDFANANAFRLLNKYRNKYCM 1035
PLYIGLKHRRVRGQDYDDLLDEFMQAVTDKFGINCLIQFEDFANANAFRLLNKYRNKYCM
Sbjct: 241 PLYIGLKHRRVRGQDYDDLLDEFMQAVTDKFGINCLIQFEDFANANAFRLLNKYRNKYCM 300
Query: 1036 FNDDI---------QGTASVAVAGILAALRITKNKLSNHVFVFQGAGEAAMGIAHLLVMA 1188
FNDDI QGTASV AGI AALRITK+KLSNHVFVFQGAGEAAMGIAHLLVMA
Sbjct: 301 FNDDIQGXCQSTVLQGTASVDAAGIQAALRITKDKLSNHVFVFQGAGEAAMGIAHLLVMA 360
Query: 1189 LEKEGVPKAEATRKIWMVDSRGLIVKGRSHLNHEKEMFAQDHPXXXXXXXXXXXXKPTXX 1368
LEKEGVPKAEATRKIWMVDSRGLIVKGRSHLNHEKEMFAQDHP KPT
Sbjct: 361 LEKEGVPKAEATRKIWMVDSRGLIVKGRSHLNHEKEMFAQDHPEVSSLEEVVRLVKPTAI 420
Query: 1369 XXXXXXXXXFTEQILRDMASFHERPIIFALSNPTSKAECTAEKCYRVTEGRGIFASGSPF 1548
FTEQILRDMASFHERPIIFALSNPTSKAECTAEKCYRVTEGRGIFASGSPF
Sbjct: 421 IGVAAIAGAFTEQILRDMASFHERPIIFALSNPTSKAECTAEKCYRVTEGRGIFASGSPF 480
Query: 1549 KSVTLEDGRTFIPGQGNNAYVFPGVALGVIAGGIRHIPDEIFLLTAEQIAQEVSEQHLSQ 1728
KSVTLEDGRTFIPGQGNNAYVFPGVALGVIAGGIRHIPDEIFLLTAEQIAQEVSEQHLSQ
Sbjct: 481 KSVTLEDGRTFIPGQGNNAYVFPGVALGVIAGGIRHIPDEIFLLTAEQIAQEVSEQHLSQ 540
Query: 1729 GRLYPPLSTIRDVSLRIAIKVLDYAYKHNLASYYPEPKDKEAFVRSLVYTPDYDSFTLDS 1908
GRLYPPLSTIRDVSLRIAIKVLDYAYKHNLASYYPEPKDKEAFVRSLVYTPDYDSFTLDS
Sbjct: 541 GRLYPPLSTIRDVSLRIAIKVLDYAYKHNLASYYPEPKDKEAFVRSLVYTPDYDSFTLDS 600
Query: 1909 YTWPKEAMNVQNV 1947
YTWPKEAMNVQNV
Sbjct: 601 YTWPKEAMNVQNV 613
>ref|XP_001924368.2| PREDICTED: NADP-dependent malic enzyme [Sus scrofa].
Length = 571
Score = 823 bits (2126), Expect = 0.0
Identities = 396/562 (70%), Positives = 469/562 (83%)
Frame = +1
Query: 256 PRPVPLKKRGYDVTRNPHLNKGMAFTLEERLQLGIHGLIPPCFLSQDVQLLRIMRYYERQ 435
PR +RGY VTR PHLNK +AFTLEER QL IHGL+PPCF+SQD+Q+LR+++ +ER
Sbjct: 6 PRRRHTLQRGYAVTRIPHLNKDLAFTLEERQQLNIHGLLPPCFISQDIQVLRVIKNFERL 65
Query: 436 QSDLDKYIILMTLQDRNEKLFYRVLTSDVEKFMPIVYTPTVGLACQHYGLTFRRPRGLFI 615
SD D+Y++LM LQDRNEKLFY+VL SD+EKFMPIVYTPTVGLACQ Y L FR+PRGLFI
Sbjct: 66 NSDFDRYLLLMDLQDRNEKLFYKVLMSDIEKFMPIVYTPTVGLACQQYSLAFRKPRGLFI 125
Query: 616 TIHDKGHLPTMLNSWPEDDIKAVVVTDGERILGLGDLGCYGMGIPVGKLALYTACGGVNP 795
+IHD+GH+ ++LN+WPED IKAVVVTDGERILGLGDLGC GMGIPVGKLALYTACGGVNP
Sbjct: 126 SIHDRGHVASVLNAWPEDVIKAVVVTDGERILGLGDLGCNGMGIPVGKLALYTACGGVNP 185
Query: 796 RQCLPVLLDVGTNNEELLRDPLYIGLKHRRVRGQDYDDLLDEFMQAVTDKFGINCLIQFE 975
++CLPV+LDVGT NEELL+DPLYIGL+ RRVRG +YDD LDEFM+AV+ K+G+NCLIQFE
Sbjct: 186 QECLPVILDVGTENEELLKDPLYIGLRQRRVRGPEYDDFLDEFMEAVSSKYGMNCLIQFE 245
Query: 976 DFANANAFRLLNKYRNKYCMFNDDIQGTASVAVAGILAALRITKNKLSNHVFVFQGAGEA 1155
DFAN NAFRLL KY+N+YC FNDDIQGTASVAVAGILAALRITKNKLS+ +FQGAGEA
Sbjct: 246 DFANINAFRLLKKYQNQYCTFNDDIQGTASVAVAGILAALRITKNKLSDQTILFQGAGEA 305
Query: 1156 AMGIAHLLVMALEKEGVPKAEATRKIWMVDSRGLIVKGRSHLNHEKEMFAQDHPXXXXXX 1335
A+GIAHL+VMA+EKEGVPK +A +KIW+VDS+GLIVKGR+ L HEKE FA +H
Sbjct: 306 ALGIAHLIVMAMEKEGVPKEKAIKKIWLVDSKGLIVKGRAALTHEKEEFAHEHEEMKNLE 365
Query: 1336 XXXXXXKPTXXXXXXXXXXXFTEQILRDMASFHERPIIFALSNPTSKAECTAEKCYRVTE 1515
KPT F+EQIL+DMA+F+ERPIIFALSNPTSKAECTAE+CY +T+
Sbjct: 366 AIVQDIKPTALIGVAAIGGAFSEQILKDMAAFNERPIIFALSNPTSKAECTAEQCYTLTQ 425
Query: 1516 GRGIFASGSPFKSVTLEDGRTFIPGQGNNAYVFPGVALGVIAGGIRHIPDEIFLLTAEQI 1695
GR IFASGSPF VTL G+T PGQGNN+YVFPGVALGV+A G+RHI D+IFL TAE I
Sbjct: 426 GRAIFASGSPFDPVTLPSGQTLYPGQGNNSYVFPGVALGVVACGLRHITDKIFLTTAEVI 485
Query: 1696 AQEVSEQHLSQGRLYPPLSTIRDVSLRIAIKVLDYAYKHNLASYYPEPKDKEAFVRSLVY 1875
AQ+VS++HL +GRLYPPL+TIRDVSL+IA K++ AY+ A+ YPEP +KEAFVRS +Y
Sbjct: 486 AQQVSDKHLEEGRLYPPLNTIRDVSLKIAEKIVRDAYQEKTATIYPEPSNKEAFVRSQMY 545
Query: 1876 TPDYDSFTLDSYTWPKEAMNVQ 1941
+ DYD D Y+WP+EA +Q
Sbjct: 546 STDYDQILPDGYSWPEEAQKIQ 567
>ref|XP_003121491.2| PREDICTED: NAD-dependent malic enzyme, mitochondrial [Sus scrofa].
Length = 502
Score = 523 bits (1346), Expect = e-148
Identities = 257/457 (56%), Positives = 330/457 (72%), Gaps = 4/457 (0%)
Frame = +1
Query: 259 RPVPLKKRGYDVTRNPHLNKGMAFTLEERLQLGIHGLIPPCFLSQDVQLLRIMRYYERQQ 438
R + +K++G + NP NKGMAFTL+ER LG+ GL+PP +QD+Q LR R ++
Sbjct: 18 RHLHIKEKGKPLMLNPRTNKGMAFTLQERQMLGLQGLLPPKIETQDIQALRFHRNVKKLN 77
Query: 439 SDLDKYIILMTLQDRNEKLFYRVLTSDVEKFMPIVYTPTVGLACQHYGLTFRRPRGLFIT 618
L+KYI +M +Q+RNEKLFYR+L D+E MPIVYTPTVGLAC YG FRRP+GLFI+
Sbjct: 78 GPLEKYIYIMGIQERNEKLFYRILQDDIETLMPIVYTPTVGLACSQYGHIFRRPKGLFIS 137
Query: 619 IHDKGHLPTMLNSWPEDDIKAVVVTDGERILGLGDLGCYGMGIPVGKLALYTACGGVNPR 798
I D+GH+ +++++WPE+ +KAVVVTDGERILGLGDLG YGMGIPVGKL LYTAC G+ P
Sbjct: 138 ISDRGHVRSIVDNWPENHVKAVVVTDGERILGLGDLGVYGMGIPVGKLCLYTACAGIRPD 197
Query: 799 QCLPVLLDVGTNNEELLRDPLYIGLKHRRVRGQDYDDLLDEFMQAVTDKFGINCLIQFED 978
+CLPV +DVGT+N LL+DP Y+GL +R R Q YDDL+DEFM+A+TD++G N LIQFED
Sbjct: 198 RCLPVCIDVGTDNPALLKDPFYMGLYQKRDRSQRYDDLIDEFMKAITDRYGRNILIQFED 257
Query: 979 FANANAFRLLNKYRNKYCMFNDDIQGTASVAVAGILAALRITKNKLSNHVFVFQGAGEAA 1158
F N NAFR L KYR KYC FNDDIQGTA+VA+AG+LAA ++ +S H +F GAGE +
Sbjct: 258 FGNHNAFRFLRKYREKYCTFNDDIQGTAAVALAGLLAAQKVIGKSISEHKILFLGAGEVS 317
Query: 1159 MG-IAHLLVMALEKEGVPKAEATRKIWMVDSRGLIVKGR-SHLNHEKEMFAQDHP--XXX 1326
IA+L+VMA+ + G+ + EA +KIWMVD GL+ KGR + ++ +E FA P
Sbjct: 318 CSWIANLIVMAMVENGLSEEEAQKKIWMVDKFGLLFKGRKAKIDSHQEPFAHPAPDNIPD 377
Query: 1327 XXXXXXXXXKPTXXXXXXXXXXXFTEQILRDMASFHERPIIFALSNPTSKAECTAEKCYR 1506
KP+ FT +++ MA +ERPIIFALSNPT++AECTAE+ Y
Sbjct: 378 NFEDAVNILKPSAIIGVAGAGRLFTHNVIKAMADINERPIIFALSNPTAQAECTAEEAYT 437
Query: 1507 VTEGRGIFASGSPFKSVTLEDGRTFIPGQGNNAYVFP 1617
+TEGR +FASGSPF V L DG+ F PGQGNN Y+FP
Sbjct: 438 LTEGRCLFASGSPFGPVKLSDGQVFTPGQGNNVYIFP 474
Database: RefSeq49_SP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 11,343,932
Number of sequences in database: 24,897
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 24897
Number of Hits to DB: 51,064,329
Number of extensions: 1492246
Number of successful extensions: 7086
Number of sequences better than 1.0e-05: 3
Number of HSP's gapped: 6957
Number of HSP's successfully gapped: 3
Length of query: 680
Length of database: 11,343,932
Length adjustment: 106
Effective length of query: 574
Effective length of database: 8,704,850
Effective search space: 4996583900
Effective search space used: 4996583900
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to Sscrofa10_2
BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= HTMT1_0093_E12
(2042 letters)
Database: Sscrofa_10.2.fasta
4582 sequences; 2,808,509,378 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Sscrofa_Chr09 472 e-130
Sscrofa_Chr01 66 8e-08
>Sscrofa_Chr09
|| Length = 153670197
Score = 472 bits (238), Expect = e-130
Identities = 238/238 (100%)
Strand = Plus / Minus
Query: 1789 gtcctcgactacgcgtacaaacacaacctggcctcctactacccagagcccaaggacaag 1848
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22589869 gtcctcgactacgcgtacaaacacaacctggcctcctactacccagagcccaaggacaag 22589810
Query: 1849 gaggcttttgtaagatccctggtctatactccagactatgactcctttacgctggacagc 1908
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22589809 gaggcttttgtaagatccctggtctatactccagactatgactcctttacgctggacagc 22589750
Query: 1909 tacacttggcccaaggaagccatgaatgttcagaatgtctgatgcaattgcagaggttca 1968
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22589749 tacacttggcccaaggaagccatgaatgttcagaatgtctgatgcaattgcagaggttca 22589690
Query: 1969 tggggggctggatgaagcccaaagtaacactggaactataaatgggatccaaactggc 2026
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22589689 tggggggctggatgaagcccaaagtaacactggaactataaatgggatccaaactggc 22589632
Score = 398 bits (201), Expect = e-108
Identities = 201/201 (100%)
Strand = Plus / Minus
Query: 119 aggtctgcgcaaggaccatgggtgcgtcgctgggcagcggcgcgcgggtggctctcctgc 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22780254 aggtctgcgcaaggaccatgggtgcgtcgctgggcagcggcgcgcgggtggctctcctgc 22780195
Query: 179 cccgccaggcctgcggcgccgtccggcgctgggcaccccccgcgcccgcccgaggctgcc 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22780194 cccgccaggcctgcggcgccgtccggcgctgggcaccccccgcgcccgcccgaggctgcc 22780135
Query: 239 actccaagacgggcctgccgcgtcctgtgcccctgaagaagcgcggatacgatgtcacca 298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22780134 actccaagacgggcctgccgcgtcctgtgcccctgaagaagcgcggatacgatgtcacca 22780075
Query: 299 ggaatccgcatctcaacaagg 319
|||||||||||||||||||||
Sbjct: 22780074 ggaatccgcatctcaacaagg 22780054
Score = 327 bits (165), Expect = 1e-86
Identities = 165/165 (100%)
Strand = Plus / Minus
Query: 677 aggctgtggtggtgaccgatggggagcgcatcctgggcctgggagacctgggctgctacg 736
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22646698 aggctgtggtggtgaccgatggggagcgcatcctgggcctgggagacctgggctgctacg 22646639
Query: 737 gcatgggcatccccgtgggcaagctggccctgtacacggcgtgtggaggcgtcaaccctc 796
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22646638 gcatgggcatccccgtgggcaagctggccctgtacacggcgtgtggaggcgtcaaccctc 22646579
Query: 797 ggcagtgcctccctgtcctgctggacgtcggcaccaacaacgagg 841
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22646578 ggcagtgcctccctgtcctgctggacgtcggcaccaacaacgagg 22646534
Score = 317 bits (160), Expect = 1e-83
Identities = 172/176 (97%)
Strand = Plus / Minus
Query: 1514 agggccgagggatctttgccagtggaagtccttttaaaagcgtgaccctggaagatggca 1573
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 22593874 agggccgagggatctttgccagtgggagtccttttaaaagcgtgaccctggaagatggca 22593815
Query: 1574 ggaccttcattcctgggcagggcaacaacgcctacgtgttccccggagtggctctgggcg 1633
||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 22593814 ggaccttcattcccgggcagggaaacaacgcctacgtgttccccggagtggctctgggcg 22593755
Query: 1634 tcatcgctggtgggatccggcacatcccagacgagatcttcctcctgacagcagag 1689
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22593754 tcatcgctggcgggatccggcacatcccagacgagatcttcctcctgacagcagag 22593699
Score = 297 bits (150), Expect = 1e-77
Identities = 150/150 (100%)
Strand = Plus / Minus
Query: 453 gtacatcattctgatgaccctccaagaccggaacgagaagctcttctaccgagtgctgac 512
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22689205 gtacatcattctgatgaccctccaagaccggaacgagaagctcttctaccgagtgctgac 22689146
Query: 513 gtccgacgtggagaaattcatgcccatcgtgtacacgcccaccgtgggactggcctgtca 572
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22689145 gtccgacgtggagaaattcatgcccatcgtgtacacgcccaccgtgggactggcctgtca 22689086
Query: 573 gcactacggcctgaccttccgcaggccccg 602
||||||||||||||||||||||||||||||
Sbjct: 22689085 gcactacggcctgaccttccgcaggccccg 22689056
Score = 291 bits (147), Expect = 8e-76
Identities = 147/147 (100%)
Strand = Plus / Minus
Query: 1370 taggtgttgccgccatcgcaggagccttcacggagcagattctgagggacatggcctcct 1429
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22594573 taggtgttgccgccatcgcaggagccttcacggagcagattctgagggacatggcctcct 22594514
Query: 1430 tccacgagcgccctatcatctttgccctgagcaaccccaccagcaaggccgagtgcacgg 1489
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22594513 tccacgagcgccctatcatctttgccctgagcaaccccaccagcaaggccgagtgcacgg 22594454
Query: 1490 ctgagaagtgctaccgggtcaccgagg 1516
|||||||||||||||||||||||||||
Sbjct: 22594453 ctgagaagtgctaccgggtcaccgagg 22594427
Score = 240 bits (121), Expect = 3e-60
Identities = 121/121 (100%)
Strand = Plus / Minus
Query: 2 agcgcctcgccccgcctgccccgcagccgggtcgcgtagacatcagctccgggcacagca 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22780675 agcgcctcgccccgcctgccccgcagccgggtcgcgtagacatcagctccgggcacagca 22780616
Query: 62 caggtgggctggggaagccagagacccaggcgctccaccgccaccgatcgggattggagg 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22780615 caggtgggctggggaagccagagacccaggcgctccaccgccaccgatcgggattggagg 22780556
Query: 122 t 122
|
Sbjct: 22780555 t 22780555
Score = 232 bits (117), Expect = 6e-58
Identities = 117/117 (100%)
Strand = Plus / Minus
Query: 1151 aggcagccatgggcatcgcccacctccttgtcatggccctagagaaagaaggtgtaccca 1210
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22597849 aggcagccatgggcatcgcccacctccttgtcatggccctagagaaagaaggtgtaccca 22597790
Query: 1211 aggcagaggccacaaggaagatctggatggtggactccagagggctcattgtcaagg 1267
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22597789 aggcagaggccacaaggaagatctggatggtggactccagagggctcattgtcaagg 22597733
Score = 232 bits (117), Expect = 6e-58
Identities = 131/138 (94%)
Strand = Plus / Minus
Query: 317 agggtatggccttcacacttgaagaaaggctgcagcttggaatccatggcctaatnnnnn 376
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22691970 agggtatggccttcacacttgaagaaaggctgcagcttggaatccatggcctaatccccc 22691911
Query: 377 nntgcttcttgagccaggacgtccagctcctccggatcatgagatactacgagcggcagc 436
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22691910 cctgcttcttgagccaggacgtccagctcctccggatcatgagatactacgagcggcagc 22691851
Query: 437 agagtgacctggacaagt 454
||||||||||||||||||
Sbjct: 22691850 agagtgacctggacaagt 22691833
Score = 220 bits (111), Expect = 2e-54
Identities = 111/111 (100%)
Strand = Plus / Minus
Query: 945 gtttggaataaattgcctcattcagtttgaagactttgccaacgccaatgccttccgcct 1004
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22612565 gtttggaataaattgcctcattcagtttgaagactttgccaacgccaatgccttccgcct 22612506
Query: 1005 tctcaacaaataccgcaacaagtactgcatgttcaacgatgacatccaagg 1055
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22612505 tctcaacaaataccgcaacaagtactgcatgttcaacgatgacatccaagg 22612455
Score = 214 bits (108), Expect = 1e-52
Identities = 108/108 (100%)
Strand = Plus / Minus
Query: 839 aggagctgctccgagaccctctgtacatcggcctgaagcaccggcgcgtgcgcggccaag 898
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22635204 aggagctgctccgagaccctctgtacatcggcctgaagcaccggcgcgtgcgcggccaag 22635145
Query: 899 attacgacgaccttctggacgagttcatgcaggctgtgacggacaagt 946
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22635144 attacgacgaccttctggacgagttcatgcaggctgtgacggacaagt 22635097
Score = 210 bits (106), Expect = 2e-51
Identities = 109/110 (99%)
Strand = Plus / Minus
Query: 1265 aggggaggagccacctgaaccatgagaaggagatgtttgcccaggaccatcctgaagtga 1324
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22595699 aggggaggagccacctgaaccatgagaaggagatgtttgcccaggaccatcctgaagtga 22595640
Query: 1325 gctccctcgaggaggtggtgaggctggtgaagcccacggccatcataggt 1374
||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 22595639 gctccctcgaggaggtggtgaggctggtgaagcccacagccatcataggt 22595590
Score = 204 bits (103), Expect = 1e-49
Identities = 103/103 (100%)
Strand = Plus / Minus
Query: 1688 agcaaattgcccaagaggtctcggagcagcatctgtcacaggggagactgtacccaccgc 1747
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22591655 agcaaattgcccaagaggtctcggagcagcatctgtcacaggggagactgtacccaccgc 22591596
Query: 1748 tcagcaccatccgagacgtgtctctgagaatcgccatcaaagt 1790
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22591595 tcagcaccatccgagacgtgtctctgagaatcgccatcaaagt 22591553
Score = 159 bits (80), Expect = 7e-36
Identities = 95/100 (95%)
Strand = Plus / Minus
Query: 1054 ggcacagcctccgtcgctgtggcagggatcctggctgctctgcgaatcaccaagaacaag 1113
|||||||| ||||||| || ||||||||||| |||||||||||||||||||||| |||||
Sbjct: 22598200 ggcacagcatccgtcgatgcggcagggatccaggctgctctgcgaatcaccaaggacaag 22598141
Query: 1114 ctctccaaccacgtgtttgttttccaaggtgccggtgagg 1153
||||||||||||||||||||||||||||||||||||||||
Sbjct: 22598140 ctctccaaccacgtgtttgttttccaaggtgccggtgagg 22598101
Score = 155 bits (78), Expect = 1e-34
Identities = 78/78 (100%)
Strand = Plus / Minus
Query: 602 gtgggctctttatcaccattcatgacaagggccatcttccaacaatgctgaactcttggc 661
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22656478 gtgggctctttatcaccattcatgacaagggccatcttccaacaatgctgaactcttggc 22656419
Query: 662 cagaagatgatattaagg 679
||||||||||||||||||
Sbjct: 22656418 cagaagatgatattaagg 22656401
>Sscrofa_Chr01
|| Length = 315321322
Score = 65.9 bits (33), Expect = 8e-08
Identities = 90/109 (82%)
Strand = Plus / Plus
Query: 677 aggctgtggtggtgaccgatggggagcgcatcctgggcctgggagacctgggctgctacg 736
||||||| |||||||| ||||| || || || || |||||||||||||| ||||| |||
Sbjct: 93129350 aggctgtcgtggtgactgatggagaacgtattcttggcctgggagaccttggctgtaacg 93129409
Query: 737 gcatgggcatccccgtgggcaagctggccctgtacacggcgtgtggagg 785
| ||||||||||| ||||| || ||||| || || || || ||||||||
Sbjct: 93129410 ggatgggcatccctgtgggtaaactggcactctatacagcatgtggagg 93129458
Database: Sscrofa_10.2.fasta
Posted date: Nov 16, 2011 10:34 AM
Number of letters in database: 2,808,509,378
Number of sequences in database: 4582
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4582
Number of Hits to DB: 49,610,298
Number of extensions: 240
Number of successful extensions: 240
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 239
Number of HSP's successfully gapped: 16
Length of query: 2042
Length of database: 2,808,509,378
Length adjustment: 22
Effective length of query: 2020
Effective length of database: 2,808,408,574
Effective search space: 5672985319480
Effective search space used: 5672985319480
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 18 (36.2 bits)
S2: 30 (60.0 bits)