BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ITT01_0011_G11
(1989 letters)
Database: RefSeq49_BP.fasta
33,088 sequences; 17,681,374 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_002695690.1| PREDICTED: hypothetical protein [Bos taurus]. 537 e-152
Alignment gi|XP_593741.4| PREDICTED: hypothetical protein [Bos taurus]. 537 e-152
Alignment gi|NP_777128.1| tenascin-X [Bos taurus]. 97 5e-20
Alignment gi|NP_001071494.1| tenascin C [Bos taurus]. 91 4e-18
Alignment gi|XP_002695670.1| PREDICTED: extracellular peptidase inhibitor... 84 6e-16
Alignment gi|XP_002702143.1| PREDICTED: mCG55370-like [Bos taurus]. 84 6e-16
Alignment gi|NP_001192207.1| extracellular peptidase inhibitor [Bos tauru... 80 9e-15
Alignment gi|NP_001094770.1| platelet endothelial aggregation receptor 1 ... 79 1e-14
Alignment gi|XP_002694223.1| PREDICTED: multiple epidermal growth factor-... 79 1e-14
Alignment gi|XP_873582.3| PREDICTED: multiple epidermal growth factor-lik... 79 1e-14
>ref|XP_002695690.1| PREDICTED: hypothetical protein [Bos taurus].
Length = 431
Score = 537 bits (1383), Expect = e-152
Identities = 237/409 (57%), Positives = 280/409 (68%), Gaps = 3/409 (0%)
Frame = +1
Query: 532 VGICVTECRVDQDCGEGRLCISNGCGRVCFPGRREG-CEHQCREDRDCGSGHQCVRKGCG 708
+G+CV +CR DQDC G CISNGCG VC P + C +C EDRDCG G QCV+ GC
Sbjct: 29 IGVCVEQCREDQDCVAGEKCISNGCGHVCSPAPQATICSLECSEDRDCGRGKQCVQDGCQ 88
Query: 709 HVCAPVHQVGICVTECNVDQDCGEGRQCTSNGCGRVCSPVQQEDVGICVTECKVDQDCGE 888
VC+P+ VGICV +C DQDC G +C SNGCG VCSPV Q IC EC D+DCG
Sbjct: 89 RVCSPLMSVGICVEQCREDQDCAAGEKCISNGCGHVCSPVPQAT--ICSLECSEDRDCGR 146
Query: 889 GRRCTSNGCGRVCSPVQQKEACEHQCREDRDCGSGHQCVRKGCGHVCAPVHQVDVGICVT 1068
G++C +GC RVCSP+ C QCRED+DC +G +CV GCGHVC+PV Q IC
Sbjct: 147 GKQCVQDGCQRVCSPLMSVGVCVEQCREDQDCAAGEKCVSNGCGHVCSPVPQAT--ICSR 204
Query: 1069 ECKVDQDCGEGRRCASNGCGRVCSPAQQREACEHQC*EDKDCGSGHQCVRKGCGHVCSPI 1248
EC D+DCG G++C +GC RVCSP C QC ED+DC +G +CV GCGHVCSP
Sbjct: 205 ECSEDRDCGRGKQCVQDGCRRVCSPLMSVGVCVEQCREDRDCAAGEKCVSNGCGHVCSPA 264
Query: 1249 PQVGICVTECNVDQDCGAGRRCTSNGCGRVCSP-PQGG-GLCVNRCRGNWDCGAGEECIR 1422
PQ IC +C D+DCGAGR+C S GC RVCSP P+ G+CV RCRG+WDCGAGE CIR
Sbjct: 265 PQASICEFQCFRDRDCGAGRQCVSEGCNRVCSPAPEASIGICVQRCRGHWDCGAGERCIR 324
Query: 1423 KGCGRVCSPAQEPVVGICVDQCQRHWECGPRMRCVSTGCGHICSPAQDQVEQRPGKCPVL 1602
+GC R+CSP + VGIC+DQCQ H +C RCVS GCG +CSP QD+ EQRPG CP +
Sbjct: 325 RGCSRICSPVRTAGVGICLDQCQGHRDCPAGSRCVSNGCGRVCSPTQDRQEQRPGTCPRV 384
Query: 1603 PKGTIGLCAEFCSGDDSCPSGQKCCSHGCGHSCQTAVPDEKTFPSRLDD 1749
P+G G CAE C+GD SCP GQKCCS+GCG SCQ VPD F LDD
Sbjct: 385 PEGMFGTCAERCTGDGSCPPGQKCCSNGCGKSCQ--VPD-LDFTISLDD 430
Score = 452 bits (1164), Expect = e-127
Identities = 200/406 (49%), Positives = 251/406 (61%), Gaps = 19/406 (4%)
Frame = +1
Query: 112 VGICVTECKVDQDCGAGRRCTSNGCGRVCSPIQQREACEHQCREDRDCGGGHQCVRKGCG 291
+G+CV +C+ DQDC AG +C SNGCG VCSP Q C +C EDRDCG G QCV+ GC
Sbjct: 29 IGVCVEQCREDQDCVAGEKCISNGCGHVCSPAPQATICSLECSEDRDCGRGKQCVQDGCQ 88
Query: 292 HVCAPVHQVDVGICVMECRVDQDCGEGRLCISNGCGRVCFPVRRREACEHQCREDRDCGS 471
VC+P+ + VGICV +CR DQDC G CISNGCG VC PV + C +C EDRDCG
Sbjct: 89 RVCSPL--MSVGICVEQCREDQDCAAGEKCISNGCGHVCSPVPQATICSLECSEDRDCGR 146
Query: 472 GHQCVRRGCGHVCAPVHQVDVGICVTECRVDQDCGEGRLCISNGCGRVCFP-GRREGCEH 648
G QCV+ GC VC+P+ + VG+CV +CR DQDC G C+SNGCG VC P + C
Sbjct: 147 GKQCVQDGCQRVCSPL--MSVGVCVEQCREDQDCAAGEKCVSNGCGHVCSPVPQATICSR 204
Query: 649 QCREDRDCGSGHQCVRKGCGHVCAPVHQVGICVTECNVDQDCGEGRQCTSNGCGRVCSPV 828
+C EDRDCG G QCV+ GC VC+P+ VG+CV +C D+DC G +C SNGCG VCSP
Sbjct: 205 ECSEDRDCGRGKQCVQDGCRRVCSPLMSVGVCVEQCREDRDCAAGEKCVSNGCGHVCSPA 264
Query: 829 QQEDVGICVTECKVDQDCGEGRRCTSNGCGRVCSPVQQKE--ACEHQCREDRDCGSGHQC 1002
Q IC +C D+DCG GR+C S GC RVCSP + C +CR DCG+G +C
Sbjct: 265 PQ--ASICEFQCFRDRDCGAGRQCVSEGCNRVCSPAPEASIGICVQRCRGHWDCGAGERC 322
Query: 1003 VRKGCGHVCAPVHQVDVGICVTECKVDQDCGEGRRCASNGCGRVCSPAQQRE-------- 1158
+R+GC +C+PV VGIC+ +C+ +DC G RC SNGCGRVCSP Q R+
Sbjct: 323 IRRGCSRICSPVRTAGVGICLDQCQGHRDCPAGSRCVSNGCGRVCSPTQDRQEQRPGTCP 382
Query: 1159 --------ACEHQC*EDKDCGSGHQCVRKGCGHVCSPIPQVGICVT 1272
C +C D C G +C GCG C +P + ++
Sbjct: 383 RVPEGMFGTCAERCTGDGSCPPGQKCCSNGCGKSCQ-VPDLDFTIS 427
Score = 444 bits (1143), Expect = e-124
Identities = 194/401 (48%), Positives = 244/401 (60%), Gaps = 19/401 (4%)
Frame = +1
Query: 205 IQQREACEHQCREDRDCGGGHQCVRKGCGHVCAPVHQVDVGICVMECRVDQDCGEGRLCI 384
+Q C QCRED+DC G +C+ GCGHVC+P Q IC +EC D+DCG G+ C+
Sbjct: 26 LQAIGVCVEQCREDQDCVAGEKCISNGCGHVCSPAPQAT--ICSLECSEDRDCGRGKQCV 83
Query: 385 SNGCGRVCFPVRRREACEHQCREDRDCGSGHQCVRRGCGHVCAPVHQVDVGICVTECRVD 564
+GC RVC P+ C QCRED+DC +G +C+ GCGHVC+PV Q IC EC D
Sbjct: 84 QDGCQRVCSPLMSVGICVEQCREDQDCAAGEKCISNGCGHVCSPVPQAT--ICSLECSED 141
Query: 565 QDCGEGRLCISNGCGRVCFPGRREG-CEHQCREDRDCGSGHQCVRKGCGHVCAPVHQVGI 741
+DCG G+ C+ +GC RVC P G C QCRED+DC +G +CV GCGHVC+PV Q I
Sbjct: 142 RDCGRGKQCVQDGCQRVCSPLMSVGVCVEQCREDQDCAAGEKCVSNGCGHVCSPVPQATI 201
Query: 742 CVTECNVDQDCGEGRQCTSNGCGRVCSPVQQEDVGICVTECKVDQDCGEGRRCTSNGCGR 921
C EC+ D+DCG G+QC +GC RVCSP+ VG+CV +C+ D+DC G +C SNGCG
Sbjct: 202 CSRECSEDRDCGRGKQCVQDGCRRVCSPLM--SVGVCVEQCREDRDCAAGEKCVSNGCGH 259
Query: 922 VCSPVQQKEACEHQCREDRDCGSGHQCVRKGCGHVCAPVHQVDVGICVTECKVDQDCGEG 1101
VCSP Q CE QC DRDCG+G QCV +GC VC+P + +GICV C+ DCG G
Sbjct: 260 VCSPAPQASICEFQCFRDRDCGAGRQCVSEGCNRVCSPAPEASIGICVQRCRGHWDCGAG 319
Query: 1102 RRCASNGCGRVCSPAQQREA--CEHQC*EDKDCGSGHQCVRKGCGHVCSP---------- 1245
RC GC R+CSP + C QC +DC +G +CV GCG VCSP
Sbjct: 320 ERCIRRGCSRICSPVRTAGVGICLDQCQGHRDCPAGSRCVSNGCGRVCSPTQDRQEQRPG 379
Query: 1246 ----IPQ--VGICVTECNVDQDCGAGRRCTSNGCGRVCSPP 1350
+P+ G C C D C G++C SNGCG+ C P
Sbjct: 380 TCPRVPEGMFGTCAERCTGDGSCPPGQKCCSNGCGKSCQVP 420
Score = 374 bits (961), Expect = e-103
Identities = 163/327 (49%), Positives = 203/327 (62%), Gaps = 19/327 (5%)
Frame = +1
Query: 106 VDVGICVTECKVDQDCGAGRRCTSNGCGRVCSPIQQREACEHQCREDRDCGGGHQCVRKG 285
+ VGICV +C+ DQDC AG +C SNGCG VCSP+ Q C +C EDRDCG G QCV+ G
Sbjct: 95 MSVGICVEQCREDQDCAAGEKCISNGCGHVCSPVPQATICSLECSEDRDCGRGKQCVQDG 154
Query: 286 CGHVCAPVHQVDVGICVMECRVDQDCGEGRLCISNGCGRVCFPVRRREACEHQCREDRDC 465
C VC+P+ + VG+CV +CR DQDC G C+SNGCG VC PV + C +C EDRDC
Sbjct: 155 CQRVCSPL--MSVGVCVEQCREDQDCAAGEKCVSNGCGHVCSPVPQATICSRECSEDRDC 212
Query: 466 GSGHQCVRRGCGHVCAPVHQVDVGICVTECRVDQDCGEGRLCISNGCGRVCFPGRREG-C 642
G G QCV+ GC VC+P+ + VG+CV +CR D+DC G C+SNGCG VC P + C
Sbjct: 213 GRGKQCVQDGCRRVCSPL--MSVGVCVEQCREDRDCAAGEKCVSNGCGHVCSPAPQASIC 270
Query: 643 EHQCREDRDCGSGHQCVRKGCGHVCAPVHQ--VGICVTECNVDQDCGEGRQCTSNGCGRV 816
E QC DRDCG+G QCV +GC VC+P + +GICV C DCG G +C GC R+
Sbjct: 271 EFQCFRDRDCGAGRQCVSEGCNRVCSPAPEASIGICVQRCRGHWDCGAGERCIRRGCSRI 330
Query: 817 CSPVQQEDVGICVTECKVDQDCGEGRRCTSNGCGRVCSPVQQKE---------------- 948
CSPV+ VGIC+ +C+ +DC G RC SNGCGRVCSP Q ++
Sbjct: 331 CSPVRTAGVGICLDQCQGHRDCPAGSRCVSNGCGRVCSPTQDRQEQRPGTCPRVPEGMFG 390
Query: 949 ACEHQCREDRDCGSGHQCVRKGCGHVC 1029
C +C D C G +C GCG C
Sbjct: 391 TCAERCTGDGSCPPGQKCCSNGCGKSC 417
Score = 142 bits (358), Expect = 1e-33
Identities = 63/154 (40%), Positives = 82/154 (53%), Gaps = 18/154 (11%)
Frame = +1
Query: 103 AVDVGICVTECKVDQDCGAGRRCTSNGCGRVCSPIQQRE--ACEHQCREDRDCGGGHQCV 276
A IC +C D+DCGAGR+C S GC RVCSP + C +CR DCG G +C+
Sbjct: 264 APQASICEFQCFRDRDCGAGRQCVSEGCNRVCSPAPEASIGICVQRCRGHWDCGAGERCI 323
Query: 277 RKGCGHVCAPVHQVDVGICVMECRVDQDCGEGRLCISNGCGRVCFPVRRRE--------- 429
R+GC +C+PV VGIC+ +C+ +DC G C+SNGCGRVC P + R+
Sbjct: 324 RRGCSRICSPVRTAGVGICLDQCQGHRDCPAGSRCVSNGCGRVCSPTQDRQEQRPGTCPR 383
Query: 430 -------ACEHQCREDRDCGSGHQCVRRGCGHVC 510
C +C D C G +C GCG C
Sbjct: 384 VPEGMFGTCAERCTGDGSCPPGQKCCSNGCGKSC 417
Score = 108 bits (270), Expect = 2e-23
Identities = 57/167 (34%), Positives = 78/167 (46%), Gaps = 50/167 (29%)
Frame = +1
Query: 1351 QGGGLCVNRCRGNWDCGAGEECIRKGCGRVCSPAQEPV---------------------- 1464
Q G+CV +CR + DC AGE+CI GCG VCSPA +
Sbjct: 27 QAIGVCVEQCREDQDCVAGEKCISNGCGHVCSPAPQATICSLECSEDRDCGRGKQCVQDG 86
Query: 1465 ----------VGICVDQCQRHWECGPRMRCVSTGCGHICSP-----------AQDQVEQR 1581
VGICV+QC+ +C +C+S GCGH+CSP ++D+ R
Sbjct: 87 CQRVCSPLMSVGICVEQCREDQDCAAGEKCISNGCGHVCSPVPQATICSLECSEDRDCGR 146
Query: 1582 PGKC-------PVLPKGTIGLCAEFCSGDDSCPSGQKCCSHGCGHSC 1701
+C P ++G+C E C D C +G+KC S+GCGH C
Sbjct: 147 GKQCVQDGCQRVCSPLMSVGVCVEQCREDQDCAAGEKCVSNGCGHVC 193
>ref|XP_593741.4| PREDICTED: hypothetical protein [Bos taurus].
Length = 431
Score = 537 bits (1383), Expect = e-152
Identities = 237/409 (57%), Positives = 280/409 (68%), Gaps = 3/409 (0%)
Frame = +1
Query: 532 VGICVTECRVDQDCGEGRLCISNGCGRVCFPGRREG-CEHQCREDRDCGSGHQCVRKGCG 708
+G+CV +CR DQDC G CISNGCG VC P + C +C EDRDCG G QCV+ GC
Sbjct: 29 IGVCVEQCREDQDCVAGEKCISNGCGHVCSPAPQATICSLECSEDRDCGRGKQCVQDGCQ 88
Query: 709 HVCAPVHQVGICVTECNVDQDCGEGRQCTSNGCGRVCSPVQQEDVGICVTECKVDQDCGE 888
VC+P+ VGICV +C DQDC G +C SNGCG VCSPV Q IC EC D+DCG
Sbjct: 89 RVCSPLMSVGICVEQCREDQDCAAGEKCISNGCGHVCSPVPQAT--ICSLECSEDRDCGR 146
Query: 889 GRRCTSNGCGRVCSPVQQKEACEHQCREDRDCGSGHQCVRKGCGHVCAPVHQVDVGICVT 1068
G++C +GC RVCSP+ C QCRED+DC +G +CV GCGHVC+PV Q IC
Sbjct: 147 GKQCVQDGCQRVCSPLMSVGVCVEQCREDQDCAAGEKCVSNGCGHVCSPVPQAT--ICSR 204
Query: 1069 ECKVDQDCGEGRRCASNGCGRVCSPAQQREACEHQC*EDKDCGSGHQCVRKGCGHVCSPI 1248
EC D+DCG G++C +GC RVCSP C QC ED+DC +G +CV GCGHVCSP
Sbjct: 205 ECSEDRDCGRGKQCVQDGCRRVCSPLMSVGVCVEQCREDRDCAAGEKCVSNGCGHVCSPA 264
Query: 1249 PQVGICVTECNVDQDCGAGRRCTSNGCGRVCSP-PQGG-GLCVNRCRGNWDCGAGEECIR 1422
PQ IC +C D+DCGAGR+C S GC RVCSP P+ G+CV RCRG+WDCGAGE CIR
Sbjct: 265 PQASICEFQCFRDRDCGAGRQCVSEGCNRVCSPAPEASIGICVQRCRGHWDCGAGERCIR 324
Query: 1423 KGCGRVCSPAQEPVVGICVDQCQRHWECGPRMRCVSTGCGHICSPAQDQVEQRPGKCPVL 1602
+GC R+CSP + VGIC+DQCQ H +C RCVS GCG +CSP QD+ EQRPG CP +
Sbjct: 325 RGCSRICSPVRTAGVGICLDQCQGHRDCPAGSRCVSNGCGRVCSPTQDRQEQRPGTCPRV 384
Query: 1603 PKGTIGLCAEFCSGDDSCPSGQKCCSHGCGHSCQTAVPDEKTFPSRLDD 1749
P+G G CAE C+GD SCP GQKCCS+GCG SCQ VPD F LDD
Sbjct: 385 PEGMFGTCAERCTGDGSCPPGQKCCSNGCGKSCQ--VPD-LDFTISLDD 430
Score = 452 bits (1164), Expect = e-127
Identities = 200/406 (49%), Positives = 251/406 (61%), Gaps = 19/406 (4%)
Frame = +1
Query: 112 VGICVTECKVDQDCGAGRRCTSNGCGRVCSPIQQREACEHQCREDRDCGGGHQCVRKGCG 291
+G+CV +C+ DQDC AG +C SNGCG VCSP Q C +C EDRDCG G QCV+ GC
Sbjct: 29 IGVCVEQCREDQDCVAGEKCISNGCGHVCSPAPQATICSLECSEDRDCGRGKQCVQDGCQ 88
Query: 292 HVCAPVHQVDVGICVMECRVDQDCGEGRLCISNGCGRVCFPVRRREACEHQCREDRDCGS 471
VC+P+ + VGICV +CR DQDC G CISNGCG VC PV + C +C EDRDCG
Sbjct: 89 RVCSPL--MSVGICVEQCREDQDCAAGEKCISNGCGHVCSPVPQATICSLECSEDRDCGR 146
Query: 472 GHQCVRRGCGHVCAPVHQVDVGICVTECRVDQDCGEGRLCISNGCGRVCFP-GRREGCEH 648
G QCV+ GC VC+P+ + VG+CV +CR DQDC G C+SNGCG VC P + C
Sbjct: 147 GKQCVQDGCQRVCSPL--MSVGVCVEQCREDQDCAAGEKCVSNGCGHVCSPVPQATICSR 204
Query: 649 QCREDRDCGSGHQCVRKGCGHVCAPVHQVGICVTECNVDQDCGEGRQCTSNGCGRVCSPV 828
+C EDRDCG G QCV+ GC VC+P+ VG+CV +C D+DC G +C SNGCG VCSP
Sbjct: 205 ECSEDRDCGRGKQCVQDGCRRVCSPLMSVGVCVEQCREDRDCAAGEKCVSNGCGHVCSPA 264
Query: 829 QQEDVGICVTECKVDQDCGEGRRCTSNGCGRVCSPVQQKE--ACEHQCREDRDCGSGHQC 1002
Q IC +C D+DCG GR+C S GC RVCSP + C +CR DCG+G +C
Sbjct: 265 PQ--ASICEFQCFRDRDCGAGRQCVSEGCNRVCSPAPEASIGICVQRCRGHWDCGAGERC 322
Query: 1003 VRKGCGHVCAPVHQVDVGICVTECKVDQDCGEGRRCASNGCGRVCSPAQQRE-------- 1158
+R+GC +C+PV VGIC+ +C+ +DC G RC SNGCGRVCSP Q R+
Sbjct: 323 IRRGCSRICSPVRTAGVGICLDQCQGHRDCPAGSRCVSNGCGRVCSPTQDRQEQRPGTCP 382
Query: 1159 --------ACEHQC*EDKDCGSGHQCVRKGCGHVCSPIPQVGICVT 1272
C +C D C G +C GCG C +P + ++
Sbjct: 383 RVPEGMFGTCAERCTGDGSCPPGQKCCSNGCGKSCQ-VPDLDFTIS 427
Score = 444 bits (1143), Expect = e-124
Identities = 194/401 (48%), Positives = 244/401 (60%), Gaps = 19/401 (4%)
Frame = +1
Query: 205 IQQREACEHQCREDRDCGGGHQCVRKGCGHVCAPVHQVDVGICVMECRVDQDCGEGRLCI 384
+Q C QCRED+DC G +C+ GCGHVC+P Q IC +EC D+DCG G+ C+
Sbjct: 26 LQAIGVCVEQCREDQDCVAGEKCISNGCGHVCSPAPQAT--ICSLECSEDRDCGRGKQCV 83
Query: 385 SNGCGRVCFPVRRREACEHQCREDRDCGSGHQCVRRGCGHVCAPVHQVDVGICVTECRVD 564
+GC RVC P+ C QCRED+DC +G +C+ GCGHVC+PV Q IC EC D
Sbjct: 84 QDGCQRVCSPLMSVGICVEQCREDQDCAAGEKCISNGCGHVCSPVPQAT--ICSLECSED 141
Query: 565 QDCGEGRLCISNGCGRVCFPGRREG-CEHQCREDRDCGSGHQCVRKGCGHVCAPVHQVGI 741
+DCG G+ C+ +GC RVC P G C QCRED+DC +G +CV GCGHVC+PV Q I
Sbjct: 142 RDCGRGKQCVQDGCQRVCSPLMSVGVCVEQCREDQDCAAGEKCVSNGCGHVCSPVPQATI 201
Query: 742 CVTECNVDQDCGEGRQCTSNGCGRVCSPVQQEDVGICVTECKVDQDCGEGRRCTSNGCGR 921
C EC+ D+DCG G+QC +GC RVCSP+ VG+CV +C+ D+DC G +C SNGCG
Sbjct: 202 CSRECSEDRDCGRGKQCVQDGCRRVCSPLM--SVGVCVEQCREDRDCAAGEKCVSNGCGH 259
Query: 922 VCSPVQQKEACEHQCREDRDCGSGHQCVRKGCGHVCAPVHQVDVGICVTECKVDQDCGEG 1101
VCSP Q CE QC DRDCG+G QCV +GC VC+P + +GICV C+ DCG G
Sbjct: 260 VCSPAPQASICEFQCFRDRDCGAGRQCVSEGCNRVCSPAPEASIGICVQRCRGHWDCGAG 319
Query: 1102 RRCASNGCGRVCSPAQQREA--CEHQC*EDKDCGSGHQCVRKGCGHVCSP---------- 1245
RC GC R+CSP + C QC +DC +G +CV GCG VCSP
Sbjct: 320 ERCIRRGCSRICSPVRTAGVGICLDQCQGHRDCPAGSRCVSNGCGRVCSPTQDRQEQRPG 379
Query: 1246 ----IPQ--VGICVTECNVDQDCGAGRRCTSNGCGRVCSPP 1350
+P+ G C C D C G++C SNGCG+ C P
Sbjct: 380 TCPRVPEGMFGTCAERCTGDGSCPPGQKCCSNGCGKSCQVP 420
Score = 374 bits (961), Expect = e-103
Identities = 163/327 (49%), Positives = 203/327 (62%), Gaps = 19/327 (5%)
Frame = +1
Query: 106 VDVGICVTECKVDQDCGAGRRCTSNGCGRVCSPIQQREACEHQCREDRDCGGGHQCVRKG 285
+ VGICV +C+ DQDC AG +C SNGCG VCSP+ Q C +C EDRDCG G QCV+ G
Sbjct: 95 MSVGICVEQCREDQDCAAGEKCISNGCGHVCSPVPQATICSLECSEDRDCGRGKQCVQDG 154
Query: 286 CGHVCAPVHQVDVGICVMECRVDQDCGEGRLCISNGCGRVCFPVRRREACEHQCREDRDC 465
C VC+P+ + VG+CV +CR DQDC G C+SNGCG VC PV + C +C EDRDC
Sbjct: 155 CQRVCSPL--MSVGVCVEQCREDQDCAAGEKCVSNGCGHVCSPVPQATICSRECSEDRDC 212
Query: 466 GSGHQCVRRGCGHVCAPVHQVDVGICVTECRVDQDCGEGRLCISNGCGRVCFPGRREG-C 642
G G QCV+ GC VC+P+ + VG+CV +CR D+DC G C+SNGCG VC P + C
Sbjct: 213 GRGKQCVQDGCRRVCSPL--MSVGVCVEQCREDRDCAAGEKCVSNGCGHVCSPAPQASIC 270
Query: 643 EHQCREDRDCGSGHQCVRKGCGHVCAPVHQ--VGICVTECNVDQDCGEGRQCTSNGCGRV 816
E QC DRDCG+G QCV +GC VC+P + +GICV C DCG G +C GC R+
Sbjct: 271 EFQCFRDRDCGAGRQCVSEGCNRVCSPAPEASIGICVQRCRGHWDCGAGERCIRRGCSRI 330
Query: 817 CSPVQQEDVGICVTECKVDQDCGEGRRCTSNGCGRVCSPVQQKE---------------- 948
CSPV+ VGIC+ +C+ +DC G RC SNGCGRVCSP Q ++
Sbjct: 331 CSPVRTAGVGICLDQCQGHRDCPAGSRCVSNGCGRVCSPTQDRQEQRPGTCPRVPEGMFG 390
Query: 949 ACEHQCREDRDCGSGHQCVRKGCGHVC 1029
C +C D C G +C GCG C
Sbjct: 391 TCAERCTGDGSCPPGQKCCSNGCGKSC 417
Score = 142 bits (358), Expect = 1e-33
Identities = 63/154 (40%), Positives = 82/154 (53%), Gaps = 18/154 (11%)
Frame = +1
Query: 103 AVDVGICVTECKVDQDCGAGRRCTSNGCGRVCSPIQQRE--ACEHQCREDRDCGGGHQCV 276
A IC +C D+DCGAGR+C S GC RVCSP + C +CR DCG G +C+
Sbjct: 264 APQASICEFQCFRDRDCGAGRQCVSEGCNRVCSPAPEASIGICVQRCRGHWDCGAGERCI 323
Query: 277 RKGCGHVCAPVHQVDVGICVMECRVDQDCGEGRLCISNGCGRVCFPVRRRE--------- 429
R+GC +C+PV VGIC+ +C+ +DC G C+SNGCGRVC P + R+
Sbjct: 324 RRGCSRICSPVRTAGVGICLDQCQGHRDCPAGSRCVSNGCGRVCSPTQDRQEQRPGTCPR 383
Query: 430 -------ACEHQCREDRDCGSGHQCVRRGCGHVC 510
C +C D C G +C GCG C
Sbjct: 384 VPEGMFGTCAERCTGDGSCPPGQKCCSNGCGKSC 417
Score = 108 bits (270), Expect = 2e-23
Identities = 57/167 (34%), Positives = 78/167 (46%), Gaps = 50/167 (29%)
Frame = +1
Query: 1351 QGGGLCVNRCRGNWDCGAGEECIRKGCGRVCSPAQEPV---------------------- 1464
Q G+CV +CR + DC AGE+CI GCG VCSPA +
Sbjct: 27 QAIGVCVEQCREDQDCVAGEKCISNGCGHVCSPAPQATICSLECSEDRDCGRGKQCVQDG 86
Query: 1465 ----------VGICVDQCQRHWECGPRMRCVSTGCGHICSP-----------AQDQVEQR 1581
VGICV+QC+ +C +C+S GCGH+CSP ++D+ R
Sbjct: 87 CQRVCSPLMSVGICVEQCREDQDCAAGEKCISNGCGHVCSPVPQATICSLECSEDRDCGR 146
Query: 1582 PGKC-------PVLPKGTIGLCAEFCSGDDSCPSGQKCCSHGCGHSC 1701
+C P ++G+C E C D C +G+KC S+GCGH C
Sbjct: 147 GKQCVQDGCQRVCSPLMSVGVCVEQCREDQDCAAGEKCVSNGCGHVC 193
>ref|NP_777128.1| tenascin-X [Bos taurus].
Length = 4135
Score = 97.1 bits (240), Expect = 5e-20
Identities = 145/513 (28%), Positives = 180/513 (35%), Gaps = 63/513 (12%)
Frame = +1
Query: 358 DCGEGRLCISNGCGRVCFPVRRREACEHQCREDRDCGSGHQCVRRGCGHVCAPVHQVD-- 531
DC + C+ C VCFP +C DC +CV+ C VC D
Sbjct: 189 DCNDQGRCVRGRC--VCFPGYTGPSCSWPSCPG-DCHGRGRCVQGVC--VCRSGFSGDDC 243
Query: 532 -VGICVTECRVDQDCGEGRLCISNGCGRVCFPGRR-EGCE-HQCREDRDCGSGHQCVRKG 702
V C C C +GR VC PG E C C RDC +C
Sbjct: 244 SVRSCPRGCSQRGRCEDGRC--------VCNPGYSGEDCGVRSC--PRDCSQRGRCENGR 293
Query: 703 CGHVCAPVHQVGIC-VTECNVDQDCGEGRQCTSNGCGRVCSPVQQEDVGICVTEC---KV 870
C VC P + C V C + C + +C C VC P G +C
Sbjct: 294 C--VCNPGYTGDDCGVRSC--PRGCSQKGRCEDGRC--VCDP------GYTGDDCGSRTC 341
Query: 871 DQDCGEGRRCTSNGCGRVCSPVQQKE-----ACEHQCREDRDCGSGHQCVRKGCGHVCAP 1035
DCGEG RC C VC P E C CR R C G +C+ C P
Sbjct: 342 PWDCGEGGRCVDGRC--VCWPGYAGEDCSTRTCPRDCRGPRGCEDG-ECI-------CDP 391
Query: 1036 VHQVD---VGICVTECKVDQDCGEGR----------RCASNGCGRVCSPAQQREACE--- 1167
+ D V C ++C C +GR C + C R C + R CE
Sbjct: 392 GYSGDDCGVRSCPSDCNQRGRCEDGRCVCWPGYSGPDCGARACPRDC---RGRGRCENGV 448
Query: 1168 ---HQC*EDKDCGSGH---QCVRKG-CGH---VCSPIPQVGICVTECNVDQDCGAGRRCT 1317
H +DCG C R+G C VC P C T DC RC
Sbjct: 449 CVCHAGYSGEDCGVRSCPGDCRRRGRCESGRCVCWPGYTGRDCGTRA-CPGDCRGRGRCV 507
Query: 1318 SNGCGRVCSPPQGGGLCVNR-----CRGNWDCG----------AGEECIRKGCGRVCSPA 1452
C VC+P G C +R CRG CG GE+C ++ C R C
Sbjct: 508 DGRC--VCNPGFAGEDCGSRRCPGDCRGRGRCGDGVCSCDVGYEGEDCGKRSCPRGCQGR 565
Query: 1453 QEPVVGICV-DQCQRHWECGPRMRCVSTGCGHICSPAQDQVEQRPGKCPVLPKGTIG--- 1620
+ + G CV D +CG R C C+ Q V Q G C +G G
Sbjct: 566 GQCLEGRCVCDDGYEGEDCGVRR------CPRDCN--QRGVCQ-DGVCTCW-EGFAGEDC 615
Query: 1621 ---LCAEFCSGDDSCPSGQKCCSHG-CGHSCQT 1707
+C C C +G+ C G G SC T
Sbjct: 616 GLRVCPSNCHRRGRCENGRCVCDSGYTGPSCAT 648
Score = 91.7 bits (226), Expect = 2e-18
Identities = 141/533 (26%), Positives = 171/533 (32%), Gaps = 10/533 (1%)
Frame = +1
Query: 148 DCGAGRRCTSNGCGRVCSPIQQREACE-HQCREDRDCGGGHQCVRKGCGHVCAPVHQVD- 321
DCG G RC C VC P E C C RDC G C C +C P + D
Sbjct: 344 DCGEGGRCVDGRC--VCWPGYAGEDCSTRTC--PRDCRGPRGCEDGEC--ICDPGYSGDD 397
Query: 322 --VGICVMECRVDQDCGEGRLCISNGCGRVCFPVRRREACEHQCREDRDCGSGHQCVRRG 495
V C +C C +GR VC+P SG C R
Sbjct: 398 CGVRSCPSDCNQRGRCEDGRC--------VCWPGY----------------SGPDCGARA 433
Query: 496 CGHVCAPVHQVDVGICVTECRVD-QDCGEGRLCISNGCGRVCFPGRREGCEHQCREDRDC 672
C C + + G+CV +DCG C CR C
Sbjct: 434 CPRDCRGRGRCENGVCVCHAGYSGEDCGV------------------RSCPGDCRRRGRC 475
Query: 673 GSGHQCVRKGCGHVCAPVHQVGICVTECNVDQDCGEGRQCTSNGCGRVCSP-VQQEDVGI 849
SG +C VC P + C T G GR C C VC+P ED G
Sbjct: 476 ESG-RC-------VCWPGYTGRDCGTRACPGDCRGRGR-CVDGRC--VCNPGFAGEDCGS 524
Query: 850 --CVTECKVDQDCGEGRRCTSNGCGRVCSPVQQKEACEHQCREDRDCGSGHQCVRKGCGH 1023
C +C+ CG+G VCS C+ E DCG ++ C
Sbjct: 525 RRCPGDCRGRGRCGDG----------VCS-------CD-VGYEGEDCG------KRSCPR 560
Query: 1024 VCAPVHQVDVGICVTECKVDQDCGEGRRCASNGCGRVCSPAQQREACEHQC*EDKDCGSG 1203
C Q G CV + D EG C C R C+ QR C +D C
Sbjct: 561 GCQGRGQCLEGRCVCD-----DGYEGEDCGVRRCPRDCN---QRGVC-----QDGVCTCW 607
Query: 1204 HQCVRKGCGHVCSPIPQVGICVTECNVDQDCGAGR-RCTSNGCGRVCSPPQGGGLCVNRC 1380
+ CG + +C + C+ C GR C S G C+ C C
Sbjct: 608 EGFAGEDCG--------LRVCPSNCHRRGRCENGRCVCDSGYTGPSCAT----RTCPADC 655
Query: 1381 RGNWDCGAGEECIRKGCGRVCSPAQEPVVGICVDQCQRHWECGPRMRCVSTGCGHICSPA 1560
RG C G G +EP C CGPR C + C +C
Sbjct: 656 RGRGRCVQGVCVCHVGYSGEDCGQEEPPASACPG------GCGPRELCSAGQC--VC--- 704
Query: 1561 QDQVEQRPGKCPVLPKGTIGLCAEFCSGDDSCPSGQKCCSHG-CGHSCQTAVP 1716
VE G P I C C G C G C G G C VP
Sbjct: 705 ---VEGFRG-----PDCAIQTCPGDCRGRGECREGSCVCQDGYAGEDCGEEVP 749
>ref|NP_001071494.1| tenascin C [Bos taurus].
Length = 1746
Score = 90.9 bits (224), Expect = 4e-18
Identities = 142/541 (26%), Positives = 181/541 (33%), Gaps = 19/541 (3%)
Frame = +1
Query: 151 CGAGRRCTSNGCGRVCSPIQQREAC-EHQCREDRDCGGGHQCVRKGCGHVCAPVHQVDVG 327
C ++ GCG VC P + C E +C +C QC+ C VC H+ G
Sbjct: 161 CSGRGNFSTEGCGCVCEPGWKGPNCSEPEC--PGNCHLHGQCLDGQC--VC---HEGFTG 213
Query: 328 ICVMECRVDQDCGEGRLCISNGCGRVCFPVRRREACEHQCREDRDCGSGHQCVRRGCGHV 507
+ DC + C+ C VCF + SG C + C
Sbjct: 214 EDCGQLACPSDCNDQGKCVDGAC--VCF----------------EGYSGLDCSQETCPVP 255
Query: 508 CAPVHQVDVGICVTECRVDQDCGEGRLCISNGCGRVCFPGRREGCEHQCREDRDCGSGHQ 687
C+ H G CV V Q+ G C C C GR E++C D +G
Sbjct: 256 CSEEH----GRCVDGRCVCQEGFAGEDCREPLCLHNCH-GRGRCVENECVCDEGF-TGDD 309
Query: 688 CVRKGCGHVCAPVHQVGICVT-ECNVDQDCGEGRQCTSNGCGRVCSPVQQEDVGICV--- 855
C C + C G C+ C+ D+ G C C C + D G CV
Sbjct: 310 CGELVCPNDC---FDRGRCLNGTCSCDEGF-TGEDCGQLACPHACHGHGRCDEGQCVCDE 365
Query: 856 -------TECKVDQDCGEGRRCTSNGCGRVCSPVQQKEAC-EHQCREDRDCGSGHQCVRK 1011
+E + DC E RC C C+ C E QC RDC +CV
Sbjct: 366 GFAGPDCSERRCPSDCHERGRCVDGRC--ECNDGFTGADCGELQC--PRDCSGHGRCVNG 421
Query: 1012 GCGHVCAPVHQVDVGICVTEC---KVDQDCGEGRRCASNGCGRVCSPAQQREAC-EHQC* 1179
C VC D G +C + DC RC C C P Q + C E C
Sbjct: 422 QC--VC------DEGYTGEDCGQRQCPSDCHGRGRCVDGLC--ECQPGFQGDDCGEMSC- 470
Query: 1180 EDKDCGSGHQCVRKGCGHVCSPIPQVGICVTECNVDQDCGAGRRCTSNGCGRVCSPPQGG 1359
DC +CV C VC G E DC RC C VC G
Sbjct: 471 -PHDCHQHGRCVNGMC--VCDD-AYTGEDCRELRCPGDCSQRGRCVDGRC--VCEDGFAG 524
Query: 1360 GLCVN-RCRGNWDCGAGEECIRKGCGRVCSPAQEPVVGICVDQCQRHWECGPRMRCVSTG 1536
C + C GN C C+ C VC E G Q + +C + RCV
Sbjct: 525 PDCADLACPGN--CHGRGRCVDGQC--VC---LEGFTGPDCAQRRCPGDCHGQGRCVDGQ 577
Query: 1537 CGHICSPAQDQVEQRPGKCPVLPKGTIGLCAEFCSGDDSCPSGQKCCSHG-CGHSCQTAV 1713
C +C + CP CS C SG+ C+ G G C
Sbjct: 578 C--VCHEGFTGPDCAQRSCP-----------NDCSNWGQCVSGRCVCNEGYTGEDCSQVS 624
Query: 1714 P 1716
P
Sbjct: 625 P 625
Score = 74.7 bits (182), Expect = 3e-13
Identities = 113/435 (25%), Positives = 141/435 (32%), Gaps = 85/435 (19%)
Frame = +1
Query: 637 GCEHQCREDRD-----CGSGHQCVRKGCGHVCAPVHQVGICVT-----ECNVDQDCGEGR 786
GC Q E R C +GCG VC P + C C++ C +G
Sbjct: 145 GCCLQSAEGRVDTRPFCSGRGNFSTEGCGCVCEPGWKGPNCSEPECPGNCHLHGQCLDG- 203
Query: 787 QC------TSNGCGRVCSPVQQEDVGICVTECKVDQDCGEGRRCTSNGCGRVCSP----- 933
QC T CG++ P D G CV V + G C+ C CS
Sbjct: 204 QCVCHEGFTGEDCGQLACPSDCNDQGKCVDGACVCFEGYSGLDCSQETCPVPCSEEHGRC 263
Query: 934 -----VQQKEACEHQCRED---RDCGSGHQCVRKGCGHVCAPVHQVDVGICVTEC---KV 1080
V Q+ CRE +C +CV C VC D G +C
Sbjct: 264 VDGRCVCQEGFAGEDCREPLCLHNCHGRGRCVENEC--VC------DEGFTGDDCGELVC 315
Query: 1081 DQDCGEGRRCASNGCGRVCSPAQQRE-----ACEHQC*EDKDCGSGH----------QCV 1215
DC + RC + C C E AC H C C G C
Sbjct: 316 PNDCFDRGRCLNGTCS--CDEGFTGEDCGQLACPHACHGHGRCDEGQCVCDEGFAGPDCS 373
Query: 1216 RKGCGHVCSPIPQVGICV---TECNVDQDCGAGRRCTSNGCGRVCSPPQGGGLCVNRCRG 1386
+ C C + G CV ECN D G C C R CS G G CVN G
Sbjct: 374 ERRCPSDCH---ERGRCVDGRCECN---DGFTGADCGELQCPRDCS---GHGRCVN---G 421
Query: 1387 NWDCG---AGEECIRKGCGRVCSPAQEPVVGICVDQCQRHW------------ECGPRMR 1521
C GE+C ++ C C V G+C +CQ + +C R
Sbjct: 422 QCVCDEGYTGEDCGQRQCPSDCHGRGRCVDGLC--ECQPGFQGDDCGEMSCPHDCHQHGR 479
Query: 1522 CVSTGCGHICSPAQDQVEQRPGKCP--------------VLPKGTIG------LCAEFCS 1641
CV+ C +C A + R +CP V G G C C
Sbjct: 480 CVNGMC--VCDDAYTGEDCRELRCPGDCSQRGRCVDGRCVCEDGFAGPDCADLACPGNCH 537
Query: 1642 GDDSCPSGQKCCSHG 1686
G C GQ C G
Sbjct: 538 GRGRCVDGQCVCLEG 552
Score = 74.7 bits (182), Expect = 3e-13
Identities = 126/459 (27%), Positives = 158/459 (34%), Gaps = 44/459 (9%)
Frame = +1
Query: 109 DVGICVTECKVDQDCGAGRRCTSNGCGRVCSP-----IQQREACEH-----QCRED---R 249
D G CV V + +G C+ C CS + R C+ CRE
Sbjct: 227 DQGKCVDGACVCFEGYSGLDCSQETCPVPCSEEHGRCVDGRCVCQEGFAGEDCREPLCLH 286
Query: 250 DCGGGHQCVRKGCGHVCAPVHQVDVGICVMECRVDQDCGEGRLCISNGCGRVCFPVRRRE 429
+C G +CV C VC D G DCGE C CF R
Sbjct: 287 NCHGRGRCVENEC--VC------DEGF------TGDDCGE------LVCPNDCFD--RGR 324
Query: 430 ACEHQCREDRDCGSGHQCVRRGCGHVCAPVHQVDVGICV----------TECRVDQDCGE 579
C D +G C + C H C + D G CV +E R DC E
Sbjct: 325 CLNGTCSCDEGF-TGEDCGQLACPHACHGHGRCDEGQCVCDEGFAGPDCSERRCPSDCHE 383
Query: 580 GRLCISNGCG-RVCFPGRREGCEHQCREDRDCGSGHQCVRKGCGHVCAPVHQVGICVTEC 756
C+ C F G G E QC RDC +CV C VC E
Sbjct: 384 RGRCVDGRCECNDGFTGADCG-ELQC--PRDCSGHGRCVNGQC--VC----------DEG 428
Query: 757 NVDQDCGEGRQCTSNGCGR--------VCSP-VQQEDVGICVTECKVDQDCGEGRRCTSN 909
+DCG+ RQC S+ GR C P Q +D G E DC + RC +
Sbjct: 429 YTGEDCGQ-RQCPSDCHGRGRCVDGLCECQPGFQGDDCG----EMSCPHDCHQHGRCVNG 483
Query: 910 GCGRVCSPVQQKEACEHQCREDRDCGSGHQCVRKGC-------GHVCA----PVHQVDVG 1056
C VC E C + R DC +CV C G CA P + G
Sbjct: 484 MC--VCDDAYTGEDC-RELRCPGDCSQRGRCVDGRCVCEDGFAGPDCADLACPGNCHGRG 540
Query: 1057 ICVTECKVDQDCGEGRRCASNGCGRVCSPAQQREACEHQC*EDKDCGSGHQCVRKGCGHV 1236
CV V + G CA C C Q + QC + +G C ++ C +
Sbjct: 541 RCVDGQCVCLEGFTGPDCAQRRCPGDCH--GQGRCVDGQC-VCHEGFTGPDCAQRSCPND 597
Query: 1237 CSPIPQVGICVTECNVDQDCGAGRRCTSNGCGRVCSPPQ 1353
CS G CV+ C T C +V SPP+
Sbjct: 598 CS---NWGQCVS-----GRCVCNEGYTGEDCSQV-SPPK 627
>ref|XP_002695670.1| PREDICTED: extracellular peptidase inhibitor-like [Bos taurus].
Length = 146
Score = 83.6 bits (205), Expect = 6e-16
Identities = 32/47 (68%), Positives = 38/47 (80%)
Frame = +1
Query: 1573 EQRPGKCPVLPKGTIGLCAEFCSGDDSCPSGQKCCSHGCGHSCQTAV 1713
+Q G CP +PKGT+G+C E CSGDDSCP G KCCS+GCGH C+TAV
Sbjct: 30 QQELGFCPEVPKGTVGICVEMCSGDDSCPEGMKCCSNGCGHVCKTAV 76
Score = 49.7 bits (117), Expect = 1e-05
Identities = 21/40 (52%), Positives = 23/40 (57%)
Frame = +1
Query: 1027 CAPVHQVDVGICVTECKVDQDCGEGRRCASNGCGRVCSPA 1146
C V + VGICV C D C EG +C SNGCG VC A
Sbjct: 36 CPEVPKGTVGICVEMCSGDDSCPEGMKCCSNGCGHVCKTA 75
>ref|XP_002702143.1| PREDICTED: mCG55370-like [Bos taurus].
Length = 93
Score = 83.6 bits (205), Expect = 6e-16
Identities = 32/47 (68%), Positives = 38/47 (80%)
Frame = +1
Query: 1573 EQRPGKCPVLPKGTIGLCAEFCSGDDSCPSGQKCCSHGCGHSCQTAV 1713
+Q G CP +PKGT+G+C E CSGDDSCP G KCCS+GCGH C+TAV
Sbjct: 30 QQELGFCPEVPKGTVGICVEMCSGDDSCPEGMKCCSNGCGHVCKTAV 76
Score = 50.1 bits (118), Expect = 7e-06
Identities = 22/44 (50%), Positives = 25/44 (56%)
Frame = +1
Query: 1027 CAPVHQVDVGICVTECKVDQDCGEGRRCASNGCGRVCSPAQQRE 1158
C V + VGICV C D C EG +C SNGCG VC A R+
Sbjct: 36 CPEVPKGTVGICVEMCSGDDSCPEGMKCCSNGCGHVCKTAVFRK 79
>ref|NP_001192207.1| extracellular peptidase inhibitor [Bos taurus].
Length = 93
Score = 79.7 bits (195), Expect = 9e-15
Identities = 33/54 (61%), Positives = 41/54 (75%)
Frame = +1
Query: 1552 SPAQDQVEQRPGKCPVLPKGTIGLCAEFCSGDDSCPSGQKCCSHGCGHSCQTAV 1713
SP + Q ++PG CP +PKGT+G+CAE CSGD SCP KCCS+GCGH C+ AV
Sbjct: 25 SPVKGQ--RKPGFCPEVPKGTVGICAELCSGDYSCPGRAKCCSNGCGHVCKAAV 76
>ref|NP_001094770.1| platelet endothelial aggregation receptor 1 [Bos taurus].
Length = 1040
Score = 79.0 bits (193), Expect = 1e-14
Identities = 131/541 (24%), Positives = 164/541 (30%), Gaps = 62/541 (11%)
Frame = +1
Query: 151 CGAGRRCTSNGCGRVCSPIQQREACEHQCREDRDCGGGHQCVRKGCGHVCAPVHQVDVGI 330
C T C C C +CR C G C R CAP + D
Sbjct: 248 CSCPPGWTGTICSLPCPEGFHGPNCSQECR----CHNGGLCDRFTGQCRCAPGYTGDR-- 301
Query: 331 CVMEC---RVDQDCGEGRLCISNGCGRVCFPVRRREACEH-----QCREDRDCGSGHQCV 486
C EC R QDC E C G CFP CEH +C E R C G +
Sbjct: 302 CREECPVGRFGQDCAETCDCAP---GARCFPANGACLCEHGFTGDRCAE-RLCPDGLYGL 357
Query: 487 RRGCGHVCAPVHQVDVGICVTECRVDQDCGEGRLCISNGCGRVCFPGRREGCEHQ----- 651
C P H + EC C+ G C E C
Sbjct: 358 SCQVPCTCDPEHSLSCHPMSGECS----------CLPGWAGLHC----NESCPQDTHGPG 403
Query: 652 CREDRDCGSGHQCVRKGCGHVCAPVHQVGICVTECNVDQ---DCGEGRQCTSNGCGRVCS 822
C+E C G C CAP + C + C D +C + C + CS
Sbjct: 404 CQEHCLCLHGGVCQPDSGLCRCAPGYTGPHCASLCPPDTYGVNCSQRCSCEN---AIACS 460
Query: 823 PVQQEDVGICVTE--------------------CKVDQDCGEGRRCTSNGCGRVCSPVQQ 942
P+ G CV + C C C+ C+P
Sbjct: 461 PID----GTCVCKEGWQRGNCSVPCPPGTWGFGCNASCQCAHEAACSPQTGACTCTPGWH 516
Query: 943 KEACEHQCREDRDCGSGHQCV-RKGCGHV--CAPVH---QVDVGICVTECKVDQDCGEG- 1101
C+ C + + G C R C H C PVH Q G T C Q C EG
Sbjct: 517 GTNCQLPCPKGQ---FGEGCASRCDCDHADGCDPVHGHCQCQAGWTGTRCH--QPCPEGF 571
Query: 1102 ------RRCASNGCGR--------VCSPAQQREACEHQC*EDKDCGSGHQCVRKGCGHVC 1239
CA G VC+P + C+ C + G +CV C +
Sbjct: 572 WGANCSNACACRNGGTCIPKNGNCVCAPGFRGPFCQKSCQPGR---YGKRCVPCKCANHS 628
Query: 1240 SPIPQVGICVTECNVDQDCGAGRRCTSNGCGRVCSPPQGGGLCVN--RCRGNWDCGAGEE 1413
S P G C C AG T C + C G C +CR C +
Sbjct: 629 SCHPSNGTCY--------CLAG--WTGPDCSQPCPLGHWGANCAQLCQCRHGGTCHPQDG 678
Query: 1414 ---CIRKGCGRVCSPAQEPVVGICVDQCQRHWECGPRMRCVSTGCGHICSPAQDQVEQRP 1584
C G +C P G+ C + +CGP RC +C P R
Sbjct: 679 SCFCPPGWTGHLCLEGCSP--GMFGANCSQPCQCGPGERCHPETGACVCPPGHSGAPCRI 736
Query: 1585 G 1587
G
Sbjct: 737 G 737
Score = 53.9 bits (128), Expect = 5e-07
Identities = 97/432 (22%), Positives = 127/432 (29%), Gaps = 43/432 (9%)
Frame = +1
Query: 547 TECRVDQDCGEGRLCISNGCGRVCFPGRREGCEH-QCREDRDCGSGHQCVRKGCGHVCAP 723
TE R+ C G C +C + C H +C C QCV+ G C+
Sbjct: 82 TEHRMRLQCCRGFYESRGACVPLC----AQECVHGRCVAPNQC----QCVQDWRGDDCSS 133
Query: 724 VHQVGICVTECNVDQDCGEGRQCTSNG-------------CGRVCSPVQQEDVGICVTEC 864
G+ +C+ +CG C C + CSP G+ C
Sbjct: 134 ACAPGVWGPKCDKPCNCGNSSSCDPKSGACSCPSGLQPPHCLQPCSP------GLYGPAC 187
Query: 865 KVDQDCGEGRRCTSNGCGRVCSPVQQKEACEHQCREDR---DCGSGHQCVRKGCGHVCAP 1035
+ C G C +C P + CE C C S C G
Sbjct: 188 QFSCQC-HGAPCNPQTGACLCPPERTGPTCEVSCSPSSVGFSCPSTPPCQNGGVFQASQD 246
Query: 1036 VHQVDVGICVTECKV-------DQDCGEGRRCASNG-CGRV-----CSPAQQREACEHQ- 1173
G T C + +C + RC + G C R C+P + C +
Sbjct: 247 SCSCPPGWTGTICSLPCPEGFHGPNCSQECRCHNGGLCDRFTGQCRCAPGYTGDRCREEC 306
Query: 1174 --------C*EDKDCGSGHQCVRKGCGHVCSPIPQVGICVTECNVDQDCGAGRRCTSNGC 1329
C E DC G +C P G C+ E D A R C
Sbjct: 307 PVGRFGQDCAETCDCAPGARC-----------FPANGACLCEHGFTGDRCAERLCPDGLY 355
Query: 1330 GRVCSPP----QGGGLCVNRCRGNWDCGAGEECIRKGCGRVCSPAQEPVVGICVDQCQRH 1497
G C P L + G C G + C C P G CQ H
Sbjct: 356 GLSCQVPCTCDPEHSLSCHPMSGECSCLPGWAGLH--CNESC-PQDTHGPG-----CQEH 407
Query: 1498 WECGPRMRCVSTGCGHICSPAQDQVEQRPGKCPVLPKGTIGLCAEFCSGDDSCPSGQKCC 1677
C G +C P G C P T CA C D + C
Sbjct: 408 CLCLH---------GGVCQPDS-------GLCRCAPGYTGPHCASLCPPDTYGVN----C 447
Query: 1678 SHGCGHSCQTAV 1713
S C SC+ A+
Sbjct: 448 SQRC--SCENAI 457
>ref|XP_002694223.1| PREDICTED: multiple epidermal growth factor-like domains 6-like [Bos
taurus].
Length = 1517
Score = 79.0 bits (193), Expect = 1e-14
Identities = 144/599 (24%), Positives = 183/599 (30%), Gaps = 74/599 (12%)
Frame = +1
Query: 118 ICVTECKVD---QDCGAGRRCTSNG-CGRV-----CSPIQQREACEHQCRED---RDCGG 261
+C C D ++C C + G C V C P CE C + + C
Sbjct: 545 VCNETCPPDTFGKNCSFSCSCQNGGTCDPVTGACRCPPGVGGAHCEDGCPKGFYGKHCRK 604
Query: 262 GHQCVRKGCGHVCAPVHQVDVGI-----------------CVMECRVDQDCGEGRLCISN 390
C +G H D G+ C EC+ +Q R C
Sbjct: 605 KCHCANRGRCHRLYGACLCDPGLYGRFCHLACPPWAFGPGCSEECKCEQQ--NTRACDKR 662
Query: 391 GCGRVCFPVRRREACEHQC---------REDRDCGSGHQC--VRRGCGHVC-APVHQVDV 534
C R E C+ +C R+ C G C V CG C A H D
Sbjct: 663 DGSCACKAGFRGEWCQDECQPGFFGPGCRQACTCPPGVACDPVSGECGKQCPAGYHGEDC 722
Query: 535 GICVTECRVDQDCGEGRLCISNGCGRV-----CFPGRR-EGCEHQCREDRDCGSGHQCVR 696
G Q+C C C RV C PGR + C C E R
Sbjct: 723 GQECPAGTFGQNCSGSCSCGDAPCDRVTGQCLCPPGRTGDDCGADCPEGR--------WG 774
Query: 697 KGCGHVCAPVHQVGICVTECNVDQDCGEGRQCTSNGCGRVCSPVQQEDVGICVTECKVDQ 876
GC +C P CV E C G + C C P G C T+C
Sbjct: 775 LGCQEICPPCEHGAACVPETGACL-CRPG--FMGSRCQDAC-PAGWFGPG-CQTQCSCAN 829
Query: 877 D---------CGEGRRCTSNGCGRVCSPVQQKEACEHQCREDRDCGSGHQCVRKGCGHVC 1029
D C T C R C C C +C +GH GC V
Sbjct: 830 DGLCHPVTGRCSCAPGWTGLSCQRACDSGHWGPDCSFTC----NCSAGH----GGCDAVS 881
Query: 1030 APVHQVDVGICVTEC-----KVDQDCGEGRRCASNGCGRVCSPAQQREACEHQC*EDKDC 1194
G+CV E + +Q C +G GCGR C + AC+H
Sbjct: 882 --------GLCVCEAGYVGPRCEQRCPQG--YFGPGCGRQCQ-CEHGAACDH-------V 923
Query: 1195 GSGHQCVRKGCGHVCSPIPQVGICVTECNVDQDCGAGRRCTSNGCGRVCSPPQGGGLCVN 1374
C G C G +C DC AG C +C + G C
Sbjct: 924 SGACTCPAGWRGTFCERACPAGFFGVDCGHACDCSAGVPCDPVSGSCLCPSGRQGPRCAQ 983
Query: 1375 RCRGNWDCGAGEECIRKGCGRVCSPAQEPVVGICVDQCQRHWECGPRMRCVSTG-----C 1539
C + G C + C + +PV G C +C W ++ G C
Sbjct: 984 TCPAHM---FGHNC-SQACSCFNGASCDPVHGQC--RCGPGWTGPTCLQACPEGLYGEDC 1037
Query: 1540 GHICSPAQDQVEQRPGKC-PV-----LPKGTIGLCAEFCSGDDSCPSG--QKCCSHGCG 1692
H C + Q G C PV P+G GL E C G + C H CG
Sbjct: 1038 QHSC------LCQNGGSCDPVSGHCTCPEGWAGLACE-----KECLPGVFEVGCPHSCG 1085
Score = 77.0 bits (188), Expect = 6e-14
Identities = 149/638 (23%), Positives = 202/638 (31%), Gaps = 118/638 (18%)
Frame = +1
Query: 151 CGAGRRCTSNGCGRVCSPIQQ----REACEHQCRE-----DRDCGGGHQCV--RKGC--- 288
C AG R +++GCG C + + R CEH C C G+Q R+GC
Sbjct: 392 CYAGYRLSADGCG--CEDVDECASGRGGCEHHCANLAGSFQCSCEAGYQLDEDRRGCTSL 449
Query: 289 --------GHVCAPVHQVDVGICVM--------------------ECRVDQDCGEGRLCI 384
GH+ P+ + + + V+ E R + E +C+
Sbjct: 450 ELPELVLDGHL--PLGRPPLHVAVLQDELPHLFQDDYVGAEEEEAEARGEHTLQEKYVCL 507
Query: 385 SN----GCGRVCFPVRRREACEHQCREDRDCGSGHQCVRRGCGHVCAPVHQVDVGICVTE 552
+ C C R C + DC G + C C P
Sbjct: 508 DDTFGPDCSLTCDDCRNGGTCLPTL-DSCDCPDGWTGLV--CNETCPP------DTFGKN 558
Query: 553 CRVDQDCGEGRLC--ISNGCGRVCFPGR-----REGCEH-----QCREDRDCGSGHQCVR 696
C C G C ++ C C PG +GC CR+ C + +C R
Sbjct: 559 CSFSCSCQNGGTCDPVTGACR--CPPGVGGAHCEDGCPKGFYGKHCRKKCHCANRGRCHR 616
Query: 697 KGCGHVCAPVHQVGICVTECNVDQDCGEGRQCTSNGCGRVCSPVQQEDVGICVTECKVDQ 876
+C P C C GC C +Q++ C K D
Sbjct: 617 LYGACLCDPGLYGRFCHLACPP--------WAFGPGCSEECK-CEQQNTRACD---KRDG 664
Query: 877 DCGEGRRCTSNGCGRVCSPVQQKEACEHQCREDRDCGSGHQC--VRKGCGHVC-APVHQV 1047
C C + G C Q CR+ C G C V CG C A H
Sbjct: 665 SCA----CKAGFRGEWCQDECQPGFFGPGCRQACTCPPGVACDPVSGECGKQCPAGYHGE 720
Query: 1048 DVGICVTECKVDQDCGEGRRCASNGCGRV-----CSPAQQREACEHQC*EDKDCGSGHQC 1212
D G Q+C C C RV C P + + C C E + G G Q
Sbjct: 721 DCGQECPAGTFGQNCSGSCSCGDAPCDRVTGQCLCPPGRTGDDCGADCPEGR-WGLGCQE 779
Query: 1213 VRKGCGHVCSPIPQVGICVTE-----CNVDQDCGAGR---------RCTSNGC-----GR 1335
+ C H + +P+ G C+ C AG C ++G GR
Sbjct: 780 ICPPCEHGAACVPETGACLCRPGFMGSRCQDACPAGWFGPGCQTQCSCANDGLCHPVTGR 839
Query: 1336 V-CSPPQGGGLCVNRC-RGNW--DCGAGEECI--RKGCGRV---CSPAQEPVVGICVDQC 1488
C+P G C C G+W DC C GC V C V C +C
Sbjct: 840 CSCAPGWTGLSCQRACDSGHWGPDCSFTCNCSAGHGGCDAVSGLCVCEAGYVGPRCEQRC 899
Query: 1489 QRHW---ECGPRMRCV-STGCGHICSPAQDQVEQRPGKCP-VLPKGTIGL-CAEFC---- 1638
+ + CG + +C C H+ R C P G G+ C C
Sbjct: 900 PQGYFGPGCGRQCQCEHGAACDHVSGACTCPAGWRGTFCERACPAGFFGVDCGHACDCSA 959
Query: 1639 -------SGDDSCPSG-------QKCCSHGCGHSCQTA 1710
SG CPSG Q C +H GH+C A
Sbjct: 960 GVPCDPVSGSCLCPSGRQGPRCAQTCPAHMFGHNCSQA 997
Score = 73.6 bits (179), Expect = 6e-13
Identities = 124/524 (23%), Positives = 157/524 (29%), Gaps = 47/524 (8%)
Frame = +1
Query: 139 VDQDCGAGRRCTSNGCGRVCSPIQQREACEHQC--REDRDCG--GGHQCVRKG-----CG 291
V C G T C + C E C+H C + C GH +G C
Sbjct: 1009 VHGQCRCGPGWTGPTCLQACPEGLYGEDCQHSCLCQNGGSCDPVSGHCTCPEGWAGLACE 1068
Query: 292 HVCAPVHQVDVGICVMECRVDQDCGEGRLC-------------ISNGCGRVCFPVRRREA 432
C P G+ + C C G LC + C C P EA
Sbjct: 1069 KECLP------GVFEVGCPHSCGCLNGGLCDPHTVHCLCPAGWTGDKCQSSCPPSWFGEA 1122
Query: 433 CEHQCREDRDCGSGHQCVRRGCGHVCAPVHQVDVGICVTECRVDQDCGEGRLCISNGCGR 612
C +C+ C G C HV H G C +Q C G CG+
Sbjct: 1123 CAQRCQ----CPPG-----AACHHVTGECH-CPPGFTGPSC--EQACPPGTF--GERCGQ 1168
Query: 613 VCF-PGRREGCEHQCREDRDCGSGHQCVRKGCGHVCAPVHQVGICVTECNVDQDCGEGRQ 789
C PG + C H C G+ GC C P C C C G
Sbjct: 1169 QCHCPGENQAC-HPASGTCACAPGYHGA--GCQQRCPPGRFGPGCELLCG----CLNGGS 1221
Query: 790 CTS-NGCGRVCSPVQQEDVGICVTE------CKVDQDCGEGRRCTSNGCGRVCSPVQQKE 948
C + G R + D + C CG+G C C P +
Sbjct: 1222 CDAVTGACRCPAGFLGTDCSLACPHGRFGPGCAYVCGCGQGAACDPVTGSCSCPPGRTGV 1281
Query: 949 ACEHQCREDR---------DCGSGHQCVRK----GCGHVCAPVH---QVDVGICVTECKV 1080
CEH C ++R C +G C CG H G C +
Sbjct: 1282 HCEHGCPQNRFGVNCEHACSCRNGGLCHATNGSCSCGLGWTGPHCELACPAGRYGAACSL 1341
Query: 1081 DQDCGEGRRCASNGCGRVCSPAQQREACEHQC*EDKDCGSGHQCVRKGCGHVCSPIPQVG 1260
+ C C C P +ACEH C Q + G C P+ G
Sbjct: 1342 ECSCHNHGACEPTSGACRCGPGFYGQACEHSCPPGFHGAGCQQTCQCQHGAPCDPVS--G 1399
Query: 1261 ICVTECNVDQDCGAGRRCTSNGCGRVCSPPQGGGLCVNRCRGNWDCGAGEECIRKGCGRV 1440
C+ C AG C R C P G C +C DC G C +
Sbjct: 1400 QCL--------CPAGLH--GQFCERGCEPGSFGEGCGQQC----DCELGVPCDPVTGHCL 1445
Query: 1441 CSPAQEPVVGICVDQCQR-HWECGPRMRCVSTGCGHICSPAQDQ 1569
C P + C C+R + G + C S G G C P Q
Sbjct: 1446 CPPGRTGTT--CDLGCRRGFFGPGCALHC-SCGGGADCDPVSGQ 1486
Score = 73.2 bits (178), Expect = 8e-13
Identities = 136/606 (22%), Positives = 176/606 (29%), Gaps = 85/606 (14%)
Frame = +1
Query: 151 CGAGRRCTSNGCGRVCSPIQQREACEHQCREDRDCGGGHQCVRKGCGHVCAPVHQVDVGI 330
C AG ++G R C I+ + C D G H C G VC H ++
Sbjct: 306 CNAGYELGADG--RQCYRIEMEIV--NSCEADNG-GCSHGCSHSSAGPVCTCPHGYELDE 360
Query: 331 CVMECRVDQDCGEGRLC---ISNGCGRV---CFPVRRREACEHQCREDRDCGSGHQCVRR 492
C DC C +N G C+ R A C + +C SG R
Sbjct: 361 DQRTCIDVDDCAASPCCQQVCTNSPGGYECSCYAGYRLSADGCGCEDVDECASG----RG 416
Query: 493 GCGHVCAPVHQVDVGICVTECRVDQDCGEGRLCISNGCGRVCFPGR-------------R 633
GC H CA + C ++D+D R C S + G +
Sbjct: 417 GCEHHCANLAGSFQCSCEAGYQLDED---RRGCTSLELPELVLDGHLPLGRPPLHVAVLQ 473
Query: 634 EGCEHQCREDRDCGSGHQCVRKG------------------CGHVCAPVHQVGICVTECN 759
+ H ++D + +G C C G C+ +
Sbjct: 474 DELPHLFQDDYVGAEEEEAEARGEHTLQEKYVCLDDTFGPDCSLTCDDCRNGGTCLPTLD 533
Query: 760 VDQDCGEGRQCTSNGCGRVCSPVQQEDVGICVTECKVDQDCGEGRRCTSNGCGRVCSPVQ 939
DC +G T C C P + G C C G C C P
Sbjct: 534 -SCDCPDG--WTGLVCNETCPP---DTFG---KNCSFSCSCQNGGTCDPVTGACRCPPGV 584
Query: 940 QKEACEHQCRED---RDCGSGHQCVRKGCGHVCAPVHQVDVGI----------------- 1059
CE C + + C C +G H D G+
Sbjct: 585 GGAHCEDGCPKGFYGKHCRKKCHCANRGRCHRLYGACLCDPGLYGRFCHLACPPWAFGPG 644
Query: 1060 CVTECKVDQDCGEGRRCASNGCGRVCSPAQQREACEHQC*---------EDKDCGSGHQC 1212
C ECK +Q R C C + E C+ +C + C G C
Sbjct: 645 CSEECKCEQQ--NTRACDKRDGSCACKAGFRGEWCQDECQPGFFGPGCRQACTCPPGVAC 702
Query: 1213 --VRKGCGHVCSPIPQVGICVTEC---NVDQDCGAGRRCTSNGCGRV-----CSPPQGGG 1362
V CG C C EC Q+C C C RV C P + G
Sbjct: 703 DPVSGECGKQCPAGYHGEDCGQECPAGTFGQNCSGSCSCGDAPCDRVTGQCLCPPGRTGD 762
Query: 1363 LCVNRC-RGNWDCGAGEECIRKGCGRVCSPAQEPVV-------GICVDQCQRHWECGPRM 1518
C C G W G E C G C P + C D C W GP
Sbjct: 763 DCGADCPEGRWGLGCQEICPPCEHGAACVPETGACLCRPGFMGSRCQDACPAGW-FGP-- 819
Query: 1519 RCVSTGCGHICSPAQDQV-EQRPGKCPVLPKGTIGLCAEFCSGDDSCPSGQKCCSHGCGH 1695
GC CS A D + G+C P T C C P C+ GH
Sbjct: 820 -----GCQTQCSCANDGLCHPVTGRCSCAPGWTGLSCQRACDSGHWGPDCSFTCNCSAGH 874
Query: 1696 SCQTAV 1713
AV
Sbjct: 875 GGCDAV 880
Score = 72.0 bits (175), Expect = 2e-12
Identities = 144/623 (23%), Positives = 199/623 (31%), Gaps = 100/623 (16%)
Frame = +1
Query: 133 CKVDQDCGAGRRCTSNGCGRVCSPI---QQREAC--EHQCREDRDCGGGHQCVRK----- 282
C C G + GC C + Q R C E Q +ED G +CVR+
Sbjct: 195 CLAINSCAVG----NGGCQHNCVQLTVTQHRCQCRPEFQLQED-----GRRCVRRNPCAD 245
Query: 283 ---GCGHVCAPVHQVDVGICVMECR------VDQ-------DCGEGRLCISNGC------ 396
GC H C + G+ ECR VD+ +C G ++GC
Sbjct: 246 RNGGCMHRCRALR----GLAHCECRAGYQLAVDRKACEDVDECATGLAQCAHGCLNTHGS 301
Query: 397 --------------GRVCFPVRRREACEHQCREDRDCGSGHQCVRRGCGHVCAPVHQVDV 534
GR C+ + + C D G H C G VC H ++
Sbjct: 302 FKCVCNAGYELGADGRQCYRIEMEIV--NSCEADNG-GCSHGCSHSSAGPVCTCPHGYEL 358
Query: 535 GICVTECRVDQDCGEGRLC---ISNGCGRV---CFPGRR---EGCEHQCREDRDCGSGHQ 687
C DC C +N G C+ G R +GC C + +C SG
Sbjct: 359 DEDQRTCIDVDDCAASPCCQQVCTNSPGGYECSCYAGYRLSADGC--GCEDVDECASG-- 414
Query: 688 CVRKGCGHVCAPVHQVGICVTECNVDQDCGEGRQCTSNGCGRVC----SPVQQEDVGICV 855
R GC H CA + C E D + R CTS + P+ + + + V
Sbjct: 415 --RGGCEHHCANLAGSFQCSCEAGYQLD-EDRRGCTSLELPELVLDGHLPLGRPPLHVAV 471
Query: 856 TECKV-----------DQDCGEGRRCTSNGCGRVCSPVQQKEACEHQCREDRDCGS---- 990
+ ++ +++ E R + VC C C + R+ G+
Sbjct: 472 LQDELPHLFQDDYVGAEEEEAEARGEHTLQEKYVCLDDTFGPDCSLTCDDCRNGGTCLPT 531
Query: 991 --GHQCVRKGCGHVCAPVHQVDVGICVTECKVDQDCGEGRRCASNGCGRVCSPAQQREAC 1164
C G VC D C C G C C P C
Sbjct: 532 LDSCDCPDGWTGLVCNETCPPDT--FGKNCSFSCSCQNGGTCDPVTGACRCPPGVGGAHC 589
Query: 1165 EHQC*E---DKDCGSGHQCVRKGCGH------VCSPIPQVGICVTEC---NVDQDCGAGR 1308
E C + K C C +G H +C P C C C
Sbjct: 590 EDGCPKGFYGKHCRKKCHCANRGRCHRLYGACLCDPGLYGRFCHLACPPWAFGPGCSEEC 649
Query: 1309 RCTSNGCGRVCSPPQGGGLCVNRCRGNW---DCGAGEECIRKGCGRVCS----PAQEPVV 1467
+C R C G C RG W +C G GC + C+ A +PV
Sbjct: 650 KCEQQNT-RACDKRDGSCACKAGFRGEWCQDECQPG--FFGPGCRQACTCPPGVACDPVS 706
Query: 1468 GICVDQCQRHW---ECGPRMRCVSTG--CGHICSPAQDQVEQRPGKCPVLPKGTIGLCAE 1632
G C QC + +CG + G C CS ++ G+C + P G G +
Sbjct: 707 GECGKQCPAGYHGEDCGQECPAGTFGQNCSGSCSCGDAPCDRVTGQC-LCPPGRTG---D 762
Query: 1633 FCSGDDSCPSGQKCCSHGCGHSC 1701
C D CP G+ GC C
Sbjct: 763 DCGAD--CPEGR--WGLGCQEIC 781
Score = 55.5 bits (132), Expect = 2e-07
Identities = 94/402 (23%), Positives = 137/402 (34%), Gaps = 27/402 (6%)
Frame = +1
Query: 571 CGEGRLCISNGCGRVCFPGRREGCEHQCREDRDC--GSGHQCVRKGCGHVCAPVHQVGIC 744
CG C+S+ V + G R+ + + C G Q +GC +PV G+C
Sbjct: 72 CGRQAWCVSHERRTVYYTGYRQVYSTEAQTVFRCCPGWSQQPGSQGC---LSPVCSSGLC 128
Query: 745 VTECNVDQDCGEGRQCTSNGCGRVCSPVQQEDVGICVTECKVDQDCGEGRRC--TSNGCG 918
+ + +C S G C Q DV EC+V G RC T
Sbjct: 129 FNGGHCVSGSAQPCRCPSGFQGPRC----QHDVD----ECQVHNG-GCQHRCVNTPGSYF 179
Query: 919 RVCSPVQQKEACEHQCREDRDCGSGHQCVRKGCGHVCAPVHQVDVGICVTECKVDQDCGE 1098
C P + A C C G+ + C + H+ C E ++ +D
Sbjct: 180 CECKPGFRLHADGRTCLAINSCAVGNGGCQHNCVQLTVTQHRCQ---CRPEFQLQED--- 233
Query: 1099 GRRCASNGCGRVCSPAQQREACEHQC*EDKDCGSGHQC-VRKGCGHV-CSPIPQVGICVT 1272
GRRC +R C D++ G H+C +G H C
Search to RefSeqHP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ITT01_0011_G11
(1989 letters)
Database: RefSeq49_HP.fasta
32,964 sequences; 18,297,164 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_061978.6| tenascin-X isoform 1 precursor [Homo sapiens]. 117 5e-26
Alignment gi|NP_542181.1| WAP four-disulfide core domain protein 3 precur... 97 4e-20
Alignment gi|NP_002151.2| tenascin precursor [Homo sapiens]. 86 1e-16
Alignment gi|NP_941960.1| keratin-associated protein 10-4 [Homo sapiens]. 84 6e-16
Alignment gi|NP_004516.2| low-density lipoprotein receptor-related protei... 82 2e-15
Alignment gi|NP_002323.2| prolow-density lipoprotein receptor-related pro... 82 2e-15
Alignment gi|NP_115821.2| multiple epidermal growth factor-like domains p... 80 5e-15
Alignment gi|NP_941961.2| keratin-associated protein 10-6 [Homo sapiens]. 77 8e-14
Alignment gi|NP_941962.1| keratin-associated protein 10-7 [Homo sapiens]. 76 1e-13
Alignment gi|NP_001400.3| multiple epidermal growth factor-like domains p... 75 2e-13
>ref|NP_061978.6| tenascin-X isoform 1 precursor [Homo sapiens].
Length = 4242
Score = 117 bits (292), Expect = 5e-26
Identities = 163/617 (26%), Positives = 201/617 (32%), Gaps = 83/617 (13%)
Frame = +1
Query: 115 GICVTECKVDQDCGAGRRC-----TSNGCGRVCSP--IQQREACEHQCREDRDCGGGHQC 273
G C +C C GR T CG P Q R C R G C
Sbjct: 185 GSCPDDCNDQGRCVRGRCVCFPGYTGPSCGWPSCPGDCQGRGRCVQGVCVCRAGFSGPDC 244
Query: 274 VRKGCGHVCAPVHQVDVGICVMECR-VDQDCGEGRLCISNGCGRVCFPVRRREACEHQCR 450
++ C C+ + + G CV + DCG C R C +R CE+
Sbjct: 245 SQRSCPRGCSQRGRCEGGRCVCDPGYTGDDCG------MRSCPRGC---SQRGRCENGRC 295
Query: 451 EDRDCGSGHQCVRRGCGHVCAPVHQVDVGICVTE-------CRVDQ---DCGEGRLCISN 600
+G C R C C+ + G CV + C DCGEG C+
Sbjct: 296 VCNPGYTGEDCGVRSCPRGCSQRGRCKDGRCVCDPGYTGEDCGTRSCPWDCGEGGRCVDG 355
Query: 601 GCGRVCFPG------RREGCEHQCREDRDCGSGHQCVRKG-CGHVCAPVHQVGICVTECN 759
C VC+PG C CR C G G G C V C +CN
Sbjct: 356 RC--VCWPGYTGEDCSTRTCPRDCRGRGRCEDGECICDTGYSGDDCG----VRSCPGDCN 409
Query: 760 VDQDCGEGR----------QCTSNGCGRVCSPVQQEDVGICVTECKVD-QDCG------- 885
C +GR C S C R C + + G+CV +DCG
Sbjct: 410 QRGRCEDGRCVCWPGYTGTDCGSRACPRDCRGRGRCENGVCVCNAGYSGEDCGVRSCPGD 469
Query: 886 -EGR-RCTSNGC-------GRVCSPVQQKEACEHQCREDRDCG----------SGHQCVR 1008
GR RC S C GR C AC CR C +G C
Sbjct: 470 CRGRGRCESGRCMCWPGYTGRDCGT----RACPGDCRGRGRCVDGRCVCNPGFTGEDCGS 525
Query: 1009 KGCGHVCAPVHQVDVGICVTECKVDQDCGEGRRCASNGCGRVCSPAQQ----REACEHQC 1176
+ C C + G+CV + G C++ C C Q R CE
Sbjct: 526 RRCPGDCRGHGLCEDGVCVCDAGYS-----GEDCSTRSCPGGCRGRGQCLDGRCVCE--- 577
Query: 1177 *EDKDCGSGHQCVRKGCGHVCSP--IPQVGICVT-ECNVDQDCGAGRRCTSNGCGR---- 1335
D SG C + C + CS + Q G+C+ E V +DC R C SN GR
Sbjct: 578 ----DGYSGEDCGVRQCPNDCSQHGVCQDGVCICWEGYVSEDCSI-RTCPSNCHGRGRCE 632
Query: 1336 ----VCSPPQGGGLCVNR-----CRGNWDCGAGEECIRKGCGRVCSPAQEPVVGICVDQC 1488
+C P G C R CRG C G G G +EP C
Sbjct: 633 EGRCLCDPGYTGPTCATRMCPADCRGRGRCVQGVCLCHVGYGGEDCGQEEPPASACPG-- 690
Query: 1489 QRHWECGPRMRCVSTGCGHICSPAQDQVEQRPGKCPVLPKGTIGLCAEFCSGDDSCPSGQ 1668
CGPR C + C +C VE G P I C C G C G
Sbjct: 691 ----GCGPRELCRAGQC--VC------VEGFRG-----PDCAIQTCPGDCRGRGECHDGS 733
Query: 1669 KCCSHG-CGHSCQTAVP 1716
C G G C VP
Sbjct: 734 CVCKDGYAGEDCGEEVP 750
Score = 64.3 bits (155), Expect = 4e-10
Identities = 87/348 (25%), Positives = 115/348 (33%), Gaps = 19/348 (5%)
Frame = +1
Query: 718 APVHQVGICVTECNVDQDCGEGRQC-----TSNGCGRVCSPVQQEDVGICVTECKVDQDC 882
+P G C +CN C GR T CG P + G CV V +
Sbjct: 179 SPPSASGSCPDDCNDQGRCVRGRCVCFPGYTGPSCGWPSCPGDCQGRGRCVQGVCVCRAG 238
Query: 883 GEGRRCTSNGCGRVCSPVQQKEACEHQCREDRDCGSGHQCVRKGCGHVCAPVHQVDVGIC 1062
G C+ C R CS Q+ CE G +CV C P + D
Sbjct: 239 FSGPDCSQRSCPRGCS---QRGRCE-----------GGRCV-------CDPGYTGD---- 273
Query: 1063 VTECKV---DQDCGEGRRCASNGCGRVCSPAQQREACE-HQC*EDKDCGSGHQCVRKGCG 1230
+C + + C + RC + C VC+P E C C + C +C C
Sbjct: 274 --DCGMRSCPRGCSQRGRCENGRC--VCNPGYTGEDCGVRSC--PRGCSQRGRCKDGRC- 326
Query: 1231 HVCSPIPQVGICVTECNVDQDCGAGRRCTSNGCGRVCSPPQGGGLCVNRCRGNWDCGAGE 1410
VC P C T + DCG G RC C VC W GE
Sbjct: 327 -VCDPGYTGEDCGTR-SCPWDCGEGGRCVDGRC--VC----------------WPGYTGE 366
Query: 1411 ECIRKGCGRVCSPAQEPVVGICV-------DQC---QRHWECGPRMRCVSTGCGHICSPA 1560
+C + C R C G C+ D C +C R RC C +C P
Sbjct: 367 DCSTRTCPRDCRGRGRCEDGECICDTGYSGDDCGVRSCPGDCNQRGRCEDGRC--VCWPG 424
Query: 1561 QDQVEQRPGKCPVLPKGTIGLCAEFCSGDDSCPSGQKCCSHGCGHSCQ 1704
+ CP +G G C ++ SG+ C C C+
Sbjct: 425 YTGTDCGSRACPRDCRGR-GRCENGVCVCNAGYSGEDCGVRSCPGDCR 471
>ref|NP_542181.1| WAP four-disulfide core domain protein 3 precursor [Homo sapiens].
Length = 231
Score = 97.4 bits (241), Expect = 4e-20
Identities = 49/176 (27%), Positives = 73/176 (41%), Gaps = 34/176 (19%)
Frame = +1
Query: 925 CSPVQQKEACEHQCREDRDCGSGHQCVRKGCGHVCAPVHQ---------VDVGICVTECK 1077
C P K C+ C+ D C + +C GCG +C + + + C+ C
Sbjct: 33 CPP--HKNPCKELCQGDELCPAEQKCCTTGCGRICRDIPKGRKRDCPRVIRKQSCLKRCI 90
Query: 1078 VDQDCGEGRRCASNGCGRVCSPAQQREA--------------CEHQC*EDKDCGSGHQCV 1215
D+ C ++C + GC + C ++ CE C D C GH+C
Sbjct: 91 TDETCPGVKKCCTLGCNKSCVVPISKQKLAEFGGECPADPLPCEELCDGDASCPQGHKCC 150
Query: 1216 RKGCGHVC-----------SPIPQVGICVTECNVDQDCGAGRRCTSNGCGRVCSPP 1350
GCG C P VG+C+ C +D++C AG +C +GCGR C PP
Sbjct: 151 STGCGRTCLGDIEGGRGGDCPKVLVGLCIVGCVMDENCQAGEKCCKSGCGRFCVPP 206
Score = 91.3 bits (225), Expect = 3e-18
Identities = 52/189 (27%), Positives = 77/189 (40%), Gaps = 21/189 (11%)
Frame = +1
Query: 121 CVTECKVDQDCGAGRRCTSNGCGRV-----------CSPIQQREACEHQCREDRDCGGGH 267
C C+ D+ C A ++C + GCGR+ C + ++++C +C D C G
Sbjct: 40 CKELCQGDELCPAEQKCCTTGCGRICRDIPKGRKRDCPRVIRKQSCLKRCITDETCPGVK 99
Query: 268 QCVRKGCGHVCA-PVHQVDVGICVMECRVDQDCGEGRLCISNGCGRVCFPVRRREACEHQ 444
+C GC C P+ + + EC D P+ CE
Sbjct: 100 KCCTLGCNKSCVVPISKQKLAEFGGECPAD-------------------PL----PCEEL 136
Query: 445 CREDRDCGSGHQCVRRGCGHVC---------APVHQVDVGICVTECRVDQDCGEGRLCIS 597
C D C GH+C GCG C +V VG+C+ C +D++C G C
Sbjct: 137 CDGDASCPQGHKCCSTGCGRTCLGDIEGGRGGDCPKVLVGLCIVGCVMDENCQAGEKCCK 196
Query: 598 NGCGRVCFP 624
+GCGR C P
Sbjct: 197 SGCGRFCVP 205
Score = 87.8 bits (216), Expect = 3e-17
Identities = 51/193 (26%), Positives = 77/193 (39%), Gaps = 23/193 (11%)
Frame = +1
Query: 424 REACEHQCREDRDCGSGHQCVRRGCGHVCAPVHQVDVGICVTECRVDQDCGEGRLCISNG 603
+ C+ C+ D C + +C GCG +C +D +GR
Sbjct: 37 KNPCKELCQGDELCPAEQKCCTTGCGRIC------------------RDIPKGR---KRD 75
Query: 604 CGRVCFPGRREGCEHQCREDRDCGSGHQCVRKGCGHVCA-PVHQVGI------------- 741
C RV R++ C +C D C +C GC C P+ + +
Sbjct: 76 CPRVI---RKQSCLKRCITDETCPGVKKCCTLGCNKSCVVPISKQKLAEFGGECPADPLP 132
Query: 742 CVTECNVDQDCGEGRQCTSNGCGRVC---------SPVQQEDVGICVTECKVDQDCGEGR 894
C C+ D C +G +C S GCGR C + VG+C+ C +D++C G
Sbjct: 133 CEELCDGDASCPQGHKCCSTGCGRTCLGDIEGGRGGDCPKVLVGLCIVGCVMDENCQAGE 192
Query: 895 RCTSNGCGRVCSP 933
+C +GCGR C P
Sbjct: 193 KCCKSGCGRFCVP 205
Score = 86.7 bits (213), Expect = 7e-17
Identities = 55/177 (31%), Positives = 75/177 (42%), Gaps = 26/177 (14%)
Frame = +1
Query: 1249 PQVGICVTECNVDQDCGAGRRCTSNGCGRVCSP-PQGGGL----------CVNRCRGNWD 1395
P C C D+ C A ++C + GCGR+C P+G C+ RC +
Sbjct: 35 PHKNPCKELCQGDELCPAEQKCCTTGCGRICRDIPKGRKRDCPRVIRKQSCLKRCITDET 94
Query: 1396 CGAGEECIRKGCGRVC---------------SPAQEPVVGICVDQCQRHWECGPRMRCVS 1530
C ++C GC + C PA +P+ C + C C +C S
Sbjct: 95 CPGVKKCCTLGCNKSCVVPISKQKLAEFGGECPA-DPLP--CEELCDGDASCPQGHKCCS 151
Query: 1531 TGCGHICSPAQDQVEQRPGKCPVLPKGTIGLCAEFCSGDDSCPSGQKCCSHGCGHSC 1701
TGCG C D R G CP K +GLC C D++C +G+KCC GCG C
Sbjct: 152 TGCGRTC--LGDIEGGRGGDCP---KVLVGLCIVGCVMDENCQAGEKCCKSGCGRFC 203
Score = 80.5 bits (197), Expect = 5e-15
Identities = 46/175 (26%), Positives = 68/175 (38%), Gaps = 34/175 (19%)
Frame = +1
Query: 1135 CSPAQQREACEHQC*EDKDCGSGHQCVRKGCGHVCSPIPQ-----------VGICVTECN 1281
C P + C+ C D+ C + +C GCG +C IP+ C+ C
Sbjct: 33 CPP--HKNPCKELCQGDELCPAEQKCCTTGCGRICRDIPKGRKRDCPRVIRKQSCLKRCI 90
Query: 1282 VDQDCGAGRRCTSNGCGRVCSPP-------QGGGLCV-------NRCRGNWDCGAGEECI 1419
D+ C ++C + GC + C P + GG C C G+ C G +C
Sbjct: 91 TDETCPGVKKCCTLGCNKSCVVPISKQKLAEFGGECPADPLPCEELCDGDASCPQGHKCC 150
Query: 1420 RKGCGRVC---------SPAQEPVVGICVDQCQRHWECGPRMRCVSTGCGHICSP 1557
GCGR C + +VG+C+ C C +C +GCG C P
Sbjct: 151 STGCGRTCLGDIEGGRGGDCPKVLVGLCIVGCVMDENCQAGEKCCKSGCGRFCVP 205
Score = 80.1 bits (196), Expect = 7e-15
Identities = 45/172 (26%), Positives = 69/172 (40%), Gaps = 34/172 (19%)
Frame = +1
Query: 622 PGRREGCEHQCREDRDCGSGHQCVRKGCGHVCAP-----------VHQVGICVTECNVDQ 768
P + C+ C+ D C + +C GCG +C V + C+ C D+
Sbjct: 34 PPHKNPCKELCQGDELCPAEQKCCTTGCGRICRDIPKGRKRDCPRVIRKQSCLKRCITDE 93
Query: 769 DCGEGRQCTSNGCGRVC-SPVQQEDV----GICVTE-------CKVDQDCGEGRRCTSNG 912
C ++C + GC + C P+ ++ + G C + C D C +G +C S G
Sbjct: 94 TCPGVKKCCTLGCNKSCVVPISKQKLAEFGGECPADPLPCEELCDGDASCPQGHKCCSTG 153
Query: 913 CGRVC-----------SPVQQKEACEHQCREDRDCGSGHQCVRKGCGHVCAP 1035
CGR C P C C D +C +G +C + GCG C P
Sbjct: 154 CGRTCLGDIEGGRGGDCPKVLVGLCIVGCVMDENCQAGEKCCKSGCGRFCVP 205
Score = 80.1 bits (196), Expect = 7e-15
Identities = 45/166 (27%), Positives = 66/166 (39%), Gaps = 34/166 (20%)
Frame = +1
Query: 850 CVTECKVDQDCGEGRRCTSNGCGRVCSPVQQ-----------KEACEHQCREDRDCGSGH 996
C C+ D+ C ++C + GCGR+C + + K++C +C D C
Sbjct: 40 CKELCQGDELCPAEQKCCTTGCGRICRDIPKGRKRDCPRVIRKQSCLKRCITDETCPGVK 99
Query: 997 QCVRKGCGHVC-APVHQ-----------VDVGICVTECKVDQDCGEGRRCASNGCGRVC- 1137
+C GC C P+ + D C C D C +G +C S GCGR C
Sbjct: 100 KCCTLGCNKSCVVPISKQKLAEFGGECPADPLPCEELCDGDASCPQGHKCCSTGCGRTCL 159
Query: 1138 ----------SPAQQREACEHQC*EDKDCGSGHQCVRKGCGHVCSP 1245
P C C D++C +G +C + GCG C P
Sbjct: 160 GDIEGGRGGDCPKVLVGLCIVGCVMDENCQAGEKCCKSGCGRFCVP 205
Score = 61.2 bits (147), Expect = 3e-09
Identities = 33/96 (34%), Positives = 48/96 (50%), Gaps = 1/96 (1%)
Frame = +1
Query: 1441 CSPAQEPVVGICVDQCQRHWECGPRMRCVSTGCGHICSPAQDQVEQRPGKCP-VLPKGTI 1617
C P + P C + CQ C +C +TGCG IC +D + R CP V+ K +
Sbjct: 33 CPPHKNP----CKELCQGDELCPAEQKCCTTGCGRIC---RDIPKGRKRDCPRVIRKQS- 84
Query: 1618 GLCAEFCSGDDSCPSGQKCCSHGCGHSCQTAVPDEK 1725
C + C D++CP +KCC+ GC SC + +K
Sbjct: 85 --CLKRCITDETCPGVKKCCTLGCNKSCVVPISKQK 118
>ref|NP_002151.2| tenascin precursor [Homo sapiens].
Length = 2201
Score = 86.3 bits (212), Expect = 1e-16
Identities = 128/493 (25%), Positives = 173/493 (35%), Gaps = 50/493 (10%)
Frame = +1
Query: 151 CGAGRRCTSNGCGRVCSPIQQREAC-EHQCREDRDCGGGHQCVRKGCGHVCAPVHQVDVG 327
C ++ GCG VC P + C E +C +C +C+ C +C D G
Sbjct: 161 CSGRGNFSTEGCGCVCEPGWKGPNCSEPEC--PGNCHLRGRCIDGQC--IC------DDG 210
Query: 328 ICVMEC---RVDQDCGEGRLCISNGCGRVCFPVR-----RREACEHQCRED--------- 456
+C DC + C++ C +CF RE C C E+
Sbjct: 211 FTGEDCSQLACPSDCNDQGKCVNGVC--ICFEGYAGADCSREICPVPCSEEHGTCVDGLC 268
Query: 457 --RDCGSGHQCVRRGCGHVCAPVHQVDVGICV-TECRVDQDCGEGRLCISNGCGRVCFP- 624
D +G C + C + C + G CV EC D+ G C C CF
Sbjct: 269 VCHDGFAGDDCNKPLCLNNC-----YNRGRCVENECVCDEGF-TGEDCSELICPNDCFDR 322
Query: 625 GRREGCEHQCREDRDCGSGHQCVRKGCGHVCAPVHQVGICVTECNVDQDCGEGRQCTSNG 804
GR C E +G C + C H C H G C V + G C+
Sbjct: 323 GRCINGTCYCEEG---FTGEDCGKPTCPHAC---HTQGRCEEGQCVCDEGFAGVDCSEKR 376
Query: 805 CGRVCSPVQQEDVGICVT-ECKVDQ-----DCGEGR---------RCTSNGCGRVCSPVQ 939
C P + G CV C+ D DCGE + RC + C VC
Sbjct: 377 C-----PADCHNRGRCVDGRCECDDGFTGADCGELKCPNGCSGHGRCVNGQC--VCDEGY 429
Query: 940 QKEACEHQCREDRDCGSGHQCVRKGCGHVCAPVHQVDVGICVTECKVDQDCGEGRRCASN 1119
E C Q R DC S +CV C VC Q G ++ DC + RC +
Sbjct: 430 TGEDCS-QLRCPNDCHSRGRCVEGKC--VC---EQGFKGYDCSDMSCPNDCHQHGRCVNG 483
Query: 1120 GCGRVCSPAQQREAC-EHQC*EDKDCGSGHQCVRKGCGHVCSPIPQVGICVTECNVDQDC 1296
C VC E C + QC +DC + CV C VC G E + DC
Sbjct: 484 MC--VCDDGYTGEDCRDRQC--PRDCSNRGLCVDGQC--VCED-GFTGPDCAELSCPNDC 536
Query: 1297 GAGRRCTSNGC-------GRVCSPPQGGGLCVNRCRGNWDCGAGEECIRKG-----CGRV 1440
RC + C G+ C + C + C G C G+ +G CG+
Sbjct: 537 HGQGRCVNGQCVCHEGFMGKDCKEQR----CPSDCHGQGRCVDGQCICHEGFTGLDCGQH 592
Query: 1441 CSPAQEPVVGICV 1479
P+ +G CV
Sbjct: 593 SCPSDCNNLGQCV 605
Score = 73.2 bits (178), Expect = 8e-13
Identities = 120/454 (26%), Positives = 149/454 (32%), Gaps = 65/454 (14%)
Frame = +1
Query: 109 DVGICVTECKVDQDCGAGRRCTSNGCGRVCSPIQQREACEHQCREDRDCGGGHQCVRKGC 288
D G CV + + AG C+ C CS ++ C D G C + C
Sbjct: 227 DQGKCVNGVCICFEGYAGADCSREICPVPCS--EEHGTCVDGLCVCHDGFAGDDCNKPLC 284
Query: 289 GHVCAPVHQVDVGICVM-ECRVDQ--------------DCGEGRLCISNGC-------GR 402
+ C + G CV EC D+ DC + CI+ C G
Sbjct: 285 LNNC-----YNRGRCVENECVCDEGFTGEDCSELICPNDCFDRGRCINGTCYCEEGFTGE 339
Query: 403 VCFPVRRREACEHQCREDRDCGSGHQCVRRG-----CGHVCAPVHQVDVGICVT-ECRVD 564
C + C H C C G G C P + G CV C D
Sbjct: 340 DC----GKPTCPHACHTQGRCEEGQCVCDEGFAGVDCSEKRCPADCHNRGRCVDGRCECD 395
Query: 565 Q-----DCGEGRLCISNGC---GR------VCFPGRR-EGCEHQCREDRDCGSGHQCVRK 699
DCGE L NGC GR VC G E C Q R DC S +CV
Sbjct: 396 DGFTGADCGE--LKCPNGCSGHGRCVNGQCVCDEGYTGEDCS-QLRCPNDCHSRGRCVEG 452
Query: 700 GC-------GHVCAPV------HQVGICVTECNVDQDCGEGRQCTSNGCGRVCSPVQQED 840
C G+ C+ + HQ G CV V D G C C R CS +
Sbjct: 453 KCVCEQGFKGYDCSDMSCPNDCHQHGRCVNGMCVCDDGYTGEDCRDRQCPRDCS-----N 507
Query: 841 VGICVTECKVDQDCGEGRRCTSNGCGRVCSPVQQKEACEHQCREDRDCGSGHQCVRKGCG 1020
G+CV V +D G C C DC +CV C
Sbjct: 508 RGLCVDGQCVCEDGFTGPDCAELSC-------------------PNDCHGQGRCVNGQC- 547
Query: 1021 HVCAPVHQVDVGICVTECKVDQDCGEGRRCASNGCGRVCSPAQQREAC-EHQC*EDKDCG 1197
VC H+ +G E + DC RC C +C C +H C DC
Sbjct: 548 -VC---HEGFMGKDCKEQRCPSDCHGQGRCVDGQC--ICHEGFTGLDCGQHSC--PSDCN 599
Query: 1198 SGHQCVRKGC-------GHVCSPI-PQVGICVTE 1275
+ QCV C G CS + P + VTE
Sbjct: 600 NLGQCVSGRCICNEGYSGEDCSEVSPPKDLVVTE 633
Score = 66.2 bits (160), Expect = 1e-10
Identities = 108/437 (24%), Positives = 142/437 (32%), Gaps = 67/437 (15%)
Frame = +1
Query: 595 SNGCGRVCFPGRREGCEHQCREDRDCGSGHQCVRKGCGHVCAPVHQVGICVTECNVDQDC 774
+ GCG VC PG + G C C C H G C+ + D
Sbjct: 169 TEGCGCVCEPGWK---------------GPNCSEPECPGNC---HLRGRCIDGQCICDDG 210
Query: 775 GEGRQCTSNGCGRVCSPVQQEDVGICVTECKVDQDCGEGRRCTSNGCGRVCSPVQQKEAC 954
G C+ C C+ D G CV + + G C+ C CS ++ C
Sbjct: 211 FTGEDCSQLACPSDCN-----DQGKCVNGVCICFEGYAGADCSREICPVPCS--EEHGTC 263
Query: 955 EHQCREDRDCGSGHQCVRKGCGHVCAPVHQVDVGICV-TECKVDQ--------------D 1089
D +G C + C + C + G CV EC D+ D
Sbjct: 264 VDGLCVCHDGFAGDDCNKPLCLNNC-----YNRGRCVENECVCDEGFTGEDCSELICPND 318
Query: 1090 CGEGRRCASNGC-------GRVCSPAQQREACEHQC*EDKDCGSGHQCV--RKGCGHVCS 1242
C + RC + C G C + C H C C G QCV G CS
Sbjct: 319 CFDRGRCINGTCYCEEGFTGEDCG----KPTCPHACHTQGRCEEG-QCVCDEGFAGVDCS 373
Query: 1243 PIPQVGICVTECN-----VDQDCGAGRRCTSNGCGRVCSPP--QGGGLCVNRCRGNWDCG 1401
C +C+ VD C T CG + P G G CVN G C
Sbjct: 374 E----KRCPADCHNRGRCVDGRCECDDGFTGADCGELKCPNGCSGHGRCVN---GQCVCD 426
Query: 1402 ---AGEECIRKGCGRVCSPAQEPVVGICVDQCQRHW------------ECGPRMRCVSTG 1536
GE+C + C C V G CV C++ + +C RCV+
Sbjct: 427 EGYTGEDCSQLRCPNDCHSRGRCVEGKCV--CEQGFKGYDCSDMSCPNDCHQHGRCVNGM 484
Query: 1537 CGHICSPAQDQVEQRPGKCP--------------VLPKGTIGL-CAEF-----CSGDDSC 1656
C +C + R +CP V G G CAE C G C
Sbjct: 485 C--VCDDGYTGEDCRDRQCPRDCSNRGLCVDGQCVCEDGFTGPDCAELSCPNDCHGQGRC 542
Query: 1657 PSGQKCCSHG-CGHSCQ 1704
+GQ C G G C+
Sbjct: 543 VNGQCVCHEGFMGKDCK 559
Score = 51.2 bits (121), Expect = 3e-06
Identities = 73/307 (23%), Positives = 100/307 (32%), Gaps = 33/307 (10%)
Frame = +1
Query: 880 CGEGRRCTSNGCGRVCSPVQQKEAC-EHQCREDRDCGSGHQCVRKGCGHVCAPVHQVDVG 1056
C ++ GCG VC P + C E +C +C +C+ C +C D G
Sbjct: 161 CSGRGNFSTEGCGCVCEPGWKGPNCSEPEC--PGNCHLRGRCIDGQC--IC------DDG 210
Query: 1057 ICVTECK---VDQDCGEGRRCASNGC-------GRVCSPAQQREACEHQC*EDKD-CGSG 1203
+C DC + +C + C G CS RE C C E+ C G
Sbjct: 211 FTGEDCSQLACPSDCNDQGKCVNGVCICFEGYAGADCS----REICPVPCSEEHGTCVDG 266
Query: 1204 HQCVRKG-CGHVCSPIPQVGICVTECN-----VDQDCGAGRRCTSNGCGRVCSPPQ--GG 1359
G G C+ +C+ C V+ +C T C + P
Sbjct: 267 LCVCHDGFAGDDCNK----PLCLNNCYNRGRCVENECVCDEGFTGEDCSELICPNDCFDR 322
Query: 1360 GLCVNRCRGNWDCGAGEECIRKGCGRVCSPAQEPVVGICVDQCQRHW------------E 1503
G C+N + GE+C + C C G CV C + +
Sbjct: 323 GRCINGTCYCEEGFTGEDCGKPTCPHACHTQGRCEEGQCV--CDEGFAGVDCSEKRCPAD 380
Query: 1504 CGPRMRCVSTGCGHICSPAQDQVEQRPGKCPVLPKGTIGLCAEFCSGDDSCPSGQKCCSH 1683
C R RCV C C + KCP CSG C +GQ C
Sbjct: 381 CHNRGRCVDGRCE--CDDGFTGADCGELKCP-----------NGCSGHGRCVNGQCVCDE 427
Query: 1684 G-CGHSC 1701
G G C
Sbjct: 428 GYTGEDC 434
>ref|NP_941960.1| keratin-associated protein 10-4 [Homo sapiens].
Length = 401
Score = 83.6 bits (205), Expect = 6e-16
Identities = 102/423 (24%), Positives = 126/423 (29%), Gaps = 35/423 (8%)
Frame = +1
Query: 157 AGRRCTSNGCGRVCSPIQQREACEHQCREDRDCGGGHQCVRKGCGHVCAPVHQVDVGICV 336
+ R C C CS Q + C C E C VC PV +V C
Sbjct: 11 SSRVCLPGSCDS-CSDSWQVDDCPESCCEPPCCAPSCCAPAPCLSLVCTPVSRVSSPCCP 69
Query: 337 MECRVDQDCGEGRLCISNGCGRVCFPVRRREACEHQCREDRDCGSGHQCVRRGCGHVCAP 516
+ C E C S GC C P +C Q C + C + C VC
Sbjct: 70 VTC-------EPSPCQS-GCTSSCTP-----SCCQQSSCQLACCASSPCQQACCVPVCCK 116
Query: 517 VHQVDVGICVTECRVDQDCGEGRLCISNGCGR----------VCFPGRREGCEHQCREDR 666
CV C D C + C S C +C G C +
Sbjct: 117 TVCCKPVCCVPVCCGDSSCCQQSSCQSACCTSSPCQQACCVPICCKPVCSGISSSCCQQS 176
Query: 667 DCGSGHQCVRKGCGH-VCAPVHQVGICVTECN---VDQDCGEGRQCTSNGCGRV------ 816
C S CV C VC P C++ C Q + CTS+ C +
Sbjct: 177 SCVS---CVSSPCCQAVCEPSPCQSGCISSCTPSCCQQSSCQPACCTSSSCQQACCVPVC 233
Query: 817 -----CSPVQQEDVGICVTECKVDQDCGEGRRCTSNGCGRVCS-PVQQKEACEHQCREDR 978
C PV ED C + C CTS+ C + C PV K C
Sbjct: 234 CKTVCCKPVCSEDSSSCCQQSSCQPAC-----CTSSPCQQACCVPVCCKPVCCKPVGSVP 288
Query: 979 DCGSGHQ--CVRKGCGHVCAPVHQVDVGICVTECKVDQDCGEGRRCASNGCGRVCSPAQ- 1149
C C + C C Q G CV C C C VCS A
Sbjct: 289 ICSGASSLCCQQSSCQPACCTSSQSQQGCCVPVC-----------CKPVSCVPVCSGASS 337
Query: 1150 ---QREACEHQC*EDKDCGSGHQCVRKGCGHVCSP---IPQVGICVTECNVDQDCGAGRR 1311
Q+ +C+ C C V C VC P +P C + C
Sbjct: 338 SCCQQSSCQPACCTTSCCRPS-SSVSLLCRPVCRPACCVPVPSCCAPTSSCQPSCCRPAS 396
Query: 1312 CTS 1320
C S
Sbjct: 397 CVS 399
Score = 74.3 bits (181), Expect = 4e-13
Identities = 111/459 (24%), Positives = 141/459 (30%), Gaps = 16/459 (3%)
Frame = +1
Query: 373 RLCISNGCGRVCFPVRRREACEHQCREDRDCGSGHQCVRRGC-GHVCAPVHQVDVGICVT 549
R+C+ C C + + C C E C C C VC PV +V C
Sbjct: 13 RVCLPGSCDS-CSDSWQVDDCPESCCEPPCCAPSC-CAPAPCLSLVCTPVSRVSSPCCPV 70
Query: 550 ECRVDQDCGEGRLCISNGCGRVCFPG--RREGCEHQCREDRDCGSGHQCVRKGCGHVCAP 723
C E C S GC C P ++ C+ C C CV C VC
Sbjct: 71 TC-------EPSPCQS-GCTSSCTPSCCQQSSCQLACCASSPCQQAC-CVPVCCKTVC-- 119
Query: 724 VHQVGICVTECNVDQDCGEGRQCTSNGCGRVC---SPVQQEDVGICVTECKVDQDCGEGR 894
C C V CG+ C + C C SP QQ CV C
Sbjct: 120 ------CKPVCCVPVCCGDSSCCQQSSCQSACCTSSPCQQ---ACCVPIC---------- 160
Query: 895 RCTSNGCGRVCSPVQQKEACEHQCREDRDCGSGHQCVRKGCGH-VC--APVHQVDVGICV 1065
C VCS + C + C S CV C VC +P + C
Sbjct: 161 ------CKPVCSGISSS------CCQQSSCVS---CVSSPCCQAVCEPSPCQSGCISSCT 205
Query: 1066 TECKVDQDCGEGRRCASNGCGRVCSPAQ--QREACEHQC*EDKDCGSGHQCVRKGCGHVC 1239
C C + C S+ C + C + C+ C ED S C + C C
Sbjct: 206 PSCCQQSSC-QPACCTSSSCQQACCVPVCCKTVCCKPVCSED----SSSCCQQSSCQPAC 260
Query: 1240 ---SPIPQVGICVTECNVDQDCGAGRRCTSNGCGRVCSPPQGGGLCVNRCRGNWDCGAGE 1410
SP Q CV C C VC P G V C G +
Sbjct: 261 CTSSPCQQA-CCVPVC----------------CKPVCCKPVGS---VPICSG----ASSL 296
Query: 1411 ECIRKGCGRVCSPAQEPVVGICVDQCQRHWECGPRMRCVSTGCGHICSPAQDQVEQRPGK 1590
C + C C + + G CV C + C P S+ C C + Q
Sbjct: 297 CCQQSSCQPACCTSSQSQQGCCVPVCCKPVSCVPVCSGASSSC---CQQSSCQPACCTTS 353
Query: 1591 CPVLPKGTIGLCAEFCSGDDSCPSGQKCC--SHGCGHSC 1701
C P ++ L C CC + C SC
Sbjct: 354 C-CRPSSSVSLLCRPVCRPACCVPVPSCCAPTSSCQPSC 391
>ref|NP_004516.2| low-density lipoprotein receptor-related protein 2 precursor [Homo
sapiens].
Length = 4655
Score = 81.6 bits (200), Expect = 2e-15
Identities = 122/502 (24%), Positives = 175/502 (34%), Gaps = 85/502 (16%)
Frame = +1
Query: 451 EDRDCGSGHQCVRRGCGHVCAPVHQVDVGICVTECRVDQD-----CGEGRLCI-SNG--C 606
+ + C + + GC H+CAP G EC+ + + CI NG C
Sbjct: 2647 QKQQCNNPCEQFNGGCSHICAP------GPNGAECQCPHEGNWYLANNRKHCIVDNGERC 2700
Query: 607 GR---VCFPGRREGCEHQCREDRDCGSGHQCVRKGCG-HVCAPVHQV---GICVT---EC 756
G C GR E +C D DCG G + C H C+P G CV C
Sbjct: 2701 GASSFTCSNGRCISEEWKCDNDNDCGDGSDEMESVCALHTCSPTAFTCANGRCVQYSYRC 2760
Query: 757 NVDQDCGEGRQ---CTSNGC---------GRVCSPVQQEDVGICVTECKVDQDCGEGRRC 900
+ DCG+G C C R C P +E + V C D + + + C
Sbjct: 2761 DYYNDCGDGSDEAGCLFRDCNATTEFMCNNRRCIP--REFICNGVDNCH-DNNTSDEKNC 2817
Query: 901 TSNGCGRVCSPVQQKEAC---EHQCREDRDCGSGHQCVRKGC-GHVCAPVH-QVDVGICV 1065
C + C + C D DCG C H C+ Q G C+
Sbjct: 2818 PDRTCQSGYTKCHNSNICIPRVYLCDGDNDCGDNSDENPTYCTTHTCSSSEFQCASGRCI 2877
Query: 1066 TE---CKVDQDCGEG-----------RRCASNGC---GRVCSPAQQREACEHQC*EDKDC 1194
+ C + DC + R C ++ G C P++ ++ C + D
Sbjct: 2878 PQHWYCDQETDCFDASDEPASCGHSERTCLADEFKCDGGRCIPSEWICDGDNDCGDMSDE 2937
Query: 1195 GSGHQCVRKGCG---HVC-SPIPQVGICVTE---CNVDQDCGAGRRCTSNGCGRVCSPPQ 1353
HQC + C +C + P C+ + C+ D DC G N R CS +
Sbjct: 2938 DKRHQCQNQNCSDSEFLCVNDRPPDRRCIPQSWVCDGDVDCTDGYDENQNCTRRTCSENE 2997
Query: 1354 ---GGGLCVN---RCRGNWDCGAGEE---CIRKGCGRVCSPAQEPVVGICVDQ---CQRH 1497
G GLC+ RC + DCG + C+ + C + Q G C+ + C
Sbjct: 2998 FTCGYGLCIPKIFRCDRHNDCGDYSDERGCLYQTCQQNQFTCQN---GRCISKTFVCDED 3054
Query: 1498 WECGPRMRCVSTGCGHICSPAQDQVEQRPGKCPVLPKGTIGLCAE---FCSGDDSC--PS 1662
+CG S H+C + KC G C E C+ D C S
Sbjct: 3055 NDCGDG----SDELMHLCHTPEPTCPPHEFKC------DNGRCIEMMKLCNHLDDCLDNS 3104
Query: 1663 GQKCCS---------HGCGHSC 1701
+K C GC H+C
Sbjct: 3105 DEKGCGINECHDPSISGCDHNC 3126
Score = 79.7 bits (195), Expect = 9e-15
Identities = 126/515 (24%), Positives = 176/515 (34%), Gaps = 89/515 (17%)
Frame = +1
Query: 211 QREACEHQCREDRDCGGGHQCVRKGCGHVCAPVHQVDVGICVME-----------CRVD- 354
Q++ C + C + GC H+CAP C E C VD
Sbjct: 2647 QKQQCNNPCEQ----------FNGGCSHICAPGPNGAECQCPHEGNWYLANNRKHCIVDN 2696
Query: 355 -QDCGEGRLCISNGCGRVCFPVRRREACEHQCREDRDCGSGHQCVRRGCG-HVCAP-VHQ 525
+ CG SNG R + E +C D DCG G + C H C+P
Sbjct: 2697 GERCGASSFTCSNG---------RCISEEWKCDNDNDCGDGSDEMESVCALHTCSPTAFT 2747
Query: 526 VDVGICVT---ECRVDQDCGEG---RLCISNGC---------GRVCFPGRREGCE--HQC 654
G CV C DCG+G C+ C R C P R C C
Sbjct: 2748 CANGRCVQYSYRCDYYNDCGDGSDEAGCLFRDCNATTEFMCNNRRCIP-REFICNGVDNC 2806
Query: 655 REDRDCGSGHQCVRKGCGHVCAPVHQVGICVTE---CNVDQDCGEGRQ-----CTSNGCG 810
D + C + C H IC+ C+ D DCG+ CT++ C
Sbjct: 2807 -HDNNTSDEKNCPDRTCQSGYTKCHNSNICIPRVYLCDGDNDCGDNSDENPTYCTTHTCS 2865
Query: 811 RVCSPVQQEDVGICVTE---CKVDQDCGEGRRCTSNGCG---RVCSPVQQK------EAC 954
S Q G C+ + C + DC + ++ CG R C + K
Sbjct: 2866 ---SSEFQCASGRCIPQHWYCDQETDCFDASDEPAS-CGHSERTCLADEFKCDGGRCIPS 2921
Query: 955 EHQCREDRDCG------SGHQCVRKGCG---HVCAPVHQVDVGICVTE---CKVDQDCGE 1098
E C D DCG HQC + C +C D C+ + C D DC +
Sbjct: 2922 EWICDGDNDCGDMSDEDKRHQCQNQNCSDSEFLCVNDRPPD-RRCIPQSWVCDGDVDCTD 2980
Query: 1099 GRRCASNGCGRVCSPAQQREACEH--------QC*EDKDCGSGHQCVRKGCGH-VCSP-- 1245
G N R CS + C + +C DCG +GC + C
Sbjct: 2981 GYDENQNCTRRTCS--ENEFTCGYGLCIPKIFRCDRHNDCGDYSD--ERGCLYQTCQQNQ 3036
Query: 1246 -IPQVGICVTE---CNVDQDCGAGRRCTSNGCGR---VCSPPQ---GGGLCVNRCRGNWD 1395
Q G C+++ C+ D DCG G + C C P + G C+ +
Sbjct: 3037 FTCQNGRCISKTFVCDEDNDCGDGSDELMHLCHTPEPTCPPHEFKCDNGRCIEMMK---L 3093
Query: 1396 CGAGEECI----RKGCGRVCSPAQEPVVGICVDQC 1488
C ++C+ KGCG + +P + C C
Sbjct: 3094 CNHLDDCLDNSDEKGCG--INECHDPSISGCDHNC 3126
Score = 58.9 bits (141), Expect = 2e-08
Identities = 91/374 (24%), Positives = 125/374 (33%), Gaps = 41/374 (10%)
Frame = +1
Query: 736 GICVTECNVDQDCGEGRQCTSNGCGRVCSPVQQEDVGICVTE-----------CKVD--Q 876
GI N Q C + + GC +C+P C E C VD +
Sbjct: 2639 GINTVVKNQKQQCNNPCEQFNGGCSHICAPGPNGAECQCPHEGNWYLANNRKHCIVDNGE 2698
Query: 877 DCGEGRRCTSNGCGRVCSPVQQKEACEHQCREDRDCGSGHQCVRKGCG-HVCAP-VHQVD 1050
CG SN GR S E +C D DCG G + C H C+P
Sbjct: 2699 RCGASSFTCSN--GRCISE-------EWKCDNDNDCGDGSDEMESVCALHTCSPTAFTCA 2749
Query: 1051 VGICVT---ECKVDQDCGEGRRCASNGCGRVCSPAQQREACEHQC*EDKDCGSGHQCVRK 1221
G CV C DCG+G A GC D + + C +
Sbjct: 2750 NGRCVQYSYRCDYYNDCGDGSDEA--GC----------------LFRDCNATTEFMCNNR 2791
Query: 1222 GCGHVCSPIPQVGIC--VTECNVDQDCGAGRRCTSNGCGRVCSPPQGGGLCVNR---CRG 1386
C IP+ IC V C+ D + + C C + +C+ R C G
Sbjct: 2792 RC------IPREFICNGVDNCH-DNNTSDEKNCPDRTCQSGYTKCHNSNICIPRVYLCDG 2844
Query: 1387 NWDCGAGEECIRKGC-GRVCSPAQ-EPVVGICVDQCQRHWECGPRMRCVS-----TGCGH 1545
+ DCG + C CS ++ + G C+ Q HW C C CGH
Sbjct: 2845 DNDCGDNSDENPTYCTTHTCSSSEFQCASGRCIPQ---HWYCDQETDCFDASDEPASCGH 2901
Query: 1546 I-CSPAQDQVEQRPGKCPVLPKGTIGLCAEFCSGDDSC------PSGQKCCSHGCGHSCQ 1704
+ D+ + G+C +P I C GD+ C +C + C S
Sbjct: 2902 SERTCLADEFKCDGGRC--IPSEWI------CDGDNDCGDMSDEDKRHQCQNQNCSDSEF 2953
Query: 1705 TAV----PDEKTFP 1734
V PD + P
Sbjct: 2954 LCVNDRPPDRRCIP 2967
Score = 56.6 bits (135), Expect = 8e-08
Identities = 125/562 (22%), Positives = 185/562 (32%), Gaps = 74/562 (13%)
Frame = +1
Query: 127 TECKVDQDCGAG----------RRCTSNG---CGRVCSPIQQREACEHQCREDRDCGGGH 267
T C Q+C G C SN + C P + + C ++ D H
Sbjct: 3570 TLCNAHQNCPDGSDEDRLLCENHHCDSNEWQCANKRCIPESWQCDTFNDCEDNSDEDSSH 3629
Query: 268 QCVRKGCGHVCAPVH-QVDVGICVME---CRVDQDCGEGRLCISNGCGRVCFPVRRREAC 435
R C P + G C+ + C VD DCG+ P+ +
Sbjct: 3630 CASR-----TCRPGQFRCANGRCIPQAWKCDVDNDCGD----------HSDEPIEECMSS 3674
Query: 436 EHQCRE--DRDCGSGHQCVRRGCGHVCAPVHQVDVGICVTECRVDQDCGEGRLCISNGCG 609
H C + C + ++C+ + VC V +CR + D GC
Sbjct: 3675 AHLCDNFTEFSCKTNYRCIPKWA--VCNGVD---------DCRDNSD--------EQGCE 3715
Query: 610 -RVCFPGRREGCEH--------QCREDRDCGSG---HQCVRKGC--------GHVCAPVH 729
R C P C++ QC DCG C + C C P
Sbjct: 3716 ERTCHPVGDFRCKNHHCIPLRWQCDGQNDCGDNSDEENCAPRECTESEFRCVNQQCIPSR 3775
Query: 730 QVGICVTEC---NVDQDCG------EGRQCTSNGCGRVCSPVQQEDVGICVTECKVDQDC 882
+ +C + ++DC E QCTS C V S ++ + C+ + + DC
Sbjct: 3776 WICDHYNDCGDNSDERDCEMRTCHPEYFQCTSGHC--VHSELKCDGSADCL-DASDEADC 3832
Query: 883 G----EGRRC--TSNGC-GRVCSPVQQKEACEHQCREDRDCGSG-----HQCVRKGCG-- 1020
+G C T C VC P K C D DCG G H C+ C
Sbjct: 3833 PTRFPDGAYCQATMFECKNHVCIPPYWK------CDGDDDCGDGSDEELHLCLDVPCNSP 3886
Query: 1021 -------HVCAPVHQVDVGICVTECKVDQDCGEGRRCASNGCGRVCSPAQQREACEHQC* 1179
+ C H+V G+ DCG+G C R+ C
Sbjct: 3887 NRFRCDNNRCIYSHEVCNGV--------DDCGDGTDETEEHC---------RKPTPKPCT 3929
Query: 1180 E-DKDCGSGHQCVRKGCGHVCSPIPQVGICVTECNVDQDCGAGRRCTSNGCGRVCSP-PQ 1353
E + CG+GH C+ +VC G E ++ G R C N C + C+ +
Sbjct: 3930 EYEYKCGNGH-CIPHD--NVCDDADDCGDWSDELGCNK--GKERTCAENICEQNCTQLNE 3984
Query: 1354 GGGLCVNRCRGNWDCGAGEECI---RKGCGRVCSPAQEPVVGICVDQCQRHWECGPRMRC 1524
GG +C C AG E R C + +++C++ C R
Sbjct: 3985 GGFIC--------SCTAGFETNVFDRTSC-------------LDINECEQFGTCPQHCRN 4023
Query: 1525 VSTGCGHICSPAQDQVEQRPGK 1590
+C+ + RPGK
Sbjct: 4024 TKGSYECVCADGFTSMSDRPGK 4045
Score = 53.9 bits (128), Expect = 5e-07
Identities = 144/608 (23%), Positives = 196/608 (32%), Gaps = 140/608 (23%)
Frame = +1
Query: 283 GCGHVCAPVHQVDVGICVMECRVDQDCGEGRLCISNGCGRVC----FPVRRREACEH--- 441
GC H+C + G C D +L S C +C F E C
Sbjct: 3475 GCSHLCL----IKPGGKGFTCECPDDFRTLQLSGSTYCMPMCSSTQFLCANNEKCIPIWW 3530
Query: 442 QCREDRDCGSGHQ----CVRRGCGHVCAPVHQVDVGICV---TECRVDQDCGEGR----- 585
+C +DC G C +R C Q G C T C Q+C +G
Sbjct: 3531 KCDGQKDCSDGSDELALCPQRFCR---LGQFQCSDGNCTSPQTLCNAHQNCPDGSDEDRL 3587
Query: 586 LCISNGC--------GRVCFPGRREGCE--HQCREDRDCGSGHQCVRKGCG---HVCAPV 726
LC ++ C + C P + C+ + C ++ D S H C + C CA
Sbjct: 3588 LCENHHCDSNEWQCANKRCIPESWQ-CDTFNDCEDNSDEDSSH-CASRTCRPGQFRCAN- 3644
Query: 727 HQVGICVTE---CNVDQDCGEG-----RQCTSNGCGRVCSPVQQEDVGI---CVTE---C 864
G C+ + C+VD DCG+ +C S+ +C + C+ + C
Sbjct: 3645 ---GRCIPQAWKCDVDNDCGDHSDEPIEECMSS--AHLCDNFTEFSCKTNYRCIPKWAVC 3699
Query: 865 KVDQDCGEGRRCTSNGC-GRVCSPVQQKEACEH-------QCREDRDCG----------- 987
DC + GC R C PV H QC DCG
Sbjct: 3700 NGVDDCRD--NSDEQGCEERTCHPVGDFRCKNHHCIPLRWQCDGQNDCGDNSDEENCAPR 3757
Query: 988 ----SGHQCVRKGC-----------------------GHVCAPVH-QVDVGICV-TECKV 1080
S +CV + C C P + Q G CV +E K
Sbjct: 3758 ECTESEFRCVNQQCIPSRWICDHYNDCGDNSDERDCEMRTCHPEYFQCTSGHCVHSELKC 3817
Query: 1081 D-----QDCGEGRRCASNGCGRVCSPAQQREACEH-------QC*EDKDCGSG-----HQ 1209
D D + C + A E H +C D DCG G H
Sbjct: 3818 DGSADCLDASDEADCPTRFPDGAYCQATMFECKNHVCIPPYWKCDGDDDCGDGSDEELHL 3877
Query: 1210 CVRKGCGHVCSPIPQVGICVTE---CNVDQDCGAGRRCTSNGCGRVCSPP-------QGG 1359
C+ C C+ CN DCG G T C + P G
Sbjct: 3878 CLDVPCNSPNRFRCDNNRCIYSHEVCNGVDDCGDGTDETEEHCRKPTPKPCTEYEYKCGN 3937
Query: 1360 GLCV---NRCRGNWDCG--AGEECIRKGCGRVCSPAQEPVVGICVDQCQRHWECGPRMRC 1524
G C+ N C DCG + E KG R C+ IC C + E G C
Sbjct: 3938 GHCIPHDNVCDDADDCGDWSDELGCNKGKERTCAE------NICEQNCTQLNEGGFICSC 3991
Query: 1525 VS---------TGCGHICSPAQDQVEQRPGKCPVLPKGTIG----LCAE-FCSGDDSCPS 1662
+ T C I ++ EQ G CP + T G +CA+ F S D
Sbjct: 3992 TAGFETNVFDRTSCLDI-----NECEQF-GTCPQHCRNTKGSYECVCADGFTSMSDR--P 4043
Query: 1663 GQKCCSHG 1686
G++C + G
Sbjct: 4044 GKRCAAEG 4051
>ref|NP_002323.2| prolow-density lipoprotein receptor-related protein 1 precursor [Homo
sapiens].
Length = 4544
Score = 81.6 bits (200), Expect = 2e-15
Identities = 115/476 (24%), Positives = 162/476 (34%), Gaps = 72/476 (15%)
Frame = +1
Query: 205 IQQREACEHQCREDRDCGGGHQCVRKGCGHVCAPVHQVDVGICVMECRVDQDCGEGRLCI 384
++Q + H C+ + + G GH CA +G +GR C+
Sbjct: 3284 LRQPDVPNHPCKVNNGGCSNLCLLSPGGGHKCACPTNFYLG------------SDGRTCV 3331
Query: 385 SNGCGRVCFPVRRREACEH--QCREDRDCGSGHQCVRRGCGHV-CAPVH-QVDVGICVTE 552
SN C F + + +C + DCG H C C P Q GIC
Sbjct: 3332 SN-CTASQFVCKNDKCIPFWWKCDTEDDCGD-HSDEPPDCPEFKCRPGQFQCSTGICTNP 3389
Query: 553 ---CRVDQDCGEGRLCISNGCGRVCFPGRREGCEH---------QCREDRDCGSGHQCVR 696
C D DC + +N VC P + + C + +C +CG G
Sbjct: 3390 AFICDGDNDCQDNS-DEANCDIHVCLPSQFK-CTNTNRCIPGIFRCNGQDNCGDGED--E 3445
Query: 697 KGCGHVCAPVHQVGICVTE--------CNVDQDCGEGRQ----CTSNGCGRVCSPVQQED 840
+ C V +Q +T+ C+ D DC +G CT CG + +D
Sbjct: 3446 RDCPEVTCAPNQFQCSITKRCIPRVWVCDRDNDCVDGSDEPANCTQMTCG--VDEFRCKD 3503
Query: 841 VGICVT---ECKVDQDCGEGRRCTSNGCG-RVCSPVQ---QKEAC---EHQCREDRDCGS 990
G C+ +C + DCG+G C R C P Q + C QC D DCG
Sbjct: 3504 SGRCIPARWKCDGEDDCGDGSDEPKEECDERTCEPYQFRCKNNRCVPGRWQCDYDNDCGD 3563
Query: 991 G---HQCVRKGCGHV---CAPVHQVDVGICVT---ECKVDQDCGEGRRCASNGCGRVCSP 1143
C + C CA G C+ +C D DC +G C C
Sbjct: 3564 NSDEESCTPRPCSESEFSCAN------GRCIAGRWKCDGDHDCADGSD--EKDCTPRCDM 3615
Query: 1144 AQQREACEH------QC*EDKDCGSGHQCVRKGCGHVCSPIPQVGICVT-------ECNV 1284
Q + H +C D DC G G G P+ + T +C+
Sbjct: 3616 DQFQCKSGHCIPLRWRCDADADCMDGSDEEACGTGVRTCPLDEFQCNNTLCKPLAWKCDG 3675
Query: 1285 DQDCGAGRRCTSNGCGRVCSPPQGGGLCVN---------RCRGNWDCGAG---EEC 1416
+ DCG C R PP C N +C G +CG G E+C
Sbjct: 3676 EDDCGDNSDENPEECARFVCPPNRPFRCKNDRVCLWIGRQCDGTDNCGDGTDEEDC 3731
Score = 76.6 bits (187), Expect = 8e-14
Identities = 115/455 (25%), Positives = 154/455 (33%), Gaps = 69/455 (15%)
Frame = +1
Query: 355 QDCGEGRLCISNG-CGRVCFPVRRREACEHQCREDRDCGSGHQCVRRGCGHVCAPVHQVD 531
Q G + ++NG C +C C C ED+ + +V P Q
Sbjct: 800 QQVGTNKCRVNNGGCSSLCLATPGSRQCA--CAEDQVLDADGVTCLANPSYVPPPQCQPG 857
Query: 532 VGICVT--------ECRVDQDCGEGRLCISNGCGRVCFPGRREGCEHQ--------CRED 663
C +C D DC + C + P R CE+ C D
Sbjct: 858 EFACANSRCIQERWKCDGDNDCLDNSDEAPALCHQHTCPSDRFKCENNRCIPNRWLCDGD 917
Query: 664 RDCGSGHQCVRKGCGHVCAPVHQV----GICVT---ECNVDQDCGEGRQCTSNGCGRVCS 822
DCG+ C P +Q G C+ C++D DCG+ +++ C
Sbjct: 918 NDCGNSEDESNATCSARTCPPNQFSCASGRCIPISWTCDLDDDCGDRSDESASCAYPTCF 977
Query: 823 PVQQE--DVGICVT---ECKVDQDCGEGRRCTSNGCGRVCSPVQQK---EAC--EH-QCR 969
P+ Q + G C+ C D DCG+ GC CS Q K C EH C
Sbjct: 978 PLTQFTCNNGRCININWRCDNDNDCGD--NSDEAGCSHSCSSTQFKCNSGRCIPEHWTCD 1035
Query: 970 EDRDCGSGHQCVRKGCGHVCAPVHQVDVGICVT---ECKVDQDCGEGRRCASNGCGRVCS 1140
D DCG C + G C T +C++D +C
Sbjct: 1036 GDNDCGDYSDETHANCTNQATR----PPGGCHTDEFQCRLD---------------GLCI 1076
Query: 1141 PAQQREACEHQC*EDKDC-GSGHQCVRKGCGHVCSPIPQVGI-----CVTE---CNVDQD 1293
P + R C D DC S + +G HVC P + G C+++ C+ D D
Sbjct: 1077 PLRWR------CDGDTDCMDSSDEKSCEGVTHVCDPSVKFGCKDSARCISKAWVCDGDND 1130
Query: 1294 C---GAGRRCTSNGC----------GRVCSPPQGGGLCVNRCRGNWDCGAG-------EE 1413
C C S C VC PP C GN DCG G ++
Sbjct: 1131 CEDNSDEENCESLACRPPSHPCANNTSVCLPPD------KLCDGNDDCGDGSDEGELCDQ 1184
Query: 1414 CI--RKGCGRVCSPAQEPVVGICVDQCQRHWECGP 1512
C GC CS A P GI V C E GP
Sbjct: 1185 CSLNNGGCSHNCSVA--PGEGI-VCSCPLGMELGP 1216
Score = 56.2 bits (134), Expect = 1e-07
Identities = 90/378 (23%), Positives = 121/378 (32%), Gaps = 71/378 (18%)
Frame = +1
Query: 109 DVGICVT---ECKVDQDCGAGRRCTSNGCG-RVCSPIQQREACEH--------QCREDRD 252
D G C+ +C + DCG G C R C P Q R C++ QC D D
Sbjct: 3503 DSGRCIPARWKCDGEDDCGDGSDEPKEECDERTCEPYQFR--CKNNRCVPGRWQCDYDND 3560
Query: 253 CGGG---HQCVRKGCGHV---CAPVHQVDVGICVM---ECRVDQDCGEGR---------- 375
CG C + C CA G C+ +C D DC +G
Sbjct: 3561 CGDNSDEESCTPRPCSESEFSCAN------GRCIAGRWKCDGDHDCADGSDEKDCTPRCD 3614
Query: 376 ----LCISNGCGRVCFPVRRREACEHQCREDRDCGSGHQCVRRGCGHVCAPVHQVDVG-- 537
C S C P+R R C D DC G G G P+ +
Sbjct: 3615 MDQFQCKSGHC----IPLRWR------CDADADCMDGSDEEACGTGVRTCPLDEFQCNNT 3664
Query: 538 IC---VTECRVDQDCGEGRLCISNGCGR-VCFPGRREGCEH---------QCREDRDCGS 678
+C +C + DCG+ C R VC P R C++ QC +CG
Sbjct: 3665 LCKPLAWKCDGEDDCGDNSDENPEECARFVCPPNRPFRCKNDRVCLWIGRQCDGTDNCGD 3724
Query: 679 G---HQCVRKGCGHVCAPVHQVGICVTE--------CNVDQDCGEGRQCTSNGCGRVCSP 825
G C + +C + CN+ DCG+G
Sbjct: 3725 GTDEEDCEPPTAHTTHCKDKKEFLCRNQRCLSSSLRCNMFDDCGDGS------------- 3771
Query: 826 VQQEDVGI------CVTECKVDQDCGEGRRCTSNGCGRVCSPVQQKEACE---HQCREDR 978
+ED I C T + CG+ RC C AC H
Sbjct: 3772 -DEEDCSIDPKLTSCATNASI---CGDEARCVRTEKAAYC-------ACRSGFHTVPGQP 3820
Query: 979 DCGSGHQCVRKG-CGHVC 1029
C ++C+R G C +C
Sbjct: 3821 GCQDINECLRFGTCSQLC 3838
Score = 52.8 bits (125), Expect = 1e-06
Identities = 86/345 (24%), Positives = 124/345 (35%), Gaps = 47/345 (13%)
Frame = +1
Query: 796 SNGCGRVC--SPVQQEDVGICVTECKVDQDCGEGRRCTSNGCGRVCSPVQ---QKEACEH 960
+ GC +C SP C T + D GR C SN C+ Q + + C
Sbjct: 3298 NGGCSNLCLLSPGGGHKCA-CPTNFYLGSD---GRTCVSN-----CTASQFVCKNDKCIP 3348
Query: 961 ---QCREDRDCGSGHQCVRKGCGHV-CAPVH-QVDVGICVTE---CKVDQDCGEGRRCAS 1116
+C + DCG H C C P Q GIC C D DC + A+
Sbjct: 3349 FWWKCDTEDDCGD-HSDEPPDCPEFKCRPGQFQCSTGICTNPAFICDGDNDCQDNSDEAN 3407
Query: 1117 NGCGRVCSPAQQREACEHQC*E-------DKDCGSGHQCVRKGCGHV-CSP--------- 1245
VC P+Q + ++C +CG G + C V C+P
Sbjct: 3408 CDI-HVCLPSQFKCTNTNRCIPGIFRCNGQDNCGDGED--ERDCPEVTCAPNQFQCSITK 3464
Query: 1246 --IPQVGICVTECNVDQDCGAGR----RCTSNGCGRVCSPPQGGGLCVN---RCRGNWDC 1398
IP+V +C + D DC G CT CG + G C+ +C G DC
Sbjct: 3465 RCIPRVWVC----DRDNDCVDGSDEPANCTQMTCGVDEFRCKDSGRCIPARWKCDGEDDC 3520
Query: 1399 GAGEECIRKGCG-RVCSPAQEPVVGICVDQC-QRHWECGPRMRCVSTGCGHICSP---AQ 1563
G G + ++ C R C P Q ++C W+C C C+P ++
Sbjct: 3521 GDGSDEPKEECDERTCEPYQFRCKN---NRCVPGRWQCDYDNDCGDNSDEESCTPRPCSE 3577
Query: 1564 DQVEQRPGKCPVLPKGTIGLCAEF-CSGDDSCPSG--QKCCSHGC 1689
+ G+C + + C GD C G +K C+ C
Sbjct: 3578 SEFSCANGRC---------IAGRWKCDGDHDCADGSDEKDCTPRC 3613
>ref|NP_115821.2| multiple epidermal growth factor-like domains protein 11 precursor
[Homo sapiens].
Length = 1044
Score = 80.5 bits (197), Expect = 5e-15
Identities = 131/550 (23%), Positives = 171/550 (31%), Gaps = 70/550 (12%)
Frame = +1
Query: 298 CAPVHQVDVGICVMECRVDQDCGEGRLCISNGCGRVCFPVRRREACEHQCREDR---DCG 468
C P + C+ C ++C GR + C C P C C D C
Sbjct: 88 CCPGYYESGDFCIPLCT--EECVHGRCVSPDTCH--CEPGWGGPDCSSGCDSDHWGPHCS 143
Query: 469 SGHQCVRRGCGHVCAPVHQVDVGICVTECRVDQDCGEGRLCISNGCGRVCFPGRR-EGCE 645
+ QC G +C P+ G CV C G C +C PG +GC+
Sbjct: 144 NRCQCQN---GALCNPI----TGACV--------CAAGFR--GWRCEELCAPGTHGKGCQ 186
Query: 646 HQCREDRDCGSGHQCVRKGCGHVCAPVHQVGICV---------TECNVDQDCGEGRQC-- 792
C+ C G C + +CAP + C C + C G C
Sbjct: 187 LPCQ----CRHGASCDPRAGECLCAPGYTGVYCEELCPPGSHGAHCELRCPCQNGGTCHH 242
Query: 793 -----------TSNGCGRVCSPVQQEDVGICVTECKVDQDCGEGRRCTSNGCGRVCSPVQ 939
T C + C P G C D C G +C C+
Sbjct: 243 ITGECACPPGWTGAVCAQPCPP------GTFGQNCSQDCPCHHGGQCDHVTGQCHCTAGY 296
Query: 940 QKEACEH---------QCREDRDCGSGHQCVRKGCGHVCAPVHQVDVGICVTECKVDQDC 1092
+ C+ QC + DC +G QC G C EC+
Sbjct: 297 MGDRCQEECPFGSFGFQCSQHCDCHNGGQC-------------SPTTGAC--ECEPGY-- 339
Query: 1093 GEGRRCASNGCGRVCSPAQQREACEHQC*EDKDCGSGHQCVRKGC-------GHVCSPIP 1251
+G RC R+C C C D D V C GH C+
Sbjct: 340 -KGPRCQE----RLCPEGLHGPGCTLPCPCDADNTISCHPVTGACTCQPGWSGHHCNESC 394
Query: 1252 QVGICVTECNVDQDCGAGRRCTSNGCGRVCSPPQGGGLCVNRC-RGNWDCGAGEECIRKG 1428
VG C + C G C S G C+P G +C C G + C
Sbjct: 395 PVGYYGDGCQLPCTCQNGADCHSITGGCTCAPGFMGEVCAVSCAAGTYGPNCSSICSCNN 454
Query: 1429 CGRVCSPAQEPVVGICVDQCQRHWE----------------CGPRMRCVSTGCGHICSPA 1560
G CS PV G C C+ W+ C C + G CSP
Sbjct: 455 -GGTCS----PVDGSCT--CKEGWQGLDCTLPCPSGTWGLNCNESCTCAN---GAACSPI 504
Query: 1561 QDQVEQRPG----KCPV-LPKGTIGL-CAEF--CSGDDSCP--SGQKCCSHG-CGHSCQT 1707
PG C + P GT GL C+E CS D C +G CC G G C +
Sbjct: 505 DGSCSCTPGWLGDTCELPCPDGTFGLNCSEHCDCSHADGCDPVTGHCCCLAGWTGIRCDS 564
Query: 1708 AVPDEKTFPS 1737
P + P+
Sbjct: 565 TCPPGRWGPN 574
Score = 71.6 bits (174), Expect = 2e-12
Identities = 133/573 (23%), Positives = 167/573 (29%), Gaps = 61/573 (10%)
Frame = +1
Query: 151 CGAGRRCTSNGCGRVCSPIQQREACEHQCREDRDCGGGHQCVRKGCGHVCAPVHQ----- 315
C AG R C +C+P + C+ C+ C G C + +CAP +
Sbjct: 163 CAAGFRGWR--CEELCAPGTHGKGCQLPCQ----CRHGASCDPRAGECLCAPGYTGVYCE 216
Query: 316 --VDVGICVMECRVDQDCGEGRLC--ISNGC-------GRVCFPVRRREACEHQCREDRD 462
G C + C G C I+ C G VC C +D
Sbjct: 217 ELCPPGSHGAHCELRCPCQNGGTCHHITGECACPPGWTGAVCAQPCPPGTFGQNCSQDCP 276
Query: 463 CGSGHQCVRRGCGHVCAPVH------------QVDVGICVTECRVDQDCGEGRLCISNGC 606
C G QC HV H + G +C DC G C
Sbjct: 277 CHHGGQC-----DHVTGQCHCTAGYMGDRCQEECPFGSFGFQCSQHCDCHNGGQCSPTTG 331
Query: 607 GRVCFPGRR---------------EGCEHQCREDRDCGSGHQCVRKGC-------GHVCA 720
C PG + GC C D D V C GH C
Sbjct: 332 ACECEPGYKGPRCQERLCPEGLHGPGCTLPCPCDADNTISCHPVTGACTCQPGWSGHHCN 391
Query: 721 PVHQVGICVTECNVDQDCGEGRQCTSNGCGRVCSPVQQEDVGICVTECKVDQ---DCGEG 891
VG C + C G C S G C+P +V C C +C
Sbjct: 392 ESCPVGYYGDGCQLPCTCQNGADCHSITGGCTCAPGFMGEV--CAVSCAAGTYGPNCSSI 449
Query: 892 RRCTSNGCGRVCSPVQQKEACEHQCREDRDCGSGHQCVRKGCGHVCAPVHQVDVGICVTE 1071
C + G CSPV C+ G Q + C C G
Sbjct: 450 CSCNNGG---TCSPVDGSCTCKE----------GWQGL--DCTLPCPS------GTWGLN 488
Query: 1072 CKVDQDCGEGRRCASNGCGRVCSPAQQREACEHQC*EDKDCGSGHQCVRK-GCGHVCSPI 1248
C C G C+ C+P + CE C D G C C H
Sbjct: 489 CNESCTCANGAACSPIDGSCSCTPGWLGDTCELPC---PDGTFGLNCSEHCDCSHADGCD 545
Query: 1249 PQVGICVTECNVDQDCGAGRRCTSNGCGRVCSPPQGGGLCVNRCRGNWDCGAGEECIRKG 1428
P G C C AG T C C P + G C C C G C +
Sbjct: 546 PVTGHCC--------CLAG--WTGIRCDSTCPPGRWGPNCSVSC----SCENGGSCSPED 591
Query: 1429 CGRVCSPA-QEPVVG-ICVDQCQRHWECGPRMRCV--STGCGHICSPAQDQVEQRPGKCP 1596
C+P + P+ IC H P CV S C HI G C
Sbjct: 592 GSCECAPGFRGPLCQRICPPGFYGHGCAQPCPLCVHSSRPCHHIS-----------GICE 640
Query: 1597 VLPKGTIGLCAEFCSG---DDSCPSGQKCCSHG 1686
LP + LC + C+G C C ++G
Sbjct: 641 CLPGFSGALCNQVCAGGYFGQDCAQLCSCANNG 673
Score = 69.3 bits (168), Expect = 1e-11
Identities = 116/496 (23%), Positives = 147/496 (29%), Gaps = 58/496 (11%)
Frame = +1
Query: 130 ECKVDQDCGAGRRCTSNGCGRVCSPIQQREACEHQ--------------CREDRD----- 252
+C DC G +C+ C P + C+ + C D D
Sbjct: 313 QCSQHCDCHNGGQCSPTTGACECEPGYKGPRCQERLCPEGLHGPGCTLPCPCDADNTISC 372
Query: 253 --CGGGHQCVRKGCGHVCAPVHQVDVGICVMECRVDQDCGEGRLCISNGCGRVCFPVRRR 426
G C GH C VG C++ C G C S G C P
Sbjct: 373 HPVTGACTCQPGWSGHHCN--ESCPVGYYGDGCQLPCTCQNGADCHSITGGCTCAPGFMG 430
Query: 427 EACEHQCREDR---DCGSGHQCVRRGCGHVCAPVHQVDVGICVTECRVDQDCGEGRLCIS 597
E C C +C S C G C+PV G C C EG +
Sbjct: 431 EVCAVSCAAGTYGPNCSSICSCNNGG---TCSPVD----GSCT--------CKEGWQGLD 475
Query: 598 NGCGRVCFPGRREGCEHQCREDRDCGSGHQCVRKGCGHVCAPVHQVGICVTEC---NVDQ 768
C C P G C E C +G C C P C C
Sbjct: 476 --CTLPC-PSGTWGLN--CNESCTCANGAACSPIDGSCSCTPGWLGDTCELPCPDGTFGL 530
Query: 769 DCGEGRQCT-SNGC----GRVCSPVQQEDVGICVT--------ECKVDQDCGEGRRCTSN 909
+C E C+ ++GC G C + T C V C G C+
Sbjct: 531 NCSEHCDCSHADGCDPVTGHCCCLAGWTGIRCDSTCPPGRWGPNCSVSCSCENGGSCSPE 590
Query: 910 GCGRVCSPVQQKEACEHQCREDRDCGSGHQCVRKG--CGHVCAPVHQVDVGICVTECK-- 1077
C+P + C+ C GH C + C H P H + GIC EC
Sbjct: 591 DGSCECAPGFRGPLCQRICPPGF---YGHGCAQPCPLCVHSSRPCHHIS-GIC--ECLPG 644
Query: 1078 --------------VDQDCGEGRRCASNGCGRVCSPAQQREACEHQC*EDKDCGSGHQCV 1215
QDC + CA+NG CSP D C +
Sbjct: 645 FSGALCNQVCAGGYFGQDCAQLCSCANNG---TCSPI------------DGSCQCFPGWI 689
Query: 1216 RKGCGHVCSPIPQVGICVTECNVDQDCGAGRRCTSNGCGRVCSPPQGGGLCVNRCRGNWD 1395
K C C P C C+ C G C++ C+P G C RC +
Sbjct: 690 GKDCSQACPPGFWGPACFHACS----CHNGASCSAEDGACHCTPGWTGLFCTQRCPAAF- 744
Query: 1396 CGAGEECIRKGCGRVC 1443
K CGRVC
Sbjct: 745 -------FGKDCGRVC 753
Score = 67.0 bits (162), Expect = 6e-11
Identities = 119/513 (23%), Positives = 148/513 (28%), Gaps = 51/513 (9%)
Frame = +1
Query: 100 QAVDVGICVTECKVDQDCGAGRRCTSNGCGRVCSPIQQREACEHQCREDR---DCGGGHQ 270
++ VG C++ C G C S G C+P E C C +C
Sbjct: 392 ESCPVGYYGDGCQLPCTCQNGADCHSITGGCTCAPGFMGEVCAVSCAAGTYGPNCSSICS 451
Query: 271 CVRKGCGHVCAPVH----------------QVDVGICVMECRVDQDCGEGRLC--ISNGC 396
C G C+PV G + C C G C I C
Sbjct: 452 C---NNGGTCSPVDGSCTCKEGWQGLDCTLPCPSGTWGLNCNESCTCANGAACSPIDGSC 508
Query: 397 GRVCFPVRRREACE---------HQCREDRDCG--------SGHQCVRRG-----CGHVC 510
C P + CE C E DC +GH C G C C
Sbjct: 509 S--CTPGWLGDTCELPCPDGTFGLNCSEHCDCSHADGCDPVTGHCCCLAGWTGIRCDSTC 566
Query: 511 APVHQVDVGICVTECRVDQDCGEGRLCISNGCGRVCFPG-RREGCEHQCREDRDCGSGHQ 687
P G C V C G C C PG R C+ C GH
Sbjct: 567 PP------GRWGPNCSVSCSCENGGSCSPEDGSCECAPGFRGPLCQRICPPG---FYGHG 617
Query: 688 CVRKG--CGHVCAPVHQV-GICVTECNVDQDCGEGRQCTSNGCGRVCSPVQQEDVGICVT 858
C + C H P H + GIC +C G +C+ V
Sbjct: 618 CAQPCPLCVHSSRPCHHISGIC--------------ECLPGFSGALCNQV--------CA 655
Query: 859 ECKVDQDCGEGRRCTSNGCGRVCSPVQQKEACEHQCREDRDCGSGHQCVRKGCGHVCAPV 1038
QDC + C +NG CSP+ D C + K C C P
Sbjct: 656 GGYFGQDCAQLCSCANNG---TCSPI------------DGSCQCFPGWIGKDCSQACPP- 699
Query: 1039 HQVDVGICVTECKVDQDCGEGRRCASNGCGRVCSPAQQREACEHQC*E---DKDCGSGHQ 1209
G C C G C++ C+P C +C KDCG Q
Sbjct: 700 -----GFWGPACFHACSCHNGASCSAEDGACHCTPGWTGLFCTQRCPAAFFGKDCGRVCQ 754
Query: 1210 CVR-KGCGHVCSPIPQVGICVTECNVDQDCGAGRRCTSNGCGRVCSPPQGGGLCVNRCRG 1386
C C H+ G C C G T C + C+P G C C
Sbjct: 755 CQNGASCDHIS------GKCT--------CRTG--FTGQHCEQRCAPGTFGYGCQQLC-- 796
Query: 1387 NWDCGAGEECIRKGCGRVCSPAQEPVVGICVDQ 1485
+C C CSP + GI DQ
Sbjct: 797 --ECMNNSTCDHVTGTCYCSPGFK---GIRCDQ 824
>ref|NP_941961.2| keratin-associated protein 10-6 [Homo sapiens].
Length = 365
Score = 76.6 bits (187), Expect = 8e-14
Identities = 103/427 (24%), Positives = 130/427 (30%), Gaps = 15/427 (3%)
Frame = +1
Query: 133 CKVDQDCGAGRRCTSNGCGRVCSPIQQREACEHQCREDRDCGGGHQCVRKGCGHVCAPVH 312
C D G+ R C C CS Q + C C E C C+ VC PV
Sbjct: 9 CSSDLSYGS-RVCLPGSCDS-CSDSWQVDDCPESCCEPPCCAPA-PCLSL----VCTPVS 61
Query: 313 QVDVGICVMECRVDQDCGEGRLCISNGCGRVCFPVRRREACEHQCREDRDCGSGHQCVRR 492
+V C + C E C S GC C P +C Q C + C +
Sbjct: 62 RVSSPCCPVTC-------EPSPCQS-GCTSSCTP-----SCCQQSSCQLACCASSPCQQA 108
Query: 493 GCGHVCAPVHQVDVGICVTECRVDQDCGEGRLCISNGCGRVCFPGRREGCEHQCREDRDC 672
C VC CV+ C D C C + C C C+ C
Sbjct: 109 CCVPVCCKTVCCKPVCCVSVCCGDSSC-----CQQSSCQSACCTS--SPCQQAC------ 155
Query: 673 GSGHQCVRKGCGHVCAPVHQVGICVTECNVDQDCGEGRQCTSNGCGR-VC--SPVQQEDV 843
CV C VC+ + + C C C S+ C + VC SP Q
Sbjct: 156 -----CVPVCCKPVCSGIS------SSCCQQSSC---VSCVSSPCCQAVCEPSPCQSGCT 201
Query: 844 GICVTECKVDQDCGEGRRCTSNGCGRVCSPVQQKEACEHQCREDRDCGSGHQCVRKGCGH 1023
C C C + CTS+ C + C CV C
Sbjct: 202 SSCTPSCCQQSSC-QPTCCTSSPCQQAC------------------------CVPVCCVP 236
Query: 1024 V-CAPVHQVDVGICVTECKVDQDCGEGRRCASNGCGRVCSPAQ----QREACEHQC*EDK 1188
V C P D C + C C C VCS A Q+ +C+ C
Sbjct: 237 VCCVPTCSEDSSSCCQQSSCQPACCTSSPCQHACCVPVCSGASTSCCQQSSCQPACCTAS 296
Query: 1189 DCGSG-------HQCVRKGCGHVCSPIPQVGICVTECNVDQDCGAGRRCTSNGCGRVCSP 1347
C H + C C P+P G + C C C S C +CS
Sbjct: 297 CCRPSSSVSLLCHPVCKSTC---CVPVPSCGASASSC--QPSCCRTASCVSLLCRPMCSR 351
Query: 1348 PQGGGLC 1368
P LC
Sbjct: 352 PACYSLC 358
Score = 66.2 bits (160), Expect = 1e-10
Identities = 95/373 (25%), Positives = 118/373 (31%), Gaps = 20/373 (5%)
Frame = +1
Query: 652 CREDRDCGSGHQCVRKGCGHVCAPVHQVGICVTECNVDQDCGEGRQCTSNGCGRVCSPVQ 831
C D GS C+ C C+ QV C C + C C S VC+PV
Sbjct: 9 CSSDLSYGS-RVCLPGSCDS-CSDSWQVDDCPESC-CEPPCCAPAPCLS----LVCTPVS 61
Query: 832 QEDVGICVTECKVDQDCGEGRRCTSNGCGRVCSP-VQQKEACEHQCREDRDCGSGHQCVR 1008
+ C C E C S GC C+P Q+ +C+ C C CV
Sbjct: 62 RVSSPCCPVTC-------EPSPCQS-GCTSSCTPSCCQQSSCQLACCASSPCQQAC-CVP 112
Query: 1009 KGCGHVCA-PVHQVDVGICVTECKVDQDCGEGRRCASNGCGRVCSPAQQREACEHQC*ED 1185
C VC PV CV+ C D C + C S C SP QQ C C +
Sbjct: 113 VCCKTVCCKPV------CCVSVCCGDSSCCQQSSCQSACC--TSSPCQQ-ACCVPVCCKP 163
Query: 1186 KDCGSGHQCVRKG----------CGHVCSPIPQVGICVTECN---VDQDCGAGRRCTSNG 1326
G C ++ C VC P P C + C Q CTS+
Sbjct: 164 VCSGISSSCCQQSSCVSCVSSPCCQAVCEPSPCQSGCTSSCTPSCCQQSSCQPTCCTSSP 223
Query: 1327 CGRVCSPPQGGGLCVNRCRGNWDCGAGEECIRKGCGRVCSPAQEPVVGICVDQCQRHWEC 1506
C + C P CV C C ++ C PA C +H C
Sbjct: 224 CQQACCVPV---CCVPVCCVPTCSEDSSSCCQQSS---CQPA------CCTSSPCQHACC 271
Query: 1507 GPRMRCVSTGCGHICSPAQDQVEQRPGKCPVLPKGTIGLCAEFCSGD-----DSCPSGQK 1671
P ST C C + Q C LC C SC +
Sbjct: 272 VPVCSGASTSC---CQQSSCQPACCTASCCRPSSSVSLLCHPVCKSTCCVPVPSCGASAS 328
Query: 1672 CCSHGCGHSCQTA 1710
C C C+TA
Sbjct: 329 SCQPSC---CRTA 338
>ref|NP_941962.1| keratin-associated protein 10-7 [Homo sapiens].
Length = 370
Score = 76.3 bits (186), Expect = 1e-13
Identities = 108/417 (25%), Positives = 131/417 (31%), Gaps = 11/417 (2%)
Frame = +1
Query: 133 CKVDQDCGAGRRCTSNGCGRVCSPIQQREACEHQCREDRDCGGGHQCVRKGCGHVCAPVH 312
C D G+ R C C CS Q + C C E C C+ VC PV
Sbjct: 9 CSSDLSYGS-RVCLPGSCDS-CSDSWQVDDCPESCCEPPCCAPA-PCLSL----VCTPVS 61
Query: 313 QVDVGICVMECRVDQDCGEGRLCISNGCGRVCFPVRRREACEHQCREDRDCGSGHQCVRR 492
V C + C E C S GC C P +C Q C + C +
Sbjct: 62 YVSSPCCRVTC-------EPSPCQS-GCTSSCTP-----SCCQQSSCQLACCASSPCQQA 108
Query: 493 GCGHVCAPVHQVDVGICVTECRVDQDCGEGRLCISNGCGRVCFPGRREGCEHQCREDRDC 672
C VC CV C D C C + C C C+ C
Sbjct: 109 CCVPVCCKTVCCKPVYCVPVCSGDSSC-----CQQSSCQSACCTS--SPCQQAC------ 155
Query: 673 GSGHQCVRKGCGHVCAPVHQVGICVTECNVDQDCGEGRQCTSNGCGR-VC--SPVQQEDV 843
CV C VC+ + + C C C S+ C + VC SP Q +
Sbjct: 156 -----CVPICCKPVCSGIS------SSCCQQSSC---VSCVSSPCCQAVCEPSPCQSGCI 201
Query: 844 GICVTECKVDQDCGEGRRCTSNGCGRVCS-PVQQKEACEHQCREDRDCGSGHQCVRKGCG 1020
C C C + CTS+ C + C PV K C D D GS C C
Sbjct: 202 SSCTPSCCQQSSC-KPACCTSSPCQQACCVPVCCKPVCCVPTCSD-DSGS---C----CQ 252
Query: 1021 HVCAPVHQVDVGICVTECKVDQDCGEGRRCASNGCGRVCSPAQ----QREACEHQC*EDK 1188
C Q G CV C C C VCS A Q+ +C+ C
Sbjct: 253 PACCTSSQSQQGCCVPVC-----------CKPVCCVPVCSGASTSCCQQSSCQPACCTTS 301
Query: 1189 DCGSGHQCVRKGCGHVCSP---IPQVGICVTECNVDQDCGAGRRCTSNGCGRVCSPP 1350
C V C VC P +P C + C C S C CS P
Sbjct: 302 CCRPS-SSVSLLCRPVCRPACCVPVPSCCAPTSSCQASCCRPASCVSLLCRPACSRP 357
Score = 71.2 bits (173), Expect = 3e-12
Identities = 99/384 (25%), Positives = 124/384 (32%), Gaps = 34/384 (8%)
Frame = +1
Query: 652 CREDRDCGSGHQCVRKGCGHVCAPVHQVGICVTECNVDQDCGEGRQCTSNGCGRVCSPVQ 831
C D GS C+ C C+ QV C C + C C S VC+PV
Sbjct: 9 CSSDLSYGS-RVCLPGSCDS-CSDSWQVDDCPESC-CEPPCCAPAPCLS----LVCTPVS 61
Query: 832 QEDVGICVTECKVDQDCGEGRRCTSNGCGRVCSP-VQQKEACEHQCREDRDCGSGHQCVR 1008
C C E C S GC C+P Q+ +C+ C C CV
Sbjct: 62 YVSSPCCRVTC-------EPSPCQS-GCTSSCTPSCCQQSSCQLACCASSPCQQAC-CVP 112
Query: 1009 KGCGHVCA-PVHQVDVGICVTECKVDQDCGEGRRCASNGCGRVCSPAQQREACEHQC*ED 1185
C VC PV+ CV C D C + C S C SP QQ C C +
Sbjct: 113 VCCKTVCCKPVY------CVPVCSGDSSCCQQSSCQSACC--TSSPCQQ-ACCVPICCKP 163
Query: 1186 KDCGSGHQCVRKG----------CGHVCSPIPQVGICVTECN---VDQDCGAGRRCTSNG 1326
G C ++ C VC P P C++ C Q CTS+
Sbjct: 164 VCSGISSSCCQQSSCVSCVSSPCCQAVCEPSPCQSGCISSCTPSCCQQSSCKPACCTSSP 223
Query: 1327 CGRVCSPP--------------QGGGLCVNRCRGNWDCGAGEECIRKGCGRVCSPAQEPV 1464
C + C P G C C + G C+ C VC PV
Sbjct: 224 CQQACCVPVCCKPVCCVPTCSDDSGSCCQPACCTSSQSQQG-CCVPVCCKPVCC---VPV 279
Query: 1465 VGICVDQCQRHWECGPRMRCVSTGCGHICSPAQD-----QVEQRPGKCPVLPKGTIGLCA 1629
C + C P C +T C C P+ + RP C +P CA
Sbjct: 280 CSGASTSCCQQSSCQP--ACCTTSC---CRPSSSVSLLCRPVCRPACCVPVP----SCCA 330
Query: 1630 EFCSGDDSCPSGQKCCSHGCGHSC 1701
S SC C S C +C
Sbjct: 331 PTSSCQASCCRPASCVSLLCRPAC 354
>ref|NP_001400.3| multiple epidermal growth factor-like domains protein 6 precursor
[Homo sapiens].
Length = 1541
Score = 75.5 bits (184), Expect = 2e-13
Identities = 135/539 (25%), Positives = 170/539 (31%), Gaps = 61/539 (11%)
Frame = +1
Query: 121 CVTECKVDQD---------CGAGRRCTSNGCGRVCSPIQQREACEHQCREDRDCGGGHQC 273
C T C D C T C R C C H C +C GH
Sbjct: 826 CQTRCSCANDGHCHPATGHCSCAPGWTGFSCQRACDTGHWGPDCSHPC----NCSAGHG- 880
Query: 274 VRKGCGHVCAPVHQVDVGICVMEC-----RVDQDCGEGRLCISNGCGRVCFPVRRREACE 438
C + G+C+ E R +Q C +G GC + C C+
Sbjct: 881 ---SCDAIS--------GLCLCEAGYVGPRCEQQCPQGHF--GPGCEQRC-------QCQ 920
Query: 439 HQCREDRDCGSGHQCVRRGCGHVCAPVHQVDVGICVTECRVDQDCGEGRLCISNGCGRVC 618
H D G+ C G C H G +CR +C G C + +C
Sbjct: 921 HGAACDHVSGAC-TCPAGWRGTFCE--HACPAGFFGLDCRSACNCTAGAACDAVNGSCLC 977
Query: 619 FPGRR-----EGCE-----HQCREDRDCGSGHQC--VRKGCGHVCAPVHQVGICVTECNV 762
GRR E C H C + C +G C V C CAP C+ C
Sbjct: 978 PAGRRGPRCAETCPAHTYGHNCSQACACFNGASCDPVHGQCH--CAPGWMGPSCLQACPA 1035
Query: 763 ---DQDCGEGRQCTSNGCGRVCSPVQ------QEDVGI-CVTECKVDQDCGEGRRCTSNG 912
+C C + G C PV + G+ C EC + +D G R S G
Sbjct: 1036 GLYGDNCRHSCLCQNGG---TCDPVSGHCACPEGWAGLACEKEC-LPRDVRAGCR-HSGG 1090
Query: 913 C--GRVCSPVQQKEACEHQCREDRDCGSGHQCVRKGCGHVCAPVHQVDVGICVTECKVDQ 1086
C G +C P + C D+ C S C+R G CA G
Sbjct: 1091 CLNGGLCDPHTGRCLCPAGWTGDK-CQS--PCLRGWFGEACAQRCSCPPGAACHHVTGAC 1147
Query: 1087 DCGEGRRCASNGCGRVCSPAQQREACEHQC*EDKDCGSGHQCVRKGCGHVCSPIPQVGIC 1266
C G +GC + C P E C C QC G C P C
Sbjct: 1148 RCPPG--FTGSGCEQACPPGSFGEDCAQMC----------QC--PGENPACHPATGTCSC 1193
Query: 1267 VTEC---NVDQDCGAGRRCTSNGCGRVCSPPQGG------GLCVNRCRGNW---DCGA-- 1404
+ Q C GR GC ++C GG G C RC + DC
Sbjct: 1194 AAGYHGPSCQQRCPPGR--YGPGCEQLCGCLNGGSCDAATGAC--RCPTGFLGTDCNLTC 1249
Query: 1405 -----GEECIRK-GCGRVCSPAQEPVVGICVDQCQR---HWECGPRMRCVSTGCGHICS 1554
G C GCG+ A +PV G C+ R E G GC H CS
Sbjct: 1250 PQGRFGPNCTHVCGCGQ--GAACDPVTGTCLCPPGRAGVRCERGCPQNRFGVGCEHTCS 1306
Score = 72.8 bits (177), Expect = 1e-12
Identities = 147/589 (24%), Positives = 191/589 (32%), Gaps = 74/589 (12%)
Frame = +1
Query: 160 GRRCTSN--------GCGRVCS-PIQQREACEHQCRE-DRDCGGGHQCVRKGCGHVCAPV 309
G RC + GC + C+ P+ AC+ E + C G Q + CG C
Sbjct: 679 GERCQAECELGYFGPGCWQACTCPVGV--ACDSVSGECGKRCPAGFQ--GEDCGQECP-- 732
Query: 310 HQVDVGICVMECRVDQDCGEGRLC--ISNGCGRVCFPVRRREACEHQCREDRDCGSGHQC 483
VG + C CG G C ++ C C P R E CE C E R G G Q
Sbjct: 733 ----VGTFGVNCSSSCSCG-GAPCHGVTGQCR--CPPGRTGEDCEADCPEGR-WGLGCQE 784
Query: 484 VRRGCGHV--CAPVHQVDVGICVTECRVDQDCGEGRLCISNGCGRVCFPG-RREGCEHQ- 651
+ C H C P + G C+ C G + + C VC G C+ +
Sbjct: 785 ICPACQHAARCDP----ETGACL--------CLPG--FVGSRCQDVCPAGWYGPSCQTRC 830
Query: 652 -CREDRDC--GSGH-QCVRKGCGHVCAPVHQVGICVTECNVDQDCGEGR----------Q 789
C D C +GH C G C G +C+ +C G
Sbjct: 831 SCANDGHCHPATGHCSCAPGWTGFSCQRACDTGHWGPDCSHPCNCSAGHGSCDAISGLCL 890
Query: 790 CTSNGCGRVCSPVQQEDVGICVTECKVDQDCGEGRRCTSNGCGRVCSPVQQKEACEH--- 960
C + G C QQ G C+ C G C C + CEH
Sbjct: 891 CEAGYVGPRCE--QQCPQGHFGPGCEQRCQCQHGAACDHVSGACTCPAGWRGTFCEHACP 948
Query: 961 ------QCREDRDCGSGHQC-----------VRKG--CGHVCAPVHQVDVGICVTECKVD 1083
CR +C +G C R+G C C P H C C
Sbjct: 949 AGFFGLDCRSACNCTAGAACDAVNGSCLCPAGRRGPRCAETC-PAHTYGHN-CSQACA-- 1004
Query: 1084 QDCGEGRRC-------------ASNGCGRVCSPAQQREACEHQC*EDKDCGSGHQCVRKG 1224
C G C C + C + C H C C +G C
Sbjct: 1005 --CFNGASCDPVHGQCHCAPGWMGPSCLQACPAGLYGDNCRHSC----LCQNGGTC-DPV 1057
Query: 1225 CGHVCSPIPQVGI-CVTECNVDQDCGAGRRCTSNGC--GRVCSPPQGGGLCVNRCRGNWD 1395
GH P G+ C EC + +D AG R S GC G +C P G LC G+
Sbjct: 1058 SGHCACPEGWAGLACEKEC-LPRDVRAGCR-HSGGCLNGGLCDPHTGRCLCPAGWTGD-- 1113
Query: 1396 CGAGEECIRKGCGRVCSPAQEPVVGICVDQCQRHWECGPRMRCVSTGCGHICSPAQ---- 1563
C+R G C+ G C P +GC C P
Sbjct: 1114 -KCQSPCLRGWFGEACAQRCSCPPGAACHHVTGACRCPPGF--TGSGCEQACPPGSFGED 1170
Query: 1564 -DQVEQRPGKCPVLPKGTIGLCAEFCSGDDSCPSGQKCCSHG-CGHSCQ 1704
Q+ Q PG+ P T G C+ C+ PS Q+ C G G C+
Sbjct: 1171 CAQMCQCPGENPACHPAT-GTCS--CAAGYHGPSCQQRCPPGRYGPGCE 1216
Score = 69.7 bits (169), Expect = 9e-12
Identities = 130/534 (24%), Positives = 168/534 (31%), Gaps = 34/534 (6%)
Frame = +1
Query: 121 CVTECKVDQDCGAGRRCTSNGC--GRVCSPIQQREACEHQCREDRDCGGGHQCVRKGCGH 294
C EC + +D AG R S GC G +C P R C D+ C C+R G
Sbjct: 1072 CEKEC-LPRDVRAGCR-HSGGCLNGGLCDPHTGRCLCPAGWTGDK-CQS--PCLRGWFGE 1126
Query: 295 VCAPVHQVDVGICVMECRVDQDCGEGRLCISNGCGRVCFPVRRREACEHQCREDRDCGSG 474
CA G C G +GC + C P E C C
Sbjct: 1127 ACAQRCSCPPGAACHHVTGACRCPPG--FTGSGCEQACPPGSFGEDCAQMC--------- 1175
Query: 475 HQCVRRGCGHVCAPVHQVDVGICVTECRVDQDCGEGRLCISNGCGRVCFPGRR-EGCEHQ 651
QC G C P G C C G S C + C PGR GCE
Sbjct: 1176 -QCP--GENPACHPA----TGTC--------SCAAGYHGPS--CQQRCPPGRYGPGCEQL 1218
Query: 652 CREDRDCGSGHQCVRKGCGHVCAPVHQVGICVTECNVDQDCGEGRQCTSNGCGRVCSPVQ 831
C C +G C C G T+CN+ C +GR C VC
Sbjct: 1219 C----GCLNGGSCDAATGACRCP----TGFLGTDCNLT--CPQGR--FGPNCTHVCG--- 1263
Query: 832 QEDVGICVTECKVDQDCGEGRRCTSNGCGRVCSPVQQKEACEHQCREDRDCGSGHQCVRK 1011
CG+G C +C P + CE C ++R
Sbjct: 1264 ----------------CGQGAACDPVTGTCLCPPGRAGVRCERGCPQNR--------FGV 1299
Query: 1012 GCGHVCAPVHQVDVGICVTECKVDQDCGEGRRCASNGCGRVCSPAQQREACEHQC*EDKD 1191
GC H C+ + G+C + C G C C P + AC +C +
Sbjct: 1300 GCEHTCSCRNG---GLCHAS---NGSCSCGLGWTGRHCELACPPGRYGAACHLECSCHNN 1353
Query: 1192 ---------CGSGHQCVRKGCGHVCSP----IPQVGICVTECNVDQDCGAGRRCTSNG-- 1326
C G + C H C P G+C + D +GR G
Sbjct: 1354 STCEPATGTCRCGPGFYGQACEHPCPPGFHGAGCQGLCWCQHGAPCDPISGRCLCPAGFH 1413
Query: 1327 ---CGRVCSPPQGGGLCVNRCRGNWDCGAGEECIRKGCGRVCSPAQEPVV-------GIC 1476
C R C P G C RC DC G C +C P + G
Sbjct: 1414 GHFCERGCEPGSFGEGCHQRC----DCDGGAPCDPVTGLCLCPPGRSGATCNLDCRRGQF 1469
Query: 1477 VDQCQRHWECGPRMRC--VSTGC----GHICSPAQDQVEQRPGKCPVLPKGTIG 1620
C H +CG C VS C G++ ++ R + P L +G+ G
Sbjct: 1470 GPSCTLHCDCGGGADCDPVSGQCHCVDGYMGPTCREGGPLRLPENPSLAQGSAG 1523
Score = 58.5 bits (140), Expect = 2e-08
Identities = 145/643 (22%), Positives = 194/643 (30%), Gaps = 96/643 (14%)
Frame = +1
Query: 100 QAVDVGICVTECKVDQDCGAGRRCTSNGCGRV-CSPIQQREACEHQCREDRDCGGG--HQ 270
Q+ +
Sbjct: 234 GRRCV------------RRNPCA-----DRNGGCMHRCRALRGLAHCECRAGYQLAVDRK 276
Query: 1273 ECNVDQDCGAGRRCTSNGCGRVCSPPQGGGLCVNRCRGNWDCGA-GEECIR--------- 1422
C +C G ++GC G CV C ++ GA G +C R
Sbjct: 277 ACEDVDECATGLAQCAHGCLNT----HGSFKCV--CNAGYELGADGRQCYRIEMEIVNSC 330
Query: 1423 ----KGCGRVCSPAQEPVVGIC-----VDQCQRHWECGPRMRCVSTGCGHICSPAQDQVE 1575
GC CS + V C +D+ QR C C ++ C Q
Sbjct: 331 EADNGGCSHGCSHSSAGPVCTCPHGYELDEDQR--TCIDVDDCAASPC------CQQVCT 382
Query: 1576 QRPGKCPVLPKGTIGLCAEFCSGDD--SCPSGQKCCSHGCGH 1695
PG L A+ C +D C SG+ C H C +
Sbjct: 383 NSPGGYECSCYAGYRLSADGCGCEDVDECASGRGGCEHHCAN 424
>ref|XP_873582.3| PREDICTED: multiple epidermal growth factor-like domains 6-like [Bos
taurus].
Length = 1517
Score = 79.0 bits (193), Expect = 1e-14
Identities = 144/599 (24%), Positives = 183/599 (30%), Gaps = 74/599 (12%)
Frame = +1
Query: 118 ICVTECKVD---QDCGAGRRCTSNG-CGRV-----CSPIQQREACEHQCRED---RDCGG 261
+C C D ++C C + G C V C P CE C + + C
Sbjct: 545 VCNETCPPDTFGKNCSFSCSCQNGGTCDPVTGACRCPPGVGGAHCEDGCPKGFYGKHCRK 604
Query: 262 GHQCVRKGCGHVCAPVHQVDVGI-----------------CVMECRVDQDCGEGRLCISN 390
C +G H D G+ C EC+ +Q R C
Sbjct: 605 KCHCANRGRCHRLYGACLCDPGLYGRFCHLACPPWAFGPGCSEECKCEQQ--NTRACDKR 662
Query: 391 GCGRVCFPVRRREACEHQC---------REDRDCGSGHQC--VRRGCGHVC-APVHQVDV 534
C R E C+ +C R+ C G C V CG C A H D
Sbjct: 663 DGSCACKAGFRGEWCQDECQPGFFGPGCRQACTCPPGVACDPVSGECGKQCPAGYHGEDC 722
Query: 535 GICVTECRVDQDCGEGRLCISNGCGRV-----CFPGRR-EGCEHQCREDRDCGSGHQCVR 696
G Q+C C C RV C PGR + C C E R
Sbjct: 723 GQECPAGTFGQNCSGSCSCGDAPCDRVTGQCLCPPGRTGDDCGADCPEGR--------WG 774
Query: 697 KGCGHVCAPVHQVGICVTECNVDQDCGEGRQCTSNGCGRVCSPVQQEDVGICVTECKVDQ 876
GC +C P CV E C G + C C P G C T+C
Sbjct: 775 LGCQEICPPCEHGAACVPETGACL-CRPG--FMGSRCQDAC-PAGWFGPG-CQTQCSCAN 829
Query: 877 D---------CGEGRRCTSNGCGRVCSPVQQKEACEHQCREDRDCGSGHQCVRKGCGHVC 1029
D C T C R C C C +C +GH GC V
Sbjct: 830 DGLCHPVTGRCSCAPGWTGLSCQRACDSGHWGPDCSFTC----NCSAGH----GGCDAVS 881
Query: 1030 APVHQVDVGICVTEC-----KVDQDCGEGRRCASNGCGRVCSPAQQREACEHQC*EDKDC 1194
G+CV E + +Q C +G GCGR C + AC+H
Sbjct: 882 --------GLCVCEAGYVGPRCEQRCPQG--YFGPGCGRQCQ-CEHGAACDH-------V 923
Query: 1195 GSGHQCVRKGCGHVCSPIPQVGICVTECNVDQDCGAGRRCTSNGCGRVCSPPQGGGLCVN 1374
C G C G +C DC AG C +C + G C
Sbjct: 924 SGACTCPAGWRGTFCERACPAGFFGVDCGHACDCSAGVPCDPVSGSCLCPSGRQGPRCAQ 983
Query: 1375 RCRGNWDCGAGEECIRKGCGRVCSPAQEPVVGICVDQCQRHWECGPRMRCVSTG-----C 1539
C + G C + C + +PV G C +C W ++ G C
Sbjct: 984 TCPAHM---FGHNC-SQACSCFNGASCDPVHGQC--RCGPGWTGPTCLQACPEGLYGEDC 1037
Query: 1540 GHICSPAQDQVEQRPGKC-PV-----LPKGTIGLCAEFCSGDDSCPSG--QKCCSHGCG 1692
H C + Q G C PV P+G GL E C G + C H CG
Sbjct: 1038 QHSC------LCQNGGSCDPVSGHCTCPEGWAGLACE-----KECLPGVFEVGCPHSCG 1085
Score = 77.0 bits (188), Expect = 6e-14
Identities = 149/638 (23%), Positives = 202/638 (31%), Gaps = 118/638 (18%)
Frame = +1
Query: 151 CGAGRRCTSNGCGRVCSPIQQ----REACEHQCRE-----DRDCGGGHQCV--RKGC--- 288
C AG R +++GCG C + + R CEH C C G+Q R+GC
Sbjct: 392 CYAGYRLSADGCG--CEDVDECASGRGGCEHHCANLAGSFQCSCEAGYQLDEDRRGCTSL 449
Query: 289 --------GHVCAPVHQVDVGICVM--------------------ECRVDQDCGEGRLCI 384
GH+ P+ + + + V+ E R + E +C+
Sbjct: 450 ELPELVLDGHL--PLGRPPLHVAVLQDELPHLFQDDYVGAEEEEAEARGEHTLQEKYVCL 507
Query: 385 SN----GCGRVCFPVRRREACEHQCREDRDCGSGHQCVRRGCGHVCAPVHQVDVGICVTE 552
+ C C R C + DC G + C C P
Sbjct: 508 DDTFGPDCSLTCDDCRNGGTCLPTL-DSCDCPDGWTGLV--CNETCPP------DTFGKN 558
Query: 553 CRVDQDCGEGRLC--ISNGCGRVCFPGR-----REGCEH-----QCREDRDCGSGHQCVR 696
C C G C ++ C C PG +GC CR+ C + +C R
Sbjct: 559 CSFSCSCQNGGTCDPVTGACR--CPPGVGGAHCEDGCPKGFYGKHCRKKCHCANRGRCHR 616
Query: 697 KGCGHVCAPVHQVGICVTECNVDQDCGEGRQCTSNGCGRVCSPVQQEDVGICVTECKVDQ 876
+C P C C GC C +Q++ C K D
Sbjct: 617 LYGACLCDPGLYGRFCHLACPP--------WAFGPGCSEECK-CEQQNTRACD---KRDG 664
Query: 877 DCGEGRRCTSNGCGRVCSPVQQKEACEHQCREDRDCGSGHQC--VRKGCGHVC-APVHQV 1047
C C + G C Q CR+ C G C V CG C A H
Sbjct: 665 SCA----CKAGFRGEWCQDECQPGFFGPGCRQACTCPPGVACDPVSGECGKQCPAGYHGE 720
Query: 1048 DVGICVTECKVDQDCGEGRRCASNGCGRV-----CSPAQQREACEHQC*EDKDCGSGHQC 1212
D G Q+C C C RV C P + + C C E + G G Q
Sbjct: 721 DCGQECPAGTFGQNCSGSCSCGDAPCDRVTGQCLCPPGRTGDDCGADCPEGR-WGLGCQE 779
Query: 1213 VRKGCGHVCSPIPQVGICVTE-----CNVDQDCGAGR---------RCTSNGC-----GR 1335
+ C H + +P+ G C+ C AG C ++G GR
Sbjct: 780 ICPPCEHGAACVPETGACLCRPGFMGSRCQDACPAGWFGPGCQTQCSCANDGLCHPVTGR 839
Query: 1336 V-CSPPQGGGLCVNRC-RGNW--DCGAGEECI--RKGCGRV---CSPAQEPVVGICVDQC 1488
C+P G C C G+W DC C GC V C V C +C
Sbjct: 840 CSCAPGWTGLSCQRACDSGHWGPDCSFTCNCSAGHGGCDAVSGLCVCEAGYVGPRCEQRC 899
Query: 1489 QRHW---ECGPRMRCV-STGCGHICSPAQDQVEQRPGKCP-VLPKGTIGL-CAEFC---- 1638
+ + CG + +C C H+ R C P G G+ C C
Sbjct: 900 PQGYFGPGCGRQCQCEHGAACDHVSGACTCPAGWRGTFCERACPAGFFGVDCGHACDCSA 959
Query: 1639 -------SGDDSCPSG-------QKCCSHGCGHSCQTA 1710
SG CPSG Q C +H GH+C A
Sbjct: 960 GVPCDPVSGSCLCPSGRQGPRCAQTCPAHMFGHNCSQA 997
Score = 73.6 bits (179), Expect = 6e-13
Identities = 124/524 (23%), Positives = 157/524 (29%), Gaps = 47/524 (8%)
Frame = +1
Query: 139 VDQDCGAGRRCTSNGCGRVCSPIQQREACEHQC--REDRDCG--GGHQCVRKG-----CG 291
V C G T C + C E C+H C + C GH +G C
Sbjct: 1009 VHGQCRCGPGWTGPTCLQACPEGLYGEDCQHSCLCQNGGSCDPVSGHCTCPEGWAGLACE 1068
Query: 292 HVCAPVHQVDVGICVMECRVDQDCGEGRLC-------------ISNGCGRVCFPVRRREA 432
C P G+ + C C G LC + C C P EA
Sbjct: 1069 KECLP------GVFEVGCPHSCGCLNGGLCDPHTVHCLCPAGWTGDKCQSSCPPSWFGEA 1122
Query: 433 CEHQCREDRDCGSGHQCVRRGCGHVCAPVHQVDVGICVTECRVDQDCGEGRLCISNGCGR 612
C +C+ C G C HV H G C +Q C G CG+
Sbjct: 1123 CAQRCQ----CPPG-----AACHHVTGECH-CPPGFTGPSC--EQACPPGTF--GERCGQ 1168
Query: 613 VCF-PGRREGCEHQCREDRDCGSGHQCVRKGCGHVCAPVHQVGICVTECNVDQDCGEGRQ 789
C PG + C H C G+ GC C P C C C G
Sbjct: 1169 QCHCPGENQAC-HPASGTCACAPGYHGA--GCQQRCPPGRFGPGCELLCG----CLNGGS 1221
Query: 790 CTS-NGCGRVCSPVQQEDVGICVTE------CKVDQDCGEGRRCTSNGCGRVCSPVQQKE 948
C + G R + D + C CG+G C C P +
Sbjct: 1222 CDAVTGACRCPAGFLGTDCSLACPHGRFGPGCAYVCGCGQGAACDPVTGSCSCPPGRTGV 1281
Query: 949 ACEHQCREDR---------DCGSGHQCVRK----GCGHVCAPVH---QVDVGICVTECKV 1080
CEH C ++R C +G C CG H G C +
Sbjct: 1282 HCEHGCPQNRFGVNCEHACSCRNGGLCHATNGSCSCGLGWTGPHCELACPAGRYGAACSL 1341
Query: 1081 DQDCGEGRRCASNGCGRVCSPAQQREACEHQC*EDKDCGSGHQCVRKGCGHVCSPIPQVG 1260
+ C C C P +ACEH C Q + G C P+ G
Sbjct: 1342 ECSCHNHGACEPTSGACRCGPGFYGQACEHSCPPGFHGAGCQQTCQCQHGAPCDPVS--G 1399
Query: 1261 ICVTECNVDQDCGAGRRCTSNGCGRVCSPPQGGGLCVNRCRGNWDCGAGEECIRKGCGRV 1440
C+ C AG C R C P G C +C DC G C +
Sbjct: 1400 QCL--------CPAGLH--GQFCERGCEPGSFGEGCGQQC----DCELGVPCDPVTGHCL 1445
Query: 1441 CSPAQEPVVGICVDQCQR-HWECGPRMRCVSTGCGHICSPAQDQ 1569
C P + C C+R + G + C S G G C P Q
Sbjct: 1446 CPPGRTGTT--CDLGCRRGFFGPGCALHC-SCGGGADCDPVSGQ 1486
Score = 73.2 bits (178), Expect = 8e-13
Identities = 136/606 (22%), Positives = 176/606 (29%), Gaps = 85/606 (14%)
Frame = +1
Query: 151 CGAGRRCTSNGCGRVCSPIQQREACEHQCREDRDCGGGHQCVRKGCGHVCAPVHQVDVGI 330
C AG ++G R C I+ + C D G H C G VC H ++
Sbjct: 306 CNAGYELGADG--RQCYRIEMEIV--NSCEADNG-GCSHGCSHSSAGPVCTCPHGYELDE 360
Query: 331 CVMECRVDQDCGEGRLC---ISNGCGRV---CFPVRRREACEHQCREDRDCGSGHQCVRR 492
C DC C +N G C+ R A C + +C SG R
Sbjct: 361 DQRTCIDVDDCAASPCCQQVCTNSPGGYECSCYAGYRLSADGCGCEDVDECASG----RG 416
Query: 493 GCGHVCAPVHQVDVGICVTECRVDQDCGEGRLCISNGCGRVCFPGR-------------R 633
GC H CA + C ++D+D R C S + G +
Sbjct: 417 GCEHHCANLAGSFQCSCEAGYQLDED---RRGCTSLELPELVLDGHLPLGRPPLHVAVLQ 473
Query: 634 EGCEHQCREDRDCGSGHQCVRKG------------------CGHVCAPVHQVGICVTECN 759
+ H ++D + +G C C G C+ +
Sbjct: 474 DELPHLFQDDYVGAEEEEAEARGEHTLQEKYVCLDDTFGPDCSLTCDDCRNGGTCLPTLD 533
Query: 760 VDQDCGEGRQCTSNGCGRVCSPVQQEDVGICVTECKVDQDCGEGRRCTSNGCGRVCSPVQ 939
DC +G T C C P + G C C G C C P
Sbjct: 534 -SCDCPDG--WTGLVCNETCPP---DTFG---KNCSFSCSCQNGGTCDPVTGACRCPPGV 584
Query: 940 QKEACEHQCRED---RDCGSGHQCVRKGCGHVCAPVHQVDVGI----------------- 1059
CE C + + C C +G H D G+
Sbjct: 585 GGAHCEDGCPKGFYGKHCRKKCHCANRGRCHRLYGACLCDPGLYGRFCHLACPPWAFGPG 644
Query: 1060 CVTECKVDQDCGEGRRCASNGCGRVCSPAQQREACEHQC*---------EDKDCGSGHQC 1212
C ECK +Q R C C + E C+ +C + C G C
Sbjct: 645 CSEECKCEQQ--NTRACDKRDGSCACKAGFRGEWCQDECQPGFFGPGCRQACTCPPGVAC 702
Query: 1213 --VRKGCGHVCSPIPQVGICVTEC---NVDQDCGAGRRCTSNGCGRV-----CSPPQGGG 1362
V CG C C EC Q+C C C RV C P + G
Sbjct: 703 DPVSGECGKQCPAGYHGEDCGQECPAGTFGQNCSGSCSCGDAPCDRVTGQCLCPPGRTGD 762
Query: 1363 LCVNRC-RGNWDCGAGEECIRKGCGRVCSPAQEPVV-------GICVDQCQRHWECGPRM 1518
C C G W G E C G C P + C D C W GP
Sbjct: 763 DCGADCPEGRWGLGCQEICPPCEHGAACVPETGACLCRPGFMGSRCQDACPAGW-FGP-- 819
Query: 1519 RCVSTGCGHICSPAQDQV-EQRPGKCPVLPKGTIGLCAEFCSGDDSCPSGQKCCSHGCGH 1695
GC CS A D + G+C P T C C P C+ GH
Sbjct: 820 -----GCQTQCSCANDGLCHPVTGRCSCAPGWTGLSCQRACDSGHWGPDCSFTCNCSAGH 874
Query: 1696 SCQTAV 1713
AV
Sbjct: 875 GGCDAV 880
Score = 72.0 bits (175), Expect = 2e-12
Identities = 144/623 (23%), Positives = 199/623 (31%), Gaps = 100/623 (16%)
Frame = +1
Query: 133 CKVDQDCGAGRRCTSNGCGRVCSPI---QQREAC--EHQCREDRDCGGGHQCVRK----- 282
C C G + GC C + Q R C E Q +ED G +CVR+
Sbjct: 195 CLAINSCAVG----NGGCQHNCVQLTVTQHRCQCRPEFQLQED-----GRRCVRRNPCAD 245
Query: 283 ---GCGHVCAPVHQVDVGICVMECR------VDQ-------DCGEGRLCISNGC------ 396
GC H C + G+ ECR VD+ +C G ++GC
Sbjct: 246 RNGGCMHRCRALR----GLAHCECRAGYQLAVDRKACEDVDECATGLAQCAHGCLNTHGS 301
Query: 397 --------------GRVCFPVRRREACEHQCREDRDCGSGHQCVRRGCGHVCAPVHQVDV 534
GR C+ + + C D G H C G VC H ++
Sbjct: 302 FKCVCNAGYELGADGRQCYRIEMEIV--NSCEADNG-GCSHGCSHSSAGPVCTCPHGYEL 358
Query: 535 GICVTECRVDQDCGEGRLC---ISNGCGRV---CFPGRR---EGCEHQCREDRDCGSGHQ 687
C DC C +N G C+ G R +GC C + +C SG
Sbjct: 359 DEDQRTCIDVDDCAASPCCQQVCTNSPGGYECSCYAGYRLSADGC--GCEDVDECASG-- 414
Query: 688 CVRKGCGHVCAPVHQVGICVTECNVDQDCGEGRQCTSNGCGRVC----SPVQQEDVGICV 855
R GC H CA + C E D + R CTS + P+ + + + V
Sbjct: 415 --RGGCEHHCANLAGSFQCSCEAGYQLD-EDRRGCTSLELPELVLDGHLPLGRPPLHVAV 471
Query: 856 TECKV-----------DQDCGEGRRCTSNGCGRVCSPVQQKEACEHQCREDRDCGS---- 990
+ ++ +++ E R + VC C C + R+ G+
Sbjct: 472 LQDELPHLFQDDYVGAEEEEAEARGEHTLQEKYVCLDDTFGPDCSLTCDDCRNGGTCLPT 531
Query: 991 --GHQCVRKGCGHVCAPVHQVDVGICVTECKVDQDCGEGRRCASNGCGRVCSPAQQREAC 1164
C G VC D C C G C C P C
Sbjct: 532 LDSCDCPDGWTGLVCNETCPPDT--FGKNCSFSCSCQNGGTCDPVTGACRCPPGVGGAHC 589
Query: 1165 EHQC*E---DKDCGSGHQCVRKGCGH------VCSPIPQVGICVTEC---NVDQDCGAGR 1308
E C + K C C +G H +C P C C C
Sbjct: 590 EDGCPKGFYGKHCRKKCHCANRGRCHRLYGACLCDPGLYGRFCHLACPPWAFGPGCSEEC 649
Query: 1309 RCTSNGCGRVCSPPQGGGLCVNRCRGNW---DCGAGEECIRKGCGRVCS----PAQEPVV 1467
+C R C G C RG W +C G GC + C+ A +PV
Sbjct: 650 KCEQQNT-RACDKRDGSCACKAGFRGEWCQDECQPG--FFGPGCRQACTCPPGVACDPVS 706
Query: 1468 GICVDQCQRHW---ECGPRMRCVSTG--CGHICSPAQDQVEQRPGKCPVLPKGTIGLCAE 1632
G C QC + +CG + G C CS ++ G+C + P G G +
Sbjct: 707 GECGKQCPAGYHGEDCGQECPAGTFGQNCSGSCSCGDAPCDRVTGQC-LCPPGRTG---D 762
Query: 1633 FCSGDDSCPSGQKCCSHGCGHSC 1701
C D CP G+ GC C
Sbjct: 763 DCGAD--CPEGR--WGLGCQEIC 781
Score = 55.5 bits (132), Expect = 2e-07
Identities = 94/402 (23%), Positives = 137/402 (34%), Gaps = 27/402 (6%)
Frame = +1
Query: 571 CGEGRLCISNGCGRVCFPGRREGCEHQCREDRDC--GSGHQCVRKGCGHVCAPVHQVGIC 744
CG C+S+ V + G R+ + + C G Q +GC +PV G+C
Sbjct: 72 CGRQAWCVSHERRTVYYTGYRQVYSTEAQTVFRCCPGWSQQPGSQGC---LSPVCSSGLC 128
Query: 745 VTECNVDQDCGEGRQCTSNGCGRVCSPVQQEDVGICVTECKVDQDCGEGRRC--TSNGCG 918
+ + +C S G C Q DV EC+V G RC T
Sbjct: 129 FNGGHCVSGSAQPCRCPSGFQGPRC----QHDVD----ECQVHNG-GCQHRCVNTPGSYF 179
Query: 919 RVCSPVQQKEACEHQCREDRDCGSGHQCVRKGCGHVCAPVHQVDVGICVTECKVDQDCGE 1098
C P + A C C G+ + C + H+ C E ++ +D
Sbjct: 180 CECKPGFRLHADGRTCLAINSCAVGNGGCQHNCVQLTVTQHRCQ---CRPEFQLQED--- 233
Query: 1099 GRRCASNGCGRVCSPAQQREACEHQC*EDKDCGSGHQC-VRKGCGHV-CSPIPQVGICVT 1272
GRRC +R C D++ G H+C +G H C Q+ +
Sbjct: 234 GRRCV------------RRNPCA-----DRNGGCMHRCRALRGLAHCECRAGYQLAVDRK 276
Query: 1273 ECNVDQDCGAGRRCTSNGCGRVCSPPQGGGLCVNRCRGNWDCGA-GEECIR--------- 1422
C +C G ++GC G CV C ++ GA G +C R
Sbjct: 277 ACEDVDECATGLAQCAHGCLNT----HGSFKCV--CNAGYELGADGRQCYRIEMEIVNSC 330
Query: 1423 ----KGCGRVCSPAQEPVVGIC-----VDQCQRHWECGPRMRCVSTGCGHICSPAQDQVE 1575
GC CS + V C +D+ QR C C ++ C Q
Sbjct: 331 EADNGGCSHGCSHSSAGPVCTCPHGYELDEDQR--TCIDVDDCAASPC------CQQVCT 382
Query: 1576 QRPGKCPVLPKGTIGLCAEFCSGDD--SCPSGQKCCSHGCGH 1695
PG L A+ C +D C SG+ C H C +
Sbjct: 383 NSPGGYECSCYAGYRLSADGCGCEDVDECASGRGGCEHHCAN 424
Database: RefSeq49_BP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 17,681,374
Number of sequences in database: 33,088
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33088
Number of Hits to DB: 94,218,865
Number of extensions: 3457185
Number of successful extensions: 15576
Number of sequences better than 1.0e-05: 82
Number of HSP's gapped: 14023
Number of HSP's successfully gapped: 194
Length of query: 663
Length of database: 17,681,374
Length adjustment: 109
Effective length of query: 554
Effective length of database: 14,074,782
Effective search space: 7797429228
Effective search space used: 7797429228
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Q + G EC C G RC C P Q C++ E R GG H+
Sbjct: 117 QPDEEGCLSAECSASL-CFHGGRCVPGSAQPCHCPPGFQGPRCQYDVDECRTHNGGCQHR 175
Query: 271 CVRKGCGHVCAPVHQVDVGICVMECRVDQDCGEGRLCISNGCGRVCFPV---RRREACE- 438
CV ++C + C C G + GC C + R R C
Sbjct: 176 CVNTPGSYLCECKPGFRLHTDSRTCLAINSCALG----NGGCQHHCVQLTITRHRCQCRP 231
Query: 439 -HQCREDRDCGSGHQCVRRG--------CGHVCAPVHQVDVGICVTECRVD-QDCGEGRL 588
Q +ED G CVRR C H C QV G+ EC V Q +G+
Sbjct: 232 GFQLQED-----GRHCVRRSPCANRNGSCMHRC----QVVRGLARCECHVGYQLAADGKA 282
Query: 589 CISNGCGRVCFPGRREGCEHQCREDRD-CGSGHQCVRKGCGHVCAPVHQVGICVTECNVD 765
C ED D C +G C H C CV C+
Sbjct: 283 C----------------------EDVDECAAG----LAQCAHGCLNTQGSFKCV--CHAG 314
Query: 766 QDCGEGRQCTSNGCGRVCSPVQQEDVGICVTECKVDQDCGEGRRCTSNGCGRVCSPVQQK 945
+ G GR C ++ E V C + C G TS G C +
Sbjct: 315 YELGAD--------GRQCYRIEMEIVNSCEAN---NGGCSHGCSHTSAGPLCTCPRGYEL 363
Query: 946 EACEHQCREDRDCGSGHQCVRKGC-----GHVCAPVHQVDVGICVTECKVDQDCGEGRRC 1110
+ + C + DC C ++ C G+ C C G R
Sbjct: 364 DTDQRTCIDVDDCADS-PCCQQVCTNNPGGYECG-------------------CYAGYRL 403
Query: 1111 ASNGCG--RVCSPAQQREACEHQC*E-----DKDCGSGHQC--VRKGCGHV--------- 1236
+++GCG V A R CEH C C +G++ R+GC +
Sbjct: 404 SADGCGCEDVDECASSRGGCEHHCTNLAGSFQCSCEAGYRLHEDRRGCSPLEEPMVDLDG 463
Query: 1237 ----CSPIPQVGICVTECN---VDQDCGAGRR---------------CTSNG----CGRV 1338
P+P + + E D D GA C + C
Sbjct: 464 ELPFVRPLPHIAVLQDELPQLFQDDDVGADEEEAELRGEHTLTEKFVCLDDSFGHDCSLT 523
Query: 1339 CSPPQGGGLCVNRCRGNWDCGAG-------EEC----IRKGCGRVCSPAQ----EPVVGI 1473
C + GG C+ G DC G E C K C CS + V G
Sbjct: 524 CDDCRNGGTCLLGLDG-CDCPEGWTGLICNETCPPDTFGKNCSFSCSCQNGGTCDSVTGA 582
Query: 1474 -----------CVDQCQRHW---ECGPRMRCVSTGCGHICSPAQDQVEQRPGKCPVLPKG 1611
C D C + + C + C + G H + G C P
Sbjct: 583 CRCPPGVSGTNCEDGCPKGYYGKHCRKKCNCANRGRCH----------RLYGACLCDP-- 630
Query: 1612 TIGLCAEFCSGDDSCPSGQKCCSHGCGHSCQTAVPDEKTFPSR 1740
GL FC +CP GC CQ P ++ R
Sbjct: 631 --GLYGRFC--HLTCPPW--AFGPGCSEECQCVQPHTQSCDKR 667
Database: RefSeq49_HP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,297,164
Number of sequences in database: 32,964
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 32964
Number of Hits to DB: 96,380,759
Number of extensions: 3500038
Number of successful extensions: 15434
Number of sequences better than 1.0e-05: 82
Number of HSP's gapped: 13986
Number of HSP's successfully gapped: 166
Length of query: 663
Length of database: 18,297,164
Length adjustment: 109
Effective length of query: 554
Effective length of database: 14,704,088
Effective search space: 8146064752
Effective search space used: 8146064752
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ITT01_0011_G11
(1989 letters)
Database: RefSeq49_CP.fasta
33,336 sequences; 18,874,504 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_546739.2| PREDICTED: similar to EGF-like-domain, multiple... 94 4e-19
Alignment gi|NP_001182078.1| tenascin [Canis lupus familiaris]. 88 3e-17
Alignment gi|XP_538245.2| PREDICTED: similar to Low-density lipoprotein r... 83 9e-16
Alignment gi|XP_547524.2| PREDICTED: similar to MEGF10 protein [Canis fam... 83 9e-16
Alignment gi|XP_535946.2| PREDICTED: similar to Low-density lipoprotein r... 81 4e-15
Alignment gi|XP_531893.2| PREDICTED: similar to MEGF10 protein [Canis fam... 75 2e-13
Alignment gi|XP_533538.2| PREDICTED: similar to Very low-density lipoprot... 75 2e-13
Alignment gi|XP_544929.2| PREDICTED: similar to keratin associated protei... 74 4e-13
Alignment gi|XP_858190.1| PREDICTED: similar to notch 2 preproprotein iso... 74 5e-13
Alignment gi|XP_858228.1| PREDICTED: similar to notch 2 preproprotein iso... 74 7e-13
>ref|XP_546739.2| PREDICTED: similar to EGF-like-domain, multiple 3 [Canis familiaris].
Length = 1534
Score = 94.4 bits (233), Expect = 4e-19
Identities = 148/606 (24%), Positives = 188/606 (31%), Gaps = 76/606 (12%)
Frame = +1
Query: 100 QAVDVGICVTECKVDQDCGAGRRCTSNGCGRVCSPIQQREACEHQCREDRDCGGGHQCVR 279
+A G +C+ DC AG C S +C +Q C+ C GH C +
Sbjct: 911 RACPAGFFGLDCRGVCDCAAGAPCDSVSGSCLCPAGRQGPRCDQACPAHT---YGHNCSQ 967
Query: 280 K-GC--GHVCAPVH-QVDVG------ICVMEC---RVDQDCGEGRLCISNG--------- 393
C G C PVH Q G C+ C Q+C LC G
Sbjct: 968 TCSCFNGASCDPVHGQCHCGPGWMGSTCLEACPTGSYGQNCQHTCLCQHGGTCDPVSGHC 1027
Query: 394 ----------CGRVCFPVRRREACEHQCREDRDCGSGHQCVRRG-------------CGH 504
C C P R C+H CR C +G C RR C
Sbjct: 1028 TCPEGWTGLACEEECLPGRFGAGCKHSCR----CLNGGDCDRRSGRCLCPAGWTGDQCQS 1083
Query: 505 VCAPVHQVDVGICVTECRVDQDCGEGRLC--ISNGCGRVCFPG-RREGCEHQCREDRDCG 675
+CA G C C G C ++ C +C PG R CE+ C
Sbjct: 1084 LCAE------GTFGVRCEEHCACRRGATCHHVTGAC--LCPPGWRGSRCENACPHG---W 1132
Query: 676 SGHQCVRK-GCGHVCAPVHQVGIC-----VTECNVDQDC-----GE--GRQCTSNGCGRV 816
G C ++ C A H G C T +Q C GE G++C G +
Sbjct: 1133 FGEACAQRCQCPPGAACHHVTGECRCPRGFTGPGCEQACPPGTFGESCGQKCHCPGENQA 1192
Query: 817 CSPVQQEDVGICVTECKVDQDCGEGRRCTSNGCGRVCSPVQQKEACEHQCREDRDCGSGH 996
C P +G CV C G +GC + C P + CE C C +G
Sbjct: 1193 CHPA----LGTCV--------CAAGYH--GSGCRQRCPPGRFGPGCEQPC----GCLNGG 1234
Query: 997 QCVRKGCGHVCAPVHQVDVGICVTECKVDQDCGE-GRRCAS-NGCGR-----------VC 1137
C +C G +C + G G CA GCG+ C
Sbjct: 1235 SCDAATGACLC------PAGFLGADCSLSCPQGHFGPGCAHVCGCGQAVTCDPVTGSCAC 1288
Query: 1138 SPAQQREACEHQC*EDKDCGSGHQCVRKGCGHVCSPIPQVGICVTECNVDQDCGAGRRCT 1317
P CEH C +++ C HVCS G+C D C G T
Sbjct: 1289 PPGTTGTHCEHGCPQNR--------FGVNCEHVCS-CRNGGLCHAS---DGSCSCGLGWT 1336
Query: 1318 SNGCGRVCSPPQGGGLCVNRCRGNWDCGAGEECIRKGCGRVCSPAQEPVVGICVDQCQRH 1497
C + C P G C C C C EP G C
Sbjct: 1337 GPNCEQACPPGHYGAACRLEC----SCQNNGTC-------------EPTTGAC------- 1372
Query: 1498 WECGPRMRCVSTGCGHICSPAQDQVEQRPGKCPVLPKGTIGLCAEFCSGDDSCPSG--QK 1671
CGP C H C P C + G + SG CP+G +
Sbjct: 1373 -RCGPGF--YGQACQHACPPG-----FHGAGCRAACECQHGASCDPVSGQCVCPAGFYGQ 1424
Query: 1672 CCSHGC 1689
C GC
Sbjct: 1425 LCEKGC 1430
Score = 80.9 bits (198), Expect = 4e-15
Identities = 131/568 (23%), Positives = 166/568 (29%), Gaps = 80/568 (14%)
Frame = +1
Query: 139 VDQDCGAGRRCTSNGCGRVCSPIQQREACEHQCREDRDCGGGHQCVRKG----------- 285
V C T C C P + C+H CR C G C R+
Sbjct: 1023 VSGHCTCPEGWTGLACEEECLPGRFGAGCKHSCR----CLNGGDCDRRSGRCLCPAGWTG 1078
Query: 286 --CGHVCAPVHQVDVGICVMECRVDQDCGEGRLC--ISNGCGRVCFPVRRREACEHQC-- 447
C +CA G + C C G C ++ C +C P R CE+ C
Sbjct: 1079 DQCQSLCAE------GTFGVRCEEHCACRRGATCHHVTGAC--LCPPGWRGSRCENACPH 1130
Query: 448 -------REDRDCGSGHQC-------------VRRGCGHVCAPVHQVDVGICVTECRVDQ 567
+ C G C GC C P G C
Sbjct: 1131 GWFGEACAQRCQCPPGAACHHVTGECRCPRGFTGPGCEQACPP------GTFGESCGQKC 1184
Query: 568 DC-GEGRLCI-------------SNGCGRVCFPGR-REGCEHQCREDRDCGSGHQCVRKG 702
C GE + C +GC + C PGR GCE C C +G C
Sbjct: 1185 HCPGENQACHPALGTCVCAAGYHGSGCRQRCPPGRFGPGCEQPC----GCLNGGSCDAAT 1240
Query: 703 CGHVCAPVHQVGICVTECNVDQDCGEGRQCTSNGCGRVCSPVQQEDVGICVTECKVDQDC 882
+C G +C++ C +G GC VC G VT V C
Sbjct: 1241 GACLCP----AGFLGADCSLS--CPQGH--FGPGCAHVCG------CGQAVTCDPVTGSC 1286
Query: 883 GEGRRCTSNGCGRVCSPVQQKEACEHQCR---------EDRDCGSGHQCVRKGCGHVCAP 1035
T C C + CEH C D C G C C P
Sbjct: 1287 ACPPGTTGTHCEHGCPQNRFGVNCEHVCSCRNGGLCHASDGSCSCGLGWTGPNCEQACPP 1346
Query: 1036 VHQVDVGICVTECKVDQDCGEGRRCASNGCGRVCSPAQQREACEHQC*EDK--------- 1188
H C+++ C C C P +AC+H C
Sbjct: 1347 GHYG------AACRLECSCQNNGTCEPTTGACRCGPGFYGQACQHACPPGFHGAGCRAAC 1400
Query: 1189 DCGSGHQC--VRKGC-------GHVCSPIPQVGICVTECNVDQDCGAGRRCTSNGCGRVC 1341
+C G C V C G +C + G C DC G C +C
Sbjct: 1401 ECQHGASCDPVSGQCVCPAGFYGQLCEKGCEPGSFGEGCREHCDCEMGAACDPITGQCLC 1460
Query: 1342 SPPQGGGLCVNRCRGNWDCGAGEEC-IRKGCGRVCSPAQEPVVGICVDQCQRHWECGPRM 1518
P + G C CR ++ G C +R CG A +PV G C
Sbjct: 1461 PPGRTGATCDLDCRPDF---FGPGCALRCSCGG--GAACDPVSGQC-------------- 1501
Query: 1519 RCVSTGCGHICSPAQDQVEQRPGKCPVL 1602
RCV G C QV +P P L
Sbjct: 1502 RCVDGYMGPTC----QQVASQPAHGPAL 1525
Score = 80.1 bits (196), Expect = 7e-15
Identities = 133/538 (24%), Positives = 171/538 (31%), Gaps = 30/538 (5%)
Frame = +1
Query: 181 GCGRVCSPIQQRE-ACEHQCREDRDCGGGHQCVRKGCGHVCAPVHQVDVGICVMECRVDQ 357
GC C QQ AC+ R D C + C CAP G C
Sbjct: 615 GCSEECQCEQQNTLACD---RRDGSCSCKAGFQGERCQDECAP------GFFGPGCLQAC 665
Query: 358 DCGEGRLC--ISNGCGRVCFPVRRREACEHQCREDR---DCGSGHQCVRRGCGHV----- 507
C +G C IS C + C + + C+ +C +C C C V
Sbjct: 666 TCPQGVACDPISGQCEKQCPAGYQGKGCDQECPAGTFGVNCSGSCYCGGAPCNRVTGQCL 725
Query: 508 CAPVHQVDVGICVTECRVDQDCGEGRLCISNGCGRVCFPGRREGCEHQCREDRDCGSGHQ 687
C P D +C D C EGR + GC +C CEH G
Sbjct: 726 CPPGKTGD------DCGAD--CPEGRWGL--GCQEIC-----PACEH----------GAA 760
Query: 688 CVRKGCGHVCAPVHQVGICVTECNVD---QDCGEGRQCTSNGCGRVCSPVQQEDVGICVT 858
C +C P + C C C C ++G +C PV G C
Sbjct: 761 CEPGTGACLCRPGYVGSRCQDTCPAGWFGPGCQMRCSCANDG---LCHPV----TGHC-- 811
Query: 859 ECKVDQDCGEGRRCTSNGCGRVCSPVQQKEACEHQCREDRDCGSGHQCVRKGCGHVCAPV 1038
C G T C R C + C H C C GH C V
Sbjct: 812 ------SCAPG--WTGLSCQRACDGGRWGPDCSHPCT----CSPGHG----SCDAVS--- 852
Query: 1039 HQVDVGICVTEC-----KVDQDCGEGRRCASNGCGRVCSPAQQREACEHQC*EDKDCGSG 1203
G+CV E + +Q C +G GCGR C + AC+H
Sbjct: 853 -----GLCVCEAGYTGPRCEQRCPQGH--FGPGCGRQCQ-CEHGAACDH-------VSGA 897
Query: 1204 HQCVRKGCGHVCSPIPQVGICVTECNVDQDCGAGRRCTSNGCGRVCSPPQGGGLCVNRCR 1383
C G +C G +C DC AG C S +C + G C C
Sbjct: 898 CTCPAGWRGALCERACPAGFFGLDCRGVCDCAAGAPCDSVSGSCLCPAGRQGPRCDQACP 957
Query: 1384 GNWDCGAGEECIRKGCGRVCSPAQEPVVGICVDQCQRHWECGPRMRCVSTG-----CGHI 1548
+ G C + C + +PV G C C W + TG C H
Sbjct: 958 AH---TYGHNC-SQTCSCFNGASCDPVHGQC--HCGPGWMGSTCLEACPTGSYGQNCQHT 1011
Query: 1549 CSPAQDQVEQRPGKC-PV-----LPKGTIGLCAEFCSGDDSCPSGQKCCSHGCGHSCQ 1704
C + Q G C PV P+G GL E + C G+ GC HSC+
Sbjct: 1012 C------LCQHGGTCDPVSGHCTCPEGWTGLACE-----EECLPGR--FGAGCKHSCR 1056
Score = 72.8 bits (177), Expect = 1e-12
Identities = 147/651 (22%), Positives = 199/651 (30%), Gaps = 124/651 (19%)
Frame = +1
Query: 133 CKVDQDCGAGRRCTSNGCGRVCSPIQQREACEHQCREDRDCGG-GHQCVR---------- 279
C+ +C G+ ++GC + R + + C + G G QC R
Sbjct: 247 CEDVDECATGQAQCAHGC------LNTRGSFKCMCHAGYELGADGRQCYRIEMEIVNSCE 300
Query: 280 ---KGCGHVCAPVHQVDVGICVMECRVDQD---------CGEGRLC---ISNGCGRV--- 405
GC H C+ + C +D+D C + C +N G
Sbjct: 301 ANNGGCSHGCSHSSAGPLCTCPRGYELDEDQKTCIDVDDCADSPCCQQVCTNSPGGYECG 360
Query: 406 CFPVRRREACEHQCREDRDCGSGHQCVRRGCGHVCAPVHQVDVGICVTECRVDQDCGEGR 585
C+ R C + +C SG R GC H CA + C R+D+D R
Sbjct: 361 CYAGYRLSTDGCGCEDVDECASG----RGGCEHHCANLAGSFQCSCEAGFRLDED---RR 413
Query: 586 LCISNGCGRVCFPGR-------------REGCEHQCREDRDCGSGHQCVRKGCGH----- 711
C+ V G+ ++ H ++D + + G
Sbjct: 414 GCVPLEIPEVDLDGQLPVVRPLPHVAMLQDDLPHLFQDDYIGAQEEEEAAEARGEHTLME 473
Query: 712 --VCAPVHQVGICVTECNVDQDCGEGRQCTS--NGC-------GRVCSPVQQEDVGICVT 858
VC C C+ DC G C +GC G +C+ D
Sbjct: 474 KFVCLDASFGQDCSLTCD---DCRNGGACLPGLDGCDCPEGWTGLICNETCPPDT--FGK 528
Query: 859 ECKVDQDCGEGRRCTSNGCGRVCSPVQQKEACEHQCRED---RDCGSGHQCVRKGCGHVC 1029
C + C G C C P CE C + + C C +G H
Sbjct: 529 NCSLSCGCQNGGTCDPVTGACRCPPGVGGTRCEDGCPKGFYGKQCHKKCHCANRGRCHRL 588
Query: 1030 APVHQVDVGI-----------------CVTECKVDQD-----------CG-----EGRRC 1110
D G+ C EC+ +Q C +G RC
Sbjct: 589 YGACLCDPGLYGRFCHLACPPWAFGPGCSEECQCEQQNTLACDRRDGSCSCKAGFQGERC 648
Query: 1111 ASN--------GCGRVCSPAQQREACEH---QC*EDKDCGSGHQCVRKGCGHVCSPIPQV 1257
GC + C+ Q AC+ QC +K C +G+Q KGC C P
Sbjct: 649 QDECAPGFFGPGCLQACT-CPQGVACDPISGQC--EKQCPAGYQ--GKGCDQEC-PAGTF 702
Query: 1258 GICVTECNVDQDCGAGRRCTSNGCGRV-----CSPPQGGGLCVNRC-RGNWDCGAGEECI 1419
G+ +C C C RV C P + G C C G W G E C
Sbjct: 703 GV---------NCSGSCYCGGAPCNRVTGQCLCPPGKTGDDCGADCPEGRWGLGCQEICP 753
Query: 1420 RKGCGRVCSPAQEP-------VVGICVDQCQRHWECGP--RMRCVSTGCGHICSPAQDQV 1572
G C P V C D C W GP +MRC G +C P
Sbjct: 754 ACEHGAACEPGTGACLCRPGYVGSRCQDTCPAGW-FGPGCQMRCSCANDG-LCHPVT--- 808
Query: 1573 EQRPGKCPVLPKGTIGLCAEFCSGDDSCPSGQKCCSHGC----GHSCQTAV 1713
G C P T C C G P CSH C GH AV
Sbjct: 809 ----GHCSCAPGWTGLSCQRACDGGRWGPD----CSHPCTCSPGHGSCDAV 851
>ref|NP_001182078.1| tenascin [Canis lupus familiaris].
Length = 2201
Score = 88.2 bits (217), Expect = 3e-17
Identities = 138/519 (26%), Positives = 180/519 (34%), Gaps = 75/519 (14%)
Frame = +1
Query: 385 SNGCGRVCFPVRRREAC-EHQCREDRDCGSGHQCVRRGCGHVCAPVHQVDVGICVTECR- 558
+ GCG VC P + C E +C +C QC+ C VC D G +C
Sbjct: 169 TEGCGCVCEPGWKGPNCSEPEC--PGNCHLRGQCLDGQC--VC------DEGFTGEDCSQ 218
Query: 559 --VDQDCGEGRLCISNGCGRVCFPGRR------EGCEHQCRED-----------RDCGSG 681
DC + C+S C VCF G E C C E+ +D +G
Sbjct: 219 LACPSDCNDQGKCVSGVC--VCFEGYTGADCGDEVCPVPCNEEHGRCVEGRCVCQDGFAG 276
Query: 682 HQCVRKGCGHVCAPVHQVGICV-TECNVDQDCGEGRQCTSNGCGRVCSPVQQEDVGICVT 858
C C + C H G CV EC C EG T C + P D G CV
Sbjct: 277 EDCSEPLCLNSC---HNRGRCVENECV----CDEG--FTGEDCSELICPNDCFDRGRCVN 327
Query: 859 -ECKVDQ-----DCGE--------GR-RCTSNGCGRVCSPVQQKEAC-EHQCREDRDCGS 990
C +Q DCG+ GR RC C VC P C + C DC
Sbjct: 328 GTCYCEQGFSGEDCGQLSCPNACTGRGRCEQGQC--VCEPGFAGPDCSDRSC--PNDCHH 383
Query: 991 GHQCVRKGCGHVCAPVHQVDVGICVTEC---KVDQDCGEGRRCASNGCGRVCSPAQQREA 1161
+CV C + D G +C + + C C + C VC E
Sbjct: 384 RGRCVHGRC--------ECDAGFGGPDCGQLQCPRGCSGHGHCVNGQC--VCDEGHTGED 433
Query: 1162 C-EHQC*EDKDCGSGHQCVRKGCGHVCSPIPQVGICVTECNVDQDCGAGRRCTSNGCGRV 1338
C + +C DC S +CV+ C VC P Q G ++ + DC RC + C V
Sbjct: 434 CGQLRC--PNDCHSRGRCVQGQC--VCEPGFQ-GYDCSDMSCPNDCHQHGRCVNGMC--V 486
Query: 1339 CSPPQGGGLCVNRCRGNWDCGAGEECIRKGCGRVCSPAQEPVVGICVDQCQRHW------ 1500
C D GE+C C R CS V G C +C+ +
Sbjct: 487 CD----------------DGYTGEDCRDLRCPRDCSDRGRCVAGRC--ECEHGFTGPDCA 528
Query: 1501 ------ECGPRMRCVSTGCGHIC----SPAQDQVEQRPGKCP----------VLPKGTIG 1620
+C + RCV+ C +C + A Q + PG C +G G
Sbjct: 529 DLACPADCHGQGRCVNGQC--VCHEGFTGATCQERRCPGDCQGRGRCEDGRCTCQEGFTG 586
Query: 1621 ------LCAEFCSGDDSCPSGQKCCSHG-CGHSCQTAVP 1716
C CSG C G+ CS G G C P
Sbjct: 587 PDCGQRSCPNGCSGWGQCVEGRCVCSEGHAGEDCSQVSP 625
Score = 84.0 bits (206), Expect = 5e-16
Identities = 129/503 (25%), Positives = 170/503 (33%), Gaps = 60/503 (11%)
Frame = +1
Query: 151 CGAGRRCTSNGCGRVCSPIQQREAC-EHQCREDRDCGG--------------GHQCVRKG 285
C ++ GCG VC P + C E +C + G G C +
Sbjct: 161 CSGRGNFSTEGCGCVCEPGWKGPNCSEPECPGNCHLRGQCLDGQCVCDEGFTGEDCSQLA 220
Query: 286 CGHVCAPVHQVDVGICV-MECRVDQDCG----------------EGR-LCISNGCGRVCF 411
C C + G+CV E DCG EGR +C G C
Sbjct: 221 CPSDCNDQGKCVSGVCVCFEGYTGADCGDEVCPVPCNEEHGRCVEGRCVCQDGFAGEDCS 280
Query: 412 PVRRREACEHQCR-EDRDCGSGHQCVRRGCGHVCAPVHQVDVGICVT-ECRVDQ-----D 570
+C ++ R + +C C + P D G CV C +Q D
Sbjct: 281 EPLCLNSCHNRGRCVENECVCDEGFTGEDCSELICPNDCFDRGRCVNGTCYCEQGFSGED 340
Query: 571 CGEGRLCISNGC-GRVCFPGRREGCEHQCREDRDCGSGHQCVRKGCGHVCAPVHQVGICV 747
CG+ L N C GR GR E + C +G C + C + C H G CV
Sbjct: 341 CGQ--LSCPNACTGR----GRCEQGQCVCEPG---FAGPDCSDRSCPNDC---HHRGRCV 388
Query: 748 -TECNVDQDCGEGRQCTSNGCGRVCSPVQQEDVGICVTECKVDQDCGEGRRCTSNGCGRV 924
C D G G C C R CS G CV C EG T CG++
Sbjct: 389 HGRCECDAGFG-GPDCGQLQCPRGCSGHGHCVNGQCV--------CDEGH--TGEDCGQL 437
Query: 925 CSPVQQKEACEHQCREDRDCGSGHQCVRKGCGHVCAPVHQVDVGICVTECKVDQDCGEGR 1104
P DC S +CV+ C VC P Q G ++ DC +
Sbjct: 438 RCP--------------NDCHSRGRCVQGQC--VCEPGFQ---GYDCSDMSCPNDCHQHG 478
Query: 1105 RCASNGCGRVCSPAQQREAC-EHQC*EDKDCGSGHQCV--RKGCGHVCSPIPQVGICVTE 1275
RC + C VC E C + +C +DC +CV R C H + G +
Sbjct: 479 RCVNGMC--VCDDGYTGEDCRDLRC--PRDCSDRGRCVAGRCECEHGFT-----GPDCAD 529
Query: 1276 CNVDQDCGAGRRCTSNGCGRVCSPPQGGGLCVNR-----CRGNWDCG----------AGE 1410
DC RC + C VC G C R C+G C G
Sbjct: 530 LACPADCHGQGRCVNGQC--VCHEGFTGATCQERRCPGDCQGRGRCEDGRCTCQEGFTGP 587
Query: 1411 ECIRKGCGRVCSPAQEPVVGICV 1479
+C ++ C CS + V G CV
Sbjct: 588 DCGQRSCPNGCSGWGQCVEGRCV 610
Score = 66.2 bits (160), Expect = 1e-10
Identities = 109/408 (26%), Positives = 139/408 (34%), Gaps = 65/408 (15%)
Frame = +1
Query: 115 GICVTECKVDQDCGAGRRCTSNGCGRVCSPIQQREAC-EHQCREDRDCGGGHQCVRKGCG 291
G CV V QD AG C+ C C R C E++C D G + C
Sbjct: 261 GRCVEGRCVCQDGFAGEDCSEPLCLNSC---HNRGRCVENECVCDEGFTG------EDCS 311
Query: 292 HVCAPVHQVDVGICVM-ECRVDQ-----DCGEGRLCISNGC---GR------VCFPVRRR 426
+ P D G CV C +Q DCG+ L N C GR VC P
Sbjct: 312 ELICPNDCFDRGRCVNGTCYCEQGFSGEDCGQ--LSCPNACTGRGRCEQGQCVCEPGFAG 369
Query: 427 EAC-EHQCREDRDCGSGHQCVRRGCGHVCAPVHQVDVGICVTEC---RVDQDCGEGRLCI 594
C + C DC +CV C + D G +C + + C C+
Sbjct: 370 PDCSDRSC--PNDCHHRGRCVHGRC--------ECDAGFGGPDCGQLQCPRGCSGHGHCV 419
Query: 595 SNGCGRVCFPGRREGCEHQCREDRDCGSGHQCVRKGC-------GHVCAPV------HQV 735
+ C VC G Q R DC S +CV+ C G+ C+ + HQ
Sbjct: 420 NGQC--VCDEGHTGEDCGQLRCPNDCHSRGRCVQGQCVCEPGFQGYDCSDMSCPNDCHQH 477
Query: 736 GICVTECNVDQDCGEGRQCTSNGCGRVCSPVQQEDVGICVT---ECK------------V 870
G CV V D G C C R CS D G CV EC+
Sbjct: 478 GRCVNGMCVCDDGYTGEDCRDLRCPRDCS-----DRGRCVAGRCECEHGFTGPDCADLAC 532
Query: 871 DQDCGEGRRCTSNGC-------GRVCSPVQQKEACEHQCR-----EDRDCG-----SGHQ 999
DC RC + C G C Q+ C C+ ED C +G
Sbjct: 533 PADCHGQGRCVNGQCVCHEGFTGATC----QERRCPGDCQGRGRCEDGRCTCQEGFTGPD 588
Query: 1000 CVRKGCGHVCAPVHQVDVGICVTECKVDQDCGEGRRCASNGCGRVCSP 1143
C ++ C + C+ Q G CV C EG A C +V P
Sbjct: 589 CGQRSCPNGCSGWGQCVEGRCV--------CSEGH--AGEDCSQVSPP 626
Score = 54.3 bits (129), Expect = 4e-07
Identities = 80/324 (24%), Positives = 105/324 (32%), Gaps = 14/324 (4%)
Frame = +1
Query: 772 CGEGRQCTSNGCGRVCSPVQQE---DVGICVTECKVDQDCGEGRR-CTSNGCGRVCSPVQ 939
C ++ GCG VC P + C C + C +G+ C G CS +
Sbjct: 161 CSGRGNFSTEGCGCVCEPGWKGPNCSEPECPGNCHLRGQCLDGQCVCDEGFTGEDCSQL- 219
Query: 940 QKEACEHQCREDRDCGSGHQCVRKG-----CGHVCAPVH-QVDVGICVTECKVDQDCGEG 1101
AC C + C SG +G CG PV + G CV V QD G
Sbjct: 220 ---ACPSDCNDQGKCVSGVCVCFEGYTGADCGDEVCPVPCNEEHGRCVEGRCVCQDGFAG 276
Query: 1102 RRCASNGCGRVCSPAQQREAC-EHQC*EDKDCGSGHQCVRKGCGHVCSPIPQVGICVTEC 1278
C+ C C R C E++C D+ +G C C + C G CV
Sbjct: 277 EDCSEPLCLNSC---HNRGRCVENECVCDEGF-TGEDCSELICPNDCF---DRGRCV--- 326
Query: 1279 NVDQDCGAGRRCTSNGCGRVCSPPQGGGLCVNRCRGNWDCGAGEECIRKG-CGRVCSPAQ 1455
+ C + + CG++ C N C G C G+ G G CS
Sbjct: 327 --NGTCYCEQGFSGEDCGQLS--------CPNACTGRGRCEQGQCVCEPGFAGPDCSDRS 376
Query: 1456 EPVVGICVDQCQRHWEC-GPRMRCVSTGCGHICSPAQDQVEQRPGKCPVLPKGTIGLCAE 1632
C + C C R C + G C Q C
Sbjct: 377 ------CPNDCHHRGRCVHGRCECDAGFGGPDCGQLQ--------------------CPR 410
Query: 1633 FCSGDDSCPSGQKCCSHG-CGHSC 1701
CSG C +GQ C G G C
Sbjct: 411 GCSGHGHCVNGQCVCDEGHTGEDC 434
>ref|XP_538245.2| PREDICTED: similar to Low-density lipoprotein receptor-related
protein 1 precursor (LRP) (Alpha-2-macroglobulin
receptor) (A2MR) (Apolipoprotein E receptor) (APOER)
(CD91) [Canis familiaris].
Length = 4526
Score = 83.2 bits (204), Expect = 9e-16
Identities = 136/571 (23%), Positives = 193/571 (33%), Gaps = 76/571 (13%)
Frame = +1
Query: 205 IQQREACEHQCREDRDCGGGHQCVRKGCGHVCAPVHQVDVGICVMECRVDQDCGEGRLCI 384
++Q + H C+ + + G GH CA +G +GR C+
Sbjct: 3266 LRQPDVPNHPCKVNNGGCSNLCLLSPGGGHKCACPTNFYLG------------SDGRTCV 3313
Query: 385 SNGCGRVCFPVRRREACEH--QCREDRDCGSGHQCVRRGCGHV-CAPVH-QVDVGICVTE 552
SN C F + + +C + DCG H C C P Q GIC
Sbjct: 3314 SN-CTASQFVCKNDKCIPFWWKCDTEDDCGD-HSDEPPDCPEFKCRPGQFQCSTGICTNP 3371
Query: 553 ---CRVDQDCGEGRLCISNGCGRVCFPGRREGCEH---------QCREDRDCGSGHQCVR 696
C D DC + +N VC P + + C + +C +CG G
Sbjct: 3372 AFICDGDNDCQDNS-DEANCDIHVCLPSQFK-CTNTNRCIPGIFRCNGQDNCGDGED--E 3427
Query: 697 KGCGHVCAPVHQVGICVTE--------CNVDQDCGEGRQ----CTSNGCGRVCSPVQQED 840
+ C V +Q +T+ C+ D DC +G CT CG + +D
Sbjct: 3428 RDCPEVTCAPNQFQCSITKRCIPRVWVCDRDNDCVDGSDEPANCTQMTCG--VDEFRCKD 3485
Query: 841 VGICVT---ECKVDQDCGEGRRCTSNGCG-RVCSPVQ---QKEAC---EHQCREDRDCGS 990
G C+ +C + DCG+G C R C P Q + C QC D DCG
Sbjct: 3486 SGRCIPARWKCDGEDDCGDGSDEPKEECDERTCEPYQFRCKNNRCVPGRWQCDYDNDCGD 3545
Query: 991 G---HQCVRKGCGHV---CAPVHQVDVGICVT---ECKVDQDCGEGRRCASNGCGRVCSP 1143
C + C CA G C+ +C D DC +G C C
Sbjct: 3546 NSDEESCTPRPCSESEFSCAN------GRCIAGRWKCDGDHDCADGSD--EKDCTPRCDM 3597
Query: 1144 AQQREACEH------QC*EDKDCGSGHQCVRKGCGHVCSPIPQVGICVT-------ECNV 1284
Q + H +C D DC G G G P+ + T +C+
Sbjct: 3598 DQFQCKSGHCIPLRWRCDADADCMDGSDEEACGTGVRTCPLDEFQCNNTLCKPLAWKCDG 3657
Query: 1285 DQDCGAGRRCTSNGCGRVCSPPQGGGLCVN---------RCRGNWDCGAGEECIRKGCGR 1437
+ DCG C R PP C N +C G +CG G +
Sbjct: 3658 EDDCGDNSDENPEECARFVCPPNRPFRCKNDRVCLWIGRQCDGTDNCGDGTD------EE 3711
Query: 1438 VCSP--AQEPVVGICVDQCQRHWECGPRMRCVSTG--CGHI--CSPAQDQVEQRPGKCPV 1599
C P AQ P C D ++ + C RC+S+ C C D+ + C +
Sbjct: 3712 DCEPPTAQTP---HCKD--KKEFLC-RNQRCLSSSLRCNMFDDCGDGSDEED-----CSI 3760
Query: 1600 LPKGT-IGLCAEFCSGDDSCPSGQKCCSHGC 1689
PK T A C + C +K C
Sbjct: 3761 DPKLTSCATNASICGDEARCVRTEKAAYCAC 3791
Score = 61.6 bits (148), Expect = 3e-09
Identities = 103/438 (23%), Positives = 145/438 (33%), Gaps = 52/438 (11%)
Frame = +1
Query: 355 QDCGEGRLCISNG-CGRVCFPVRRREACEHQCREDRDCGSGHQCVRRGCGHVCAPVHQVD 531
Q G + ++NG C +C C C ED+ + +V P Q
Sbjct: 800 QQVGTNKCRVNNGGCSSLCLATPGSRQCA--CAEDQVLDTDGVTCLANPSYVPPPQCQPG 857
Query: 532 VGICVT--------ECRVDQDCGEGRLCISNGCGRVCFPGRREGCEHQ--------CRED 663
C +C D DC + C + P R CE+ C D
Sbjct: 858 EFACANSRCIQERWKCDGDNDCLDNSDEAPALCHQHTCPSDRFKCENNRCIPNRWLCDGD 917
Query: 664 RDCGSGHQCVRKGCGHVCAPVHQV----GICVT---ECNVDQDCGEGRQCTSNGCGRVCS 822
DCG+ C P +Q G C+ C++D DCG+ +++ C
Sbjct: 918 NDCGNSEDESNATCSARTCPPNQFSCASGRCIPISWTCDLDDDCGDRSDESASCAYPTCF 977
Query: 823 PVQQE--DVGICVT---ECKVDQDCGEG---RRCTSNGCGRVCSPVQQKEACEHQCREDR 978
P+ Q + G C+ C ++DCG+G + C R P E QCR D
Sbjct: 978 PLTQFTCNNGRCININWRCDNEKDCGDGSDEKTCPEPAATR---PPGGCHNDEFQCRLD- 1033
Query: 979 DCGSGHQCVRKGCGHVCAPVHQVDVGICVTECKVDQDCGEGR-RCASNGCGRVCSPAQQR 1155
+C P+ C D DC + + G VC P +
Sbjct: 1034 --------------SLCIPLR--------WRCDGDTDCMDSSDEKSCEGVTHVCDP-NVK 1070
Query: 1156 EACEHQC*EDKDCGSGHQCVRKGCGHVCSPIPQVGICVTE---CNVDQDC---GAGRRCT 1317
C KD G +G G + C+++ C+ D DC C
Sbjct: 1071 FGC-------KDSGKKKDGRERGLGQYGQKEIVLTRCISKAWVCDGDSDCEDNSDEENCE 1123
Query: 1318 SNGCGRVCSP-PQGGGLCV---NRCRGNWDCGAG-------EECI--RKGCGRVCSPAQE 1458
S C P +C+ C GN DCG G ++C GC CS A
Sbjct: 1124 SLACRPPSHPCANNTSVCLPLDKLCDGNDDCGDGSDEGELCDQCSLNNGGCSHNCSVA-- 1181
Query: 1459 PVVGICVDQCQRHWECGP 1512
P GI V C E GP
Sbjct: 1182 PGEGI-VCSCPLGMELGP 1198
>ref|XP_547524.2| PREDICTED: similar to MEGF10 protein [Canis familiaris].
Length = 1039
Score = 83.2 bits (204), Expect = 9e-16
Identities = 134/545 (24%), Positives = 169/545 (31%), Gaps = 71/545 (13%)
Frame = +1
Query: 169 CTSNGCGRVCSPIQQREACEHQCREDRDCGGGHQCVRKGCGHVCAPVHQVDVGICVMEC- 345
C G +CS C ++ C G C R C P + D C EC
Sbjct: 249 CPPGWMGTICSLPCPEGFHGPNCSQECRCHNGGLCDRFTGQCRCTPGYTGDR--CQEECP 306
Query: 346 --RVDQDCGEGRLCISNGCGRVCFPVRRREACEHQCREDRDCGSGHQCVRRGCGH----- 504
R QDC E C G CFP CEH +GH+C R C
Sbjct: 307 VGRFGQDCAETCDC---ALGARCFPANGACLCEHGF-------TGHRCAERLCPDGLYGL 356
Query: 505 ------VCAPVHQVDVGICVTECRV-------------DQD-----CGEGRLCISNGCGR 612
C P H + EC QD C E LC+ G
Sbjct: 357 SCQEPCTCDPEHSLSCHPMSGECSCLPGWAGLYCNESCPQDTHGPGCQEHCLCLHGG--- 413
Query: 613 VCFPGRREGCEHQCREDRDCGSGHQCVRKGCGHVCAP-VHQVGICVTECNVDQD------ 771
VC P CR C G+ C +C P + VG C C+ D
Sbjct: 414 VCQPD-----SGLCR----CAPGY--TGPHCASLCPPDTYGVG-CSARCSCDNAIACSPI 461
Query: 772 -----CGEGRQCTSNGCGRVCSPVQQEDVGICVTECKVDQDCGEGRRCTSNGCGRVCSPV 936
C EG Q C CSP G C C C+ C+P
Sbjct: 462 DGACVCKEGWQ--RGNCSVPCSP------GTWGFGCNASCQCAHEAACSPQTGACTCTPG 513
Query: 937 QQKEACEHQCREDRDCGSGHQCV-RKGCGHV--CAPVH---QVDVGICVTECKVDQD--- 1089
C+ C + + G C R C H C PVH Q G T C +
Sbjct: 514 WHGTHCQLPCPKGQ---FGEGCASRCDCDHSDGCDPVHGHCQCQAGWTGTRCHLPCPEGF 570
Query: 1090 ----------CGEGRRCASNGCGRVCSPAQQREACEHQC*EDKDCGSGHQCVRKGCGHVC 1239
C G C VC+P + +C+ C + G +CV C +
Sbjct: 571 WGANCSNTCTCKNGGTCIPENGNCVCTPGFRGPSCQRSCQPGR---YGKRCVPCKCANHS 627
Query: 1240 SPIPQVGICV-----TECNVDQDCGAGRRCTSNGCGRVCSPP---QGGGLCVNRCRGNWD 1395
S P G C T N Q C GR G C+ P + GG C + G+
Sbjct: 628 SCNPSDGTCYCLPGWTGTNCSQSCPRGR------WGANCAQPCLCRHGGTCHPQ-HGSCS 680
Query: 1396 CGAGEECIRKGCGRVCSPAQEPVVGICVDQCQRHWECGPRMRCVSTGCGHICSPAQDQVE 1575
C G G +C P G+ C + +CGP RC +C P
Sbjct: 681 CPPG------WTGHLCLEGCSP--GMFGANCSQLCQCGPGERCHPETGACLCPPGYSGAP 732
Query: 1576 QRPGK 1590
R G+
Sbjct: 733 CRIGE 737
Score = 63.2 bits (152), Expect = 9e-10
Identities = 126/496 (25%), Positives = 157/496 (31%), Gaps = 101/496 (20%)
Frame = +1
Query: 535 GICVTECRVDQDCGEGRLCISNGCGRVCFPG-RREGCEH---------QCREDRDCGSGH 684
G CV C Q+C GR N C C G R + C QC + CG+
Sbjct: 98 GTCVPLCA--QECVHGRCVAPNRCQ--CAQGWRGDDCSSACAPGMWGPQCDKPCHCGNSS 153
Query: 685 QCVRKGCGHVCAPVHQVGICVTECNVDQ---DCGEGRQCTSNGC----GRVCSPVQQEDV 843
C K +C Q C+ C+ Q C QC C G P+++
Sbjct: 154 SCDPKSGACLCPSGLQPPHCLQPCHPGQYGPACQLRCQCHGAPCDPQTGACFCPLERTGP 213
Query: 844 GICVT--------ECKVDQDCGEGR---------RCTSNGCGRVCSPVQQKEACEHQCRE 972
V C C G C G +CS + C +
Sbjct: 214 SCEVACLRDTRGFSCPSTYPCHNGGVFQASQGSCSCPPGWMGTICSLPCPEGFHGPNCSQ 273
Query: 973 DRDCGSGHQCVRKGCGHVCAPVHQVDVGICVTECKV---DQDCGEGRRCASNGCGRVCSP 1143
+ C +G C R C P + D C EC V QDC E CA G C P
Sbjct: 274 ECRCHNGGLCDRFTGQCRCTPGYTGD--RCQEECPVGRFGQDCAETCDCA---LGARCFP 328
Query: 1144 AQQREACEHQC*EDKDCGSGHQCVRK---------GCGHVCSPIPQVGICVTECNVDQDC 1296
A CEH +GH+C + C C+ P+ + + + C
Sbjct: 329 ANGACLCEHGF-------TGHRCAERLCPDGLYGLSCQEPCTCDPEHSLSCHPMSGECSC 381
Query: 1297 ---GAGRRCTSN--------GC--------GRVCSPPQGGGLCVNRCRGNWDCGAGEECI 1419
AG C + GC G VC P GLC RC + G C
Sbjct: 382 LPGWAGLYCNESCPQDTHGPGCQEHCLCLHGGVCQP--DSGLC--RCAPGY---TGPHCA 434
Query: 1420 R--------KGCGRVCS----PAQEPVVGICVDQCQRHWE-------CGP---RMRC-VS 1530
GC CS A P+ G CV C+ W+ C P C S
Sbjct: 435 SLCPPDTYGVGCSARCSCDNAIACSPIDGACV--CKEGWQRGNCSVPCSPGTWGFGCNAS 492
Query: 1531 TGCGH--ICSPAQDQVEQRPG----KCPV-LPKGTIGL-CAEFCSGD--DSCP--SGQKC 1674
C H CSP PG C + PKG G CA C D D C G
Sbjct: 493 CQCAHEAACSPQTGACTCTPGWHGTHCQLPCPKGQFGEGCASRCDCDHSDGCDPVHGHCQ 552
Query: 1675 CSHG-CGHSCQTAVPD 1719
C G G C P+
Sbjct: 553 CQAGWTGTRCHLPCPE 568
Score = 60.5 bits (145), Expect = 6e-09
Identities = 104/441 (23%), Positives = 128/441 (29%), Gaps = 25/441 (5%)
Frame = +1
Query: 121 CVTECKVDQDCGAGRRCTSNGCGRVCSPIQQREACEHQCREDRDCGGGHQCVRKGCGHVC 300
C C D + S C C P C C +D G + G VC
Sbjct: 358 CQEPCTCDPEHSLSCHPMSGECS--CLPGWAGLYCNESCPQDTHGPGCQEHCLCLHGGVC 415
Query: 301 APVHQVDVGICVMECRVDQDCGEGRLCISNGCGRVCFPVRRREACEHQCREDRD------ 462
P D G+C C G C +C P C +C D
Sbjct: 416 QP----DSGLC--------RCAPGYT--GPHCASLCPPDTYGVGCSARCSCDNAIACSPI 461
Query: 463 -----CGSGHQCVRRGCGHVCAPVHQVDVGICVTECRVDQDCGEGRLCISNGCGRVCFPG 627
C G Q R C C+P G C C C C PG
Sbjct: 462 DGACVCKEGWQ--RGNCSVPCSP------GTWGFGCNASCQCAHEAACSPQTGACTCTPG 513
Query: 628 -RREGCEHQCREDRDCGSGHQCV-RKGCGHV--CAPVHQVGICVTECNVDQDCGEGRQCT 795
C+ C + + G C R C H C PVH G C QC
Sbjct: 514 WHGTHCQLPCPKGQ---FGEGCASRCDCDHSDGCDPVH--GHC--------------QCQ 554
Query: 796 SNGCGRVCSPVQQEDVGICVTECKVDQDCGEGRRCTSNGCGRVCSPVQQKEACEHQCRED 975
+ G C E G C C G C VC+P + +C+ C+
Sbjct: 555 AGWTGTRCHLPCPE--GFWGANCSNTCTCKNGGTCIPENGNCVCTPGFRGPSCQRSCQPG 612
Query: 976 RDCGSGHQCVRKGCGH--VCAPVHQVDVGICV-----TECKVDQDCGEGRRCASNGCGRV 1134
R G +CV C + C P G C T Q C GR A+ C +
Sbjct: 613 R---YGKRCVPCKCANHSSCNPSD----GTCYCLPGWTGTNCSQSCPRGRWGAN--CAQP 663
Query: 1135 CSPAQQREACEHQC*EDKDCGSGH---QCVRKGCGHVCSPIPQVGICVTECNVDQDCGAG 1305
C C H C H C GH+C G+ C+ CG G
Sbjct: 664 C-------LCRH----GGTCHPQHGSCSCPPGWTGHLCLEGCSPGMFGANCSQLCQCGPG 712
Query: 1306 RRCTSNGCGRVCSPPQGGGLC 1368
RC +C P G C
Sbjct: 713 ERCHPETGACLCPPGYSGAPC 733
Score = 52.4 bits (124), Expect = 2e-06
Identities = 88/346 (25%), Positives = 112/346 (32%), Gaps = 56/346 (16%)
Frame = +1
Query: 835 EDVGICVTECKVDQDCGEGR-----RCT------SNGCGRVCSPVQQKEACEHQCREDRD 981
E G CV C Q+C GR RC + C C+P C+ C
Sbjct: 95 ESRGTCVPLCA--QECVHGRCVAPNRCQCAQGWRGDDCSSACAPGMWGPQCDKPCH---- 148
Query: 982 CGSGHQCVRKGCGHVCA----------PVHQVDVGICVTECKVDQDCGEGRRCASNGCGR 1131
CG+ C K +C P H G C++ C G C
Sbjct: 149 CGNSSSCDPKSGACLCPSGLQPPHCLQPCHPGQYG---PACQLRCQC-HGAPCDPQTGAC 204
Query: 1132 VCSPAQQREACEHQC*EDK---DCGSGHQCVRKGCGHV------CSPIPQVGICVTEC-- 1278
C + +CE C D C S + C G C P IC C
Sbjct: 205 FCPLERTGPSCEVACLRDTRGFSCPSTYPCHNGGVFQASQGSCSCPPGWMGTICSLPCPE 264
Query: 1279 -----NVDQDCGAGRRCTSNG-CGRV-----CSPPQGGGLCVNRC---RGNWDCGAGEEC 1416
N Q+C RC + G C R C+P G C C R DC +C
Sbjct: 265 GFHGPNCSQEC----RCHNGGLCDRFTGQCRCTPGYTGDRCQEECPVGRFGQDCAETCDC 320
Query: 1417 IRKGCGRVCSPAQEPVVGICVDQCQRHW---ECGPRM---RCVSTGCGHICS-PAQDQVE 1575
G C PA G C+ C+ + C R+ C C+ + +
Sbjct: 321 ---ALGARCFPAN----GACL--CEHGFTGHRCAERLCPDGLYGLSCQEPCTCDPEHSLS 371
Query: 1576 QRP--GKCPVLPKGTIGL-CAEFCSGDDSCPSGQKCCSHGCGHSCQ 1704
P G+C LP G GL C E C D P Q+ C G CQ
Sbjct: 372 CHPMSGECSCLP-GWAGLYCNESCPQDTHGPGCQEHCLCLHGGVCQ 416
>ref|XP_535946.2| PREDICTED: similar to Low-density lipoprotein receptor-related
protein 2 precursor (Megalin) (Glycoprotein 330) (gp330)
[Canis familiaris].
Length = 4646
Score = 80.9 bits (198), Expect = 4e-15
Identities = 125/541 (23%), Positives = 178/541 (32%), Gaps = 86/541 (15%)
Frame = +1
Query: 325 GICVMECRVDQDCGEGRLCISNGCGRVCFPVRRREACEHQCREDRD---CGSGHQCVRRG 495
GI V+ Q C + GC +C P C QC + + C+
Sbjct: 2635 GIRVVVKNQQQQCSNPCSEFNGGCSHICAPGPNGAEC--QCPHEGHWYLANNKKHCIVDN 2692
Query: 496 CGHVCAPVHQVDVGICVTE---CRVDQDCGEG-----RLCISNGC---GRVCFPGRREGC 642
+ G C+ E C D DCG+G +C + C C GR
Sbjct: 2693 GTRCDSSKFTCLNGHCILEQWKCDNDNDCGDGSDELESVCAFHTCQPTAFTCANGRCVQY 2752
Query: 643 EHQCREDRDCGSGHQ---CVRKGCGHV---------CAPVHQVGICVTECNVDQDCGEGR 786
++C DCG C+ + C C P+ V + C+ D D + +
Sbjct: 2753 HYRCDHYNDCGDNSDEAGCLFRECNATVEFTCSNRRCIPLQFVCNGINNCH-DNDTSDEK 2811
Query: 787 QCTSNGCGRVCSP--VQQEDVGICVTE---CKVDQDCGEGRR-----CTSNGCGRVCSPV 936
C+ R C P V+ + IC+ C D DCG+ C S+ C P
Sbjct: 2812 NCSD----RTCQPGYVKCQTTNICIPHFYLCDEDNDCGDMSDESPVFCASHTCSSDEFPC 2867
Query: 937 QQKEACEHQ--CREDRDC--GSGHQCVRKGCGHVC-APVHQVDVGICVTE---CKVDQDC 1092
C E+ DC GS + C + + D G C+ E C D DC
Sbjct: 2868 TSGRCIPKHWYCDEEGDCPDGSDEPATCEYLEATCLSSEFKCDSGRCIREEWICDGDNDC 2927
Query: 1093 G------EGRRCASNGCGR---VCS----PAQQREACEHQC*EDKDCGSGH----QCVRK 1221
G E C ++ C +C+ P+++ C D DC G+ C R+
Sbjct: 2928 GDMSDEDERHHCGNHNCSSSEFLCANNVPPSRKCIPKSWVCDGDADCTDGYDEHQNCTRR 2987
Query: 1222 GCG---HVCSPIPQVGICVT---ECNVDQDCG---AGRRCTSNGCGRVCSPPQGGGLCVN 1374
C CS G+CV C+ DCG R C+ + C Q GLC+
Sbjct: 2988 SCSGNDFTCSN----GLCVPHSYRCDRRNDCGDYSDERNCSYSTCSENQFTCQ-NGLCIY 3042
Query: 1375 R---CRGNWDCGAGEECIRKGC---GRVCSPAQ-EPVVGICVDQ---CQRHWECGPRMRC 1524
+ C G DC G + + C C P Q + G C+D C +C
Sbjct: 3043 KQDVCDGENDCRDGSDELEHLCHTPETTCPPHQFKCDNGNCIDMAKVCNHLDDCSDNSDE 3102
Query: 1525 VSTGCGHICSPAQDQVEQR------PGKCPVLPKGTIGLCAEFCSGDDSCPSGQKCCSHG 1686
G P +Q C P + C D C CS
Sbjct: 3103 KGCGVNECNDPLLSSCDQNCTDTLTSFYCSCRPGYKLMSDKRSCDDIDECKETPFVCSQM 3162
Query: 1687 C 1689
C
Sbjct: 3163 C 3163
Score = 70.1 bits (170), Expect = 7e-12
Identities = 132/562 (23%), Positives = 185/562 (32%), Gaps = 104/562 (18%)
Frame = +1
Query: 115 GICVTECKVDQDCGAGRRCTSNGCGRVCSPIQQREACEHQCREDRD---CGGGHQCVRKG 285
GI V Q C + GC +C+P C QC + C+
Sbjct: 2635 GIRVVVKNQQQQCSNPCSEFNGGCSHICAPGPNGAEC--QCPHEGHWYLANNKKHCIVDN 2692
Query: 286 CGHVCAPVHQVDVGICVME---CRVDQDCGEG-----RLCISNGCGRVCFPVRRREACE- 438
+ G C++E C D DCG+G +C + C F +
Sbjct: 2693 GTRCDSSKFTCLNGHCILEQWKCDNDNDCGDGSDELESVCAFHTCQPTAFTCANGRCVQY 2752
Query: 439 -HQCREDRDCGSGHQ---CVRRGCGHV---------CAPVHQVDVGICVTECRVDQDCGE 579
++C DCG C+ R C C P+ V GI C D D +
Sbjct: 2753 HYRCDHYNDCGDNSDEAGCLFRECNATVEFTCSNRRCIPLQFVCNGI--NNCH-DNDTSD 2809
Query: 580 GRLCISNGCGRVCFPGRREGCE---------HQCREDRDCGSGHQCVRKGC-GHVCAPVH 729
+ C R C PG + C+ + C ED DCG C H C+
Sbjct: 2810 EKNC----SDRTCQPGYVK-CQTTNICIPHFYLCDEDNDCGDMSDESPVFCASHTCSSDE 2864
Query: 730 ---QVGICVTE---CNVDQDCGEG--RQCTSNGCGRVC-SPVQQEDVGICVTE---CKVD 873
G C+ + C+ + DC +G T C S + D G C+ E C D
Sbjct: 2865 FPCTSGRCIPKHWYCDEEGDCPDGSDEPATCEYLEATCLSSEFKCDSGRCIREEWICDGD 2924
Query: 874 QDCG------EGRRCTSNGCGR---VCS----PVQQKEACEHQCREDRDCGSGH----QC 1002
DCG E C ++ C +C+ P ++ C D DC G+ C
Sbjct: 2925 NDCGDMSDEDERHHCGNHNCSSSEFLCANNVPPSRKCIPKSWVCDGDADCTDGYDEHQNC 2984
Query: 1003 VRKGCG---HVCAPVHQVDVGICVT---ECKVDQDCG---EGRRCASNGCGRVCSPAQQR 1155
R+ C C+ G+CV C DCG + R C+ + C Q
Sbjct: 2985 TRRSCSGNDFTCSN------GLCVPHSYRCDRRNDCGDYSDERNCSYSTCSENQFTCQNG 3038
Query: 1156 EACEHQ--C*EDKDCGSG-----HQC---------------------VRKGCGHV--CSP 1245
Q C + DC G H C + K C H+ CS
Sbjct: 3039 LCIYKQDVCDGENDCRDGSDELEHLCHTPETTCPPHQFKCDNGNCIDMAKVCNHLDDCSD 3098
Query: 1246 -IPQVGICVTECNVDQDCGAGRRCTSNGCGRVCSPPQGGGLCVNRCRGNWDCGAGEECIR 1422
+ G V ECN + CT CS G L ++ C +EC
Sbjct: 3099 NSDEKGCGVNECNDPLLSSCDQNCTDTLTSFYCSCRPGYKLMSDK----RSCDDIDEC-- 3152
Query: 1423 KGCGRVCSPAQEPVVGICVDQC 1488
K VCS E V+G + +C
Sbjct: 3153 KETPFVCSQMCENVMGSYICKC 3174
Score = 66.6 bits (161), Expect = 8e-11
Identities = 113/467 (24%), Positives = 154/467 (32%), Gaps = 73/467 (15%)
Frame = +1
Query: 535 GICVTECRVDQDCGEGRLCISNGCGRVCFPGRREGCEHQCREDRDCGSGHQCV---RKGC 705
GI V Q C + GC +C PG G E QC + GH + +K C
Sbjct: 2635 GIRVVVKNQQQQCSNPCSEFNGGCSHICAPG-PNGAECQCPHE-----GHWYLANNKKHC 2688
Query: 706 ----GHVCAPVHQV---GICVTE---CNVDQDCGEGRQCTSNGCG-RVCSPVQQEDV-GI 849
G C G C+ E C+ D DCG+G + C C P G
Sbjct: 2689 IVDNGTRCDSSKFTCLNGHCILEQWKCDNDNDCGDGSDELESVCAFHTCQPTAFTCANGR 2748
Query: 850 CVT---ECKVDQDCGEG---RRCTSNGCGRVCSPVQQKEAC---EHQCREDRDCGSGHQC 1002
CV C DCG+ C C C + C +C
Sbjct: 2749 CVQYHYRCDHYNDCGDNSDEAGCLFRECNATVEFTCSNRRCIPLQFVCNGINNCHDNDTS 2808
Query: 1003 VRKGCG-HVCAP--VHQVDVGICVTE---CKVDQDCGEGRR-----CASNGCGRVCSPAQ 1149
K C C P V IC+ C D DCG+ CAS+ C P
Sbjct: 2809 DEKNCSDRTCQPGYVKCQTTNICIPHFYLCDEDNDCGDMSDESPVFCASHTCSSDEFPCT 2868
Query: 1150 QREACEHQ--C*EDKDC--GSGHQCVRKGCGHVCSPIP---QVGICVTE---CNVDQDCG 1299
C E+ DC GS + C G C+ E C+ D DCG
Sbjct: 2869 SGRCIPKHWYCDEEGDCPDGSDEPATCEYLEATCLSSEFKCDSGRCIREEWICDGDNDCG 2928
Query: 1300 ------AGRRCTSNGCGR---VCS---PPQGGGLCVNR---CRGNWDCGAG----EECIR 1422
C ++ C +C+ PP C+ + C G+ DC G + C R
Sbjct: 2929 DMSDEDERHHCGNHNCSSSEFLCANNVPP--SRKCIPKSWVCDGDADCTDGYDEHQNCTR 2986
Query: 1423 KGCGR---VCSPAQEPVVGICVD---QCQRHWECG---PRMRCVSTGCGHICSPAQDQVE 1575
+ C CS G+CV +C R +CG C + C +++Q
Sbjct: 2987 RSCSGNDFTCSN------GLCVPHSYRCDRRNDCGDYSDERNCSYSTC------SENQFT 3034
Query: 1576 QRPGKCPVLPKGTIGLCAEFCSGDDSCPSGQKCCSHGCGHSCQTAVP 1716
+ G C + C G++ C G H C H+ +T P
Sbjct: 3035 CQNGLCIYK--------QDVCDGENDCRDGSDELEHLC-HTPETTCP 3072
Score = 63.5 bits (153), Expect = 7e-10
Identities = 134/591 (22%), Positives = 185/591 (31%), Gaps = 109/591 (18%)
Frame = +1
Query: 109 DVGICVTECKVDQDCGAGRRCTSNGCGRVCSPIQQREACEHQCREDRDCGGGHQ----CV 276
D+ IC+ C Q A C PI + C RDC G C
Sbjct: 3500 DMNICLPRCSSTQFLCAN--------SEKCIPIWWK------CDGQRDCSDGSDEPVLCP 3545
Query: 277 RKGCGHVCAPVHQVDVGICVME---CRVDQDCGEGR-----LCISNGC--------GRVC 408
++ C Q G C C QDC +G LC + C + C
Sbjct: 3546 QRYCR---LGQFQCKDGNCTSSHFLCNAHQDCPDGSDEDQILCEHHRCESNEWQCANKRC 3602
Query: 409 FPVRRREACEHQCREDRDCGSGHQCVRRGC--GHV-CAPVHQVDVGICVTE---CRVDQD 570
P R E+ C ++ D + C R C G+ CA H C+ + C VD D
Sbjct: 3603 IPEAWRCDSENDCGDNSD-EDVYNCASRICQPGYFKCANNH------CIPQDWKCDVDND 3655
Query: 571 CGEGR-----LCISNGCGR-----------------VC--FPGRREGCEHQCREDRDCGS 678
CG+ C+S+ C VC F R+ + Q E+R C
Sbjct: 3656 CGDYSDEPMPECMSHRCDNHTEFSCRTNYRCIPQWSVCNGFDDCRDNSDEQGCEERTCKP 3715
Query: 679 GHQCVRKGCGHVCAPVHQVGICVTECNVDQDCGEGRQCTSNGCGRVCSPVQQE-DVGICV 855
+ + H C P+ C+ DCG+ N R CS + D C+
Sbjct: 3716 SGEF--RCNNHRCIPLRW------RCDGHNDCGDHSD-EENCVPRECSESEFRCDDQSCI 3766
Query: 856 TE---CKVDQDCGEG---RRCTSNGCGRVCSPVQQKEACEHQCREDRDCGSGHQCVRKGC 1017
C DCG+ R C + C P + H E C C+
Sbjct: 3767 PSRWVCDHTNDCGDNSDERDCEM----KTCQPGYFQCQSGHCVSEQVKCDGTADCLDASD 3822
Query: 1018 GHVC-----------APVHQVDVGICVT---ECKVDQDCGEGRRCASNGCGRVCSPAQQR 1155
C A + + +CV +C D DCG+G + C V + R
Sbjct: 3823 EATCPTRFPNGAYCSATMFECKNHVCVRSSWKCDGDDDCGDGSDEELHLCLDVSCESPNR 3882
Query: 1156 EACEHQ--------C*EDKDCGSGHQCVRKGC-----------------GH------VCS 1242
C++ C DCG G + C GH VC
Sbjct: 3883 FRCDNNRCIYKHELCNHVDDCGDGSDEKEEQCLASTSRPCTENEFKCSNGHCISQNLVCD 3942
Query: 1243 PIPQVG--ICVTECNVDQDCGAGRRCTSNGCGRVCSPPQGGGLCVNRCRGNWDCGAGEEC 1416
+ G T CN G R C N C + C+ GG + CR + +
Sbjct: 3943 DVDDCGDHFDETGCNT----GKERSCAENLCEQNCTQLNEGGF-ICSCRPGFKASILD-- 3995
Query: 1417 IRKGCGRVCSPAQEPVVGICVDQCQR-----HWECGPRMRCVSTGCGHICS 1554
R C + Q G+C CQ C R VS G C+
Sbjct: 3996 -RNSCDDINECEQ---FGVCPQNCQNTKGSYECSCAEGFRSVSDQYGKRCA 4042
Score = 50.1 bits (118), Expect = 8e-06
Identities = 81/340 (23%), Positives = 111/340 (32%), Gaps = 51/340 (15%)
Frame = +1
Query: 130 ECKVDQDCGAGRRCTSNGCGRVCSPIQQREAC--------EHQCREDRDCGGGHQCVRKG 285
EC ++DC G + GR CS Q+ C E++C RDC G K
Sbjct: 86 ECDGERDCEDGSDEHQHCPGRTCS--SQQITCSDGECIPNEYRCDRVRDCSDGTD--EKD 141
Query: 286 CGHVCAPVHQVDVGICV---MECRVDQDCGEGRLCISNGCGRVC----------FPVRRR 426
C + G C +C DC + N C +VC + R
Sbjct: 142 CHYPTCEQLTCANGACYNSSQKCDGKVDCRD--FSDENNCTKVCSHHEFQCDSGVCIPRA 199
Query: 427 EACEH--QCREDRDCGSGHQCVRRGCGHVCAPVHQVDVGICVTE---CRVDQDCGEGRLC 591
C+H C + D S RG CA G C+++ C + DC +
Sbjct: 200 YVCDHYLDCEDGSDELSCTYETCRGNQFTCAS------GYCISQNMVCDGENDCQDN--- 250
Query: 592 ISNGCGRVCFPGRREGCEHQCREDRDCGSGH-QCVRKGCGHVCAPVHQVGICVTECNVDQ 768
G GCE +C G C G C P+ V C+
Sbjct: 251 -----------GDENGCESSTHRIHECYPGEWACPESG---KCIPIANV------CDGTL 290
Query: 769 DCGEGRQCTSNGCGRVCSPVQQEDVGIC-VTECK-------------------VDQ---- 876
DC EG ++ GR C DV +C V C+ VDQ
Sbjct: 291 DCPEGEDENNSTKGRYC------DVNLCSVLSCEYQCHMSPSGGMCYCPPGFIVDQNNTH 344
Query: 877 DCGEGRRCTSNGCGRVCSPVQQKEACEHQCREDRDCGSGH 996
+C + C G VC + + HQCR C G+
Sbjct: 345 NCVDFNDCQIWG---VCDQMCEDRIGHHQCR----CAEGY 377
>ref|XP_531893.2| PREDICTED: similar to MEGF10 protein [Canis familiaris].
Length = 1548
Score = 75.1 bits (183), Expect = 2e-13
Identities = 141/607 (23%), Positives = 188/607 (30%), Gaps = 81/607 (13%)
Frame = +1
Query: 133 CKVDQDCGAGRRCTSNGCGRVCSPIQQREACEHQCREDR---DCGGGHQCVRKG-CGHVC 300
C + C G C + CSP E C+ +C C QCV G C HV
Sbjct: 688 CSQECQCHNGGTCDAATGQCHCSPGYTGERCQDECPVGTYGVRCAETCQCVNGGKCYHVS 747
Query: 301 APVHQVDVGICVMECRVDQDCGEGRLCISNGCGRVCFPVRRREACE----HQCRE-DRDC 465
G C+ E + E RLC G C +R C H C +C
Sbjct: 748 --------GSCLCEAGFAGEHCEARLCPEGLYGIKC---DKRCPCHLDNTHSCHPMSGEC 796
Query: 466 GSGHQCVRRGCGHVCAPVHQVDVGICVTECRVDQDCGEGRLCISNGCGRVCFPG-RREGC 642
C C+P G C+ C G C S +C PG + C
Sbjct: 797 ACKPGWSGLYCNETCSP------GFFGEACQQICSCHNGADCDSVTGKCICAPGFKGIDC 850
Query: 643 EHQCREDR---DCGSGHQCVRKGCGHVCAPV----------HQVGICVT--------ECN 759
C + +C S C VC+PV H V ++ CN
Sbjct: 851 SIPCPLETYGINCSSLCGCKNDA---VCSPVDGSCTCKAGWHGVDCSISCPSGTWGFSCN 907
Query: 760 VDQDCGEGRQCTSNGCGRVCSPVQQEDV-------GICVTECKVDQDCGEGRRCTSNGCG 918
+ C G C + C+P + D G C DC C S
Sbjct: 908 LTCQCLHGGACNTQDGTCTCAPGWRGDKCELPCQDGTYGLNCAERCDCSHADGCHSTTGH 967
Query: 919 RVCSPVQQKEACEHQCREDR---DCGSGHQCVRKGCGHVCAPVHQVDVGICVTECKVDQD 1089
C P C+ C E R +C C G C+P D GIC +
Sbjct: 968 CRCLPGWSGVHCDSVCAEGRWGPNCSLPCYCKN---GASCSP----DDGIC--------E 1012
Query: 1090 CGEGRRCASNGCGRVCSPAQQREACEHQC*EDKDCGSGHQCVRKG--CGHV-----CSPI 1248
C G R C R+CSP C C QCV C H+ C P
Sbjct: 1013 CAPGFR--GTTCQRICSPGFYGHRCSQTC---------PQCVHSSGPCHHITGLCDCLPG 1061
Query: 1249 PQVGICVTEC---NVDQDCGAGRRCTSNG-------------------CGRVCSPPQGGG 1362
+C C ++C CT+NG C + C P G
Sbjct: 1062 FTGALCNEVCPSGRFGKNCAGVCTCTNNGTCNPIDRSCQCYPGWIGSDCSQPCPPAHWGP 1121
Query: 1363 LCVNRCRGNWDCGAGEECIRKGCGRVCSPAQEPVVGICVDQCQRHW---ECGPRMRCVS- 1530
C++ C +C G C C+P + C +C + +C +C +
Sbjct: 1122 NCIHTC----NCHNGAFCSAYDGECKCTPGWTGL--YCTQRCPLGFYGKDCALICQCQNG 1175
Query: 1531 TGCGHICSPAQDQVEQRPGKC-PVLPKGTIGL-CAEFCS--GDDSCP--SGQKCCSHGC- 1689
C HI + C P GT G C + C + +C +G CS G
Sbjct: 1176 ADCDHISGQCTCRTGFMGKHCEQKCPAGTYGYGCRQICDCLNNSTCDHITGTCYCSPGWK 1235
Query: 1690 GHSCQTA 1710
G C A
Sbjct: 1236 GARCDQA 1242
Score = 50.4 bits (119), Expect = 6e-06
Identities = 92/347 (26%), Positives = 116/347 (33%), Gaps = 22/347 (6%)
Frame = +1
Query: 817 CSPVQQEDVGICVTECKVDQDCGEGRRCTSNGCGRVCSPVQQKEACEHQCREDR---DCG 987
C P E +CV C C GR N C C P C C D C
Sbjct: 505 CCPGFYESREMCVPHCA--DKCVHGRCIAPNTCQ--CEPGWGGTNCSSACDGDHWGPHCS 560
Query: 988 SGHQCVRKGCGHVCAPVHQVDVGICVTECKVDQDCGEGRRCASNGCGRVCSPAQQREACE 1167
S QC G +C P+ G C CA+ G C ++
Sbjct: 561 SRCQCKN---GALCNPI----TGAC--------------HCAAGFRGWRCEDRCEQGTYG 599
Query: 1168 HQC*EDKDCGSGHQCVRKGCGHVCSPIPQVGICVTECNVDQDCGAGRRCTSNGCGRVCSP 1347
+ C + C +G C HV EC C G T C +C P
Sbjct: 600 NDCHQRCQCQNGATC-----DHVTG----------ECR----CPPGY--TGAFCEDLCPP 638
Query: 1348 PQGGGLCVNRC----RGNWDCGAGE-ECIRKGCGRVC-SPAQEPVVGICVDQCQRHWECG 1509
+ G C RC G GE C G VC P E G C + +C
Sbjct: 639 GKHGPQCEQRCPCQNGGICHHVTGECSCPSGWLGTVCGQPCPEGRFG---KNCSQECQCH 695
Query: 1510 PRMRC-VSTGCGHICSPAQDQVEQRPGKCPVLPKGTIGL-CAEFCSGDDSCPSGQKC--- 1674
C +TG H CSP E+ +CPV GT G+ CAE C C +G KC
Sbjct: 696 NGGTCDAATGQCH-CSPGYTG-ERCQDECPV---GTYGVRCAETC----QCVNGGKCYHV 746
Query: 1675 -----CSHG-CGHSCQTAVPDEKTFPSRLDD**T--LASFHNCSHMS 1791
C G G C+ + E + + D L + H+C MS
Sbjct: 747 SGSCLCEAGFAGEHCEARLCPEGLYGIKCDKRCPCHLDNTHSCHPMS 793
>ref|XP_533538.2| PREDICTED: similar to Very low-density lipoprotein receptor precursor
(VLDL receptor) isoform 1 [Canis familiaris].
Length = 873
Score = 75.1 bits (183), Expect = 2e-13
Identities = 121/464 (26%), Positives = 159/464 (34%), Gaps = 69/464 (14%)
Frame = +1
Query: 238 REDRDCGGGHQCVRKGCGHVCAPVH-QVDVGICVM---ECRVDQDCGEG---RLCISNGC 396
RE R G G + C P Q G C+ +C D+DC +G + C+ C
Sbjct: 20 RESRATGAGRKAK-------CEPSQFQCTNGRCITLLWKCDGDEDCADGSDEKNCVKKTC 72
Query: 397 GRVCFPVRRREACEH--QCREDRDCGSG-----HQCVRRGCGHVCAPVHQVDVGICVTEC 555
F + + QC D DC G QC R C ++++ G T+C
Sbjct: 73 AESDFVCNNGQCVPNRWQCDGDPDCEDGSDENPEQCHMRTC-----RINEISCGARSTQC 127
Query: 556 -----RVD--QDCGEGRLCISNGCGRV--------CFPGRREGCEHQCREDRDCGSGH-- 684
R D DC G CG + C GR C DC G
Sbjct: 128 IPVSWRCDGENDCDSGE--DEENCGNITCSPDEFTCSSGRCISRNFVCNGQDDCSDGSDE 185
Query: 685 -QCVRKGCGH--------VCAPVHQVGICVTECNVDQDCGEGRQCTSNGCGRVCSPVQ-- 831
C CG C P+ V C+ D DC + + CGR PV
Sbjct: 186 LDCAPPTCGEHEFQCSTSSCIPLSWV------CDDDADCSDQSDESLEQCGR--QPVMHT 237
Query: 832 -------QEDVGICVTE---CKVDQDCGEGRRCTSNGCGRVCSPVQ---QKEACEH---Q 963
Q G C+ + C D DC +G N R C P Q + +C H Q
Sbjct: 238 KCPASETQCGSGECIHKKWRCDGDPDCKDGSD-EVNCPSRTCRPDQFECEDGSCIHGSRQ 296
Query: 964 CREDRDCGSGHQCVRKGCGHVCAPVHQVDVGICVTECK-VDQDCGEGR-RCASNGC---G 1128
C RDC G V CK V+Q G G+ +C S C G
Sbjct: 297 CNGIRDCVDGSDEV---------------------NCKNVNQCLGPGKFKCRSGECIDIG 335
Query: 1129 RVCSPAQQREACEHQC*ED-KDCGSGHQCVRK-GCGHVCSPIPQVGICVTECNVDQDCGA 1302
+VC+ Q + C E K+C V GC H+C + + EC DC A
Sbjct: 336 KVCN---QEQDCRDWSDEPLKECHVNECLVNNGGCSHICKDL----VIGYEC----DCAA 384
Query: 1303 GRRCTSNG-CGRVCSPPQGGGLCVNRC---RGNWDCGAGEECIR 1422
G CG + Q G+C C +G + C EC R
Sbjct: 385 GFELIDKKICGDI-DECQNPGICSQICINLKGGYKC----ECSR 423
Score = 59.7 bits (143), Expect = 1e-08
Identities = 85/337 (25%), Positives = 120/337 (35%), Gaps = 72/337 (21%)
Frame = +1
Query: 772 CGEGRQCTSNGCGRV--CSPVQ-QEDVGICVT---ECKVDQDCGEG---RRCTSNGCGR- 921
C R+ + G GR C P Q Q G C+T +C D+DC +G + C C
Sbjct: 16 CWAPRESRATGAGRKAKCEPSQFQCTNGRCITLLWKCDGDEDCADGSDEKNCVKKTCAES 75
Query: 922 --VCSPVQQKEACEHQCREDRDCGSGHQCVRKGCGHVCAPVHQVDVGICVTE-------C 1074
VC+ Q QC D DC G + C ++++ G T+ C
Sbjct: 76 DFVCNNGQCVPN-RWQCDGDPDCEDGSDENPEQCHMRTCRINEISCGARSTQCIPVSWRC 134
Query: 1075 KVDQDCGEGRRCASNGCGRV-CSPAQ---QREAC---EHQC*EDKDCGSGH---QCVRKG 1224
+ DC G CG + CSP + C C DC G C
Sbjct: 135 DGENDCDSGE--DEENCGNITCSPDEFTCSSGRCISRNFVCNGQDDCSDGSDELDCAPPT 192
Query: 1225 CGH--------VCSPIPQVGICVTECNVDQDCGAGRRCTSNGCGR------VCSPPQ--- 1353
CG C P+ V C+ D DC + CGR C +
Sbjct: 193 CGEHEFQCSTSSCIPLSWV------CDDDADCSDQSDESLEQCGRQPVMHTKCPASETQC 246
Query: 1354 GGGLCVN---RCRGNWDCGAGEE---CIRKGC---------------GRVCSPAQEPVVG 1470
G G C++ RC G+ DC G + C + C R C+ ++ V G
Sbjct: 247 GSGECIHKKWRCDGDPDCKDGSDEVNCPSRTCRPDQFECEDGSCIHGSRQCNGIRDCVDG 306
Query: 1471 ICVDQCQRHWEC-GP-RMRCVSTGC---GHICSPAQD 1566
C+ +C GP + +C S C G +C+ QD
Sbjct: 307 SDEVNCKNVNQCLGPGKFKCRSGECIDIGKVCNQEQD 343
>ref|XP_544929.2| PREDICTED: similar to keratin associated protein 10-8 [Canis
familiaris].
Length = 328
Score = 74.3 bits (181), Expect = 4e-13
Identities = 83/335 (24%), Positives = 103/335 (30%), Gaps = 34/335 (10%)
Frame = +1
Query: 652 CREDRDCGSGHQCVRKGCGHVCAPVHQVGICVTECNVDQDCGEGR----QCTSNGCGRVC 819
C D CG G C C + QV C C C CT CG
Sbjct: 20 CSSDLSCG-GRLCSPSAC---TSSSWQVDDCQETCCEPPCCAPASCLTLLCTPASCGS-- 73
Query: 820 SPVQQEDVGICVTECKVDQDCGEGRRCTSNGCGRVCSPVQQKEACEHQCREDRDCGSGHQ 999
SP G C C C EG C + C C PV C C + C S
Sbjct: 74 SPCPPACPGSCQPSCGSCSPCQEG--CGVSVC---CKPV----CCTPVCCKPLCCESSPC 124
Query: 1000 CVRKGCGHVCAPVHQVDVGICVTECKVDQDCGEGRRCASNGCGRVC--------SPAQQR 1155
C + C C G CV+ C C C VC SP Q+
Sbjct: 125 CQQSSCQPSCCNSSPCQEGCCVSVC-----------CKPVCCTPVCCKPLCCESSPCCQQ 173
Query: 1156 EACEHQC*EDKDCGSGHQCVRKGCGHVC-SPIP------QVGICVTECNVDQDCGAGRRC 1314
+C+ C C G CV C VC +P+ + C + + CG+ C
Sbjct: 174 SSCQPSCCNSSPCQEGC-CVSVCCKPVCCTPVCCKPLCCEASPCCQQSSCQPSCGSCSPC 232
Query: 1315 TSNGCGRVCSPP--------QGGGLCVNRCRGNWDCGAGEECIRKGCGRVCSPAQ----- 1455
C VC P + LC + C + C C VC
Sbjct: 233 QEGCCMSVCCKPVCCTPVCCKPSSLCCQQSSCQPSCCSSSPCQEDSCVSVCCKPMCCTPV 292
Query: 1456 --EPVVGICVDQCQRHWECGPRMRCVSTGCGHICS 1554
+PV CV C P+ VS C +CS
Sbjct: 293 CCKPVPACCVPLSPCQPSCCPQASSVSLLCRPMCS 327
Score = 67.4 bits (163), Expect = 5e-11
Identities = 93/376 (24%), Positives = 119/376 (31%), Gaps = 6/376 (1%)
Frame = +1
Query: 235 CREDRDCGGGHQCVRKGCGHVCAPVHQVDVGICVMECRVDQDCGEGRLCISNGCGRVCFP 414
C D CGG C C V C C C LC CG P
Sbjct: 20 CSSDLSCGG-RLCSPSACTSSSWQVDDCQETCCEPPCCAPASCLT-LLCTPASCGSSPCP 77
Query: 415 VRRREACEHQCREDRDCGSGHQCVRRGCGHVCAPVHQVDVGICVTECRVDQDCGEGRLCI 594
AC C+ CGS C + GCG V +C C + C
Sbjct: 78 ----PACPGSCQPS--CGSCSPC-QEGCG----------VSVCCKPVCCTPVCCKPLCCE 120
Query: 595 SNGCGRVCFPGRREGCEHQCREDRDCGSGHQCVRKGCGHVCA-PVHQVGICVTECNVDQD 771
S+ C C ++ C+ C C G CV C VC PV C C
Sbjct: 121 SSPC---C---QQSSCQPSCCNSSPCQEGC-CVSVCCKPVCCTPV----CCKPLCCESSP 169
Query: 772 CGEGRQCTSNGCGRVCSPVQQEDVGICVTECKVDQDCGEGRRCTSNGCGRVC---SPVQQ 942
C + C + C SP Q+ G CV+ C C CT C +C SP Q
Sbjct: 170 CCQQSSCQPSCCNS--SPCQE---GCCVSVC-CKPVC-----CTPVCCKPLCCEASPCCQ 218
Query: 943 KEACEHQCREDRDCGSGHQCVRKGCGHVCA-PVHQVDVGICVTECKVDQDCGEGRRCASN 1119
+ +C+ C C G C+ C VC PV +C + C C +
Sbjct: 219 QSSCQPSCGSCSPCQEGC-CMSVCCKPVCCTPVCCKPSSLCCQQSSCQPSCCSSSPCQED 277
Query: 1120 GCGRVCSPAQQREACEHQC*EDKDCGSGHQCVRKGCGHV-CSPIPQVGICVTECNVDQDC 1296
C VC C+ C C V C P+P + ++ C C
Sbjct: 278 SCVSVC--------CKPMC----------------CTPVCCKPVPACCVPLSPC--QPSC 311
Query: 1297 GAGRRCTSNGCGRVCS 1344
S C +CS
Sbjct: 312 CPQASSVSLLCRPMCS 327
Score = 66.6 bits (161), Expect = 8e-11
Identities = 72/283 (25%), Positives = 91/283 (32%), Gaps = 18/283 (6%)
Frame = +1
Query: 133 CKVDQDCGAGRRCTSNGCGRVCSPIQQREACEHQCREDRDCGGGH----QCVRKGCGHVC 300
C D CG GR C+ + C S Q + C+ C E C C CG
Sbjct: 20 CSSDLSCG-GRLCSPSAC---TSSSWQVDDCQETCCEPPCCAPASCLTLLCTPASCGS-- 73
Query: 301 APVHQVDVGICVMECRVDQDCGEGRLCISNGCGRVCFPVRRREACEHQCREDRDCGSGHQ 480
+P G C C C EG C + C C PV C C + C S
Sbjct: 74 SPCPPACPGSCQPSCGSCSPCQEG--CGVSVC---CKPV----CCTPVCCKPLCCESSPC 124
Query: 481 CVRRGCGHVCAPVHQVDVGICVTECRVDQDCGEGRLCISNGCGRVCFPGRREGCEHQCRE 660
C + C C G CV+ C C +C C ++ C+ C
Sbjct: 125 CQQSSCQPSCCNSSPCQEGCCVSVCCKPVCCTP--VCCKPLCCESSPCCQQSSCQPSCCN 182
Query: 661 DRDCGSGHQCVRKGCGHVC-------------APVHQVGICVTECNVDQDCGEGRQCTSN 801
C G CV C VC +P Q C C C EG C S
Sbjct: 183 SSPCQEGC-CVSVCCKPVCCTPVCCKPLCCEASPCCQQSSCQPSCGSCSPCQEGC-CMSV 240
Query: 802 GCGRVC-SPVQQEDVGICVTECKVDQDCGEGRRCTSNGCGRVC 927
C VC +PV + +C + C C + C VC
Sbjct: 241 CCKPVCCTPVCCKPSSLCCQQSSCQPSCCSSSPCQEDSCVSVC 283
Score = 64.7 bits (156), Expect = 3e-10
Identities = 78/318 (24%), Positives = 96/318 (30%), Gaps = 2/318 (0%)
Frame = +1
Query: 754 CNVDQDCGEGRQCTSNGCGRVCSPVQQEDVGICVTECKVDQDCGEGRRCTSNGCGRVCSP 933
C+ D CG GR C+ + C V C C C CT CG P
Sbjct: 20 CSSDLSCG-GRLCSPSACTSSSWQVDDCQETCCEPPCCAPASCLT-LLCTPASCGSSPCP 77
Query: 934 VQQKEACEHQCREDRDCGSGHQCVRKGCGHVCAPVHQVDVGICVTECKVDQDCGEGRRCA 1113
AC C+ CGS C ++GCG V +C C + C
Sbjct: 78 ----PACPGSCQPS--CGSCSPC-QEGCG----------VSVCCKPVCCTPVCCKPLCCE 120
Query: 1114 SNGCGRVCSPAQQREACEHQC*EDKDCGSGHQCVRKGCGHVCSPIPQVGICVTECNVDQD 1293
S SP Q+ +C+ C C G CV C VC C C
Sbjct: 121 S-------SPCCQQSSCQPSCCNSSPCQEGC-CVSVCCKPVC--------CTPVCCKPLC 164
Query: 1294 CGAGRRCTSNGCGRVC--SPPQGGGLCVNRCRGNWDCGAGEECIRKGCGRVCSPAQEPVV 1467
C + C + C C S P G CV+ C C C VC
Sbjct: 165 CESSPCCQQSSCQPSCCNSSPCQEGCCVSVC-----------CKPVCCTPVCCKPLCCEA 213
Query: 1468 GICVDQCQRHWECGPRMRCVSTGCGHICSPAQDQVEQRPGKCPVLPKGTIGLCAEFCSGD 1647
C Q CG C C +C +P C + LC + S
Sbjct: 214 SPCCQQSSCQPSCGSCSPCQEGCCMSVCC--------KPVCCTPVCCKPSSLCCQQSSCQ 265
Query: 1648 DSCPSGQKCCSHGCGHSC 1701
SC S C C C
Sbjct: 266 PSCCSSSPCQEDSCVSVC 283
>ref|XP_858190.1| PREDICTED: similar to notch 2 preproprotein isoform 2 [Canis
familiaris].
Length = 2381
Score = 73.9 bits (180), Expect = 5e-13
Identities = 138/586 (23%), Positives = 199/586 (33%), Gaps = 48/586 (8%)
Frame = +1
Query: 109 DVGICVTECKVDQDCGAGRRCTSNGC--GRVCSPIQQREACEHQCREDRDCGGGHQCVRK 282
D G C+VD++ C SN C G C + C C++ G Q V
Sbjct: 745 DAGWIGINCEVDKN-----ECLSNPCQNGGTCDNLVNGYRCT--CKKGFK-GKNCQTVLA 796
Query: 283 GCGH-------VCAPVHQVDVGICVMECRVDQDCGEGRLCIS--NGCGRVCFPVRRREAC 435
C VC + C+ C G C+ N +C P + C
Sbjct: 797 PCSPNPCENAAVCKEAPDFESYTCLCAPGWQDPCQNGGSCVDGVNTFSCLCHPGFIGDKC 856
Query: 436 EHQCRE--DRDCGSGHQCVRRGCGHVCAPVHQVDVGIC---VTECRVDQDCGEGRLCIS- 597
+ E C +G C + C D C + EC + C G C+
Sbjct: 857 QTDMNECLSEPCKNGGTCSDYVNSYTCKCQAGFDGVHCENNIDEC-TESSCFNGGTCVDG 915
Query: 598 -NGCGRVCFPG-RREGCEHQCREDRDCGSGHQCVRKGCGHVCAPVHQVGICVTECNVDQD 771
N +C G C H+ E C S H C+ +G +C V +G C +
Sbjct: 916 INSFSCLCPLGFTGPFCLHEINE---CNS-HPCLNEG---IC--VDGLGTYRCTCPLGYT 966
Query: 772 CGEGRQCTSNGCGRVCSPVQQEDVGICVTECKVDQDCGEGRRCTSNGCGRVCSP--VQQK 945
G+ Q N C R SP + + G C+ E K + C C S G C V +
Sbjct: 967 -GKNCQTLVNLCSR--SPCKNK--GTCIQE-KAESRC----LCPSGWAGAYCDVPNVSCE 1016
Query: 946 EACEHQ-CREDRDCGSGHQCVRKGCGHVCAPVHQVDVGICVTECKVDQD------CGEGR 1104
A H+ D C C+ G H C Q +G + C+ D C G
Sbjct: 1017 VAALHRGVSTDHLCQHSGICINAGNSHHC----QCPLGYTGSYCEEQLDECSSNPCQHGA 1072
Query: 1105 RCAS--NGCGRVCSPAQQREACEHQC*E--DKDCGSGHQCVRKGCGHVCSPIPQVGICVT 1272
C G C P Q CE++ E ++ C +G CV CS P +
Sbjct: 1073 TCRDFIGGYRCECVPGYQGVNCEYEVDECQNQPCQNGGTCVDLVNHFKCSCPPGTRGLLC 1132
Query: 1273 ECNVDQDCGAGRRCTSNGCGRVCSPPQGG-------GLCVNRCRGNWDCGAGEECIRKGC 1431
E N+D DC G C + G C GG G RC G+ + EC+ C
Sbjct: 1133 EENID-DCVGGPHCLNGG---QCVDRIGGYSCRCLPGFAGERCEGDIN-----ECLSNPC 1183
Query: 1432 GRV----CSPAQEPVVGICVD-----QCQRHWECGPRMRCVSTGCGHICSPAQDQVEQRP 1584
C + +C C+ + P+M C++ G C+ A + +
Sbjct: 1184 SSEGSLDCIQLTNDYLCVCRSAFTGRHCETFIDVCPQMPCLNGGT---CAVASNMPDGFI 1240
Query: 1585 GKCPVLPKGTIGLCAEFCSGDDSCPSGQKCCSHGCGHSCQTAVPDE 1722
+CP G G + G C G++C G C P +
Sbjct: 1241 CRCP---PGFSGAKCQSSCGQVKCRRGEQCVHTASGPRCFCPNPQD 1283
Score = 68.6 bits (166), Expect = 2e-11
Identities = 141/592 (23%), Positives = 198/592 (33%), Gaps = 57/592 (9%)
Frame = +1
Query: 106 VDVGICVTECKVDQDCGAGRRCTSNGCGRVCSPIQQREACE-HQCREDRDCGGGHQCVRK 282
V+ G+CVT C +C G C Q R+ CE ++C+ C +
Sbjct: 36 VNEGVCVTYHNGTGYC----KCPEGFLGEYC---QHRDPCERNRCQNGGTCVAQAMLGKA 88
Query: 283 GCG---------------HVCAPVHQ-VDVGICVMECRVDQDCGEGRLCISNGCGRVCFP 414
C H C H ++ G C M R D +C C G++C
Sbjct: 89 TCRCALGFTGDDCQYSTTHPCFVSHPCLNGGTCHMHSRDDYEC----TCQVGFTGKLC-- 142
Query: 415 VRRREAC-EHQCREDRDCGS-----GHQCVRRGCGHVCAPVHQVDVGICVTECRVDQDCG 576
+ +AC H C C + +C+ G C I V EC + C
Sbjct: 143 -QWTDACLSHPCANGSTCTTVANQFSCKCLTGFTGQKCE--------IDVNECDIPGQCQ 193
Query: 577 EGRLCISNGCGRVCFPGRREGCEHQCREDRDCGSGH-QCVRKGC--GHVCAPVHQVGICV 747
G C++ PG + Q + C S + C C G C Q G
Sbjct: 194 HGGTCLN-------LPGSYQCQCPQGFTGKHCDSPYVPCAPSPCVNGGTC---RQTGDFT 243
Query: 748 TECNVDQDCGEGRQCTSNGCGRVCSPVQQEDVGICVTECKVDQDCGEGRRCTSNGCGRVC 927
ECN EG C N C + ++ G+CV +C RC G+ C
Sbjct: 244 FECNCLPGF-EGITCERNIDD--CPNHKCQNGGVCVDGVNT-YNC----RCPPQWTGQFC 295
Query: 928 SPVQQKEACEHQCREDRDCGSGHQCVRKGCGHVCAPVHQVDVGICVTECKVDQDCGEG-R 1104
+ E + + C +G C + G+ C +CV D DC E
Sbjct: 296 T-----EDVDECLLQPNACQNGGTCTNRNGGYGC---------VCVNGWSGD-DCSENID 340
Query: 1105 RCASNGC--GRVCSPAQQREACEHQC*EDKD---CGSGHQCVRKGC--GHVCSPIPQVGI 1263
CA C G C +C C E K C C+ C G +C P G
Sbjct: 341 DCAFASCTPGSTCIDRVASFSC--MCPEGKAGLLCHLDDACISNPCHKGALCDTNPLNGQ 398
Query: 1264 CVTECNVDQDCGAGRRCTSN--GCGRVCSPPQGGGLCVNRCRGNWDCGAGEECIRKGCGR 1437
+ C G CT + C +P + G CVN G + C EC++ G
Sbjct: 399 YICTC---PQGFKGADCTEDVDECAMGDNPCEHAGKCVNT-DGAFHC----ECLKGYAGP 450
Query: 1438 VCSPAQEPVVGIC-VDQCQRHWEC-----GPRMRCVSTGCGHICSPAQDQVEQRP----G 1587
C E + C D CQ C G C+ G C ++ + P G
Sbjct: 451 RC----EMDINECHSDPCQNDATCLDKIGGFTCLCMPGFKGVHCELEINECQSNPCVNNG 506
Query: 1588 KCP--------VLPKGTIGLCAEFCSGDDS---CPSGQKCCSHGCGHSCQTA 1710
+C + P G G + D S C +G KC H G+ CQ A
Sbjct: 507 QCVDKVNRFQCLCPPGFTGPVCQIDIDDCSSTPCLNGAKCIDHPNGYECQCA 558
Score = 55.8 bits (133), Expect = 1e-07
Identities = 130/609 (21%), Positives = 182/609 (29%), Gaps = 105/609 (17%)
Frame = +1
Query: 193 VCSPIQQREACEHQCRE--DRDCGGGHQCVRKGCGHVCAPVHQVDVGICVMECRVDQDCG 366
+C+P C Q E C +C+ G+ C G + C ++ D
Sbjct: 593 ICNPGYMGAICSDQIDECYSSPCLNDGRCIDLVNGYQC----NCQPGTSGVNCEINFDDC 648
Query: 367 EGRLCISNGC-------GRVCFPVRRREACEHQCRE--DRDCGSGHQCVRRGCGHVCA-- 513
C+ C VC P + C E C G C+ G C
Sbjct: 649 ASNPCVHGVCMDGINRYSCVCSPGFTGQRCNIDIDECASNPCRKGATCINDVNGFRCLCP 708
Query: 514 -----PVHQVDVGICVTECRVDQDCGEGR-----LCISNGCGRVCFPGRREGCEHQCRED 663
P V C++ + +C G LC + G C + E + C+
Sbjct: 709 EGPHRPSCYSQVNECLSSPCIHGNCTGGPSGYKCLCDAGWIGINCEVDKNECLSNPCQNG 768
Query: 664 RDCGS---GHQCV------RKGCGHVCAPVHQVGICVTECNVDQDCGEGRQCTSNGCGRV 816
C + G++C K C V AP C C E S C +
Sbjct: 769 GTCDNLVNGYRCTCKKGFKGKNCQTVLAPCSP-----NPCENAAVCKEAPDFESYTC--L 821
Query: 817 CSPVQQEDVGICVTECKVDQDCGEGRRCTSNGCGRVCSPVQQKEACEHQCRE--DRDCGS 990
C+P Q+ C+ C +G N +C P + C+ E C +
Sbjct: 822 CAPGWQDP-------CQNGGSCVDG----VNTFSCLCHPGFIGDKCQTDMNECLSEPCKN 870
Query: 991 GHQCVRKGCGHVCAPVHQVDVGIC---VTECKVDQDCGEGRRCAS--NGCGRVCSPAQQR 1155
G C + C D C + EC + C G C N +C
Sbjct: 871 GGTCSDYVNSYTCKCQAGFDGVHCENNIDEC-TESSCFNGGTCVDGINSFSCLCPLGFTG 929
Query: 1156 EACEHQC*EDKDCGSGHQCVRKGC-----------------GHVC---------SPIPQV 1257
C H E +C S H C+ +G G C SP
Sbjct: 930 PFCLH---EINECNS-HPCLNEGICVDGLGTYRCTCPLGYTGKNCQTLVNLCSRSPCKNK 985
Query: 1258 GICVTECNVDQDCGAGRRCTSNGCGRVCSPP-------------------QGGGLCVNRC 1380
G C+ E + C C S G C P Q G+C+N
Sbjct: 986 GTCIQE-KAESRC----LCPSGWAGAYCDVPNVSCEVAALHRGVSTDHLCQHSGICIN-- 1038
Query: 1381 RGNWDCGAGEECIRKGCGRVCSPAQEPVVGICVDQCQRHWEC-----GPRMRCV----ST 1533
G C + G S +E + + CQ C G R CV
Sbjct: 1039 -----AGNSHHC-QCPLGYTGSYCEEQLDECSSNPCQHGATCRDFIGGYRCECVPGYQGV 1092
Query: 1534 GCGHICSPAQDQVEQRPGKCPVL--------PKGTIGLCAEF----CSGDDSCPSGQKCC 1677
C + Q+Q Q G C L P GT GL E C G C +G +C
Sbjct: 1093 NCEYEVDECQNQPCQNGGTCVDLVNHFKCSCPPGTRGLLCEENIDDCVGGPHCLNGGQCV 1152
Query: 1678 SHGCGHSCQ 1704
G+SC+
Sbjct: 1153 DRIGGYSCR 1161
>ref|XP_858228.1| PREDICTED: similar to notch 2 preproprotein isoform 3 [Canis
familiaris].
Length = 2473
Score = 73.6 bits (179), Expect = 7e-13
Identities = 131/557 (23%), Positives = 192/557 (34%), Gaps = 47/557 (8%)
Frame = +1
Query: 193 VCSPIQQREACEHQCRE--DRDCGGGHQCVRKGCGHVCAPVHQVDVGICVMECRVDQD-- 360
+C+P Q + C E + C C ++C + G M+C D D
Sbjct: 860 LCAPGWQGQRCTIDIDECVSKPCMNHGLCHNTQGSYMC----ECPPGFSGMDCEDDIDDC 915
Query: 361 ----CGEGRLCIS--NGCGRVCFPVRRREACEHQCRE--DRDCGSGHQCVRRGCGHVCAP 516
C G C+ N +C P + C+ E C +G C + C
Sbjct: 916 LANPCQNGGSCVDGVNTFSCLCHPGFIGDKCQTDMNECLSEPCKNGGTCSDYVNSYTCKC 975
Query: 517 VHQVDVGIC---VTECRVDQDCGEGRLCIS--NGCGRVCFPG-RREGCEHQCREDRDCGS 678
D C + EC + C G C+ N +C G C H+ E C S
Sbjct: 976 QAGFDGVHCENNIDEC-TESSCFNGGTCVDGINSFSCLCPLGFTGPFCLHEINE---CNS 1031
Query: 679 GHQCVRKGCGHVCAPVHQVGICVTECNVDQDCGEGRQCTSNGCGRVCSPVQQEDVGICVT 858
H C+ +G +C V +G C + G+ Q N C R SP + + G C+
Sbjct: 1032 -HPCLNEG---IC--VDGLGTYRCTCPLGYT-GKNCQTLVNLCSR--SPCKNK--GTCIQ 1080
Query: 859 ECKVDQDCGEGRRCTSNGCGRVCSP--VQQKEACEHQ-CREDRDCGSGHQCVRKGCGHVC 1029
E K + C C S G C V + A H+ D C C+ G H C
Sbjct: 1081 E-KAESRC----LCPSGWAGAYCDVPNVSCEVAALHRGVSTDHLCQHSGICINAGNSHHC 1135
Query: 1030 APVHQVDVGICVTECKVDQD------CGEGRRCAS--NGCGRVCSPAQQREACEHQC*E- 1182
Q +G + C+ D C G C G C P Q CE++ E
Sbjct: 1136 ----QCPLGYTGSYCEEQLDECSSNPCQHGATCRDFIGGYRCECVPGYQGVNCEYEVDEC 1191
Query: 1183 -DKDCGSGHQCVRKGCGHVCSPIPQVGICVTECNVDQDCGAGRRCTSNGCGRVCSPPQGG 1359
++ C +G CV CS P + E N+D DC G C + G C GG
Sbjct: 1192 QNQPCQNGGTCVDLVNHFKCSCPPGTRGLLCEENID-DCVGGPHCLNGG---QCVDRIGG 1247
Query: 1360 -------GLCVNRCRGNWDCGAGEECIRKGCGRV----CSPAQEPVVGICVD-----QCQ 1491
G RC G+ + EC+ C C + +C C+
Sbjct: 1248 YSCRCLPGFAGERCEGDIN-----ECLSNPCSSEGSLDCIQLTNDYLCVCRSAFTGRHCE 1302
Query: 1492 RHWECGPRMRCVSTGCGHICSPAQDQVEQRPGKCPVLPKGTIGLCAEFCSGDDSCPSGQK 1671
+ P+M C++ G C+ A + + +CP G G + G C G++
Sbjct: 1303 TFIDVCPQMPCLNGGT---CAVASNMPDGFICRCP---PGFSGAKCQSSCGQVKCRRGEQ 1356
Query: 1672 CCSHGCGHSCQTAVPDE 1722
C G C P +
Sbjct: 1357 CVHTASGPRCFCPNPQD 1373
Score = 66.6 bits (161), Expect = 8e-11
Identities = 142/593 (23%), Positives = 198/593 (33%), Gaps = 58/593 (9%)
Frame = +1
Query: 106 VDVGICVTECKVDQDCGAGRRCTSNGCGRVCSPIQQREACE-HQCREDRDCGGGHQCVRK 282
V+ G+CVT C +C G C Q R+ CE ++C+ C +
Sbjct: 36 VNEGVCVTYHNGTGYC----KCPEGFLGEYC---QHRDPCERNRCQNGGTCVAQAMLGKA 88
Query: 283 GCG---------------HVCAPVHQ-VDVGICVMECRVDQDCGEGRLCISNGCGRVCFP 414
C H C H ++ G C M R D +C C G++C
Sbjct: 89 TCRCALGFTGDDCQYSTTHPCFVSHPCLNGGTCHMHSRDDYEC----TCQVGFTGKLC-- 142
Query: 415 VRRREAC-EHQCREDRDCGS-----GHQCVRRGCGHVCAPVHQVDVGICVTECRVDQDCG 576
+ +AC H C C + +C+ G C I V EC + C
Sbjct: 143 -QWTDACLSHPCANGSTCTTVANQFSCKCLTGFTGQKCE--------IDVNECDIPGQCQ 193
Query: 577 EGRLCISNGCGRVCFPGRREGCEHQCREDRDCGSGH-QCVRKGC--GHVCAPVHQVGICV 747
G C++ PG + Q + C S + C C G C Q G
Sbjct: 194 HGGTCLN-------LPGSYQCQCPQGFTGKHCDSPYVPCAPSPCVNGGTC---RQTGDFT 243
Query: 748 TECNVDQDCGEGRQCTSNGCGRVCSPVQQEDVGICVTECKVDQDCGEGRRCTSNGCGRVC 927
ECN EG C N C + ++ G+CV +C RC G+ C
Sbjct: 244 FECNCLPGF-EGITCERNIDD--CPNHKCQNGGVCVDGVNT-YNC----RCPPQWTGQFC 295
Query: 928 SPVQQKEACEHQCREDRDCGSGHQCVRKGCGHVCAPVHQVDVGICVTECKVDQDCGEG-R 1104
+ E + + C +G C + G+ C +CV D DC E
Sbjct: 296 T-----EDVDECLLQPNACQNGGTCTNRNGGYGC---------VCVNGWSGD-DCSENID 340
Query: 1105 RCASNGC--GRVCSPAQQREACEHQC*EDKD---CGSGHQCVRKGC--GHVCSPIPQVGI 1263
CA C G C +C C E K C C+ C G +C P G
Sbjct: 341 DCAFASCTPGSTCIDRVASFSC--MCPEGKAGLLCHLDDACISNPCHKGALCDTNPLNGQ 398
Query: 1264 CVTECNVDQDCGAGRRCTSN--GCGRVCSPP-QGGGLCVNRCRGNWDCGAGEECIRKGCG 1434
+ C G CT + C S P + G CVN G + C EC++ G
Sbjct: 399 YICTC---PQGFKGADCTEDVDECAMANSNPCEHAGKCVNT-DGAFHC----ECLKGYAG 450
Query: 1435 RVCSPAQEPVVGIC-VDQCQRHWEC-----GPRMRCVSTGCGHICSPAQDQVEQRP---- 1584
C E + C D CQ C G C+ G C ++ + P
Sbjct: 451 PRC----EMDINECHSDPCQNDATCLDKIGGFTCLCMPGFKGVHCELEINECQSNPCVNN 506
Query: 1585 GKCP--------VLPKGTIGLCAEFCSGDDS---CPSGQKCCSHGCGHSCQTA 1710
G+C + P G G + D S C +G KC H G+ CQ A
Sbjct: 507 GQCVDKVNRFQCLCPPGFTGPVCQIDIDDCSSTPCLNGAKCIDHPNGYECQCA 559
Score = 57.0 bits (136), Expect = 7e-08
Identities = 146/654 (22%), Positives = 206/654 (31%), Gaps = 124/654 (18%)
Frame = +1
Query: 115 GICVTECKVDQDCGAGRRCTSNGC-------GRVCSPIQQREACEHQCRE--DRDCGGGH 267
G C+++ D A C C VCSP + C E C G
Sbjct: 636 GTSGVNCEINFDDCASNPCVHGVCMDGINRYSCVCSPGFTGQRCNIDIDECASNPCRKGA 695
Query: 268 QCVRKGCGHVCA-------PVHQVDVGICVMECRVDQDCGEGR-----LCISNGCGRVCF 411
C+ G C P V C+ + +C G LC + G C
Sbjct: 696 TCINDVNGFRCLCPEGPHRPSCYSQVNECLSSPCIHGNCTGGPSGYKCLCDAGWIGINC- 754
Query: 412 PVRRREACEHQCREDRDCGS---GHQCV-RRGC-GHVCAPVHQVDVGICVTECRVDQ--- 567
V + E + C+ C + G++C ++G G+ C QV++ C + ++Q
Sbjct: 755 EVDKNECLSNPCQNGGTCDNLVNGYRCTCKKGFKGYNC----QVNIDECASNPCLNQGTC 810
Query: 568 -DCGEGRLC------ISNGCGRVCFPGRREGCEHQ--CREDRDCGSGHQCVRKGCGHVCA 720
D G C C V P CE+ C+E D S + C+ CA
Sbjct: 811 FDNISGYTCHCVLPYTGKNCQTVLAPCSPNPCENAAVCKEAPDFES-YTCL-------CA 862
Query: 721 PVHQVGICVTECNVDQDCGEGRQCTSNGCGRVCSPVQQEDV-----GICVTECKVDQD-- 879
P Q C +D D + C ++G +C Q + G +C+ D D
Sbjct: 863 PGWQG----QRCTIDIDECVSKPCMNHG---LCHNTQGSYMCECPPGFSGMDCEDDIDDC 915
Query: 880 ----CGEGRRCTS--NGCGRVCSPVQQKEACEHQCRE--DRDCGSGHQCVRKGCGHVCAP 1035
C G C N +C P + C+ E C +G C + C
Sbjct: 916 LANPCQNGGSCVDGVNTFSCLCHPGFIGDKCQTDMNECLSEPCKNGGTCSDYVNSYTCKC 975
Query: 1036 VHQVDVGIC---VTECKVDQDCGEGRRCAS--NGCGRVCSPAQQREACEHQC*EDKDCGS 1200
D C + EC + C G C N +C C H E +C S
Sbjct: 976 QAGFDGVHCENNIDEC-TESSCFNGGTCVDGINSFSCLCPLGFTGPFCLH---EINECNS 1031
Query: 1201 GHQCVRKGC-----------------GHVC---------SPIPQVGICVTECNVDQDCGA 1302
H C+ +G G C SP G C+ E + C
Sbjct: 1032 -HPCLNEGICVDGLGTYRCTCPLGYTGKNCQTLVNLCSRSPCKNKGTCIQE-KAESRC-- 1087
Query: 1303 GRRCTSNGCGRVCSPP-------------------QGGGLCVNRCRGNWDCGAGEECIRK 1425
C S G C P Q G+C+N G C +
Sbjct: 1088 --LCPSGWAGAYCDVPNVSCEVAALHRGVSTDHLCQHSGICIN-------AGNSHHC-QC 1137
Query: 1426 GCGRVCSPAQEPVVGICVDQCQRHWEC-----GPRMRCV----STGCGHICSPAQDQVEQ 1578
G S +E + + CQ C G R CV C + Q+Q Q
Sbjct: 1138 PLGYTGSYCEEQLDECSSNPCQHGATCRDFIGGYRCECVPGYQGVNCEYEVDECQNQPCQ 1197
Query: 1579 RPGKCPVL--------PKGTIGLCAEF----CSGDDSCPSGQKCCSHGCGHSCQ 1704
G C L P GT GL E C G C +G +C G+SC+
Sbjct: 1198 NGGTCVDLVNHFKCSCPPGTRGLLCEENIDDCVGGPHCLNGGQCVDRIGGYSCR 1251
Database: RefSeq49_CP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,874,504
Number of sequences in database: 33,336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33336
Number of Hits to DB: 97,501,079
Number of extensions: 3474789
Number of successful extensions: 14791
Number of sequences better than 1.0e-05: 56
Number of HSP's gapped: 13843
Number of HSP's successfully gapped: 120
Length of query: 663
Length of database: 18,874,504
Length adjustment: 109
Effective length of query: 554
Effective length of database: 15,240,880
Effective search space: 8443447520
Effective search space used: 8443447520
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ITT01_0011_G11
(1989 letters)
Database: RefSeq49_MP.fasta
30,036 sequences; 15,617,559 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_112453.2| tenascin-X [Mus musculus]. 112 1e-24
Alignment gi|NP_035737.2| tenascin [Mus musculus]. 85 2e-16
Alignment gi|NP_032538.2| prolow-density lipoprotein receptor-related pro... 85 2e-16
Alignment gi|NP_598682.2| nuclear transcription factor, X-box binding-lik... 79 1e-14
Alignment gi|NP_001001979.1| multiple epidermal growth factor-like domain... 78 3e-14
Alignment gi|NP_076349.1| keratin-associated protein 5-3 [Mus musculus]. 76 8e-14
Alignment gi|NP_001028368.2| NFX1-type zinc finger-containing protein 1 [... 75 2e-13
Alignment gi|NP_001027586.1| platelet endothelial aggregation receptor 1 ... 73 7e-13
Alignment gi|NP_001027585.1| platelet endothelial aggregation receptor 1 ... 73 7e-13
Alignment gi|NP_690012.2| platelet endothelial aggregation receptor 1 pre... 73 7e-13
>ref|NP_112453.2| tenascin-X [Mus musculus].
Length = 3126
Score = 112 bits (279), Expect = 1e-24
Identities = 159/610 (26%), Positives = 203/610 (33%), Gaps = 86/610 (14%)
Frame = +1
Query: 145 QDCGAGRRCTSNGCGRVCSPIQQREACEHQCREDRDCGGGHQCVRKGCGHVC-APVHQVD 321
+DC RC C VC P +C DC G +CV+ C VC A D
Sbjct: 176 EDCNDQGRCVRGRC--VCFPGYSGPSCSWPSCPG-DCQGRGRCVKGVC--VCRAGFSGPD 230
Query: 322 VG--ICVMECRVDQDCGEGRL----------CISNGCGRVCFPVRRREACEHQCREDRDC 465
C C C EGR C C R C +R CE+
Sbjct: 231 CSQRSCPRNCNQRGRCEEGRCVCDPGYSGEDCGVRSCPRGC---SQRGRCENGLCVCNPG 287
Query: 466 GSGHQCVRRGCGHVCAPVHQVDVGICVTE-------CRVDQ---DCGEGRLCISNGCGRV 615
SG C R C C+ + + G CV + C + DCG+G C+ C V
Sbjct: 288 YSGEDCGVRNCPRGCSQRGRCEDGRCVCDPGYSGEDCSMRTCPWDCGDGGRCVDGRC--V 345
Query: 616 CFPG------RREGCEHQCREDRDCGSGHQCVRKG-CGHVCAPVHQVGICVTECNVDQDC 774
C+PG C CR C G G G C V C +CN C
Sbjct: 346 CWPGYSGEDCSTRTCPRDCRGRGRCEDGECICDAGYSGDDCG----VRSCPGDCNQRGHC 401
Query: 775 GEGR----------QCTSNGCGRVCSPVQQEDVGICVTECKVD-QDCG--------EGR- 894
+GR C++ C R C + + G+CV +DCG GR
Sbjct: 402 EDGRCVCWPGYTGADCSTRACPRDCRGRGRCEDGVCVCHAGYSGEDCGVRSCPGDCRGRG 461
Query: 895 RCTSNGC-------GRVCSPVQQKEACEHQCREDRDC----------GSGHQCVRKGCGH 1023
C S C GR C AC CR C +G C + C
Sbjct: 462 NCESGRCVCWPGYTGRDCG----TRACPGDCRGRGRCVDGRCVCNPGFTGEDCGSRRCPG 517
Query: 1024 VCAPVHQVDVGICVTECKVDQDCGEGRRCASNGCGRVCSPAQQREACEHQC*EDKDCGSG 1203
C + G+CV C V G C++ C C + R C + E + SG
Sbjct: 518 DCRGHGHCENGVCV--CAVGY---SGDDCSTRSCPSDC---RGRGQCLNGLCECDEGYSG 569
Query: 1204 HQCVRKGCGHVCSP--IPQVGICV-------TECNV---DQDCGAGRRCTSNGCGRVCSP 1347
C + C CS + Q G+C+ +C++ DC RC C VC+P
Sbjct: 570 EDCGIRRCPRDCSQHGVCQDGLCMCHAGYAGEDCSIRTCPADCRRRGRCEDGRC--VCNP 627
Query: 1348 PQGGGLCVNR-----CRGNWDCGAGE-ECIRKGCGRVCSPAQEPVVGICVDQCQRHWECG 1509
G C R CRG C G C G C +EP C CG
Sbjct: 628 GYTGPACATRTCPADCRGRGRCVQGVCMCYVGYSGEDCG-QEEPPASACPG------GCG 680
Query: 1510 PRMRCVSTGCGHICSPAQDQVEQRPGKCPVLPKGTIGLCAEFCSGDDSCPSGQKCCSHG- 1686
PR C + C +C VE G P I C C C G+ C G
Sbjct: 681 PRELCRAGQC--VC------VEGFRG-----PDCAIQTCPGDCRSRGECIQGRCVCQEGY 727
Query: 1687 CGHSCQTAVP 1716
G C +P
Sbjct: 728 AGDDCGEEIP 737
>ref|NP_035737.2| tenascin [Mus musculus].
Length = 2019
Score = 84.7 bits (208), Expect = 2e-16
Identities = 125/501 (24%), Positives = 176/501 (35%), Gaps = 58/501 (11%)
Frame = +1
Query: 151 CGAGRRCTSNGCGRVCSPIQQREAC-EHQCREDRDCGGGHQCVRKGCGHVCAPVHQVDVG 327
C ++ GCG VC P + C E C +C QC+ C +C D G
Sbjct: 161 CSGRGNFSAEGCGCVCEPGWKGPNCSEPDC--PGNCNLRGQCLDGQC--IC------DEG 210
Query: 328 ICVMEC---RVDQDCGEGRLCISNGCGRVCF-----PVRRREACEHQCREDRDCGSGHQC 483
+C DC + C++ C VCF P E C C E+ +C
Sbjct: 211 FTGEDCSQLACPNDCNDQGRCVNGVC--VCFEGYAGPDCGLEVCPVPCSEEHGMCVDGRC 268
Query: 484 VRRG--CGHVCAPVHQVDVGICVTECRVDQDCGEGRLCISNGCGRVCFPG-RREGC-EHQ 651
V + G C + +C+ C GR C+ N C VC G E C E
Sbjct: 269 VCKDGFAGEDC------NEPLCLNNC-----YNRGR-CVENEC--VCDEGFTGEDCSELI 314
Query: 652 CREDRDCGSGHQCVRKGC-------GHVCAPVHQVGICVTECNVDQDCGEGR-QCTSNGC 807
C DC +C+ C G C + C +C C EG+ C
Sbjct: 315 C--PNDCFDRGRCINGTCYCEEGFTGEDCGEL----TCPNDCQGRGQCEEGQCVCNEGFA 368
Query: 808 GRVCS----PVQQEDVGICVT-ECKVDQ-----DCGEGR---------RCTSNGCGRVCS 930
G CS P G C+ +C+ D DCG+ + RC + C VC
Sbjct: 369 GADCSEKRCPADCHHRGRCLNGQCECDDGFTGADCGDLQCPNGCSGHGRCVNGQC--VCD 426
Query: 931 PVQQKEACEHQCREDRDCGSGHQCVRKGCGHVCAPVHQVDVGICVTECKVDQDCGEGRRC 1110
E C Q R DC + CV+ C +C Q G +E DC + RC
Sbjct: 427 EGYTGEDCS-QRRCPNDCHNRGLCVQGKC--IC---EQGFKGFDCSEMSCPNDCHQHGRC 480
Query: 1111 ASNGCGRVCSPAQQREAC-EHQC*EDKDCGSGHQCVRKGCGHVCSPIPQVGICVTECNVD 1287
+ C +C E C + +C +DC +CV C +C G E +
Sbjct: 481 VNGMC--ICDDDYTGEDCRDRRC--PRDCSQRGRCVDGQC--ICED-GFTGPDCAELSCP 533
Query: 1288 QDCGAGRRCTSNGC-------GRVCSPPQGGGLCVNRCRGNWDCGAGE----------EC 1416
DC RC + C G+ C + C + C G C G+ +C
Sbjct: 534 SDCHGHGRCVNGQCICHEGFTGKDCKEQR----CPSDCHGQGRCEDGQCICHEGFTGLDC 589
Query: 1417 IRKGCGRVCSPAQEPVVGICV 1479
++ C CS + V G C+
Sbjct: 590 GQRSCPNDCSNQGQCVSGRCI 610
Score = 81.6 bits (200), Expect = 2e-15
Identities = 124/493 (25%), Positives = 171/493 (34%), Gaps = 49/493 (9%)
Frame = +1
Query: 385 SNGCGRVCFPVRRREAC-EHQCREDRDCGSGHQCVRRGCGHVCAPVHQVDVGICVTECR- 558
+ GCG VC P + C E C +C QC+ C +C D G +C
Sbjct: 169 AEGCGCVCEPGWKGPNCSEPDC--PGNCNLRGQCLDGQC--IC------DEGFTGEDCSQ 218
Query: 559 --VDQDCGEGRLCISNGCGRVCFPGRR------EGCEHQCREDRDCGSGHQCVRKG--CG 708
DC + C++ C VCF G E C C E+ +CV K G
Sbjct: 219 LACPNDCNDQGRCVNGVC--VCFEGYAGPDCGLEVCPVPCSEEHGMCVDGRCVCKDGFAG 276
Query: 709 HVCAPVHQVGICVTECN-----VDQDCGEGRQCTSNGCGRVCSPVQQEDVGICVTECKVD 873
C +C+ C V+ +C T C + P D G C+
Sbjct: 277 EDC----NEPLCLNNCYNRGRCVENECVCDEGFTGEDCSELICPNDCFDRGRCINGTCYC 332
Query: 874 QDCGEGRRCTSNGCGRVCSPVQQKEACEHQCREDRDCGSGHQCVRKGCGHVCAPVHQVDV 1053
++ G C C C Q E + C E +G C K C C H+
Sbjct: 333 EEGFTGEDCGELTCPNDCQGRGQCEEGQCVCNEGF---AGADCSEKRCPADCH--HR--- 384
Query: 1054 GICVT-ECKVDQDCGEGRRCASNGCGRVCSPAQQREACEHQC*EDKDCGSGHQCVRKGCG 1230
G C+ +C+ D D G C C CS QC D+ +G C ++ C
Sbjct: 385 GRCLNGQCECD-DGFTGADCGDLQCPNGCSG--HGRCVNGQCVCDEGY-TGEDCSQRRCP 440
Query: 1231 HVCSPIPQVGICVTECNVDQDCGAGRRCTSNGCGRVCSPPQGGGLCVNRCRGNWDCGAGE 1410
+ C G+CV + + G C+ C C G CVN D GE
Sbjct: 441 NDCH---NRGLCVQGKCICEQGFKGFDCSEMSCPNDCHQH---GRCVNGMCICDDDYTGE 494
Query: 1411 ECIRKGCGRVCSPAQEPVVGICVDQCQRHW------------ECGPRMRCVSTGC-GHIC 1551
+C + C R CS V G C+ C+ + +C RCV+ C H
Sbjct: 495 DCRDRRCPRDCSQRGRCVDGQCI--CEDGFTGPDCAELSCPSDCHGHGRCVNGQCICHEG 552
Query: 1552 SPAQDQVEQR-------PGKCP----VLPKGTIGL------CAEFCSGDDSCPSGQKCCS 1680
+D EQR G+C + +G GL C CS C SG+ C+
Sbjct: 553 FTGKDCKEQRCPSDCHGQGRCEDGQCICHEGFTGLDCGQRSCPNDCSNQGQCVSGRCICN 612
Query: 1681 HG-CGHSCQTAVP 1716
G G C P
Sbjct: 613 EGYTGIDCSEVSP 625
Score = 65.9 bits (159), Expect = 1e-10
Identities = 94/374 (25%), Positives = 121/374 (32%), Gaps = 57/374 (15%)
Frame = +1
Query: 148 DCGAGRRCTSNGC-------GRVCSPIQQREACEHQCREDRDC-GGGHQCVRKGCGHVCA 303
+C RC N C G CS + C + C + C G C G C
Sbjct: 287 NCYNRGRCVENECVCDEGFTGEDCSEL----ICPNDCFDRGRCINGTCYCEEGFTGEDCG 342
Query: 304 PVHQVDVGICVMECRVDQDCGEGRLCISNG-CGRVCFPVRRREACEH-------QCRED- 456
+ C +C+ C EG+ + G G C R C H QC D
Sbjct: 343 EL------TCPNDCQGRGQCEEGQCVCNEGFAGADCSEKRCPADCHHRGRCLNGQCECDD 396
Query: 457 ----RDCG--------SGH-QCVRRGCGHVCAPVHQVDVGICVTEC---RVDQDCGEGRL 588
DCG SGH +CV C VC D G +C R DC L
Sbjct: 397 GFTGADCGDLQCPNGCSGHGRCVNGQC--VC------DEGYTGEDCSQRRCPNDCHNRGL 448
Query: 589 CISNGCGRVCFPGRREGCEHQCREDRDCGSGHQCVRKGCGHVCAPVHQVGICVTECNVDQ 768
C+ C +C G + G C C + C HQ G CV +
Sbjct: 449 CVQGKC--ICEQGFK---------------GFDCSEMSCPNDC---HQHGRCVNGMCICD 488
Query: 769 DCGEGRQCTSNGCGRVCSPVQQEDVGICV----------TECKVDQDCGEGRRCTSNGC- 915
D G C C R CS + G C+ E DC RC + C
Sbjct: 489 DDYTGEDCRDRRCPRDCSQRGRCVDGQCICEDGFTGPDCAELSCPSDCHGHGRCVNGQCI 548
Query: 916 ------GRVCSPVQQKEACEHQCR-EDRDC-----GSGHQCVRKGCGHVCAPVHQVDVGI 1059
G+ C + C Q R ED C +G C ++ C + C+ Q G
Sbjct: 549 CHEGFTGKDCKEQRCPSDCHGQGRCEDGQCICHEGFTGLDCGQRSCPNDCSNQGQCVSGR 608
Query: 1060 CV-TECKVDQDCGE 1098
C+ E DC E
Sbjct: 609 CICNEGYTGIDCSE 622
Score = 55.8 bits (133), Expect = 1e-07
Identities = 79/326 (24%), Positives = 111/326 (34%), Gaps = 16/326 (4%)
Frame = +1
Query: 772 CGEGRQCTSNGCGRVCSP------VQQEDVGICVTECKVDQDCGEGRR-CTSNGCGRVCS 930
C ++ GCG VC P + D C C + C +G+ C G CS
Sbjct: 161 CSGRGNFSAEGCGCVCEPGWKGPNCSEPD---CPGNCNLRGQCLDGQCICDEGFTGEDCS 217
Query: 931 PVQQKEACEHQCREDRDCGSGHQCVRKG-----CG-HVCAPVHQVDVGICVTECKVDQDC 1092
+ AC + C + C +G +G CG VC + G+CV V +D
Sbjct: 218 QL----ACPNDCNDQGRCVNGVCVCFEGYAGPDCGLEVCPVPCSEEHGMCVDGRCVCKDG 273
Query: 1093 GEGRRCASNGCGRVCSPAQQREAC-EHQC*EDKDCGSGHQCVRKGCGHVCSPIPQVGICV 1269
G C C C R C E++C D+ +G C C + C G C+
Sbjct: 274 FAGEDCNEPLCLNNC---YNRGRCVENECVCDEGF-TGEDCSELICPNDCF---DRGRCI 326
Query: 1270 TECNVDQDCGAGRRCTSNGCGRVCSPPQGGGLCVNRCRGNWDCGAGEECIRKG-CGRVCS 1446
+ C T CG + C N C+G C G+ +G G CS
Sbjct: 327 -----NGTCYCEEGFTGEDCGELT--------CPNDCQGRGQCEEGQCVCNEGFAGADCS 373
Query: 1447 PAQEPVVGICVDQCQRHWECGPRMRCVSTGCGHICSPAQDQVEQRPGKCPVLPKGTIGLC 1626
+ P +C R RC++ C C + +CP
Sbjct: 374 EKRCPA------------DCHHRGRCLNGQCE--CDDGFTGADCGDLQCP---------- 409
Query: 1627 AEFCSGDDSCPSGQKCCSHG-CGHSC 1701
CSG C +GQ C G G C
Sbjct: 410 -NGCSGHGRCVNGQCVCDEGYTGEDC 434
>ref|NP_032538.2| prolow-density lipoprotein receptor-related protein 1 [Mus musculus].
Length = 4545
Score = 84.7 bits (208), Expect = 2e-16
Identities = 137/571 (23%), Positives = 194/571 (33%), Gaps = 76/571 (13%)
Frame = +1
Query: 205 IQQREACEHQCREDRDCGGGHQCVRKGCGHVCAPVHQVDVGICVMECRVDQDCGEGRLCI 384
++Q + H C+ + + G GH CA +G G+GR C+
Sbjct: 3285 LRQPDVPNHPCKVNNGGCSNLCLLSPGGGHKCACPTNFYLG------------GDGRTCV 3332
Query: 385 SNGCGRVCFPVRRREACEH--QCREDRDCGSGHQCVRRGCGHV-CAPVH-QVDVGICVTE 552
SN C F + + +C + DCG H C C P Q GIC
Sbjct: 3333 SN-CTASQFVCKNDKCIPFWWKCDTEDDCGD-HSDEPPDCPEFKCRPGQFQCSTGICTNP 3390
Query: 553 ---CRVDQDCGEGRLCISNGCGRVCFPGRREGCEH---------QCREDRDCGSGHQCVR 696
C D DC + +N VC P + + C + +C +CG G
Sbjct: 3391 AFICDGDNDCQDNS-DEANCDIHVCLPSQFK-CTNTNRCIPGIFRCNGQDNCGDGED--E 3446
Query: 697 KGCGHVCAPVHQVGICVTE--------CNVDQDCGEGRQ----CTSNGCGRVCSPVQQED 840
+ C V +Q +T+ C+ D DC +G CT CG + +D
Sbjct: 3447 RDCPEVTCAPNQFQCSITKRCIPRVWVCDRDNDCVDGSDEPANCTQMTCG--VDEFRCKD 3504
Query: 841 VGICVT---ECKVDQDCGEGRRCTSNGCG-RVCSPVQ---QKEAC---EHQCREDRDCGS 990
G C+ +C + DCG+G C R C P Q + C QC D DCG
Sbjct: 3505 SGRCIPARWKCDGEDDCGDGSDEPKEECDERTCEPYQFRCKNNRCVPGRWQCDYDNDCGD 3564
Query: 991 G---HQCVRKGCGHV---CAPVHQVDVGICVT---ECKVDQDCGEGRRCASNGCGRVCSP 1143
C + C CA G C+ +C D DC +G C C
Sbjct: 3565 NSDEESCTPRPCSESEFSCAN------GRCIAGRWKCDGDHDCADGSD--EKDCTPRCDM 3616
Query: 1144 AQQREACEH------QC*EDKDCGSGHQCVRKGCGHVCSPIPQVGICVT-------ECNV 1284
Q + H +C D DC G G G P+ + T +C+
Sbjct: 3617 DQFQCKSGHCIPLRWRCDADADCMDGSDEEACGTGVRTCPLDEFQCNNTLCKPLAWKCDG 3676
Query: 1285 DQDCGAGRRCTSNGCGRVCSPPQGGGLCVN---------RCRGNWDCGAGEECIRKGCGR 1437
+ DCG C R PP C N +C G +CG G +
Sbjct: 3677 EDDCGDNSDENPEECARFICPPNRPFRCKNDRVCLWIGRQCDGVDNCGDGTD------EE 3730
Query: 1438 VCSP--AQEPVVGICVDQCQRHWECGPRMRCVSTG--CGHI--CSPAQDQVEQRPGKCPV 1599
C P AQ P C D ++ + C RC+S+ C C D+ + C +
Sbjct: 3731 DCEPPTAQNP---HCKD--KKEFLC-RNQRCLSSSLRCNMFDDCGDGSDEED-----CSI 3779
Query: 1600 LPKGT-IGLCAEFCSGDDSCPSGQKCCSHGC 1689
PK T A C + C +K C
Sbjct: 3780 DPKLTSCATNASMCGDEARCVRTEKAAYCAC 3810
Score = 71.6 bits (174), Expect = 2e-12
Identities = 122/521 (23%), Positives = 166/521 (31%), Gaps = 72/521 (13%)
Frame = +1
Query: 355 QDCGEGRLCISNG-CGRVCFPVRRREACEHQCREDRDCGSGHQCVRRGCGHVCAPVHQVD 531
Q G + ++NG C +C C C ED+ + +V P Q
Sbjct: 801 QQVGTNKCRVNNGGCSSLCLATPGSRQCA--CAEDQVLDTDGVTCLANPSYVPPPQCQPG 858
Query: 532 VGICVT--------ECRVDQDCGEGRLCISNGCGRVCFPGRREGCEHQ--------CRED 663
C +C D DC + C + P R CE+ C D
Sbjct: 859 EFACANNRCIQERWKCDGDNDCLDNSDEAPALCHQHTCPSDRFKCENNRCIPNRWLCDGD 918
Query: 664 RDCGSGHQCVRKGCGHVCAPVHQV----GICVT---ECNVDQDCGEGRQCTSNGCGRVCS 822
DCG+ C P +Q G C+ C++D DCG+ +++ C
Sbjct: 919 NDCGNSEDESNATCSARTCPPNQFSCASGRCIPISWTCDLDDDCGDRSDESASCAYPTCF 978
Query: 823 PVQQE--DVGICVT---ECKVDQDCGEGRRCTSNGCGRVCSPVQQKEACEHQCREDRDCG 987
P+ Q + G C+ C D DCG+ GC CS Q K C
Sbjct: 979 PLTQFTCNNGRCININWRCDNDNDCGD--NSDEAGCSHSCSSTQFK------------CN 1024
Query: 988 SGHQCVRKGCGHVCAPVHQVDVGICVTECKVDQDCGE-----GRRCAS------NGC--- 1125
SG C P H C D DCG+ C + GC
Sbjct: 1025 SGR----------CIPEHWT--------CDGDNDCGDYSDETHANCTNQATRPPGGCHSD 1066
Query: 1126 ------GRVCSPAQQREACEHQC*EDKDC-GSGHQCVRKGCGHVCSPIPQVGI-----CV 1269
+C P + R C D DC S + +G HVC P + G C+
Sbjct: 1067 EFQCRLDGLCIPLRWR------CDGDTDCMDSSDEKSCEGVTHVCDPNVKFGCKDSARCI 1120
Query: 1270 TE---CNVDQDC----------GAGRRCTSNGCGR---VCSPPQGGGLCVNRCRGNWDCG 1401
++ C+ D DC R S+ C VC PP C G DCG
Sbjct: 1121 SKAWVCDGDSDCEDNSDEENCEALACRPPSHPCANNTSVCLPPD------KLCDGKDDCG 1174
Query: 1402 AGEECIRKGCGRVCSPAQEPVVGICVDQCQRHWECGPRMRCVSTGCGHICSPAQDQVEQR 1581
G + G +C DQC + + GC H CS A
Sbjct: 1175 DGSD-----EGELC------------DQCSLN----------NGGCSHNCSVA------- 1200
Query: 1582 PGKCPVLPKGTIGLCAEFCSGDDSCPSGQKCCSH-GCGHSC 1701
PG+ V + L E S + +C C H C C
Sbjct: 1201 PGEGIVC---SCPLGMELGSDNHTCQIQSYCAKHLKCSQKC 1238
>ref|NP_598682.2| nuclear transcription factor, X-box binding-like 1 [Mus musculus].
Length = 918
Score = 79.0 bits (193), Expect = 1e-14
Identities = 124/519 (23%), Positives = 168/519 (32%), Gaps = 95/519 (18%)
Frame = +1
Query: 430 ACEHQCREDRDCGSGHQCVRRGCGHVCAPVHQVDVGICVTE--------CRVDQ-----D 570
+C C + GH+C+ C P ++ C + C Q
Sbjct: 259 SCGQVCEREFKPSCGHKCLLLCHPGPCPPCPKMVTTTCYCKKAKPIPRRCSAKQWSCQLP 318
Query: 571 CGEGRLCISNGCGRVCFPGRREGCEHQCREDRDCGSGHQCVRKGCGHVCAPVHQVGICVT 750
CG LC + C C G + C R+ C G + + C +PV
Sbjct: 319 CGRKLLCGHHKCENPCHAGNCQPCPRVSRQ--KCVCGKKVAERSC---ASPV-------- 365
Query: 751 ECNVDQDCGEGRQCTSNGCGRVC---------------SPVQQ--------EDVGICVTE 861
+ DQ CG+ C ++ C +VC P Q+ EDV C
Sbjct: 366 -WHCDQVCGKTLPCGNHTCEQVCHVGACGECPRSGKRSCPCQKSKFSLPCTEDVPTCGDS 424
Query: 862 CKVDQDCGEGR---RCTSNGCGRVCSPVQQKEA----------------CEHQCREDRDC 984
C +CG R RC C C +K+ CE +C + RDC
Sbjct: 425 CDKILECGIHRCSQRCHRGPC-ETCRQEVEKQCRCGKHTKRMPCHKPYLCETKCVKMRDC 483
Query: 985 GSGHQCVRKGCGHVCAPVHQVDVGICVTECKVDQDCGEGRRCASNGCGRVCSPAQQREAC 1164
HQC RK C C P DQ+CG C ++ C VC R +C
Sbjct: 484 -QKHQCRRKCCPGNCPP--------------CDQNCGRTLGCRNHKCPSVC----HRGSC 524
Query: 1165 EHQC*E--DKDCGSGHQCVRKGCGHVCSPIPQVGICVTECNVDQDCGAG----RRCTSNG 1326
+ C E D C G+ V CG + P C C+ C RC
Sbjct: 525 -YPCPETVDVKCNCGNAKVTVPCGRERTTRPPK--CKELCSRPPTCHHASQEKHRCHFGP 581
Query: 1327 CGRVCSPPQG-----GGLCVNRCR--------------GNWDCGAGEECIRKGCGRVCSP 1449
C P Q G LC C G W+ A I+ C P
Sbjct: 582 CPPCHQPCQKVLEKCGHLCPESCHDQALVKQTGRHQPSGPWEQPAEPAFIQTAL--PCPP 639
Query: 1450 AQEPVVGICVDQ---------------CQRHWECGPRMRCVSTGCGHICSPAQDQVEQRP 1584
Q P+ C+ + C+R CG +RC + C C +V+
Sbjct: 640 CQVPIPVECLGKHEVSPLPCHAVGPYSCKR--LCGRMLRCQNHTCMKECHKV-TEVDSST 696
Query: 1585 GKCPVLPKGTIGLCAEFCSGDDSCPSGQKCCSHGCGHSC 1701
GK P+ C E CS S P+G C H C C
Sbjct: 697 GKNKAGPE--CFHCEEGCS--KSRPAG---CPHPCVLPC 728
Score = 73.2 bits (178), Expect = 7e-13
Identities = 107/448 (23%), Positives = 146/448 (32%), Gaps = 57/448 (12%)
Frame = +1
Query: 109 DVGICVTECKVDQDCGAGR---RCTSNGCG-------RVCS--------PIQQREACEHQ 234
DV C C +CG R RC C + C P + CE +
Sbjct: 417 DVPTCGDSCDKILECGIHRCSQRCHRGPCETCRQEVEKQCRCGKHTKRMPCHKPYLCETK 476
Query: 235 CREDRDCGGGHQCVRKGCGHVCAPVHQVDVGICVMECRVDQDCGEGRLCISNGCGRVCFP 414
C + RDC HQC RK C C P DQ+CG C ++ C VC
Sbjct: 477 CVKMRDCQK-HQCRRKCCPGNCPPC--------------DQNCGRTLGCRNHKCPSVC-- 519
Query: 415 VRRREACEHQCREDRDCGSGHQCVRRGCGHVCAPVHQVDVGICVTECRVDQDCGEGRLCI 594
R +C + C E D V+ CG+ +V CG R
Sbjct: 520 --HRGSC-YPCPETVD-------VKCNCGNA----------------KVTVPCGRERTTR 553
Query: 595 SNGCGRVCFPGRREGCEHQCREDRDCGSG-----HQCVRK---GCGHVCAPVHQVGICVT 750
C +C R C H +E C G HQ +K CGH+C V
Sbjct: 554 PPKCKELC--SRPPTCHHASQEKHRCHFGPCPPCHQPCQKVLEKCGHLCPESCHDQALVK 611
Query: 751 ECNVDQDCGEGRQC-------TSNGCGRVCSPVQQEDVG-----------ICVTECKVDQ 876
+ Q G Q T+ C P+ E +G + CK +
Sbjct: 612 QTGRHQPSGPWEQPAEPAFIQTALPCPPCQVPIPVECLGKHEVSPLPCHAVGPYSCK--R 669
Query: 877 DCGEGRRCTSNGCGRVCSPVQQKEA-------------CEHQCREDRDCGSGHQCVRKGC 1017
CG RC ++ C + C V + ++ CE C + R G H CV
Sbjct: 670 LCGRMLRCQNHTCMKECHKVTEVDSSTGKNKAGPECFHCEEGCSKSRPAGCPHPCVLPCH 729
Query: 1018 GHVCAPVHQVDVGICVTECKVDQDCGEGRRCASNGCGRVCSPAQQREACEHQC*EDKDCG 1197
C P Q+ C CK+ E R+ + S C++QC ++ CG
Sbjct: 730 PGKCPPCVQMLRIKC--HCKITSLYVECRKITTADV----SEKNLLSCCKNQCPKELPCG 783
Query: 1198 SGHQCVRKGCGHVCSPIPQVGICVTECN 1281
H C + G C CN
Sbjct: 784 -----------HRCKEMCHPGECPFNCN 800
Score = 62.4 bits (150), Expect = 1e-09
Identities = 88/374 (23%), Positives = 123/374 (32%), Gaps = 39/374 (10%)
Frame = +1
Query: 592 ISNGCGRVCFPGRREGCEHQCR---EDRDCGSGHQCVRKGCGHVCAPVHQVGICVTECNV 762
+ + CG+VC + C H+C C + V C A + +
Sbjct: 256 VPHSCGQVCEREFKPSCGHKCLLLCHPGPCPPCPKMVTTTCYCKKAKPIPRRCSAKQWSC 315
Query: 763 DQDCGEGRQCTSNGCGRV-----CSPVQQEDVGICVTECKV------------DQDCGEG 891
CG C + C C P + CV KV DQ CG+
Sbjct: 316 QLPCGRKLLCGHHKCENPCHAGNCQPCPRVSRQKCVCGKKVAERSCASPVWHCDQVCGKT 375
Query: 892 RRCTSNGCGRVC-------SPVQQKEACEHQ-------CRED-RDCGSGHQCVRKGCG-H 1023
C ++ C +VC P K +C Q C ED CG + + CG H
Sbjct: 376 LPCGNHTCEQVCHVGACGECPRSGKRSCPCQKSKFSLPCTEDVPTCGDSCDKILE-CGIH 434
Query: 1024 VCAP-VHQVDVGICVTECKVDQDCGEGRRCASNGCGRVCSPAQQREACEHQC*EDKDCGS 1200
C+ H+ C E + CG+ + P + CE +C + +DC
Sbjct: 435 RCSQRCHRGPCETCRQEVEKQCRCGKHTK---------RMPCHKPYLCETKCVKMRDC-Q 484
Query: 1201 GHQCVRKGCGHVCSPIPQVGICVTECNVDQDCGAGRRCTSNGCGRVCSPPQGGGLCVNRC 1380
HQC RK C C P DQ+CG C ++ C VC G C C
Sbjct: 485 KHQCRRKCCPGNCPP------------CDQNCGRTLGCRNHKCPSVCH----RGSCY-PC 527
Query: 1381 RGNWD--CGAGEECIRKGCGRVCSPAQEPVVGICVDQCQRHWECGPRMRCVSTGCGHICS 1554
D C G + CGR + +C H + RC C
Sbjct: 528 PETVDVKCNCGNAKVTVPCGRERTTRPPKCKELCSRPPTCHHASQEKHRCHFGPCPPCHQ 587
Query: 1555 PAQDQVEQRPGKCP 1596
P Q +E+ CP
Sbjct: 588 PCQKVLEKCGHLCP 601
>ref|NP_001001979.1| multiple epidermal growth factor-like domains protein 10 precursor
[Mus musculus].
Length = 1147
Score = 77.8 bits (190), Expect = 3e-14
Identities = 146/615 (23%), Positives = 192/615 (31%), Gaps = 89/615 (14%)
Frame = +1
Query: 133 CKVDQDCGAGRRCTSNGCGRVCSPIQQREACEHQCREDR---DCGGGHQCVRKG-CGHVC 300
C + C G C + CSP E C+ +C C +CV G C HV
Sbjct: 277 CSQECQCHNGGTCDAATGQCHCSPGYTGERCQDECPVGSYGVRCAEACRCVNGGKCYHVS 336
Query: 301 APVHQVDVGICVMECRVDQDCGEGRLCISNGCGRVCFPVRRREACE----HQCRE-DRDC 465
G C+ E + E RLC G C +R C H C +C
Sbjct: 337 --------GTCLCEAGFSGELCEARLCPEGLYGIKC---DKRCPCHLDNTHSCHPMSGEC 385
Query: 466 GSGHQCVRRGCGHVCAPVHQVDVGICVTECRVDQDCGEGRLCISNGCGRVCFPG-RREGC 642
G C C+P G C+ C G C S C PG + C
Sbjct: 386 GCKPGWSGLYCNETCSP------GFYGEACQQICSCQNGADCDSVTGRCACAPGFKGTDC 439
Query: 643 EHQC---REDRDCGSGHQCVRKGCGH--VCAPVHQVGICVT------------------E 753
C R +C S R GC + VC+PV IC
Sbjct: 440 STPCPLGRYGINCSS-----RCGCKNDAVCSPVDGSCICKAGWHGVDCSIRCPSGTWGFG 494
Query: 754 CNVDQDCGEGRQCTSNGCGRVCS----------PVQQEDVGI-CVTECKVDQDCGEGRRC 900
CN+ C G C + C+ P Q G+ C C DC C
Sbjct: 495 CNLTCQCLNGGACNTLDGTCTCAPGWRGAKCEFPCQDGTYGLNCAERC----DCSHADGC 550
Query: 901 --TSNGCGRVCSPVQQKEACEHQCREDR---DCGSGHQCVRKGCGHVCAPVHQVDVGICV 1065
T+ C C P C+ C E R +C C G C+P D GIC
Sbjct: 551 HPTTGHCR--CLPGWSGVHCDSVCAEGRWGPNCSLPCYCKN---GASCSP----DDGIC- 600
Query: 1066 TECKVDQDCGEGRRCASNGCGRVCSPAQQREACEHQC*EDKDCGSGHQCVRKG--CGHV- 1236
+C G R C R+CSP C C QCV C H+
Sbjct: 601 -------ECAPGFR--GTTCQRICSPGFYGHRCSQTC---------PQCVHSSGPCHHIT 642
Query: 1237 ----CSPIPQVGICVTEC---NVDQDCGAGRRCTSNG-------------------CGRV 1338
C P +C C ++C CT+NG C +
Sbjct: 643 GLCDCLPGFTGALCNEVCPSGRFGKNCAGVCTCTNNGTCNPIDRSCQCYPGWIGSDCSQP 702
Query: 1339 CSPPQGGGLCVNRCRGNWDCGAGEECIRKGCGRVCSPAQEPVVGICVDQCQRHW---ECG 1509
C P G C++ C +C G C C+P + C +C + +C
Sbjct: 703 CPPAHWGPNCIHTC----NCHNGAFCSAYDGECKCTPGWTGL--YCTQRCPLGFYGKDCA 756
Query: 1510 PRMRCVS-TGCGHICSPAQDQVEQRPGKC-PVLPKGTIGL-CAEFCS--GDDSCP--SGQ 1668
+C + C HI + C P GT G C + C + +C +G
Sbjct: 757 LICQCQNGADCDHISGQCTCRTGFMGRHCEQKCPAGTYGYGCRQICDCLNNSTCDHITGT 816
Query: 1669 KCCSHGC-GHSCQTA 1710
CS G G C A
Sbjct: 817 CYCSPGWKGARCDQA 831
Score = 50.4 bits (119), Expect = 5e-06
Identities = 85/361 (23%), Positives = 111/361 (30%), Gaps = 61/361 (16%)
Frame = +1
Query: 817 CSPVQQEDVGICVTECKVDQDCGEGRRCTSNGCGRVCSPVQQKEACEHQCREDR---DCG 987
C P E +CV C C GR N C C P C C D C
Sbjct: 94 CCPGFYESRDMCVPHCA--DKCVHGRCIAPNTCQ--CEPGWGGTNCSSACDGDHWGPHCS 149
Query: 988 SGHQCVRKG-CGHVCAPVH------------QVDVGICVTECKVDQDCGEGRRC------ 1110
S QC + C + H + + G +C C G C
Sbjct: 150 SRCQCKNRALCNPITGACHCAAGYRGWRCEDRCEQGTYGNDCHQRCQCQNGATCDHITGE 209
Query: 1111 --ASNG-----CGRVCSPAQQREACEHQC*EDKDCGSGHQC--VRKGC-------GHVCS 1242
S G C +C P + CE +C C +G C V C G VC
Sbjct: 210 CRCSPGYTGAFCEDLCPPGKHGPHCEQRC----PCQNGGVCHHVTGECSCPSGWMGTVCG 265
Query: 1243 -PIPQVGICVTECNVDQDCGAGRRCTSNGCGRVCSPPQGGGLCVNRCR-GNWD--CGAGE 1410
P P+ G C+ + C G C + CSP G C + C G++ C
Sbjct: 266 QPCPE-GRFGKNCSQECQCHNGGTCDAATGQCHCSPGYTGERCQDECPVGSYGVRCAEAC 324
Query: 1411 ECIRKGCGRVCSPAQEPVVGICVDQCQRHW--------ECGPRMRCVSTGCGHICSPAQD 1566
C+ G S G + C+ +C R C H C P
Sbjct: 325 RCVNGGKCYHVSGTCLCEAGFSGELCEARLCPEGLYGIKCDKRCPCHLDNT-HSCHPMSG 383
Query: 1567 QVEQRPGKCPVLPKGTI--GLCAEFCSGDDSCPSGQKC--------CSHGC-GHSCQTAV 1713
+ +PG + T G E C SC +G C C+ G G C T
Sbjct: 384 ECGCKPGWSGLYCNETCSPGFYGEACQQICSCQNGADCDSVTGRCACAPGFKGTDCSTPC 443
Query: 1714 P 1716
P
Sbjct: 444 P 444
>ref|NP_076349.1| keratin-associated protein 5-3 [Mus musculus].
Length = 356
Score = 76.3 bits (186), Expect = 8e-14
Identities = 106/369 (28%), Positives = 122/369 (33%), Gaps = 16/369 (4%)
Frame = +1
Query: 283 GCGHVCAPVHQVDVGICVMECRVDQDCG--EGRLCISNGCGRVCFPVRRREACEHQCRED 456
GCG C V CV C CG +G GCG C+ C
Sbjct: 9 GCGSSCCK----PVCCCVPVCSCSS-CGGCKGGCSSCGGCGSC-------GGCKGGCGSC 56
Query: 457 RDCGSGHQCVRRGCGHV--CAPVHQVDVGICVTECRVDQDCGEGRLCISNGCGRVCFPGR 630
CGS C + GCG C G C C CG C GCG G
Sbjct: 57 GGCGSCGGC-KGGCGSCGGCG-----SCGGCKGGCGSCGGCGSCGGC-KGGCGSCGGCGS 109
Query: 631 REGCEHQCREDRDCGSGHQCVRKGCGHVCAPVHQVGICVTECNVDQDCGEGRQCTSNGCG 810
GC+ C CGS C + GCG C G C C CG C GCG
Sbjct: 110 CGGCKGGCSSCGGCGSCGGC-KGGCGS-CGGCGSCGGCKGGCGSCGGCGSCGGC-KGGCG 166
Query: 811 RVCSPVQQEDVGICVTECKVDQDCG-----EGRRCTSNGCGRVCSPVQQKEACEHQCRED 975
C G C C CG +G C+ GCG C C+ C
Sbjct: 167 S-CGGC--GSCGGCKGGCGSCGGCGSCGGCKGGCCSCGGCGS-CG------GCKGGCSSC 216
Query: 976 RDCGS-----GHQCVRKGCGHVCAPVHQVDVGICVTECKVDQDCGEGRRCASN--GCGRV 1134
CGS G C GCG C G C + C CG + C S+ GCG
Sbjct: 217 GGCGSCGGCKGGCCSCGGCGS-CGGCK----GGC-SSCGGCGTCGGCKGCCSSCGGCGS- 269
Query: 1135 CSPAQQREACEHQC*EDKDCGSGHQCVRKGCGHVCSPIPQVGICVTECNVDQDCGAGRRC 1314
C C+ C CGS C + GCG G C C+ CG+ C
Sbjct: 270 CGGCGSCGGCKGGCGSCGGCGSCGGC-KGGCG-------SCGGCKGGCSSCGGCGSCGCC 321
Query: 1315 TSNGCGRVC 1341
S+ C C
Sbjct: 322 QSSCCKPCC 330
Score = 73.9 bits (180), Expect = 4e-13
Identities = 101/350 (28%), Positives = 110/350 (31%), Gaps = 16/350 (4%)
Frame = +1
Query: 700 GCGHVCAPVHQVGICVTECNVDQDCGEGRQCTS-NGCGRVCSPVQQEDVGICVTECKVDQ 876
GCG C V CV C+ G C+S GCG G C C
Sbjct: 9 GCGSSCCK--PVCCCVPVCSCSSCGGCKGGCSSCGGCG---------SCGGCKGGCGSCG 57
Query: 877 DCGEGRRCTSNGCGRVCSPVQQKEACEHQCREDRDCGSGHQCVRKGCGHV--CAPVHQVD 1050
CG C GCG C C+ C CGS C + GCG C
Sbjct: 58 GCGSCGGC-KGGCGS-CGGCGSCGGCKGGCGSCGGCGSCGGC-KGGCGSCGGCG-----S 109
Query: 1051 VGICVTECKVDQDCGEGRRCASNGCGRVCSPAQQREACEHQC*EDKDCGSGHQCVRKGCG 1230
G C C CG C GCG C C+ C CGS C + GCG
Sbjct: 110 CGGCKGGCSSCGGCGSCGGC-KGGCGS-CGGCGSCGGCKGGCGSCGGCGSCGGC-KGGCG 166
Query: 1231 HVCSPIPQVGICVTECNVDQDCGA-----GRRCTSNGCGRV------CSPPQGGGLCVNR 1377
C G C C CG+ G C+ GCG CS G G C
Sbjct: 167 S-CGGCGSCGGCKGGCGSCGGCGSCGGCKGGCCSCGGCGSCGGCKGGCSSCGGCGSCGGC 225
Query: 1378 CRGNWDCGAGEECIRKGCGRVCSPAQE-PVVGICVDQCQRHWECGPRMRCVST-GCGHIC 1551
G CG C GC CS G C C CG C S GC C
Sbjct: 226 KGGCCSCGGCGSC--GGCKGGCSSCGGCGTCGGCKGCCSSCGGCGSCGGCGSCGGCKGGC 283
Query: 1552 SPAQDQVEQRPGKCPVLPKGTIGLCAEFCSGDDSCPSGQKCCSHGCGHSC 1701
G C G+ G C C C G C GCG SC
Sbjct: 284 GSC--------GGC-----GSCGGCKGGCGSCGGCKGGCSSCG-GCG-SC 318
>ref|NP_001028368.2| NFX1-type zinc finger-containing protein 1 [Mus musculus].
Length = 1909
Score = 74.7 bits (182), Expect = 2e-13
Identities = 85/312 (27%), Positives = 110/312 (35%), Gaps = 21/312 (6%)
Frame = +1
Query: 367 EGRLCISNGCGRVCFPVRRREACEHQCREDRD---CGSGHQCVRRGCGHVCAPVHQVDVG 537
E RL + C R C P E QC + C GH+C C C P QV V
Sbjct: 1286 EFRLACGHVCTRACHPYDSSHK-EFQCMKPCQKVLCQDGHRCPNV-CFQECQPC-QVKVP 1342
Query: 538 ICVTECRVDQ----DCGEGRLCISNGCGRVCFPGRREGCEHQCRED--RDCGSGHQCVRK 699
+ +C Q E C C ++ G R C H C ED R C S V
Sbjct: 1343 KIILKCGHKQMVPCSMSESEFCCQEPCSKILRCGHR--CSHLCGEDCVRLC-SERVTVEL 1399
Query: 700 GCGHV----CAPVHQVGI-----CVTECNVDQDCGEGRQCTSNGC--GRVCSPVQQEDVG 846
CGH C V + C T+C+ DCG + + C GR QQ
Sbjct: 1400 KCGHSQLVKCGNVEDIKYGLPVKCTTKCDTTLDCGHPCPGSCHSCFEGRFHERCQQPCKR 1459
Query: 847 ICVTECKVDQDC-GEGRRCTSNGCGRVCSPVQQKEACEHQCREDRDCGSGHQCVRKGCGH 1023
+ + K + C GE C P Q+ C+++C H +K CG
Sbjct: 1460 LLICSHKCQEPCTGE------------CPPCQR--TCQNRC--------VHSQCKKKCGE 1497
Query: 1024 VCAPVHQVDVGICVTECKVDQDCGEGRRCASNGCGRVCSPAQQREACEHQC*EDKDCGSG 1203
+C+P CV C RC C ++CS R C C K G
Sbjct: 1498 LCSP--------CVEPCV--------WRCQHYQCTKLCSEPCNRPPCYVPC--TKLLACG 1539
Query: 1204 HQCVRKGCGHVC 1239
H C+ CG C
Sbjct: 1540 HPCIGL-CGEPC 1550
Score = 70.1 bits (170), Expect = 6e-12
Identities = 97/376 (25%), Positives = 126/376 (33%), Gaps = 12/376 (3%)
Frame = +1
Query: 637 GCEHQCREDRDCGSGHQCVRKGCGHVCAPVHQVGICVTECNVDQDCGEGRQCTSNGCGRV 816
GC C CG H C R C H H+ C+ C C +G +C N C +
Sbjct: 1280 GCSRPCEFRLACG--HVCTR-AC-HPYDSSHKEFQCMKPCQKVL-CQDGHRCP-NVCFQE 1333
Query: 817 CSPVQQEDVGI---CVTECKVDQDCGEGRRCTSNGCGRVCSPVQQKEACEHQCRED--RD 981
C P Q + I C + V E C C ++ ++ C H C ED R
Sbjct: 1334 CQPCQVKVPKIILKCGHKQMVPCSMSESEFCCQEPCSKI---LRCGHRCSHLCGEDCVRL 1390
Query: 982 CGSGHQCVRKGCGHV----CAPVHQVDVGI---CVTECKVDQDCGEGRRCASNGCGRVCS 1140
C S V CGH C V + G+ C T+C DCG G C
Sbjct: 1391 C-SERVTVELKCGHSQLVKCGNVEDIKYGLPVKCTTKCDTTLDCGH----PCPGSCHSCF 1445
Query: 1141 PAQQREACEHQC*EDKDCGSGHQCVRKGCGHVCSPIPQVGICVTECNVDQDCGAGRRCTS 1320
+ E C+ C C H+C ++ C C P
Sbjct: 1446 EGRFHERCQQPCKRLLICS--HKC-QEPCTGECPP------------------------- 1477
Query: 1321 NGCGRVCSPPQGGGLCVNRCRGNWDCGAGEECIRKGCGRVCSPAQEPVVGICVDQCQRHW 1500
C R C NRC +C +K CG +CSP EP CV +CQ H+
Sbjct: 1478 --CQRTCQ---------NRC-------VHSQC-KKKCGELCSPCVEP----CVWRCQ-HY 1513
Query: 1501 ECGPRMRCVSTGCGHICSPAQDQVEQRPGKCPVLPKGTIGLCAEFCSGDDSCPSGQKCCS 1680
+C + C C+ RP C V P + C C G C
Sbjct: 1514 QC-------TKLCSEPCN--------RP-PCYV-PCTKLLACGHPCIG---------LCG 1547
Query: 1681 HGCGHSCQTAVPDEKT 1728
C C+ PDE T
Sbjct: 1548 EPCPKKCRVCQPDEVT 1563
>ref|NP_001027586.1| platelet endothelial aggregation receptor 1 precursor [Mus musculus].
Length = 1034
Score = 73.2 bits (178), Expect = 7e-13
Identities = 132/523 (25%), Positives = 167/523 (31%), Gaps = 57/523 (10%)
Frame = +1
Query: 223 CEHQCREDRDCGGGHQCVRKGCGHVCAPVHQVDVGICVMEC---RVDQDCGEGRLCISNG 393
C +CR C G C R CAP + D C EC R QDC E C
Sbjct: 270 CTQECR----CHNGGLCDRFTGQCHCAPGYIGDR--CQEECPVGRFGQDCAETCDCAP-- 321
Query: 394 CGRVCFPVRRREACEH-----QCREDRDCGSGHQCVRRGCGHVCAPVHQVDVGICVTECR 558
G CFP CEH +C E R C G + C P H + EC
Sbjct: 322 -GARCFPANGACLCEHGFTGDRCTE-RLCPDGRYGLSCQEPCTCDPEHSLSCHPMHGECS 379
Query: 559 VD-------------QD-----------CGEGRLCISNGCGRVCFPGRR-EGCEHQCRED 663
QD C G LC+++ C PG C + C D
Sbjct: 380 CQPGWAGLHCNESCPQDTHGPGCQEHCLCLHGGLCLADSGLCRCAPGYTGPHCANLCPPD 439
Query: 664 R---DCGSGHQCVRK-GCGHV-----CAPVHQVGICVTECNVDQ---DCGEGRQCTSNGC 807
+C S C C + C Q G C C + +C QC +G
Sbjct: 440 TYGINCSSRCSCENAIACSPIDGTCICKEGWQRGNCSVPCPLGTWGFNCNASCQCAHDG- 498
Query: 808 GRVCSPVQQEDVGICV-------TECKVDQDCGEGRRCTSNGCGRVCSPVQQKEACEH-- 960
VCSP G C C++ C +G+ GC VC + C+
Sbjct: 499 --VCSP----QTGACTCTPGWHGAHCQLP--CPKGQ--FGEGCASVCD-CDHSDGCDPVH 547
Query: 961 -QCREDRDCGSGHQCVRKGCGHVCAPVHQVDVGICVTECKVDQDCGEGRRCASNGCGRVC 1137
QCR C +G R C C G C C G C S VC
Sbjct: 548 GQCR----CQAGWMGTR--CHLPCPE------GFWGANCSNTCTCKNGGTCVSENGNCVC 595
Query: 1138 SPAQQREACEHQC*EDKDCGSGHQCVRKGCGHVCSPI-PQVGICVTECNVDQDCGAGRRC 1314
+P + +C+ C + G +CV+ C + S P G C C AG
Sbjct: 596 APGFRGPSCQRPCPPGR---YGKRCVQCKCNNNHSSCHPSDGTC--------SCLAG--W 642
Query: 1315 TSNGCGRVCSPPQGGGLCVNRCRGNWDCGAGEECIRKGCGRVCSPAQEPVVGICVDQCQR 1494
T C C P G C C+ C G C + +C+P G C
Sbjct: 643 TGPDCSEACPPGHWGLKCSQLCQ----CHHGGTCHPQDGSCICTP------GWTGPNCLE 692
Query: 1495 HWECGPRMRCVSTGCGHICS-PAQDQVEQRPGKCPVLPKGTIG 1620
C PRM C +C + G C V P G G
Sbjct: 693 --GCPPRM--FGVNCSQLCQCDLGEMCHPETGAC-VCPPGHSG 730
>ref|NP_001027585.1| platelet endothelial aggregation receptor 1 precursor [Mus musculus].
Length = 1034
Score = 73.2 bits (178), Expect = 7e-13
Identities = 132/523 (25%), Positives = 167/523 (31%), Gaps = 57/523 (10%)
Frame = +1
Query: 223 CEHQCREDRDCGGGHQCVRKGCGHVCAPVHQVDVGICVMEC---RVDQDCGEGRLCISNG 393
C +CR C G C R CAP + D C EC R QDC E C
Sbjct: 270 CTQECR----CHNGGLCDRFTGQCHCAPGYIGDR--CQEECPVGRFGQDCAETCDCAP-- 321
Query: 394 CGRVCFPVRRREACEH-----QCREDRDCGSGHQCVRRGCGHVCAPVHQVDVGICVTECR 558
G CFP CEH +C E R C G + C P H + EC
Sbjct: 322 -GARCFPANGACLCEHGFTGDRCTE-RLCPDGRYGLSCQEPCTCDPEHSLSCHPMHGECS 379
Query: 559 VD-------------QD-----------CGEGRLCISNGCGRVCFPGRR-EGCEHQCRED 663
QD C G LC+++ C PG C + C D
Sbjct: 380 CQPGWAGLHCNESCPQDTHGPGCQEHCLCLHGGLCLADSGLCRCAPGYTGPHCANLCPPD 439
Query: 664 R---DCGSGHQCVRK-GCGHV-----CAPVHQVGICVTECNVDQ---DCGEGRQCTSNGC 807
+C S C C + C Q G C C + +C QC +G
Sbjct: 440 TYGINCSSRCSCENAIACSPIDGTCICKEGWQRGNCSVPCPLGTWGFNCNASCQCAHDG- 498
Query: 808 GRVCSPVQQEDVGICV-------TECKVDQDCGEGRRCTSNGCGRVCSPVQQKEACEH-- 960
VCSP G C C++ C +G+ GC VC + C+
Sbjct: 499 --VCSP----QTGACTCTPGWHGAHCQLP--CPKGQ--FGEGCASVCD-CDHSDGCDPVH 547
Query: 961 -QCREDRDCGSGHQCVRKGCGHVCAPVHQVDVGICVTECKVDQDCGEGRRCASNGCGRVC 1137
QCR C +G R C C G C C G C S VC
Sbjct: 548 GQCR----CQAGWMGTR--CHLPCPE------GFWGANCSNTCTCKNGGTCVSENGNCVC 595
Query: 1138 SPAQQREACEHQC*EDKDCGSGHQCVRKGCGHVCSPI-PQVGICVTECNVDQDCGAGRRC 1314
+P + +C+ C + G +CV+ C + S P G C C AG
Sbjct: 596 APGFRGPSCQRPCPPGR---YGKRCVQCKCNNNHSSCHPSDGTC--------SCLAG--W 642
Query: 1315 TSNGCGRVCSPPQGGGLCVNRCRGNWDCGAGEECIRKGCGRVCSPAQEPVVGICVDQCQR 1494
T C C P G C C+ C G C + +C+P G C
Sbjct: 643 TGPDCSEACPPGHWGLKCSQLCQ----CHHGGTCHPQDGSCICTP------GWTGPNCLE 692
Query: 1495 HWECGPRMRCVSTGCGHICS-PAQDQVEQRPGKCPVLPKGTIG 1620
C PRM C +C + G C V P G G
Sbjct: 693 --GCPPRM--FGVNCSQLCQCDLGEMCHPETGAC-VCPPGHSG 730
>ref|NP_690012.2| platelet endothelial aggregation receptor 1 precursor [Mus musculus].
Length = 1034
Score = 73.2 bits (178), Expect = 7e-13
Identities = 132/523 (25%), Positives = 167/523 (31%), Gaps = 57/523 (10%)
Frame = +1
Query: 223 CEHQCREDRDCGGGHQCVRKGCGHVCAPVHQVDVGICVMEC---RVDQDCGEGRLCISNG 393
C +CR C G C R CAP + D C EC R QDC E C
Sbjct: 270 CTQECR----CHNGGLCDRFTGQCHCAPGYIGDR--CQEECPVGRFGQDCAETCDCAP-- 321
Query: 394 CGRVCFPVRRREACEH-----QCREDRDCGSGHQCVRRGCGHVCAPVHQVDVGICVTECR 558
G CFP CEH +C E R C G + C P H + EC
Sbjct: 322 -GARCFPANGACLCEHGFTGDRCTE-RLCPDGRYGLSCQEPCTCDPEHSLSCHPMHGECS 379
Query: 559 VD-------------QD-----------CGEGRLCISNGCGRVCFPGRR-EGCEHQCRED 663
QD C G LC+++ C PG C + C D
Sbjct: 380 CQPGWAGLHCNESCPQDTHGPGCQEHCLCLHGGLCLADSGLCRCAPGYTGPHCANLCPPD 439
Query: 664 R---DCGSGHQCVRK-GCGHV-----CAPVHQVGICVTECNVDQ---DCGEGRQCTSNGC 807
+C S C C + C Q G C C + +C QC +G
Sbjct: 440 TYGINCSSRCSCENAIACSPIDGTCICKEGWQRGNCSVPCPLGTWGFNCNASCQCAHDG- 498
Query: 808 GRVCSPVQQEDVGICV-------TECKVDQDCGEGRRCTSNGCGRVCSPVQQKEACEH-- 960
VCSP G C C++ C +G+ GC VC + C+
Sbjct: 499 --VCSP----QTGACTCTPGWHGAHCQLP--CPKGQ--FGEGCASVCD-CDHSDGCDPVH 547
Query: 961 -QCREDRDCGSGHQCVRKGCGHVCAPVHQVDVGICVTECKVDQDCGEGRRCASNGCGRVC 1137
QCR C +G R C C G C C G C S VC
Sbjct: 548 GQCR----CQAGWMGTR--CHLPCPE------GFWGANCSNTCTCKNGGTCVSENGNCVC 595
Query: 1138 SPAQQREACEHQC*EDKDCGSGHQCVRKGCGHVCSPI-PQVGICVTECNVDQDCGAGRRC 1314
+P + +C+ C + G +CV+ C + S P G C C AG
Sbjct: 596 APGFRGPSCQRPCPPGR---YGKRCVQCKCNNNHSSCHPSDGTC--------SCLAG--W 642
Query: 1315 TSNGCGRVCSPPQGGGLCVNRCRGNWDCGAGEECIRKGCGRVCSPAQEPVVGICVDQCQR 1494
T C C P G C C+ C G C + +C+P G C
Sbjct: 643 TGPDCSEACPPGHWGLKCSQLCQ----CHHGGTCHPQDGSCICTP------GWTGPNCLE 692
Query: 1495 HWECGPRMRCVSTGCGHICS-PAQDQVEQRPGKCPVLPKGTIG 1620
C PRM C +C + G C V P G G
Sbjct: 693 --GCPPRM--FGVNCSQLCQCDLGEMCHPETGAC-VCPPGHSG 730
Database: RefSeq49_MP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 15,617,559
Number of sequences in database: 30,036
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 30036
Number of Hits to DB: 81,664,632
Number of extensions: 2931010
Number of successful extensions: 12766
Number of sequences better than 1.0e-05: 82
Number of HSP's gapped: 11274
Number of HSP's successfully gapped: 161
Length of query: 663
Length of database: 15,617,559
Length adjustment: 108
Effective length of query: 555
Effective length of database: 12,373,671
Effective search space: 6867387405
Effective search space used: 6867387405
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ITT01_0011_G11
(1989 letters)
Database: RefSeq49_SP.fasta
24,897 sequences; 11,343,932 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001116676.1| tenascin-X [Sus scrofa]. 102 6e-22
Alignment gi|XP_003356178.1| PREDICTED: multiple epidermal growth factor-... 97 3e-20
Alignment gi|NP_999395.1| tenascin precursor [Sus scrofa]. 87 3e-17
Alignment gi|XP_003126347.2| PREDICTED: prolow-density lipoprotein recept... 84 4e-16
Alignment gi|XP_003129006.2| PREDICTED: NF-X1-type zinc finger protein NF... 77 5e-14
Alignment gi|XP_003128713.1| PREDICTED: latent-transforming growth factor... 75 1e-13
Alignment gi|NP_001186819.1| very low-density lipoprotein receptor [Sus s... 72 9e-13
Alignment gi|XP_001929552.1| PREDICTED: platelet endothelial aggregation ... 71 3e-12
Alignment gi|XP_003354310.1| PREDICTED: multiple epidermal growth factor-... 70 3e-12
Alignment gi|NP_001116619.1| neurogenic locus notch homolog protein 4 [Su... 69 7e-12
>ref|NP_001116676.1| tenascin-X [Sus scrofa].
Length = 4137
Score = 102 bits (255), Expect = 6e-22
Identities = 156/615 (25%), Positives = 203/615 (33%), Gaps = 92/615 (14%)
Frame = +1
Query: 148 DCGAGRRCTSNGCGRVCSPIQQREACEHQCREDRDCGGGHQCVRKGCGHVCAPVHQVD-- 321
DC RC C +C P +C DC G +CV+ C VC D
Sbjct: 183 DCNDQGRCIRGRC--LCFPGYTGPSCSWPSCPG-DCHGRGRCVKGVC--VCRAGFSGDDC 237
Query: 322 -VGICVMECRVDQDCGEGR-LCISNGCGRVCFPVRRREACEHQCREDRDCG--------- 468
+ C C C +GR +C S G C VR +C C + C
Sbjct: 238 SLRSCPRGCSQRGRCEDGRCVCDSGYTGEDC-GVR---SCPRDCSQRGRCQDGRCVCNPG 293
Query: 469 -SGHQCVRRGCGHVCAPVHQVDVGICVTE-------C---RVDQDCGEGRLCISNGCGRV 615
+G C R C C+ + + G CV + C DCGEG C+ C V
Sbjct: 294 YTGEDCGVRSCPRGCSQKGRCEDGRCVCDPGYTGEDCGSRSCPWDCGEGGRCVDGRC--V 351
Query: 616 CFPG------RREGCEHQCREDRDCGSGHQCVRKG-CGHVCAPVHQVGICVTECNVDQDC 774
C+PG C CR C G G G C V C +CN C
Sbjct: 352 CWPGYAGEDCSTRTCPRDCRGRGRCEDGECICNAGYSGDDCG----VRSCPGDCNQRGRC 407
Query: 775 GEGR----------QCTSNGCGRVCSPVQQEDVGICVTECKVD-QDCGEGRRCTSNGCGR 921
+GR C + C R C + + G+CV +DCG R C + GR
Sbjct: 408 EDGRCVCWPGYSGPDCGARACPRDCRGRGRCENGVCVCNAGYSGEDCGV-RSCPGDCLGR 466
Query: 922 --------VCSPVQQ-----KEACEHQCREDRDCG----------SGHQCVRKGCGHVCA 1032
VC P AC CR C +G C C C
Sbjct: 467 GRCENGRCVCWPGYTGRDCGTRACPGDCRGRGRCVDGRCVCNPGFTGEDCGSHRCPGDCR 526
Query: 1033 PVHQVDVGICVTECKVD-QDCG-------------------------EGRRCASNGCGRV 1134
+ + G+C+ + + +DCG EG CA C R
Sbjct: 527 GRGRCEDGVCLCDVGYEGKDCGVRSCPGGCRGRGQCVEGRCVCEDGYEGEDCAIRRCPRD 586
Query: 1135 CSPAQQREACEHQC*EDKDCGSGHQCVRKGCGHVCSPIPQVGICVTECNVDQDCGAGRRC 1314
CS QR C + +G C + C C + G+C V + G C
Sbjct: 587 CS---QRGVCRDGVCTCWEGYAGEDCSLRTCPSNCH---RRGLCEDGRCVCESGYTGPSC 640
Query: 1315 TSNGCGRVCSPPQGGGLCVNRCRGNWDCGAGEECIRKGCGRVCSPAQEPVVGICVDQCQR 1494
+ C C +G G CV +G C AG + CG+ +EP C
Sbjct: 641 ATRTCPADC---RGRGRCV---QGVCLCHAGYS--GEDCGQ-----EEPPASACPG---- 683
Query: 1495 HWECGPRMRCVSTGCGHICSPAQDQVEQRPGKCPVLPKGTIGLCAEFCSGDDSCPSGQKC 1674
CGPR C + C +C VE G P I C E C G C G+
Sbjct: 684 --GCGPRELCRAGQC--VC------VEGFRG-----PDCAIQTCPEDCRGRGECHEGRCV 728
Query: 1675 CSHG-CGHSCQTAVP 1716
C G G C VP
Sbjct: 729 CQDGYAGEDCGEEVP 743
Score = 62.4 bits (150), Expect = 9e-10
Identities = 89/348 (25%), Positives = 114/348 (32%), Gaps = 20/348 (5%)
Frame = +1
Query: 718 APVHQVGICVTECNVDQDCGEGR-QCTSNGCGRVCS----PVQQEDVGICVTECKVDQDC 882
+P C +CN C GR C G CS P G CV V +
Sbjct: 172 SPPSDARSCPDDCNDQGRCIRGRCLCFPGYTGPSCSWPSCPGDCHGRGRCVKGVCVCRAG 231
Query: 883 GEGRRCTSNGCGRVCSPVQQKEACEH-QCREDRDCGSGHQCVRKGCGHVCAPVHQVDVGI 1059
G C+ C R CS Q+ CE +C C SG+ + CG P
Sbjct: 232 FSGDDCSLRSCPRGCS---QRGRCEDGRCV----CDSGY--TGEDCGVRSCP-------- 274
Query: 1060 CVTECKVDQDCGEGRRCASNGCGRVCSPAQQREACE-HQC*EDKDCGSGHQCVRKGCGHV 1236
+DC + RC C VC+P E C C + C +C C V
Sbjct: 275 --------RDCSQRGRCQDGRC--VCNPGYTGEDCGVRSC--PRGCSQKGRCEDGRC--V 320
Query: 1237 CSPIPQVGICVTEC---NVDQDCGAGRRCTSNGCGRVCSPPQGGGLCVNRCRGNWDCGAG 1407
C P G +C + DCG G RC C VC W AG
Sbjct: 321 CDP----GYTGEDCGSRSCPWDCGEGGRCVDGRC--VC----------------WPGYAG 358
Query: 1408 EECIRKGCGRVCSPAQEPVVGICV-------DQC---QRHWECGPRMRCVSTGCGHICSP 1557
E+C + C R C G C+ D C +C R RC C +C P
Sbjct: 359 EDCSTRTCPRDCRGRGRCEDGECICNAGYSGDDCGVRSCPGDCNQRGRCEDGRC--VCWP 416
Query: 1558 AQDQVEQRPGKCPVLPKGTIGLCAEFCSGDDSCPSGQKCCSHGCGHSC 1701
+ CP +G G C ++ SG+ C C C
Sbjct: 417 GYSGPDCGARACPRDCRGR-GRCENGVCVCNAGYSGEDCGVRSCPGDC 463
>ref|XP_003356178.1| PREDICTED: multiple epidermal growth factor-like domains protein
6-like [Sus scrofa].
Length = 1982
Score = 97.4 bits (241), Expect = 3e-20
Identities = 158/647 (24%), Positives = 213/647 (32%), Gaps = 112/647 (17%)
Frame = +1
Query: 100 QAVDVGICVTECKVDQDCGAGRRCTSNGCGRVCSPIQQREACEHQCREDRDCGGGHQCVR 279
+A G +C +C AG C + +C P +Q C C GH C +
Sbjct: 1344 RACPAGFFGVDCHHACNCSAGASCDAVSGSCLCPPGRQGPRCSQTCPAHT---YGHNCSQ 1400
Query: 280 K-GC--GHVCAPVH-QVDVG------ICVMECRV---DQDCGEGRLCISNG--------- 393
C G C PVH Q G C+ C +C LC + G
Sbjct: 1401 VCSCSNGASCDPVHGQCRCGPGWTGPACLQACPAGLYGDNCQHSCLCQNGGTCDPVSGHC 1460
Query: 394 ----------CGRVCFPVRRREACEHQCREDRDCGSGHQCVRRGCGHVCAPVHQVDVGIC 543
C + C P +C+H CR C +G C R GH C + C
Sbjct: 1461 SCPEGWAGLACEKECLPGLFGASCQHSCR----CLNGGLCDPR-TGH-CLCLAGWTGDEC 1514
Query: 544 VTEC-------RVDQDCG----------EGRLC----ISNGCGRVCFPG-RREGCEHQCR 657
+ C R D+ C G LC + C C PG EGC C+
Sbjct: 1515 QSPCAEGTFGVRCDEPCACRWEAAATRQRGLLCPPGWRARMCPTACPPGWFGEGCAQHCQ 1574
Query: 658 EDRDCGSGHQCVRKGCGHVCAPVHQVGICVTEC---NVDQDCGEGRQCTSNGCGRVCSPV 828
C G C C P C C + CG+ QC G + C P
Sbjct: 1575 ----CPPGAACHHVSGECHCPPGFTGPGCEQACPPGTFGESCGQKCQCP--GENQACHPA 1628
Query: 829 QQEDVGICVTECKVDQDCGEGRRCTSNGCGRVCSPVQQKEACEHQCREDRDCGSGHQC-- 1002
G CV C G +GC + C P + CE C C +G C
Sbjct: 1629 S----GACV--------CAAGYH--GSGCRQRCPPGRFGPGCEQLCA----CLNGGSCDP 1670
Query: 1003 -----------VRKGCGHVCAPVHQVDVGICVTECKVDQDCGEGRRCASNGCGRVCSPAQ 1149
+ CG C P + +G C C+ CG+G C C P +
Sbjct: 1671 ATGACRCPAGFLGTDCGLAC-PHGRFGLG-CAHVCR----CGQGAACDPVTGTCTCPPGR 1724
Query: 1150 QREACEHQC*EDK---DCGSGHQCVRKGCGHVCSPIPQVGICVTECNVDQDCGAGR---- 1308
CEH C +++ +C C G H + G+ T + + C AGR
Sbjct: 1725 TGVHCEHGCPQNRFGVNCEGTCSCRNGGLCHATNGSCSCGLGWTGPHCELACPAGRYGAA 1784
Query: 1309 -----RCTSNGC---------------GRVCSPPQGGGLCVNRCRGNWDCGAGEEC--IR 1422
C + G G+ C P G CRG +C G C +
Sbjct: 1785 CHLECSCRNQGTCEPASGACHCGPGFYGQACEHPCPSGFHGAGCRGTCECQHGAPCDPVS 1844
Query: 1423 KGC-------GRVCSPAQEPVVGICVDQCQRHWECGPRMRCVSTGCGHICSPAQDQVEQR 1581
C G+ C EP G + C++ +CG + C S G +C P +
Sbjct: 1845 GRCLCPAGFHGKFCERGCEP--GSFGEGCRQRCDCGDGVPCDSVTGGCLCPPGRTGTTCD 1902
Query: 1582 PGKCPVLPKGTIGL-CAEFCS---GDDSCP-SGQKCCSHG-CGHSCQ 1704
G +G G CA CS G D P SGQ C G G +C+
Sbjct: 1903 LG----CRRGFFGPGCALRCSCGGGADCDPVSGQCLCVDGYTGPTCR 1945
Score = 80.1 bits (196), Expect = 4e-15
Identities = 132/537 (24%), Positives = 172/537 (32%), Gaps = 69/537 (12%)
Frame = +1
Query: 139 VDQDCGAGRRCTSNGCGRVCSPIQQREACEHQCREDR----DCGGGH-QCVRKGCGHVC- 300
V C C + C P +C+H CR D GH C+ G C
Sbjct: 1456 VSGHCSCPEGWAGLACEKECLPGLFGASCQHSCRCLNGGLCDPRTGHCLCLAGWTGDECQ 1515
Query: 301 APVHQVDVGICVMECRVDQDCG-EGRLCISNGCGRVCFPVRRREACEHQCRED---RDCG 468
+P + G+ R D+ C + G +C P R C C C
Sbjct: 1516 SPCAEGTFGV-----RCDEPCACRWEAAATRQRGLLCPPGWRARMCPTACPPGWFGEGCA 1570
Query: 469 SGHQCVR-RGCGHVCAPVHQVDVGICVTECRVDQDCGEGRLCISNGCGRVC-FPGRREGC 642
QC C HV H G C +Q C G CG+ C PG + C
Sbjct: 1571 QHCQCPPGAACHHVSGECH-CPPGFTGPGC--EQACPPGTF--GESCGQKCQCPGENQAC 1625
Query: 643 EHQCREDRDCGSGHQCVRKGCGHVCAP------VHQVGICVTECNVDQDCGEGRQCTSN- 801
H C +G+ GC C P Q+ C+ + D G R C +
Sbjct: 1626 -HPASGACVCAAGYH--GSGCRQRCPPGRFGPGCEQLCACLNGGSCDPATGACR-CPAGF 1681
Query: 802 ---GCGRVCSPVQQEDVGICVTECKVDQDCGEGRRCTSNGCGRVCSPVQQKEACEHQCRE 972
CG C P + +G C C+ CG+G C C P + CEH C +
Sbjct: 1682 LGTDCGLAC-PHGRFGLG-CAHVCR----CGQGAACDPVTGTCTCPPGRTGVHCEHGCPQ 1735
Query: 973 DR---DCGSGHQCVRKGCGHVCAPVHQVDVGICVTECKVDQDCGE-GRRC---------- 1110
+R +C C G H +G C++ G G C
Sbjct: 1736 NRFGVNCEGTCSCRNGGLCHATNGSCSCGLGWTGPHCELACPAGRYGAACHLECSCRNQG 1795
Query: 1111 ----ASNGCGRVCSPAQQREACEHQC*EDK---------DCGSGHQC--VRKGC------ 1227
AS C C P +ACEH C +C G C V C
Sbjct: 1796 TCEPASGACH--CGPGFYGQACEHPCPSGFHGAGCRGTCECQHGAPCDPVSGRCLCPAGF 1853
Query: 1228 -GHVCSPIPQVGICVTECNVDQDCGAGRRCTSNGCGRVCSPPQGGGLCVNRCRGNW---- 1392
G C + G C DCG G C S G +C P + G C CR +
Sbjct: 1854 HGKFCERGCEPGSFGEGCRQRCDCGDGVPCDSVTGGCLCPPGRTGTTCDLGCRRGFFGPG 1913
Query: 1393 -----DCGAGEECIRKGCGRVCSPAQEPVVG--ICVDQCQRHWECGPRMRCVSTGCG 1542
CG G +C +PV G +CVD GP R +GCG
Sbjct: 1914 CALRCSCGGGADC-------------DPVSGQCLCVD-----GYTGPTCRQGESGCG 1952
Score = 67.8 bits (164), Expect = 2e-11
Identities = 154/657 (23%), Positives = 204/657 (31%), Gaps = 129/657 (19%)
Frame = +1
Query: 121 CVTECKVDQDCGAGRRCTSNGCGRVCSPIQQREA-CEHQCREDR-----DCGGGHQCVRK 282
C E ++ +D G+RC +P R A C H CR R +C G+ R
Sbjct: 711 CRPEFQLQED---GKRCVRR------NPCTDRNAGCMHTCRLLRGRAHCECHAGY---RL 758
Query: 283 GCGH-VCAPVHQVDVGI--CVMECRVDQDCGEGRLCISNGC------GRVCFPVRRREAC 435
H C V + G+ C C Q + C+ N GR C+ +
Sbjct: 759 AADHKACEDVDECATGLAQCAHSCLNTQGSFK---CVCNAGYELGADGRQCYRIEMEIV- 814
Query: 436 EHQCREDRDCGSGHQCVRRGCGHVCAPVHQVDVGICVTECRVDQDCGEGRLC---ISNGC 606
+ C E + G H C G +C H ++G C DC + C +N
Sbjct: 815 -NSC-EAANGGCSHGCSHSSEGPICTCPHGYELGEDQKTCIDVDDCADSPCCQQVCTNSP 872
Query: 607 GRV---CFPGRR---EGCEHQCREDRDCGSGHQCVRKGCGHVCAPVHQVGICVTECNVDQ 768
G C+ G R +GC C + +C SGH GC H C + G C V
Sbjct: 873 GGYECSCYAGYRLSTDGC--GCEDVDECASGH----GGCEHHC--TNLAGSFQCSCEVGY 924
Query: 769 DCGEGRQCTS---------NGCGRVCSPV--------------------QQEDVGICVTE 861
E R+ S +G + P+ +ED + E
Sbjct: 925 RLDEDRRGCSHLEMTEVGLDGHLPLVRPLPHVAVLQDELPHLFRDDYVGAEEDEEVEEAE 984
Query: 862 CKVDQDCGEGRRCTSNGCGRVCSPVQQKEACEHQCREDRDCG---SGHQCVRKGCGHVCA 1032
+ + E C + G+ CS C+ CR C G C G +C
Sbjct: 985 ARGEHTLEEKFVCLDDSFGQDCS-----LTCD-DCRNGGTCRPSLDGCDCPEGWTGLLCN 1038
Query: 1033 PVHQVDVGICVTECKVDQDCGEGRRC--ASNGCGRVCSPAQQREACEHQC*E---DKDCG 1197
D C C G C A+ C C P CE C + K C
Sbjct: 1039 ETCPPD--SFGKNCSFPCSCQNGGTCDPATGACR--CPPGVSGAHCEDGCPKGFYGKQCR 1094
Query: 1198 SGHQCVRKG-------------------CGHVCSPIPQVGICVTECNVDQD--------- 1293
C +G C C P C EC ++
Sbjct: 1095 KKCHCANRGRCHRLYGACLCDPGLYGRFCHLACPPWAFGPGCSEECQCERQNTRACDKKD 1154
Query: 1294 ----CGA---GRRCTSN--------GCGRVCSPPQG------GGLCVNRCRGNW---DCG 1401
C A G RC GC + C+ P G G C C + DC
Sbjct: 1155 GTCACKAGFGGERCQDECRLGFFGPGCLQTCTCPPGVACDPISGECGKECPAGYRGKDC- 1213
Query: 1402 AGEECIRKGCGRVCSPA-------QEPVVGICV-------DQCQRHWECGPRMRCVSTGC 1539
G+EC G CS + +PV G C+ D C EC P R GC
Sbjct: 1214 -GQECPAGTFGLNCSGSCSCRGAPCDPVTGQCLCPPGRTGDDCGA--EC-PEGRW-GLGC 1268
Query: 1540 GHICSPAQD--QVEQRPGKCPVLPKGTIGLCAEFCSGDDSCPSGQKCCSHGCGHSCQ 1704
IC + E G C P T C D CP G GCG CQ
Sbjct: 1269 QEICPACEHGATCEPETGACLCRPGFTGSRC------QDGCPQGH--YGPGCGQQCQ 1317
Score = 67.8 bits (164), Expect = 2e-11
Identities = 124/516 (24%), Positives = 165/516 (31%), Gaps = 67/516 (12%)
Frame = +1
Query: 358 DCGEGRLCISNGCGRVCFPVRRREACEHQCREDRDCGSGHQCVRRGCGHVCAP----VHQ 525
DC EG + C C P + C C C +G C C P H
Sbjct: 1027 DCPEGWTGLL--CNETCPPDSFGKNCSFPC----SCQNGGTCDPATGACRCPPGVSGAHC 1080
Query: 526 VD---VGICVTECRVDQDCGE-GR--------LCISNGCGRVCF---------PGRREGC 642
D G +CR C GR LC GR C PG E C
Sbjct: 1081 EDGCPKGFYGKQCRKKCHCANRGRCHRLYGACLCDPGLYGRFCHLACPPWAFGPGCSEEC 1140
Query: 643 EHQCREDRDCGSGH---QCVRKGCGHVCAPVHQVGICVTECNVDQDCGEGRQCT--SNGC 807
+ + + R C C G C ++G C C G C S C
Sbjct: 1141 QCERQNTRACDKKDGTCACKAGFGGERCQDECRLGFFGPGCLQTCTCPPGVACDPISGEC 1200
Query: 808 GRVC-SPVQQEDVGICVTECKVDQ---DCGEGRRCTSNGCGRV-----CSPVQQKEACEH 960
G+ C + + +D C EC +C C C V C P + + C
Sbjct: 1201 GKECPAGYRGKD---CGQECPAGTFGLNCSGSCSCRGAPCDPVTGQCLCPPGRTGDDCGA 1257
Query: 961 QCREDRDCGSGHQCVRKGCGH--VCAPVHQVDVGICV-----TECKVDQDCGEGRRCASN 1119
+C E R G G Q + C H C P + G C+ T + C +G
Sbjct: 1258 ECPEGR-WGLGCQEICPACEHGATCEP----ETGACLCRPGFTGSRCQDGCPQGHY--GP 1310
Query: 1120 GCGRVCSPAQQREACEHQC*EDKDCGSGHQCVRKGCGHVCSPIPQVGICVTECNVDQDCG 1299
GCG+ C + AC+H C G C G +C+ +C
Sbjct: 1311 GCGQQCQ-CEHGAACDH-------VSGACTCPAGWRGTFCERACPAGFFGVDCHHACNCS 1362
Query: 1300 AGRRCTSNGCGRVCSPPQGGGLCVNRCRGNWDCGAGEECIRKGCGRVCSPAQ----EPVV 1467
AG C + +C P + G C C + C +VCS + +PV
Sbjct: 1363 AGASCDAVSGSCLCPPGRQGPRCSQTCPAH--------TYGHNCSQVCSCSNGASCDPVH 1414
Query: 1468 GICVDQCQRHWECGPRMRCVSTG-----CGHICSPAQDQVEQRPGKC-PVLPKGTIGLCA 1629
G C +C W ++ G C H C + Q G C PV
Sbjct: 1415 GQC--RCGPGWTGPACLQACPAGLYGDNCQHSC------LCQNGGTCDPV---------- 1456
Query: 1630 EFCSGDDSCPSG------QKCCSHG-----CGHSCQ 1704
SG SCP G +K C G C HSC+
Sbjct: 1457 ---SGHCSCPEGWAGLACEKECLPGLFGASCQHSCR 1489
>ref|NP_999395.1| tenascin precursor [Sus scrofa].
Length = 1746
Score = 87.4 bits (215), Expect = 3e-17
Identities = 148/542 (27%), Positives = 188/542 (34%), Gaps = 20/542 (3%)
Frame = +1
Query: 151 CGAGRRCTSNGCGRVCSPIQQREAC-EHQCREDRDCGGGHQCVRKGCGHVCAPVHQVDVG 327
C ++ GCG VC P + C E +C +C QCV C VC ++ G
Sbjct: 161 CSGRGNFSTEGCGCVCEPGWKGPNCSEPEC--PSNCHLRGQCVDGQC--VC---NEGFTG 213
Query: 328 ICVMECRVDQDCGEGRLCISNGCGRVCFPVRRREACEHQCREDRDCGSGHQCVRRGCGHV 507
+ DC + C++ C VCF + SG C R C
Sbjct: 214 EDCSQLACPSDCNDQGKCVNGVC--VCF----------------EGYSGVDCSRETCPVP 255
Query: 508 CAPVHQVDV-GICV-TECRVDQDCGEGRLCISNGCGRVCFPGRREGCEHQCREDRDCGSG 681
C+ H V G CV E +DC E LC+ N GR GR C E+ +C
Sbjct: 256 CSEEHGRCVDGRCVCQEGFAGEDCNE-PLCLHNCHGR----GR-------CVEN-ECVCD 302
Query: 682 HQCVRKGCGHVCAP--VHQVGICVTECNVDQDCGEGRQCTSNGCGRVCSPVQQEDVGICV 855
+ CG + P G C+ + EG C C C + + G CV
Sbjct: 303 EGFTGEDCGELICPKDCFDRGRCINGTCYCDEGFEGEDCGRLACPHGCRGRGRCEEGQCV 362
Query: 856 -TECKVDQDCGEGRRCTSNGCGRVCSPVQQKEACEHQCREDRDCGSGHQCVRKGCGHVCA 1032
E DC E RRC S+ R + +C D D G C C C+
Sbjct: 363 CDEGFAGADCSE-RRCPSDCHNR-------GRCLDGRCECD-DGFEGEDCGELRCPGGCS 413
Query: 1033 PVHQVDVGICV-TECKVDQDCGEGRRCASNGCGRVCSPAQQREACEHQC*EDKDCGSGHQ 1209
+ G CV E + +DC + R N C Q R CEH G+
Sbjct: 414 GHGRCVNGQCVCDEGRTGEDCSQLR--CPNDCHGRGRCVQGRCECEHGF-------QGYD 464
Query: 1210 CVRKGCGHVCSPIPQVGICVTECNVDQDCGAGRRCTSNGCGRVCSPPQGGGLCVNRCRGN 1389
C C H C Q G CV V D G C C CS G CV+ G
Sbjct: 465 CSEMSCPHDCH---QHGRCVNGMCVCDDGYTGEDCRELRCPGDCSQ---RGRCVD---GR 515
Query: 1390 WDCG---AGEECIRKGCGRVCSPAQEPVVGICVDQCQRHW---ECGPRMRCVSTGCGHIC 1551
C AG +C C C V G CV C + +CG R RC G
Sbjct: 516 CVCEHGFAGPDCADLACPSDCHGRGRCVNGQCV--CHEGFTGKDCGQR-RCPGDCHG--- 569
Query: 1552 SPAQDQVEQRPGKCPVLPKGTIGL------CAEFCSGDDSCPSGQKCCSHG-CGHSCQTA 1710
Q G+C V +G GL C CS C SG+ C+ G G C
Sbjct: 570 -----QGRCVDGQC-VCHEGFTGLDCGQRSCPNDCSNWGQCVSGRCICNEGYSGEDCSQV 623
Query: 1711 VP 1716
P
Sbjct: 624 SP 625
Score = 76.6 bits (187), Expect = 5e-14
Identities = 100/369 (27%), Positives = 129/369 (34%), Gaps = 20/369 (5%)
Frame = +1
Query: 118 ICVTECK-----VDQDCGAGRRCTSNGCGRVCSPIQ--QREACEHQCREDRDCGGGHQCV 276
+C+ C V+ +C T CG + P R C + + G C
Sbjct: 283 LCLHNCHGRGRCVENECVCDEGFTGEDCGELICPKDCFDRGRCINGTCYCDEGFEGEDCG 342
Query: 277 RKGCGHVCAPVHQVDVGICVM-ECRVDQDCGEGRLCISNGCGRVCFPVRRREACEHQCRE 453
R C H C + + G CV E DC E R C C R + +C
Sbjct: 343 RLACPHGCRGRGRCEEGQCVCDEGFAGADCSERR------CPSDCH--NRGRCLDGRCEC 394
Query: 454 DRDCGSGHQCVRRGCGHVCAPVHQVDVGICV-TECRVDQDCGEGRLCISNGCGR-VCFPG 627
D D G C C C+ + G CV E R +DC + R C ++ GR C G
Sbjct: 395 D-DGFEGEDCGELRCPGGCSGHGRCVNGQCVCDEGRTGEDCSQLR-CPNDCHGRGRCVQG 452
Query: 628 RREGCEHQCREDRDCGSGHQCVRKGCGHVCAPVHQVGICVTECNVDQDCGEGRQCTSNGC 807
R E CEH + G+ C C H C HQ G CV V D G C C
Sbjct: 453 RCE-CEHGFQ-------GYDCSEMSCPHDC---HQHGRCVNGMCVCDDGYTGEDCRELRC 501
Query: 808 GRVCSPVQQEDVGICVTE----------CKVDQDCGEGRRCTSNGCGRVCSPVQQKEACE 957
CS + G CV E DC RC + C VC + C
Sbjct: 502 PGDCSQRGRCVDGRCVCEHGFAGPDCADLACPSDCHGRGRCVNGQC--VCHEGFTGKDC- 558
Query: 958 HQCREDRDCGSGHQCVRKGCGHVCAPVHQVDVGICVTECKVDQDCGEGRRCASNGCGRVC 1137
Q R DC +CV C VC H+ G+ + DC +C S C +C
Sbjct: 559 GQRRCPGDCHGQGRCVDGQC--VC---HEGFTGLDCGQRSCPNDCSNWGQCVSGRC--IC 611
Query: 1138 SPAQQREAC 1164
+ E C
Sbjct: 612 NEGYSGEDC 620
>ref|XP_003126347.2| PREDICTED: prolow-density lipoprotein receptor-related protein 1-like
[Sus scrofa].
Length = 1598
Score = 83.6 bits (205), Expect = 4e-16
Identities = 138/577 (23%), Positives = 197/577 (34%), Gaps = 82/577 (14%)
Frame = +1
Query: 205 IQQREACEHQCREDRDCGGGHQCVRKGCGHVCAPVHQVDVGICVMECRVDQDCGEGRLCI 384
++Q + H C+ + + G GH CA +G G+GR C+
Sbjct: 338 LRQPDVPNHPCKVNNGGCSNLCLLSPGGGHKCACPTNFYLG------------GDGRNCV 385
Query: 385 SNGCGRVCFPVRRREACEH--QCREDRDCGSGHQCVRRGCGHV-CAPVH-QVDVGICVTE 552
SN C F + + +C + DCG H C C P Q GIC
Sbjct: 386 SN-CTASQFVCKNDKCIPFWWKCDTEDDCGD-HSDEPPDCPEFKCRPGQFQCSTGICTNP 443
Query: 553 ---CRVDQDCGEGRLCISNGCGRVCFPGRREGCEH---------QCREDRDCGSGHQCVR 696
C D DC + +N VC P + + C + +C +CG G
Sbjct: 444 AFICDGDNDCQDNS-DEANCDIHVCLPSQFK-CTNTNRCIPGIFRCNGQDNCGDGED--E 499
Query: 697 KGCGHVCAPVHQVGICVTE--------CNVDQDCGEGRQ----CTSNGCGRVCSPVQQED 840
+ C V +Q +T+ C+ D DC +G CT CG + +D
Sbjct: 500 RDCPEVTCAPNQFQCSITKRCIPRVWVCDRDNDCVDGSDEPANCTQMTCG--VDEFRCKD 557
Query: 841 VGICVT---ECKVDQDCGEGRRCTSNGCG-RVCSPVQ---QKEAC---EHQCREDRDCGS 990
G C+ +C + DCG+G C R C P Q + C QC D DCG
Sbjct: 558 SGRCIPARWKCDGEDDCGDGSDEPKEECDERTCEPYQFRCKNNRCVPGRWQCDYDNDCGD 617
Query: 991 G---HQCVRKGCGHV---CAPVHQVDVGICVT---ECKVDQDCGEGRRCASNGCGRVCSP 1143
C + C CA G C+ +C D DC +G C C
Sbjct: 618 NSDEESCTPRPCSESEFSCAN------GRCIAGRWKCDGDHDCADGSD--EKDCTPRCDM 669
Query: 1144 AQQREACEH------QC*EDKDC--GSGHQCVRKG----------CGH-VCSPIPQVGIC 1266
Q + H +C D DC GS + G C + +C P+
Sbjct: 670 DQFQCKSGHCIPLRWRCDADADCMDGSDEEACSTGVRTCPLDEFQCNNTLCKPL------ 723
Query: 1267 VTECNVDQDCGAGRRCTSNGCGRVCSPPQGGGLCVN---------RCRGNWDCGAGEECI 1419
+C+ + DCG C R PP C N +C G +CG G +
Sbjct: 724 AWKCDGEDDCGDNSDENPEECARFVCPPNRPFRCKNDRVCLWIGRQCDGTDNCGDGTD-- 781
Query: 1420 RKGCGRVCSP--AQEPVVGICVDQCQRHWECGPRMRCVSTG--CGHI--CSPAQDQVEQR 1581
C P AQ P C D ++ + C RC+S+ C C D+ +
Sbjct: 782 ----EEDCEPPTAQSP---HCKD--KKEFLC-RNQRCLSSSLRCNMFDDCGDGSDEED-- 829
Query: 1582 PGKCPVLPKGT-IGLCAEFCSGDDSCPSGQKCCSHGC 1689
C + PK T A C + C +K C
Sbjct: 830 ---CSIDPKLTSCATNASICGDEARCVRTEKAAYCAC 863
>ref|XP_003129006.2| PREDICTED: NF-X1-type zinc finger protein NFXL1 [Sus scrofa].
Length = 911
Score = 76.6 bits (187), Expect = 5e-14
Identities = 119/512 (23%), Positives = 163/512 (31%), Gaps = 88/512 (17%)
Frame = +1
Query: 430 ACEHQCREDRDCGSGHQCVRRGCGHVCAPVHQVDVGIC-------------VTECRVDQD 570
+C C D GH+C+ C P ++ C E
Sbjct: 252 SCGQVCERDFKPPCGHKCLLLCHPGPCPPCPKMVTTTCYCKKAKPIPRRCSAKEWSCQLP 311
Query: 571 CGEGRLCISNGCGRVCFPGRREGCEHQCREDRDCGSGHQCVRKGCGHVCAPVHQVGICVT 750
CG LC + C C G C R+ C G Q + C +P+
Sbjct: 312 CGRKLLCGQHKCENPCHAGSCPPCPRVSRQ--KCVCGKQVAERSC---ASPL-------- 358
Query: 751 ECNVDQDCGEGRQCTSNGCGRVC---------------SPVQQ--------EDVGICVTE 861
+ DQ CG+ C ++ C +VC P Q+ EDV C
Sbjct: 359 -WHCDQVCGKTLSCRNHTCEQVCHVGACGDCPRSGKRFCPCQKSKFSLPCTEDVPTCGDS 417
Query: 862 CKVDQDCGEGR---RCTSNGCGRVC----------------SPVQQKEACEHQCREDRDC 984
C +CG R RC C C P + CE +C + RDC
Sbjct: 418 CDKVLECGIHRCSQRCHRGPC-ETCRQEVEKHCRCGKHTKRMPCHKPYLCETKCVKMRDC 476
Query: 985 GSGHQCVRKGCGHVCAPVHQVDVGICVTECKVDQDCGEGRRCASNGCGRVCSPAQQREAC 1164
HQC RK C C P DQ+CG C ++ C VC R +C
Sbjct: 477 -QKHQCRRKCCPGNCPP--------------CDQNCGRTLGCRNHKCPSVC----HRGSC 517
Query: 1165 EHQC*E--DKDCGSGHQCVRKGCGHVCSPIPQVGICVTECNVDQDCGAG----RRCTSNG 1326
+ C E D C G+ V CG + P C +C+ C RC
Sbjct: 518 -YPCPETVDVKCSCGNTKVTVPCGRERTTRPPK--CKEQCSRPPTCHHASQEKHRCHFGS 574
Query: 1327 CGRVCSPPQG-----GGLCVNRCR--------------GNWDCGAGEECIRKGCGRVCSP 1449
C P Q G LC C G W+ + I+ C P
Sbjct: 575 CPPCHQPCQKVLEKCGHLCPAPCHDQALVKQTGKHQPTGPWEQPSEPAFIQTAL--PCPP 632
Query: 1450 AQEPVVGICVDQCQRHWECGPRMRCVSTG---CGHICSPAQD-QVEQRPGKCPVLPKGTI 1617
Q P+ C+ + E P + C + G C +C D Q +C + + I
Sbjct: 633 CQVPIPMECLGK----HEVSP-LPCHAVGPYSCTRVCGRTLDCQNHTCMKECHQVTE--I 685
Query: 1618 GLCAEFCSGDDSCPSGQKCCSH----GCGHSC 1701
G C + C ++ CS GC H C
Sbjct: 686 GSCTDKNKAGPECLQCEEGCSKSRPPGCPHPC 717
Score = 72.0 bits (175), Expect = 1e-12
Identities = 105/446 (23%), Positives = 144/446 (32%), Gaps = 55/446 (12%)
Frame = +1
Query: 109 DVGICVTECKVDQDCGAGR---RCTSNGCGRVCS----------------PIQQREACEH 231
DV C C +CG R RC C C P + CE
Sbjct: 410 DVPTCGDSCDKVLECGIHRCSQRCHRGPC-ETCRQEVEKHCRCGKHTKRMPCHKPYLCET 468
Query: 232 QCREDRDCGGGHQCVRKGCGHVCAPVHQVDVGICVMECRVDQDCGEGRLCISNGCGRVCF 411
+C + RDC HQC RK C C P DQ+CG C ++ C VC
Sbjct: 469 KCVKMRDCQK-HQCRRKCCPGNCPPC--------------DQNCGRTLGCRNHKCPSVC- 512
Query: 412 PVRRREACEHQCREDRDCGSGHQCVRRGCGHVCAPVHQVDVGICVTECRVDQDCGEGRLC 591
R +C + C E D V+ CG+ +V CG R
Sbjct: 513 ---HRGSC-YPCPETVD-------VKCSCGNT----------------KVTVPCGRERTT 545
Query: 592 ISNGCGRVCFPGRREGCEHQCREDRDCGSGH--------QCVRKGCGHVC-APVHQVGIC 744
C C R C H +E C G Q V + CGH+C AP H +
Sbjct: 546 RPPKCKEQC--SRPPTCHHASQEKHRCHFGSCPPCHQPCQKVLEKCGHLCPAPCHDQAL- 602
Query: 745 VTECNVDQDCGEGRQC-------TSNGCGRVCSPVQQEDVGI---------CVTECKVDQ 876
V + Q G Q T+ C P+ E +G V +
Sbjct: 603 VKQTGKHQPTGPWEQPSEPAFIQTALPCPPCQVPIPMECLGKHEVSPLPCHAVGPYSCTR 662
Query: 877 DCGEGRRCTSNGCGRVCSPVQQKEACEHQCREDRDCGSGHQCVRK----GCGHVCA-PVH 1041
CG C ++ C + C V + +C + + +C + K GC H C P H
Sbjct: 663 VCGRTLDCQNHTCMKECHQVTEIGSCTDKNKAGPECLQCEEGCSKSRPPGCPHPCVLPCH 722
Query: 1042 QVDVGICVT------ECKVDQDCGEGRRCASNGCGRVCSPAQQREACEHQC*EDKDCGSG 1203
+ CV CK+ E R+ + C++QC ++ CG
Sbjct: 723 PGECPPCVQMLRIKCHCKITSLYVECRKMTTADINE----KNLLSCCKNQCPKELPCG-- 776
Query: 1204 HQCVRKGCGHVCSPIPQVGICVTECN 1281
H C + G C CN
Sbjct: 777 ---------HRCKEMCHPGECPFNCN 793
Score = 63.5 bits (153), Expect = 4e-10
Identities = 92/378 (24%), Positives = 125/378 (33%), Gaps = 43/378 (11%)
Frame = +1
Query: 592 ISNGCGRVCFPGRREGCEHQCR---EDRDCGSGHQCVRKGCGHVCAPVHQVGICVTECNV 762
+ + CG+VC + C H+C C + V C A E +
Sbjct: 249 VPHSCGQVCERDFKPPCGHKCLLLCHPGPCPPCPKMVTTTCYCKKAKPIPRRCSAKEWSC 308
Query: 763 DQDCGEGRQCTSNGC-----GRVCSPVQQEDVGICVTECKV------------DQDCGEG 891
CG C + C C P + CV +V DQ CG+
Sbjct: 309 QLPCGRKLLCGQHKCENPCHAGSCPPCPRVSRQKCVCGKQVAERSCASPLWHCDQVCGKT 368
Query: 892 RRCTSNGCGRVC-------SPVQQKEACEHQ-------CRED-RDCGSGHQCVRKGCG-H 1023
C ++ C +VC P K C Q C ED CG V + CG H
Sbjct: 369 LSCRNHTCEQVCHVGACGDCPRSGKRFCPCQKSKFSLPCTEDVPTCGDSCDKVLE-CGIH 427
Query: 1024 VCAP-VHQVDVGICVTECKVDQDCGEGRRCASNGCGRVCSPAQQREACEHQC*EDKDCGS 1200
C+ H+ C E + CG+ + P + CE +C + +DC
Sbjct: 428 RCSQRCHRGPCETCRQEVEKHCRCGKHTK---------RMPCHKPYLCETKCVKMRDC-Q 477
Query: 1201 GHQCVRKGCGHVCSPIPQVGICVTECNVDQDCGAGRRCTSNGCGRVCSPPQGGGLCVNRC 1380
HQC RK C C P DQ+CG C ++ C VC G C C
Sbjct: 478 KHQCRRKCCPGNCPP------------CDQNCGRTLGCRNHKCPSVCH----RGSCY-PC 520
Query: 1381 RGNWD--CGAGEECIRKGCGRVCSPAQEPVVGICVDQCQR----HWECGPRMRCVSTGCG 1542
D C G + CGR + C +QC R H + RC C
Sbjct: 521 PETVDVKCSCGNTKVTVPCGRERTTRPPK----CKEQCSRPPTCHHASQEKHRCHFGSCP 576
Query: 1543 HICSPAQDQVEQRPGKCP 1596
P Q +E+ CP
Sbjct: 577 PCHQPCQKVLEKCGHLCP 594
>ref|XP_003128713.1| PREDICTED: latent-transforming growth factor beta-binding protein
2-like [Sus scrofa].
Length = 1824
Score = 75.1 bits (183), Expect = 1e-13
Identities = 141/616 (22%), Positives = 215/616 (34%), Gaps = 102/616 (16%)
Frame = +1
Query: 151 CGAGRRCTS--NGCGRVCSPIQQREACEHQCREDRDC-----GGGHQCVRKGCGH--VCA 303
CG G C + +G +CSP + + C +D +C G +CV + + C
Sbjct: 859 CGPGT-CVNLPDGYKCICSPGYRLHPSQAYCTDDNECLRDPCKGRGRCVNRVGSYSCFCY 917
Query: 304 PVHQVDVGICVMECRVDQDCGEGRLCISNGCGRVC----------FPVRRREACE--HQC 447
P + + EC+ +C + LC C + + R+ C+ ++C
Sbjct: 918 PGYMLATSGATQECQDIDECEQPGLCSGGRCTNTVGSYHCECDQGYIMVRKGHCQDINEC 977
Query: 448 REDRDCGSGHQCVRRGCGHVCAPV---HQVDVGICV--TECRVDQDCGEGRLCISNGCGR 612
R C G +CV + C P ++ G CV EC C G G R
Sbjct: 978 RHPGTCPDG-RCVNSPGSYTCLPCEEGYRGQSGSCVDVNECLTPGVCAHGTCLNLEGSFR 1036
Query: 613 V-CFPGRREGCEHQ-CREDRDCGSGHQCVRKGCGHV--------CAPVHQVGICVTECNV 762
C PG + + C++ +C S C C + C + V T C
Sbjct: 1037 CSCEPGYEVTSDEKGCQDVDECASRASCPTGLCLNTEGSFTCSACESGYWVNEDGTACED 1096
Query: 763 DQDCGEGRQCTSNGCGRVCSPVQQEDVGICVTECKVDQDCGEGRRCTSNGCGRVCSPVQQ 942
+C C S C C+ DC EG R + G C V +
Sbjct: 1097 LDECAFPGVCPSGVCANTAGSFS----------CR---DCEEGYR--PSALGHTCEDVDE 1141
Query: 943 KEACEHQCR--EDRDCGSGHQCVRKGCGHVCAPVHQVDVG-IC--VTECKVDQDCGEGRR 1107
+ +C E ++ +QC+ C Q+ G +C V EC ++ C
Sbjct: 1142 CADPQSRCLGGECKNTAGSYQCL-------CPQGFQLTNGSVCEDVDECVGEEYCAPRGE 1194
Query: 1108 CASNGCGR---VCSPAQQREACEHQC*EDKDCGSGHQCVRKGCGH-------VCS----P 1245
C N G +C+P C + +C +C+R C + +C P
Sbjct: 1195 CL-NSHGSFFCLCAPGFASADGGTSCQDVDECAVTDRCLRGQCVNTEGSFNCLCETGFQP 1253
Query: 1246 IPQVGICVT----ECNVDQDCGAGRRCTSNGCGRV---CSP-----PQGGGLCVNRCRGN 1389
P+ CV E + D CGA R S G R C P P G G+ ++ C +
Sbjct: 1254 SPESEECVDIDKCEDSGDSACGAWRCENSPGSHRCILGCQPGFHVAPAGDGIDIDECAND 1313
Query: 1390 WDCGAGEECIR-KGCGR-VCSPAQEPVVG----ICVDQCQRHWE-CGPRMRCVSTGCGHI 1548
CG+ C +G R +C E + V++C+ CG + C + +
Sbjct: 1314 TVCGSHGYCDNTEGSFRCLCDQGFETSASGWDCVDVNECELMLAVCGTAL-CENVEGSFL 1372
Query: 1549 CSPAQD--QVEQRPGKC-PVLPKGTIGLCAEFCSGDDS-------CPSGQK--------- 1671
C A D + + + G C P L G E GD S C SGQK
Sbjct: 1373 CLCANDLEEYDAQEGHCRPRLAGGQ--SIPEASPGDRSPVPIRMECYSGQKGQPPCSSLL 1430
Query: 1672 ---------CCSHGCG 1692
CC+ G G
Sbjct: 1431 GRNTTQAECCCTQGTG 1446
>ref|NP_001186819.1| very low-density lipoprotein receptor [Sus scrofa].
Length = 845
Score = 72.4 bits (176), Expect = 9e-13
Identities = 109/434 (25%), Positives = 146/434 (33%), Gaps = 59/434 (13%)
Frame = +1
Query: 298 CAPVH-QVDVGICVM---ECRVDQDCGEG---RLCISNGCGRVCFPVRRREACEH--QCR 450
C P Q G C+ +C D+DC +G + C+ C F + + QC
Sbjct: 33 CEPSQFQCTNGRCITLLWKCDGDEDCADGSDEKNCVKKTCAESDFVCSNGQCVPNRWQCD 92
Query: 451 EDRDCGSGHQCVRRGCGHVCAPVHQVDVGICVTEC-----RVD--QDCGEGRLCISNGCG 609
D DC G C ++++ G T+C R D DC G CG
Sbjct: 93 GDPDCEDGSDESPEQCHMRTCRINEISCGARSTQCIPVSWRCDGENDCDSGE--DEENCG 150
Query: 610 RV--------CFPGRREGCEHQCREDRDCGSGH---QCVRKGCG--------HVCAPVHQ 732
+ C GR C DC G C CG C P+
Sbjct: 151 NITCSPDEFTCSSGRCISRNFVCNGQDDCSDGSDELDCAPPTCGAHEFQCSTSSCIPISW 210
Query: 733 VGICVTECNVDQDCGEGRQCTSNGCGR------VCSPVQ-QEDVGICVTE---CKVDQDC 882
V C+ D DC + + CGR C + Q G C+ + C D DC
Sbjct: 211 V------CDDDADCSDQSDESLEQCGRQPVIHTKCPASEIQCGSGECIHKKWRCDGDPDC 264
Query: 883 GEGRRCTSNGCGRVCSPVQ---QKEACEH---QCREDRDCGSGHQCVRKGCGHVCAPVHQ 1044
+G N R C P Q + +C H QC RDC G V
Sbjct: 265 KDGSD-EVNCPSRTCRPDQFECEDGSCIHGSRQCNGIRDCVDGSDEV------------- 310
Query: 1045 VDVGICVTECK-VDQDCGEGR-RCASNGCGRVCSPAQQREACEHQC*ED-KDCGSGHQCV 1215
CK V+Q G G+ +C S C + Q + C E K+C V
Sbjct: 311 --------NCKNVNQCLGPGKFKCRSGECIDISKVCNQEQDCRDWSDEPLKECHVNECLV 362
Query: 1216 RK-GCGHVCSPIPQVGICVTECNVDQDCGAG-RRCTSNGCGRVCSPPQGGGLCVNRC--- 1380
GC H+C + + EC DC AG CG + Q G+C C
Sbjct: 363 NNGGCSHICKDL----VIGYEC----DCAAGFELIDRKTCGDI-DECQNPGICSQICINL 413
Query: 1381 RGNWDCGAGEECIR 1422
+G + C EC R
Sbjct: 414 KGGYKC----ECSR 423
Score = 58.2 bits (139), Expect = 2e-08
Identities = 86/337 (25%), Positives = 119/337 (35%), Gaps = 72/337 (21%)
Frame = +1
Query: 772 CGEGRQCTSNGCGRV--CSPVQ-QEDVGICVT---ECKVDQDCGEG---RRCTSNGCGR- 921
C R+ + G GR C P Q Q G C+T +C D+DC +G + C C
Sbjct: 16 CLAPRESGATGAGRKAKCEPSQFQCTNGRCITLLWKCDGDEDCADGSDEKNCVKKTCAES 75
Query: 922 --VCSPVQQKEACEHQCREDRDCGSGHQCVRKGCGHVCAPVHQVDVGICVTE-------C 1074
VCS Q QC D DC G + C ++++ G T+ C
Sbjct: 76 DFVCSNGQCVPN-RWQCDGDPDCEDGSDESPEQCHMRTCRINEISCGARSTQCIPVSWRC 134
Query: 1075 KVDQDCGEGRRCASNGCGRV-CSPAQ---QREAC---EHQC*EDKDCGSGH---QCVRKG 1224
+ DC G CG + CSP + C C DC G C
Sbjct: 135 DGENDCDSGE--DEENCGNITCSPDEFTCSSGRCISRNFVCNGQDDCSDGSDELDCAPPT 192
Query: 1225 CG--------HVCSPIPQVGICVTECNVDQDCGAGRRCTSNGCGR------VCSPPQ--- 1353
CG C PI V C+ D DC + CGR C +
Sbjct: 193 CGAHEFQCSTSSCIPISWV------CDDDADCSDQSDESLEQCGRQPVIHTKCPASEIQC 246
Query: 1354 GGGLCVN---RCRGNWDCGAGEE---CIRKGC---------------GRVCSPAQEPVVG 1470
G G C++ RC G+ DC G + C + C R C+ ++ V G
Sbjct: 247 GSGECIHKKWRCDGDPDCKDGSDEVNCPSRTCRPDQFECEDGSCIHGSRQCNGIRDCVDG 306
Query: 1471 ICVDQCQRHWEC-GP-RMRCVSTGC---GHICSPAQD 1566
C+ +C GP + +C S C +C+ QD
Sbjct: 307 SDEVNCKNVNQCLGPGKFKCRSGECIDISKVCNQEQD 343
>ref|XP_001929552.1| PREDICTED: platelet endothelial aggregation receptor 1 [Sus scrofa].
Length = 1038
Score = 70.9 bits (172), Expect = 3e-12
Identities = 118/511 (23%), Positives = 146/511 (28%), Gaps = 84/511 (16%)
Frame = +1
Query: 169 CTSNGCGRVCSPIQQREACEHQCREDRDCGGGHQCVRKGCGHVCAPVHQVDVGICVMECR 348
C G +CS C ++ C G C R CAP + D C EC
Sbjct: 250 CPPGWMGTICSLPCPEGFHGPNCSQECRCHNGGLCDRFTGQCRCAPGYTGDR--CREECP 307
Query: 349 VD---QDCGEGRLCISNGCGRVCFPVRRREACEH-----QCREDRDCGSGHQCVRRGCGH 504
V QDC E C G CFP CEH +C E R C G +
Sbjct: 308 VGYFGQDCAEMCDCAP---GARCFPANGACLCEHGFTGDRCAE-RLCPDGLYGLSCQVPC 363
Query: 505 VCAPVHQVDVGICVTECRVDQDCGEGRLCISNGCGRVCFPGRREGCEHQ-----CREDRD 669
C P H EC C+ G C E C C+E
Sbjct: 364 TCDPEHSFSCHPMSGECS----------CLPGWAGLHC----NESCPQDTHGPGCQEHCL 409
Query: 670 CGSGHQCVRKGCGHVCAPVHQVGICVTECNVDQDCGEGRQCTSN-GCGRV--CSPVQQED 840
C G C CAP + C + C D G C+S C CSPV
Sbjct: 410 CLHGGVCQPDSGLCRCAPGYTGPHCASLCPPDS---YGVNCSSRCSCENAIACSPVD--- 463
Query: 841 VGICVTE--------------------CKVDQDCGEGRRCTSNGCGRVCSPVQQKEACEH 960
G C+ + C C G C+ C+P C+
Sbjct: 464 -GACICKEGWQRGNCSIPCPPGTWGFNCNASCQCAHGAACSPQTGACTCTPGWHGAHCQL 522
Query: 961 QCREDRDCGSGHQCVRK-GCGHV--CAPVH----------------QVDVGICVTECKVD 1083
C + + G C C H C PVH G T C
Sbjct: 523 PCPKGQ---FGEGCASHCDCDHSDGCDPVHGRCHCQAGWTGTRCHLPCPEGFWGTNCSNT 579
Query: 1084 QDCGEGRRCASNGCGRVCSPAQQREACEHQC*EDKDCGSGHQCVRKGCGHVCSPIPQVGI 1263
C G C VC+P + +C+ C + G +CV C + S P G
Sbjct: 580 CTCKNGGTCIPENGNCVCAPGFRGPSCQRPCQPGR---YGKRCVPCKCANHSSCHPSNGT 636
Query: 1264 CV--------------------TECNVDQDCGAGRRCTSNGCGRVCSPPQGGGLCVNRCR 1383
C C C G C C P G LC+ C
Sbjct: 637 CYCLAGWTGPDCSQPCPLGHWGANCAQLCQCRHGGTCHPQDGSCFCPPGWIGHLCLEGCP 696
Query: 1384 GNW---------DCGAGEECIRKGCGRVCSP 1449
CG+GE C + VC P
Sbjct: 697 PGMFGANCSQPCQCGSGERCHPETGACVCPP 727
Score = 65.1 bits (157), Expect = 1e-10
Identities = 137/593 (23%), Positives = 176/593 (29%), Gaps = 69/593 (11%)
Frame = +1
Query: 115 GICVTECKVDQDCGAGRRCTSNG-------------CGRVCSPIQQREACEHQCREDR-D 252
G+ +C +CG C C + CSP + AC++ C+ R
Sbjct: 138 GVWGPQCDKPCNCGNSSSCDPKSGACSCPPGLQPPHCLQPCSPGRYGPACQYSCQCHRAP 197
Query: 253 CG---GGHQCVRKGCGHVCAPVHQVDVGICVMECRVDQDCGEGRL---------CISNGC 396
C G C + G C + C C G + C
Sbjct: 198 CDPQTGACLCPPERTGPSCE--ESCSLSTFGFSCPSIPPCHNGGVFQASQGSCSCPPGWM 255
Query: 397 GRVCFPVRRREACEHQCREDRDCGSGHQCVRRGCGHVCAPVHQVDVGICVTECRV---DQ 567
G +C C ++ C +G C R CAP + D C EC V Q
Sbjct: 256 GTICSLPCPEGFHGPNCSQECRCHNGGLCDRFTGQCRCAPGYTGD--RCREECPVGYFGQ 313
Query: 568 DCGEGRLCISNGCGRVCFPGRREG-CEH-----QCREDRDCGSGHQCVRKGCGHVCAPVH 729
DC E C G CFP CEH +C E R C G + C P H
Sbjct: 314 DCAEMCDCAP---GARCFPANGACLCEHGFTGDRCAE-RLCPDGLYGLSCQVPCTCDPEH 369
Query: 730 QVGI--CVTECN-----VDQDCGEG--RQCTSNGCGRVC----SPVQQEDVGICVTECKV 870
EC+ C E + GC C V Q D G+C
Sbjct: 370 SFSCHPMSGECSCLPGWAGLHCNESCPQDTHGPGCQEHCLCLHGGVCQPDSGLC------ 423
Query: 871 DQDCGEGRRCTSNGCGRVCSPVQQKEACEHQCREDRD-----------CGSGHQCVRKGC 1017
C G T C +C P C +C + C G Q R C
Sbjct: 424 --RCAPG--YTGPHCASLCPPDSYGVNCSSRCSCENAIACSPVDGACICKEGWQ--RGNC 477
Query: 1018 GHVCAPVHQVDVGICVTECKVDQDCGEGRRCASNGCGRVCSPAQQREACEHQC*EDKDCG 1197
C P G C C G C+ C+P C+ C + + G
Sbjct: 478 SIPCPP------GTWGFNCNASCQCAHGAACSPQTGACTCTPGWHGAHCQLPCPKGQ-FG 530
Query: 1198 SGHQCVRKGCGHVCSPIPQVGICVTECNVDQDCGA----GR-RCTSNGCGRVCSPPQGGG 1362
G C + C+ D G GR C + G C P G
Sbjct: 531 EG--------------------CASHCDCDHSDGCDPVHGRCHCQAGWTGTRCHLPCPEG 570
Query: 1363 LCVNRCRGNWDCGAGEECIRKGCGRVCSPAQEPVVGICVDQCQRHWECGP-RMRCVSTGC 1539
C C G CI + VC+P G CQR + G RCV C
Sbjct: 571 FWGTNCSNTCTCKNGGTCIPENGNCVCAP------GFRGPSCQRPCQPGRYGKRCVPCKC 624
Query: 1540 GH--ICSPAQDQVEQRPGKCPVLPKGTIGLCAEFCS-GDDSCPSGQKC-CSHG 1686
+ C P+ G C L T C++ C G Q C C HG
Sbjct: 625 ANHSSCHPSN-------GTCYCLAGWTGPDCSQPCPLGHWGANCAQLCQCRHG 670
Score = 61.2 bits (147), Expect = 2e-09
Identities = 104/443 (23%), Positives = 134/443 (30%), Gaps = 27/443 (6%)
Frame = +1
Query: 121 CVTECKVDQDCGAGRRCTSNGCGRVCSPIQQREACEHQCREDRDCGGGHQCVRKGCGHVC 300
C C D + S C C P C C +D G + G VC
Sbjct: 359 CQVPCTCDPEHSFSCHPMSGECS--CLPGWAGLHCNESCPQDTHGPGCQEHCLCLHGGVC 416
Query: 301 APVHQVDVGICVMECRVDQDCGEGRLCISNGCGRVCFPVRRREACEHQCREDRD------ 462
P D G+C C G C +C P C +C +
Sbjct: 417 QP----DSGLC--------RCAPGYT--GPHCASLCPPDSYGVNCSSRCSCENAIACSPV 462
Query: 463 -----CGSGHQCVRRGCGHVCAPVHQVDVGICVTECRVDQDCGEGRLCISNGCGRVCFPG 627
C G Q R C C P G C C G C C PG
Sbjct: 463 DGACICKEGWQ--RGNCSIPCPP------GTWGFNCNASCQCAHGAACSPQTGACTCTPG 514
Query: 628 RREG-CEHQCREDRDCGSGHQCVRK-GCGHV--CAPVH-----QVGICVTECNVDQDCGE 780
C+ C + + G C C H C PVH Q G T C++ C E
Sbjct: 515 WHGAHCQLPCPKGQ---FGEGCASHCDCDHSDGCDPVHGRCHCQAGWTGTRCHLP--CPE 569
Query: 781 GRQCTSNGCGRVCSPVQQEDVGICVTECKVDQDCGEGRRCTSNGCGRVCSPVQQKEACEH 960
G T+ C C+ C G C VC+P + +C+
Sbjct: 570 GFWGTN--CSNTCT-------------------CKNGGTCIPENGNCVCAPGFRGPSCQR 608
Query: 961 QCREDRDCGSGHQCVRKGCGH--VCAPVHQVDVGICV-----TECKVDQDCGEGRRCASN 1119
C+ R G +CV C + C P + G C T Q C G A+
Sbjct: 609 PCQPGR---YGKRCVPCKCANHSSCHPSN----GTCYCLAGWTGPDCSQPCPLGHWGAN- 660
Query: 1120 GCGRVCSPAQQREACEHQC*EDKDCGSGHQCVRKGCGHVCSPIPQVGICVTECNVDQDCG 1299
C ++C + C Q D C C GH+C G+ C+ CG
Sbjct: 661 -CAQLCQ-CRHGGTCHPQ---DGSCF----CPPGWIGHLCLEGCPPGMFGANCSQPCQCG 711
Query: 1300 AGRRCTSNGCGRVCSPPQGGGLC 1368
+G RC VC P G C
Sbjct: 712 SGERCHPETGACVCPPGHSGAPC 734
Score = 53.1 bits (126), Expect = 5e-07
Identities = 89/379 (23%), Positives = 116/379 (30%), Gaps = 16/379 (4%)
Frame = +1
Query: 616 CFPGRREGCEH-QCREDRDCGSGHQCVRKGCGHVCAPVHQVGICVTECNVDQDCGEGRQC 792
C P + C H +C C QCV+ G C+ G+ +C+ +CG C
Sbjct: 101 CVPLCSQECVHGRCVAPNQC----QCVQDWRGDDCSSACAPGVWGPQCDKPCNCGNSSSC 156
Query: 793 TSNGCGRVCSPVQQEDVGICVTEC---KVDQDCGEGRRCTSNGC-----GRVCSPVQQKE 948
C P Q C+ C + C +C C +C P +
Sbjct: 157 DPKSGACSCPPGLQPP--HCLQPCSPGRYGPACQYSCQCHRAPCDPQTGACLCPPERTGP 214
Query: 949 ACEHQCREDR---DCGSGHQCVRKGCGHVCAPVHQVDVGICVTECKVDQDCGEGRRCASN 1119
+CE C C S C G V Q G C C
Sbjct: 215 SCEESCSLSTFGFSCPSIPPCHNGG-------VFQASQGSC--------------SCPPG 253
Query: 1120 GCGRVCSPAQQREACEHQC*EDKDCGSGHQCVRKGCGHVCSPIPQVGICVTECNV---DQ 1290
G +CS C ++ C +G C R C+P C EC V Q
Sbjct: 254 WMGTICSLPCPEGFHGPNCSQECRCHNGGLCDRFTGQCRCAPGYTGDRCREECPVGYFGQ 313
Query: 1291 DCGAGRRCTSNGCGRVCSPPQGGGLCVNRCRGNWDCGAGEECIRKGCGRVCSPAQEPVVG 1470
DC C G C P G LC + G+ C + C + + G
Sbjct: 314 DCAEMCDCAP---GARCFPANGACLCEHGF-------TGDRCAERLC-------PDGLYG 356
Query: 1471 ICVDQCQRHWECGPRMRCVSTGCGHICSPAQDQVEQRPGKCPVLPKGTIGL-CAEFCSGD 1647
+ CQ C P C P G+C LP G GL C E C D
Sbjct: 357 L---SCQVPCTCDPEH-------SFSCHPMS-------GECSCLP-GWAGLHCNESCPQD 398
Query: 1648 DSCPSGQKCCSHGCGHSCQ 1704
P Q+ C G CQ
Sbjct: 399 THGPGCQEHCLCLHGGVCQ 417
>ref|XP_003354310.1| PREDICTED: multiple epidermal growth factor-like domains protein 10
[Sus scrofa].
Length = 1152
Score = 70.5 bits (171), Expect = 3e-12
Identities = 151/636 (23%), Positives = 193/636 (30%), Gaps = 110/636 (17%)
Frame = +1
Query: 133 CKVDQDCGAGRRCTSNGCGRVCSPIQQREACEHQCREDR---DCGGGHQCVRKG-CGHVC 300
C + C G C + CSP E C+ +C C QCV G C HV
Sbjct: 214 CSQECQCHNGGTCDAATGQCHCSPGYTGERCQDECPVGTYGVGCAETCQCVNGGKCYHVS 273
Query: 301 APVHQVDVGICVMECRVDQDCGEGRLCISN------------------------------ 390
G C+ E D E RLC
Sbjct: 274 --------GSCLCEAGFAGDRCEARLCPEGLYGIKCDKHCPCHPDNTHSCHPMSGECACK 325
Query: 391 ------GCGRVCFPVRRREACEH--QCREDRDCGS------------GHQCVRR------ 492
C C P EAC+ C+ DC S G C
Sbjct: 326 PGWSGLYCNETCSPGFYGEACQQICSCQNGADCDSVTGKCTCAPGFKGIDCSTPCSLGTY 385
Query: 493 --------GCGH--VCAPV----------HQVDVGICVTE------CRVDQDCGEGRLCI 594
GC + +C+PV H VD I C + C G C
Sbjct: 386 GVNCSSLCGCKNDAMCSPVDGSCTCKAGWHGVDCSISCPSGTWGFGCNLTCQCLNGGACN 445
Query: 595 SNGCGRVCFPG-RREGCEHQCREDRDCGSGHQCVRKGCGHV--CAPVHQVGICV---TEC 756
+ C PG R E CE C +D G H R C H C P C+ +
Sbjct: 446 TLDGTCTCAPGWRGEKCEFPC-QDGTYGL-HCAERCDCSHADGCHPTTGHCRCLPGWSGV 503
Query: 757 NVDQDCGEGR---QCTSNGC----GRVCSPVQQEDVGICVTECKVDQDCGEGRRCTSNGC 915
+ D C EGR C S C G CSP D GIC +C G R T+ C
Sbjct: 504 HCDSVCAEGRWGPNC-SLPCYCKNGASCSP----DDGIC--------ECAPGFRGTT--C 548
Query: 916 GRVCSPVQQKEACEHQCREDRDCGSGHQCVRKGCGHVCAPVHQVDVGICVTECKVDQDCG 1095
R+CSP C C + C H P H + G+C DC
Sbjct: 549 QRICSPGFYGHRCSQTCPQ--------------CVHSSGPCHHI-TGLC--------DCL 585
Query: 1096 EGRRCASNGCGRVCSPAQQREACEHQC*EDKDCGSGHQCVRKGCGHVCSPIPQVGICVTE 1275
G A C VC + + C C C G C+PI
Sbjct: 586 PGFTGAL--CNEVCPSGRFGKNCAGIC----------TCTNNG---TCNPI--------- 621
Query: 1276 CNVDQDCGAGRRCTSNGCGRVCSPPQGGGLCVNRCRGNWDCGAGEECIRKGCGRVCSPAQ 1455
D+ C + C + C P G C++ C +C G C C+P
Sbjct: 622 ---DRSCQCYPGWIGSDCSQPCPPAHWGPNCIHTC----NCHNGAFCSAYDGECKCTPGW 674
Query: 1456 EPVVGICVDQCQRHW---ECGPRMRCVS-TGCGHICSPAQDQVEQRPGKC-PVLPKGTIG 1620
+ C +C + +C RC + C HI + C P GT G
Sbjct: 675 TGL--YCTQRCPLGFYGKDCALICRCQNGADCDHISGQCTCRTGFMGKHCEQKCPAGTYG 732
Query: 1621 L-CAEFCS--GDDSCP--SGQKCCSHGC-GHSCQTA 1710
C + C + +C +G CS G G C A
Sbjct: 733 YGCRQICDCLNNSTCDHITGTCYCSPGWKGARCDQA 768
>ref|NP_001116619.1| neurogenic locus notch homolog protein 4 [Sus scrofa].
Length = 1994
Score = 69.3 bits (168), Expect = 7e-12
Identities = 154/621 (24%), Positives = 199/621 (32%), Gaps = 95/621 (15%)
Frame = +1
Query: 142 DQDCGAGRRCTSNGCGRVCSPIQQREACEHQCREDRDCGGGHQCVRKGCGHVCAPVHQVD 321
DQ+ A C G C+P + C H GH C R C VC D
Sbjct: 640 DQEDKAHCLCPDGSPG--CAPAEDNCTCHH----------GH-CQRSSC--VC------D 678
Query: 322 VGICVMECRVDQDCGEGRLCISNGC--GRVCFPVRRREACE-------HQCRED------ 456
VG EC D + G CIS C G C P C CRE+
Sbjct: 679 VGWTGPEC--DAELGG---CISTPCAHGGTCHPQPFGYNCTCPTGYTGPTCREEVTACHS 733
Query: 457 RDCGSGHQCVRRGCGH--VCAPVH-----QVDVGICVTECRVDQDCGEGRLCISN----G 603
C +G C G+ C P H Q + C + C G C++
Sbjct: 734 APCLNGGSCSPSPGGYSCTCPPSHTGLHCQTSIDHCASA-----PCLNGGTCVNRPGAPS 788
Query: 604 CGRVCFPG----RREG------CEHQCREDRDCGSGHQCVRKGCGHVCAPVHQVGICVTE 753
C +C PG R EG + CR C G Q R C +C P + G C T
Sbjct: 789 C--LCAPGFQGPRCEGRVRPSCADSPCRNRATCQDGPQGPR--C--LCPPGYTGGSCQTL 842
Query: 754 CN--VDQDCGEGRQCTSNGCGRVCSPVQQEDVGIC---VTECK---------VDQDCGEG 891
+ + C +C G C +Q +C ++ C+ V C G
Sbjct: 843 MDFCAQKPCPRNSRCLQTGPSYQCLCLQGWTGPLCNLPLSSCQKAALSQGAEVSSLCQNG 902
Query: 892 RRCTSNGCGRVC--SPVQQKEACE---HQCREDRDCGSGHQCVRKGCGHVCAPVHQVDVG 1056
C NG C SP Q C+ H C E R C G CV + G++C Q G
Sbjct: 903 GICVDNGPSYFCHCSPGFQGSMCQDRVHPC-ESRPCQHGATCVAQPNGYLC----QCAPG 957
Query: 1057 ICVTECKVDQDCGEGRRCASNGCGR--------VCSPAQQREACEHQC*E--DKDCG--S 1200
C + D + + C ++G C P CE E D+ C
Sbjct: 958 YSGQNCSEEPDACQSQPCHNHGTCTPKPGGFHCACPPGFVGLRCEGDVDECLDRPCHPTG 1017
Query: 1201 GHQCVRKGCGHVCSPIPQVGICVTECNVDQDCGAGRRCTSNG-CGRVCSPPQGGGL-CVN 1374
C C +P G C V+ D + C+ G C PP G C
Sbjct: 1018 TAACHSLANAFYCQCLP--GHTGQWCEVEIDPCQSQPCSHGGSCETTAGPPPGYTCHCPQ 1075
Query: 1375 RCRGNWDCGAGEECIRKGC--GRVCSPAQEP--------VVGICVDQCQRHWE---CGPR 1515
G C C G +C P+ +P + G C CGP
Sbjct: 1076 GFEGPTCSHRAPSCGLHHCHHGGLCLPSPKPGFPPRCACLNGYGGPDCLTPPTPPGCGPP 1135
Query: 1516 MRCVSTG-CGHI-----------CSPAQDQVE-QRPGKCPVLPKGTIGLCAEFCSGDDSC 1656
C+ G C C P+ QRPG +G G C CSG
Sbjct: 1136 SPCLHNGSCSETPGLGGPGFRCSCPPSSPGPRCQRPGAKGCEGRGGDGACDAGCSG---- 1191
Query: 1657 PSGQKCCSHGCGHSCQTAVPD 1719
P G + G C VPD
Sbjct: 1192 PGG-----NWDGGDCSLGVPD 1207
Score = 63.9 bits (154), Expect = 3e-10
Identities = 145/597 (24%), Positives = 190/597 (31%), Gaps = 68/597 (11%)
Frame = +1
Query: 130 ECKVDQD----CGAGRRC--TSNGCGRVCSPIQQREACEHQCRE--DRDCGGGHQCVRKG 285
EC++ Q C G C T +C P CE E + C G C+
Sbjct: 433 ECQMAQQGPSPCEHGGSCLNTPGSFECLCPPGYTGSRCEADHNECLSQPCHPGSTCLDLL 492
Query: 286 CGHVCAPVHQVDVGICVME--------CRVDQDCGEGRLCISNGCGRVCFPVRRREACEH 441
C ++ +C +E C DC + + NG VC P CE
Sbjct: 493 ATFHCLCPPGLEGRLCEVETDECASAPCLNQADCHD----LPNGFRCVCQPGFTGPRCEE 548
Query: 442 QCREDRD--CGSGHQCVRRGCGHVCAPVHQVDVGICVTECR--VDQDCGEGRLCISNGCG 609
E R C +G QC + C + + C TE + C G C+
Sbjct: 549 DINECRSSPCANGGQCQDQPGSFHCECLPGFEGPRCQTEVDECLSSPCPSGASCLDLPGA 608
Query: 610 RVCF-PGRREG--CEHQCREDRDCGSGHQCV-RKGCGHVCAPVHQVGICVTECNVDQDCG 777
+C P G CE C S +C ++ H P G E N C
Sbjct: 609 FLCLCPSGFTGHLCESPLCAPNLCQSKQKCQDQEDKAHCLCPDGSPGCAPAEDNCT--CH 666
Query: 778 EGRQCTSNGCGRVCSPVQQEDVGICVTECKVDQDCGEGRRCTSNGC--GRVCSPVQQKEA 951
G C + C VC DVG EC D + G C S C G C P
Sbjct: 667 HGH-CQRSSC--VC------DVGWTGPEC--DAELGG---CISTPCAHGGTCHPQPFGYN 712
Query: 952 CE-------HQCRED------RDCGSGHQCVRKGCGH--VCAPVH-----QVDVGICVTE 1071
C CRE+ C +G C G+ C P H Q + C +
Sbjct: 713 CTCPTGYTGPTCREEVTACHSAPCLNGGSCSPSPGGYSCTCPPSHTGLHCQTSIDHCASA 772
Query: 1072 CKVDQDCGEGRRCASN----GCGRVCSPAQQREACEHQ---------C*EDKDCGSGHQC 1212
C G C + C +C+P Q CE + C C G Q
Sbjct: 773 -----PCLNGGTCVNRPGAPSC--LCAPGFQGPRCEGRVRPSCADSPCRNRATCQDGPQG 825
Query: 1213 VRKGCGHVCSPIPQVGICVTECN--VDQDCGAGRRCTSNGCGRVCSPPQG--GGLCVNRC 1380
R C +C P G C T + + C RC G C QG G LC
Sbjct: 826 PR--C--LCPPGYTGGSCQTLMDFCAQKPCPRNSRCLQTGPSYQCLCLQGWTGPLC---- 877
Query: 1381 RGNWDCGAGEECIRKGCGRVCSPAQEPVVGICVDQCQRHW-ECGPRMRCVSTGCGHICSP 1557
N + ++ V S Q GICVD ++ C P + G +C
Sbjct: 878 --NLPLSSCQKAALSQGAEVSSLCQNG--GICVDNGPSYFCHCSPGFQ------GSMCQD 927
Query: 1558 AQDQVEQRP----GKCPVLPKGTIGLCAEFCSGDDSCPSGQKCCSHGCGHSCQTAVP 1716
E RP C P G + CA SG + C S C H+ T P
Sbjct: 928 RVHPCESRPCQHGATCVAQPNGYLCQCAPGYSGQNCSEEPDACQSQPC-HNHGTCTP 983
Database: RefSeq49_SP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 11,343,932
Number of sequences in database: 24,897
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 24897
Number of Hits to DB: 60,832,499
Number of extensions: 2233150
Number of successful extensions: 9831
Number of sequences better than 1.0e-05: 49
Number of HSP's gapped: 9012
Number of HSP's successfully gapped: 99
Length of query: 663
Length of database: 11,343,932
Length adjustment: 105
Effective length of query: 558
Effective length of database: 8,729,747
Effective search space: 4871198826
Effective search space used: 4871198826
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ITT01_0011_G11
(1989 letters)
Database: Sscrofa_10.2.fasta
4582 sequences; 2,808,509,378 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|GL892301.1| Sus scrofa unplaced genomic scaffold chrU_scaffol... 196 3e-47
Sscrofa_Chr12 192 5e-46
>gb|GL892301.1| Sus scrofa unplaced genomic scaffold chrU_scaffold118
Length = 158
Score = 196 bits (99), Expect = 3e-47
Identities = 99/99 (100%)
Strand = Plus / Minus
Query: 1864 tctagaataacttggcttaagggttgaattctggcaattgtttaaggaatagtgcttgca 1923
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 158 tctagaataacttggcttaagggttgaattctggcaattgtttaaggaatagtgcttgca 99
Query: 1924 aaggatccttcttctgaataaaacgacttctctggcatt 1962
|||||||||||||||||||||||||||||||||||||||
Sbjct: 98 aaggatccttcttctgaataaaacgacttctctggcatt 60
>Sscrofa_Chr12
|| Length = 63588571
Score = 192 bits (97), Expect = 5e-46
Identities = 103/105 (98%)
Strand = Plus / Minus
Query: 5 ttaccaccgaccagtcctcagccggcaacatgaagctgggtggcctctgcctcctgctcc 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 41126829 ttaccaccgaccagtcctcagccggcaacatgaagctgggtggcctctgcctcctgctcc 41126770
Query: 65 tcctcgccgtccttctcaccctcaatgcagagctccaggcagttg 109
|||||||||||||||||||||||||||||||| |||| |||||||
Sbjct: 41126769 tcctcgccgtccttctcaccctcaatgcagagttccaagcagttg 41126725
Database: Sscrofa_10.2.fasta
Posted date: Nov 16, 2011 10:34 AM
Number of letters in database: 2,808,509,378
Number of sequences in database: 4582
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4582
Number of Hits to DB: 54,856,606
Number of extensions: 394
Number of successful extensions: 394
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 394
Number of HSP's successfully gapped: 2
Length of query: 1989
Length of database: 2,808,509,378
Length adjustment: 22
Effective length of query: 1967
Effective length of database: 2,808,408,574
Effective search space: 5524139665058
Effective search space used: 5524139665058
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 18 (36.2 bits)
S2: 30 (60.0 bits)